Your job contains 1 sequence.
>psy7251
MDPEGFLPVTLITSFSHYMPFEYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSL
TTDINRVLLAIQKSDKLELVDNFKVNQIIVIADTNGKQRSDYLPNNNHLHSNNNKRLTSL
RSRLTLLSPNGQRMMISLLLLALTTQTIGNR
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7251
(151 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261618 - symbol:larp "La related protein" species... 220 1.5e-16 1
UNIPROTKB|F1P339 - symbol:LARP1 "Uncharacterized protein"... 202 7.3e-16 2
UNIPROTKB|Q6PKG0 - symbol:LARP1 "La-related protein 1" sp... 202 7.1e-15 1
RGD|1306683 - symbol:Larp1 "La ribonucleoprotein domain f... 198 1.7e-14 1
MGI|MGI:1890165 - symbol:Larp1 "La ribonucleoprotein doma... 198 1.9e-14 1
UNIPROTKB|G3V0E9 - symbol:LARP1B "La-related protein 1B" ... 189 2.1e-14 1
UNIPROTKB|F1MZU1 - symbol:LARP1 "Uncharacterized protein"... 196 2.6e-14 1
UNIPROTKB|G3XAJ5 - symbol:LARP1B "La-related protein 1B" ... 189 5.5e-14 1
UNIPROTKB|Q659C4 - symbol:LARP1B "La-related protein 1B" ... 189 1.4e-13 1
WB|WBGene00020097 - symbol:larp-1 species:6239 "Caenorhab... 183 8.1e-13 1
POMBASE|SPAC1527.03 - symbol:SPAC1527.03 "RNA-binding pro... 161 4.9e-11 1
TAIR|locus:2156912 - symbol:LARP1b "AT5G66100" species:37... 147 1.5e-09 1
TAIR|locus:2125334 - symbol:LARP1c "La related protein 1c... 142 6.5e-09 1
ASPGD|ASPL0000062948 - symbol:AN1288 species:162425 "Emer... 134 7.7e-08 1
UNIPROTKB|E7ERC4 - symbol:SSB "Lupus La protein" species:... 122 8.7e-08 1
UNIPROTKB|E9PFL9 - symbol:SSB "Lupus La protein" species:... 122 8.7e-08 1
UNIPROTKB|F1S1V1 - symbol:SSB "Uncharacterized protein" s... 123 4.8e-07 1
UNIPROTKB|E9PFH8 - symbol:SSB "Lupus La protein" species:... 122 5.1e-07 1
UNIPROTKB|P10881 - symbol:SSB "Lupus La protein homolog" ... 122 6.2e-07 1
UNIPROTKB|E2RH09 - symbol:SSB "Uncharacterized protein" s... 122 6.3e-07 1
UNIPROTKB|P05455 - symbol:SSB "Lupus La protein" species:... 122 6.3e-07 1
FB|FBgn0011638 - symbol:La "La autoantigen-like" species:... 121 7.5e-07 1
DICTYBASE|DDB_G0281763 - symbol:DDB_G0281763 "Lupus La pr... 120 8.1e-07 1
FB|FBgn0035424 - symbol:CG11505 species:7227 "Drosophila ... 128 8.2e-07 1
DICTYBASE|DDB_G0289333 - symbol:DDB_G0289333 species:4468... 122 1.2e-06 1
UNIPROTKB|F1NWE6 - symbol:LARP6 "Uncharacterized protein"... 120 1.2e-06 1
MGI|MGI:98423 - symbol:Ssb "Sjogren syndrome antigen B" s... 116 2.9e-06 1
UNIPROTKB|F1MAB1 - symbol:Ssb "Lupus La protein homolog" ... 115 3.2e-06 1
UNIPROTKB|E1BVY8 - symbol:LOC420093 "Uncharacterized prot... 107 3.4e-06 1
RGD|620804 - symbol:Ssb "Sjogren syndrome antigen B" spec... 115 3.7e-06 1
UNIPROTKB|Q66HM7 - symbol:Ssb "Sjogren syndrome antigen B... 115 3.7e-06 1
FB|FBgn0260771 - symbol:Larp7 "La related protein 7" spec... 115 6.3e-06 1
SGD|S000000542 - symbol:SRO9 "Cytoplasmic RNA-binding pro... 113 6.6e-06 1
FB|FBgn0033936 - symbol:CG17386 species:7227 "Drosophila ... 116 8.0e-06 1
ZFIN|ZDB-GENE-030131-223 - symbol:ssb "Sjogren syndrome a... 97 9.0e-06 2
TAIR|locus:2170478 - symbol:LARP6a "La related protein 6a... 110 1.3e-05 1
WB|WBGene00016653 - symbol:C44E4.4 species:6239 "Caenorha... 108 2.0e-05 1
UNIPROTKB|Q96J85 - symbol:LARP4 "La-related protein 4" sp... 107 2.3e-05 1
UNIPROTKB|H9KZD5 - symbol:LARP4 "Uncharacterized protein"... 110 2.9e-05 1
UNIPROTKB|E9PDG5 - symbol:LARP4 "La-related protein 4" sp... 107 3.0e-05 1
ZFIN|ZDB-GENE-030131-6403 - symbol:larp6 "La ribonucleopr... 107 3.4e-05 1
UNIPROTKB|Q5ZKS1 - symbol:SSB "Uncharacterized protein" s... 97 3.9e-05 1
UNIPROTKB|D6RAF3 - symbol:LARP7 "La-related protein 7" sp... 97 3.9e-05 1
UNIPROTKB|D6RF49 - symbol:LARP7 "La-related protein 7" sp... 97 3.9e-05 1
UNIPROTKB|F1M4K9 - symbol:LOC683071 "Protein LOC683071" s... 107 4.3e-05 1
UNIPROTKB|G3XAA8 - symbol:LARP4 "La-related protein 4" sp... 107 5.1e-05 1
RGD|1592944 - symbol:LOC680385 "similar to Sjogren syndro... 104 5.5e-05 1
UNIPROTKB|F1SH87 - symbol:LARP4 "Uncharacterized protein"... 107 5.6e-05 1
UNIPROTKB|E2R028 - symbol:LARP4 "Uncharacterized protein"... 107 5.8e-05 1
UNIPROTKB|F1PIU8 - symbol:LARP4 "Uncharacterized protein"... 107 5.9e-05 1
UNIPROTKB|Q71RC2 - symbol:LARP4 "La-related protein 4" sp... 107 5.9e-05 1
UNIPROTKB|F1MHD9 - symbol:LARP4 "Uncharacterized protein"... 106 6.2e-05 1
TAIR|locus:2051734 - symbol:LARP6b "AT2G43970" species:37... 105 6.6e-05 1
UNIPROTKB|F1NJ86 - symbol:LARP7 "Uncharacterized protein"... 99 7.0e-05 1
UNIPROTKB|F1P301 - symbol:SSB "Uncharacterized protein" s... 97 8.5e-05 1
UNIPROTKB|F1MBD0 - symbol:LARP6 "Uncharacterized protein"... 102 9.8e-05 1
UNIPROTKB|F1PKV9 - symbol:LARP6 "Uncharacterized protein"... 102 9.9e-05 1
TAIR|locus:2089508 - symbol:LARP6c "La related protein 6c... 102 0.00011 1
CGD|CAL0005700 - symbol:SLF1 species:5476 "Candida albica... 101 0.00011 1
UNIPROTKB|Q5ADL6 - symbol:SLF1 "Potential polysome-associ... 101 0.00011 1
UNIPROTKB|F1SIT3 - symbol:LARP6 "Uncharacterized protein"... 102 0.00012 1
MGI|MGI:1914807 - symbol:Larp6 "La ribonucleoprotein doma... 102 0.00012 1
RGD|1308414 - symbol:Larp6 "La ribonucleoprotein domain f... 102 0.00012 1
UNIPROTKB|Q9BRS8 - symbol:LARP6 "La-related protein 6" sp... 101 0.00016 1
MGI|MGI:2443114 - symbol:Larp4 "La ribonucleoprotein doma... 103 0.00016 1
UNIPROTKB|D6RFF0 - symbol:LARP7 "La-related protein 7" sp... 97 0.00019 1
SGD|S000002923 - symbol:SLF1 "RNA binding protein that as... 99 0.00022 1
MGI|MGI:107634 - symbol:Larp7 "La ribonucleoprotein domai... 99 0.00031 1
RGD|1592474 - symbol:Larp7 "La ribonucleoprotein domain f... 99 0.00031 1
UNIPROTKB|Q5XI01 - symbol:Larp7 "La-related protein 7" sp... 99 0.00031 1
UNIPROTKB|F1NYE7 - symbol:SSB "Uncharacterized protein" s... 97 0.00032 1
UNIPROTKB|E2QW27 - symbol:LARP7 "Uncharacterized protein"... 99 0.00032 1
POMBASE|SPAC57A10.10c - symbol:sla1 "La protein homolog" ... 95 0.00032 1
UNIPROTKB|E1BQG3 - symbol:LARP7 "Uncharacterized protein"... 99 0.00033 1
RGD|1310713 - symbol:Larp4b "La ribonucleoprotein domain ... 99 0.00037 1
UNIPROTKB|I3LNK9 - symbol:I3LNK9 "Uncharacterized protein... 98 0.00041 1
UNIPROTKB|F1S150 - symbol:LARP7 "Uncharacterized protein"... 98 0.00041 1
UNIPROTKB|Q92615 - symbol:LARP4B "La-related protein 4B" ... 99 0.00043 1
MGI|MGI:106330 - symbol:Larp4b "La ribonucleoprotein doma... 99 0.00043 1
UNIPROTKB|F1MR14 - symbol:F1MR14 "Uncharacterized protein... 97 0.00052 1
UNIPROTKB|Q4G0J3 - symbol:LARP7 "La-related protein 7" sp... 97 0.00052 1
UNIPROTKB|F1RX46 - symbol:LARP4B "Uncharacterized protein... 97 0.00069 1
UNIPROTKB|F1MHX7 - symbol:LARP4B "Uncharacterized protein... 97 0.00070 1
ZFIN|ZDB-GENE-061027-39 - symbol:larp4b "La ribonucleopro... 96 0.00088 1
>FB|FBgn0261618 [details] [associations]
symbol:larp "La related protein" species:7227 "Drosophila
melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0035071
"salivary gland cell autophagic cell death" evidence=IEP]
[GO:0048102 "autophagic cell death" evidence=IEP] [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0051299 "centrosome separation" evidence=IMP] [GO:0007053
"spindle assembly involved in male meiosis" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0000001 "mitochondrion inheritance"
evidence=IMP] [GO:0035186 "syncytial blastoderm mitotic cell cycle"
evidence=IMP] EMBL:AE014297 GO:GO:0005829 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0000001 GO:GO:0035071
GO:GO:0035186 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 InterPro:IPR006607 SMART:SM00684
ChiTaRS:LARP1 GeneTree:ENSGT00390000000523 EMBL:AF221108
EMBL:AY113653 EMBL:AY118468 EMBL:BT100187 RefSeq:NP_001163757.1
RefSeq:NP_001247347.1 RefSeq:NP_001247348.1 RefSeq:NP_524998.1
RefSeq:NP_733244.5 RefSeq:NP_733245.1 IntAct:Q9VAW5 STRING:Q9VAW5
PaxDb:Q9VAW5 PRIDE:Q9VAW5 EnsemblMetazoa:FBtr0301180
EnsemblMetazoa:FBtr0306389 EnsemblMetazoa:FBtr0306390 GeneID:53567
KEGG:dme:Dmel_CG42551 CTD:53567 FlyBase:FBgn0261618
InParanoid:Q9VAW5 OMA:EPEINEM PhylomeDB:Q9VAW5 GenomeRNAi:53567
NextBio:841422 Bgee:Q9VAW5 GermOnline:CG14066 GO:GO:0007053
Uniprot:Q9VAW5
Length = 1673
Score = 220 (82.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS DNL D FLR+KMDPEG++PVTLIASF RV +LTTD+ ++ AI++SDKLEL +
Sbjct: 738 EYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFE 797
Query: 82 NFKV 85
+KV
Sbjct: 798 GYKV 801
>UNIPROTKB|F1P339 [details] [associations]
symbol:LARP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 OMA:GSEPATY
GeneTree:ENSGT00390000000523 EMBL:AADN02028672 IPI:IPI00590067
Ensembl:ENSGALT00000006374 Uniprot:F1P339
Length = 927
Score = 202 (76.2 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS DNL RD FLR+KMD +GFLP+TLIASF RV++LTTDI+ ++ A++ S +E+VD
Sbjct: 251 EYYFSVDNLERDFFLRRKMDSDGFLPITLIASFHRVQALTTDISLIIKALKDSKVVEIVD 310
Score = 34 (17.0 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 80 VDNFKVNQIIVIADT 94
+D+ VN+I+++ T
Sbjct: 465 IDDRDVNKILIVTQT 479
>UNIPROTKB|Q6PKG0 [details] [associations]
symbol:LARP1 "La-related protein 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0016239
"positive regulation of macroautophagy" evidence=IMP]
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 InterPro:IPR006607 SMART:SM00684 EMBL:BC001460
EMBL:BC033856 EMBL:AK091465 EMBL:AB018274 EMBL:AL133034
IPI:IPI00185919 IPI:IPI00411690 PIR:T42646 RefSeq:NP_056130.2
UniGene:Hs.292078 ProteinModelPortal:Q6PKG0 SMR:Q6PKG0
IntAct:Q6PKG0 MINT:MINT-1631511 STRING:Q6PKG0 PhosphoSite:Q6PKG0
DMDM:73621135 PaxDb:Q6PKG0 PRIDE:Q6PKG0 DNASU:23367
Ensembl:ENST00000336314 Ensembl:ENST00000518297 GeneID:23367
KEGG:hsa:23367 UCSC:uc003lvo.3 UCSC:uc010jie.1 CTD:23367
GeneCards:GC05P154092 HGNC:HGNC:29531 HPA:CAB015222 MIM:612059
neXtProt:NX_Q6PKG0 PharmGKB:PA142671564 HOGENOM:HOG000113283
HOVERGEN:HBG054322 InParanoid:Q6PKG0 OMA:GSEPATY ChiTaRS:LARP1
GenomeRNAi:23367 NextBio:45430 PMAP-CutDB:Q6PKG0 Bgee:Q6PKG0
CleanEx:HS_LARP1 Genevestigator:Q6PKG0 GermOnline:ENSG00000155506
Uniprot:Q6PKG0
Length = 1096
Score = 202 (76.2 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS DNL RD FLR+KMD +GFLP+TLIASF RV++LTTDI+ + A++ S +E+VD
Sbjct: 412 EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVD 471
Query: 82 NFKVNQ 87
KV +
Sbjct: 472 E-KVRR 476
>RGD|1306683 [details] [associations]
symbol:Larp1 "La ribonucleoprotein domain family, member 1"
species:10116 "Rattus norvegicus" [GO:0016239 "positive regulation
of macroautophagy" evidence=ISO] RGD:1306683 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 InterPro:IPR006607 SMART:SM00684
GeneTree:ENSGT00390000000523 IPI:IPI00369227 PRIDE:F1M062
Ensembl:ENSRNOT00000036959 Uniprot:F1M062
Length = 1024
Score = 198 (74.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 39/66 (59%), Positives = 52/66 (78%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS DNL RD FLR+KMD +GFLP+TLIASF RV++LTTDI+ + A++ S +E+V+
Sbjct: 339 EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVE 398
Query: 82 NFKVNQ 87
KV +
Sbjct: 399 E-KVRR 403
>MGI|MGI:1890165 [details] [associations]
symbol:Larp1 "La ribonucleoprotein domain family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0016239 "positive regulation of
macroautophagy" evidence=ISO] MGI:MGI:1890165 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0016239
EMBL:AL672182 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 OrthoDB:EOG4PZJ64 InterPro:IPR006607
SMART:SM00684 HOGENOM:HOG000113283 HOVERGEN:HBG054322 OMA:GSEPATY
EMBL:BC053449 EMBL:AK129202 IPI:IPI00929761 IPI:IPI00929786
UniGene:Mm.248843 ProteinModelPortal:Q6ZQ58 SMR:Q6ZQ58
STRING:Q6ZQ58 PhosphoSite:Q6ZQ58 PaxDb:Q6ZQ58 PRIDE:Q6ZQ58
Ensembl:ENSMUST00000071487 UCSC:uc007jah.2
GeneTree:ENSGT00390000000523 InParanoid:Q6ZQ58 Bgee:Q6ZQ58
CleanEx:MM_LARP1 Genevestigator:Q6ZQ58
GermOnline:ENSMUSG00000037331 Uniprot:Q6ZQ58
Length = 1072
Score = 198 (74.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 39/66 (59%), Positives = 52/66 (78%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS DNL RD FLR+KMD +GFLP+TLIASF RV++LTTDI+ + A++ S +E+V+
Sbjct: 387 EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVE 446
Query: 82 NFKVNQ 87
KV +
Sbjct: 447 E-KVRR 451
>UNIPROTKB|G3V0E9 [details] [associations]
symbol:LARP1B "La-related protein 1B" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 EMBL:CH471056
GO:GO:0030529 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 EMBL:AC096898 EMBL:AC099340 EMBL:AC108045
EMBL:AC114735 EMBL:AC124030 RefSeq:NP_115615.2 UniGene:Hs.657067
GeneID:55132 KEGG:hsa:55132 CTD:55132 HGNC:HGNC:24704
ChiTaRS:LARP1B GenomeRNAi:55132 NextBio:58806
ProteinModelPortal:G3V0E9 SMR:G3V0E9 PRIDE:G3V0E9
Ensembl:ENST00000432347 ArrayExpress:G3V0E9 Bgee:G3V0E9
Uniprot:G3V0E9
Length = 358
Score = 189 (71.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS +NL RD FLR KMD +GFLP++LIA F RV++LTT++N +L A++ S ++E+VD
Sbjct: 224 EYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVD 283
>UNIPROTKB|F1MZU1 [details] [associations]
symbol:LARP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 OMA:GSEPATY
GeneTree:ENSGT00390000000523 EMBL:DAAA02020719 IPI:IPI00714415
PRIDE:F1MZU1 Ensembl:ENSBTAT00000011109 Uniprot:F1MZU1
Length = 951
Score = 196 (74.1 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 39/66 (59%), Positives = 52/66 (78%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS DNL RD FLR+KMD +GFLP+TLIASF RV++LTTDI+ + A++ S +E+V+
Sbjct: 267 EYYFSVDNLERDFFLRRKMDADGFLPMTLIASFHRVQALTTDISLIFAALKDSKVVEIVE 326
Query: 82 NFKVNQ 87
KV +
Sbjct: 327 E-KVRR 331
>UNIPROTKB|G3XAJ5 [details] [associations]
symbol:LARP1B "La-related protein 1B" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 EMBL:CH471056
GO:GO:0030529 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 EMBL:AC096898 EMBL:AC099340 EMBL:AC108045
EMBL:AC114735 EMBL:AC124030 RefSeq:NP_835144.1 UniGene:Hs.657067
GeneID:55132 KEGG:hsa:55132 CTD:55132 HGNC:HGNC:24704
ChiTaRS:LARP1B GenomeRNAi:55132 NextBio:58806
ProteinModelPortal:G3XAJ5 SMR:G3XAJ5 PRIDE:G3XAJ5
Ensembl:ENST00000427266 ArrayExpress:G3XAJ5 Bgee:G3XAJ5
Uniprot:G3XAJ5
Length = 522
Score = 189 (71.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS +NL RD FLR KMD +GFLP++LIA F RV++LTT++N +L A++ S ++E+VD
Sbjct: 224 EYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVD 283
>UNIPROTKB|Q659C4 [details] [associations]
symbol:LARP1B "La-related protein 1B" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 EMBL:AK001240
EMBL:AK027164 EMBL:AK092764 EMBL:AK098437 EMBL:AL137759
EMBL:AL832170 EMBL:BX537937 EMBL:AC096898 EMBL:AC099340
EMBL:AC108045 EMBL:AC114735 EMBL:AC124030 EMBL:BC030516
EMBL:BC050654 EMBL:BC062606 EMBL:BC110300 IPI:IPI00383949
IPI:IPI00855721 IPI:IPI00855786 IPI:IPI00855812 IPI:IPI00855930
IPI:IPI00855953 IPI:IPI00856120 IPI:IPI00940348 IPI:IPI00943149
RefSeq:NP_060548.2 RefSeq:NP_115615.2 RefSeq:NP_835144.1
UniGene:Hs.657067 HSSP:Q71RC2 ProteinModelPortal:Q659C4 SMR:Q659C4
DIP:DIP-47319N IntAct:Q659C4 PhosphoSite:Q659C4 DMDM:158564329
PaxDb:Q659C4 PRIDE:Q659C4 DNASU:55132 Ensembl:ENST00000264584
Ensembl:ENST00000326639 Ensembl:ENST00000354456
Ensembl:ENST00000394288 Ensembl:ENST00000441387 GeneID:55132
KEGG:hsa:55132 UCSC:uc003ifw.1 UCSC:uc003iga.3 UCSC:uc003igc.3
UCSC:uc003igf.3 CTD:55132 GeneCards:GC04P128983 HGNC:HGNC:24704
HPA:HPA036280 neXtProt:NX_Q659C4 PharmGKB:PA165664174
InParanoid:Q659C4 OMA:PPYVKKH OrthoDB:EOG4PZJ64 PhylomeDB:Q659C4
ChiTaRS:LARP1B GenomeRNAi:55132 NextBio:58806 ArrayExpress:Q659C4
Bgee:Q659C4 CleanEx:HS_LARP2 Genevestigator:Q659C4
InterPro:IPR006607 SMART:SM00684 Uniprot:Q659C4
Length = 914
Score = 189 (71.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS +NL RD FLR KMD +GFLP++LIA F RV++LTT++N +L A++ S ++E+VD
Sbjct: 224 EYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVD 283
>WB|WBGene00020097 [details] [associations]
symbol:larp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0034046 "poly(G) RNA binding" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0008266
GO:GO:0002119 GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040035 GO:GO:0000932 GO:GO:0034046
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 GeneTree:ENSGT00390000000523
EMBL:FO080694 ProteinModelPortal:D5MCN2 SMR:D5MCN2 PRIDE:D5MCN2
EnsemblMetazoa:R144.7b KEGG:cel:CELE_R144.7 CTD:175680
WormBase:R144.7b OMA:CAEMNTL ArrayExpress:D5MCN2 Uniprot:D5MCN2
Length = 1150
Score = 183 (69.5 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 40/74 (54%), Positives = 52/74 (70%)
Query: 8 PVTLITSFSHYM--PFEYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDIN 65
PVT T Y+ EYYFS +NL +D FLR+KM PEG+LPV LIASF RVRSLT D +
Sbjct: 573 PVTDDT-LKEYVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYS 631
Query: 66 RVLLAIQKSDKLEL 79
+L A++ S K+++
Sbjct: 632 LILEALKDSTKVDM 645
>POMBASE|SPAC1527.03 [details] [associations]
symbol:SPAC1527.03 "RNA-binding protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005844 "polysome" evidence=ISO] [GO:0006412
"translation" evidence=ISO] PomBase:SPAC1527.03 GO:GO:0005829
EMBL:CU329670 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723
GO:GO:0002181 GO:GO:0005844 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 HSSP:P05455
OrthoDB:EOG46MFST RefSeq:NP_594554.1 ProteinModelPortal:Q9P6K0
EnsemblFungi:SPAC1527.03.1 GeneID:2541645 KEGG:spo:SPAC1527.03
NextBio:20802738 Uniprot:Q9P6K0
Length = 475
Score = 161 (61.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 28/58 (48%), Positives = 45/58 (77%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYFS +NL +D+FLRK MD EG++P+ +ASF+R++S +TD+N + A + SD +++
Sbjct: 334 EYYFSIENLCKDMFLRKHMDDEGYVPLAFLASFNRIKSFSTDLNLLHAACKASDIIDV 391
>TAIR|locus:2156912 [details] [associations]
symbol:LARP1b "AT5G66100" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0010150 "leaf senescence"
evidence=IMP] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0010150
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 EMBL:AY091765 EMBL:AY149955 IPI:IPI00523817
RefSeq:NP_201411.2 UniGene:At.9216 ProteinModelPortal:Q8RWR2
SMR:Q8RWR2 PaxDb:Q8RWR2 PRIDE:Q8RWR2 EnsemblPlants:AT5G66100.1
GeneID:836742 KEGG:ath:AT5G66100 TAIR:At5g66100
HOGENOM:HOG000149120 InParanoid:Q8RWR2 OMA:DQMNDEG PhylomeDB:Q8RWR2
ProtClustDB:CLSN2915016 Genevestigator:Q8RWR2 Uniprot:Q8RWR2
Length = 453
Score = 147 (56.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYFSADNL RD LR +M+ EG++PV +IA+F R+ LT +I +L A++ S+ +E+
Sbjct: 344 EYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEI 401
>TAIR|locus:2125334 [details] [associations]
symbol:LARP1c "La related protein 1c" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0048523 "negative regulation of cellular process" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0010150 "leaf senescence"
evidence=IMP] GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0010150
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
EMBL:AF370207 EMBL:AY133869 IPI:IPI00542126 RefSeq:NP_567991.1
UniGene:At.23352 UniGene:At.70045 ProteinModelPortal:Q94K80
SMR:Q94K80 PRIDE:Q94K80 EnsemblPlants:AT4G35890.1 GeneID:829743
KEGG:ath:AT4G35890 TAIR:At4g35890 HOGENOM:HOG000151189
InParanoid:Q94K80 OMA:MSPRRIS PhylomeDB:Q94K80
ProtClustDB:CLSN2917672 Genevestigator:Q94K80 Uniprot:Q94K80
Length = 523
Score = 142 (55.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
+YYFS +NL+ DI+LR M+ EGF+P+ ++A F +V LT +I +++ A+Q S +E+
Sbjct: 378 QYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQG 437
Query: 82 NF 83
+F
Sbjct: 438 DF 439
>ASPGD|ASPL0000062948 [details] [associations]
symbol:AN1288 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001308 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AACD01000017 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 OrthoDB:EOG46MFST RefSeq:XP_658892.1
EnsemblFungi:CADANIAT00001332 GeneID:2877068 KEGG:ani:AN1288.2
HOGENOM:HOG000208218 OMA:TFSYAQA Uniprot:Q5BDU2
Length = 734
Score = 134 (52.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 4 EGFLPVTLITSFSHYMPFEYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTD 63
E F + +IT + +YYFS DNL +DI+LRK MD +GF+ + +IA+F RV+ L+ D
Sbjct: 568 ESFSVIGMIT-----LQLDYYFSVDNLCKDIYLRKHMDSQGFVALNVIANFKRVKQLSED 622
>UNIPROTKB|E7ERC4 [details] [associations]
symbol:SSB "Lupus La protein" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
GO:GO:0030529 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 EMBL:AC009967 HGNC:HGNC:11316 IPI:IPI00916922
ProteinModelPortal:E7ERC4 SMR:E7ERC4 PRIDE:E7ERC4
Ensembl:ENST00000422006 ArrayExpress:E7ERC4 Bgee:E7ERC4
Uniprot:E7ERC4
Length = 184
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ ++ F+R+ LTTD N ++ A+ KS K EL
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS-KAEL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|E9PFL9 [details] [associations]
symbol:SSB "Lupus La protein" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002344 PRINTS:PR00302 GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
EMBL:AC009967 HGNC:HGNC:11316 IPI:IPI00917205
ProteinModelPortal:E9PFL9 SMR:E9PFL9 PRIDE:E9PFL9
Ensembl:ENST00000413002 ArrayExpress:E9PFL9 Bgee:E9PFL9
Uniprot:E9PFL9
Length = 134
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ ++ F+R+ LTTD N ++ A+ KS K EL
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS-KAEL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|F1S1V1 [details] [associations]
symbol:SSB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:ENAEMKS EMBL:CU466304
Ensembl:ENSSSCT00000017354 Uniprot:F1S1V1
Length = 402
Score = 123 (48.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ ++ F+R+ LTTD N ++ A+ KS K EL
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIIEALSKS-KAEL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|E9PFH8 [details] [associations]
symbol:SSB "Lupus La protein" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 EMBL:AC009967 HGNC:HGNC:11316 IPI:IPI00916802
ProteinModelPortal:E9PFH8 SMR:E9PFH8 PRIDE:E9PFH8
Ensembl:ENST00000409005 ArrayExpress:E9PFH8 Bgee:E9PFH8
Uniprot:E9PFH8
Length = 361
Score = 122 (48.0 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ ++ F+R+ LTTD N ++ A+ KS K EL
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS-KAEL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|P10881 [details] [associations]
symbol:SSB "Lupus La protein homolog" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 KO:K11090 Pfam:PF05383 SMART:SM00715
InterPro:IPR014886 Pfam:PF08777 GeneTree:ENSGT00530000063464
EMBL:X13698 EMBL:BC103234 IPI:IPI00687044 PIR:S03849
RefSeq:NP_788838.1 UniGene:Bt.15513 ProteinModelPortal:P10881
SMR:P10881 STRING:P10881 PRIDE:P10881 Ensembl:ENSBTAT00000011484
GeneID:338071 KEGG:bta:338071 CTD:6741 HOGENOM:HOG000006947
HOVERGEN:HBG001407 OMA:ENAEMKS NextBio:20812521 Uniprot:P10881
Length = 404
Score = 122 (48.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ ++ F+R+ LTTD N ++ A+ KS K EL
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS-KAEL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|E2RH09 [details] [associations]
symbol:SSB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 KO:K11090 Pfam:PF05383
SMART:SM00715 InterPro:IPR014886 Pfam:PF08777
GeneTree:ENSGT00530000063464 CTD:6741 OMA:ENAEMKS EMBL:AAEX03017743
RefSeq:XP_535952.2 ProteinModelPortal:E2RH09
Ensembl:ENSCAFT00000038572 GeneID:478787 KEGG:cfa:478787
Uniprot:E2RH09
Length = 406
Score = 122 (48.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ ++ F+R+ LTTD N ++ A+ KS K EL
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS-KAEL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|P05455 [details] [associations]
symbol:SSB "Lupus La protein" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=TAS] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0006400 "tRNA modification"
evidence=TAS] [GO:0008334 "histone mRNA metabolic process"
evidence=TAS] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:CH471058 GO:GO:0030529 GO:GO:0006400 GO:GO:0000049
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 KO:K11090
Pfam:PF05383 SMART:SM00715 InterPro:IPR014886 Pfam:PF08777 CTD:6741
HOGENOM:HOG000006947 HOVERGEN:HBG001407 OMA:ENAEMKS EMBL:X13697
EMBL:J04205 EMBL:BT009862 EMBL:AB451228 EMBL:AC009967 EMBL:BC001289
EMBL:BC020818 EMBL:M20328 IPI:IPI00009032 PIR:A31888
RefSeq:NP_003133.1 UniGene:Hs.632535 PDB:1OWX PDB:1S79 PDB:1S7A
PDB:1YTY PDB:1ZH5 PDB:2VOD PDB:2VON PDB:2VOO PDB:2VOP PDBsum:1OWX
PDBsum:1S79 PDBsum:1S7A PDBsum:1YTY PDBsum:1ZH5 PDBsum:2VOD
PDBsum:2VON PDBsum:2VOO PDBsum:2VOP DisProt:DP00229
ProteinModelPortal:P05455 SMR:P05455 DIP:DIP-29750N IntAct:P05455
MINT:MINT-5002383 STRING:P05455 PhosphoSite:P05455 DMDM:125985
PaxDb:P05455 PeptideAtlas:P05455 PRIDE:P05455 DNASU:6741
Ensembl:ENST00000260956 Ensembl:ENST00000409333 GeneID:6741
KEGG:hsa:6741 UCSC:uc002ufk.3 GeneCards:GC02P170619 HGNC:HGNC:11316
HPA:CAB004643 HPA:HPA012385 HPA:HPA017287 MIM:109090
neXtProt:NX_P05455 PharmGKB:PA36140 InParanoid:P05455
OrthoDB:EOG4C2HB3 PhylomeDB:P05455 EvolutionaryTrace:P05455
GenomeRNAi:6741 NextBio:26296 PMAP-CutDB:P05455 ArrayExpress:P05455
Bgee:P05455 CleanEx:HS_SSB Genevestigator:P05455
GermOnline:ENSG00000138385 GO:GO:0008334 Uniprot:P05455
Length = 408
Score = 122 (48.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ ++ F+R+ LTTD N ++ A+ KS K EL
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS-KAEL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>FB|FBgn0011638 [details] [associations]
symbol:La "La autoantigen-like" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0008098
"5S rRNA primary transcript binding" evidence=NAS;IDA] [GO:0003729
"mRNA binding" evidence=ISS;NAS] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
EMBL:AE014134 GO:GO:0000166 GO:GO:0003677 GO:GO:0003729
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 KO:K11090 Pfam:PF05383 SMART:SM00715
InterPro:IPR014886 Pfam:PF08777 GeneTree:ENSGT00530000063464
EMBL:U07652 EMBL:L32988 PIR:A53773 PIR:A53781 RefSeq:NP_477014.1
RefSeq:NP_724257.1 UniGene:Dm.4836 ProteinModelPortal:P40796
SMR:P40796 DIP:DIP-19001N IntAct:P40796 MINT:MINT-785398
STRING:P40796 PaxDb:P40796 EnsemblMetazoa:FBtr0081373
EnsemblMetazoa:FBtr0081374 GeneID:35305 KEGG:dme:Dmel_CG10922
CTD:35305 FlyBase:FBgn0011638 InParanoid:P40796 OMA:EHNEERR
OrthoDB:EOG4GF1X7 PhylomeDB:P40796 GenomeRNAi:35305 NextBio:792866
Bgee:P40796 GermOnline:CG10922 GO:GO:0008098 Uniprot:P40796
Length = 390
Score = 121 (47.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 22/57 (38%), Positives = 43/57 (75%)
Query: 22 EYYFSADNLVRDIFLRKKM--DPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDK 76
EYYF NL RD FLR+++ + +G++P++++ +F R+ SL+TD++ ++ A+ KS++
Sbjct: 59 EYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEE 115
>DICTYBASE|DDB_G0281763 [details] [associations]
symbol:DDB_G0281763 "Lupus La protein" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 PRINTS:PR00302 SMART:SM00360
dictyBase:DDB_G0281763 GO:GO:0005634 GO:GO:0045335 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 EMBL:AAFI02000042 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 KO:K11090
Pfam:PF05383 SMART:SM00715 InterPro:IPR014886 Pfam:PF08777
RefSeq:XP_640625.1 ProteinModelPortal:Q54TG6 STRING:Q54TG6
EnsemblProtists:DDB0233755 GeneID:8623235 KEGG:ddi:DDB_G0281763
InParanoid:Q54TG6 OMA:NDDANAC ProtClustDB:CLSZ2430537
Uniprot:Q54TG6
Length = 354
Score = 120 (47.3 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 23/66 (34%), Positives = 46/66 (69%)
Query: 22 EYYFSADNLVRDIFLRKKM--DPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYFS N RD FLR + + + ++ + +IASF+R+++++TD+ + A++KS +L++
Sbjct: 14 EYYFSDSNFPRDKFLRSEAAKNVDNYISIDVIASFNRMKTISTDLQLITEALKKSTRLQV 73
Query: 80 VDNFKV 85
++ K+
Sbjct: 74 SEDGKM 79
>FB|FBgn0035424 [details] [associations]
symbol:CG11505 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
EMBL:AE014296 GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 HSSP:Q71RC2
GeneTree:ENSGT00530000063417 EMBL:BT010118 RefSeq:NP_647793.1
RefSeq:NP_728843.1 RefSeq:NP_995985.2 ProteinModelPortal:Q9I7T7
SMR:Q9I7T7 IntAct:Q9I7T7 MINT:MINT-298656 STRING:Q9I7T7
PaxDb:Q9I7T7 EnsemblMetazoa:FBtr0073046 GeneID:38399
KEGG:dme:Dmel_CG11505 UCSC:CG11505-RB FlyBase:FBgn0035424
InParanoid:Q9VZS2 OMA:TPNINAS OrthoDB:EOG4V15H8 PhylomeDB:Q9I7T7
ChiTaRS:CG11505 GenomeRNAi:38399 NextBio:808431 Bgee:Q9I7T7
Uniprot:Q9I7T7
Length = 1531
Score = 128 (50.1 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYYFS +NL D +L +MD + ++P+ +A F+ VR LT DIN + +++S +++ D
Sbjct: 277 EYYFSRENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLRESPNVQVDD 336
>DICTYBASE|DDB_G0289333 [details] [associations]
symbol:DDB_G0289333 species:44689 "Dictyostelium
discoideum" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0289333 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
EMBL:AAFI02000139 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 eggNOG:NOG327281 RefSeq:XP_636262.1
ProteinModelPortal:Q54HN9 EnsemblProtists:DDB0188365 GeneID:8627081
KEGG:ddi:DDB_G0289333 InParanoid:Q54HN9 OMA:YADMIAM
ProtClustDB:CLSZ2846640 Uniprot:Q54HN9
Length = 621
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
EYY S +NL D +L +M+ E F+ + +IA+F V++LTTD+N ++ + KS + ++D
Sbjct: 31 EYYLSRENLSTDYYLTSRMNNEMFVAIEVIANFKMVKNLTTDMNLIVEVMSKSSNV-IID 89
Query: 82 NFK 84
K
Sbjct: 90 ETK 92
>UNIPROTKB|F1NWE6 [details] [associations]
symbol:LARP6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR002344 InterPro:IPR012677 PRINTS:PR00302
GO:GO:0005634 GO:GO:0005794 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
GO:GO:0030529 InterPro:IPR024642 Pfam:PF12901 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 OMA:TSGGENE
GeneTree:ENSGT00510000048191 EMBL:AADN02040372 EMBL:AADN02040373
EMBL:AADN02040374 EMBL:AADN02040375 EMBL:AADN02040376
EMBL:AADN02040377 EMBL:AADN02040378 EMBL:AADN02040379
IPI:IPI00582301 Ensembl:ENSGALT00000006440 Uniprot:F1NWE6
Length = 444
Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYFS +NL +D FL K + + G++ V L+ SF +V+ LT D A++ SD LEL
Sbjct: 56 EYYFSDENLEKDAFLLKHVRRNKMGYVSVKLLTSFKKVKHLTRDWRTTTHALKYSDMLEL 115
Query: 80 VD-NFKVNQ 87
D N KV +
Sbjct: 116 NDDNRKVRR 124
>MGI|MGI:98423 [details] [associations]
symbol:Ssb "Sjogren syndrome antigen B" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 MGI:MGI:98423 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 KO:K11090 Pfam:PF05383 SMART:SM00715
InterPro:IPR014886 Pfam:PF08777 CTD:6741 HOGENOM:HOG000006947
HOVERGEN:HBG001407 OMA:ENAEMKS OrthoDB:EOG4C2HB3 EMBL:L00993
EMBL:BC003820 EMBL:Y07951 IPI:IPI00134300 RefSeq:NP_001103615.1
RefSeq:NP_033304.1 UniGene:Mm.10508 ProteinModelPortal:P32067
SMR:P32067 DIP:DIP-37706N IntAct:P32067 STRING:P32067
PhosphoSite:P32067 PaxDb:P32067 PRIDE:P32067
Ensembl:ENSMUST00000090852 Ensembl:ENSMUST00000166411 GeneID:20823
KEGG:mmu:20823 InParanoid:P32067 ChiTaRS:SSB NextBio:299565
Bgee:P32067 CleanEx:MM_SSB Genevestigator:P32067
GermOnline:ENSMUSG00000068882 Uniprot:P32067
Length = 415
Score = 116 (45.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ + F+R+ LTTD N ++ A+ KS K +L
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLETMIKFNRLNRLTTDFNVIVQALSKS-KAKL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|F1MAB1 [details] [associations]
symbol:Ssb "Lupus La protein homolog" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002344 InterPro:IPR012677 PRINTS:PR00302 RGD:620804
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR014886 Pfam:PF08777 IPI:IPI00196913 PRIDE:F1MAB1
Ensembl:ENSRNOT00000010625 ArrayExpress:F1MAB1 Uniprot:F1MAB1
Length = 381
Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ + F+R+ LTTD N ++ A+ KS K L
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLETMIKFNRLNRLTTDFNVIVQALSKS-KANL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|E1BVY8 [details] [associations]
symbol:LOC420093 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002344 PRINTS:PR00302 GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00510000048191 EMBL:AADN02072211 IPI:IPI00821190
Ensembl:ENSGALT00000041247 Uniprot:E1BVY8
Length = 173
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 22 EYYFSADNLVRDIFLRKKMDPE--GFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+Y S +NL +D FL K + GF+ + L+ SF +V+ LT D L A++ S LE+
Sbjct: 86 EFYLSDENLAKDAFLLKHVQKNKLGFVSIKLLTSFKKVKYLTRDWRLTLYALRFSKLLEV 145
Query: 80 -VDNFKVNQIIVIADT 94
+ KV + + I D+
Sbjct: 146 NQEGTKVRRRVPIPDS 161
>RGD|620804 [details] [associations]
symbol:Ssb "Sjogren syndrome antigen B" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 RGD:620804 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0030529 GO:GO:0008033
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 InterPro:IPR014886 Pfam:PF08777 HOGENOM:HOG000006947
HOVERGEN:HBG001407 OrthoDB:EOG4C2HB3 EMBL:X67859 IPI:IPI00212219
PIR:JC1494 UniGene:Rn.24494 ProteinModelPortal:P38656 SMR:P38656
DIP:DIP-46500N STRING:P38656 PhosphoSite:P38656 PRIDE:P38656
UCSC:RGD:620804 InParanoid:P38656 ArrayExpress:P38656
Genevestigator:P38656 GermOnline:ENSRNOG00000007998 Uniprot:P38656
Length = 415
Score = 115 (45.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ + F+R+ LTTD N ++ A+ KS K L
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLETMIKFNRLNRLTTDFNVIVQALSKS-KANL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|Q66HM7 [details] [associations]
symbol:Ssb "Sjogren syndrome antigen B" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
RGD:620804 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
GO:GO:0030529 EMBL:CH473949 InterPro:IPR006630 PROSITE:PS50961
KO:K11090 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 CTD:6741
HOVERGEN:HBG001407 OMA:ENAEMKS UniGene:Rn.24494 EMBL:BC081780
IPI:IPI00471902 RefSeq:NP_112381.2 SMR:Q66HM7 STRING:Q66HM7
Ensembl:ENSRNOT00000011174 GeneID:81783 KEGG:rno:81783
InParanoid:Q66HM7 NextBio:615635 Genevestigator:Q66HM7
Uniprot:Q66HM7
Length = 415
Score = 115 (45.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL RD FL++ K+D EG++P+ + F+R+ LTTD N ++ A+ KS K L
Sbjct: 22 EYYFGDFNLPRDKFLKEQIKLD-EGWVPLETMIKFNRLNRLTTDFNVIVQALSKS-KANL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>FB|FBgn0260771 [details] [associations]
symbol:Larp7 "La related protein 7" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0097322 "7SK snRNA binding" evidence=IDA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
EMBL:AE014298 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 KO:K15191
InterPro:IPR014886 Pfam:PF08777 GeneTree:ENSGT00530000063464
GO:GO:0097322 EMBL:AY061107 RefSeq:NP_524795.2 UniGene:Dm.31047
SMR:Q9W362 IntAct:Q9W362 STRING:Q9W362 EnsemblMetazoa:FBtr0301275
GeneID:44900 KEGG:dme:Dmel_CG42569 UCSC:CG12058-RA
FlyBase:FBgn0260771 InParanoid:Q9W362 OMA:PGLIVEC OrthoDB:EOG4CVDQ5
GenomeRNAi:44900 NextBio:837804 Uniprot:Q9W362
Length = 595
Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 22/73 (30%), Positives = 45/73 (61%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E+YF NL +D FLR+ ++ + ++P+ + +F+++++LT D+ ++ A+ S LEL +
Sbjct: 68 EFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELDE 127
Query: 82 N-FKVNQIIVIAD 93
KV + + D
Sbjct: 128 TELKVKRRTKLPD 140
>SGD|S000000542 [details] [associations]
symbol:SRO9 "Cytoplasmic RNA-binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0002181 "cytoplasmic translation"
evidence=IPI] [GO:0003723 "RNA binding" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005844 "polysome"
evidence=IDA] SGD:S000000542 GO:GO:0005737 EMBL:X59720
EMBL:BK006937 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723
GO:GO:0002181 GO:GO:0005844 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00530000067375 OrthoDB:EOG46MFST PIR:S19365
RefSeq:NP_009893.2 ProteinModelPortal:P25567 SMR:P25567
DIP:DIP-6638N IntAct:P25567 MINT:MINT-633857 STRING:P25567
PaxDb:P25567 PeptideAtlas:P25567 EnsemblFungi:YCL037C GeneID:850320
KEGG:sce:YCL037C CYGD:YCL037c HOGENOM:HOG000057093 OMA:VSTISIE
NextBio:965730 Genevestigator:P25567 GermOnline:YCL037C
Uniprot:P25567
Length = 434
Score = 113 (44.8 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTT--DINRVLLAIQK 73
EYYFS +NL D +LR K+ +GF P++LI+ F RV +++ D N +L A+++
Sbjct: 270 EYYFSEENLTVDNYLRSKLSKDGFAPLSLISKFYRVVNMSFGGDTNLILAALRE 323
>FB|FBgn0033936 [details] [associations]
symbol:CG17386 species:7227 "Drosophila melanogaster"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR012677
EMBL:AE013599 GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR024642 Pfam:PF12901
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
eggNOG:NOG239004 GeneTree:ENSGT00510000048191 EMBL:BT044172
RefSeq:NP_610964.1 UniGene:Dm.24512 SMR:A1Z9R1
EnsemblMetazoa:FBtr0087488 GeneID:36605 KEGG:dme:Dmel_CG17386
UCSC:CG17386-RA FlyBase:FBgn0033936 InParanoid:A1Z9R1 OMA:RTIVACD
OrthoDB:EOG4D51CP GenomeRNAi:36605 NextBio:799463 Uniprot:A1Z9R1
Length = 867
Score = 116 (45.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQ-KSDKLE 78
E+YFS +++++D FL K + + EGF+ + L++SF RVR LT + V A++ KS K+E
Sbjct: 290 EFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRKSRKIE 349
Query: 79 LVD-NFKVNQI 88
L D KV +I
Sbjct: 350 LNDVGTKVRRI 360
>ZFIN|ZDB-GENE-030131-223 [details] [associations]
symbol:ssb "Sjogren syndrome antigen B (autoantigen
La)" species:7955 "Danio rerio" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-030131-223 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 KO:K11090 Pfam:PF05383 SMART:SM00715
HSSP:P05455 InterPro:IPR014886 Pfam:PF08777
GeneTree:ENSGT00530000063464 CTD:6741 HOGENOM:HOG000006947
HOVERGEN:HBG001407 OMA:ENAEMKS OrthoDB:EOG4C2HB3 EMBL:CABZ01067486
EMBL:BC045392 IPI:IPI00506214 RefSeq:NP_955841.1 UniGene:Dr.3463
SMR:Q7ZTI0 STRING:Q7ZTI0 Ensembl:ENSDART00000041627 GeneID:321504
KEGG:dre:321504 InParanoid:Q7ZTI0 NextBio:20807405 Uniprot:Q7ZTI0
Length = 401
Score = 97 (39.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 19/54 (35%), Positives = 38/54 (70%)
Query: 22 EYYFSADNLVRDIFLRKKMD-PEGFLPVTLIASFSRVRSLTTDINRVLLAIQKS 74
EYYF NL RD FL++++ +G++P+ + F+R++SLT++ + ++ ++ KS
Sbjct: 19 EYYFGDHNLPRDKFLKEQLQLDDGWVPLETMLKFNRLKSLTSEESVIVESLLKS 72
Score = 34 (17.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 80 VDNFKVNQIIVI 91
+ NFK N++IV+
Sbjct: 170 IKNFKGNEMIVM 181
>TAIR|locus:2170478 [details] [associations]
symbol:LARP6a "La related protein 6a" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0048193
"Golgi vesicle transport" evidence=RCA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
GO:GO:0030529 HSSP:P19339 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 KO:K15191 HOGENOM:HOG000244026
EMBL:AY050403 EMBL:BT000588 IPI:IPI00526923 RefSeq:NP_851141.1
UniGene:At.9180 ProteinModelPortal:Q94A38 SMR:Q94A38 IntAct:Q94A38
STRING:Q94A38 PRIDE:Q94A38 EnsemblPlants:AT5G46250.1 GeneID:834667
KEGG:ath:AT5G46250 TAIR:At5g46250 InParanoid:Q94A38 OMA:WRNGMRV
PhylomeDB:Q94A38 ProtClustDB:CLSN2680453 Genevestigator:Q94A38
Uniprot:Q94A38
Length = 422
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 22 EYYFSADNLVRDIFLRKKM--DPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYFS +NL D FL M + +GF+P++ IA+F +++ LT D ++ A+++S L +
Sbjct: 112 EYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVV 171
Query: 80 -VDNFKVNQI 88
D KV ++
Sbjct: 172 SADEKKVKRL 181
>WB|WBGene00016653 [details] [associations]
symbol:C44E4.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0008406 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
EMBL:FO080862 GO:GO:0030529 GO:GO:0040027 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 KO:K11090 Pfam:PF05383 SMART:SM00715
InterPro:IPR014886 Pfam:PF08777 GeneTree:ENSGT00530000063464
PIR:T30953 RefSeq:NP_491411.1 ProteinModelPortal:O01806 SMR:O01806
STRING:O01806 PaxDb:O01806 EnsemblMetazoa:C44E4.4 GeneID:172070
KEGG:cel:CELE_C44E4.4 UCSC:C44E4.4 CTD:172070 WormBase:C44E4.4
HOGENOM:HOG000022257 InParanoid:O01806 OMA:KSANSEI NextBio:873891
Uniprot:O01806
Length = 396
Score = 108 (43.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 20/54 (37%), Positives = 38/54 (70%)
Query: 22 EYYFSADNLVRDIFLRKKM-DPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKS 74
EYYF NL RD FL++K+ + +G++P+T + +F+R+ S++ D ++ A++ S
Sbjct: 21 EYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANAVKNS 74
>UNIPROTKB|Q96J85 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 EMBL:AC090058 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HOGENOM:HOG000004803
UniGene:Hs.26613 DNASU:113251 GeneID:113251 KEGG:hsa:113251
CTD:113251 HGNC:HGNC:24320 PharmGKB:PA142671566 ChiTaRS:LARP4
GenomeRNAi:113251 NextBio:78808 RefSeq:NP_001164275.1 EMBL:AY004310
IPI:IPI01012507 SMR:Q96J85 STRING:Q96J85 Ensembl:ENST00000518561
HOVERGEN:HBG062469 Uniprot:Q96J85
Length = 375
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 58 EFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 115
>UNIPROTKB|H9KZD5 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] InterPro:IPR000504
SMART:SM00360 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00530000063417 OMA:WTIANME EMBL:AADN02072425
EMBL:AADN02072426 Ensembl:ENSGALT00000009951 Uniprot:H9KZD5
Length = 750
Score = 110 (43.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 19/58 (32%), Positives = 39/58 (67%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ IA+ ++ LTTD++ +L ++ S +++
Sbjct: 128 EFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQV 185
>UNIPROTKB|E9PDG5 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 EMBL:AC090058 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 UniGene:Hs.26613
DNASU:113251 GeneID:113251 KEGG:hsa:113251 CTD:113251
HGNC:HGNC:24320 ChiTaRS:LARP4 GenomeRNAi:113251 NextBio:78808
IPI:IPI00418689 RefSeq:NP_001164275.1 ProteinModelPortal:E9PDG5
SMR:E9PDG5 Ensembl:ENST00000522085 ArrayExpress:E9PDG5 Bgee:E9PDG5
Uniprot:E9PDG5
Length = 445
Score = 107 (42.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 128 EFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 185
>ZFIN|ZDB-GENE-030131-6403 [details] [associations]
symbol:larp6 "La ribonucleoprotein domain family,
member 6" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IMP]
InterPro:IPR002344 InterPro:IPR012677 PRINTS:PR00302
ZFIN:ZDB-GENE-030131-6403 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0001756 GO:GO:0030529
InterPro:IPR024642 Pfam:PF12901 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 CTD:55323 HOGENOM:HOG000010108
HOVERGEN:HBG070244 OMA:TSGGENE EMBL:BC056595 IPI:IPI00487082
RefSeq:NP_956197.1 UniGene:Dr.6975 ProteinModelPortal:Q6PHD4
GeneID:334471 KEGG:dre:334471 InParanoid:Q6PHD4 NextBio:20810417
ArrayExpress:Q6PHD4 Uniprot:Q6PHD4
Length = 485
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYY S +NL D FL K + + GF+ V L+ SF +V+ LT D A++ S+ LEL
Sbjct: 87 EYYLSDENLEHDAFLLKHVRRNKLGFVSVKLLTSFKKVKHLTRDWRTTAYALRHSNLLEL 146
Query: 80 VD 81
D
Sbjct: 147 ND 148
>UNIPROTKB|Q5ZKS1 [details] [associations]
symbol:SSB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002344 PRINTS:PR00302 GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 GeneTree:ENSGT00530000063464 HOGENOM:HOG000006947
OrthoDB:EOG4C2HB3 EMBL:AADN02020271 EMBL:AJ720013 IPI:IPI00599030
UniGene:Gga.42753 UniGene:Gga.53297 SMR:Q5ZKS1 STRING:Q5ZKS1
Ensembl:ENSGALT00000015751 HOVERGEN:HBG059895 InParanoid:Q5ZKS1
Uniprot:Q5ZKS1
Length = 137
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKS 74
EYYF NL RD FL++ K+D +G++P+ ++ F+R+ L+ D ++ A++KS
Sbjct: 22 EYYFGNHNLPRDKFLKEQIKLD-DGWVPLEVMIKFNRLSRLSKDFGVIVEALRKS 75
>UNIPROTKB|D6RAF3 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002344 PRINTS:PR00302
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HGNC:HGNC:24912
ChiTaRS:LARP7 EMBL:AC106864 IPI:IPI00966387
ProteinModelPortal:D6RAF3 SMR:D6RAF3 Ensembl:ENST00000507443
HOGENOM:HOG000213946 ArrayExpress:D6RAF3 Bgee:D6RAF3 Uniprot:D6RAF3
Length = 129
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 43 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVEL 102
>UNIPROTKB|D6RF49 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002344 PRINTS:PR00302
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HGNC:HGNC:24912
ChiTaRS:LARP7 EMBL:AC106864 IPI:IPI00967495
ProteinModelPortal:D6RF49 SMR:D6RF49 Ensembl:ENST00000508577
ArrayExpress:D6RF49 Bgee:D6RF49 Uniprot:D6RF49
Length = 119
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 43 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVEL 102
>UNIPROTKB|F1M4K9 [details] [associations]
symbol:LOC683071 "Protein LOC683071" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 IPI:IPI00952080
Ensembl:ENSRNOT00000065149 Uniprot:F1M4K9
Length = 574
Score = 107 (42.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E FS +NL +D++L +MD + F+P+ IA+ ++ LTTD + +L ++ S +++ +
Sbjct: 24 ESCFSRENLSKDLYLISQMDSDQFVPIWTIANMEEIKKLTTDPDLILEVLRSSPMVQVDE 83
Query: 82 NFKV 85
KV
Sbjct: 84 GEKV 87
>UNIPROTKB|G3XAA8 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 EMBL:CH471111 GO:GO:0030529
EMBL:AC090058 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 RefSeq:NP_001164279.1 UniGene:Hs.26613 GeneID:113251
KEGG:hsa:113251 CTD:113251 HGNC:HGNC:24320 ChiTaRS:LARP4
GenomeRNAi:113251 NextBio:78808 ProteinModelPortal:G3XAA8
SMR:G3XAA8 PRIDE:G3XAA8 Ensembl:ENST00000293618 ArrayExpress:G3XAA8
Bgee:G3XAA8 Uniprot:G3XAA8
Length = 653
Score = 107 (42.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 128 EFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 185
>RGD|1592944 [details] [associations]
symbol:LOC680385 "similar to Sjogren syndrome antigen B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
RGD:1592944 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
GO:GO:0030529 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 InterPro:IPR014886 Pfam:PF08777
GeneTree:ENSGT00530000063464 OrthoDB:EOG4C2HB3 IPI:IPI00767397
RefSeq:XP_001058361.1 RefSeq:XP_002726506.1 PRIDE:D3ZLH9
Ensembl:ENSRNOT00000015427 GeneID:680385 KEGG:rno:680385
UCSC:RGD:1592944 OMA:ATESEKC NextBio:718589 Uniprot:D3ZLH9
Length = 402
Score = 104 (41.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYF NL +D FL++ K+D EG++ + + F+R+ LTTD N ++ A+ KS K +L
Sbjct: 22 EYYFGDFNLPQDKFLKEQIKLD-EGWVSLETMIKFNRLNRLTTDFNVIVQALSKS-KAKL 79
Query: 80 VD 81
++
Sbjct: 80 ME 81
>UNIPROTKB|F1SH87 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022604 "regulation of cell morphogenesis"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417
EMBL:AEMK01178304 EMBL:CU856260 EMBL:CU984599
Ensembl:ENSSSCT00000000235 OMA:CKEYEIM Uniprot:F1SH87
Length = 699
Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 126 EFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 183
>UNIPROTKB|E2R028 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022604 "regulation of cell morphogenesis"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417 CTD:113251
EMBL:AAEX03015048 EMBL:AAEX03015046 EMBL:AAEX03015047
RefSeq:XP_534803.2 Ensembl:ENSCAFT00000013044 GeneID:477609
KEGG:cfa:477609 Uniprot:E2R028
Length = 721
Score = 107 (42.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 125 EFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 182
>UNIPROTKB|F1PIU8 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417 OMA:WTIANME
EMBL:AAEX03015048 EMBL:AAEX03015046 EMBL:AAEX03015047
Ensembl:ENSCAFT00000013013 Uniprot:F1PIU8
Length = 723
Score = 107 (42.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 127 EFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 184
>UNIPROTKB|Q71RC2 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IMP] [GO:0022604 "regulation
of cell morphogenesis" evidence=IMP] InterPro:IPR000504
PROSITE:PS50102 SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 EMBL:CH471111 GO:GO:0022604
EMBL:AC090058 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 eggNOG:NOG327281 HOGENOM:HOG000004803
HOVERGEN:HBG055137 EMBL:AK055521 EMBL:AK125113 EMBL:AK291746
EMBL:AF370416 EMBL:BX647457 EMBL:CR936626 IPI:IPI00043638
IPI:IPI00395347 IPI:IPI00797384 IPI:IPI00982060
RefSeq:NP_001164279.1 RefSeq:NP_443111.4 RefSeq:NP_954658.2
UniGene:Hs.26613 PDB:2CQK PDB:3PKN PDBsum:2CQK PDBsum:3PKN
ProteinModelPortal:Q71RC2 SMR:Q71RC2 IntAct:Q71RC2 STRING:Q71RC2
PhosphoSite:Q71RC2 DMDM:189047131 PaxDb:Q71RC2 PRIDE:Q71RC2
DNASU:113251 Ensembl:ENST00000347328 Ensembl:ENST00000398473
Ensembl:ENST00000429001 Ensembl:ENST00000518444
Ensembl:ENST00000520064 GeneID:113251 KEGG:hsa:113251
UCSC:uc001rwm.3 UCSC:uc001rws.2 UCSC:uc009zlr.1 CTD:113251
GeneCards:GC12P050794 HGNC:HGNC:24320 HPA:HPA039306 HPA:HPA039673
neXtProt:NX_Q71RC2 PharmGKB:PA142671566 OMA:WTIANME ChiTaRS:LARP4
EvolutionaryTrace:Q71RC2 GenomeRNAi:113251 NextBio:78808
PMAP-CutDB:Q71RC2 ArrayExpress:Q71RC2 Bgee:Q71RC2 CleanEx:HS_LARP4
Genevestigator:Q71RC2 GermOnline:ENSG00000161813 Uniprot:Q71RC2
Length = 724
Score = 107 (42.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 128 EFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 185
>UNIPROTKB|F1MHD9 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022604 "regulation of cell morphogenesis"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417 OMA:WTIANME
EMBL:DAAA02012927 IPI:IPI01002357 Ensembl:ENSBTAT00000022821
Uniprot:F1MHD9
Length = 621
Score = 106 (42.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTTD + +L ++ S +++
Sbjct: 127 EFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV 184
>TAIR|locus:2051734 [details] [associations]
symbol:LARP6b "AT2G43970" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002344 InterPro:IPR012677 PRINTS:PR00302 GO:GO:0005634
EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
EMBL:AC004005 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 KO:K15191 UniGene:At.20914 EMBL:AF332565
EMBL:AF375410 EMBL:AF367277 EMBL:AY056238 EMBL:AY129474
IPI:IPI00531024 PIR:T00677 RefSeq:NP_566004.1 UniGene:At.20070
UniGene:At.74750 UniGene:At.74872 UniGene:At.74992
ProteinModelPortal:O80567 SMR:O80567 IntAct:O80567 PRIDE:O80567
EnsemblPlants:AT2G43970.1 GeneID:819002 KEGG:ath:AT2G43970
TAIR:At2g43970 HOGENOM:HOG000244026 InParanoid:O80567 OMA:HEEDDAT
PhylomeDB:O80567 ProtClustDB:CLSN2688918 ArrayExpress:O80567
Genevestigator:O80567 Uniprot:O80567
Length = 545
Score = 105 (42.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 22 EYYFSADNLVRDIFLRKKM--DPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EYYFS NL L + + DPEG++P+ ++ASF +++++ + +++ +Q S KL +
Sbjct: 202 EYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFV 261
Query: 80 V-DNFKVNQIIVIADT 94
D KV +I I ++
Sbjct: 262 SEDGKKVRRISPITES 277
>UNIPROTKB|F1NJ86 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00530000063464 EMBL:AADN02009328 IPI:IPI00598515
Ensembl:ENSGALT00000032138 ArrayExpress:F1NJ86 Uniprot:F1NJ86
Length = 233
Score = 99 (39.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 45 DFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVEL 104
>UNIPROTKB|F1P301 [details] [associations]
symbol:SSB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00530000063464 EMBL:AADN02020271 IPI:IPI01017187
Ensembl:ENSGALT00000038515 ArrayExpress:F1P301 Uniprot:F1P301
Length = 205
Score = 97 (39.2 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKS 74
EYYF NL RD FL++ K+D +G++P+ ++ F+R+ L+ D ++ A++KS
Sbjct: 22 EYYFGNHNLPRDKFLKEQIKLD-DGWVPLEVMIKFNRLSRLSKDFGVIVEALRKS 75
>UNIPROTKB|F1MBD0 [details] [associations]
symbol:LARP6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002344 InterPro:IPR012677
PRINTS:PR00302 GO:GO:0005634 GO:GO:0005794 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR024642
Pfam:PF12901 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 OMA:TSGGENE GeneTree:ENSGT00510000048191
EMBL:DAAA02027971 IPI:IPI00826749 Ensembl:ENSBTAT00000005109
ArrayExpress:F1MBD0 Uniprot:F1MBD0
Length = 425
Score = 102 (41.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+YFS +NL +D FL K + + G++ V L+ SF +V+ LT D A++ S LEL
Sbjct: 34 EFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLEL 93
Query: 80 -VDNFKVNQ 87
D+ KV +
Sbjct: 94 NEDHRKVRR 102
>UNIPROTKB|F1PKV9 [details] [associations]
symbol:LARP6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002344 InterPro:IPR012677
PRINTS:PR00302 GO:GO:0005634 GO:GO:0005794 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR024642
Pfam:PF12901 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 OMA:TSGGENE GeneTree:ENSGT00510000048191
EMBL:AAEX03016265 Ensembl:ENSCAFT00000027928 Uniprot:F1PKV9
Length = 428
Score = 102 (41.0 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+YFS +NL +D FL K + + G++ V L+ SF +V+ LT D A++ S LEL
Sbjct: 37 EFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLEL 96
Query: 80 -VDNFKVNQ 87
D+ KV +
Sbjct: 97 NEDHRKVRR 105
>TAIR|locus:2089508 [details] [associations]
symbol:LARP6c "La related protein 6c" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR009818
Pfam:PF07145 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 KO:K15191 HOGENOM:HOG000244026 EMBL:AP002041
IPI:IPI00538604 RefSeq:NP_188540.1 UniGene:At.53384
ProteinModelPortal:Q9LHL3 SMR:Q9LHL3 PRIDE:Q9LHL3
EnsemblPlants:AT3G19090.1 GeneID:821444 KEGG:ath:AT3G19090
TAIR:At3g19090 eggNOG:NOG304440 InParanoid:Q9LHL3 OMA:FVPRSHT
PhylomeDB:Q9LHL3 ProtClustDB:CLSN2684555 Genevestigator:Q9LHL3
Uniprot:Q9LHL3
Length = 455
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 22 EYYFSADNLVRDIFLRKKM--DPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
EY F+ +L+ + + K + DPEG++PV+ IAS ++++LT++ + V LA++ S KL +
Sbjct: 153 EYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVV 212
Query: 80 V-DNFKVNQIIVIADTNGKQ 98
D KV + D + ++
Sbjct: 213 SEDGKKVKRTSQFTDRDREE 232
>CGD|CAL0005700 [details] [associations]
symbol:SLF1 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0005700 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AACQ01000029 EMBL:AACQ01000028 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 RefSeq:XP_719801.1
RefSeq:XP_719918.1 ProteinModelPortal:Q5ADL6 GeneID:3638500
GeneID:3638613 KEGG:cal:CaO19.14118 KEGG:cal:CaO19.6826
eggNOG:NOG317739 HOGENOM:HOG000093975 Uniprot:Q5ADL6
Length = 397
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 22 EYYFSADNLVRDIFLRKKMDP-EGFLPVTLIASFSRVRSLTTD---INRVLLAIQKSDKL 77
EYYFS +NL +D +LR + +G + ++ + SF+R+R LT + N VL +I++ L
Sbjct: 314 EYYFSTENLCKDTYLRSLFNKSDGSIQLSQLLSFNRMRMLTNNGKYTNLVLESIEEIPIL 373
Query: 78 ELV--DNFKVNQII 89
EL+ +N K N +
Sbjct: 374 ELLLDENDKNNDSV 387
>UNIPROTKB|Q5ADL6 [details] [associations]
symbol:SLF1 "Potential polysome-associated RNA binding
protein" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0005700 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AACQ01000029 EMBL:AACQ01000028 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 RefSeq:XP_719801.1
RefSeq:XP_719918.1 ProteinModelPortal:Q5ADL6 GeneID:3638500
GeneID:3638613 KEGG:cal:CaO19.14118 KEGG:cal:CaO19.6826
eggNOG:NOG317739 HOGENOM:HOG000093975 Uniprot:Q5ADL6
Length = 397
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 22 EYYFSADNLVRDIFLRKKMDP-EGFLPVTLIASFSRVRSLTTD---INRVLLAIQKSDKL 77
EYYFS +NL +D +LR + +G + ++ + SF+R+R LT + N VL +I++ L
Sbjct: 314 EYYFSTENLCKDTYLRSLFNKSDGSIQLSQLLSFNRMRMLTNNGKYTNLVLESIEEIPIL 373
Query: 78 ELV--DNFKVNQII 89
EL+ +N K N +
Sbjct: 374 ELLLDENDKNNDSV 387
>UNIPROTKB|F1SIT3 [details] [associations]
symbol:LARP6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002344 InterPro:IPR012677
PRINTS:PR00302 GO:GO:0005634 GO:GO:0005794 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR024642
Pfam:PF12901 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 CTD:55323 OMA:TSGGENE GeneTree:ENSGT00510000048191
EMBL:CU074280 EMBL:CU302364 RefSeq:XP_003121812.3
Ensembl:ENSSSCT00000005486 GeneID:100522415 KEGG:ssc:100522415
Uniprot:F1SIT3
Length = 492
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+YFS +NL +D FL K + + G++ V L+ SF +V+ LT D A++ S LEL
Sbjct: 101 EFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLEL 160
Query: 80 -VDNFKVNQ 87
D+ KV +
Sbjct: 161 NEDHRKVRR 169
>MGI|MGI:1914807 [details] [associations]
symbol:Larp6 "La ribonucleoprotein domain family, member 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR002344 InterPro:IPR012677
PRINTS:PR00302 PROSITE:PS50102 MGI:MGI:1914807 GO:GO:0005634
GO:GO:0005794 GO:GO:0006417 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
GO:GO:0030529 InterPro:IPR024642 Pfam:PF12901 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HSSP:P05455 CTD:55323
eggNOG:NOG239004 HOGENOM:HOG000010108 HOVERGEN:HBG070244
OMA:TSGGENE OrthoDB:EOG4NGGMP EMBL:AK017372 EMBL:AK020966
EMBL:AK039614 EMBL:AK042616 EMBL:AK087521 EMBL:BC090615
IPI:IPI00309063 RefSeq:NP_080511.2 UniGene:Mm.44546
ProteinModelPortal:Q8BN59 SMR:Q8BN59 STRING:Q8BN59
PhosphoSite:Q8BN59 PaxDb:Q8BN59 PRIDE:Q8BN59
Ensembl:ENSMUST00000038407 GeneID:67557 KEGG:mmu:67557
UCSC:uc009pzh.1 GeneTree:ENSGT00510000048191 InParanoid:Q8BN59
NextBio:324917 Bgee:Q8BN59 CleanEx:MM_LARP6 Genevestigator:Q8BN59
Uniprot:Q8BN59
Length = 492
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+YFS +NL +D FL K + + G++ V L+ SF +V+ LT D A++ S LEL
Sbjct: 101 EFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLEL 160
Query: 80 -VDNFKVNQ 87
D+ KV +
Sbjct: 161 NEDHRKVRR 169
>RGD|1308414 [details] [associations]
symbol:Larp6 "La ribonucleoprotein domain family, member 6"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002344
InterPro:IPR012677 PRINTS:PR00302 RGD:1308414 GO:GO:0005634
GO:GO:0005794 GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
EMBL:CH473975 InterPro:IPR024642 Pfam:PF12901 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 CTD:55323 OMA:TSGGENE
OrthoDB:EOG4NGGMP GeneTree:ENSGT00510000048191 IPI:IPI00370054
RefSeq:NP_001101624.1 UniGene:Rn.33750 Ensembl:ENSRNOT00000017147
GeneID:315731 KEGG:rno:315731 UCSC:RGD:1308414 NextBio:669749
Uniprot:D3ZCR5
Length = 492
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+YFS +NL +D FL K + + G++ V L+ SF +V+ LT D A++ S LEL
Sbjct: 101 EFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLEL 160
Query: 80 -VDNFKVNQ 87
D+ KV +
Sbjct: 161 NEDHRKVRR 169
>UNIPROTKB|Q9BRS8 [details] [associations]
symbol:LARP6 "La-related protein 6" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR002344 InterPro:IPR012677 PRINTS:PR00302
PROSITE:PS50102 GO:GO:0005634 GO:GO:0005794 GO:GO:0006417
GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR024642 Pfam:PF12901 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 EMBL:AF443828 EMBL:AF443829
EMBL:AK002058 EMBL:AL833876 EMBL:AC009269 EMBL:AC090868
EMBL:BC006082 EMBL:BC009446 EMBL:BC014018 EMBL:BC039153
IPI:IPI00377127 IPI:IPI00414661 RefSeq:NP_060827.2
RefSeq:NP_932062.1 UniGene:Hs.416755 HSSP:P05455
ProteinModelPortal:Q9BRS8 SMR:Q9BRS8 STRING:Q9BRS8
PhosphoSite:Q9BRS8 DMDM:74752287 PaxDb:Q9BRS8 PRIDE:Q9BRS8
Ensembl:ENST00000299213 Ensembl:ENST00000344870 GeneID:55323
KEGG:hsa:55323 UCSC:uc002ass.3 CTD:55323 GeneCards:GC15M071123
HGNC:HGNC:24012 HPA:HPA020338 MIM:611300 neXtProt:NX_Q9BRS8
PharmGKB:PA142671568 eggNOG:NOG239004 HOGENOM:HOG000010108
HOVERGEN:HBG070244 InParanoid:Q9BRS8 OMA:TSGGENE OrthoDB:EOG4NGGMP
ChiTaRS:LARP6 GenomeRNAi:55323 NextBio:59586 ArrayExpress:Q9BRS8
Bgee:Q9BRS8 CleanEx:HS_LARP6 Genevestigator:Q9BRS8 Uniprot:Q9BRS8
Length = 491
Score = 101 (40.6 bits), Expect = 0.00016, P = 0.00016
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+YFS +NL +D FL K + + G++ V L+ SF +V+ LT D A++ S LEL
Sbjct: 101 EFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLEL 160
Query: 80 -VDNFKVNQ 87
D+ KV +
Sbjct: 161 NEDHRKVRR 169
>MGI|MGI:2443114 [details] [associations]
symbol:Larp4 "La ribonucleoprotein domain family, member 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007010 "cytoskeleton organization" evidence=ISO]
[GO:0022604 "regulation of cell morphogenesis" evidence=ISO]
InterPro:IPR000504 PROSITE:PS50102 SMART:SM00360 MGI:MGI:2443114
GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723
GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 eggNOG:NOG327281 HOGENOM:HOG000004803
HOVERGEN:HBG055137 CTD:113251 EMBL:AK049756 EMBL:AK141743
IPI:IPI00828620 RefSeq:NP_001019697.2 UniGene:Mm.28811
UniGene:Mm.490671 ProteinModelPortal:Q8BWW4 SMR:Q8BWW4
PhosphoSite:Q8BWW4 PaxDb:Q8BWW4 PRIDE:Q8BWW4 GeneID:207214
KEGG:mmu:207214 UCSC:uc007xql.1 InParanoid:Q8BWW4 OrthoDB:EOG44MXRZ
NextBio:371897 CleanEx:MM_LARP4 Genevestigator:Q8BWW4
GermOnline:ENSMUSG00000023025 Uniprot:Q8BWW4
Length = 719
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
E+ FS +NL +D++L +MD + F+P+ +A+ ++ LTT+ + +L ++ S +++
Sbjct: 124 EFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTNTDLILEVLRSSPMVQV 181
>UNIPROTKB|D6RFF0 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HOGENOM:HOG000113284
HGNC:HGNC:24912 ChiTaRS:LARP7 EMBL:AC106864 IPI:IPI00966774
ProteinModelPortal:D6RFF0 SMR:D6RFF0 Ensembl:ENST00000505034
ArrayExpress:D6RFF0 Bgee:D6RFF0 Uniprot:D6RFF0
Length = 299
Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 43 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVEL 102
>SGD|S000002923 [details] [associations]
symbol:SLF1 "RNA binding protein that associates with
polysomes" species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA
binding" evidence=IEA;IDA] [GO:0006417 "regulation of translation"
evidence=IGI;IMP;IPI] [GO:0006878 "cellular copper ion homeostasis"
evidence=IMP;IPI] [GO:0005844 "polysome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] SGD:S000002923 GO:GO:0005737
GO:GO:0006417 GO:GO:0006878 EMBL:BK006938 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 EMBL:U33057 RefSeq:NP_010803.3
GeneID:852127 KEGG:sce:YDR515W GO:GO:0005844 KO:K09569
RefSeq:NP_010807.3 GeneID:852131 KEGG:sce:YDR519W
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 EMBL:U30375 EMBL:AY692939 PIR:S59742
ProteinModelPortal:Q12034 SMR:Q12034 DIP:DIP-2938N IntAct:Q12034
MINT:MINT-574898 STRING:Q12034 PaxDb:Q12034 EnsemblFungi:YDR515W
CYGD:YDR515w GeneTree:ENSGT00530000067375 OrthoDB:EOG46MFST
NextBio:970519 Genevestigator:Q12034 GermOnline:YDR515W
Uniprot:Q12034
Length = 447
Score = 99 (39.9 bits), Expect = 0.00022, P = 0.00022
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTT--DINRVLLAIQKSDKL 77
E+YFS +NL D FLR K +GF+P++LI F R+ +L+ D N +L +++
Sbjct: 280 EFYFSEENLKTDEFLRSKFKKANDGFIPMSLIGKFYRMVNLSLGGDPNLILASMR----- 334
Query: 78 ELVDNFKVNQI-IVIADTNGKQRS 100
E++ + + N + I + G Q++
Sbjct: 335 EVLQHKETNHLEIALGSIEGAQKN 358
>MGI|MGI:107634 [details] [associations]
symbol:Larp7 "La ribonucleoprotein domain family, member 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0035562 "negative regulation of chromatin binding"
evidence=IGI] [GO:0036093 "germ cell proliferation" evidence=IMP]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=IMP] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 MGI:MGI:107634 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 CTD:51574
HOVERGEN:HBG081891 KO:K15191 OrthoDB:EOG4TXBS0 InterPro:IPR014886
Pfam:PF08777 ChiTaRS:LARP7 EMBL:AC113952 EMBL:BC020127
EMBL:BC023165 EMBL:BC029178 EMBL:AK012726 EMBL:AK012772
EMBL:AK015041 EMBL:AK162147 IPI:IPI00340860 IPI:IPI00831552
RefSeq:NP_613059.2 UniGene:Mm.291032 ProteinModelPortal:Q05CL8
SMR:Q05CL8 IntAct:Q05CL8 STRING:Q05CL8 PhosphoSite:Q05CL8
PaxDb:Q05CL8 PRIDE:Q05CL8 DNASU:28036 Ensembl:ENSMUST00000029588
GeneID:28036 KEGG:mmu:28036 UCSC:uc008rhd.1
GeneTree:ENSGT00530000063464 InParanoid:Q05CL8 OMA:NNPPEDA
NextBio:306558 Bgee:Q05CL8 CleanEx:MM_LARP7 Genevestigator:Q05CL8
Uniprot:Q05CL8
Length = 570
Score = 99 (39.9 bits), Expect = 0.00031, P = 0.00031
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 37 DFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVEL 96
>RGD|1592474 [details] [associations]
symbol:Larp7 "La ribonucleoprotein domain family, member 7"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0035562
"negative regulation of chromatin binding" evidence=ISO]
[GO:0036093 "germ cell proliferation" evidence=ISO] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 RGD:1592474 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383 SMART:SM00715
HSSP:Q7YZ92 CTD:51574 HOVERGEN:HBG081891 KO:K15191
OrthoDB:EOG4TXBS0 InterPro:IPR014886 Pfam:PF08777 EMBL:BC083898
IPI:IPI00389960 RefSeq:NP_001037755.2 UniGene:Rn.79854
ProteinModelPortal:Q5XI01 STRING:Q5XI01 PhosphoSite:Q5XI01
PRIDE:Q5XI01 GeneID:686883 KEGG:rno:686883 NextBio:732906
ArrayExpress:Q5XI01 Genevestigator:Q5XI01 Uniprot:Q5XI01
Length = 571
Score = 99 (39.9 bits), Expect = 0.00031, P = 0.00031
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 38 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVEL 97
>UNIPROTKB|Q5XI01 [details] [associations]
symbol:Larp7 "La-related protein 7" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
RGD:1592474 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383 SMART:SM00715
HSSP:Q7YZ92 CTD:51574 HOVERGEN:HBG081891 KO:K15191
OrthoDB:EOG4TXBS0 InterPro:IPR014886 Pfam:PF08777 EMBL:BC083898
IPI:IPI00389960 RefSeq:NP_001037755.2 UniGene:Rn.79854
ProteinModelPortal:Q5XI01 STRING:Q5XI01 PhosphoSite:Q5XI01
PRIDE:Q5XI01 GeneID:686883 KEGG:rno:686883 NextBio:732906
ArrayExpress:Q5XI01 Genevestigator:Q5XI01 Uniprot:Q5XI01
Length = 571
Score = 99 (39.9 bits), Expect = 0.00031, P = 0.00031
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 38 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVEL 97
>UNIPROTKB|F1NYE7 [details] [associations]
symbol:SSB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:ENAEMKS
EMBL:AADN02020271 IPI:IPI00680677 Ensembl:ENSGALT00000033213
ArrayExpress:F1NYE7 Uniprot:F1NYE7
Length = 404
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 22 EYYFSADNLVRDIFLRK--KMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKS 74
EYYF NL RD FL++ K+D +G++P+ ++ F+R+ L+ D ++ A++KS
Sbjct: 22 EYYFGNHNLPRDKFLKEQIKLD-DGWVPLEVMIKFNRLSRLSKDFGVIVEALRKS 75
>UNIPROTKB|E2QW27 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA
EMBL:AAEX03016829 ProteinModelPortal:E2QW27
Ensembl:ENSCAFT00000018607 Uniprot:E2QW27
Length = 582
Score = 99 (39.9 bits), Expect = 0.00032, P = 0.00032
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 42 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVEL 101
>POMBASE|SPAC57A10.10c [details] [associations]
symbol:sla1 "La protein homolog" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006386 "termination of RNA
polymerase III transcription" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0034307 "regulation
of ascospore formation" evidence=IMP] [GO:0034414 "tRNA 3'-trailer
cleavage, endonucleolytic" evidence=IMP] [GO:0042779 "tRNA
3'-trailer cleavage" evidence=IGI] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 PomBase:SPAC57A10.10c GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0030529 GO:GO:0031137 InterPro:IPR006630
PROSITE:PS50961 EMBL:AF022949 EMBL:AB011371 PIR:T38937 PIR:T43542
RefSeq:NP_593315.1 ProteinModelPortal:P87058 STRING:P87058
PRIDE:P87058 EnsemblFungi:SPAC57A10.10c.1 GeneID:2541530
KEGG:spo:SPAC57A10.10c eggNOG:COG5193 HOGENOM:HOG000113277
KO:K11090 OMA:FFEENAG OrthoDB:EOG43JGF6 NextBio:20802627
GO:GO:0034307 GO:GO:0006386 GO:GO:0034414 Pfam:PF05383
SMART:SM00715 Uniprot:P87058
Length = 298
Score = 95 (38.5 bits), Expect = 0.00032, P = 0.00032
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 22 EYYFSADNLVRDIFL-RKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELV 80
E+YFS NL D FL +G++P+ IA+F R+R + ++ A++KS +L V
Sbjct: 72 EFYFSDTNLPHDKFLWTTSQKNDGWVPIQTIANFKRMRRFQP-LEAIVNALRKSPELLEV 130
Query: 81 DNF--KVNQIIVIADTNGK---QRSDY 102
D KV ++I + + K +RS Y
Sbjct: 131 DEAGEKVRRMIPLVRVDNKSVMERSVY 157
>UNIPROTKB|E1BQG3 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA
EMBL:AADN02009328 IPI:IPI00680045 Ensembl:ENSGALT00000019679
ArrayExpress:E1BQG3 Uniprot:E1BQG3
Length = 602
Score = 99 (39.9 bits), Expect = 0.00033, P = 0.00033
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 45 DFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVEL 104
>RGD|1310713 [details] [associations]
symbol:Larp4b "La ribonucleoprotein domain family, member 4B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0042788
"polysomal ribosome" evidence=ISO] [GO:0045727 "positive regulation
of translation" evidence=ISO] InterPro:IPR000504 SMART:SM00360
RGD:1310713 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
IPI:IPI00778075 Ensembl:ENSRNOT00000021346 UCSC:RGD:1310713
ArrayExpress:D4ABE0 Uniprot:D4ABE0
Length = 656
Score = 99 (39.9 bits), Expect = 0.00037, P = 0.00037
Identities = 18/60 (30%), Positives = 39/60 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E+ S +NL D++L +MD + ++P+T +A+ ++ L+TD++ +++ + +S L VD
Sbjct: 167 EFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVD-LIVEVLRSLPLVQVD 225
>UNIPROTKB|I3LNK9 [details] [associations]
symbol:I3LNK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464
Ensembl:ENSSSCT00000031777 OMA:NASEECE Uniprot:I3LNK9
Length = 580
Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 43 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARALKSSAVVEL 102
>UNIPROTKB|F1S150 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA EMBL:FP236150
Ensembl:ENSSSCT00000009986 Uniprot:F1S150
Length = 582
Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 43 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARALKSSAVVEL 102
>UNIPROTKB|Q92615 [details] [associations]
symbol:LARP4B "La-related protein 4B" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0042788 "polysomal ribosome" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IMP]
InterPro:IPR000504 PROSITE:PS50102 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 EMBL:CH471072 EMBL:AL157709
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
EMBL:D86971 EMBL:AK292946 EMBL:AL359878 EMBL:BC131630 EMBL:BC152443
EMBL:CR749653 IPI:IPI00953461 RefSeq:NP_055970.1 UniGene:Hs.631814
PDB:3PTH PDBsum:3PTH ProteinModelPortal:Q92615 SMR:Q92615
IntAct:Q92615 STRING:Q92615 PhosphoSite:Q92615 DMDM:134034150
PaxDb:Q92615 PRIDE:Q92615 Ensembl:ENST00000316157
Ensembl:ENST00000412411 GeneID:23185 KEGG:hsa:23185 UCSC:uc001ifs.1
CTD:23185 GeneCards:GC10M000851 HGNC:HGNC:28987 HPA:HPA036566
neXtProt:NX_Q92615 PharmGKB:PA165548762 eggNOG:NOG327281
HOGENOM:HOG000004803 HOVERGEN:HBG055137 OMA:LITPQTW
OrthoDB:EOG4FN4HK ChiTaRS:LARP4B GenomeRNAi:23185 NextBio:44651
ArrayExpress:Q92615 Bgee:Q92615 CleanEx:HS_LARP5
Genevestigator:Q92615 Uniprot:Q92615
Length = 738
Score = 99 (39.9 bits), Expect = 0.00043, P = 0.00043
Identities = 18/60 (30%), Positives = 39/60 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E+ S +NL D++L +MD + ++P+T +A+ ++ L+TD++ +++ + +S L VD
Sbjct: 165 EFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVD-LIVEVLRSLPLVQVD 223
>MGI|MGI:106330 [details] [associations]
symbol:Larp4b "La ribonucleoprotein domain family, member 4B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0010494 "cytoplasmic stress granule"
evidence=ISO] [GO:0042788 "polysomal ribosome" evidence=ISO]
[GO:0045727 "positive regulation of translation" evidence=ISO]
InterPro:IPR000504 PROSITE:PS50102 SMART:SM00360 MGI:MGI:106330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
HSSP:Q71RC2 CTD:23185 eggNOG:NOG327281 HOGENOM:HOG000004803
OMA:LITPQTW OrthoDB:EOG4FN4HK ChiTaRS:LARP4B EMBL:AK172916
EMBL:AK042491 EMBL:AK080953 EMBL:AK160759 EMBL:BC078640
IPI:IPI00469235 IPI:IPI00620564 IPI:IPI00831428 RefSeq:NP_766173.1
UniGene:Mm.234944 UniGene:Mm.392515 ProteinModelPortal:Q6A0A2
SMR:Q6A0A2 PhosphoSite:Q6A0A2 PaxDb:Q6A0A2 PRIDE:Q6A0A2
Ensembl:ENSMUST00000091829 GeneID:217980 KEGG:mmu:217980
UCSC:uc007pkr.1 UCSC:uc007pks.1 UCSC:uc011ywb.1
GeneTree:ENSGT00530000063417 InParanoid:Q6A0A2 NextBio:376122
Bgee:Q6A0A2 CleanEx:MM_LARP5 Genevestigator:Q6A0A2 Uniprot:Q6A0A2
Length = 741
Score = 99 (39.9 bits), Expect = 0.00043, P = 0.00043
Identities = 18/60 (30%), Positives = 39/60 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E+ S +NL D++L +MD + ++P+T +A+ ++ L+TD++ +++ + +S L VD
Sbjct: 167 EFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVD-LIVEVLRSLPLVQVD 225
>UNIPROTKB|F1MR14 [details] [associations]
symbol:F1MR14 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA
EMBL:DAAA02016483 EMBL:DAAA02016480 EMBL:DAAA02016481
EMBL:DAAA02016482 IPI:IPI00691372 Ensembl:ENSBTAT00000012693
ArrayExpress:F1MR14 Uniprot:F1MR14
Length = 578
Score = 97 (39.2 bits), Expect = 0.00052, P = 0.00052
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 41 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVEL 100
>UNIPROTKB|Q4G0J3 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 EMBL:CH471057
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 HSSP:P05455 CTD:51574 HOGENOM:HOG000113284
HOVERGEN:HBG081891 KO:K15191 OrthoDB:EOG4TXBS0 InterPro:IPR014886
Pfam:PF08777 EMBL:EU667388 EMBL:AF068284 EMBL:BC066945
EMBL:BC107709 EMBL:AL049996 IPI:IPI00294742 IPI:IPI00395536
PIR:T08692 RefSeq:NP_001253968.1 RefSeq:NP_056269.1
RefSeq:NP_057732.2 UniGene:Hs.713663 ProteinModelPortal:Q4G0J3
SMR:Q4G0J3 DIP:DIP-47624N IntAct:Q4G0J3 MINT:MINT-4540675
STRING:Q4G0J3 PhosphoSite:Q4G0J3 DMDM:121945944 PaxDb:Q4G0J3
PRIDE:Q4G0J3 Ensembl:ENST00000324052 Ensembl:ENST00000344442
Ensembl:ENST00000509061 GeneID:51574 KEGG:hsa:51574 UCSC:uc003iay.3
GeneCards:GC04P113559 HGNC:HGNC:24912 HPA:HPA026842 HPA:HPA027930
MIM:612026 neXtProt:NX_Q4G0J3 PharmGKB:PA145148525
InParanoid:Q4G0J3 ChiTaRS:LARP7 GenomeRNAi:51574 NextBio:55403
ArrayExpress:Q4G0J3 Bgee:Q4G0J3 CleanEx:HS_LARP7
Genevestigator:Q4G0J3 Uniprot:Q4G0J3
Length = 582
Score = 97 (39.2 bits), Expect = 0.00052, P = 0.00052
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 22 EYYFSADNLVRDIFLRKKMDP--EGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLEL 79
+++F NL +D FLR++++ +G++ ++L+ SF++++ LTTD + A++ S +EL
Sbjct: 43 DFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVEL 102
>UNIPROTKB|F1RX46 [details] [associations]
symbol:LARP4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 CTD:23185 OMA:LITPQTW
GeneTree:ENSGT00530000063417 EMBL:FP236728 EMBL:FP340182
RefSeq:XP_003130895.2 Ensembl:ENSSSCT00000012224 GeneID:100522458
KEGG:ssc:100522458 Uniprot:F1RX46
Length = 728
Score = 97 (39.2 bits), Expect = 0.00069, P = 0.00069
Identities = 18/60 (30%), Positives = 39/60 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E+ S +NL D++L +MD + ++P+T +A+ ++ L+TD++ +++ + +S L VD
Sbjct: 162 EFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDMD-LIVEVLRSLPLVQVD 220
>UNIPROTKB|F1MHX7 [details] [associations]
symbol:LARP4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 OMA:LITPQTW GeneTree:ENSGT00530000063417
EMBL:DAAA02036020 IPI:IPI00688568 UniGene:Bt.45835
Ensembl:ENSBTAT00000018457 NextBio:20867284 Uniprot:F1MHX7
Length = 730
Score = 97 (39.2 bits), Expect = 0.00070, P = 0.00070
Identities = 18/60 (30%), Positives = 39/60 (65%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E+ S +NL D++L +MD + ++P+T +A+ ++ L+TD++ +++ + +S L VD
Sbjct: 162 EFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDMD-LIVEVLRSLPLVQVD 220
>ZFIN|ZDB-GENE-061027-39 [details] [associations]
symbol:larp4b "La ribonucleoprotein domain family,
member 4B" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-061027-39 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 CTD:23185 eggNOG:NOG327281 HOGENOM:HOG000004803
HOVERGEN:HBG055137 OrthoDB:EOG4FN4HK GeneTree:ENSGT00530000063417
EMBL:CR376848 EMBL:BC124489 EMBL:BC134834 IPI:IPI00805097
RefSeq:NP_001071030.1 UniGene:Dr.83457 SMR:Q05AJ1
Ensembl:ENSDART00000089506 GeneID:563742 KEGG:dre:563742
InParanoid:Q05AJ1 OMA:WEETAGH NextBio:20885045 Uniprot:Q05AJ1
Length = 723
Score = 96 (38.9 bits), Expect = 0.00088, P = 0.00088
Identities = 19/60 (31%), Positives = 38/60 (63%)
Query: 22 EYYFSADNLVRDIFLRKKMDPEGFLPVTLIASFSRVRSLTTDINRVLLAIQKSDKLELVD 81
E+ S +NL D++L +MD + ++P+ +A+ +++ LTTD++ ++ I K+ L VD
Sbjct: 153 EFCLSRENLANDMYLISQMDSDQYVPIVTLANLDQIKKLTTDVD-LISDILKTLPLVQVD 211
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 151 128 0.00091 102 3 11 22 0.48 30
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 84
No. of states in DFA: 483 (51 KB)
Total size of DFA: 96 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 12.14u 0.08s 12.22t Elapsed: 00:00:04
Total cpu time: 12.15u 0.08s 12.23t Elapsed: 00:00:07
Start: Thu Aug 15 12:09:31 2013 End: Thu Aug 15 12:09:38 2013