BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7255
(289 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CFQ3|AQR_MOUSE Intron-binding protein aquarius OS=Mus musculus GN=Aqr PE=2 SV=2
Length = 1481
Score = 190 bits (483), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 156/288 (54%), Gaps = 63/288 (21%)
Query: 5 KQGSAPTVYQINKDRITEVAGKYWAPHSEGSHLPYDANIVTQIYRTEIIGCNFAIRRIMM 64
K+ APTV QIN + +T++A KYWAPH + P+D ++ +IY EI+ FAIR+IM+
Sbjct: 8 KKIVAPTVSQINAEFVTQLACKYWAPHIKKKS-PFDIKVIEEIYEKEIVKSRFAIRKIML 66
Query: 65 LEFSQYLENYLWPNYKTGEASHEHLMSIVIMTNEKFRERVNAWETFRKHPEHFPGLFHHV 124
LEFSQYLENYLW NY +S +LMSI M NEKFRE V AWETF+K P+HFP F +
Sbjct: 67 LEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCI 126
Query: 125 LETTLKSSAVLMS--EQTALVVFLNHCFNSMNSTRVPSERKLLLKVLGASRDPWILQRTA 182
L+ L + S EQT L++FL+HCFNS+
Sbjct: 127 LKAALAETDGEFSLHEQTLLLLFLDHCFNSL----------------------------- 157
Query: 183 HPRPDQTFGVSVHVDITAAGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHESRREQELRN 242
VD+ + +Q L S+ +G L +R E EL+
Sbjct: 158 ------------EVDLIRSQVQQL-----ISLPMWMG-----------LQPARLELELKK 189
Query: 243 VPKWRKYWKLIMKKD---NPEEKEKLEWERKYLHKIMLKFLNVVENIP 287
PK RK+W LI K D +PE +E+ ER++L +++ KF++V+++IP
Sbjct: 190 TPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSRLIQKFISVLKSIP 237
>sp|O60306|AQR_HUMAN Intron-binding protein aquarius OS=Homo sapiens GN=AQR PE=1 SV=4
Length = 1485
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 155/288 (53%), Gaps = 63/288 (21%)
Query: 5 KQGSAPTVYQINKDRITEVAGKYWAPHSEGSHLPYDANIVTQIYRTEIIGCNFAIRRIMM 64
K+ APTV QIN + +T++A KYWAPH + P+D ++ IY EI+ FAIR+IM+
Sbjct: 8 KKIVAPTVSQINAEFVTQLACKYWAPHIKKKS-PFDIKVIEDIYEKEIVKSRFAIRKIML 66
Query: 65 LEFSQYLENYLWPNYKTGEASHEHLMSIVIMTNEKFRERVNAWETFRKHPEHFPGLFHHV 124
LEFSQYLENYLW NY +S +LMSI M NEKFRE V AWE F+K P+HFP F H+
Sbjct: 67 LEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFPFFFKHI 126
Query: 125 LETTLKSSAVLMS--EQTALVVFLNHCFNSMNSTRVPSERKLLLKVLGASRDPWILQRTA 182
L+ L + S EQT L++FL+HCFNS+
Sbjct: 127 LKAALAETDGEFSLHEQTVLLLFLDHCFNSL----------------------------- 157
Query: 183 HPRPDQTFGVSVHVDITAAGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHESRREQELRN 242
VD+ + +Q L S+ +G L +R E EL+
Sbjct: 158 ------------EVDLIRSQVQQL-----ISLPMWMG-----------LQLARLELELKK 189
Query: 243 VPKWRKYWKLIMKKD---NPEEKEKLEWERKYLHKIMLKFLNVVENIP 287
PK RK+W LI K D +PE +E+ ER++L +++ KF++V++++P
Sbjct: 190 TPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVP 237
>sp|C1A6P1|RS12_GEMAT 30S ribosomal protein S12 OS=Gemmatimonas aurantiaca (strain T-27 /
DSM 14586 / JCM 11422 / NBRC 100505) GN=rpsL PE=3 SV=1
Length = 134
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 10 PTVYQINKDRITEVAGKYWAPHSEGSHLPYDANIVTQIYRTEIIGCNFAIRRIMMLEFSQ 69
PT+ Q+ + +V K AP + + P+ + T++Y T N A+R++ + +
Sbjct: 2 PTINQLVRRARKDVVEKSKAPALKSN--PFKRGVCTRVYTTTPKKPNSALRKVARIRLTN 59
Query: 70 YLENYLWPNYKTGEASHEHLMSIVIMTNEKFRERVNAWETFRKHPEHFPGLFHHVLETTL 129
LE Y GE + SIV++ + ++ PG+ +H++ TL
Sbjct: 60 QLE---VTAYIPGEGHNLQEHSIVLVRGGRVKD--------------LPGVRYHIVRGTL 102
Query: 130 KSSAVLMSEQT 140
+S V Q+
Sbjct: 103 DASGVNGRNQS 113
>sp|Q3ZZM8|RS12_DEHSC 30S ribosomal protein S12 OS=Dehalococcoides sp. (strain CBDB1)
GN=rpsL PE=3 SV=1
Length = 144
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 29/142 (20%)
Query: 10 PTVYQINKDRITEVAGKYWAPH------------SEGSHLPYDANIVTQIYRTEIIGCNF 57
PTV Q+ + T A KY AP + G P + TQ+ T N
Sbjct: 2 PTVNQLVRKGRTSAAKKYKAPALHYSFNSLRNKVAFGDGSPQKRGVCTQVKTTTPKKPNS 61
Query: 58 AIRRIMMLEFSQYLENYLWPNYKTGEASHEHLMSIVIMTNEKFRERVNAWETFRKHPEHF 117
A+R+I + S ++E Y GE + S+V++ + +
Sbjct: 62 ALRKIARVRLSNHME---VTAYIPGEGHNLQEHSVVLIRGGRVPD--------------L 104
Query: 118 PGLFHHVLETTLKSSAVLMSEQ 139
PG+ +H++ TL ++ V +Q
Sbjct: 105 PGVRYHIIRGTLDTAGVANRQQ 126
>sp|A5FS00|RS12_DEHSB 30S ribosomal protein S12 OS=Dehalococcoides sp. (strain BAV1)
GN=rpsL PE=3 SV=1
Length = 144
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 29/142 (20%)
Query: 10 PTVYQINKDRITEVAGKYWAPH------------SEGSHLPYDANIVTQIYRTEIIGCNF 57
PTV Q+ + T A KY AP + G P + TQ+ T N
Sbjct: 2 PTVNQLVRKGRTSAAKKYKAPALHYSFNSLRNKVAFGDGSPQKRGVCTQVKTTTPKKPNS 61
Query: 58 AIRRIMMLEFSQYLENYLWPNYKTGEASHEHLMSIVIMTNEKFRERVNAWETFRKHPEHF 117
A+R+I + S ++E Y GE + S+V++ + +
Sbjct: 62 ALRKIARVRLSNHME---VTAYIPGEGHNLQEHSVVLIRGGRVPD--------------L 104
Query: 118 PGLFHHVLETTLKSSAVLMSEQ 139
PG+ +H++ TL ++ V +Q
Sbjct: 105 PGVRYHIIRGTLDTAGVANRQQ 126
>sp|B4S5N2|RS12_PROA2 30S ribosomal protein S12 OS=Prosthecochloris aestuarii (strain DSM
271 / SK 413) GN=rpsL PE=3 SV=1
Length = 128
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 10 PTVYQINKDRITEVAGKYWAPHSEGSHLPYDANIVTQIYRTEIIGCNFAIRRIMMLEFSQ 69
PT+ Q+ + T A K +P E P + T++Y T N A+R++ + S
Sbjct: 2 PTIQQLIRRGRTTKASKTASPALE--KCPQKRGVCTRVYTTTPKKPNSALRKVARVRLSN 59
Query: 70 YLENYLWPNYKTGEASHEHLMSIVIMTNEKFRERVNAWETFRKHPEHFPGLFHHVLETTL 129
+E Y GE + SIV++ + ++ PG+ +H++ +L
Sbjct: 60 KIE---VTAYIPGEGHNLQEHSIVLIRGGRVKD--------------LPGVRYHIVRGSL 102
Query: 130 KSSAVLMSEQ 139
+S V Q
Sbjct: 103 DTSGVADRRQ 112
>sp|Q9RWJ0|ARLY_DEIRA Argininosuccinate lyase OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=argH PE=3 SV=2
Length = 471
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 17 KDRITEVAGKYWAPHSEGSHLPYDANIVTQIYRTEIIGCNFAIRRIMMLEFSQYLEN-YL 75
+DRI VAGK S + D + T+ ++ A+RR+M+ E ++L+N +
Sbjct: 99 RDRIGPVAGKLHTARSRNDQVAVDFRLFTKEAALDLAEQTRALRRVMLAEAEKHLQNEVI 158
Query: 76 WPNY 79
P Y
Sbjct: 159 LPGY 162
>sp|P15144|AMPN_HUMAN Aminopeptidase N OS=Homo sapiens GN=ANPEP PE=1 SV=4
Length = 967
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 22/101 (21%)
Query: 154 NSTRVPSERKLLLKVLGASRDPWILQR----TAHP----RPDQTFGV-SVHVDITAAGLQ 204
N+T V +E L L S++ WIL R T +P + D T + S+ ++ GL
Sbjct: 818 NATLV-NEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLV 876
Query: 205 ------------NLFGNGTFSMGALIGVVTSHFSAPYDLHE 233
N +G G+FS LI VT FS Y+L +
Sbjct: 877 WDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQ 917
>sp|P97449|AMPN_MOUSE Aminopeptidase N OS=Mus musculus GN=Anpep PE=1 SV=4
Length = 966
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 22/101 (21%)
Query: 154 NSTRVPSERKLLLKVLGASRDPWILQR----TAHP---RPDQTFGVSVHVDITAAG---- 202
N+T V +E L L S+D WIL R T +P R T + + AG
Sbjct: 817 NATLV-NEADKLRSALACSKDVWILNRYLSYTLNPDYIRKQDTTSTIISIASNVAGHPLV 875
Query: 203 ----------LQNLFGNGTFSMGALIGVVTSHFSAPYDLHE 233
L +G G+FS LI VT FS+ ++L +
Sbjct: 876 WDFVRSNWKKLFENYGGGSFSFANLIQGVTRRFSSEFELQQ 916
>sp|P38290|UBS1_YEAST Ubiquitin-conjugating enzyme suppressor 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBS1 PE=4
SV=1
Length = 277
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 30/117 (25%)
Query: 101 RERVNAWETFRKHPEHFPGLFH-HVLETTLKSSAVLMSE-QTALVVFLNHCFNSMNSTRV 158
R+ + W+ F +HPE GLFH ++ L V+M E +T+L V+
Sbjct: 7 RKLLKDWKYFMRHPEKTQGLFHVRPHDSDLHLWHVVMYEPRTSLEVY------------- 53
Query: 159 PSERKLLLKVLGASRDPWILQRTAHPRPDQTFGVSVHVDIT--------AAGLQNLF 207
LLL + G +DP+I+ + P+ F ++ V +T GLQ+L
Sbjct: 54 -----LLLYIGGNDQDPYIIMKCL--SPNCCFPINRTVSMTHLNYLLLKDLGLQDLL 103
>sp|P15541|AMPN_RABIT Aminopeptidase N OS=Oryctolagus cuniculus GN=ANPEP PE=1 SV=4
Length = 966
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 22/101 (21%)
Query: 154 NSTRVPSERKLLLKVLGASRDPWILQR----TAHP----RPDQT----------FGVSVH 195
N+T V +E L L S + WIL R T +P R D T G ++
Sbjct: 817 NATLV-NEADKLRSALACSNEVWILNRYLSYTLNPDYIRRQDATSTINSIASNVIGQTLV 875
Query: 196 VDITAAGLQNLF---GNGTFSMGALIGVVTSHFSAPYDLHE 233
D + + LF G G+FS LI VT FS Y+L +
Sbjct: 876 WDFVQSNWKKLFEDFGGGSFSFANLIRAVTRRFSTEYELQQ 916
>sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1
Length = 524
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 61 RIMMLEFSQYLENYLWPNYKTGEASHEHLMSIVIMTNEKFRERVNAWETFRKHPEH 116
R++ EF ++ ++ W + E+S +++ V + + VN W T HP+H
Sbjct: 246 RVVYTEFDEFTQDAEWLVSQKNESSFDYVEGFVFVNGA---DPVNGWPTVPLHPDH 298
>sp|P15145|AMPN_PIG Aminopeptidase N OS=Sus scrofa GN=ANPEP PE=1 SV=4
Length = 963
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 27/148 (18%)
Query: 107 WETFRKHPEHFPGLFHHVLETTLKSSAVLMSEQTALVVFLNHCFNSMNSTRVPSERKLLL 166
++ + PE+ P H L +T+ +A+ Q + + + ++ +E L
Sbjct: 773 FDQWMSDPENNP--IHPNLRSTIYCNAIAQGGQDQW----DFAWGQLQQAQLVNEADKLR 826
Query: 167 KVLGASRDPWILQR----TAHP----RPDQT----------FGVSVHVDITAAGLQNLF- 207
L S + W+L R T +P + D T G + D + + LF
Sbjct: 827 SALACSNEVWLLNRYLGYTLNPDLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQ 886
Query: 208 --GNGTFSMGALIGVVTSHFSAPYDLHE 233
G G+FS LI VT FS+ ++L +
Sbjct: 887 DYGGGSFSFSNLIQGVTRRFSSEFELQQ 914
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,135,735
Number of Sequences: 539616
Number of extensions: 4427051
Number of successful extensions: 11001
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 10982
Number of HSP's gapped (non-prelim): 23
length of query: 289
length of database: 191,569,459
effective HSP length: 116
effective length of query: 173
effective length of database: 128,974,003
effective search space: 22312502519
effective search space used: 22312502519
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)