BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7247
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R491|EHD3_RAT EH domain-containing protein 3 OS=Rattus norvegicus GN=Ehd3 PE=1
SV=2
Length = 535
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLFKD+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLEL-QLELENNRVE-NNRVEKSHS-SP-----ITRMQ 104
MPS F + + EL NN E R+E+ H SP + RMQ
Sbjct: 318 MPSVFGKDTKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQ 360
>sp|Q9QXY6|EHD3_MOUSE EH domain-containing protein 3 OS=Mus musculus GN=Ehd3 PE=1 SV=2
Length = 535
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLF+D+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLEL-QLELENNRVE-NNRVEKSHS-SP-----ITRMQ 104
MPS F + + EL NN E R+E+ H SP + RMQ
Sbjct: 318 MPSVFGKDTKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQ 360
>sp|Q9NZN3|EHD3_HUMAN EH domain-containing protein 3 OS=Homo sapiens GN=EHD3 PE=1 SV=2
Length = 535
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLF+D+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLE-LQLELENNRVE-NNRVEKSHS-SP-----ITRMQ 104
MPS F + + EL NN E R+E+ H SP + RMQ
Sbjct: 318 MPSVFGKDNKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQ 360
>sp|Q641Z6|EHD1_RAT EH domain-containing protein 1 OS=Rattus norvegicus GN=Ehd1 PE=1
SV=1
Length = 534
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLFKD+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLEL-QLELENNRVE-NNRVEKSH 96
MP+ F E + EL NN E ++E+ H
Sbjct: 318 MPNVFGKESKKKELVNNLGEIYQKIEREH 346
>sp|Q9WVK4|EHD1_MOUSE EH domain-containing protein 1 OS=Mus musculus GN=Ehd1 PE=1 SV=1
Length = 534
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLFKD+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLEL-QLELENNRVE-NNRVEKSH 96
MP+ F E + EL NN E ++E+ H
Sbjct: 318 MPNVFGKESKKKELVNNLGEIYQKIEREH 346
>sp|Q5RBP4|EHD1_PONAB EH domain-containing protein 1 OS=Pongo abelii GN=EHD1 PE=2 SV=1
Length = 534
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLFKD+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLEL-QLELENNRVE-NNRVEKSH 96
MP+ F E + EL NN E ++E+ H
Sbjct: 318 MPNVFGKESKKKELVNNLGEIYQKIEREH 346
>sp|Q9H4M9|EHD1_HUMAN EH domain-containing protein 1 OS=Homo sapiens GN=EHD1 PE=1 SV=2
Length = 534
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLFKD+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLEL-QLELENNRVE-NNRVEKSH 96
MP+ F E + EL NN E ++E+ H
Sbjct: 318 MPNVFGKESKKKELVNNLGEIYQKIEREH 346
>sp|Q5E9R3|EHD1_BOVIN EH domain-containing protein 1 OS=Bos taurus GN=EHD1 PE=2 SV=1
Length = 534
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W P NRKLFE EEQDLFKD+Q+LP+NA +RKLND+IKRARLAKVHA+II +L+ E
Sbjct: 258 WSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKE 317
Query: 70 MPSTFPLEL-QLELENNRVE-NNRVEKSH 96
MP+ F E + EL NN E ++E+ H
Sbjct: 318 MPNVFGKESKKKELVNNLGEIYQKIEREH 346
>sp|Q9H223|EHD4_HUMAN EH domain-containing protein 4 OS=Homo sapiens GN=EHD4 PE=1 SV=1
Length = 541
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 53/68 (77%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W QP + NR+LFE E QDLF+D+Q+LP+ A +RKLND+IKRARLAKVHA+II L+ E
Sbjct: 261 WAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKE 320
Query: 70 MPSTFPLE 77
MPS F E
Sbjct: 321 MPSVFGKE 328
>sp|Q9EQP2|EHD4_MOUSE EH domain-containing protein 4 OS=Mus musculus GN=Ehd4 PE=1 SV=1
Length = 541
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%)
Query: 9 IWDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRA 68
W QP + NR+LFE E QDLF+D+Q+LP+ A +RKLND+IKRARLAKVHA+II L+
Sbjct: 260 FWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKK 319
Query: 69 EMPSTFPLE 77
EMP+ F E
Sbjct: 320 EMPNMFGKE 328
>sp|Q4V8H8|EHD2_RAT EH domain-containing protein 2 OS=Rattus norvegicus GN=Ehd2 PE=1
SV=1
Length = 543
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W QP NR+LFE EEQDLF+D+Q LP++A +RKLND++KRARL +VHA+II L+ E
Sbjct: 258 WSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKE 317
Query: 70 MPSTFPLE 77
MPS F E
Sbjct: 318 MPSVFGKE 325
>sp|Q9NZN4|EHD2_HUMAN EH domain-containing protein 2 OS=Homo sapiens GN=EHD2 PE=1 SV=2
Length = 543
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W QP NR+LFE EEQDLF+D+Q LP++A +RKLND++KRARL +VHA+II L+ E
Sbjct: 258 WSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKE 317
Query: 70 MPSTFPLE 77
MPS F E
Sbjct: 318 MPSVFGKE 325
>sp|Q8BH64|EHD2_MOUSE EH domain-containing protein 2 OS=Mus musculus GN=Ehd2 PE=1 SV=1
Length = 543
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFIIGALRAE 69
W QP NR+LFE EEQDLF+D+Q LP++A +RKLND++KRARL +VHA+II L+ E
Sbjct: 258 WSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKE 317
Query: 70 MPSTFPLE 77
MP+ F E
Sbjct: 318 MPTVFGKE 325
>sp|Q7TQ48|SRCA_MOUSE Sarcalumenin OS=Mus musculus GN=Srl PE=1 SV=1
Length = 910
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFII 63
W Q ++ D +R+LF EE L +DL + +N + K+ + + A ++HA ++
Sbjct: 731 WPQDYKPDTHRELFLKEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLV 784
>sp|P13666|SRCA_RABIT Sarcalumenin OS=Oryctolagus cuniculus GN=SRL PE=2 SV=1
Length = 908
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFII 63
W Q ++ D +R+LF EE L +DL + +N + K+ + + A ++HA ++
Sbjct: 729 WPQEYKPDTHRELFLREEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLV 782
>sp|Q86TD4|SRCA_HUMAN Sarcalumenin OS=Homo sapiens GN=SRL PE=2 SV=2
Length = 932
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 10 WDQPFRYDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFII 63
W Q ++ D +++LF EE L +DL + +N + K+ + + A ++HA ++
Sbjct: 753 WPQEYKPDTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLV 806
>sp|Q96JM4|LRIQ1_HUMAN Leucine-rich repeat and IQ domain-containing protein 1 OS=Homo
sapiens GN=LRRIQ1 PE=2 SV=3
Length = 1722
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 9 IWDQPFR----YDLNRKLFEDEEQDLFKDLQTLPKNAIIRKLNDVIKRARLAKVHAFI 62
IW + F+ Y N L +EE+ FKD Q KN+++++ N+ + + AK AF+
Sbjct: 242 IWKEKFKQHEEYIRNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQ-AKYKAFV 298
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,808,855
Number of Sequences: 539616
Number of extensions: 1352574
Number of successful extensions: 3742
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3720
Number of HSP's gapped (non-prelim): 25
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)