Your job contains 1 sequence.
>psy7249
EAKSKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHR
PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD
VKEHRPRTSSVSSTGTSPCSSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSR
LGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLE
KKFRPELYEDFQIETIHDYEN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7249
(261 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261618 - symbol:larp "La related protein" species... 601 3.4e-58 2
UNIPROTKB|F1P339 - symbol:LARP1 "Uncharacterized protein"... 584 5.4e-58 2
MGI|MGI:1890165 - symbol:Larp1 "La ribonucleoprotein doma... 582 5.4e-58 2
RGD|1306683 - symbol:Larp1 "La ribonucleoprotein domain f... 574 2.8e-57 2
UNIPROTKB|Q6PKG0 - symbol:LARP1 "La-related protein 1" sp... 574 2.6e-56 2
UNIPROTKB|F1MZU1 - symbol:LARP1 "Uncharacterized protein"... 574 5.7e-55 1
UNIPROTKB|Q659C4 - symbol:LARP1B "La-related protein 1B" ... 565 4.4e-54 1
WB|WBGene00020097 - symbol:larp-1 species:6239 "Caenorhab... 435 9.9e-40 1
>FB|FBgn0261618 [details] [associations]
symbol:larp "La related protein" species:7227 "Drosophila
melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0035071
"salivary gland cell autophagic cell death" evidence=IEP]
[GO:0048102 "autophagic cell death" evidence=IEP] [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0051299 "centrosome separation" evidence=IMP] [GO:0007053
"spindle assembly involved in male meiosis" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0000001 "mitochondrion inheritance"
evidence=IMP] [GO:0035186 "syncytial blastoderm mitotic cell cycle"
evidence=IMP] EMBL:AE014297 GO:GO:0005829 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0000001 GO:GO:0035071
GO:GO:0035186 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 InterPro:IPR006607 SMART:SM00684
ChiTaRS:LARP1 GeneTree:ENSGT00390000000523 EMBL:AF221108
EMBL:AY113653 EMBL:AY118468 EMBL:BT100187 RefSeq:NP_001163757.1
RefSeq:NP_001247347.1 RefSeq:NP_001247348.1 RefSeq:NP_524998.1
RefSeq:NP_733244.5 RefSeq:NP_733245.1 IntAct:Q9VAW5 STRING:Q9VAW5
PaxDb:Q9VAW5 PRIDE:Q9VAW5 EnsemblMetazoa:FBtr0301180
EnsemblMetazoa:FBtr0306389 EnsemblMetazoa:FBtr0306390 GeneID:53567
KEGG:dme:Dmel_CG42551 CTD:53567 FlyBase:FBgn0261618
InParanoid:Q9VAW5 OMA:EPEINEM PhylomeDB:Q9VAW5 GenomeRNAi:53567
NextBio:841422 Bgee:Q9VAW5 GermOnline:CG14066 GO:GO:0007053
Uniprot:Q9VAW5
Length = 1673
Score = 601 (216.6 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 117/193 (60%), Positives = 132/193 (68%)
Query: 77 RRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHXXXXXXXXXXXX 136
+ + RFYA RT KRK RH+ +PPVE HVGW+LD EH
Sbjct: 1249 KSRRARFYAAPNSHSIDPRTPR-KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAG 1307
Query: 137 XXXXXXX---------NSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQ 187
SLP FQHPSHALLKE +FTQ+AYHKYHSRCL+ER RLG G+SQ
Sbjct: 1308 TSPTASSYGSFGSSVPQSLPVFQHPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQ 1367
Query: 188 EMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPEL 247
EMNTLYRFWSFFLR+NFN++MY EFRSLA EDA GFRYG ECLFR+FSYGLEKKFRP +
Sbjct: 1368 EMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLEKKFRPNI 1427
Query: 248 YEDFQIETIHDYE 260
Y+DFQ ETI DYE
Sbjct: 1428 YQDFQDETIADYE 1440
Score = 142 (55.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 28/54 (51%), Positives = 34/54 (62%)
Query: 12 RRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSS 65
+ + RFYA RT KRK RH+ +PPVE HVGW+LD EHRPRT+S
Sbjct: 1249 KSRRARFYAAPNSHSIDPRTPR-KRKLRHTANPPVEAHVGWLLDTVEHRPRTTS 1301
Score = 105 (42.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 157 LKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLA 216
L+E +F + Y+++ S L + G G + L+RF+S+ L F N+Y++F+
Sbjct: 1380 LRE-NFNKSMYNEFRSLALEDA---GNGFRYGLECLFRFFSYGLEKKFRPNIYQDFQDET 1435
Query: 217 REDASLGFRYGYE---CLFRYFSYGLEKKFRPELYEDFQ-IETIHDY 259
D G YG E +Y+ G + + +P+L E + + I D+
Sbjct: 1436 IADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDF 1482
Score = 74 (31.1 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 202 DNFNRNMYKEFRSLA-REDASLGFRYGYEC--LFRYFSYGLEKKFRPELYEDFQIETIHD 258
+NF + Y ++ S +E LG+ E L+R++S+ L + F +Y +F+ + D
Sbjct: 1340 NNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALED 1399
Query: 259 YEN 261
N
Sbjct: 1400 AGN 1402
Score = 41 (19.5 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 4 SKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDP--PVEHHVGWILDVKEHRP 61
S + R+S R + PR + K ++ G S P P H D K+ P
Sbjct: 166 SDTERKSVRPRAPRGGSPRKSAAGAAGAAGSNAGAVSSAVPGGPKVHK-----DRKDTSP 220
Query: 62 RTSSEAKAKSGRESQ 76
S E SG E++
Sbjct: 221 SASIEGAGSSGNEAK 235
Score = 37 (18.1 bits), Expect = 9.0e-58, Sum P(2) = 9.0e-58
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 10 SQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKA 69
+ +R+ PR Y D + + GV+ + H+ H G RP T++ +
Sbjct: 566 ADQRRPPRVY---HDRQPGAGGAGVESRHPHAG----RHPYG-------SRPATATSERV 611
Query: 70 KSGRESQRRKTPRF 83
S R S T F
Sbjct: 612 DSWRSSSSTTTAAF 625
>UNIPROTKB|F1P339 [details] [associations]
symbol:LARP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 OMA:GSEPATY
GeneTree:ENSGT00390000000523 EMBL:AADN02028672 IPI:IPI00590067
Ensembl:ENSGALT00000006374 Uniprot:F1P339
Length = 927
Score = 584 (210.6 bits), Expect = 5.4e-58, Sum P(2) = 5.4e-58
Identities = 109/188 (57%), Positives = 130/188 (69%)
Query: 79 KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHXXXXXXXXXXXXXX 138
+TPRFY VVK+ + KRKTRHS +PP+E HVGW++D +EH
Sbjct: 626 QTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPSEG 685
Query: 139 XXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTL 192
+ SLP FQHPSH LLKE FTQ YHKY RCL ER RLG G+SQEMNTL
Sbjct: 686 TPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTL 745
Query: 193 YRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQ 252
+RFWSFFLRD+FN+ MY+EF+ LA ED G+RYG ECLFRY+SYGLEKKFRP++++DFQ
Sbjct: 746 FRFWSFFLRDHFNKKMYEEFKQLAVEDGKEGYRYGLECLFRYYSYGLEKKFRPDIFKDFQ 805
Query: 253 IETIHDYE 260
ETI DYE
Sbjct: 806 EETIKDYE 813
Score = 171 (65.3 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 14 KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKS 71
+TPRFY VVK+ + KRKTRHS +PP+E HVGW++D +EHRPRT+S + + S
Sbjct: 626 QTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPS 683
Score = 84 (34.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDA 220
HF ++ Y ++ + + G + L+R++S+ L F +++K+F+ +D
Sbjct: 756 HFNKKMYEEFKQLAVEDGKE---GYRYGLECLFRYYSYGLEKKFRPDIFKDFQEETIKDY 812
Query: 221 SLGFRYGYECLFRYFSYGLEK 241
G YG E + + Y K
Sbjct: 813 EAGQLYGLEKFWAFLKYSKAK 833
Score = 41 (19.5 bits), Expect = 5.4e-58, Sum P(2) = 5.4e-58
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 52 WILDVKEHRPRTSSEAKAKSGRESQRRKTPR 82
WI +VK+ RPR S A+ K ES KTP+
Sbjct: 398 WI-EVKK-RPRPSP-ARPKKPEES---KTPQ 422
>MGI|MGI:1890165 [details] [associations]
symbol:Larp1 "La ribonucleoprotein domain family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0016239 "positive regulation of
macroautophagy" evidence=ISO] MGI:MGI:1890165 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0016239
EMBL:AL672182 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 OrthoDB:EOG4PZJ64 InterPro:IPR006607
SMART:SM00684 HOGENOM:HOG000113283 HOVERGEN:HBG054322 OMA:GSEPATY
EMBL:BC053449 EMBL:AK129202 IPI:IPI00929761 IPI:IPI00929786
UniGene:Mm.248843 ProteinModelPortal:Q6ZQ58 SMR:Q6ZQ58
STRING:Q6ZQ58 PhosphoSite:Q6ZQ58 PaxDb:Q6ZQ58 PRIDE:Q6ZQ58
Ensembl:ENSMUST00000071487 UCSC:uc007jah.2
GeneTree:ENSGT00390000000523 InParanoid:Q6ZQ58 Bgee:Q6ZQ58
CleanEx:MM_LARP1 Genevestigator:Q6ZQ58
GermOnline:ENSMUSG00000037331 Uniprot:Q6ZQ58
Length = 1072
Score = 582 (209.9 bits), Expect = 5.4e-58, Sum P(2) = 5.4e-58
Identities = 114/206 (55%), Positives = 136/206 (66%)
Query: 61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
PRT + K SQ TPRFY VVK+ + KRKTRHS +PP+E HVGW++D
Sbjct: 760 PRTPRTPQLKDS--SQ---TPRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMD 814
Query: 121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
+EH + SLP FQHPSH LLKE FTQ YHKY RC
Sbjct: 815 SREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 874
Query: 175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA G+RYG ECLFRY
Sbjct: 875 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 934
Query: 235 FSYGLEKKFRPELYEDFQIETIHDYE 260
+SYGLEKKFR ++++DFQ ET+ DYE
Sbjct: 935 YSYGLEKKFRLDIFKDFQEETVKDYE 960
Score = 173 (66.0 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 14 KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKS 71
+TPRFY VVK+ + KRKTRHS +PP+E HVGW++D +EHRPRT+S + + S
Sbjct: 773 QTPRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPS 830
Score = 91 (37.1 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDA 220
HF ++ Y ++ L + G + L+R++S+ L F +++K+F+ +D
Sbjct: 903 HFNKKMYEEFKQLALEDAKE---GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDY 959
Query: 221 SLGFRYGYECLFRYFSYGLEKKFR--PELYE 249
G YG E + + Y K P+L E
Sbjct: 960 EAGQLYGLEKFWAFLKYSKAKNLDIDPKLQE 990
Score = 49 (22.3 bits), Expect = 5.4e-58, Sum P(2) = 5.4e-58
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 2 AKSKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPV 46
A ++ GR+ R++PR A + P S G +R + P V
Sbjct: 55 ACARPGRDGAERESPRPPAAAEAPAGSDGEDGGRRDFVEAPPPKV 99
>RGD|1306683 [details] [associations]
symbol:Larp1 "La ribonucleoprotein domain family, member 1"
species:10116 "Rattus norvegicus" [GO:0016239 "positive regulation
of macroautophagy" evidence=ISO] RGD:1306683 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 InterPro:IPR006607 SMART:SM00684
GeneTree:ENSGT00390000000523 IPI:IPI00369227 PRIDE:F1M062
Ensembl:ENSRNOT00000036959 Uniprot:F1M062
Length = 1024
Score = 574 (207.1 bits), Expect = 2.8e-57, Sum P(2) = 2.8e-57
Identities = 113/206 (54%), Positives = 135/206 (65%)
Query: 61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
PRT + K SQ T RFY VVK+ + KRKTRHS +PP+E HVGW++D
Sbjct: 712 PRTPRTPQLKDS--SQ---TSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMD 766
Query: 121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
+EH + SLP FQHPSH LLKE FTQ YHKY RC
Sbjct: 767 SREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 826
Query: 175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA G+RYG ECLFRY
Sbjct: 827 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 886
Query: 235 FSYGLEKKFRPELYEDFQIETIHDYE 260
+SYGLEKKFR ++++DFQ ET+ DYE
Sbjct: 887 YSYGLEKKFRLDIFKDFQEETVKDYE 912
Score = 165 (63.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 14 KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKS 71
+T RFY VVK+ + KRKTRHS +PP+E HVGW++D +EHRPRT+S + + S
Sbjct: 725 QTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPS 782
Score = 91 (37.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDA 220
HF ++ Y ++ L + G + L+R++S+ L F +++K+F+ +D
Sbjct: 855 HFNKKMYEEFKQLALEDAKE---GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDY 911
Query: 221 SLGFRYGYECLFRYFSYGLEKKFR--PELYE 249
G YG E + + Y K P+L E
Sbjct: 912 EAGQLYGLEKFWAFLKYSKAKNLDIDPKLQE 942
Score = 49 (22.3 bits), Expect = 2.8e-57, Sum P(2) = 2.8e-57
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 2 AKSKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPV 46
A ++ GR+ R++PR A + P S G +R + P V
Sbjct: 6 ACARPGRDGTERESPRPPAAAEAPAGSDGEDGGRRDFVEAPPPKV 50
>UNIPROTKB|Q6PKG0 [details] [associations]
symbol:LARP1 "La-related protein 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0016239
"positive regulation of macroautophagy" evidence=IMP]
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 InterPro:IPR006607 SMART:SM00684 EMBL:BC001460
EMBL:BC033856 EMBL:AK091465 EMBL:AB018274 EMBL:AL133034
IPI:IPI00185919 IPI:IPI00411690 PIR:T42646 RefSeq:NP_056130.2
UniGene:Hs.292078 ProteinModelPortal:Q6PKG0 SMR:Q6PKG0
IntAct:Q6PKG0 MINT:MINT-1631511 STRING:Q6PKG0 PhosphoSite:Q6PKG0
DMDM:73621135 PaxDb:Q6PKG0 PRIDE:Q6PKG0 DNASU:23367
Ensembl:ENST00000336314 Ensembl:ENST00000518297 GeneID:23367
KEGG:hsa:23367 UCSC:uc003lvo.3 UCSC:uc010jie.1 CTD:23367
GeneCards:GC05P154092 HGNC:HGNC:29531 HPA:CAB015222 MIM:612059
neXtProt:NX_Q6PKG0 PharmGKB:PA142671564 HOGENOM:HOG000113283
HOVERGEN:HBG054322 InParanoid:Q6PKG0 OMA:GSEPATY ChiTaRS:LARP1
GenomeRNAi:23367 NextBio:45430 PMAP-CutDB:Q6PKG0 Bgee:Q6PKG0
CleanEx:HS_LARP1 Genevestigator:Q6PKG0 GermOnline:ENSG00000155506
Uniprot:Q6PKG0
Length = 1096
Score = 574 (207.1 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
Identities = 113/206 (54%), Positives = 135/206 (65%)
Query: 61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
PRT + K SQ T RFY VVK+ + KRKTRHS +PP+E HVGW++D
Sbjct: 783 PRTPRTPQLKDS--SQ---TSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMD 837
Query: 121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
+EH + SLP FQHPSH LLKE FTQ YHKY RC
Sbjct: 838 SREHRPRTASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 897
Query: 175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA G+RYG ECLFRY
Sbjct: 898 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 957
Query: 235 FSYGLEKKFRPELYEDFQIETIHDYE 260
+SYGLEKKFR ++++DFQ ET+ DYE
Sbjct: 958 YSYGLEKKFRLDIFKDFQEETVKDYE 983
Score = 165 (63.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 14 KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKS 71
+T RFY VVK+ + KRKTRHS +PP+E HVGW++D +EHRPRT+S + + S
Sbjct: 796 QTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPS 853
Score = 91 (37.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDA 220
HF ++ Y ++ L + G + L+R++S+ L F +++K+F+ +D
Sbjct: 926 HFNKKMYEEFKQLALEDAKE---GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDY 982
Query: 221 SLGFRYGYECLFRYFSYGLEKKFR--PELYE 249
G YG E + + Y K P+L E
Sbjct: 983 EAGQLYGLEKFWAFLKYSKAKNLDIDPKLQE 1013
Score = 42 (19.8 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 15 TPRFYAVVKDPESSSRTKGVKRKTRH-SQDPPVEHHVGWILDVKEHRPRTSSEAKAKSGR 73
+PR AV P + +K + S P WI +VK+ RPR S A+ K
Sbjct: 521 SPR--AVTPVPTKTEEVSNLKTLPKGLSASLPDLDSENWI-EVKK-RPRPSP-ARPKKSE 575
Query: 74 ESQ 76
ES+
Sbjct: 576 ESR 578
>UNIPROTKB|F1MZU1 [details] [associations]
symbol:LARP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 OMA:GSEPATY
GeneTree:ENSGT00390000000523 EMBL:DAAA02020719 IPI:IPI00714415
PRIDE:F1MZU1 Ensembl:ENSBTAT00000011109 Uniprot:F1MZU1
Length = 951
Score = 574 (207.1 bits), Expect = 5.7e-55, P = 5.7e-55
Identities = 113/206 (54%), Positives = 135/206 (65%)
Query: 61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
PRT + K SQ T RFY VVK+ + KRKTRHS +PP+E HVGW++D
Sbjct: 640 PRTPRTPQLKDS--SQ---TSRFYPVVKEGRTLDAKTPRKRKTRHSSNPPLESHVGWVMD 694
Query: 121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
+EH + SLP FQHPSH LLKE FTQ YHKY RC
Sbjct: 695 SREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 754
Query: 175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA G+RYG ECLFRY
Sbjct: 755 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 814
Query: 235 FSYGLEKKFRPELYEDFQIETIHDYE 260
+SYGLEKKFR ++++DFQ ET+ DYE
Sbjct: 815 YSYGLEKKFRLDIFKDFQEETVKDYE 840
Score = 165 (63.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 14 KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKS 71
+T RFY VVK+ + KRKTRHS +PP+E HVGW++D +EHRPRT+S + + S
Sbjct: 653 QTSRFYPVVKEGRTLDAKTPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPS 710
Score = 91 (37.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDA 220
HF ++ Y ++ L + G + L+R++S+ L F +++K+F+ +D
Sbjct: 783 HFNKKMYEEFKQLALEDAKE---GYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDY 839
Query: 221 SLGFRYGYECLFRYFSYGLEKKFR--PELYE 249
G YG E + + Y K P+L E
Sbjct: 840 EAGQLYGLEKFWAFLKYSKAKNLDIDPKLQE 870
>UNIPROTKB|Q659C4 [details] [associations]
symbol:LARP1B "La-related protein 1B" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 EMBL:AK001240
EMBL:AK027164 EMBL:AK092764 EMBL:AK098437 EMBL:AL137759
EMBL:AL832170 EMBL:BX537937 EMBL:AC096898 EMBL:AC099340
EMBL:AC108045 EMBL:AC114735 EMBL:AC124030 EMBL:BC030516
EMBL:BC050654 EMBL:BC062606 EMBL:BC110300 IPI:IPI00383949
IPI:IPI00855721 IPI:IPI00855786 IPI:IPI00855812 IPI:IPI00855930
IPI:IPI00855953 IPI:IPI00856120 IPI:IPI00940348 IPI:IPI00943149
RefSeq:NP_060548.2 RefSeq:NP_115615.2 RefSeq:NP_835144.1
UniGene:Hs.657067 HSSP:Q71RC2 ProteinModelPortal:Q659C4 SMR:Q659C4
DIP:DIP-47319N IntAct:Q659C4 PhosphoSite:Q659C4 DMDM:158564329
PaxDb:Q659C4 PRIDE:Q659C4 DNASU:55132 Ensembl:ENST00000264584
Ensembl:ENST00000326639 Ensembl:ENST00000354456
Ensembl:ENST00000394288 Ensembl:ENST00000441387 GeneID:55132
KEGG:hsa:55132 UCSC:uc003ifw.1 UCSC:uc003iga.3 UCSC:uc003igc.3
UCSC:uc003igf.3 CTD:55132 GeneCards:GC04P128983 HGNC:HGNC:24704
HPA:HPA036280 neXtProt:NX_Q659C4 PharmGKB:PA165664174
InParanoid:Q659C4 OMA:PPYVKKH OrthoDB:EOG4PZJ64 PhylomeDB:Q659C4
ChiTaRS:LARP1B GenomeRNAi:55132 NextBio:58806 ArrayExpress:Q659C4
Bgee:Q659C4 CleanEx:HS_LARP2 Genevestigator:Q659C4
InterPro:IPR006607 SMART:SM00684 Uniprot:Q659C4
Length = 914
Score = 565 (203.9 bits), Expect = 4.4e-54, P = 4.4e-54
Identities = 109/208 (52%), Positives = 135/208 (64%)
Query: 63 TSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVK 122
T + ++ R KTPRFY VVK+P++ KRKTRHS +PP+E HVGW++D +
Sbjct: 599 TRTPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSR 658
Query: 123 EHXXXXXXXXXXXXXXXXXXX---------NSLPSFQHPSHALLKERHFTQEAYHKYHSR 173
+ +S P FQHPSH LLKE FTQ+ YHKY R
Sbjct: 659 DRGPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRR 718
Query: 174 CLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFR 233
CL ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EFR LA EDA +RYG ECLFR
Sbjct: 719 CLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFR 778
Query: 234 YFSYGLEKKFRPELYEDFQIETIHDYEN 261
++SYGLEKKFR E+++DFQ ET DYE+
Sbjct: 779 FYSYGLEKKFRREIFQDFQEETKKDYES 806
Score = 160 (61.4 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 5 KSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTS 64
++ R KTPRFY VVK+P++ KRKTRHS +PP+E HVGW++D ++ P TS
Sbjct: 606 RTPRLQDPNKTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDRGPGTS 665
Query: 65 S 65
S
Sbjct: 666 S 666
Score = 96 (38.9 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 161 HFTQEAYHKYHSRC---LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAR 217
HF ++ Y ++ +E R G + L+RF+S+ L F R ++++F+ +
Sbjct: 748 HFNKKMYEEFRQLAWEDAKENYRYG------LECLFRFYSYGLEKKFRREIFQDFQEETK 801
Query: 218 EDASLGFRYGYECLFRYFSYGLEK--KFRPELYE 249
+D G YG E + Y Y K P+L E
Sbjct: 802 KDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQE 835
>WB|WBGene00020097 [details] [associations]
symbol:larp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0034046 "poly(G) RNA binding" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0008266
GO:GO:0002119 GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040035 GO:GO:0000932 GO:GO:0034046
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 GeneTree:ENSGT00390000000523
EMBL:FO080694 ProteinModelPortal:D5MCN2 SMR:D5MCN2 PRIDE:D5MCN2
EnsemblMetazoa:R144.7b KEGG:cel:CELE_R144.7 CTD:175680
WormBase:R144.7b OMA:CAEMNTL ArrayExpress:D5MCN2 Uniprot:D5MCN2
Length = 1150
Score = 435 (158.2 bits), Expect = 9.9e-40, P = 9.9e-40
Identities = 92/210 (43%), Positives = 121/210 (57%)
Query: 52 WILDVKEHRPRTSSEAKAK-SGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPP 110
W KE + + K+ RES+ +K RFY + K K+KTRHS+ PP
Sbjct: 899 WTKKAKERAAASVTVPKSPMQRRESEEQKMNRFYPISKPTAPLDAKSPRKKKTRHSEKPP 958
Query: 111 VEHHVGWILDVKEHXXXXXXXXXXXXXXXXXXXNSLPSFQHPSHALLKERHFTQEAYHKY 170
VE V W+L ++ + +P+ HPS +LL+E F Q Y +
Sbjct: 959 VEMPVAWVLGRED-------ALPAAPIGIAASSSQVPA-NHPSISLLQEDRFVQNVYSTW 1010
Query: 171 HSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYEC 230
CL++R LG + EMNTLYRFWSFFLRDNFNRNMY+EFR LA EDA +G RYG E
Sbjct: 1011 RQACLKQRKSLGYDCA-EMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEA 1069
Query: 231 LFRYFSYGLEKKFRPELYEDFQIETIHDYE 260
LFR++SYGLEKKFRPE+Y++F + D +
Sbjct: 1070 LFRFYSYGLEKKFRPEIYKNFMKDVTTDVQ 1099
Score = 108 (43.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 8 RESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEA 67
RES+ +K RFY + K K+KTRHS+ PPVE V W+L ++ P
Sbjct: 921 RESEEQKMNRFYPISKPTAPLDAKSPRKKKTRHSEKPPVEMPVAWVLGREDALPAAPIGI 980
Query: 68 KAKSGR 73
A S +
Sbjct: 981 AASSSQ 986
Score = 88 (36.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/102 (25%), Positives = 45/102 (44%)
Query: 161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDA 220
+F + Y ++ L E + +G E L+RF+S+ L F +YK F D
Sbjct: 1042 NFNRNMYEEFRKLAL-EDAEIGSRYGIE--ALFRFYSYGLEKKFRPEIYKNFMKDVTTDV 1098
Query: 221 SLGFRYGYECLFRYFSYGLEKKFRPELY-EDFQIETIHDYEN 261
G YG E LF + K +L +D+ + ++ Y++
Sbjct: 1099 QKGELYGLEKLFAFLQ---RSKIAKQLVVDDYLTKELNKYKS 1137
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 261 242 0.00096 113 3 11 22 0.44 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 595 (63 KB)
Total size of DFA: 194 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.67u 0.10s 22.77t Elapsed: 00:00:17
Total cpu time: 22.68u 0.10s 22.78t Elapsed: 00:00:17
Start: Thu Aug 15 11:54:43 2013 End: Thu Aug 15 11:55:00 2013