RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7253
         (119 letters)



>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 33.1 bits (74), Expect = 0.004
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 26  SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETS----ASGH 81
            +   +    P V    D L+  P F  G MEN  L     T +  D+  ++       H
Sbjct: 32  MLKIAEDLGGPYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKSLSNVIAHQISH 91

Query: 82  NWVAVVVAH 90
           +W   +V +
Sbjct: 92  SWTGNLVTN 100


>d1fi4a2 d.58.26.2 (A:191-393) Mevalonate 5-diphosphate
          decarboxylase {Baker's yeast (Saccharomyces cerevisiae)
          [TaxId: 4932]}
          Length = 203

 Score = 23.2 bits (50), Expect = 8.6
 Identities = 6/50 (12%), Positives = 10/50 (20%), Gaps = 6/50 (12%)

Query: 16 SVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAI------PDFGTGAMENW 59
          S  G    V +           V    + +           F    M + 
Sbjct: 18 STQGMQLTVATSELFKERIEHVVPKRFEVMRKAIVEKDFATFAKETMMDS 67


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 448,744
Number of extensions: 18340
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 2
Length of query: 119
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 45
Effective length of database: 1,391,576
Effective search space: 62620920
Effective search space used: 62620920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)