Query psy724
Match_columns 92
No_of_seqs 115 out of 1016
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 21:40:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy724.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/724hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v26_A Myosin VI; calmodulin-b 100.0 3.9E-38 1.3E-42 248.5 6.4 89 3-91 446-538 (784)
2 1lkx_A Myosin IE heavy chain; 100.0 3.7E-38 1.3E-42 246.1 6.0 89 3-91 380-472 (697)
3 4anj_A Unconventional myosin-V 100.0 2.5E-37 8.7E-42 249.0 6.4 89 3-91 450-542 (1052)
4 1w7j_A Myosin VA; motor protei 100.0 3.2E-37 1.1E-41 243.5 6.5 88 3-91 431-522 (795)
5 1w9i_A Myosin II heavy chain; 100.0 5.5E-37 1.9E-41 241.4 6.4 89 3-91 448-542 (770)
6 4db1_A Myosin-7; S1DC, cardiac 100.0 4.2E-37 1.4E-41 242.4 5.3 88 3-91 455-547 (783)
7 1kk8_A Myosin heavy chain, str 100.0 9.5E-37 3.3E-41 241.7 5.5 88 3-91 454-546 (837)
8 2dfs_A Myosin-5A; myosin-V, in 100.0 2.1E-36 7.1E-41 244.5 5.9 88 3-91 431-522 (1080)
9 2ycu_A Non muscle myosin 2C, a 100.0 3.2E-36 1.1E-40 242.0 5.9 89 3-91 427-522 (995)
10 1g8x_A Myosin II heavy chain f 100.0 7.1E-36 2.4E-40 240.2 6.4 89 3-91 448-542 (1010)
11 1i84_S Smooth muscle myosin he 100.0 1E-35 3.5E-40 241.7 5.3 89 3-91 458-553 (1184)
12 1y4m_A HERV-FRD_6P24.1 proviru 44.1 5.6 0.00019 21.2 0.3 26 59-84 25-50 (53)
13 1mof_A Moloney murine leukemia 39.7 6.8 0.00023 21.0 0.2 26 59-84 27-52 (55)
14 3t5d_A Septin-7; GTP-binding p 23.2 91 0.0031 20.6 3.7 30 4-34 66-101 (274)
No 1
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=3.9e-38 Score=248.45 Aligned_cols=89 Identities=36% Similarity=0.680 Sum_probs=87.0
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCcccccccCChHHHHHHHhcCCCcccccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~~~li~~~p~Gll~lL 78 (92)
++||||||||| .||||||||||||||||++|++++|..||++|.+|||+|..++|.||++|+|||++||.|||++|
T Consensus 446 ~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslL 525 (784)
T 2v26_A 446 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDIL 525 (784)
T ss_dssp EEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHH
T ss_pred ceeeecccCCcccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccHHHHH
Confidence 58999999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhccCcCCCC
Q psy724 79 DDQAKLLMAYETL 91 (92)
Q Consensus 79 dee~~~p~~td~~ 91 (92)
||||++|++||++
T Consensus 526 DEe~~~p~~tD~~ 538 (784)
T 2v26_A 526 DEENRLPQPSDQH 538 (784)
T ss_dssp HHHHHSSSCCHHH
T ss_pred HHHhcCCCCChHH
Confidence 9999999999975
No 2
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=3.7e-38 Score=246.13 Aligned_cols=89 Identities=39% Similarity=0.703 Sum_probs=87.0
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCcccccccCChHHHHHHHhcCCCcccccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~~~li~~~p~Gll~lL 78 (92)
++||||||||| .||||||||||||||||++|++++|..||++|.+|||+|..++|.||++|+|||++||.|||++|
T Consensus 380 ~~IGvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslL 459 (697)
T 1lkx_A 380 PVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLL 459 (697)
T ss_dssp CEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHH
T ss_pred eeEEeeccccccccCcCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhh
Confidence 68999999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhccCcCCCC
Q psy724 79 DDQAKLLMAYETL 91 (92)
Q Consensus 79 dee~~~p~~td~~ 91 (92)
||||++|++||++
T Consensus 460 DEec~~p~~tD~~ 472 (697)
T 1lkx_A 460 DEACLIAKSTDQT 472 (697)
T ss_dssp HHHHHSTTCCHHH
T ss_pred HHhhCCCCCChHH
Confidence 9999999999975
No 3
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=2.5e-37 Score=249.04 Aligned_cols=89 Identities=36% Similarity=0.680 Sum_probs=87.1
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCcccccccCChHHHHHHHhcCCCcccccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~~~li~~~p~Gll~lL 78 (92)
++||||||||| .||||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++|
T Consensus 450 ~~IGILDI~GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lL 529 (1052)
T 4anj_A 450 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDIL 529 (1052)
T ss_dssp EEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHH
T ss_pred ceEEEEecCCCcccccCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHH
Confidence 58999999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhccCcCCCC
Q psy724 79 DDQAKLLMAYETL 91 (92)
Q Consensus 79 dee~~~p~~td~~ 91 (92)
||||++|++||++
T Consensus 530 DEe~~~p~~tD~~ 542 (1052)
T 4anj_A 530 DEENRLPQPSDQH 542 (1052)
T ss_dssp HHHHHSSSCCHHH
T ss_pred HHHhcCCCCcHHH
Confidence 9999999999975
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=3.2e-37 Score=243.45 Aligned_cols=88 Identities=48% Similarity=0.841 Sum_probs=85.5
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCcccccccCChHHHHHHHhcCCCcccccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~~~li~~~p~Gll~lL 78 (92)
++||||||||| .||||||||||||||||++|++++|..||++|.+|||+|..++|.||++|+|||++| .|||++|
T Consensus 431 ~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslL 509 (795)
T 1w7j_A 431 SFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLL 509 (795)
T ss_dssp EEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHH
T ss_pred ceEEeeccCcccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhh
Confidence 58999999999 899999999999999999999999999999999999999999999999999999976 9999999
Q ss_pred hHhhhccCcCCCC
Q psy724 79 DDQAKLLMAYETL 91 (92)
Q Consensus 79 dee~~~p~~td~~ 91 (92)
||||++|++||++
T Consensus 510 DEec~~p~~tD~~ 522 (795)
T 1w7j_A 510 DEECKMPKGSDDT 522 (795)
T ss_dssp HHHHTSTTCCHHH
T ss_pred hhhccCCCCChHH
Confidence 9999999999975
No 5
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=5.5e-37 Score=241.36 Aligned_cols=89 Identities=44% Similarity=0.858 Sum_probs=85.7
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCccccccc-CChHHHHHHHhcC-CCcccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK-PNGLLC 76 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~~~li~~~-p~Gll~ 76 (92)
++||||||||| .||||||||||||||||++|++++|..||++|.+|||+|..++| .||++|+|||+++ |.|||+
T Consensus 448 ~~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~Gils 527 (770)
T 1w9i_A 448 YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILA 527 (770)
T ss_dssp EEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHH
T ss_pred CeeeeccCccccccccCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhh
Confidence 58999999999 89999999999999999999999999999999999999999999 5999999999974 999999
Q ss_pred cchHhhhccCcCCCC
Q psy724 77 VLDDQAKLLMAYETL 91 (92)
Q Consensus 77 lLdee~~~p~~td~~ 91 (92)
+|||||++|++||++
T Consensus 528 lLDEec~~p~~tD~~ 542 (770)
T 1w9i_A 528 LLDEQSVFPNATDNT 542 (770)
T ss_dssp HHHHHHSSSSCCHHH
T ss_pred hhhhhhCCCCCChHH
Confidence 999999999999975
No 6
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=4.2e-37 Score=242.40 Aligned_cols=88 Identities=42% Similarity=0.832 Sum_probs=84.0
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCccccccc-CChHHHHHHHhcCCCccccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCV 77 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~~~li~~~p~Gll~l 77 (92)
++||||||||| .||||||||||||||||++|++++|..||++|.+|||+|..++| .||++|+|||++ |.|||++
T Consensus 455 ~~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~l 533 (783)
T 4db1_A 455 YFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSI 533 (783)
T ss_dssp EEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHH
T ss_pred ceEEEeccccccccccCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHHHHHHhC-CCchHhh
Confidence 68999999999 89999999999999999999999999999999999999999999 599999999995 8999999
Q ss_pred chHhhhccCcCCCC
Q psy724 78 LDDQAKLLMAYETL 91 (92)
Q Consensus 78 Ldee~~~p~~td~~ 91 (92)
|||||++|++||++
T Consensus 534 LDEec~~p~~tD~t 547 (783)
T 4db1_A 534 LEEECMFPKATDMT 547 (783)
T ss_dssp HCC-TTCTTCCHHH
T ss_pred hhHHhcCCCCCHHH
Confidence 99999999999975
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=9.5e-37 Score=241.74 Aligned_cols=88 Identities=44% Similarity=0.849 Sum_probs=85.2
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCccccccc-CChHHHHHHHhcCCCccccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCV 77 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~~~li~~~p~Gll~l 77 (92)
++||||||||| .||||||||||||||||++|++++|..||++|.+|||+|..++| .||++|+|||++ |.|||++
T Consensus 454 ~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlsl 532 (837)
T 1kk8_A 454 YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSI 532 (837)
T ss_dssp EEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHH
T ss_pred ceEEEEecCCccccccccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHH
Confidence 58999999999 89999999999999999999999999999999999999999999 599999999996 9999999
Q ss_pred chHhhhccCcCCCC
Q psy724 78 LDDQAKLLMAYETL 91 (92)
Q Consensus 78 Ldee~~~p~~td~~ 91 (92)
|||||++|++||++
T Consensus 533 LDEec~~p~~tD~t 546 (837)
T 1kk8_A 533 LEEECMFPKADDKS 546 (837)
T ss_dssp HHHHTTCTTCCHHH
T ss_pred HHHHhcCCCCChHH
Confidence 99999999999975
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=2.1e-36 Score=244.51 Aligned_cols=88 Identities=48% Similarity=0.841 Sum_probs=85.5
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCcccccccCChHHHHHHHhcCCCcccccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~~~li~~~p~Gll~lL 78 (92)
+|||||||||| .|||||||||||||+||++|++++|..++++|.+|||+|..++|.||++|+|||+++ .|||++|
T Consensus 431 ~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lL 509 (1080)
T 2dfs_A 431 SFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLL 509 (1080)
T ss_dssp EEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHH
T ss_pred ceEEeeccCCccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHHHHHhcC-Cceeeec
Confidence 58999999999 899999999999999999999999999999999999999999999999999999975 9999999
Q ss_pred hHhhhccCcCCCC
Q psy724 79 DDQAKLLMAYETL 91 (92)
Q Consensus 79 dee~~~p~~td~~ 91 (92)
||||++|++||++
T Consensus 510 dee~~~p~~tD~~ 522 (1080)
T 2dfs_A 510 DEECKMPKGSDDT 522 (1080)
T ss_dssp HHHTTSTTCCHHH
T ss_pred cccccCCCCChHH
Confidence 9999999999975
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=3.2e-36 Score=241.96 Aligned_cols=89 Identities=43% Similarity=0.804 Sum_probs=85.9
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCccccccc-CChHHHHHHHhc--CCCccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPNGLL 75 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~~~li~~--~p~Gll 75 (92)
++||||||||| .||||||||||||||||++|++++|..|+++|.+|||+|..++| .||++|+|||++ +|.|||
T Consensus 427 ~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil 506 (995)
T 2ycu_A 427 SFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLL 506 (995)
T ss_dssp EEEEEEECCCBCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHH
T ss_pred ceEEEeccccccccccchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCCchh
Confidence 68999999999 89999999999999999999999999999999999999999999 699999999997 499999
Q ss_pred ccchHhhhccCcCCCC
Q psy724 76 CVLDDQAKLLMAYETL 91 (92)
Q Consensus 76 ~lLdee~~~p~~td~~ 91 (92)
++|||||++|++||++
T Consensus 507 ~lLdee~~~p~~tD~~ 522 (995)
T 2ycu_A 507 ALLDEECWFPKATDKS 522 (995)
T ss_dssp HHHHHSSSSTTCCHHH
T ss_pred hhhHHHhcCCCCchHH
Confidence 9999999999999975
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=7.1e-36 Score=240.23 Aligned_cols=89 Identities=44% Similarity=0.820 Sum_probs=85.8
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCccccccc-CChHHHHHHHhc-CCCcccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG-KPNGLLC 76 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~~~li~~-~p~Gll~ 76 (92)
++||||||||| .||||||||||||||||++|++++|..|+++|.+|||+|..++| .||++|+|||++ +|.|||+
T Consensus 448 ~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~ 527 (1010)
T 1g8x_A 448 YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILA 527 (1010)
T ss_dssp EEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHH
T ss_pred ceeeeccCcccccCCcCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHHHHHHhcCCCCeeeh
Confidence 68999999999 89999999999999999999999999999999999999999999 599999999997 4999999
Q ss_pred cchHhhhccCcCCCC
Q psy724 77 VLDDQAKLLMAYETL 91 (92)
Q Consensus 77 lLdee~~~p~~td~~ 91 (92)
+|||||++|++||++
T Consensus 528 lLdee~~~p~~td~~ 542 (1010)
T 1g8x_A 528 LLDEQSVFPNATDNT 542 (1010)
T ss_dssp HHHHHTTSSSCCHHH
T ss_pred hhhHHhCCCCCChHH
Confidence 999999999999975
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=1e-35 Score=241.66 Aligned_cols=89 Identities=45% Similarity=0.817 Sum_probs=84.4
Q ss_pred CEEEEeeccCc----CccHHHHHHhhhhhhHHHHHHHhhhhhhHhhhhhcCCccccccc-CChHHHHHHHhcC--CCccc
Q psy724 3 PIIGIISLFML----ILGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK--PNGLL 75 (92)
Q Consensus 3 ~~IgILDi~GF----~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~~~li~~~--p~Gll 75 (92)
+|||||||||| .|||||||||||||+||++|++++|..++++|..|||+|..++| .||++|+|||+++ |+|||
T Consensus 458 ~~IgvLDi~GFE~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil 537 (1184)
T 1i84_S 458 SFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVL 537 (1184)
T ss_dssp EEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHH
T ss_pred ceEEEeecCCcCCCCcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCch
Confidence 68999999999 89999999999999999999999999999999999999999999 5999999999962 34999
Q ss_pred ccchHhhhccCcCCCC
Q psy724 76 CVLDDQAKLLMAYETL 91 (92)
Q Consensus 76 ~lLdee~~~p~~td~~ 91 (92)
++|||||++|++||.+
T Consensus 538 ~lLdee~~~p~~td~~ 553 (1184)
T 1i84_S 538 ALLDEECWFPKATDTS 553 (1184)
T ss_dssp HHHHHTTSCTTCCHHH
T ss_pred hhhhhhhCCCCCChHH
Confidence 9999999999999975
No 12
>1y4m_A HERV-FRD_6P24.1 provirus ancestral ENV polyprotei; coat protein, membrane fusion, endogenous retrovirus, membra protein; 1.60A {Homo sapiens} SCOP: h.3.2.1
Probab=44.06 E-value=5.6 Score=21.22 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=22.5
Q ss_pred ChHHHHHHHhcCCCcccccchHhhhc
Q psy724 59 DNTLCLQLVEGKPNGLLCVLDDQAKL 84 (92)
Q Consensus 59 dn~~~~~li~~~p~Gll~lLdee~~~ 84 (92)
.|+..+|++.-+..|+=..|.|+|-+
T Consensus 25 QNRraLDlL~a~~GG~C~~l~e~CC~ 50 (53)
T 1y4m_A 25 QNRRGLDMLTAAQGGICLALDEKCCF 50 (53)
T ss_dssp HHHHHHHHHTGGGTSHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHhCCccHHhcCchhc
Confidence 57889999988888999999999876
No 13
>1mof_A Moloney murine leukemia virus P15; glycoprotein, coat protein, polyprotein, transmembrane, SIGN protein; 1.70A {Moloney murine leukemia virus} SCOP: h.3.2.1
Probab=39.70 E-value=6.8 Score=21.05 Aligned_cols=26 Identities=27% Similarity=0.341 Sum_probs=22.4
Q ss_pred ChHHHHHHHhcCCCcccccchHhhhc
Q psy724 59 DNTLCLQLVEGKPNGLLCVLDDQAKL 84 (92)
Q Consensus 59 dn~~~~~li~~~p~Gll~lLdee~~~ 84 (92)
.|+..+|++.-+..|+=..|.|+|-+
T Consensus 27 QNRraLD~L~a~~GG~C~~l~e~CCf 52 (55)
T 1mof_A 27 QNRRGLDLLFLKEGGLCAALKEECAF 52 (55)
T ss_dssp HHHHHHHHHTGGGTCHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHhCCccHHHcCchhc
Confidence 57889999988888999999999876
No 14
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=23.15 E-value=91 Score=20.60 Aligned_cols=30 Identities=17% Similarity=0.385 Sum_probs=17.8
Q ss_pred EEEEeeccCc------CccHHHHHHhhhhhhHHHHHH
Q psy724 4 IIGIISLFML------ILGFEQLCINYANEHLQYYFN 34 (92)
Q Consensus 4 ~IgILDi~GF------~n~~eql~iN~~nE~l~~~~~ 34 (92)
.+-|+|+||| ...+.. ...|..++...++.
T Consensus 66 ~l~liDTpG~~d~~~~~~~~~~-i~~~i~~~~~~~l~ 101 (274)
T 3t5d_A 66 LLTIVDTPGFGDAVDNSNCWQP-VIDYIDSKFEDYLN 101 (274)
T ss_dssp EEEEEECCCCSCCSCCTTTTHH-HHHHHHHHHHHHHH
T ss_pred EEEEEECCCccccccchhhHHH-HHHHHHHHHHHHHH
Confidence 4789999999 223433 34555555555543
Done!