RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7238
         (123 letters)



>d1pd0a3 c.62.1.2 (A:301-552) Sec24 {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 252

 Score = 25.7 bits (56), Expect = 1.4
 Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 7/39 (17%)

Query: 66  YIMAFLVRVSGGEPQLGLSPFIYYPDYDYENSRQMFPFR 104
             ++ L R + G+         +YP +  +N   +  F 
Sbjct: 210 ASLSNLSRFTAGQ-------THFYPGFSGKNPNDIVKFS 241


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.139    0.446 

Gapped
Lambda     K      H
   0.267   0.0630    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 470,293
Number of extensions: 19053
Number of successful extensions: 45
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 3
Length of query: 123
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 48
Effective length of database: 1,377,846
Effective search space: 66136608
Effective search space used: 66136608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 47 (22.1 bits)