Query psy7254
Match_columns 567
No_of_seqs 257 out of 1776
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 21:59:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7254hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 3E-108 1E-112 942.5 39.0 531 1-566 222-840 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 4E-105 2E-109 916.8 42.8 528 1-566 160-772 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 9E-105 3E-109 916.4 38.5 536 1-566 169-780 (909)
4 1z5h_A Tricorn protease intera 100.0 3.7E-95 1.3E-99 823.4 31.6 496 1-566 123-671 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 4.5E-68 1.5E-72 604.6 28.7 519 1-565 139-762 (867)
6 3b34_A Aminopeptidase N; prote 100.0 4.6E-58 1.6E-62 521.0 35.2 506 1-555 164-777 (891)
7 3ebh_A PFA-M1, M1 family amino 100.0 1.5E-57 5.2E-62 513.7 33.1 506 1-553 146-773 (889)
8 3rjo_A Endoplasmic reticulum a 100.0 1.8E-57 6E-62 482.3 27.1 279 281-566 1-289 (419)
9 3cia_A Cold-active aminopeptid 100.0 1.5E-50 5.2E-55 446.9 8.5 336 1-435 168-558 (605)
10 3u9w_A Leukotriene A-4 hydrola 100.0 2.2E-48 7.6E-53 429.9 5.1 319 1-414 156-538 (608)
11 2xq0_A LTA-4 hydrolase, leukot 100.0 3.1E-47 1E-51 421.9 5.7 340 1-434 169-585 (632)
12 4fgm_A Aminopeptidase N family 99.8 2.8E-20 9.7E-25 203.3 10.9 248 1-283 125-450 (597)
13 3cqb_A Probable protease HTPX 83.2 0.87 3E-05 37.3 3.6 66 85-159 27-95 (107)
14 3zuk_A Endopeptidase, peptidas 67.4 2.9 9.9E-05 46.2 3.3 38 133-170 509-554 (699)
15 1r1h_A Neprilysin; enkephalina 63.5 3.8 0.00013 45.3 3.3 38 133-170 510-555 (696)
16 3dwb_A ECE-1, endothelin-conve 60.5 4.6 0.00016 44.4 3.3 38 133-170 487-532 (670)
17 1r55_A ADAM 33; metalloproteas 56.3 10 0.00036 34.9 4.5 17 146-165 135-151 (214)
18 1yp1_A FII; FII hydrolase; 1.9 54.6 16 0.00056 33.2 5.5 17 146-165 134-150 (202)
19 3c37_A Peptidase, M48 family; 54.5 8.9 0.00031 36.4 3.8 16 144-159 97-112 (253)
20 2ejq_A Hypothetical protein TT 52.8 2.9 9.9E-05 35.5 0.0 37 124-165 68-104 (130)
21 2w15_A Zinc metalloproteinase 51.7 22 0.00074 32.3 5.9 17 146-165 135-151 (202)
22 1bud_A Protein (acutolysin A); 50.4 21 0.00072 32.2 5.5 17 146-165 132-148 (197)
23 2ero_A VAP-1, vascular apoptos 47.3 26 0.00087 36.1 6.2 18 145-165 144-161 (427)
24 1u4g_A Elastase, pseudolysin; 45.6 25 0.00085 34.2 5.4 93 79-192 73-172 (301)
25 1atl_A Atrolysin C; metalloend 43.9 18 0.00062 32.9 3.9 17 146-165 135-151 (202)
26 1qua_A Acutolysin-C, hemorrhag 43.5 18 0.00062 32.7 3.9 14 146-159 134-147 (197)
27 1kuf_A Atrolysin E, metallopro 40.3 20 0.00069 32.6 3.7 17 146-165 137-153 (203)
28 2e3x_A Coagulation factor X-ac 38.6 20 0.00069 36.9 3.7 18 145-165 137-154 (427)
29 2y3u_A Collagenase, collagenas 36.6 22 0.00075 39.4 3.7 36 147-193 422-469 (785)
30 2dw0_A Catrocollastatin; apopt 34.5 26 0.00091 35.9 3.8 18 145-165 135-152 (419)
31 3k7n_A K-like; SVMP, hydrolase 33.8 57 0.0019 33.1 6.1 18 145-165 137-154 (397)
32 3k7l_A Atragin; SVMP, metallop 33.0 45 0.0015 34.1 5.3 18 145-165 142-159 (422)
33 3nqx_A MCP-02, secreted metall 31.8 65 0.0022 31.3 5.8 71 79-159 74-147 (306)
34 3e11_A Predicted zincin-like m 31.8 21 0.00071 29.4 2.0 36 122-159 67-102 (114)
35 3dnz_A Thermolysin; hydrolase, 29.4 96 0.0033 30.2 6.6 75 77-159 68-148 (316)
36 4ger_A Gentlyase metalloprotea 28.9 83 0.0028 30.5 6.0 74 77-159 61-141 (304)
37 2rjq_A Adamts-5; metalloprotea 27.8 57 0.002 32.7 5.0 16 147-165 143-158 (378)
38 3b8z_A Protein adamts-5; alpha 27.6 23 0.00078 32.5 1.8 16 147-165 141-156 (217)
39 2qk1_A Protein STU2; STU2P, XM 27.4 3.3E+02 0.011 25.0 10.1 98 384-487 29-135 (249)
40 2v4b_A Adamts-1; zymogen, prot 26.6 43 0.0015 32.4 3.6 16 147-165 143-158 (300)
41 1bqb_A Protein (aureolysin); h 26.5 1.1E+02 0.0038 29.6 6.5 25 79-104 67-91 (301)
42 4dd8_A Disintegrin and metallo 26.3 80 0.0027 28.6 5.3 17 146-165 132-148 (208)
43 2ddf_A ADAM 17; hydrolase; HET 25.9 26 0.00091 33.0 1.9 16 147-165 182-197 (257)
44 3g5c_A ADAM 22; alpha/beta fol 25.3 72 0.0025 33.5 5.2 15 145-159 132-146 (510)
45 3ltj_A Alpharep-4; protein eng 24.0 3.4E+02 0.012 23.3 9.5 61 359-429 6-66 (201)
46 2rjp_A Adamts-4; metalloprotea 21.0 35 0.0012 33.3 1.8 17 146-165 142-158 (316)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=3.3e-108 Score=942.51 Aligned_cols=531 Identities=31% Similarity=0.527 Sum_probs=477.9
Q ss_pred CEEEEcCCCeEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeecccCCeeEEEEeCCCCchhHH
Q psy7254 1 MSIFRDRFHISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDVTAKGVSVSVYAPPDLLPQAK 80 (567)
Q Consensus 1 i~i~~p~~~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~~~~i~v~~~p~~~~~~~ 80 (567)
|+|++|++|+|+||||+.++. ..++|+++++|++|||||||++||+||+|+.++..+.+|+++++|++|+...+++
T Consensus 222 itI~~p~~~~alSN~~~~~~~----~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~ 297 (967)
T 3se6_A 222 IKIRRESRHIALSNMPKVKTI----ELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH 297 (967)
T ss_dssp EEEEECTTCEEEESSCEEEEE----ECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGH
T ss_pred EEEEECCCcEEEeCCCcccce----ecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHH
Confidence 589999999999999997765 5678999999999999999999999999999887656899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHhhhccc
Q psy7254 81 FALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQVS 160 (567)
Q Consensus 81 ~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW~ 160 (567)
++++.+++++++||++||+|||++|+|+|++|+|..|||||||||+|+|+.+++++..++...++.++.+||||+||||
T Consensus 298 ~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqW- 376 (967)
T 3se6_A 298 YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQW- 376 (967)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGT-
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999998888888999999999999999
Q ss_pred ccCCc---cccccccccccCccccCchhhhhhhHhhhhhhccc-----------------------------------ch
Q psy7254 161 VVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQS-----------------------------------QN 202 (567)
Q Consensus 161 ~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~p-----------------------------------~~ 202 (567)
|||+ +||+| +|| |||| |+|++++++++.+| ++
T Consensus 377 -FGnlVT~~wW~d-lWL-------nEGF-Aty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i 446 (967)
T 3se6_A 377 -FGNLVTMEWWND-IWL-------NEGF-AKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQI 446 (967)
T ss_dssp -BTTTEEESSGGG-THH-------HHHH-HHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHH
T ss_pred -hcCccccCCCcc-ccH-------HHHH-HHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHH
Confidence 9999 99999 999 9999 99999988776543 34
Q ss_pred hhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhc--------
Q psy7254 203 GIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGA-------- 268 (567)
Q Consensus 203 ~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~-------- 268 (567)
...|+.++|.||+++ ||+.++ |+ +.|+++|+.|+++|++ +++++.|| +++
T Consensus 447 ~~~Fd~i~Y~KGa~vL~mL~~~l--G~------e~F~~gLr~Yl~~~~~--------~nat~~Dl~~~l~~~~~~~~~~~ 510 (967)
T 3se6_A 447 QEMFDEVSYNKGACILNMLKDFL--GE------EKFQKGIIQYLKKFSY--------RNAKNDDLWSSLSNSCLESDFTS 510 (967)
T ss_dssp HHTSSHHHHHHHHHHHHHHHHHH--CH------HHHHHHHHHHHHHHTT--------EEECHHHHHHHHHCC--------
T ss_pred HHhcchhhhhHHHHHHHHHHHHh--HH------HHHHHHHHHHHHHhcc--------CCCCHHHHHHHHHHHhhhccccc
Confidence 557999999999999 999999 99 8899999999999999 99999999 332
Q ss_pred -------------------cc----ccccccccCCCcceEEEec---ceEEeeceeeecCCCCCc---cCCCCcEEE--E
Q psy7254 269 -------------------KR----PVIPIATSGEVFPWNNVRL---PTFAHPLRYVINIHPNLT---TLDVKVVYH--F 317 (567)
Q Consensus 269 -------------------~~----~~~~~W~~q~G~P~v~v~~---~~~i~Q~rf~~~~~~~~~---~~~~~~~W~--i 317 (567)
++ ++|++|+.|+|||+|+|++ .+.|+|+||+.+.....+ +++.++.|+ |
T Consensus 511 ~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl 590 (967)
T 3se6_A 511 GGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPL 590 (967)
T ss_dssp -----------------CCCCCCHHHHHHHHHHSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCE
T ss_pred cccccccccccccccccccCCcCHHHHHHHHhcCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEE
Confidence 23 8999999999999999987 688999999975432110 112457899 6
Q ss_pred EEEEccCCcccceEEEecCceeEEeCCCCCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHH
Q psy7254 318 KKIRNLGGYKEQEIVWMNMTDVTFKLPNSIKWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFT 397 (567)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~ 397 (567)
+|.+++++ ....+|++.++.++.++.+++||++|.++.|||||+||+++|++|+++|+.|++.||+.||||||||+|+
T Consensus 591 ~~~~~~~~--~~~~~~l~~~~~~i~~~~~~~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~ 668 (967)
T 3se6_A 591 TYSTSSSN--VIHRHILKSKTDTLDLPEKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQ 668 (967)
T ss_dssp EEEESSCC--CCEEECCCSSEEEEECSSCCSCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHH
T ss_pred EEEeCCCC--ccceEEecCCceEEeccCCCceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 67766543 2356788887778888877899999999999999999999999999999988889999999999999999
Q ss_pred HHHcCCcchhhhhHhhhhhhcCCCchhHHHHHHHHHHHHhhccC---CchhHHHHHHHHHHHHHHHhhcccccCCchHHH
Q psy7254 398 LSRAGLVNATVPLELSTYLLKEKDYVPWATALEHFQHWSTSLSE---ASPYRLFEQYVKKLLTPISHHIGWEDTGSHLEK 474 (567)
Q Consensus 398 la~ag~l~~~~~l~l~~yL~~E~~y~~W~~a~~~l~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~lg~~~~~s~~~~ 474 (567)
||++|.++|+.+|++++||++|++|+||.++++.|..+...+.+ .+.++.|++|++++++|+|+++||++++++.++
T Consensus 669 la~~g~~~~~~~l~l~~~l~~E~~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~ 748 (967)
T 3se6_A 669 LVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWSDKGSVWDR 748 (967)
T ss_dssp HHHTTSSCHHHHHHHTTGGGTCCCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSSCCSCHHHH
T ss_pred HHHcCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCCCCCcHHHH
Confidence 99999999999999999999999999999999766665544331 346789999999999999999999988999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC--CCCcchhhhheeheeecCCHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy7254 475 LMRSDILAAAVLVGVDTVVKESKSKFNGWMEKGF--RIPPNLREVVYYAGIKYGGVKEWQNCWAKYNSTRVPSERKLLLK 552 (567)
Q Consensus 475 ~lR~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~--~ip~dlr~~Vyc~gi~~g~~~~w~~l~~~y~~~~~~~ek~~ll~ 552 (567)
++|..++.+||.+|+++|+++|+++|++|++++. .||||+|.+|||+|+++ +++|+++|++|++++++.||..||.
T Consensus 749 ~lR~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~~--~~~~~~l~~~y~~s~~~~ek~~ll~ 826 (967)
T 3se6_A 749 MLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVYSVGAQT--TAGWNYLLEQYELSMSSAEQNKILY 826 (967)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSCCCHHHHHHHHHHHTTS--HHHHHHHHHHHHHCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccCChhhhhHhHhhhhcc--HHHHHHHHHHHhccCCHHHHHHHHH
Confidence 9999999999999999999999999999998754 59999999999999974 9999999999999999999999999
Q ss_pred HhCCCCChhHHhhc
Q psy7254 553 VLGASRDPWILQRF 566 (567)
Q Consensus 553 aL~ct~d~~ll~r~ 566 (567)
||||++|+++|+||
T Consensus 827 aL~ct~d~~ll~~~ 840 (967)
T 3se6_A 827 ALSTSKHQEKLLKL 840 (967)
T ss_dssp HHTTCCCHHHHHHH
T ss_pred HhcCCCCHHHHHHH
Confidence 99999999999986
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=4.4e-105 Score=916.84 Aligned_cols=528 Identities=31% Similarity=0.525 Sum_probs=475.6
Q ss_pred CEEEEcCCCeEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeecccCCeeEEEEeCCCCchhHH
Q psy7254 1 MSIFRDRFHISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDVTAKGVSVSVYAPPDLLPQAK 80 (567)
Q Consensus 1 i~i~~p~~~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~~~~i~v~~~p~~~~~~~ 80 (567)
|+|++|++|+|+|||++.++. ..++|+++++|+.|||||||++||+||+|+.++..+.+|+++++|++|+...+++
T Consensus 160 itI~~p~~~~alSN~~~~~~~----~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~ 235 (897)
T 2xdt_A 160 IKIRREPRHLAISNMPLVKSV----TVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQAD 235 (897)
T ss_dssp EEEEECTTCEEEESSCEEEEE----EEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCH
T ss_pred EEEEEcCCceEecCCCccceE----ecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHH
Confidence 589999999999999998764 4567899999999999999999999999999887556899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHhhhccc
Q psy7254 81 FALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQVS 160 (567)
Q Consensus 81 ~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW~ 160 (567)
++++.+++++++|+++||+|||++|+|+|++|+|..||||||||++|+|+.+++++..++...++.++.+||||+||||
T Consensus 236 ~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqW- 314 (897)
T 2xdt_A 236 YALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQW- 314 (897)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTT-
T ss_pred HHHHHHHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999998888888999999999999999
Q ss_pred ccCCc---cccccccccccCccccCchhhhhhhHhhhhhhccc-----------------------------------ch
Q psy7254 161 VVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQS-----------------------------------QN 202 (567)
Q Consensus 161 ~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~p-----------------------------------~~ 202 (567)
|||+ +||+| +|| |||| |+|++++++++.+| ++
T Consensus 315 -FGnlVT~~~W~d-lWL-------nEGf-Aty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i 384 (897)
T 2xdt_A 315 -FGNLVTMEWWND-LWL-------NEGF-AKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQI 384 (897)
T ss_dssp -BTTTEEESSGGG-THH-------HHHH-HHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHH
T ss_pred -cCCEeccCCcch-hhh-------hHHH-HHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHH
Confidence 9999 99999 999 9999 99999887765532 34
Q ss_pred hhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhc--------
Q psy7254 203 GIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGA-------- 268 (567)
Q Consensus 203 ~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~-------- 268 (567)
...|+.++|.||++| ||+.++ |+ +.|+++|+.|+++|++ ++++++|| +++
T Consensus 385 ~~~fd~i~Y~KGa~vl~mL~~~l--G~------e~F~~gl~~Yl~~~~~--------~~a~~~Dl~~~l~~~~~~~~~~~ 448 (897)
T 2xdt_A 385 REMFDDVSYDKGACILNMLREYL--SA------DAFKSGIVQYLQKHSY--------KNTKNEDLWDSMASICPTDGVKG 448 (897)
T ss_dssp HHTSSHHHHHHHHHHHHHHHHHS--CH------HHHHHHHHHHHHHHTT--------EEECHHHHHHHHHTC--------
T ss_pred HHhcchhhhhhHHHHHHHHHHHh--CH------HHHHHHHHHHHHHhcc--------CCCCHHHHHHHHHHHhhhccccc
Confidence 467899999999999 999999 99 8899999999999999 99999999 332
Q ss_pred -----------c--------c----ccccccccCCCcceEEEec---ceEEeeceeeecCCCCCccCCCCcEEE--EEEE
Q psy7254 269 -----------K--------R----PVIPIATSGEVFPWNNVRL---PTFAHPLRYVINIHPNLTTLDVKVVYH--FKKI 320 (567)
Q Consensus 269 -----------~--------~----~~~~~W~~q~G~P~v~v~~---~~~i~Q~rf~~~~~~~~~~~~~~~~W~--i~~~ 320 (567)
+ + ++|++|+.|+|||+++|++ .+.|+|+||..+..+. + +.++.|+ |+|.
T Consensus 449 ~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~~q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~--~-~~~~~w~iPi~~~ 525 (897)
T 2xdt_A 449 MDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWTLQKGFPLITITVRGRNVHMKQEHYMKGSDGA--P-DTGYLWHVPLTFI 525 (897)
T ss_dssp --------------------CCCHHHHHHHHHSSCSEEEEEEEEETTEEEEEEEEECCC--------CCCCCCCEEEEEE
T ss_pred cccccccccccccccccccCCCCHHHHHHHhhcCCCceEEEEEEcCCEEEEEEEEeecCCCCC--C-CCCceEEEEEEEE
Confidence 3 3 7899999999999999987 5899999998754321 1 2356788 5565
Q ss_pred EccCCcccceEEEecCceeEEeCCCCCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHH
Q psy7254 321 RNLGGYKEQEIVWMNMTDVTFKLPNSIKWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSR 400 (567)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~ 400 (567)
+++++. ....|++.++.++.++.+++||++|.++.|||||+||+++|+.|+++|+.+++.||+.+|||||+|+|+||+
T Consensus 526 ~~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ 603 (897)
T 2xdt_A 526 TSKSDM--VHRFLLKTKTDVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVS 603 (897)
T ss_dssp ESSCSS--CEEEEECSSEEEEECSSCCSCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHT
T ss_pred eCCCCc--cceEEecCCceEEEccCCCceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHH
Confidence 554432 356788887777887766789999999999999999999999999999988889999999999999999999
Q ss_pred cCCcchhhhhHhhhhhhcCCCchhHHHHHHHHHHHHhhccCCchh---HHHHHHHHHHHHHHHhhcccccCCchHHHHHH
Q psy7254 401 AGLVNATVPLELSTYLLKEKDYVPWATALEHFQHWSTSLSEASPY---RLFEQYVKKLLTPISHHIGWEDTGSHLEKLMR 477 (567)
Q Consensus 401 ag~l~~~~~l~l~~yL~~E~~y~~W~~a~~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~lg~~~~~s~~~~~lR 477 (567)
+|.++|+.+|+|++||++|++|+||.++++.|..+...+.+.+.+ ..|++|+++|++|+|++|||+++++++++++|
T Consensus 604 ~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~lr 683 (897)
T 2xdt_A 604 IGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTDEGSVSERMLR 683 (897)
T ss_dssp TTSSCHHHHHHHHGGGGGCCCHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTCCSSCCSCHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 999999999999999999999999999996666555444446667 89999999999999999999998899999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhhhhccC--CCCCcchhhhheeheeecCCHHHHHHHHHHHhcCCCHHHHHHHHHHhC
Q psy7254 478 SDILAAAVLVGVDTVVKESKSKFNGWMEKG--FRIPPNLREVVYYAGIKYGGVKEWQNCWAKYNSTRVPSERKLLLKVLG 555 (567)
Q Consensus 478 ~~il~~ac~~g~~~c~~~A~~~f~~~~~~~--~~ip~dlr~~Vyc~gi~~g~~~~w~~l~~~y~~~~~~~ek~~ll~aL~ 555 (567)
..++.+||.+|+++|+++|+++|++|++++ +.||||+|++|||+|+ |++++|+++|++|++++++.||..||.|||
T Consensus 684 ~~~~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~~lr~~vy~~~~--g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ 761 (897)
T 2xdt_A 684 SQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVFAVGA--QSTEGWDFLYSKYQFSLSSTEKSQIEFALC 761 (897)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSCCCHHHHHHHHHHHT--TSHHHHHHHHHHHTTCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCcCCCCcchhhhEEEEec--CCHHHHHHHHHHHHccCCHHHHHHHHHHhc
Confidence 999999999999999999999999999874 4899999999999998 999999999999999999999999999999
Q ss_pred CCCChhHHhhc
Q psy7254 556 ASRDPWILQRF 566 (567)
Q Consensus 556 ct~d~~ll~r~ 566 (567)
|++|+++|+||
T Consensus 762 c~~~~~~l~~~ 772 (897)
T 2xdt_A 762 RTQNKEKLQWL 772 (897)
T ss_dssp TCCCHHHHHHH
T ss_pred cCCCHHHHHHH
Confidence 99999999985
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=9e-105 Score=916.36 Aligned_cols=536 Identities=27% Similarity=0.479 Sum_probs=471.6
Q ss_pred CEEEEcCCCeEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeecccCCeeEEEEeCCCCch--h
Q psy7254 1 MSIFRDRFHISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDVTAKGVSVSVYAPPDLLP--Q 78 (567)
Q Consensus 1 i~i~~p~~~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~~~~i~v~~~p~~~~--~ 78 (567)
|+|++|++|+|+||||+.++... ...++|+++++|++|||||||++||+||+|..++..+.+|+++++|++|+... +
T Consensus 169 i~i~~p~~~~alSN~~~~~~~~~-~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~~~~~~ 247 (909)
T 4fke_A 169 ITLIHPNNLTALSNMPPKGSSTP-LAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGH 247 (909)
T ss_dssp EEEEEETTSEEEESSCBSSSCEE-CTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHHHHTTT
T ss_pred EEEEECCCCEEEcCCcccccccc-eecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecchhhhhh
Confidence 58999999999999999865410 02357999999999999999999999999999888777899999999999765 4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHhhhc
Q psy7254 79 AKFALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQ 158 (567)
Q Consensus 79 ~~~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHq 158 (567)
++++++.+++++++||++||+|||++|+|+|++|+|..|||||||||+|+|..+|++|..++...++.++.+||||+|||
T Consensus 248 ~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaHElAHq 327 (909)
T 4fke_A 248 GMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQ 327 (909)
T ss_dssp THHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHHHHHhh
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCc---cccccccccccCccccCchhhhhhhHhhhhhhccc-----------------------------------
Q psy7254 159 VSVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQS----------------------------------- 200 (567)
Q Consensus 159 W~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~p----------------------------------- 200 (567)
| |||+ +||+| +|| |||| |+|+++++.++.+|
T Consensus 328 W--FGnlVT~~~W~d-lWL-------nEGF-Aty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v 396 (909)
T 4fke_A 328 W--FGNLVTLAWWND-LWL-------NEGF-ASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEV 396 (909)
T ss_dssp T--BTTTEEESSGGG-HHH-------HHHH-HHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGC
T ss_pred h--hcCeecccccCc-cee-------ehHH-HHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCcccccccc
Confidence 9 9999 99999 999 9999 99999998876533
Q ss_pred ----chhhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhccc
Q psy7254 201 ----QNGIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAKR 270 (567)
Q Consensus 201 ----~~~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~~ 270 (567)
++...|+.++|.||+++ ||+.++ |+ +.|+++|+.|+++|++ ++++++|| +++++
T Consensus 397 ~~~~~i~~~fd~i~Y~KGa~vL~mL~~~l--G~------e~F~~gl~~Yl~~~~~--------~na~~~Dl~~~l~~~s~ 460 (909)
T 4fke_A 397 NTPAQISEMFDSISYSKGASVIRMLSNFL--TE------DLFKEGLASYLHAFAY--------QNTTYLDLWEHLQKAVD 460 (909)
T ss_dssp CSHHHHHTTSSHHHHHHHHHHHHHHHHHH--CH------HHHHHHHHHHHHHHTT--------EEECHHHHHHHHHHHHH
T ss_pred CChhhHHhhhhhHHHHHHHHHHHHHHHHh--HH------HHHHHHHHHHHHhhcc--------cCCCHHHHHHHHHHHhC
Confidence 45567999999999999 999999 99 8899999999999999 99999999 33322
Q ss_pred ------------ccccccccCCCcceEEEec-ceEEeeceeeecCCCCC-ccCCCCcEEEEEE--EEccCCcccceEEEe
Q psy7254 271 ------------PVIPIATSGEVFPWNNVRL-PTFAHPLRYVINIHPNL-TTLDVKVVYHFKK--IRNLGGYKEQEIVWM 334 (567)
Q Consensus 271 ------------~~~~~W~~q~G~P~v~v~~-~~~i~Q~rf~~~~~~~~-~~~~~~~~W~i~~--~~~~~~~~~~~~~~~ 334 (567)
.+|++|+.|+|||+|+|.+ ...++|+||........ .+++.++.|+||+ .+++.. ....++.
T Consensus 461 ~~~~~~~~~~v~~~~~~W~~q~G~Pvv~V~~~~~~~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~--~~~~~~~ 538 (909)
T 4fke_A 461 AQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVM--QDHYWLR 538 (909)
T ss_dssp TCSSCCCSSCHHHHHHHHHSSCSCEEEEEETTTTEEEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEE--CCCEEEC
T ss_pred cccccccchhHHhHhhCccccCCCcEEEEEeccCcEEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCc--cceEEee
Confidence 6899999999999999987 56789999987544322 2334567899664 443332 2233443
Q ss_pred cCceeEEe--CCCCCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHcCCcchhhhhHh
Q psy7254 335 NMTDVTFK--LPNSIKWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSRAGLVNATVPLEL 412 (567)
Q Consensus 335 ~~~~~~~~--l~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~ag~l~~~~~l~l 412 (567)
........ ...+++||++|.+++|||||+||+++|++|+++|+.+++.||+.||||||+|+|+||++|.++++.+|++
T Consensus 539 ~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l 618 (909)
T 4fke_A 539 DVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDN 618 (909)
T ss_dssp SCSEEECGGGCCCTTCCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHT
T ss_pred ccccceeeeccCCCCCeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 33333222 2335689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHhhcccc-----c-CCchHHHHHHHHHHHHHHh
Q psy7254 413 STYLLKEKDYVPWATALEHFQHWSTSLSEASPYRLFEQYVKKLLTPISHHIGWE-----D-TGSHLEKLMRSDILAAAVL 486 (567)
Q Consensus 413 ~~yL~~E~~y~~W~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~-----~-~~s~~~~~lR~~il~~ac~ 486 (567)
++||++|++|+||.++++.|..+...+.+.+.++.|++|+++++.|+|+++||. + +++++++++|..++.+||.
T Consensus 619 ~~~l~~E~~y~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~ 698 (909)
T 4fke_A 619 TLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACS 698 (909)
T ss_dssp TGGGGGCCSHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHccCccHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHH
Confidence 999999999999999997666655555457889999999999999999999764 2 5688999999999999999
Q ss_pred cCCHHHHHHHHHHhhhhhcc--CCCCCcchhhhheeheeecCCHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCChhHHh
Q psy7254 487 VGVDTVVKESKSKFNGWMEK--GFRIPPNLREVVYYAGIKYGGVKEWQNCWAKYNSTRVPSERKLLLKVLGASRDPWILQ 564 (567)
Q Consensus 487 ~g~~~c~~~A~~~f~~~~~~--~~~ip~dlr~~Vyc~gi~~g~~~~w~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~ 564 (567)
.|+++|+++|+++|++|+++ +++||||+|++|||+|+++|+.++|+++|++|++++++.||..+|.||||++|+++|+
T Consensus 699 ~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~ 778 (909)
T 4fke_A 699 NGLPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLN 778 (909)
T ss_dssp TTCHHHHHHHHHHHHHHHTCTTSCCSCTTTHHHHHHHHHHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHH
T ss_pred hccHHHHHHHHHHHHHHhhCCCCCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHH
Confidence 99999999999999999987 3579999999999999999999999999999999999999999999999999999999
Q ss_pred hc
Q psy7254 565 RF 566 (567)
Q Consensus 565 r~ 566 (567)
|+
T Consensus 779 ~~ 780 (909)
T 4fke_A 779 RY 780 (909)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=3.7e-95 Score=823.35 Aligned_cols=496 Identities=20% Similarity=0.290 Sum_probs=441.0
Q ss_pred CEEEEcCCCeEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeecccCCeeEEEEeCCCCchhHH
Q psy7254 1 MSIFRDRFHISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDVTAKGVSVSVYAPPDLLPQAK 80 (567)
Q Consensus 1 i~i~~p~~~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~~~~i~v~~~p~~~~~~~ 80 (567)
|+|++|++|+|+|||++.++ ..+|+++++|++|||||||++||+||+|+.++... .|+++++|++|+ .+++
T Consensus 123 iti~~p~~~~~lSN~~~~~~------~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~-~gv~~~v~~~~~--~~~~ 193 (780)
T 1z5h_A 123 ITVVIDKDYDAISNMPPKRI------EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKY-RDIDLILASLKD--IRSK 193 (780)
T ss_dssp EEEEECTTCEEEESSCEEEE------EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEE-TTEEEEEEESSC--CCCS
T ss_pred EEEEECCCCEEEeCCccccc------cCCCceEEEEecCCcccceEEEEEEeccEEEeecc-CCeeEEEEEccc--hhHH
Confidence 58999999999999998654 23678999999999999999999999999988765 499999999998 6789
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHhhhccc
Q psy7254 81 FALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQVS 160 (567)
Q Consensus 81 ~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW~ 160 (567)
++++.+++++++|+++||+|||++|+|+|++|+|..|||||||+|+|+|..++++ ..++...++.++.+||||+||||
T Consensus 194 ~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqW- 271 (780)
T 1z5h_A 194 YPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQW- 271 (780)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999 66777788889999999999999
Q ss_pred ccCCc---cccccccccccCccccCchhhhhhhHhhhhhhccc------------------------------------c
Q psy7254 161 VVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQS------------------------------------Q 201 (567)
Q Consensus 161 ~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~p------------------------------------~ 201 (567)
|||+ +||+| +|| |||| |+|++++++++.+| +
T Consensus 272 -fGnlVT~~~W~d-lWL-------nEGf-A~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~ 341 (780)
T 1z5h_A 272 -FGDLVTMKWWND-LWL-------NESF-ATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDE 341 (780)
T ss_dssp -BTTTEEESSGGG-HHH-------HHHH-HHHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCC
T ss_pred -hCCccccCCccc-ccc-------cHHH-HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHH
Confidence 9999 99999 999 9999 99999987765532 3
Q ss_pred hhhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhccc----c
Q psy7254 202 NGIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAKR----P 271 (567)
Q Consensus 202 ~~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~~----~ 271 (567)
+...|+.++|.||++| ||+..+ |+ +.|+++|+.|+++|++ ++++++|| +++++ .
T Consensus 342 ~~~~fd~i~Y~KGa~vl~mL~~~l--G~------e~F~~~l~~yl~~~~~--------~~~t~~Dl~~~l~~~sg~dl~~ 405 (780)
T 1z5h_A 342 ISQIFDEISYGKGASILRMIEDYA--GY------EEFRKGISKYLNDHKF--------GNAEGSDLWTAIEDVSGKPVKR 405 (780)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHHH--CH------HHHHHHHHHHHHHHTT--------EEECHHHHHHHHHHHHCSCHHH
T ss_pred HHHhcchhhhhhHHHHHHHHHHHh--CH------HHHHHHHHHHHHHhcc--------CCCCHHHHHHHHHHHhCCCHHH
Confidence 4456899999999999 999999 99 8899999999999999 99999999 34444 8
Q ss_pred cccccccCCCcceEEEec---ceEEeeceeeecCCCCCccCCCCcEEEEEEE-EccCCcccceEEEecCceeEEeCCCCC
Q psy7254 272 VIPIATSGEVFPWNNVRL---PTFAHPLRYVINIHPNLTTLDVKVVYHFKKI-RNLGGYKEQEIVWMNMTDVTFKLPNSI 347 (567)
Q Consensus 272 ~~~~W~~q~G~P~v~v~~---~~~i~Q~rf~~~~~~~~~~~~~~~~W~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (567)
+|++|+.|+|+|+++|++ .+.|+|+||..+. + .+..|+||+. +++ +. ... . +++++ +.++.+
T Consensus 406 ~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~------~~~~w~iPi~~~~~-~~-~~~-~-l~~~~--~~~~~~- 471 (780)
T 1z5h_A 406 VMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-E------EEGRWPVPVNIKKK-DG-VER-I-LLEDE--ASIEAD- 471 (780)
T ss_dssp HHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-C------EECCCCEEEEEEET-TE-EEE-E-EECSS--EEEECT-
T ss_pred HHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-C------CCceEEEEEEEcCC-Cc-eee-e-ccCce--EEccCC-
Confidence 999999999999999987 5889999998643 1 2346874433 322 22 222 3 55543 444444
Q ss_pred ceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHcCCcchhhhhHhhhhhhcCCCchhHHH
Q psy7254 348 KWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSRAGLVNATVPLELSTYLLKEKDYVPWAT 427 (567)
Q Consensus 348 ~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~ag~l~~~~~l~l~~yL~~E~~y~~W~~ 427 (567)
+||++|.++.|||||+||+++|..|+++| +.|++.+|+|||+|+|+||++|.++++.+|+++.||++|++|+||.+
T Consensus 472 ~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l----~~i~~~~Ra~li~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~ 547 (780)
T 1z5h_A 472 GLIKINADSAGFYRVLYDDATFSDVMGHY----RDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITA 547 (780)
T ss_dssp TEEEESGGGCSSSEEECCHHHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHH
T ss_pred ceEEEeCCCCEEEEEECCHHHHHHHHHHh----ccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHH
Confidence 89999999999999999999999999988 35999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC
Q psy7254 428 ALEHFQHWSTSLSEASPYRLFEQYVKKLLTPISHHIGWEDTGSHLEKLMRSDILAAAVLVGVDTVVKESKSKFNGWMEKG 507 (567)
Q Consensus 428 a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~s~~~~~lR~~il~~ac~~g~~~c~~~A~~~f~~~~~~~ 507 (567)
+++.|..+... + ..|++|+++|++++++++| . .+++.++++|..++.+||.+|+++|++ |+++|++|
T Consensus 548 ~~~~l~~~~~~--~----~~~~~~~~~l~~~~~~~l~-~-~~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~f~~~---- 614 (780)
T 1z5h_A 548 IVGQMEYLRML--T----HAFDDDARAFCRSRMQFLT-G-KQDENLKIALGRVSRLYVMVDESYAEE-MSKLFKDF---- 614 (780)
T ss_dssp HHHHHHHHHTT--C----STTHHHHHHHHHHHHHHHT-T-CCCHHHHHHHHHHHHHHHHHCHHHHHH-HHTTGGGG----
T ss_pred HHHHHHHHHhc--h----HHHHHHHHHHHHHHHHHcC-C-CCChHHHHHHHHHHHHHHhcCCHHHHH-HHHHHHhc----
Confidence 99888777554 2 4599999999999999999 3 388999999999999999999999999 99999999
Q ss_pred CCCCcchhhhheeheeecCCHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCChhHHhhc
Q psy7254 508 FRIPPNLREVVYYAGIKYGGVKEWQNCWAKYNSTRVPSERKLLLKVLGASRDPWILQRF 566 (567)
Q Consensus 508 ~~ip~dlr~~Vyc~gi~~g~~~~w~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~r~ 566 (567)
..||||+|..|||+|+++|+. |++++++|++++++.||..+|.||||++|+++++|+
T Consensus 615 ~~i~~~lr~~v~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~l~al~~~~~~~~~~~~ 671 (780)
T 1z5h_A 615 DSAEPEMRSSIATAYALVTGD--LKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTV 671 (780)
T ss_dssp GGSCHHHHHHHHHHHHHHTCC--HHHHHHHHHSCCSHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCcH--HHHHHHHHhcCCCHHHHHHHHHHhccCCCHHHHHHH
Confidence 379999999999999999987 999999999999999999999999999999999875
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=4.5e-68 Score=604.65 Aligned_cols=519 Identities=15% Similarity=0.086 Sum_probs=413.7
Q ss_pred CEEEEcCC-C-eEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeec--c--cCCeeEEEEeCCC
Q psy7254 1 MSIFRDRF-H-ISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDV--T--AKGVSVSVYAPPD 74 (567)
Q Consensus 1 i~i~~p~~-~-~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~--~--~~~~~i~v~~~p~ 74 (567)
|+|++|++ | +++|||+++++. ..++|+++++|+.++|||||++||+||+|..++.. + .+++++++|++|+
T Consensus 139 itIt~p~~~y~~~lSNg~l~~~~----~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~ 214 (867)
T 2gtq_A 139 TTIVADKKRYPVLLSNGNKIDGG----EFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEA 214 (867)
T ss_dssp EEEEEETTTCCEEEESSEEEEEE----ECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTT
T ss_pred EEEEEccccceEEEeCCccccce----eecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccc
Confidence 58999997 6 999999988765 45789999999999999999999999999988753 2 2358999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHH
Q psy7254 75 LLPQAKFALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHE 154 (567)
Q Consensus 75 ~~~~~~~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 154 (567)
..++++++++.+++++++||++||+|||++|+|+|++|+|..||||||||++|++..+++++...+...+..+..+||||
T Consensus 215 ~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHE 294 (867)
T 2gtq_A 215 DKPKVGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHE 294 (867)
T ss_dssp TGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999877777788899999999
Q ss_pred hhhcccccCCc---cccccccccccCccccCchhhhhhhHhhhhhhcc---------------------------c----
Q psy7254 155 LAHQVSVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQ---------------------------S---- 200 (567)
Q Consensus 155 laHqW~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~---------------------------p---- 200 (567)
+|||| |||+ +||++ +|| |||| |+|++..+.+... |
T Consensus 295 lAHqW--fGnlVT~~~W~d-lWL-------nEGf-Aty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~~ 363 (867)
T 2gtq_A 295 YFHNW--TGNRVTCRDWFQ-LSL-------KEGL-TVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRPA 363 (867)
T ss_dssp HHTTT--BTTTBEESSGGG-HHH-------HHHH-HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSCS
T ss_pred HHHHh--cCcEEEeccccc-ccc-------hHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcCC
Confidence 99999 9999 99999 999 9999 9999765443221 1
Q ss_pred ---chhhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhccc-
Q psy7254 201 ---QNGIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAKR- 270 (567)
Q Consensus 201 ---~~~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~~- 270 (567)
++...|+.++|.||++| ||+..+ |+ +.|+++|+.|+++|++ ++++++|| +++++
T Consensus 364 ~~~~i~~~f~~i~Y~KGa~vl~mL~~~l--G~------e~F~~glr~Yl~~~~~--------~~~t~~Df~~~l~~~sg~ 427 (867)
T 2gtq_A 364 SYEEMNNFYTMTVYEKGAEVVRMYHTLL--GE------EGFQKGMKLYFQRHDG--------QAVTCDDFRAAMADANGI 427 (867)
T ss_dssp EESCGGGGCSHHHHHHHHHHHHHHHHHH--HH------HHHHHHHHHHHHHHTT--------CEECHHHHHHHHHHHHTC
T ss_pred ChhhhhhhccchhhhHHHHHHHHHHHHH--CH------HHHHHHHHHHHHHhCC--------CCCCHHHHHHHHHHHhCC
Confidence 34556888999999999 999999 99 8899999999999999 99999999 33343
Q ss_pred --ccccccccCCCcceEEEec-------ceEEeeceeeecCCCCCccCCCCcEEE--EEEEEcc--CCccc---------
Q psy7254 271 --PVIPIATSGEVFPWNNVRL-------PTFAHPLRYVINIHPNLTTLDVKVVYH--FKKIRNL--GGYKE--------- 328 (567)
Q Consensus 271 --~~~~~W~~q~G~P~v~v~~-------~~~i~Q~rf~~~~~~~~~~~~~~~~W~--i~~~~~~--~~~~~--------- 328 (567)
..|++|+.|+|+|+++|++ .++|+|+++...+. +....|+ |++...+ +....
T Consensus 428 dl~~f~~W~~q~G~P~l~v~~~~~~~~~~l~l~Q~~~~~~~~------~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~ 501 (867)
T 2gtq_A 428 NLDQFALWYSQAGTPVLEAEGRLKNNIFELTVKQTVPPTPDM------TDKQPMMIPVKVGLLNRNGEAVAFDYQGKRAT 501 (867)
T ss_dssp CCGGGGHHHHCCSCCEEEEEEEEETTEEEEEEEEECCCBTTB------SCCCCCCEEEEEEEECTTCCBCCEECSSCEES
T ss_pred CHHHHHHHhcCCCCceEEEEEEecCCEEEEEEEEecCCCCCC------CCCceEEEEEEEEEEcCCCccccccccccccc
Confidence 2357999999999999875 37788999753211 1234576 4444322 21110
Q ss_pred ceEEEecCceeEEeCCC--CCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHH---HHHHHHH-----
Q psy7254 329 QEIVWMNMTDVTFKLPN--SIKWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASL---IDDAFTL----- 398 (567)
Q Consensus 329 ~~~~~~~~~~~~~~l~~--~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~L---idD~f~l----- 398 (567)
...+++++++.++.+++ ...|+.+|.+..+++||+|+-..++ ++..+..+. ++.+|.+. |.|...+
T Consensus 502 ~~~~~l~~~~~~~~~~~~~~~p~~~l~r~fs~~~~l~~~~~~~~-l~~l~~~~~---d~~~R~~a~~~L~~~~~~~~~~~ 577 (867)
T 2gtq_A 502 EAVLLLTEAEQTFLLEGVTEAVVPSLLRGFSAPVHLNYPYSDDD-LLLLLAHDS---DAFTRWEAAQTLYRRAVAANLAT 577 (867)
T ss_dssp CEEEEECSSEEEEEEBCCCSCCEEEESTTCCSSCEEECCCCHHH-HHHHHHHCS---CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCceEEEEeCCCCCCceEecCCCCccEEEECCCCHHH-HHHHHhhCC---ChhHHHHHHHHHHHHHHHHHHHH
Confidence 34678888877776652 4568999999999999997655543 233344333 37777666 8898888
Q ss_pred HHcCCc-c-hhhhhHhhhhhh-cCC-CchhHHHHHH--HHHHHHhhc--cCCch----hHHHHH-HHHHH---HHHHHhh
Q psy7254 399 SRAGLV-N-ATVPLELSTYLL-KEK-DYVPWATALE--HFQHWSTSL--SEASP----YRLFEQ-YVKKL---LTPISHH 462 (567)
Q Consensus 399 a~ag~l-~-~~~~l~l~~yL~-~E~-~y~~W~~a~~--~l~~~~~~~--~~~~~----~~~~~~-~~~~l---~~~~~~~ 462 (567)
+++|.. + ++.++++++++. +|+ |+.+|..++. .+..+...+ .+.+. ...+++ +...+ +.++|++
T Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 657 (867)
T 2gtq_A 578 LSDGVELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQ 657 (867)
T ss_dssp HHHTCCCCCCHHHHHHHHHHHHCSSSCHHHHHHHTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hhcCCCCCchHHHHHHHHHHhcCcCCCHHHHHHHhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667766 7 889999999876 787 9999999984 344444321 11111 234444 55556 8899987
Q ss_pred c-----c-ccc-CCchHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCCCCcchhhhheeheeecCCHHHHHHHH
Q psy7254 463 I-----G-WED-TGSHLEKLMRSDILAAAVLVGVDTVVKESKSKFNGWMEKGFRIPPNLREVVYYAGIKYGGVKEWQNCW 535 (567)
Q Consensus 463 l-----g-~~~-~~s~~~~~lR~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~~ip~dlr~~Vyc~gi~~g~~~~w~~l~ 535 (567)
+ | |++ .++...+.||..+|.++|..| ++|++.|+++|.+...|-...++.++ ++|...+.+.++.++.++
T Consensus 658 ~~~~~~~~~~~~~~~~~~r~lr~~~l~~l~~~~-~~~~~~a~~~~~~~a~nmt~~~~al~--~l~~~~~~~~~~~~~~f~ 734 (867)
T 2gtq_A 658 AAKQENQSYEYSPEAAGWRTLRNVCRAFVLRAD-PAHIETVAEKYGEMAQNMTHEWGILS--AVNGNESDTRNRLLAQFA 734 (867)
T ss_dssp HHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHC-TTHHHHHHHTHHHHCSSHHHHHHHHH--HHTTCCSHHHHHHHHHHH
T ss_pred hhccCCCCCCCChHHHHHHHHHHHHHHHHHhcC-ccHHHHHHHHHHHhCCCHhHHHHHHH--HHHhcCcccHHHHHHHHH
Confidence 7 7 876 567888999999999999999 99999999999976544335667777 777766667788999999
Q ss_pred HHHhcCCCHHHHHHHHHHhCCCCChhHHhh
Q psy7254 536 AKYNSTRVPSERKLLLKVLGASRDPWILQR 565 (567)
Q Consensus 536 ~~y~~~~~~~ek~~ll~aL~ct~d~~ll~r 565 (567)
++|+++....+|-.++. ||+++|.+++|
T Consensus 735 ~~~~~~~~~~~k~~~~~--a~~~~~~~~~~ 762 (867)
T 2gtq_A 735 DKFSDDALVMDKYFALV--GSSRRSDTLQQ 762 (867)
T ss_dssp HHTTTCHHHHHHHHHHH--HHCCSTTHHHH
T ss_pred HHHcCCchHHHHHHHHH--hcCCChHHHHH
Confidence 99999988899888888 68888888865
No 6
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=4.6e-58 Score=521.02 Aligned_cols=506 Identities=15% Similarity=0.091 Sum_probs=372.8
Q ss_pred CEEEEcCC-C-eEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeec--c--cCCeeEEEEeCCC
Q psy7254 1 MSIFRDRF-H-ISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDV--T--AKGVSVSVYAPPD 74 (567)
Q Consensus 1 i~i~~p~~-~-~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~--~--~~~~~i~v~~~p~ 74 (567)
|+|++|++ | +++|||+++++. ..++|+++++|+.++|||||++||+||+|+.++.. + .+++++++|++|+
T Consensus 164 itI~~p~~~y~~alSNg~l~~~~----~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~ 239 (891)
T 3b34_A 164 TKIIADKIKYPFLLSNGNRVAQG----ELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG 239 (891)
T ss_dssp EEEEEETTTCCEEEESSEEEEEE----ECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTT
T ss_pred EEEEeccccceEEEeCCccccce----eecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccC
Confidence 58999997 6 899999988775 45789999999999999999999999999988752 2 2358999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHH
Q psy7254 75 LLPQAKFALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHE 154 (567)
Q Consensus 75 ~~~~~~~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 154 (567)
..++++++++.+++++++||++||+|||++|+|+|++|+|..|||||||+++|++..+++++...+...+..+..+||||
T Consensus 240 ~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHE 319 (891)
T 3b34_A 240 NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHE 319 (891)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998877777788899999999
Q ss_pred hhhcccccCCc---cccccccccccCccccCchhhhhhhHhhhhhhcc---------------------------c----
Q psy7254 155 LAHQVSVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQ---------------------------S---- 200 (567)
Q Consensus 155 laHqW~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~---------------------------p---- 200 (567)
+|||| |||+ +||++ +|| |||| |+|++..+.+... |
T Consensus 320 lAHqW--FGNlVT~~~W~d-lWL-------nEGF-AtY~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~~ 388 (891)
T 3b34_A 320 YFHNW--TGNRVTCRDWFQ-LSL-------KEGL-TVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPD 388 (891)
T ss_dssp HHTTT--BTTTEEESSGGG-HHH-------HHHH-HHHHHHHHHHHHSCHHHHHHHHHHHHHHTHHHHHTSTTCCCSSCS
T ss_pred HHHHH--hCCCCcccchhh-cee-------hHHH-HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhhhhhccccCCCCccc
Confidence 99999 9999 99999 999 9999 9999765443221 1
Q ss_pred ---chhhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhccc-
Q psy7254 201 ---QNGIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAKR- 270 (567)
Q Consensus 201 ---~~~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~~- 270 (567)
++...|+.++|.||++| ||+..+ |+ +.|+++|+.|+++|++ ++++++|| ++++|
T Consensus 389 ~~~~i~~~f~~i~Y~KGa~VLrML~~~l--G~------e~F~~gLr~Yl~~~~~--------~~att~Df~~ale~~sg~ 452 (891)
T 3b34_A 389 MVIEMNNFYTLTVYEKGAEVIRMIHTLL--GE------ENFQKGMQLYFERHDG--------SAATCDDFVQAMEDASNV 452 (891)
T ss_dssp EESCGGGGCCHHHHHHHHHHHHHHHHHH--HH------HHHHHHHHHHHHHHTT--------EEECHHHHHHHHHHHHCC
T ss_pred cccccccccccchhhHHHHHHHHHHHHH--CH------HHHHHHHHHHHHhccC--------CCCCHHHHHHHHHHHhCC
Confidence 34556888999999999 999999 99 8899999999999999 99999999 33443
Q ss_pred --ccccccccCCCcceEEEec---------ceEEeeceeeecCCCCCccCCCCcEEE--EEEEEcc--CCccc-------
Q psy7254 271 --PVIPIATSGEVFPWNNVRL---------PTFAHPLRYVINIHPNLTTLDVKVVYH--FKKIRNL--GGYKE------- 328 (567)
Q Consensus 271 --~~~~~W~~q~G~P~v~v~~---------~~~i~Q~rf~~~~~~~~~~~~~~~~W~--i~~~~~~--~~~~~------- 328 (567)
..|++|+.|+|+|+++|++ .++|+|+++...+. +....|+ |++...+ +....
T Consensus 453 dL~~f~~W~~q~G~P~l~V~~~~~~~~~~~~ltl~Q~~~~~~~~------~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~ 526 (891)
T 3b34_A 453 DLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQ------AEKQPLHIPFAIELYDNEGKVIPLQKGGHP 526 (891)
T ss_dssp CCTTTTHHHHCCSCCEEEEEEEEETTTTEEEEEEEEECCCBTTB------SCCCCCCEEEEEEEECTTSCBCCCEETTEE
T ss_pred CHHHHHHHHcCCCCceEEEEEEeecCCCEEEEEEEEecCCCCCC------CCCceEEEEEEEEEEcCCCCcccccccccc
Confidence 2367999999999999875 37889998742211 1234566 5554422 21110
Q ss_pred -ceEEEecCceeEEeCCC--CCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHH-----
Q psy7254 329 -QEIVWMNMTDVTFKLPN--SIKWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSR----- 400 (567)
Q Consensus 329 -~~~~~~~~~~~~~~l~~--~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~----- 400 (567)
...+++++++.++.+++ ...|+++|.+.+|||||+||..+|+.+. +++.+ -++.+|.+.+.++.....
T Consensus 527 ~~~~~~l~~~~~~~~~~~v~~~P~~~l~~~~s~~~~v~~~~~~~~l~~-~l~~d---~d~~~R~~a~~~L~~~~~~~~~~ 602 (891)
T 3b34_A 527 VNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTF-LMRHA---RNDFSRWDAAQSLLATYIKLNVA 602 (891)
T ss_dssp CCSEEEECSSEEEEEECCCCSCCEEEESTTCCSSCEEECCCCHHHHHH-HHHHC---SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEecCCcEEEEEccCCCCCcEEEcCCCcceEEEeCCCCHHHHHH-HHhhC---CChhHHHHHHHHHHHHHHHHHHH
Confidence 24688888888777663 4569999999999999999998887664 45433 347888888877776433
Q ss_pred ---cC-Ccc-hhhhhHhhhhhhcCCCchhHHHHH-------HHHHHHHhhccCCch--------hHHHHHHHHHHHHHHH
Q psy7254 401 ---AG-LVN-ATVPLELSTYLLKEKDYVPWATAL-------EHFQHWSTSLSEASP--------YRLFEQYVKKLLTPIS 460 (567)
Q Consensus 401 ---ag-~l~-~~~~l~l~~yL~~E~~y~~W~~a~-------~~l~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~ 460 (567)
.| .+. ...+++.+..+..+...-|.-.+. ..|...+... +.+. ...+..-+...+..+|
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~l~lp~~~~~~~~~~~~-d~~~i~~~r~~~~~~la~~~~~~~~~~~ 681 (891)
T 3b34_A 603 RHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDII-DPIAIAEVREALTRTLATELADELLAIY 681 (891)
T ss_dssp HHHHTCCCCCCHHHHHHHHHHHHCSSSCHHHHHHHTSCCCHHHHHTTCSSC-CHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhcCCCcCccHHHHHHHHHHhcCCCcCHHHHHHHhcCCCHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 111 234666666555444455655553 2332222211 0111 1112222233346666
Q ss_pred hhccccc-----CCchHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCCCCcchhhhheeheeec---CCHHHHH
Q psy7254 461 HHIGWED-----TGSHLEKLMRSDILAAAVLVGVDTVVKESKSKFNGWMEKGFRIPPNLREVVYYAGIKY---GGVKEWQ 532 (567)
Q Consensus 461 ~~lg~~~-----~~s~~~~~lR~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~~ip~dlr~~Vyc~gi~~---g~~~~w~ 532 (567)
+++- .. .++.-.+.||...|.++|..+.....+.|.+.|..- + ..--+-..+.+.+.. ..++..+
T Consensus 682 ~~~~-~~~~~~~~~~~~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~a--~----nmtd~~~al~~~~~~~~~~~~~~l~ 754 (891)
T 3b34_A 682 NANY-QSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEA--N----NMTDALAALSAAVAAQLPCRDALMQ 754 (891)
T ss_dssp HHTC-CSSCCCSHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC--S----SHHHHHHHHHHHHHTTCTTHHHHHH
T ss_pred Hhhc-cCCCCCCHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHhhC--C----ChHHHHHHHHHHhccCcchHHHHHH
Confidence 6654 22 234567899999999999987677778888888752 2 111222222222221 3456777
Q ss_pred HHHHHHhcCCCHHHHHHHHHHhC
Q psy7254 533 NCWAKYNSTRVPSERKLLLKVLG 555 (567)
Q Consensus 533 ~l~~~y~~~~~~~ek~~ll~aL~ 555 (567)
...++++.....-+|=-.+.|.+
T Consensus 755 ~f~~~~~~~~lv~~kwf~~qa~~ 777 (891)
T 3b34_A 755 EYDDKWHQNGLVMDKWFILQATS 777 (891)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHhccCcHHHHHHHHHHhCC
Confidence 88888887666667766666644
No 7
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=1.5e-57 Score=513.68 Aligned_cols=506 Identities=15% Similarity=0.103 Sum_probs=351.3
Q ss_pred CEEEEcCC-C-eEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeec-----ccCCeeEEEEeCC
Q psy7254 1 MSIFRDRF-H-ISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDV-----TAKGVSVSVYAPP 73 (567)
Q Consensus 1 i~i~~p~~-~-~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~-----~~~~~~i~v~~~p 73 (567)
|+|++|++ | +++|||+++++. ..++|+++++|+.|+|||||++||+||+|..++.. ..+++++++|++|
T Consensus 146 itIt~p~~~~~valSNg~l~~~~----~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p 221 (889)
T 3ebh_A 146 VTVTADKEKYPVLLSNGDKVNEF----EIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEE 221 (889)
T ss_dssp EEEEEETTTCCEEEESSEEEEEE----EETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEG
T ss_pred EEEEEccccCeEEEccCccccce----ecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEecc
Confidence 58999997 8 579999988775 46789999999999999999999999999988753 2234899999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHH
Q psy7254 74 DLLPQAKFALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAH 153 (567)
Q Consensus 74 ~~~~~~~~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaH 153 (567)
+..++++++++.+++++++||++||+|||++|+|+|++|+|..||||||||++|+|..+++++..++...++.+..+|||
T Consensus 222 ~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAH 301 (889)
T 3ebh_A 222 KYVSKLQWALECLKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGH 301 (889)
T ss_dssp GGGGGGHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987777788889999999
Q ss_pred HhhhcccccCCc---cccccccccccCccccCchhhhhhhHhhhhhhcc---------------------------c---
Q psy7254 154 ELAHQVSVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQ---------------------------S--- 200 (567)
Q Consensus 154 ElaHqW~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~---------------------------p--- 200 (567)
|+|||| |||+ +||+| +|| |||| |+|++.++.+... |
T Consensus 302 ElAHQW--FGNlVT~~~W~d-lWL-------nEGF-AtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~ 370 (889)
T 3ebh_A 302 EYFHQY--TGNRVTLRDWFQ-LTL-------KEGL-TVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP 370 (889)
T ss_dssp HHHTTT--BTTTBEESSGGG-HHH-------HHHH-HHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC
T ss_pred HHHHHH--hcCeeeeccccc-cee-------eHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC
Confidence 999999 9999 99999 999 9999 9999865443221 1
Q ss_pred ----chhhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhcc-
Q psy7254 201 ----QNGIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAK- 269 (567)
Q Consensus 201 ----~~~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~- 269 (567)
++...|+.++|.||++| ||+.++ |+ +.|+++|+.|+++|++ ++++++|| ++++
T Consensus 371 ~~~~ei~~~f~~i~Y~KGa~vLrML~~~l--Gd------e~F~~gLr~Yl~~~~~--------~natt~Df~~ale~as~ 434 (889)
T 3ebh_A 371 ESYVSMENFYTTTVYDKGSEVMRMYLTIL--GE------EYYKKGFDIYIKKNDG--------NTATCEDFNYAMEQAYK 434 (889)
T ss_dssp SEESCGGGCCCHHHHHHHHHHHHHHHHHH--HH------HHHHHHHHHHHHHHTT--------SEECHHHHHHHHHHHHH
T ss_pred cchhhhhhhccchhhhHHHHHHHHHHHHh--CH------HHHHHHHHHHHHHcCC--------CCCCHHHHHHHHHHHhh
Confidence 34567889999999999 999999 99 8899999999999999 99999999 4444
Q ss_pred ------c---ccccccccCCCcceEEEec---------ceEEeeceeeecCCCCCccCCCCcEEE--EEEEEcc--CCcc
Q psy7254 270 ------R---PVIPIATSGEVFPWNNVRL---------PTFAHPLRYVINIHPNLTTLDVKVVYH--FKKIRNL--GGYK 327 (567)
Q Consensus 270 ------~---~~~~~W~~q~G~P~v~v~~---------~~~i~Q~rf~~~~~~~~~~~~~~~~W~--i~~~~~~--~~~~ 327 (567)
| ..|++|+.|+|+|+|+|++ .++|+|.++...+. +....|+ |++..-+ ++..
T Consensus 435 ~~~~~~g~dL~~f~~Wl~q~G~P~l~V~~~~d~~~~~~~ltl~Q~~~~~~~~------~~~~~~~IPl~v~l~~~~~G~~ 508 (889)
T 3ebh_A 435 MKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYTKPDENQ------KEKKPLFIPISVGLINPENGKE 508 (889)
T ss_dssp HHHTCTTCCCTGGGHHHHCCSCCEEEEEEEEETTTTEEEEEEEEECCCCSSC------SSCCCCCEEEEEEEECTTTCCB
T ss_pred hccCCCCCCHHHHHHHhcCCCCceEEEEEeecCCCCEEEEEEEEecCCCCCC------CCCceEEEEEEEEEEeCCCCcc
Confidence 4 4578999999999999975 47788888643221 1234676 4444322 2221
Q ss_pred c--ceEEEecCceeEEeCCC--CCceEEEcCCCeeEEEeecC--HHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHH--
Q psy7254 328 E--QEIVWMNMTDVTFKLPN--SIKWIKANVNQSGFYRVTYD--DHLWDALIQALKTNHEVFSPADRASLIDDAFTLS-- 399 (567)
Q Consensus 328 ~--~~~~~~~~~~~~~~l~~--~~~wi~~N~~~~gyyRV~Yd--~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la-- 399 (567)
. ..++.++.++.++.+++ ..-+..+|.+.++++|+.|+ .+.+ +-+++.+.+.++.-+-+|-|-.-.-+.
T Consensus 509 ~~~~~~l~l~~~~q~f~~~~~~~~p~~sl~r~fsa~v~l~~~~~~~~l---~~l~~~d~d~~~r~~a~~~l~~~~~~~~~ 585 (889)
T 3ebh_A 509 MISQTTLELTKESDTFVFNNIAVKPIPSLFRGFSAPVYIEDQLTDEER---ILLLKYDSDAFVRYNSCTNIYMKQILMNY 585 (889)
T ss_dssp CSCCEEEEECSSEEEEEESCCCSCCEEEESTTCCSSSEEECCCCHHHH---HHHHHHCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeEEEecCCcEEEEEcCCCCCCeEEEcCCCCceEEEeCCCCHHHH---HHHHhhCCChhHHHHHHHHHHHHHHHHHH
Confidence 1 35788899888887763 33467899999999999976 5544 444444444344433333222111111
Q ss_pred ---HcCC---------cch-hhhhHhhhhhhcCCCchhHHHHH-------HHHHHHHhhccCCc-------hhHHHHHHH
Q psy7254 400 ---RAGL---------VNA-TVPLELSTYLLKEKDYVPWATAL-------EHFQHWSTSLSEAS-------PYRLFEQYV 452 (567)
Q Consensus 400 ---~ag~---------l~~-~~~l~l~~yL~~E~~y~~W~~a~-------~~l~~~~~~~~~~~-------~~~~~~~~~ 452 (567)
..|. +.. ..+++.+..+....+-.|.-.|. ..|...+....... ....+..-+
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~ 665 (889)
T 3ebh_A 586 NEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKL 665 (889)
T ss_dssp HHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHTCTTSCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccccccccccccccCHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1121 111 23555555554444444444443 22222111100000 011111222
Q ss_pred HHHHHHHHhhcc------------ccc-CCchHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCCCCcchhhhhe
Q psy7254 453 KKLLTPISHHIG------------WED-TGSHLEKLMRSDILAAAVLVGVDTVVKESKSKFNGWMEKGFRIPPNLREVVY 519 (567)
Q Consensus 453 ~~l~~~~~~~lg------------~~~-~~s~~~~~lR~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~~ip~dlr~~Vy 519 (567)
...+..+|+++. ... .+..-.+.||...|.++|..+.+.....|.+.|+.- ..--|-..+
T Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~a-------nmtd~~~al 738 (889)
T 3ebh_A 666 NDVYYKMFKSLEAKADDLTYFNDESHVDFDQMNMRTLRNTLLSLLSKAQYPNILNEIIEHSKSP-------YPSNWLTSL 738 (889)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTTCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHTTCS-------CHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHhhc-------ChhHHHHHH
Confidence 222333444331 111 234567899999999999999888888888888753 111122222
Q ss_pred eheee-cCCHHHHHHHHHHHhcCCCHHHHHHHHHH
Q psy7254 520 YAGIK-YGGVKEWQNCWAKYNSTRVPSERKLLLKV 553 (567)
Q Consensus 520 c~gi~-~g~~~~w~~l~~~y~~~~~~~ek~~ll~a 553 (567)
...+. ...++..+...++++.....-+|=-.+.|
T Consensus 739 ~~~~~~~~~~~~l~~f~~~~~~~~lv~dkwf~~qa 773 (889)
T 3ebh_A 739 SVSAYFDKYFELYDKTYKLSKDDELLLQEWLKTVS 773 (889)
T ss_dssp HHGGGSTTHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHhcChhHHHHHHHHHHHhCCCcchhhHhHHHhh
Confidence 21111 11123455555555555545555555555
No 8
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-57 Score=482.31 Aligned_cols=279 Identities=25% Similarity=0.423 Sum_probs=245.2
Q ss_pred CcceEEEec---ceEEeeceeeecCCCCCccCCCCcEEEE--EEEEccCCcccceEEEecCceeEEeCCCCCceEEEcCC
Q psy7254 281 VFPWNNVRL---PTFAHPLRYVINIHPNLTTLDVKVVYHF--KKIRNLGGYKEQEIVWMNMTDVTFKLPNSIKWIKANVN 355 (567)
Q Consensus 281 G~P~v~v~~---~~~i~Q~rf~~~~~~~~~~~~~~~~W~i--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~wi~~N~~ 355 (567)
|||+|+|++ .+.|+|+||+.+.+.. ++.++.|+| +|.+++++ ....+||++++.++.++.+++||++|.+
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~---~~~~~~W~IPl~~~~~~~~--~~~~~~l~~~~~~i~l~~~~~wi~~N~~ 75 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGA---PDTGYLWHVPLTFITSKSD--MVHRFLLKTKTDVLILPEEVEWIKFNVG 75 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC-------------CCCCEEEEEEESSCS--SCEEEEECSSEEEEECSSCCSCEEEEES
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCC---CCCCeEEEEEEEEEeCCCC--ccceEEEecCceEEEcCCCCceEEEeCC
Confidence 899999987 6899999999864321 124578984 56665543 2356788888888888877789999999
Q ss_pred CeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHcCCcchhhhhHhhhhhhcCCCchhHHHHHHHHHHH
Q psy7254 356 QSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSRAGLVNATVPLELSTYLLKEKDYVPWATALEHFQHW 435 (567)
Q Consensus 356 ~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~ag~l~~~~~l~l~~yL~~E~~y~~W~~a~~~l~~~ 435 (567)
++|||||+||+++|++|+++|++|++.||+.||||||||+|+||++|.++|+.+|+|++||++|++|+||.++++.|..+
T Consensus 76 ~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~~~l~~l 155 (419)
T 3rjo_A 76 MNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPM 155 (419)
T ss_dssp SSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 99999999999999999999998888999999999999999999999999999999999999999999999999766665
Q ss_pred HhhccCC---chhHHHHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC--CC
Q psy7254 436 STSLSEA---SPYRLFEQYVKKLLTPISHHIGWEDTGSHLEKLMRSDILAAAVLVGVDTVVKESKSKFNGWMEKGF--RI 510 (567)
Q Consensus 436 ~~~~~~~---~~~~~~~~~~~~l~~~~~~~lg~~~~~s~~~~~lR~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~--~i 510 (567)
...+.+. +.++.|++|++++++|+++++||++++++.++++|..++.+||.+|+++|+++|+++|++|++++. .|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i 235 (419)
T 3rjo_A 156 YKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTDEGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSL 235 (419)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSCC
T ss_pred HHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhCCCCCCC
Confidence 5544322 468999999999999999999999989999999999999999999999999999999999998753 69
Q ss_pred CcchhhhheeheeecCCHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCChhHHhhc
Q psy7254 511 PPNLREVVYYAGIKYGGVKEWQNCWAKYNSTRVPSERKLLLKVLGASRDPWILQRF 566 (567)
Q Consensus 511 p~dlr~~Vyc~gi~~g~~~~w~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~r~ 566 (567)
|||+|++|||+|+++ +++|+++|++|++++++.||..+|.||||++||++++|+
T Consensus 236 ~~dlr~~Vy~~~~~~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~ 289 (419)
T 3rjo_A 236 PVDVTLAVFAVGAQS--TEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWL 289 (419)
T ss_dssp CGGGHHHHHHHHTTS--HHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred CCCcceeEEeeeeCC--HHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHH
Confidence 999999999999986 899999999999999999999999999999999999985
No 9
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.5e-50 Score=446.92 Aligned_cols=336 Identities=15% Similarity=0.160 Sum_probs=267.6
Q ss_pred CEEEEcCCCeEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeecccCCeeEEEEeCCCCchhHH
Q psy7254 1 MSIFRDRFHISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDVTAKGVSVSVYAPPDLLPQAK 80 (567)
Q Consensus 1 i~i~~p~~~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~~~~i~v~~~p~~~~~~~ 80 (567)
|+|++|++|+|+|||..... ...+| +++|+.++|||+|++||+||+|...+. |+++++|++|+..+.++
T Consensus 168 i~i~~p~~~~alsng~~~~~-----~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~~----g~~~~v~~~p~~~~~~~ 236 (605)
T 3cia_A 168 ARITTDKDLLAVMSANNEPG-----TERDG--DYFFSMPQAIPPYLIAIGVGDLEFKAM----SHQTGIYAESYILDAAV 236 (605)
T ss_dssp EEEECCTTCEEEESSEEC---------CCS--EEEEEEEEEECGGGCCEEEESCEEEES----SSSEEEEECSTTHHHHH
T ss_pred EEEEEcCCcEEEecCCccce-----ecCCC--eEEEeeCCCccceeEEEEEeeeeEecC----CCeEEEEeccChHHHHH
Confidence 58999999999988743332 12334 789999999999999999999998763 66799999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcceeecC-CCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHhhhcc
Q psy7254 81 FALNTSTHMMDFYEEFFGVPYPLPKQDLIAIP-DFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQV 159 (567)
Q Consensus 81 ~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p-~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 159 (567)
++++.+++++++|+++|| |||++|+|+|++| +|+.|||||||+ +|.+..++.++. .+..+||||+||||
T Consensus 237 ~~~~~~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqW 306 (605)
T 3cia_A 237 AEFDDTQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSW 306 (605)
T ss_dssp HHSTTHHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHh
Confidence 999999999999999999 9999999999995 899999999998 677777776542 13579999999999
Q ss_pred cccCCc---cccccccccccCccccCchhhhhhhHhhhhhhccc------------------------------------
Q psy7254 160 SVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQS------------------------------------ 200 (567)
Q Consensus 160 ~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~p------------------------------------ 200 (567)
|||+ +||+| +|| |||| |+|++++++++.+|
T Consensus 307 --fGnlVT~~~W~d-lWL-------nEGf-AtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~pl~~~~~~~ 375 (605)
T 3cia_A 307 --SGNLVTNESWRD-LWL-------NEGF-TSYVENRIMEAVFGTDRAVMEQALGAQDLNAEILELDASDTQLYIDLKGR 375 (605)
T ss_dssp --BTTTEEESSTTS-THH-------HHHH-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSCTTTTSSSCCCTTC
T ss_pred --hccccccCcchH-hHH-------HHHH-HHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhhccCCCCcccCCCCC
Confidence 9999 99999 999 9999 99999887665422
Q ss_pred chhhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhccc----
Q psy7254 201 QNGIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAKR---- 270 (567)
Q Consensus 201 ~~~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~~---- 270 (567)
++...|+.++|.||+++ ||+..+ |. +.|+++|+.|++++++ ++++++|| ++.++
T Consensus 376 ~~~~~f~~i~Y~KGa~vl~mL~~~l--G~------e~F~~~lr~yl~~~~~--------~~~t~~df~~~l~~~~~~~~~ 439 (605)
T 3cia_A 376 DPDDAFSGVPYVKGQLFLMYLEEKF--GR------ERFDAFVLEYFDSHAF--------QSLGTDNFVKYLKANLTDKYP 439 (605)
T ss_dssp CTTTSCCSHHHHHHHHHHHHHHHHH--CH------HHHHHHHHHHHHHTTT--------EEECHHHHHHHHHHTTTTTST
T ss_pred ChhHhhCccchhHHHHHHHHHHHHh--Ch------HHHHHHHHHHHHHhCc--------CCCCHHHHHHHHHHHhccccc
Confidence 22346788999999999 999988 99 8899999999999999 99999999 33321
Q ss_pred ----c-cccccccCCCcceEEEecceEEeeceeeecCCCCCccCCCCcEEEEEEEEccCCcccceEEEecCceeEEeCCC
Q psy7254 271 ----P-VIPIATSGEVFPWNNVRLPTFAHPLRYVINIHPNLTTLDVKVVYHFKKIRNLGGYKEQEIVWMNMTDVTFKLPN 345 (567)
Q Consensus 271 ----~-~~~~W~~q~G~P~v~v~~~~~i~Q~rf~~~~~~~~~~~~~~~~W~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (567)
. +|++|+.|+|+|++++.........-..+ ..+|. ..... +
T Consensus 440 ~~l~~~~~~~W~~~~G~P~~~~~~~~~~~~~~~~l-----------~~~w~------------------~~~~~----~- 485 (605)
T 3cia_A 440 NIVSDNEINEWIFKAGLPSYAPQPTSNAFKVIDKQ-----------INQLV------------------TDELT----L- 485 (605)
T ss_dssp TSSCHHHHHHHHHSSSCCSSSCCCCCHHHHHHHHH-----------TCCTT------------------TTSSC----C-
T ss_pred cccchhhHHHHhcCCCCCceeccCCchHHHHHHHH-----------HHHHH------------------hcCCC----c-
Confidence 2 68999999999988765411000000000 01121 11000 0
Q ss_pred CCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHcCCcchhhhhHhhhhhhcCCCchhH
Q psy7254 346 SIKWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSRAGLVNATVPLELSTYLLKEKDYVPW 425 (567)
Q Consensus 346 ~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~ag~l~~~~~l~l~~yL~~E~~y~~W 425 (567)
..+.|++|+..+|..++++|.+ .|+ .+|+++|||+|+|+.++.. ++.++.++++.++.++.+|
T Consensus 486 -----------~~~~~~~~~~~~~~~~l~~l~~---~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~~ 548 (605)
T 3cia_A 486 -----------EQLPTAQWTLHEWLHFINNLPV---DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEVY 548 (605)
T ss_dssp -----------SCSGGGGCCSHHHHHHHHHSCS---CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGGH
T ss_pred -----------cccchhhCCHHHHHHHHHhcCc---cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhHH
Confidence 0123999999999999999975 588 9999999999999887655 6899999999999999999
Q ss_pred HHHHHHHHHH
Q psy7254 426 ATALEHFQHW 435 (567)
Q Consensus 426 ~~a~~~l~~~ 435 (567)
..+...|..+
T Consensus 549 ~~~~~~l~~~ 558 (605)
T 3cia_A 549 PAMAKYLKSI 558 (605)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHc
Confidence 9988777664
No 10
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=2.2e-48 Score=429.89 Aligned_cols=319 Identities=15% Similarity=0.167 Sum_probs=251.6
Q ss_pred CEEEEcCCCeEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeecccCCeeEEEEeCCCCchhHH
Q psy7254 1 MSIFRDRFHISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDVTAKGVSVSVYAPPDLLPQAK 80 (567)
Q Consensus 1 i~i~~p~~~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~~~~i~v~~~p~~~~~~~ 80 (567)
|+|++|++++|+|||++.+.... ..++++++++|..++|||||++||+||+|+..+ .|+++++|++|+..++++
T Consensus 156 i~I~~p~~~~alsng~~~~~~~~--~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~ 229 (608)
T 3u9w_A 156 AEVSVPKELVALMSAIRDGETPD--PEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSA 229 (608)
T ss_dssp EEEEEETTSEEEESSEEEEEEEC--TTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHH
T ss_pred EEeeCCcceeeeeeccccceeec--cCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHH
Confidence 58999999999999998765421 345788999999999999999999999998655 356789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHhhhcc
Q psy7254 81 FALNTSTHMMDFYEEFFGVPYPLPKQDLIAI-PDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQV 159 (567)
Q Consensus 81 ~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~-p~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 159 (567)
++++.++++|++||++|| |||++++++|++ |+|+.||||||||++++++.++.++. +..+||||+||||
T Consensus 230 ~~~~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqW 299 (608)
T 3u9w_A 230 YEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSW 299 (608)
T ss_dssp HHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhh
Confidence 999999999999999999 999999998887 78999999999999999998776543 3468999999999
Q ss_pred cccCCc---cccccccccccCccccCchhhhhhhHhhhhhhccc------------------------------------
Q psy7254 160 SVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQS------------------------------------ 200 (567)
Q Consensus 160 ~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~p------------------------------------ 200 (567)
|||+ +||+| +|| |||| |+|+++++.++.+|
T Consensus 300 --fGnlVT~~~W~d-~WL-------nEGf-Aty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 368 (608)
T 3u9w_A 300 --TGNLVTNKTWDH-FWL-------NEGH-TVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLT 368 (608)
T ss_dssp --BTTTEEESSGGG-HHH-------HHHH-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCT
T ss_pred --hcCcCccccccc-hhH-------HHhH-HHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccc
Confidence 9999 99999 999 9999 99999988776532
Q ss_pred --chhhcccccccccchhh--hccchhhhH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhccc-
Q psy7254 201 --QNGIHKRSLYEHNGVAV--CSQNRALII-ASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAKR- 270 (567)
Q Consensus 201 --~~~~~~~~i~Y~Kg~~v--ml~~~~~~G-~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~~- 270 (567)
+....|+.++|.||+++ ||+..+ | + +.|+++|+.|++++++ ++++++|| ++.++
T Consensus 369 ~~~~~~~f~~i~Y~KGa~vL~mL~~~l--G~~------~~F~~~lr~Yl~~~~~--------~~~tt~Df~~~l~~~~~~ 432 (608)
T 3u9w_A 369 DIDPDVAYSSVPYEKGFALLFYLEQLL--GGP------EIFLGFLKAYVEKFSY--------KSITTDDWKDFLYSYFKD 432 (608)
T ss_dssp TCCHHHHCSSHHHHHHHHHHHHHHHHH--TCH------HHHHHHHHHHHHHHTT--------EEECHHHHHHHHHHHTGG
T ss_pred cCChhhcccHHHHhHHHHHHHHHHHHh--CCH------HHHHHHHHHHHHhccC--------CCCCHHHHHHHHHHHhcc
Confidence 22346899999999998 999988 8 5 6799999999999999 99999998 22222
Q ss_pred -------ccccccccCCCcceEEEec-------ceEEeeceeeecCCCCCccCCCCcEEEEEEEEccCCcccceEEEecC
Q psy7254 271 -------PVIPIATSGEVFPWNNVRL-------PTFAHPLRYVINIHPNLTTLDVKVVYHFKKIRNLGGYKEQEIVWMNM 336 (567)
Q Consensus 271 -------~~~~~W~~q~G~P~v~v~~-------~~~i~Q~rf~~~~~~~~~~~~~~~~W~i~~~~~~~~~~~~~~~~~~~ 336 (567)
.+|++|+.|+|+|+|+|.+ .+.++|+++...... . +. . +.
T Consensus 433 ~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~~~~~~l~q~~~~~~~~~---~---------------~~----~----~~ 486 (608)
T 3u9w_A 433 KVDVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITAKEDD---L---------------NS----F----NA 486 (608)
T ss_dssp GHHHHHTSCHHHHHHCCSSCSSCCCCCCTTTHHHHHHHHHHHHCCGGG---G---------------GG----C----CG
T ss_pred ccchhhHHHHHHHhcCCCCCceeeeeccccccceeeHHhHHhhcCCcc---c---------------cc----c----Ch
Confidence 4589999999999998876 244566555432100 0 00 0 00
Q ss_pred ceeEEeCCCCCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHcCCcchhhhhHhhh
Q psy7254 337 TDVTFKLPNSIKWIKANVNQSGFYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSRAGLVNATVPLELST 414 (567)
Q Consensus 337 ~~~~~~l~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~ag~l~~~~~l~l~~ 414 (567)
.++ .+| ....|..+++.|... ..+ +.++.+.||+.+.|..++ |.++.+.-..
T Consensus 487 ----~~~---~~~---------------~~~q~~~fl~~l~~~-~~l-~~~~~~~l~~~y~~~~~~--n~ei~~~w~~ 538 (608)
T 3u9w_A 487 ----TDL---KDL---------------SSHQLNEFLAQTLQR-APL-PLGHIKRMQEVYNFNAIN--NSEIRFRWLR 538 (608)
T ss_dssp ----GGG---TTC---------------CHHHHHHHHHHHHTT-CCC-CHHHHHHHHHHHCGGGCC--CHHHHHHHHH
T ss_pred ----hhh---hhC---------------CHHHHHHHHHhcccc-CCC-CHHHHHHHHHHhCCCCCC--CHHHHHHHHH
Confidence 001 123 456677777777543 234 456788899999877654 6666655443
No 11
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=3.1e-47 Score=421.87 Aligned_cols=340 Identities=14% Similarity=0.127 Sum_probs=258.8
Q ss_pred CEEEEcCCCeEeecCCcccccccccccCCCeEEEEEecCCCCchhhhhheecccceeeecccCCeeEEEEeCCCCchhHH
Q psy7254 1 MSIFRDRFHISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLVAFVVCDYQAITDVTAKGVSVSVYAPPDLLPQAK 80 (567)
Q Consensus 1 i~i~~p~~~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~~~~i~v~~~p~~~~~~~ 80 (567)
|+|++| ++|++||...... ..+++ +++|+.|+|||+|++||+||+|...+. |+++++|++|+..+.++
T Consensus 169 i~I~~p--~~vv~sg~~~~~~----~~~~~--~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~ 236 (632)
T 2xq0_A 169 ASIESP--LPVVFSGIRIEDT----SKDTN--IYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQ 236 (632)
T ss_dssp EEEECS--SCEEESSEECCCC--------C--EEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHH
T ss_pred EEEEEc--hHHhccCccccce----ecCCC--eEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHH
Confidence 578999 9888665443332 22333 799999999999999999999998763 56799999999989999
Q ss_pred HHHH-HHHHHHHHHHHHhCCCCCCCCcceeecC-CCCchhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHhhhc
Q psy7254 81 FALN-TSTHMMDFYEEFFGVPYPLPKQDLIAIP-DFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQ 158 (567)
Q Consensus 81 ~~l~-~~~~~l~~~e~~fg~~YP~~k~d~v~~p-~~~~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHq 158 (567)
++++ .+.+++++||++|| |||++|+|+|++| +|+.|||||||| +|.+..++.++. .+..+||||+|||
T Consensus 237 ~~~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~gl-t~~~~~ll~~~~--------~~~~viaHElAHq 306 (632)
T 2xq0_A 237 WEFENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNM-TFATPTLLAHDR--------SNIDVIAHELAHS 306 (632)
T ss_dssp HHHTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTC-EEECGGGCCSSS--------CSTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceE-EEeeceeccCch--------hHHHHHHHHHHHH
Confidence 9998 99999999999999 9999999999995 899999999998 566666665432 1357999999999
Q ss_pred ccccCCc---cccccccccccCccccCchhhhhhhHhhhhhhccc-----------------------------------
Q psy7254 159 VSVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQS----------------------------------- 200 (567)
Q Consensus 159 W~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~p----------------------------------- 200 (567)
| |||+ +||+| +|| |||| |+|++++++++.+|
T Consensus 307 W--fGnlVT~~~W~d-lWL-------nEGf-AtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~pl~~l~~~~ 375 (632)
T 2xq0_A 307 W--SGNLVTNCSWNH-FWL-------NEGW-TVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDSMKDPERFSTLVQNL 375 (632)
T ss_dssp T--BTTTEEESSGGG-THH-------HHHH-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCSSHHHHTSSSCCC
T ss_pred H--hcCCCccCCcch-hhH-------HHHH-HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcccCCCCcccccCC
Confidence 9 9999 99999 999 9999 99999887765422
Q ss_pred ----chhhcccccccccchhh--hccchhhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCcCCccch----hhccc
Q psy7254 201 ----QNGIHKRSLYEHNGVAV--CSQNRALIIASVVLSILFLSSLIIAYVGPQNDCPCIGEKPVFLQDEDL----NGAKR 270 (567)
Q Consensus 201 ----~~~~~~~~i~Y~Kg~~v--ml~~~~~~G~~~~~~~~~f~~~l~~yl~~~~~~~~~~~~~~~~~~~d~----~~~~~ 270 (567)
++...|+.++|.||+++ ||+..+ |.. +.|+++|+.|++++++ ++++++|| ++.++
T Consensus 376 ~~~~~~~~~f~~i~Y~KGa~vL~mL~~~l--G~~-----e~F~~~Lr~Yl~~~~~--------~~~tt~Df~~~l~~~~~ 440 (632)
T 2xq0_A 376 NDNTDPDDAFSTVPYEKGFNLLFHLETIL--GGK-----AEFDPFIRHYFKKFAK--------KSLDTFQFLDTLYEFYP 440 (632)
T ss_dssp CSSSCGGGGCSSHHHHHHHHHHHHHHHHT--TSH-----HHHHHHHHHHHHHTTT--------EEECHHHHHHHHHHHCG
T ss_pred CCCCChHHhccchhhHHHHHHHHHHHHHh--CCh-----HHHHHHHHHHHHHhCc--------CCCCHHHHHHHHHHHhh
Confidence 12346788999999999 999988 961 4699999999999999 99999999 33331
Q ss_pred -------c-cccccccCCCcceEEEecce------EEeeceeeecCCCCCccCCCCcEEEEEEEEccCCccc-ceEEEec
Q psy7254 271 -------P-VIPIATSGEVFPWNNVRLPT------FAHPLRYVINIHPNLTTLDVKVVYHFKKIRNLGGYKE-QEIVWMN 335 (567)
Q Consensus 271 -------~-~~~~W~~q~G~P~v~v~~~~------~i~Q~rf~~~~~~~~~~~~~~~~W~i~~~~~~~~~~~-~~~~~~~ 335 (567)
. +|++|+.|+|+|+ ++...- ..-+.|+....+. ...... ..
T Consensus 441 ~~~~~l~~~~~~~W~~~~G~P~-~~~~~~~~~~~~~~l~~~w~~~~~~------------------~~~~~~~~~----- 496 (632)
T 2xq0_A 441 EKKEILDSVDWETWLYKPGMPP-RPHFITALADNVYQLADKWVEMAQH------------------LKTTEDFRS----- 496 (632)
T ss_dssp GGHHHHHTSCHHHHHHCCSCCC-CCCCCCHHHHHHHHHHHHHHHHTTT------------------CCSHHHHHH-----
T ss_pred hccccccHHHHHHHhcCCCCCC-CcCCCchHHHHHHHHHHHHHhcccc------------------ccccccccc-----
Confidence 3 7999999999998 554311 0111122211000 000000 00
Q ss_pred CceeEEeCCCCCceEEEcCCCeeEEEeecCHHHHHHHHHHHhhC----------CCCCChhhHHHHHHHHHH--HHHcCC
Q psy7254 336 MTDVTFKLPNSIKWIKANVNQSGFYRVTYDDHLWDALIQALKTN----------HEVFSPADRASLIDDAFT--LSRAGL 403 (567)
Q Consensus 336 ~~~~~~~l~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~----------~~~i~~~~Ra~LidD~f~--la~ag~ 403 (567)
.++.. + . -+|+...|..++++|..+ ...|+ .+|+++|||+++ |+.++.
T Consensus 497 ------~~~~~-d-----~-------~~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~n 556 (632)
T 2xq0_A 497 ------EFNAI-D-----I-------KDFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQN 556 (632)
T ss_dssp ------HCCGG-G-----G-------TTCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCCC
T ss_pred ------CCCHH-H-----H-------hhCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCcC
Confidence 01110 1 1 178999999999999754 22577 999999999999 776554
Q ss_pred cchhhhhHhhhhhhcCCCchhHHHHHHHHHH
Q psy7254 404 VNATVPLELSTYLLKEKDYVPWATALEHFQH 434 (567)
Q Consensus 404 l~~~~~l~l~~yL~~E~~y~~W~~a~~~l~~ 434 (567)
. ++.++.++++.++.++.+|..+...|..
T Consensus 557 ~--ei~~~~~~~~~~~~~~~~~~~~~~~l~~ 585 (632)
T 2xq0_A 557 A--EVVFKMFKFQIFAKLQEEYKHLADWLGT 585 (632)
T ss_dssp H--HHHHHHHHHHHHTTCGGGHHHHHHHTTT
T ss_pred H--HHHHHHHHHHHhcCChhHHHHHHHHHHH
Confidence 4 8999999999999999999988765543
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.81 E-value=2.8e-20 Score=203.30 Aligned_cols=248 Identities=11% Similarity=0.043 Sum_probs=165.6
Q ss_pred CEEEEcCC---CeEeecCCcccccccccccCCCeEEEEEecCCCCchhhh--hheecccceeeecccCCeeEEEEeCCCC
Q psy7254 1 MSIFRDRF---HISLFNMPITSTDDVGFYMGTGLLRDDFQESVEMSTYLV--AFVVCDYQAITDVTAKGVSVSVYAPPDL 75 (567)
Q Consensus 1 i~i~~p~~---~~alsn~~~~~~~~~~~~~~~~~~~~~F~~t~~mstyl~--a~~vg~f~~~~~~~~~~~~i~v~~~p~~ 75 (567)
++|..|++ |.+-+.++..+.. +.+.. +|....- -.|+ -+.+|+|+..+... .|+++++......
T Consensus 125 ~~i~~P~~~~~W~vaT~L~~~~~~------~~~~~--~f~a~~y--d~LvDsPv~~G~~~~~~~~~-~g~p~~l~v~~~~ 193 (597)
T 4fgm_A 125 LHLHAPPEAPLWKVATGMPRKSGQ------PHSWG--CFRADNY--DALIDYPFLIGDLTIEEFIA-HGIKHSLVLSGRH 193 (597)
T ss_dssp EEECCCTTCTTCEEEESSCBCSSC------TTSSE--EEEESSH--HHHTTCCEEEESCEEEEEEE-TTEEEEEEEESSC
T ss_pred EEEECCCCCCcceEEecCCccCCC------CCcce--EEEcCCH--HHHhcchhcccCcEEEEecc-CCeEEEEEEEcCC
Confidence 46778888 8887777654331 12332 3322110 0011 13578988777643 7888876433323
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCchhhhhccc--ceecccccccCCCCCchhhHHHHHHHHH
Q psy7254 76 LPQAKFALNTSTHMMDFYEEFFGVPYPLPKQDLIAI-PDFGTGAMENWGL--ITYRETSILYDEQETSASGHNWVAVVVA 152 (567)
Q Consensus 76 ~~~~~~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~-p~~~~game~~gl--i~~~e~~ll~~~~~~~~~~~~~~~~~ia 152 (567)
....+..++.+++++++++++|| |||+++++++.. ++...||||+.+. +++++..+.......+.........+++
T Consensus 194 ~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~lia 272 (597)
T 4fgm_A 194 YADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSLCC 272 (597)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhhHh
Confidence 33468889999999999999999 999999999864 3457899999885 4466654432222223345667789999
Q ss_pred HHhhhcccccCCc--------------cccccccccccCccccCchhhhhhhHhhhhhhcc-------------------
Q psy7254 153 HELAHQVSVVGSA--------------KDVNSVLWKKQSNVKMNDHDVDDVAFLTGVNHYQ------------------- 199 (567)
Q Consensus 153 HElaHqW~~fGnl--------------~~w~~~~WL~~~~~~~~Egf~a~y~~~~~~~~~~------------------- 199 (567)
||++||| |||. ++|++ +|| +||| |+|++.++.....
T Consensus 273 HE~~H~W--~g~~i~p~~~~~~d~~~~~~~~~-lWl-------~EG~-t~Y~~~l~~~r~G~~~~~~~~~~l~~~i~~~~ 341 (597)
T 4fgm_A 273 HEYFHSW--NIKTLKPKAFLPYQLEKESYTEQ-LWF-------YEGM-TSYFDDYLLHTSGIIDEKRYLKLLGDTLSRVE 341 (597)
T ss_dssp HHHHHTT--BTTTBCBGGGSSCCCSSCCCCST-HHH-------HTHH-HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred hhhheee--ccccccccccccccccccccccc-chh-------hhhH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhh
Confidence 9999999 9976 34789 999 9999 9999987665431
Q ss_pred --cc-----h-hhc-------c---------cccccccchhh--hccchhh--h-HHHHHHHHHHHHHHHHHhhcccCCC
Q psy7254 200 --SQ-----N-GIH-------K---------RSLYEHNGVAV--CSQNRAL--I-IASVVLSILFLSSLIIAYVGPQNDC 250 (567)
Q Consensus 200 --p~-----~-~~~-------~---------~~i~Y~Kg~~v--ml~~~~~--~-G~~~~~~~~~f~~~l~~yl~~~~~~ 250 (567)
|. + ... + ....|.||+.+ ||...++ . |. ..|...++.|++++..
T Consensus 342 ~~~gr~~~sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~------~sldd~mr~l~~~~~~- 414 (597)
T 4fgm_A 342 RGAGQYQQSVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHK------LTLARVMKELWHEFGK- 414 (597)
T ss_dssp HSGGGGTCCHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTS------CCHHHHHHHHHHHHTT-
T ss_pred cCCCccccChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCc------hHHHHHHHHHHHHhCc-
Confidence 10 0 000 1 11459999998 6665541 1 33 3588999999888753
Q ss_pred CCCCCCCCcCCccch----hhccc----ccccccccCCCcc
Q psy7254 251 PCIGEKPVFLQDEDL----NGAKR----PVIPIATSGEVFP 283 (567)
Q Consensus 251 ~~~~~~~~~~~~~d~----~~~~~----~~~~~W~~q~G~P 283 (567)
+.++++++|| ++.+| +|++.|+.+++.|
T Consensus 415 -----~~~~~t~~d~~~~~e~~sG~dl~~ff~~~l~~t~~~ 450 (597)
T 4fgm_A 415 -----TSIGTADDTVINWLNQYPGIDISDFLKDALYNKESL 450 (597)
T ss_dssp -----TTCCBCTTHHHHHHHTSTTCCCHHHHHHHHHSCSCC
T ss_pred -----CCCCCCHHHHHHHHHHhcCcCHHHHHHHHHhCCCCc
Confidence 0046788888 44444 7999999998864
No 13
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.21 E-value=0.87 Score=37.32 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhh---cccceecccccccCCCCCchhhHHHHHHHHHHHhhhcc
Q psy7254 85 TSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMEN---WGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQV 159 (567)
Q Consensus 85 ~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~---~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 159 (567)
...++++-+.+..|+|. +++-++-.+...+-++.. -+.|.+... ++ + ......++.++|||++|-=
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll-~-----~l~~~El~aVlaHElgH~~ 95 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PTVAIYDSADINAFATGAKRDDSLVAVSTG-LL-H-----NMTRDEAEAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CEEEEECCSSEEEEEECCC--CCEEEEEHH-HH-H-----HSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--CeEEEEECCCcCEEEEecCCCCCEEEEcHH-HH-h-----hCCHHHHHHHHHHHHHHHH
Confidence 34455666666777653 454444333211112211 133444432 22 1 1134678899999999975
No 14
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis}
Probab=67.41 E-value=2.9 Score=46.17 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=28.4
Q ss_pred ccCCCCCchhhHHHHHHHHHHHhhhcc-------cccCCc-ccccc
Q psy7254 133 LYDEQETSASGHNWVAVVVAHELAHQV-------SVVGSA-KDVNS 170 (567)
Q Consensus 133 l~~~~~~~~~~~~~~~~~iaHElaHqW-------~~fGnl-~~w~~ 170 (567)
+|++..+.....-.+-.+|+|||.|-. |.-||+ +||++
T Consensus 509 ff~~~~p~a~nyG~iG~vIgHEi~HgFD~~G~~~D~~Gnl~~WWt~ 554 (699)
T 3zuk_A 509 FFDPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLVDWWTD 554 (699)
T ss_dssp TCCTTSCHHHHHHTHHHHHHHHHHHTTSTTGGGBCTTSCBCCCSCH
T ss_pred CCCCccchHHHhHHHHHHHHHHHHHHhhhhcceeCCCCCccCCCCH
Confidence 466666666667778899999999965 345677 88886
No 15
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A*
Probab=63.45 E-value=3.8 Score=45.33 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=27.9
Q ss_pred ccCCCCCchhhHHHHHHHHHHHhhhccc-------ccCCc-ccccc
Q psy7254 133 LYDEQETSASGHNWVAVVVAHELAHQVS-------VVGSA-KDVNS 170 (567)
Q Consensus 133 l~~~~~~~~~~~~~~~~~iaHElaHqW~-------~fGnl-~~w~~ 170 (567)
+|++..+.....-.+..+|+|||.|-.| --||+ +||+.
T Consensus 510 ff~~~~~~a~nyg~iG~vigHEi~H~FD~~G~~~D~~Gn~~~wwt~ 555 (696)
T 1r1h_A 510 FFSAQQSNSLNYGGIGMVIGHEITHGFDDNGRNFNKDGDLVDWWTQ 555 (696)
T ss_dssp TCCTTSCHHHHHHTHHHHHHHHHHGGGSTTTTSBCTTSCBCCCSCH
T ss_pred ccCccccHHHHhhHHHHHHHHHHHHHhhhhhheECCCCCccCCCCH
Confidence 4566656566667788999999999753 34666 88887
No 16
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0
Probab=60.55 E-value=4.6 Score=44.39 Aligned_cols=38 Identities=26% Similarity=0.322 Sum_probs=27.8
Q ss_pred ccCCCCCchhhHHHHHHHHHHHhhhcccc-------cCCc-ccccc
Q psy7254 133 LYDEQETSASGHNWVAVVVAHELAHQVSV-------VGSA-KDVNS 170 (567)
Q Consensus 133 l~~~~~~~~~~~~~~~~~iaHElaHqW~~-------fGnl-~~w~~ 170 (567)
+|++..+.....-.+-.+|+|||.|..|- -||+ +||++
T Consensus 487 ff~~~~p~a~nyg~iG~vigHEi~H~FD~~G~~~D~~Gn~~~wWt~ 532 (670)
T 3dwb_A 487 FYTRSSPKALNFGGIGVVVGHELTHAFDDQGREYDKDGNLRPWWKN 532 (670)
T ss_dssp TCCTTSCHHHHHHTHHHHHHHHHHHTTSTTGGGBCTTSCBSCCSCH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhhccCcccceECCCCCccCCCCH
Confidence 45666555666667888999999998643 4566 88877
No 17
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=56.32 E-value=10 Score=34.88 Aligned_cols=17 Identities=35% Similarity=0.571 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
..+.++|||++|.. |--
T Consensus 135 ~~a~~~AHElGHnl---G~~ 151 (214)
T 1r55_A 135 GAAATMAHEIGHSL---GLS 151 (214)
T ss_dssp HHHHHHHHHHHHHT---TCC
T ss_pred HHHHHHHHHHHHhc---CCc
Confidence 45789999999994 754
No 18
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=54.61 E-value=16 Score=33.16 Aligned_cols=17 Identities=53% Similarity=0.798 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
..+.++|||++|+ ||--
T Consensus 134 ~~a~~~AHElGH~---lG~~ 150 (202)
T 1yp1_A 134 LMAVVMAHELGHN---LGML 150 (202)
T ss_dssp HHHHHHHHHHHHH---TTCC
T ss_pred HHHHHHHHHHHHh---cCCC
Confidence 3678999999999 5754
No 19
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=54.52 E-value=8.9 Score=36.42 Aligned_cols=16 Identities=44% Similarity=0.551 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhhhcc
Q psy7254 144 HNWVAVVVAHELAHQV 159 (567)
Q Consensus 144 ~~~~~~~iaHElaHqW 159 (567)
...++.|||||++|-=
T Consensus 97 ~~ELaaVLaHElgH~~ 112 (253)
T 3c37_A 97 ETELAGVLAHEINHAV 112 (253)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4678899999999987
No 20
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=52.77 E-value=2.9 Score=35.47 Aligned_cols=37 Identities=19% Similarity=0.121 Sum_probs=24.7
Q ss_pred cceecccccccCCCCCchhhHHHHHHHHHHHhhhcccccCCc
Q psy7254 124 LITYRETSILYDEQETSASGHNWVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 124 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW~~fGnl 165 (567)
+++||...+-+-. +...-...+..++.||+||. ||.|
T Consensus 68 I~lYR~pi~~~~~--~~eeL~~~V~~tvvHEiaHh---fe~l 104 (130)
T 2ejq_A 68 IALYYGSFLEVAG--EGFDWEAEVWETMLHELRHH---LESL 104 (130)
T ss_dssp EEEEHHHHHHHCC--TTCCHHHHHHHHHHHHHHHH---HHHH
T ss_pred EEEehHHHHHHhC--ChhhHHHHHHHHHHHHhHHH---HHhh
Confidence 5667766443332 22345667899999999999 5555
No 21
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=51.67 E-value=22 Score=32.30 Aligned_cols=17 Identities=59% Similarity=1.058 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
..+.++|||++|. ||--
T Consensus 135 ~~a~~~AHElGH~---lG~~ 151 (202)
T 2w15_A 135 WVAVTMAHELGHN---LGIH 151 (202)
T ss_dssp HHHHHHHHHHHHH---TTCC
T ss_pred HHHHHHHHHHhhh---cCCc
Confidence 4678999999999 4653
No 22
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=50.37 E-value=21 Score=32.24 Aligned_cols=17 Identities=47% Similarity=0.831 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
..+.++|||++|+. |--
T Consensus 132 ~~a~~~AHElGH~l---G~~ 148 (197)
T 1bud_A 132 LVAITLAHEMAHNL---GVS 148 (197)
T ss_dssp HHHHHHHHHHHHHT---TCC
T ss_pred HHHHHHHHHHhhhc---CCc
Confidence 46789999999994 653
No 23
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=47.29 E-value=26 Score=36.08 Aligned_cols=18 Identities=39% Similarity=0.737 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhhhcccccCCc
Q psy7254 145 NWVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 145 ~~~~~~iaHElaHqW~~fGnl 165 (567)
..++.++||||+|++ |-.
T Consensus 144 ~~~a~t~AHElGHnl---G~~ 161 (427)
T 2ero_A 144 HLVAIAMAHEMGHNL---GMD 161 (427)
T ss_dssp HHHHHHHHHHHHHHT---TCC
T ss_pred hHHHHHHHHHHHHhc---CCc
Confidence 456789999999995 654
No 24
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=45.56 E-value=25 Score=34.22 Aligned_cols=93 Identities=20% Similarity=0.282 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCchhhhh--c--ccceecccccccCCCCCchhhHHHHHHHHHHH
Q psy7254 79 AKFALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFGTGAMEN--W--GLITYRETSILYDEQETSASGHNWVAVVVAHE 154 (567)
Q Consensus 79 ~~~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~~game~--~--gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 154 (567)
+.-|.-.+.++.+||.+.|| .-|+.. .++..--+.. ..+| | .-++|.+-.-.+.|. . -..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id~-~l~~~Vhyg~-~y~NAfWdG~~M~fGDG~~~~~p~-~-------~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLTH-KLYMKVHYGR-SVENAYWDGTAMLFGDGATMFYPL-V-------SLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSSS-CEEEEESCTT-TCCCEEECSSCEEECCCCSSBSCS-C-------CHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCCC-ceEEEEecCC-CccCcEecCcEEEeeCCCcccccc-c-------ccceeeec
Confidence 45566677899999999999 567652 3333221211 2222 2 123444322111111 1 24789999
Q ss_pred hhhcccccCCc---cccccccccccCccccCchhhhhhhHh
Q psy7254 155 LAHQVSVVGSA---KDVNSVLWKKQSNVKMNDHDVDDVAFL 192 (567)
Q Consensus 155 laHqW~~fGnl---~~w~~~~WL~~~~~~~~Egf~a~y~~~ 192 (567)
++|-- .-.. ....+.-=| |||| +..+..
T Consensus 142 ~tHGV--t~~~agL~y~~eSGaL-------nEs~-SDifG~ 172 (301)
T 1u4g_A 142 VSHGF--TEQNSGLIYRGQSGGM-------NEAF-SDMAGE 172 (301)
T ss_dssp HHHHH--HHTTTCCCSSHHHHHH-------HHHH-HHHHHH
T ss_pred cccce--eccccCccccCCccch-------hHHH-HHHHHH
Confidence 99998 4432 111110114 9999 877763
No 25
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=43.85 E-value=18 Score=32.89 Aligned_cols=17 Identities=41% Similarity=0.718 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
..+.++|||++|. ||--
T Consensus 135 ~~a~~~AHElGHn---lG~~ 151 (202)
T 1atl_A 135 LMGVTMAHELGHN---LGME 151 (202)
T ss_dssp HHHHHHHHHHHHH---TTCC
T ss_pred eeEEEehhhhccc---cCce
Confidence 4678999999999 4754
No 26
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=43.51 E-value=18 Score=32.71 Aligned_cols=14 Identities=50% Similarity=0.793 Sum_probs=12.0
Q ss_pred HHHHHHHHHhhhcc
Q psy7254 146 WVAVVVAHELAHQV 159 (567)
Q Consensus 146 ~~~~~iaHElaHqW 159 (567)
..+.++|||++|+.
T Consensus 134 ~~a~~~AHElGH~l 147 (197)
T 1qua_A 134 LMAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 36789999999994
No 27
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=40.33 E-value=20 Score=32.61 Aligned_cols=17 Identities=47% Similarity=0.749 Sum_probs=13.8
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
..+.++|||++|. ||--
T Consensus 137 ~~a~~~AHElGH~---lG~~ 153 (203)
T 1kuf_A 137 MVAVTMTHELGHN---LGME 153 (203)
T ss_dssp HHHHHHHHHHHHH---TTCC
T ss_pred hhHHHHHHHhhhh---cCCC
Confidence 4678999999999 4754
No 28
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=38.63 E-value=20 Score=36.85 Aligned_cols=18 Identities=44% Similarity=0.603 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhhhcccccCCc
Q psy7254 145 NWVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 145 ~~~~~~iaHElaHqW~~fGnl 165 (567)
..++.++||||+|++ |-.
T Consensus 137 ~~~a~t~AHElGHnl---Gm~ 154 (427)
T 2e3x_A 137 FKTAVIMAHELSHNL---GMY 154 (427)
T ss_dssp HHHHHHHHHHHHHTT---TCC
T ss_pred ceeeeehHHHHHHhh---CCc
Confidence 456789999999994 754
No 29
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=36.60 E-value=22 Score=39.40 Aligned_cols=36 Identities=11% Similarity=0.142 Sum_probs=25.0
Q ss_pred HHHHHHHHhhhcccccCC--c-cccc---------cccccccCccccCchhhhhhhHhh
Q psy7254 147 VAVVVAHELAHQVSVVGS--A-KDVN---------SVLWKKQSNVKMNDHDVDDVAFLT 193 (567)
Q Consensus 147 ~~~~iaHElaHqW~~fGn--l-~~w~---------~~~WL~~~~~~~~Egf~a~y~~~~ 193 (567)
+..++.||++|.- =|- . ..|. - .|+ .||| |.|++.-
T Consensus 422 Lee~f~HEytHyL--dgRy~~~G~f~~~~~y~~~~~-vW~-------~EG~-AEY~s~~ 469 (785)
T 2y3u_A 422 LEELFRHEYTHYL--QARYLVDGLWGQGPFYEKNRL-TWF-------DEGT-AEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHH--HHHHTSCSSTTSSGGGTTTCS-HHH-------HHHH-HHHHTTB
T ss_pred ecccccchhhhcc--ccccccccccccCcccccCCC-cee-------hhhH-HHHHhcC
Confidence 3457799999986 331 1 2232 4 788 9999 9999753
No 30
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=34.47 E-value=26 Score=35.86 Aligned_cols=18 Identities=44% Similarity=0.678 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhhhcccccCCc
Q psy7254 145 NWVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 145 ~~~~~~iaHElaHqW~~fGnl 165 (567)
..++.++||||+|.+ |-.
T Consensus 135 ~~~a~t~AHElGHnl---G~~ 152 (419)
T 2dw0_A 135 LVVAVIMAHEMGHNL---GIN 152 (419)
T ss_dssp HHHHHHHHHHHHHHT---TCC
T ss_pred hhhhhhHHHHHHHHc---CCc
Confidence 456789999999994 754
No 31
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=33.79 E-value=57 Score=33.10 Aligned_cols=18 Identities=39% Similarity=0.654 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhhhcccccCCc
Q psy7254 145 NWVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 145 ~~~~~~iaHElaHqW~~fGnl 165 (567)
...+.++||||+|. ||-.
T Consensus 137 ~~~a~t~AHElGHn---lGm~ 154 (397)
T 3k7n_A 137 SLVASTITHELGHN---LGIH 154 (397)
T ss_dssp HHHHHHHHHHHHHH---TTCC
T ss_pred chhhhhHHHHHHHH---cCCc
Confidence 35678999999999 5753
No 32
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=33.05 E-value=45 Score=34.15 Aligned_cols=18 Identities=39% Similarity=0.713 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhhhcccccCCc
Q psy7254 145 NWVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 145 ~~~~~~iaHElaHqW~~fGnl 165 (567)
..++.++||||+|. ||-.
T Consensus 142 ~~~a~t~AHElGHn---lGm~ 159 (422)
T 3k7l_A 142 RMVAITMAHEMGHN---LGMN 159 (422)
T ss_dssp HHHHHHHHHHHHHH---TTCC
T ss_pred hhhhHHHHHHHHHH---cCCc
Confidence 45678999999999 5754
No 33
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=31.82 E-value=65 Score=31.30 Aligned_cols=71 Identities=18% Similarity=0.245 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCC---chhhhhcccceecccccccCCCCCchhhHHHHHHHHHHHh
Q psy7254 79 AKFALNTSTHMMDFYEEFFGVPYPLPKQDLIAIPDFG---TGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 155 (567)
Q Consensus 79 ~~~~l~~~~~~l~~~e~~fg~~YP~~k~d~v~~p~~~---~game~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 155 (567)
+..|.-.+.++.+||.++|| .=|+. ..++..-.+. ..|.=+..-++|++-.-.+.|.. -..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~~--------slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPLV--------SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCSC--------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCccccccc--------ccchhhhhh
Confidence 45666677899999999999 55665 2333211111 01211222445554332122211 146899999
Q ss_pred hhcc
Q psy7254 156 AHQV 159 (567)
Q Consensus 156 aHqW 159 (567)
.|--
T Consensus 144 tHGv 147 (306)
T 3nqx_A 144 SHGF 147 (306)
T ss_dssp HHHH
T ss_pred cccc
Confidence 9987
No 34
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=31.75 E-value=21 Score=29.39 Aligned_cols=36 Identities=33% Similarity=0.328 Sum_probs=23.9
Q ss_pred cccceecccccccCCCCCchhhHHHHHHHHHHHhhhcc
Q psy7254 122 WGLITYRETSILYDEQETSASGHNWVAVVVAHELAHQV 159 (567)
Q Consensus 122 ~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 159 (567)
.-+++||....-.- .+...-...+..++.||+||..
T Consensus 67 ~rI~lYR~Pi~~~~--~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 67 DRIIIYRNTICALC--ETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEEEHHHHHHTC--SSHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEehHHHHHHh--CChhHHHHHHHHHHHHHHHHHc
Confidence 34777776644322 2333456678899999999994
No 35
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=29.41 E-value=96 Score=30.25 Aligned_cols=75 Identities=20% Similarity=0.189 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCCC--CcceeecCCCC---chhhhhcccceecccc-cccCCCCCchhhHHHHHHH
Q psy7254 77 PQAKFALNTSTHMMDFYEEFFGVPYPLP--KQDLIAIPDFG---TGAMENWGLITYRETS-ILYDEQETSASGHNWVAVV 150 (567)
Q Consensus 77 ~~~~~~l~~~~~~l~~~e~~fg~~YP~~--k~d~v~~p~~~---~game~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~ 150 (567)
..+..|...+.++.+||.+.|| .=+++ -..++..=-+. ..|.=+...++|.+-. ..+.|-. .-..+
T Consensus 68 ~aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~~-------~slDV 139 (316)
T 3dnz_A 68 APAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLS-------GGIDV 139 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCGG-------GCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCccccccc-------ccccc
Confidence 3446777888999999999999 55664 23332211111 1122122244555421 1112211 11468
Q ss_pred HHHHhhhcc
Q psy7254 151 VAHELAHQV 159 (567)
Q Consensus 151 iaHElaHqW 159 (567)
++||+.|--
T Consensus 140 v~HE~tHgv 148 (316)
T 3dnz_A 140 VAHELTHAV 148 (316)
T ss_dssp HHHHHHHHH
T ss_pred eeeeecccc
Confidence 999999987
No 36
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=28.93 E-value=83 Score=30.52 Aligned_cols=74 Identities=24% Similarity=0.292 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeec---C-CCCchhhhhcccceecccc-cccCCCCCchhhHHHHHH
Q psy7254 77 PQAKFALNTSTHMMDFYEEFFGVPYPLPK--QDLIAI---P-DFGTGAMENWGLITYRETS-ILYDEQETSASGHNWVAV 149 (567)
Q Consensus 77 ~~~~~~l~~~~~~l~~~e~~fg~~YP~~k--~d~v~~---p-~~~~game~~gli~~~e~~-ll~~~~~~~~~~~~~~~~ 149 (567)
..+..|...+.++.+||.+.|| .=+++. ..++.. . .+ ..|.=+...++|.+-. ..+.|-. .-..
T Consensus 61 ~aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y-~NAfW~g~~m~fGDGdg~~f~~~~-------~slD 131 (304)
T 4ger_A 61 PAGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRY-NNAFWNGSQMTYGDGDGSTFIAFS-------GDPD 131 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSC-CCEEECSSCEEEECCCSSSBCCGG-------GSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCc-cCceecCCEEEEeCCCCccccccc-------cccc
Confidence 3456677788999999999999 556642 333221 1 11 1121122244555421 1111211 1146
Q ss_pred HHHHHhhhcc
Q psy7254 150 VVAHELAHQV 159 (567)
Q Consensus 150 ~iaHElaHqW 159 (567)
+++||++|--
T Consensus 132 VvaHEltHGV 141 (304)
T 4ger_A 132 VVGHELTHGV 141 (304)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhcccccc
Confidence 8999999987
No 37
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=27.80 E-value=57 Score=32.70 Aligned_cols=16 Identities=44% Similarity=0.690 Sum_probs=13.3
Q ss_pred HHHHHHHHhhhcccccCCc
Q psy7254 147 VAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 147 ~~~~iaHElaHqW~~fGnl 165 (567)
++.++||||+|. ||-.
T Consensus 143 ~a~~~AHElGHn---lGm~ 158 (378)
T 2rjq_A 143 AAFTVAHEIGHL---LGLS 158 (378)
T ss_dssp HHHHHHHHHHHH---TTCC
T ss_pred hhhhhhhhhhhh---cCcc
Confidence 578999999999 5754
No 38
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=27.56 E-value=23 Score=32.54 Aligned_cols=16 Identities=44% Similarity=0.690 Sum_probs=13.1
Q ss_pred HHHHHHHHhhhcccccCCc
Q psy7254 147 VAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 147 ~~~~iaHElaHqW~~fGnl 165 (567)
.+.++|||++|. ||--
T Consensus 141 ~a~~~AHElGHn---lG~~ 156 (217)
T 3b8z_A 141 AAFTVAHEIGHL---LGLS 156 (217)
T ss_dssp HHHHHHHHHHHH---TTCC
T ss_pred hhhhhHhhhhhh---cCCc
Confidence 578999999999 5753
No 39
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=27.38 E-value=3.3e+02 Score=24.98 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=65.9
Q ss_pred ChhhHHHHHHHHHH-HHHc--C----CcchhhhhHhhhhh-hcCCCchhHHHHHHHHHHHHhhccCCchhHHHH-HHHHH
Q psy7254 384 SPADRASLIDDAFT-LSRA--G----LVNATVPLELSTYL-LKEKDYVPWATALEHFQHWSTSLSEASPYRLFE-QYVKK 454 (567)
Q Consensus 384 ~~~~Ra~LidD~f~-la~a--g----~l~~~~~l~l~~yL-~~E~~y~~W~~a~~~l~~~~~~~~~~~~~~~~~-~~~~~ 454 (567)
.-.+|..-+..+.. ++.. . ..+|..+++.+.-. .++.+..+-..+.+.+..+...+.. ..|. .|...
T Consensus 29 ~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~----~~f~~~y~~~ 104 (249)
T 2qk1_A 29 KWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT----PGFSKDYVSL 104 (249)
T ss_dssp SHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT----TTSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc----ccccHHHHHH
Confidence 46788888888888 7642 1 33567777665544 4899998888888888888876430 2477 89999
Q ss_pred HHHHHHhhcccccCCchHHHHHHHHHHHHHHhc
Q psy7254 455 LLTPISHHIGWEDTGSHLEKLMRSDILAAAVLV 487 (567)
Q Consensus 455 l~~~~~~~lg~~~~~s~~~~~lR~~il~~ac~~ 487 (567)
++.+++++++-.. .......+..+..++...
T Consensus 105 llp~ll~~l~dkk--~~V~~aa~~al~~i~~~~ 135 (249)
T 2qk1_A 105 VFTPLLDRTKEKK--PSVIEAIRKALLTICKYY 135 (249)
T ss_dssp HHHHHHHGGGCCC--HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCC--HHHHHHHHHHHHHHHHHc
Confidence 9999999997322 233344555555554444
No 40
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=26.64 E-value=43 Score=32.41 Aligned_cols=16 Identities=38% Similarity=0.480 Sum_probs=13.2
Q ss_pred HHHHHHHHhhhcccccCCc
Q psy7254 147 VAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 147 ~~~~iaHElaHqW~~fGnl 165 (567)
.+.++||||+|. ||-.
T Consensus 143 ~a~t~AHElGHn---lG~~ 158 (300)
T 2v4b_A 143 AAFTTAHELGHV---FNMP 158 (300)
T ss_dssp HHHHHHHHHHHH---TTCC
T ss_pred ceehhhhhhhhh---cCCc
Confidence 578999999999 4754
No 41
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=26.52 E-value=1.1e+02 Score=29.61 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy7254 79 AKFALNTSTHMMDFYEEFFGVPYPLP 104 (567)
Q Consensus 79 ~~~~l~~~~~~l~~~e~~fg~~YP~~ 104 (567)
+-.|...+.++.+||.+.|| .=+++
T Consensus 67 avdA~~~~~~t~d~y~~~~g-r~sid 91 (301)
T 1bqb_A 67 GVDANYYAKQTYDYYKNTFG-RESYD 91 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTT
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCC
Confidence 34566678899999999999 55664
No 42
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=26.31 E-value=80 Score=28.57 Aligned_cols=17 Identities=41% Similarity=0.630 Sum_probs=13.4
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
.++.++|||++|. ||-.
T Consensus 132 ~~a~~~AHElGH~---lG~~ 148 (208)
T 4dd8_A 132 GVACTMAHEMGHN---LGMD 148 (208)
T ss_dssp HHHHHHHHHHHHH---TTCC
T ss_pred HHHHHHHHHHHHH---cCCc
Confidence 4578999999999 5743
No 43
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=25.93 E-value=26 Score=33.04 Aligned_cols=16 Identities=38% Similarity=0.713 Sum_probs=13.1
Q ss_pred HHHHHHHHhhhcccccCCc
Q psy7254 147 VAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 147 ~~~~iaHElaHqW~~fGnl 165 (567)
.+.++||||+|.+ |-.
T Consensus 182 ~a~~~AHElGHnl---G~~ 197 (257)
T 2ddf_A 182 ADLVTTHELGHNF---GAE 197 (257)
T ss_dssp HHHHHHHHHHHHT---TCC
T ss_pred eeeeeeeehhhhc---Ccc
Confidence 5688999999995 754
No 44
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=25.31 E-value=72 Score=33.51 Aligned_cols=15 Identities=40% Similarity=0.682 Sum_probs=12.5
Q ss_pred HHHHHHHHHHhhhcc
Q psy7254 145 NWVAVVVAHELAHQV 159 (567)
Q Consensus 145 ~~~~~~iaHElaHqW 159 (567)
...+.++||||+|..
T Consensus 132 ~~~A~t~AHELGHnL 146 (510)
T 3g5c_A 132 DLMAVTLAQSLAHNI 146 (510)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHc
Confidence 356889999999984
No 45
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=24.05 E-value=3.4e+02 Score=23.26 Aligned_cols=61 Identities=20% Similarity=0.048 Sum_probs=31.1
Q ss_pred EEEeecCHHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHcCCcchhhhhHhhhhhhcCCCchhHHHHH
Q psy7254 359 FYRVTYDDHLWDALIQALKTNHEVFSPADRASLIDDAFTLSRAGLVNATVPLELSTYLLKEKDYVPWATAL 429 (567)
Q Consensus 359 yyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~LidD~f~la~ag~l~~~~~l~l~~yL~~E~~y~~W~~a~ 429 (567)
++--..+......+++.|.+. ++..|..-+.- |...|.- ...=.|++.|..+ +..+-..+.
T Consensus 6 ~~~~~~~~~~~~~~i~~L~~~----~~~vr~~A~~~---L~~~~~~--~~~~~L~~~l~~~-~~~vr~~a~ 66 (201)
T 3ltj_A 6 HHHHHTDPEKVEMYIKNLQDD----SYYVRRAAAYA---LGKIGDE--RAVEPLIKALKDE-DAWVRRAAA 66 (201)
T ss_dssp -CCCCCCHHHHHHHHHHTTCS----CHHHHHHHHHH---HHHHCCG--GGHHHHHHHTTCS-SHHHHHHHH
T ss_pred ccccccCCcchHHHHHHhcCC----CHHHHHHHHHH---HHhcCCh--hHHHHHHHHHcCC-CHHHHHHHH
Confidence 344456777888888888543 35666655433 3433331 2222344555443 444444444
No 46
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=21.00 E-value=35 Score=33.33 Aligned_cols=17 Identities=29% Similarity=0.313 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhhcccccCCc
Q psy7254 146 WVAVVVAHELAHQVSVVGSA 165 (567)
Q Consensus 146 ~~~~~iaHElaHqW~~fGnl 165 (567)
..+.++||||+|. ||-.
T Consensus 142 ~~a~t~AHElGHn---lGm~ 158 (316)
T 2rjp_A 142 QSAFTAAHQLGHV---FNML 158 (316)
T ss_dssp THHHHHHHHHHHH---TTCC
T ss_pred hHHHHHHHHHHhh---cCcc
Confidence 3578999999999 5754
Done!