Query psy7262
Match_columns 840
No_of_seqs 508 out of 3501
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 22:09:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7262.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7262hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0100|consensus 100.0 7.3E-76 1.6E-80 606.2 38.2 411 334-828 35-447 (663)
2 PTZ00009 heat shock 70 kDa pro 100.0 5.3E-65 1.1E-69 603.1 49.2 418 334-832 3-423 (653)
3 PTZ00186 heat shock 70 kDa pre 100.0 1E-64 2.2E-69 595.2 50.1 413 336-839 28-446 (657)
4 PRK13410 molecular chaperone D 100.0 2.7E-63 5.8E-68 586.0 49.5 411 335-837 2-419 (668)
5 PTZ00400 DnaK-type molecular c 100.0 3.3E-63 7.1E-68 587.2 47.5 406 336-833 42-454 (663)
6 PRK13411 molecular chaperone D 100.0 6.6E-63 1.4E-67 584.4 49.2 408 336-835 3-417 (653)
7 PRK00290 dnaK molecular chaper 100.0 4.2E-62 9.1E-67 578.4 50.7 403 336-832 3-412 (627)
8 PLN03184 chloroplast Hsp70; Pr 100.0 3E-62 6.6E-67 579.1 49.3 409 336-836 40-455 (673)
9 TIGR02350 prok_dnaK chaperone 100.0 1.8E-61 3.9E-66 571.4 49.7 403 337-832 2-410 (595)
10 TIGR01991 HscA Fe-S protein as 100.0 2.2E-61 4.8E-66 566.8 49.2 401 337-836 1-404 (599)
11 CHL00094 dnaK heat shock prote 100.0 1.6E-60 3.4E-65 563.2 49.7 409 336-836 3-418 (621)
12 PRK05183 hscA chaperone protei 100.0 9.6E-61 2.1E-65 562.5 45.8 399 336-836 20-420 (616)
13 PF00012 HSP70: Hsp70 protein; 100.0 5.1E-61 1.1E-65 572.5 43.6 413 337-834 1-418 (602)
14 KOG0101|consensus 100.0 5.6E-60 1.2E-64 529.4 33.3 424 333-837 5-430 (620)
15 COG0443 DnaK Molecular chapero 100.0 4.3E-58 9.4E-63 531.9 37.2 390 336-835 6-398 (579)
16 PRK01433 hscA chaperone protei 100.0 3.6E-57 7.8E-62 527.4 41.9 377 336-835 20-397 (595)
17 KOG0102|consensus 100.0 3.1E-58 6.7E-63 493.5 28.5 414 333-837 25-444 (640)
18 KOG0103|consensus 100.0 1.9E-57 4.2E-62 501.9 33.2 426 336-840 2-440 (727)
19 KOG0104|consensus 100.0 4.9E-51 1.1E-55 451.0 35.7 414 335-819 22-440 (902)
20 PRK11678 putative chaperone; P 100.0 1.7E-49 3.7E-54 447.8 38.0 343 337-791 2-448 (450)
21 KOG0100|consensus 100.0 1.2E-38 2.6E-43 330.3 23.3 210 1-210 440-650 (663)
22 PRK13928 rod shape-determining 100.0 9.1E-33 2E-37 304.8 32.6 307 338-792 6-325 (336)
23 PRK13929 rod-share determining 100.0 1.8E-32 4E-37 301.5 31.6 306 337-788 6-324 (335)
24 PRK13927 rod shape-determining 100.0 8.2E-31 1.8E-35 289.5 30.6 306 337-791 7-325 (334)
25 TIGR00904 mreB cell shape dete 100.0 5.8E-30 1.3E-34 282.3 31.7 305 338-790 5-327 (333)
26 PRK13930 rod shape-determining 100.0 1.2E-29 2.6E-34 280.5 30.9 306 337-790 10-328 (335)
27 KOG0101|consensus 100.0 7.2E-29 1.6E-33 279.2 19.0 202 1-204 414-615 (620)
28 PTZ00009 heat shock 70 kDa pro 100.0 9.9E-28 2.1E-32 285.1 26.3 204 1-204 412-615 (653)
29 PF06723 MreB_Mbl: MreB/Mbl pr 100.0 3.3E-28 7.2E-33 261.6 19.2 305 337-788 3-319 (326)
30 PRK13411 molecular chaperone D 99.9 1.7E-26 3.7E-31 274.1 26.8 203 1-207 403-605 (653)
31 PTZ00400 DnaK-type molecular c 99.9 2.9E-26 6.3E-31 272.3 24.9 213 1-219 442-654 (663)
32 PRK13410 molecular chaperone D 99.9 2.7E-26 5.8E-31 271.8 23.0 202 1-203 403-607 (668)
33 PLN03184 chloroplast Hsp70; Pr 99.9 6.8E-26 1.5E-30 269.3 25.3 206 1-212 440-645 (673)
34 COG1077 MreB Actin-like ATPase 99.9 5.6E-25 1.2E-29 226.9 24.1 311 336-793 7-334 (342)
35 PTZ00186 heat shock 70 kDa pre 99.9 3.7E-25 8E-30 260.9 24.6 208 1-213 428-635 (657)
36 PRK00290 dnaK molecular chaper 99.9 5E-25 1.1E-29 261.9 24.3 198 1-204 401-598 (627)
37 CHL00094 dnaK heat shock prote 99.9 5.5E-25 1.2E-29 260.7 23.7 198 1-204 403-600 (621)
38 TIGR02529 EutJ ethanolamine ut 99.9 4.7E-25 1E-29 230.3 19.3 200 447-786 39-238 (239)
39 TIGR02350 prok_dnaK chaperone 99.9 1.6E-24 3.4E-29 256.8 24.3 196 1-202 399-594 (595)
40 PRK05183 hscA chaperone protei 99.9 8.9E-24 1.9E-28 249.4 23.9 197 1-203 405-601 (616)
41 TIGR01991 HscA Fe-S protein as 99.9 1.4E-23 3.1E-28 247.2 24.4 197 1-203 389-585 (599)
42 PRK01433 hscA chaperone protei 99.9 2.4E-23 5.2E-28 243.6 25.1 190 1-196 383-572 (595)
43 KOG0102|consensus 99.9 2.8E-23 6.1E-28 224.6 17.9 202 1-205 428-629 (640)
44 PRK15080 ethanolamine utilizat 99.9 7.2E-22 1.6E-26 210.0 23.4 201 448-788 67-267 (267)
45 PF00012 HSP70: Hsp70 protein; 99.8 5.9E-20 1.3E-24 219.4 24.8 197 1-203 405-602 (602)
46 COG0443 DnaK Molecular chapero 99.8 1.2E-18 2.7E-23 202.9 21.4 195 1-203 384-578 (579)
47 TIGR01174 ftsA cell division p 99.8 4.8E-18 1E-22 190.3 23.8 195 496-787 158-371 (371)
48 PRK09472 ftsA cell division pr 99.8 2.7E-17 5.9E-22 186.4 27.9 197 497-790 167-388 (420)
49 KOG0103|consensus 99.8 5.8E-18 1.3E-22 189.2 19.7 199 2-204 416-649 (727)
50 COG0849 ftsA Cell division ATP 99.7 3.1E-14 6.7E-19 157.4 27.2 209 483-791 156-381 (418)
51 KOG0104|consensus 99.5 1.8E-13 3.8E-18 154.0 15.4 252 3-288 452-796 (902)
52 cd00012 ACTIN Actin; An ubiqui 99.5 4.8E-13 1E-17 150.2 15.2 217 483-790 96-347 (371)
53 smart00268 ACTIN Actin. ACTIN 99.4 3.5E-12 7.6E-17 143.3 14.2 236 448-790 75-347 (373)
54 PRK13917 plasmid segregation p 99.3 1.4E-10 3.1E-15 127.9 23.4 213 483-793 113-339 (344)
55 COG4820 EutJ Ethanolamine util 99.3 1.1E-12 2.5E-17 126.0 5.7 195 452-786 76-270 (277)
56 TIGR03739 PRTRC_D PRTRC system 99.2 9.9E-10 2.1E-14 120.5 19.3 207 483-788 103-318 (320)
57 PTZ00280 Actin-related protein 99.1 2.6E-09 5.6E-14 121.5 20.5 205 483-765 103-336 (414)
58 PF00022 Actin: Actin; InterP 99.0 4.9E-09 1.1E-13 118.8 17.9 224 483-789 95-366 (393)
59 PF06406 StbA: StbA protein; 98.9 9.1E-09 2E-13 112.7 14.7 69 711-785 246-316 (318)
60 PTZ00004 actin-2; Provisional 98.9 3.1E-08 6.7E-13 111.4 17.5 214 483-789 102-351 (378)
61 PTZ00452 actin; Provisional 98.9 6.5E-08 1.4E-12 108.3 19.7 214 483-789 101-348 (375)
62 PTZ00281 actin; Provisional 98.9 2.7E-08 5.9E-13 111.6 16.1 216 483-789 102-349 (376)
63 PTZ00466 actin-like protein; P 98.8 2.1E-07 4.6E-12 104.3 19.4 216 483-789 107-353 (380)
64 TIGR01175 pilM type IV pilus a 98.8 1.4E-07 3.1E-12 105.0 16.6 184 495-788 142-347 (348)
65 PF11104 PilM_2: Type IV pilus 98.6 5.2E-07 1.1E-11 100.0 13.8 190 485-788 129-339 (340)
66 PF07520 SrfB: Virulence facto 98.5 3.9E-05 8.4E-10 92.1 28.6 85 703-792 730-836 (1002)
67 TIGR03192 benz_CoA_bzdQ benzoy 98.2 0.00012 2.7E-09 77.6 19.1 47 743-790 241-288 (293)
68 KOG0679|consensus 98.1 0.00016 3.5E-09 77.3 18.9 85 448-558 86-171 (426)
69 COG5277 Actin and related prot 98.1 0.00012 2.5E-09 83.1 17.1 67 483-559 107-174 (444)
70 TIGR00241 CoA_E_activ CoA-subs 98.0 8.6E-05 1.9E-09 78.5 13.3 67 714-786 180-247 (248)
71 COG4457 SrfB Uncharacterized p 97.8 0.0096 2.1E-07 67.8 25.6 66 443-508 423-489 (1014)
72 PRK10719 eutA reactivating fac 97.7 0.00018 3.9E-09 80.4 10.6 82 483-584 89-182 (475)
73 PF08841 DDR: Diol dehydratase 97.6 0.0012 2.6E-08 68.1 13.7 50 739-788 273-329 (332)
74 COG4972 PilM Tfp pilus assembl 97.5 0.0064 1.4E-07 64.5 18.6 161 498-765 151-311 (354)
75 COG1924 Activator of 2-hydroxy 97.1 0.0092 2E-07 64.6 13.9 45 745-790 346-390 (396)
76 TIGR02261 benz_CoA_red_D benzo 97.0 0.01 2.2E-07 62.3 13.5 67 719-788 192-262 (262)
77 TIGR03286 methan_mark_15 putat 96.9 0.004 8.8E-08 68.9 9.8 46 743-789 357-402 (404)
78 TIGR02259 benz_CoA_red_A benzo 96.9 0.013 2.9E-07 64.2 13.2 46 743-788 383-432 (432)
79 PF01968 Hydantoinase_A: Hydan 96.6 0.0029 6.3E-08 68.4 5.7 69 715-786 215-283 (290)
80 KOG0676|consensus 96.6 0.014 2.9E-07 64.3 10.9 50 740-789 289-345 (372)
81 PF02782 FGGY_C: FGGY family o 96.3 0.0065 1.4E-07 61.7 5.9 76 713-790 120-196 (198)
82 KOG0797|consensus 95.6 0.099 2.1E-06 58.4 11.5 125 442-591 195-320 (618)
83 TIGR01315 5C_CHO_kinase FGGY-f 95.4 0.05 1.1E-06 64.4 9.0 83 709-793 411-493 (541)
84 PLN02669 xylulokinase 95.2 0.054 1.2E-06 64.1 8.6 72 716-790 421-492 (556)
85 PRK15027 xylulokinase; Provisi 95.2 0.046 1E-06 63.8 7.9 52 741-793 386-437 (484)
86 KOG0680|consensus 95.1 0.66 1.4E-05 49.3 14.8 39 741-779 317-362 (400)
87 PRK13317 pantothenate kinase; 94.7 0.062 1.3E-06 57.5 6.4 49 741-789 222-273 (277)
88 PRK00047 glpK glycerol kinase; 94.3 0.11 2.3E-06 61.0 8.0 77 715-793 376-453 (498)
89 COG1069 AraB Ribulose kinase [ 94.3 0.5 1.1E-05 53.9 12.7 83 706-793 396-481 (544)
90 PRK04123 ribulokinase; Provisi 94.2 0.11 2.3E-06 61.8 7.7 76 716-793 413-489 (548)
91 PTZ00294 glycerol kinase-like 94.2 0.13 2.8E-06 60.4 8.2 76 716-793 380-456 (504)
92 TIGR02628 fuculo_kin_coli L-fu 94.2 0.11 2.4E-06 60.2 7.6 75 715-793 366-443 (465)
93 TIGR01234 L-ribulokinase L-rib 94.1 0.13 2.8E-06 60.9 8.1 76 716-793 410-486 (536)
94 TIGR01311 glycerol_kin glycero 94.1 0.11 2.5E-06 60.7 7.5 76 716-793 373-449 (493)
95 PRK10331 L-fuculokinase; Provi 94.0 0.13 2.8E-06 59.9 7.7 80 709-793 359-439 (470)
96 TIGR01312 XylB D-xylulose kina 94.0 0.15 3.2E-06 59.5 8.2 51 741-793 390-440 (481)
97 KOG2517|consensus 94.0 0.18 4E-06 57.6 8.6 77 716-794 388-465 (516)
98 PF06277 EutA: Ethanolamine ut 93.6 0.77 1.7E-05 52.0 12.3 75 484-562 87-164 (473)
99 TIGR01314 gntK_FGGY gluconate 93.4 0.19 4.1E-06 59.1 7.8 51 741-793 401-451 (505)
100 TIGR02627 rhamnulo_kin rhamnul 93.4 0.18 3.9E-06 58.4 7.6 50 741-793 387-436 (454)
101 PLN02295 glycerol kinase 93.4 0.2 4.3E-06 58.9 7.9 77 715-793 380-462 (512)
102 PRK10939 autoinducer-2 (AI-2) 93.0 0.24 5.2E-06 58.4 7.8 51 741-793 409-459 (520)
103 PRK10640 rhaB rhamnulokinase; 92.7 0.27 5.8E-06 57.2 7.6 50 741-793 375-424 (471)
104 KOG2531|consensus 92.5 0.37 8.1E-06 53.4 7.7 55 734-790 435-489 (545)
105 PLN02666 5-oxoprolinase 91.9 2.8 6.2E-05 54.0 15.6 77 708-787 454-531 (1275)
106 COG1070 XylB Sugar (pentulose 91.1 0.93 2E-05 53.2 9.7 51 740-791 400-450 (502)
107 KOG0681|consensus 91.1 0.21 4.5E-06 56.4 3.9 49 742-790 559-614 (645)
108 PF01869 BcrAD_BadFG: BadF/Bad 88.9 1.1 2.3E-05 48.0 7.3 71 715-788 197-271 (271)
109 PF14450 FtsA: Cell division p 87.6 1.2 2.5E-05 41.4 5.7 19 543-561 1-19 (120)
110 KOG0677|consensus 87.5 2.2 4.8E-05 44.0 7.8 221 483-793 102-364 (389)
111 COG4819 EutA Ethanolamine util 84.1 20 0.00043 38.7 13.0 23 539-561 143-165 (473)
112 TIGR00555 panK_eukar pantothen 83.4 2.4 5.3E-05 45.3 6.3 47 740-786 229-278 (279)
113 PRK11031 guanosine pentaphosph 82.3 6.2 0.00013 46.2 9.7 58 497-559 93-150 (496)
114 COG0554 GlpK Glycerol kinase [ 82.1 4.3 9.3E-05 46.0 7.7 86 706-793 365-452 (499)
115 PF07318 DUF1464: Protein of u 82.0 25 0.00055 38.5 13.4 74 717-795 240-320 (343)
116 COG0248 GppA Exopolyphosphatas 80.9 6.3 0.00014 45.7 8.9 57 498-559 91-147 (492)
117 PRK10854 exopolyphosphatase; P 80.6 6.4 0.00014 46.3 9.1 58 498-560 99-156 (513)
118 PF02541 Ppx-GppA: Ppx/GppA ph 79.0 3.9 8.5E-05 44.1 6.2 55 501-560 77-131 (285)
119 PF03702 UPF0075: Uncharacteri 76.9 7.9 0.00017 43.2 7.8 70 716-790 262-337 (364)
120 PRK03011 butyrate kinase; Prov 76.4 11 0.00025 41.9 9.0 69 716-787 273-344 (358)
121 PRK11678 putative chaperone; P 73.0 3.6 7.7E-05 47.4 4.1 25 602-626 207-231 (450)
122 TIGR03706 exo_poly_only exopol 69.8 21 0.00047 38.7 9.1 54 499-559 89-143 (300)
123 PRK09585 anmK anhydro-N-acetyl 69.7 30 0.00065 38.6 10.1 47 742-789 287-337 (365)
124 COG0145 HyuA N-methylhydantoin 69.3 11 0.00023 45.6 7.0 43 513-561 256-298 (674)
125 TIGR03281 methan_mark_12 putat 64.5 27 0.00057 37.6 7.9 50 742-794 263-315 (326)
126 TIGR00143 hypF [NiFe] hydrogen 62.5 12 0.00026 45.6 5.8 49 741-789 658-711 (711)
127 PRK10719 eutA reactivating fac 61.0 5.1 0.00011 45.6 2.1 38 605-647 147-184 (475)
128 PF02543 CmcH_NodU: Carbamoylt 60.8 41 0.00088 37.6 9.2 82 707-793 132-216 (360)
129 PRK00976 hypothetical protein; 59.7 47 0.001 36.3 9.0 50 741-793 263-314 (326)
130 KOG1385|consensus 58.0 62 0.0014 36.2 9.6 131 448-589 117-260 (453)
131 PRK09604 UGMP family protein; 54.7 3.3E+02 0.0072 30.0 19.0 53 741-793 254-311 (332)
132 COG3426 Butyrate kinase [Energ 51.8 53 0.0011 34.9 7.4 49 739-787 294-345 (358)
133 TIGR03123 one_C_unchar_1 proba 50.4 11 0.00025 41.0 2.6 21 541-561 128-148 (318)
134 KOG0681|consensus 49.5 1.7E+02 0.0036 34.1 11.3 72 483-562 117-189 (645)
135 PF14574 DUF4445: Domain of un 48.7 38 0.00083 38.4 6.5 85 703-788 290-375 (412)
136 COG0533 QRI7 Metal-dependent p 43.6 51 0.0011 36.2 6.1 41 720-765 245-285 (342)
137 PTZ00340 O-sialoglycoprotein e 42.9 46 0.001 36.9 5.8 55 720-780 247-303 (345)
138 PF10458 Val_tRNA-synt_C: Valy 40.1 1.2E+02 0.0026 24.8 6.5 49 122-170 5-53 (66)
139 PRK09605 bifunctional UGMP fam 39.2 86 0.0019 37.1 7.9 53 741-793 245-302 (535)
140 COG2192 Predicted carbamoyl tr 39.0 5.3E+02 0.011 30.3 13.5 81 708-793 256-338 (555)
141 TIGR03723 bact_gcp putative gl 37.7 76 0.0016 34.7 6.6 45 741-785 259-308 (314)
142 TIGR02707 butyr_kinase butyrat 37.6 1.1E+02 0.0024 34.1 7.9 67 716-785 271-340 (351)
143 PRK05082 N-acetylmannosamine k 36.6 1.1E+02 0.0023 32.9 7.5 49 741-789 233-287 (291)
144 PRK13310 N-acetyl-D-glucosamin 36.5 98 0.0021 33.4 7.3 48 741-788 245-300 (303)
145 COG5026 Hexokinase [Carbohydra 34.5 4E+02 0.0088 30.3 11.3 52 499-559 185-238 (466)
146 PRK13928 rod shape-determining 33.1 42 0.00092 37.0 3.8 19 604-622 147-165 (336)
147 PF05957 DUF883: Bacterial pro 33.0 2.4E+02 0.0053 24.6 7.9 67 104-176 5-73 (94)
148 cd06007 R3H_DEXH_helicase R3H 32.5 1.6E+02 0.0035 23.6 5.9 30 484-513 16-45 (59)
149 cd02640 R3H_NRF R3H domain of 31.7 1.9E+02 0.0042 23.2 6.2 31 484-514 17-47 (60)
150 TIGR00744 ROK_glcA_fam ROK fam 31.6 1.3E+02 0.0028 32.6 7.3 49 741-789 251-309 (318)
151 PRK00180 acetate kinase A/prop 31.4 1.1E+02 0.0023 34.8 6.4 47 716-765 301-348 (402)
152 PF08006 DUF1700: Protein of u 28.8 1.2E+02 0.0027 30.0 5.9 57 134-199 4-62 (181)
153 PRK13927 rod shape-determining 28.0 62 0.0013 35.5 4.0 20 603-622 147-166 (334)
154 cd02639 R3H_RRM R3H domain of 27.9 1.4E+02 0.003 24.0 4.8 31 483-513 16-46 (60)
155 KOG2708|consensus 27.9 7E+02 0.015 25.9 12.4 75 707-786 224-300 (336)
156 cd02641 R3H_Smubp-2_like R3H d 27.8 2.1E+02 0.0045 22.9 5.9 30 485-514 18-47 (60)
157 COG4012 Uncharacterized protei 27.1 1.2E+02 0.0027 31.8 5.5 57 489-559 186-245 (342)
158 PLN02377 3-ketoacyl-CoA syntha 26.8 1.8E+02 0.0039 34.1 7.5 54 713-766 165-219 (502)
159 TIGR00904 mreB cell shape dete 26.3 73 0.0016 35.1 4.1 21 603-623 149-169 (333)
160 cd04036 C2_cPLA2 C2 domain pre 25.5 3.5E+02 0.0076 24.4 8.0 68 9-81 45-115 (119)
161 PRK09557 fructokinase; Reviewe 25.5 2E+02 0.0042 31.1 7.3 48 741-788 244-299 (301)
162 KOG1939|consensus 25.3 1.1E+02 0.0023 37.1 5.2 23 330-352 300-323 (1247)
163 PRK09698 D-allose kinase; Prov 25.2 1.9E+02 0.0041 31.2 7.1 49 741-789 236-295 (302)
164 COG4012 Uncharacterized protei 25.1 55 0.0012 34.3 2.6 18 542-559 2-19 (342)
165 PRK07058 acetate kinase; Provi 25.0 1.6E+02 0.0035 33.2 6.4 47 715-765 296-343 (396)
166 TIGR00016 ackA acetate kinase. 24.7 1.7E+02 0.0037 33.1 6.6 47 716-765 305-352 (404)
167 PF13941 MutL: MutL protein 24.3 34 0.00073 39.3 1.0 27 739-765 383-410 (457)
168 COG2377 Predicted molecular ch 24.0 4.2E+02 0.009 29.5 9.1 53 739-791 288-344 (371)
169 PF08392 FAE1_CUT1_RppA: FAE1/ 23.5 1.6E+02 0.0036 31.6 5.8 43 723-765 86-129 (290)
170 PRK14878 UGMP family protein; 23.4 99 0.0021 34.0 4.4 25 741-765 241-265 (323)
171 TIGR01319 glmL_fam conserved h 23.1 39 0.00085 38.6 1.2 44 734-777 382-431 (463)
172 PLN03170 chalcone synthase; Pr 23.0 2.6E+02 0.0056 31.8 7.8 49 719-767 105-154 (401)
173 PF08735 DUF1786: Putative pyr 22.4 1.5E+02 0.0033 31.2 5.2 69 483-559 115-185 (254)
174 PF09921 DUF2153: Uncharacteri 21.8 6.5E+02 0.014 23.4 11.7 102 107-208 14-119 (126)
175 PLN03173 chalcone synthase; Pr 21.7 2.7E+02 0.0059 31.5 7.6 48 719-766 101-149 (391)
176 TIGR00329 gcp_kae1 metallohydr 21.6 74 0.0016 34.7 2.9 37 724-765 246-282 (305)
177 TIGR01069 mutS2 MutS2 family p 21.5 8.2E+02 0.018 30.5 12.2 44 100-143 493-537 (771)
178 PF02970 TBCA: Tubulin binding 21.1 3.8E+02 0.0083 23.4 6.7 22 152-173 55-76 (90)
179 PRK13929 rod-share determining 20.8 1E+02 0.0022 34.1 3.9 20 603-622 149-168 (335)
180 KOG2196|consensus 20.8 7.5E+02 0.016 25.8 9.5 38 154-195 213-250 (254)
181 PF15188 CCDC-167: Coiled-coil 20.4 5.6E+02 0.012 22.2 7.3 35 150-192 30-64 (85)
182 PRK00039 ruvC Holliday junctio 20.4 54 0.0012 32.2 1.4 18 335-352 2-20 (164)
183 COG4575 ElaB Uncharacterized c 20.2 6.3E+02 0.014 22.8 7.8 19 126-144 39-57 (104)
184 PLN02854 3-ketoacyl-CoA syntha 20.2 1.7E+02 0.0036 34.5 5.5 54 713-766 181-235 (521)
No 1
>KOG0100|consensus
Probab=100.00 E-value=7.3e-76 Score=606.17 Aligned_cols=411 Identities=66% Similarity=1.013 Sum_probs=391.0
Q ss_pred cCCCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 334 FIPSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 334 ~~~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
..-+|||| |||||||+++.+|+++||.|++|+|.+||.|+|.+++|++|+.|..++..||++++.+.|||+|+.+++..
T Consensus 35 ~gtvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~ 114 (663)
T KOG0100|consen 35 LGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKS 114 (663)
T ss_pred cceEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccchhhhhhHhhcccccCcccceechHHHhCcccCChh
Confidence 45689999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCeeEeecCCcceEEEEEc-CcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCC
Q psy7262 413 VQADMKHWPFEVVSDGGKPKIKVEYK-GEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPA 491 (840)
Q Consensus 413 ~~~~~~~~p~~~~~~~~~~~~~v~~~-~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa 491 (840)
+|.+.+.+||.+++.++++++.|... |+.+.++|+++.+|+|..+++.|+.++|..+ .++|+|||+
T Consensus 115 vq~Dik~~Pfkvv~k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv-------------~~AVvTvPA 181 (663)
T KOG0100|consen 115 VQKDIKFLPFKVVNKDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKV-------------THAVVTVPA 181 (663)
T ss_pred hhhhhhcCceEEEcCCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcc-------------cceEEecch
Confidence 99999999999999999999999987 5689999999999999999999999999876 899999999
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCc
Q psy7262 492 YFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGER 571 (840)
Q Consensus 492 ~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~ 571 (840)
||++.||++..+|-..||++.+++++||+|||++|+++... .
T Consensus 182 YFNDAQrQATKDAGtIAgLnV~RIiNePTaAAIAYGLDKk~------g-------------------------------- 223 (663)
T KOG0100|consen 182 YFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKD------G-------------------------------- 223 (663)
T ss_pred hcchHHHhhhcccceeccceEEEeecCccHHHHHhcccccC------C--------------------------------
Confidence 99999999999999999999999999999999999887652 2
Q ss_pred eeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHH
Q psy7262 572 NVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 651 (840)
Q Consensus 572 ~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 651 (840)
+++++|||+||||||+|++.+.++.|++++..++.++||++||++.++|
T Consensus 224 -------------------------------EknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~rvm~~ 272 (663)
T KOG0100|consen 224 -------------------------------EKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRVMEY 272 (663)
T ss_pred -------------------------------cceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHHHHHH
Confidence 3346777777777777777888999999999999999999999999999
Q ss_pred HHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHH
Q psy7262 652 FVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKS 731 (840)
Q Consensus 652 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~ 731 (840)
+.+.++++.+.++..+.++..+|+++||+||++||.+.+..+.|+++++|.|++-++||+.|+++--+++...+.+++.+
T Consensus 273 fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kv 352 (663)
T KOG0100|consen 273 FIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKV 352 (663)
T ss_pred HHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccce
Q psy7262 732 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLS 811 (840)
Q Consensus 732 l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~s 811 (840)
|+++++...+|+.|+||||++|||-||+.|+++|.+.+.....||++|||+|||.+|..++| .....++++.|++|++
T Consensus 353 l~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsG--ee~t~divLLDv~pLt 430 (663)
T KOG0100|consen 353 LEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSG--EEDTGDIVLLDVNPLT 430 (663)
T ss_pred HhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhccccc--ccCcCcEEEEeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999 5677899999999999
Q ss_pred eEEEeeCCeEEEccccC
Q psy7262 812 LGIETAGGVSYSQSQLG 828 (840)
Q Consensus 812 ~gi~~~~~~~~~~~~~~ 828 (840)
+|||+.||+|-..++.+
T Consensus 431 lGIETvGGVMTklI~RN 447 (663)
T KOG0100|consen 431 LGIETVGGVMTKLIPRN 447 (663)
T ss_pred ceeeeecceeeccccCC
Confidence 99999999999888654
No 2
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=100.00 E-value=5.3e-65 Score=603.05 Aligned_cols=418 Identities=75% Similarity=1.095 Sum_probs=378.4
Q ss_pred cCCCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 334 FIPSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 334 ~~~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
..+++||| |||||+||++++|.+++|+|..|+|++||+|+|.++++++|..|..++..+|.++++++||+||+.+.++.
T Consensus 3 ~~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~ 82 (653)
T PTZ00009 3 KGPAIGIDLGTTYSCVGVWKNENVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDSV 82 (653)
T ss_pred cccEEEEEeCcccEEEEEEeCCceEEEECCCCCccCCcEEEECCCCEEEcHHHHHhhhhCcccEEhhhHHHhCCCCCchh
Confidence 34578999 99999999999999999999999999999999998899999999999999999999999999999999988
Q ss_pred HHhhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCC
Q psy7262 413 VQADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPA 491 (840)
Q Consensus 413 ~~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa 491 (840)
++...+.+||.+.. .++...+.+.+.++...++|++|++++|++|++.|+.+++..+ .++|||||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~~v-------------~~~VItVPa 149 (653)
T PTZ00009 83 VQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMVLQKMKEIAEAYLGKQV-------------KDAVVTVPA 149 (653)
T ss_pred HhhhhhcCceEEEEcCCCceEEEEEeCCceEEECHHHHHHHHHHHHHHHHHHHhCCCc-------------ceeEEEeCC
Confidence 88888889998764 6677788888888888999999999999999999999988755 899999999
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCc
Q psy7262 492 YFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGER 571 (840)
Q Consensus 492 ~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~ 571 (840)
+|++.||+++++||+.|||+.+++++||+|||++|+..... ..+.++||+|+||||+|+|++++.
T Consensus 150 ~f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~~-----~~~~~vlv~D~GggT~dvsv~~~~---------- 214 (653)
T PTZ00009 150 YFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKG-----DGEKNVLIFDLGGGTFDVSLLTIE---------- 214 (653)
T ss_pred CCCHHHHHHHHHHHHHcCCceeEEecchHHHHHHHhhhccC-----CCCCEEEEEECCCCeEEEEEEEEe----------
Confidence 99999999999999999999999999999999999875432 135678888888888888887653
Q ss_pred eeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHH
Q psy7262 572 NVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 651 (840)
Q Consensus 572 ~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 651 (840)
++.+++++..++..+||.+||.+|+++
T Consensus 215 -----------------------------------------------------~~~~~v~a~~gd~~lGG~d~D~~l~~~ 241 (653)
T PTZ00009 215 -----------------------------------------------------DGIFEVKATAGDTHLGGEDFDNRLVEF 241 (653)
T ss_pred -----------------------------------------------------CCeEEEEEecCCCCCChHHHHHHHHHH
Confidence 235677888888999999999999999
Q ss_pred HHHHHHHhcc-CCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHH
Q psy7262 652 FVQEFKRKYK-KDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEK 730 (840)
Q Consensus 652 l~~~~~~~~~-~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~ 730 (840)
+.+++.+++. .++..+++.+.+|+.+||++|+.||.+..+.+.++.+.++.++.+.|||++|+++++|+++++.++|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~~~~~i~i~~~~~~~d~~~~itR~~fe~l~~~l~~~~~~~i~~ 321 (653)
T PTZ00009 242 CVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYNVTISRARFEELCGDYFRNTLQPVEK 321 (653)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCCceEEEEEEeccCCceEEEEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987663 566678899999999999999999999999999998888889999999999999999999999999999
Q ss_pred HHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccc
Q psy7262 731 SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPL 810 (840)
Q Consensus 731 ~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~ 810 (840)
+|+++++...+|+.|+||||+||+|+|++.|++.|++..+....||++|||+|||++|+++++...+.++++.++|++|+
T Consensus 322 ~L~~a~~~~~~i~~ViLvGGssriP~v~~~i~~~f~~~~~~~~~npdeaVA~GAa~~aa~ls~~~~~~~~~~~~~dv~p~ 401 (653)
T PTZ00009 322 VLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPL 401 (653)
T ss_pred HHHHcCCCHHHCcEEEEECCCCCChhHHHHHHHHhCCCCCCCCCCcchHHhhhhhhhHHHhcCCccccccceEEEeeccc
Confidence 99999999999999999999999999999999999777788889999999999999999999866678889999999999
Q ss_pred eeEEEeeCCeEEEccccCceEe
Q psy7262 811 SLGIETAGGVSYSQSQLGWLLI 832 (840)
Q Consensus 811 s~gi~~~~~~~~~~~~~~~~~~ 832 (840)
+||+++.++.+.++++.+..++
T Consensus 402 slgi~~~~~~~~~ii~~~t~iP 423 (653)
T PTZ00009 402 SLGLETAGGVMTKLIERNTTIP 423 (653)
T ss_pred ccCccccCCceEEEEeCCCcCC
Confidence 9999999988887775544433
No 3
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=100.00 E-value=1e-64 Score=595.17 Aligned_cols=413 Identities=46% Similarity=0.747 Sum_probs=369.5
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 414 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~~ 414 (840)
.++||| |||||+||++++|.+++|+|..|.+++||+|+|.++++++|..|..+...+|.++++++||+||+.+.+..++
T Consensus 28 ~viGIDLGTTnS~vA~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~lvG~~Ak~~~~~~p~~ti~~~KRliG~~~~d~~v~ 107 (657)
T PTZ00186 28 DVIGVDLGTTYSCVATMDGDKARVLENSEGFRTTPSVVAFKGSEKLVGLAAKRQAITNPQSTFYAVKRLIGRRFEDEHIQ 107 (657)
T ss_pred eEEEEEeCcCeEEEEEEeCCceEEeecCCCCcccceEEEECCCCEEEcHHHHHhhhhCchhHHHHHHHHhccccccHHHH
Confidence 588999 9999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhcccCCeeEeec-CCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCC
Q psy7262 415 ADMKHWPFEVVSD-GGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYF 493 (840)
Q Consensus 415 ~~~~~~p~~~~~~-~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~ 493 (840)
.....+||.+... ++... +.. +.+..++|++|.+++|++|++.|+.++|.++ ..+|||||++|
T Consensus 108 ~~~~~~p~~vv~~~~~~~~--i~~-~~~~~~speeisa~iL~~Lk~~Ae~~lg~~v-------------~~aVITVPayF 171 (657)
T PTZ00186 108 KDIKNVPYKIVRAGNGDAW--VQD-GNGKQYSPSQIGAFVLEKMKETAENFLGHKV-------------SNAVVTCPAYF 171 (657)
T ss_pred HhhccCcEEEEEcCCCceE--EEe-CCCeEEcHHHHHHHHHHHHHHHHHHHhCCcc-------------ceEEEEECCCC
Confidence 8889999998753 33332 222 3357899999999999999999999998765 89999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCcee
Q psy7262 494 NDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNV 573 (840)
Q Consensus 494 ~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~ 573 (840)
++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|++++.
T Consensus 172 ~~~qR~at~~Aa~~AGl~v~rlInEPtAAAlayg~~~~-------~~~~vlV~DlGGGT~DvSil~~~------------ 232 (657)
T PTZ00186 172 NDAQRQATKDAGTIAGLNVIRVVNEPTAAALAYGMDKT-------KDSLIAVYDLGGGTFDISVLEIA------------ 232 (657)
T ss_pred ChHHHHHHHHHHHHcCCCeEEEEcChHHHHHHHhccCC-------CCCEEEEEECCCCeEEEEEEEEe------------
Confidence 99999999999999999999999999999999976542 35678888888888888877643
Q ss_pred EEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHH
Q psy7262 574 LIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 653 (840)
Q Consensus 574 ~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 653 (840)
++.+++++..++..+||.+||.+|++|+.
T Consensus 233 ---------------------------------------------------~g~~~V~at~Gd~~LGG~DfD~~l~~~~~ 261 (657)
T PTZ00186 233 ---------------------------------------------------GGVFEVKATNGDTHLGGEDFDLALSDYIL 261 (657)
T ss_pred ---------------------------------------------------CCEEEEEEecCCCCCCchhHHHHHHHHHH
Confidence 34577888889999999999999999999
Q ss_pred HHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCC----eeeEEEEehHHHHHHHHHHHHHHHHHHH
Q psy7262 654 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEPVE 729 (840)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~e~e~~~~~~i~~i~~~i~ 729 (840)
++|+.+++.++..+++.+.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|+++++|+++++..++.
T Consensus 262 ~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~i~~~~~g~~~~~~~ItR~efe~l~~~l~~r~~~~v~ 341 (657)
T PTZ00186 262 EEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPFITANADGAQHIQMHISRSKFEGITQRLIERSIAPCK 341 (657)
T ss_pred HHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEeeeccCCCCCcceEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 999988887887888999999999999999999999988888765432 3578999999999999999999999999
Q ss_pred HHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEecc
Q psy7262 730 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTP 809 (840)
Q Consensus 730 ~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~ 809 (840)
++|+++++...+|+.|+||||+||+|.|++.|++.| +.......||++|||+|||++|+.+++. ++++.+.|++|
T Consensus 342 ~~L~~a~~~~~dId~VvLVGGssriP~V~~~l~~~f-g~~~~~~~nPdeaVA~GAAi~a~~l~~~----~~~~~l~Dv~p 416 (657)
T PTZ00186 342 QCMKDAGVELKEINDVVLVGGMTRMPKVVEEVKKFF-QKDPFRGVNPDEAVALGAATLGGVLRGD----VKGLVLLDVTP 416 (657)
T ss_pred HHHHHcCCChhhCCEEEEECCcccChHHHHHHHHHh-CCCccccCCCchHHHHhHHHHHHHhccc----cCceEEEeecc
Confidence 999999999999999999999999999999999999 4556678899999999999999999872 46889999999
Q ss_pred ceeEEEeeCCeEEEccccCceEeeeccCCC
Q psy7262 810 LSLGIETAGGVSYSQSQLGWLLIFYVCNPF 839 (840)
Q Consensus 810 ~s~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (840)
++||+++.+|.+.++++.+..++..++..|
T Consensus 417 ~slgie~~~g~~~~iI~rnt~iP~~~~~~f 446 (657)
T PTZ00186 417 LSLGIETLGGVFTRMIPKNTTIPTKKSQTF 446 (657)
T ss_pred ccccceecCCEEEEEEeCCCEeeEEEeecc
Confidence 999999999999999988888887776655
No 4
>PRK13410 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=2.7e-63 Score=585.96 Aligned_cols=411 Identities=47% Similarity=0.758 Sum_probs=362.2
Q ss_pred CCCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEee-CCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 335 IPSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 335 ~~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~-~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
..++||| |||||+||++.+|.+.+|+|..|++++||+|+|. ++++++|..|..++..+|.++++++|++||+++.+
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KRliG~~~~~-- 79 (668)
T PRK13410 2 GRIVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTKDGELLVGQLARRQLVLNPQNTFYNLKRFIGRRYDE-- 79 (668)
T ss_pred CcEEEEEeCCCcEEEEEEECCeEEEEECCCCCccCceEEEEeCCCCEEECHHHHHhhHhCccceehHHhhhhCCCchh--
Confidence 3578999 9999999999999999999999999999999998 56899999999999999999999999999998765
Q ss_pred HHhhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCC
Q psy7262 413 VQADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPA 491 (840)
Q Consensus 413 ~~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa 491 (840)
++.....+||.+.. +++...+.+ ...+..++|++|++++|++|++.|+.++|.++ .++|||||+
T Consensus 80 ~~~~~~~~~~~v~~~~~g~~~i~~--~~~~~~~speel~a~iL~~lk~~ae~~lg~~v-------------~~~VITVPa 144 (668)
T PRK13410 80 LDPESKRVPYTIRRNEQGNVRIKC--PRLEREFAPEELSAMILRKLADDASRYLGEPV-------------TGAVITVPA 144 (668)
T ss_pred hHHhhccCCeEEEECCCCcEEEEE--ecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCc-------------ceEEEEECC
Confidence 34445678998764 344444443 34458899999999999999999999998765 799999999
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCc
Q psy7262 492 YFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGER 571 (840)
Q Consensus 492 ~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~ 571 (840)
+|++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|++++.
T Consensus 145 ~f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlayg~~~~-------~~~~vlV~DlGgGT~Dvsv~~~~---------- 207 (668)
T PRK13410 145 YFNDSQRQATRDAGRIAGLEVERILNEPTAAALAYGLDRS-------SSQTVLVFDLGGGTFDVSLLEVG---------- 207 (668)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEecchHHHHHHhccccC-------CCCEEEEEECCCCeEEEEEEEEc----------
Confidence 9999999999999999999999999999999999977542 45688899999998888887653
Q ss_pred eeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHH
Q psy7262 572 NVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 651 (840)
Q Consensus 572 ~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 651 (840)
++.+++++..++..+||.+||.+|+++
T Consensus 208 -----------------------------------------------------~g~~~V~at~gd~~lGG~dfD~~l~~~ 234 (668)
T PRK13410 208 -----------------------------------------------------NGVFEVKATSGDTQLGGNDFDKRIVDW 234 (668)
T ss_pred -----------------------------------------------------CCeEEEEEeecCCCCChhHHHHHHHHH
Confidence 235677888898999999999999999
Q ss_pred HHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCC----eeeEEEEehHHHHHHHHHHHHHHHHH
Q psy7262 652 FVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEP 727 (840)
Q Consensus 652 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~e~e~~~~~~i~~i~~~ 727 (840)
+.++|..+++.++..+++.+.+|+.+||++|+.||....+.+.++.+..+ .++...|||++|+++++++++++..+
T Consensus 235 l~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~FE~l~~~l~~r~~~~ 314 (668)
T PRK13410 235 LAEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGVSVTDISLPFITATEDGPKHIETRLDRKQFESLCGDLLDRLLRP 314 (668)
T ss_pred HHHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecCCCCCeeEEEEECHHHHHHHHHHHHHHHHHH
Confidence 99999888887887888999999999999999999999888888765432 46788999999999999999999999
Q ss_pred HHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEe
Q psy7262 728 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDV 807 (840)
Q Consensus 728 i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~ 807 (840)
|+++|+++++.+.+|+.|+||||+||+|+|++.|++.| +..+....||++|||+|||++|+++++ .++++.++|+
T Consensus 315 i~~~L~~ag~~~~dId~VvLVGGssRiP~V~~~l~~~f-g~~~~~~~npdeaVA~GAAi~aa~ls~----~~~~~~l~Dv 389 (668)
T PRK13410 315 VKRALKDAGLSPEDIDEVVLVGGSTRMPMVQQLVRTLI-PREPNQNVNPDEVVAVGAAIQAGILAG----ELKDLLLLDV 389 (668)
T ss_pred HHHHHHHcCCChhhCcEEEEECCccccHHHHHHHHHHc-CCCcccCCCCchHHHHhHHHHHHhhcc----cccceeEEee
Confidence 99999999999999999999999999999999999999 566778889999999999999999987 3578999999
Q ss_pred ccceeEEEeeCCeEEEccccCceEeeeccC
Q psy7262 808 TPLSLGIETAGGVSYSQSQLGWLLIFYVCN 837 (840)
Q Consensus 808 ~~~s~gi~~~~~~~~~~~~~~~~~~~~~~~ 837 (840)
+|+++|+++.+|.+.++++.+..++..++.
T Consensus 390 ~p~slgie~~~g~~~~li~rnt~iP~~~~~ 419 (668)
T PRK13410 390 TPLSLGLETIGGVMKKLIPRNTTIPVRRSD 419 (668)
T ss_pred ccccccceecCCeeEEEEeCCCcccccccc
Confidence 999999999999998888776666555543
No 5
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=100.00 E-value=3.3e-63 Score=587.18 Aligned_cols=406 Identities=50% Similarity=0.800 Sum_probs=361.9
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeC-CcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 413 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~-~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~ 413 (840)
+++||| |||||+||++++|.+++|+|..|+|++||+|+|++ +++++|..|..++..+|.++++++|+|||+.+.++.+
T Consensus 42 ~viGIDlGTt~s~va~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~ 121 (663)
T PTZ00400 42 DIVGIDLGTTNSCVAIMEGSQPKVIENSEGMRTTPSVVAFTEDGQRLVGIVAKRQAVTNPENTVFATKRLIGRRYDEDAT 121 (663)
T ss_pred cEEEEEECcccEEEEEEeCCeeEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhHHhCCcceehhhhhhcCCCcCcHHH
Confidence 689999 99999999999999999999999999999999984 5899999999999999999999999999999999888
Q ss_pred HhhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 414 QADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 414 ~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
+.....+||.+.. .++...+. .. +..++|++|++++|++|++.|+.++|..+ .++|||||++
T Consensus 122 ~~~~~~~p~~~~~~~~~~~~~~--~~--~~~~speel~a~iL~~lk~~ae~~lg~~v-------------~~~VITVPa~ 184 (663)
T PTZ00400 122 KKEQKILPYKIVRASNGDAWIE--AQ--GKKYSPSQIGAFVLEKMKETAESYLGRKV-------------KQAVITVPAY 184 (663)
T ss_pred HhhhccCCeEEEecCCCceEEE--EC--CEEECHHHHHHHHHHHHHHHHHHHhCCCC-------------ceEEEEECCC
Confidence 8888899999875 34444443 33 47899999999999999999999998765 8999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|++++.
T Consensus 185 f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAlay~~~~~-------~~~~vlV~DlGgGT~DvSv~~~~----------- 246 (663)
T PTZ00400 185 FNDSQRQATKDAGKIAGLDVLRIINEPTAAALAFGMDKN-------DGKTIAVYDLGGGTFDISILEIL----------- 246 (663)
T ss_pred CCHHHHHHHHHHHHHcCCceEEEeCchHHHHHHhccccC-------CCcEEEEEeCCCCeEEEEEEEec-----------
Confidence 999999999999999999999999999999999976532 46788999999999988887653
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
++.+++++..++..+||.+||.+|++++
T Consensus 247 ----------------------------------------------------~g~~~v~a~~gd~~LGG~d~D~~l~~~l 274 (663)
T PTZ00400 247 ----------------------------------------------------GGVFEVKATNGNTSLGGEDFDQRILNYL 274 (663)
T ss_pred ----------------------------------------------------CCeeEEEecccCCCcCHHHHHHHHHHHH
Confidence 2346677888889999999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCC----eeeEEEEehHHHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEPV 728 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~e~e~~~~~~i~~i~~~i 728 (840)
.++|+.+++.++..+++.+.+|+.+||++|+.||.+..+.+.++.+..+ .++.+.|||++|+++++|+++++.+++
T Consensus 275 ~~~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~efe~l~~~l~~~~~~~i 354 (663)
T PTZ00400 275 IAEFKKQQGIDLKKDKLALQRLREAAETAKIELSSKTQTEINLPFITADQSGPKHLQIKLSRAKLEELTHDLLKKTIEPC 354 (663)
T ss_pred HHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEEEeeccCCCCceEEEEEECHHHHHHHHHHHHHHHHHHH
Confidence 9999988887788888999999999999999999998888888765432 478899999999999999999999999
Q ss_pred HHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEec
Q psy7262 729 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVT 808 (840)
Q Consensus 729 ~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~ 808 (840)
.++|+++++.+.+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+++++ .++++.+.|++
T Consensus 355 ~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f-~~~~~~~~npdeaVA~GAAi~aa~l~~----~~~~~~~~dv~ 429 (663)
T PTZ00400 355 EKCIKDAGVKKDELNDVILVGGMTRMPKVSETVKKIF-GKEPSKGVNPDEAVAMGAAIQAGVLKG----EIKDLLLLDVT 429 (663)
T ss_pred HHHHHHcCCCHHHCcEEEEECCccCChHHHHHHHHHh-CCCcccCCCCccceeeccHHHHHhhcC----CccceEEEecc
Confidence 9999999999999999999999999999999999999 556778899999999999999999987 25788999999
Q ss_pred cceeEEEeeCCeEEEccccCceEee
Q psy7262 809 PLSLGIETAGGVSYSQSQLGWLLIF 833 (840)
Q Consensus 809 ~~s~gi~~~~~~~~~~~~~~~~~~~ 833 (840)
|++||+++.+|.+.++++.+..++.
T Consensus 430 p~slgi~~~~g~~~~ii~~~t~iP~ 454 (663)
T PTZ00400 430 PLSLGIETLGGVFTRLINRNTTIPT 454 (663)
T ss_pred ccceEEEecCCeeEEEEecCccCCc
Confidence 9999999999988877755544433
No 6
>PRK13411 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=6.6e-63 Score=584.42 Aligned_cols=408 Identities=50% Similarity=0.789 Sum_probs=359.4
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeC-CcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 413 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~-~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~ 413 (840)
.++||| |||||+||++.+|.+.+|+|..|+|++||+|+|.+ +++++|..|..+...+|.++++++|||||+.+.+...
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~ 82 (653)
T PRK13411 3 KVIGIDLGTTNSCVAVLEGGKPIVIPNSEGGRTTPSIVGFGKSGDRLVGQLAKRQAVTNAENTVYSIKRFIGRRWDDTEE 82 (653)
T ss_pred cEEEEEeCcccEEEEEEECCEEEEEECCCCCccCceEEEEeCCCCEEEcHHHHHhhhhCcccchHHHHHHhCCCccchhH
Confidence 478999 99999999999999999999999999999999984 5899999999999999999999999999999877543
Q ss_pred HhhcccCCeeEeec-CCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 414 QADMKHWPFEVVSD-GGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 414 ~~~~~~~p~~~~~~-~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
...++||.++.. ++...+ ... +..++|++|++++|++|++.|+.++|..+ .++|||||++
T Consensus 83 --~~~~~~~~~v~~~~~~~~~--~i~--~~~~~peei~a~iL~~lk~~ae~~lg~~v-------------~~~VITVPa~ 143 (653)
T PRK13411 83 --ERSRVPYTCVKGRDDTVNV--QIR--GRNYTPQEISAMILQKLKQDAEAYLGEPV-------------TQAVITVPAY 143 (653)
T ss_pred --HhhcCCceEEecCCCceEE--EEC--CEEECHHHHHHHHHHHHHHHHHHHhCCCc-------------ceEEEEECCC
Confidence 456789987653 333333 333 37899999999999999999999998765 8999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|++.||+++++||+.|||+.+++++||+|||++|+.... ..+.++||+|+||||+|+|++++.
T Consensus 144 f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAl~y~~~~~------~~~~~vlV~DlGgGT~dvsi~~~~----------- 206 (653)
T PRK13411 144 FTDAQRQATKDAGTIAGLEVLRIINEPTAAALAYGLDKQ------DQEQLILVFDLGGGTFDVSILQLG----------- 206 (653)
T ss_pred CCcHHHHHHHHHHHHcCCCeEEEecchHHHHHHhccccc------CCCCEEEEEEcCCCeEEEEEEEEe-----------
Confidence 999999999999999999999999999999999977542 135678888888888888877643
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
++.+++++..++..+||.+||.+|++++
T Consensus 207 ----------------------------------------------------~~~~~V~at~gd~~LGG~dfD~~l~~~l 234 (653)
T PRK13411 207 ----------------------------------------------------DGVFEVKATAGNNHLGGDDFDNCIVDWL 234 (653)
T ss_pred ----------------------------------------------------CCEEEEEEEecCCCcCHHHHHHHHHHHH
Confidence 3456788889999999999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccC----CeeeEEEEehHHHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPV 728 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~e~e~~~~~~i~~i~~~i 728 (840)
.++|..+.+.++..+++.+.+|+.+||++|+.||.+..+.+.++.+.. +.++.+.|||++|+++++|+++++.++|
T Consensus 235 ~~~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~~~i~i~~~~~d~~~~~~~~~~itR~~fe~l~~~l~~~~~~~i 314 (653)
T PRK13411 235 VENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINLPFITADETGPKHLEMELTRAKFEELTKDLVEATIEPM 314 (653)
T ss_pred HHHHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence 999988888778888899999999999999999999998888876542 3468899999999999999999999999
Q ss_pred HHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEec
Q psy7262 729 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVT 808 (840)
Q Consensus 729 ~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~ 808 (840)
+++|+++++.+.+|+.|+||||+||+|+|++.|++.|++..+....||++|||+|||++|+.+++. ++++.++|++
T Consensus 315 ~~~L~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f~~~~~~~~~npdeaVA~GAAi~aa~l~~~----~~~~~~~dv~ 390 (653)
T PRK13411 315 QQALKDAGLKPEDIDRVILVGGSTRIPAVQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGGE----VKDLLLLDVT 390 (653)
T ss_pred HHHHHHcCCCHHHCcEEEEECCCCCcchHHHHHHHHcCCcCcCCCCCchHHHHHHHHHHHHhhcCC----ccceeeeecc
Confidence 999999999999999999999999999999999999977778888999999999999999999873 6789999999
Q ss_pred cceeEEEeeCCeEEEccccCceEeeec
Q psy7262 809 PLSLGIETAGGVSYSQSQLGWLLIFYV 835 (840)
Q Consensus 809 ~~s~gi~~~~~~~~~~~~~~~~~~~~~ 835 (840)
|++||+++.++.+.++++.+..++..+
T Consensus 391 p~slgi~~~~~~~~~ii~r~t~iP~~~ 417 (653)
T PRK13411 391 PLSLGIETLGEVFTKIIERNTTIPTSK 417 (653)
T ss_pred cceeeEEecCCceEEEEECCCccccee
Confidence 999999999998888876655554444
No 7
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=100.00 E-value=4.2e-62 Score=578.43 Aligned_cols=403 Identities=54% Similarity=0.855 Sum_probs=359.5
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEee-CCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 413 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~-~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~ 413 (840)
+++||| |||||+||++++|.+++++|..|++++||+|+|. ++++++|..|..+...+|.++++++|+|||+. ++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~--~~~~ 80 (627)
T PRK00290 3 KIIGIDLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTKDGERLVGQPAKRQAVTNPENTIFSIKRLMGRR--DEEV 80 (627)
T ss_pred cEEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEeCCCCEEEcHHHHHhhhhCchhhHHHHHHHhCCC--chHH
Confidence 578999 9999999999999999999999999999999997 67899999999999999999999999999988 4556
Q ss_pred HhhcccCCeeEeec-CCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 414 QADMKHWPFEVVSD-GGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 414 ~~~~~~~p~~~~~~-~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
+...+.+||.+... ++...+ ...+ ..++|+++++++|++|++.|+.+++..+ .++|||||++
T Consensus 81 ~~~~~~~p~~~~~~~~~~~~~--~~~~--~~~~peel~a~iL~~lk~~ae~~~g~~v-------------~~~VItVPa~ 143 (627)
T PRK00290 81 QKDIKLVPYKIVKADNGDAWV--EIDG--KKYTPQEISAMILQKLKKDAEDYLGEKV-------------TEAVITVPAY 143 (627)
T ss_pred HHHhhcCCeEEEEcCCCceEE--EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCC-------------ceEEEEECCC
Confidence 66778899998753 333333 3443 7899999999999999999999988765 8999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|++++.
T Consensus 144 f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~-------~~~~vlV~D~GggT~dvsv~~~~----------- 205 (627)
T PRK00290 144 FNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK-------GDEKILVYDLGGGTFDVSILEIG----------- 205 (627)
T ss_pred CCHHHHHHHHHHHHHcCCceEEEecchHHHHHHhhhccC-------CCCEEEEEECCCCeEEEEEEEEe-----------
Confidence 999999999999999999999999999999999976542 45789999999999999888653
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
++.+++++..++..+||.+||.+|++++
T Consensus 206 ----------------------------------------------------~~~~~vla~~gd~~lGG~d~D~~l~~~~ 233 (627)
T PRK00290 206 ----------------------------------------------------DGVFEVLSTNGDTHLGGDDFDQRIIDYL 233 (627)
T ss_pred ----------------------------------------------------CCeEEEEEecCCCCcChHHHHHHHHHHH
Confidence 2356778888989999999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccC----CeeeEEEEehHHHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPV 728 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~e~e~~~~~~i~~i~~~i 728 (840)
.++++.+++.++..+++.+.+|+.+||++|+.||.+..+.+.++.+.. +.++.+.|||++|+++++++++++.++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i 313 (627)
T PRK00290 234 ADEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSAQQTEINLPFITADASGPKHLEIKLTRAKFEELTEDLVERTIEPC 313 (627)
T ss_pred HHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCeEEEEEeecccCCCCCeEEEEEECHHHHHHHHHHHHHHHHHHH
Confidence 999998888778888899999999999999999999999888876643 2578899999999999999999999999
Q ss_pred HHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEec
Q psy7262 729 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVT 808 (840)
Q Consensus 729 ~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~ 808 (840)
+++|+++++.+.+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++ .++++.++|++
T Consensus 314 ~~~l~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f-g~~~~~~~npdeava~GAa~~aa~l~~----~~~~~~~~d~~ 388 (627)
T PRK00290 314 KQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFF-GKEPNKGVNPDEVVAIGAAIQGGVLAG----DVKDVLLLDVT 388 (627)
T ss_pred HHHHHHcCCChhhCcEEEEECCcCCChHHHHHHHHHh-CCCCCcCcCChHHHHHhHHHHHHHhcC----Cccceeeeecc
Confidence 9999999999999999999999999999999999999 667788899999999999999999987 35789999999
Q ss_pred cceeEEEeeCCeEEEccccCceEe
Q psy7262 809 PLSLGIETAGGVSYSQSQLGWLLI 832 (840)
Q Consensus 809 ~~s~gi~~~~~~~~~~~~~~~~~~ 832 (840)
|++||+++.++.+.++++.+..++
T Consensus 389 ~~slgi~~~~~~~~~ii~~~t~~P 412 (627)
T PRK00290 389 PLSLGIETLGGVMTKLIERNTTIP 412 (627)
T ss_pred ceEEEEEecCCeEEEEecCCCcCC
Confidence 999999999998888776644443
No 8
>PLN03184 chloroplast Hsp70; Provisional
Probab=100.00 E-value=3e-62 Score=579.07 Aligned_cols=409 Identities=50% Similarity=0.766 Sum_probs=360.4
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEee-CCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 413 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~-~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~ 413 (840)
.++||| |||||+||++++|.+.+|+|..|++++||+|+|. ++.+++|..|..+...+|.++++++|+|||+.+.+ .
T Consensus 40 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d--~ 117 (673)
T PLN03184 40 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--V 117 (673)
T ss_pred CEEEEEeCcCcEEEEEEECCeEEEEECCCCCeecceEEEEcCCCCEEECHHHHHhhhhCchhhhHHHHHhhCCCcch--h
Confidence 589999 9999999999999999999999999999999997 45899999999999999999999999999999865 3
Q ss_pred HhhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 414 QADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 414 ~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
+.....+||.+.. .++...+.+.. .+..++|+++++++|++|++.++.+++..+ .++|||||++
T Consensus 118 ~~~~~~~~~~v~~~~~~~v~~~~~~--~~~~~speei~a~iL~~lk~~ae~~lg~~v-------------~~~VITVPa~ 182 (673)
T PLN03184 118 DEESKQVSYRVVRDENGNVKLDCPA--IGKQFAAEEISAQVLRKLVDDASKFLNDKV-------------TKAVITVPAY 182 (673)
T ss_pred hhhhhcCCeEEEecCCCcEEEEEec--CCeEEcHHHHHHHHHHHHHHHHHHHhCCCC-------------CeEEEEECCC
Confidence 4456778998865 34444444433 346899999999999999999999888755 8999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|++++.
T Consensus 183 f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlayg~~~~-------~~~~vlV~DlGgGT~DvSi~~~~----------- 244 (673)
T PLN03184 183 FNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKK-------SNETILVFDLGGGTFDVSVLEVG----------- 244 (673)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEeCcHHHHHHHhhcccC-------CCCEEEEEECCCCeEEEEEEEec-----------
Confidence 999999999999999999999999999999999976542 45678889999999888887653
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
++.+++++..++..+||.+||.+|++++
T Consensus 245 ----------------------------------------------------~~~~eVla~~gd~~LGG~dfD~~L~~~~ 272 (673)
T PLN03184 245 ----------------------------------------------------DGVFEVLSTSGDTHLGGDDFDKRIVDWL 272 (673)
T ss_pred ----------------------------------------------------CCEEEEEEecCCCccCHHHHHHHHHHHH
Confidence 2356788888999999999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccC----CeeeEEEEehHHHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPV 728 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~e~e~~~~~~i~~i~~~i 728 (840)
.++|+.+++.++..+++.+.+|+.+||++|+.||.+..+.+.++.+.. +.++...|||++|+++++++++++.++|
T Consensus 273 ~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~r~~~~i 352 (673)
T PLN03184 273 ASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLTQTSISLPFITATADGPKHIDTTLTRAKFEELCSDLLDRCKTPV 352 (673)
T ss_pred HHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCCcceEEEEeeeccCCCCceEEEEECHHHHHHHHHHHHHHHHHHH
Confidence 999998888777788999999999999999999999998888875532 3578899999999999999999999999
Q ss_pred HHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEec
Q psy7262 729 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVT 808 (840)
Q Consensus 729 ~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~ 808 (840)
+++|+++++...+|+.|+||||+||+|.|++.|++.| +..+....||++|||+|||++|+++++ .++++.++|++
T Consensus 353 ~~~L~~a~~~~~dId~ViLvGGssriP~V~~~i~~~f-g~~~~~~~npdeaVA~GAAi~aa~ls~----~~~~~~~~dv~ 427 (673)
T PLN03184 353 ENALRDAKLSFKDIDEVILVGGSTRIPAVQELVKKLT-GKDPNVTVNPDEVVALGAAVQAGVLAG----EVSDIVLLDVT 427 (673)
T ss_pred HHHHHHcCCChhHccEEEEECCccccHHHHHHHHHHh-CCCcccccCcchHHHHHHHHHHHHhcc----CccceEEEecc
Confidence 9999999999999999999999999999999999999 566777889999999999999999987 35678999999
Q ss_pred cceeEEEeeCCeEEEccccCceEeeecc
Q psy7262 809 PLSLGIETAGGVSYSQSQLGWLLIFYVC 836 (840)
Q Consensus 809 ~~s~gi~~~~~~~~~~~~~~~~~~~~~~ 836 (840)
|++||+++.++.+.++++.+..++..+.
T Consensus 428 p~slgi~~~~~~~~~ii~r~t~iP~~~~ 455 (673)
T PLN03184 428 PLSLGLETLGGVMTKIIPRNTTLPTSKS 455 (673)
T ss_pred cccceEEecCCeeEEEEeCCCccceecc
Confidence 9999999999999888876655554443
No 9
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=100.00 E-value=1.8e-61 Score=571.38 Aligned_cols=403 Identities=55% Similarity=0.857 Sum_probs=357.5
Q ss_pred Ccccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCC-cEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHHH
Q psy7262 337 SHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 414 (840)
Q Consensus 337 ~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~-~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~~ 414 (840)
++||| |||||+||++++|.+.+++|..|++++||+|+|.++ ++++|..|..++..+|.++++++|+|||+.+. .++
T Consensus 2 viGIDlGtt~s~va~~~~g~~~ii~n~~~~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~~~--~~~ 79 (595)
T TIGR02350 2 IIGIDLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTKNGERLVGQPAKRQAVTNPENTIYSIKRFMGRRFD--EVT 79 (595)
T ss_pred EEEEEeCcccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhhhhCchhhhHHHHHHhCCCch--HHH
Confidence 57999 999999999999999999999999999999999954 89999999999999999999999999999873 355
Q ss_pred hhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCC
Q psy7262 415 ADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFN 494 (840)
Q Consensus 415 ~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~ 494 (840)
.....+||.+..+++...+.+ . +..++|+++++++|++|++.++.+++.++ .++|||||++|+
T Consensus 80 ~~~~~~~~~v~~~~~~~~~~v--~--~~~~~peel~a~~L~~l~~~a~~~~~~~v-------------~~~VItVPa~f~ 142 (595)
T TIGR02350 80 EEAKRVPYKVVGDGGDVRVKV--D--GKEYTPQEISAMILQKLKKDAEAYLGEKV-------------TEAVITVPAYFN 142 (595)
T ss_pred HHhhcCCeeEEcCCCceEEEE--C--CEEecHHHHHHHHHHHHHHHHHHHhCCCC-------------CeEEEEECCCCC
Confidence 567789998555555555544 3 47899999999999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeE
Q psy7262 495 DSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVL 574 (840)
Q Consensus 495 ~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~ 574 (840)
+.||+++++||+.|||+.+.+++||+|||++|+.... ..+.++||+|+||||+|+|++++.
T Consensus 143 ~~qR~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~------~~~~~vlV~D~Gggt~dvsv~~~~------------- 203 (595)
T TIGR02350 143 DAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKS------KKDEKILVFDLGGGTFDVSILEIG------------- 203 (595)
T ss_pred HHHHHHHHHHHHHcCCceEEEecchHHHHHHHhhccc------CCCcEEEEEECCCCeEEEEEEEec-------------
Confidence 9999999999999999999999999999999976542 246788999999999998888653
Q ss_pred EEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHH
Q psy7262 575 IFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQ 654 (840)
Q Consensus 575 ~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~ 654 (840)
++.+++++..++..+||.+||..|++++.+
T Consensus 204 --------------------------------------------------~~~~~v~~~~gd~~lGG~d~D~~l~~~~~~ 233 (595)
T TIGR02350 204 --------------------------------------------------DGVFEVLSTAGDTHLGGDDFDQRIIDWLAD 233 (595)
T ss_pred --------------------------------------------------CCeEEEEEecCCcccCchhHHHHHHHHHHH
Confidence 235677888888999999999999999999
Q ss_pred HHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccC----CeeeEEEEehHHHHHHHHHHHHHHHHHHHH
Q psy7262 655 EFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPVEK 730 (840)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~e~e~~~~~~i~~i~~~i~~ 730 (840)
++.++++.++..+++.+.+|+.+||++|+.||.+..+.+.++.+.. +.++.+.|||++|+++++|+++++.++|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itr~~fe~l~~~l~~~~~~~i~~ 313 (595)
T TIGR02350 234 EFKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLPFITADASGPKHLEMTLTRAKFEELTADLVERTKEPVRQ 313 (595)
T ss_pred HHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEeeecccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888778888899999999999999999999998888876543 356889999999999999999999999999
Q ss_pred HHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccc
Q psy7262 731 SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPL 810 (840)
Q Consensus 731 ~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~ 810 (840)
+|+++++.+.+|+.|+||||+|++|+|++.|++.|+ .++....||++|||+|||++|+.+++. ++++.++|++|+
T Consensus 314 ~l~~a~~~~~~i~~V~LvGGssriP~v~~~i~~~f~-~~~~~~~~pdeava~GAa~~aa~l~~~----~~~~~~~d~~~~ 388 (595)
T TIGR02350 314 ALKDAGLSASDIDEVILVGGSTRIPAVQELVKDFFG-KEPNKSVNPDEVVAIGAAIQGGVLKGD----VKDVLLLDVTPL 388 (595)
T ss_pred HHHHcCCCHhHCcEEEEECCcccChHHHHHHHHHhC-CcccCCcCcHHHHHHHHHHHHHHhcCC----cccceeeecccc
Confidence 999999999999999999999999999999999995 678888999999999999999999873 678899999999
Q ss_pred eeEEEeeCCeEEEccccCceEe
Q psy7262 811 SLGIETAGGVSYSQSQLGWLLI 832 (840)
Q Consensus 811 s~gi~~~~~~~~~~~~~~~~~~ 832 (840)
+||++..+|.+.++++.+..++
T Consensus 389 ~igi~~~~~~~~~ii~~~~~iP 410 (595)
T TIGR02350 389 SLGIETLGGVMTKLIERNTTIP 410 (595)
T ss_pred eeEEEecCCceEEEEeCCCcCC
Confidence 9999999998887765544433
No 10
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=100.00 E-value=2.2e-61 Score=566.85 Aligned_cols=401 Identities=41% Similarity=0.635 Sum_probs=351.2
Q ss_pred Ccccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCC-cEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHHH
Q psy7262 337 SHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 414 (840)
Q Consensus 337 ~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~-~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~~ 414 (840)
++||| |||||+||++++|++++|+|..|++.+||+|+|.++ .+++|..|..++..+|.++++++|||+|+.+.+...
T Consensus 1 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG~~~~d~~~- 79 (599)
T TIGR01991 1 AVGIDLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKDGGVEVGKEALAAAAEDPKNTISSVKRLMGRSIEDIKT- 79 (599)
T ss_pred CEEEEEccccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEecHHHHHhhhhChhhhHHHHHHHhCCCccchhh-
Confidence 36999 999999999999999999999999999999999855 899999999999999999999999999998766432
Q ss_pred hhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCC
Q psy7262 415 ADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYF 493 (840)
Q Consensus 415 ~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~ 493 (840)
...+||.+.. .++...+.+ .+ ..++|+++.+++|++|++.|+.+++..+ .++|||||++|
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~--~~--~~~~p~ei~a~iL~~lk~~a~~~lg~~v-------------~~~VItVPa~f 140 (599)
T TIGR01991 80 --FSILPYRFVDGPGEMVRLRT--VQ--GTVTPVEVSAEILKKLKQRAEESLGGDL-------------VGAVITVPAYF 140 (599)
T ss_pred --cccCCEEEEEcCCCceEEEe--CC--CEEcHHHHHHHHHHHHHHHHHHHhCCCc-------------ceEEEEECCCC
Confidence 5667898764 334444433 22 4789999999999999999999988765 89999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCcee
Q psy7262 494 NDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNV 573 (840)
Q Consensus 494 ~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~ 573 (840)
++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|++++.
T Consensus 141 ~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~-------~~~~vlV~DlGgGT~DvSi~~~~------------ 201 (599)
T TIGR01991 141 DDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDKA-------SEGIYAVYDLGGGTFDVSILKLT------------ 201 (599)
T ss_pred CHHHHHHHHHHHHHcCCCceEEecCHHHHHHHHhhccC-------CCCEEEEEEcCCCeEEEEEEEEc------------
Confidence 99999999999999999999999999999999986643 45788999999999999888653
Q ss_pred EEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHH
Q psy7262 574 LIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 653 (840)
Q Consensus 574 ~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 653 (840)
++.+++++..++..+||.+||.+|++++.
T Consensus 202 ---------------------------------------------------~~~~~vla~~gd~~lGG~d~D~~l~~~l~ 230 (599)
T TIGR01991 202 ---------------------------------------------------KGVFEVLATGGDSALGGDDFDHALAKWIL 230 (599)
T ss_pred ---------------------------------------------------CCeEEEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 23467888889999999999999999998
Q ss_pred HHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHH
Q psy7262 654 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLR 733 (840)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~ 733 (840)
+++ +.+...+++.+.+|+.+||++|+.||....+.+.++. ++.++.+.|||++|+++++|+++++.++|.++|+
T Consensus 231 ~~~----~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~--~g~~~~~~itr~efe~l~~~ll~~i~~~i~~~L~ 304 (599)
T TIGR01991 231 KQL----GISADLNPEDQRLLLQAARAAKEALTDAESVEVDFTL--DGKDFKGKLTRDEFEALIQPLVQKTLSICRRALR 304 (599)
T ss_pred Hhh----CCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEEEE--CCcEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654 3344567788889999999999999999988888864 5778999999999999999999999999999999
Q ss_pred HcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccceeE
Q psy7262 734 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLG 813 (840)
Q Consensus 734 ~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~s~g 813 (840)
++++.+.+|+.|+||||+|++|+|++.|++.| +..+....||++|||+|||++|+.+++ .+..+++.+.|++|++||
T Consensus 305 ~a~~~~~~id~ViLvGGssriP~V~~~l~~~f-~~~~~~~~npdeaVA~GAai~a~~l~~--~~~~~~~~l~dv~p~slg 381 (599)
T TIGR01991 305 DAGLSVEEIKGVVLVGGSTRMPLVRRAVAELF-GQEPLTDIDPDQVVALGAAIQADLLAG--NRIGNDLLLLDVTPLSLG 381 (599)
T ss_pred HcCCChhhCCEEEEECCcCCChHHHHHHHHHh-CCCCCCCCCCcHHHHHHHHHHHHHhcc--ccccCceEEEEeeeeeeE
Confidence 99999999999999999999999999999999 455677889999999999999999997 445568999999999999
Q ss_pred EEeeCCeEEEccccCceEeeecc
Q psy7262 814 IETAGGVSYSQSQLGWLLIFYVC 836 (840)
Q Consensus 814 i~~~~~~~~~~~~~~~~~~~~~~ 836 (840)
+++.+|.+.++++.+..++..+.
T Consensus 382 i~~~~g~~~~ii~rnt~iP~~~~ 404 (599)
T TIGR01991 382 IETMGGLVEKIIPRNTPIPVARA 404 (599)
T ss_pred EEecCCEEEEEEeCCCcCCccce
Confidence 99999999988877666655443
No 11
>CHL00094 dnaK heat shock protein 70
Probab=100.00 E-value=1.6e-60 Score=563.21 Aligned_cols=409 Identities=52% Similarity=0.803 Sum_probs=359.3
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeC-CcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 413 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~-~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~ 413 (840)
.++||| |||||++|++++|.+.+|+|..|++++||+|+|.+ +++++|..|......+|.++++++|++||+.+.+ .
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~~--~ 80 (621)
T CHL00094 3 KVVGIDLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTKKGDLLVGQIAKRQAVINPENTFYSVKRFIGRKFSE--I 80 (621)
T ss_pred ceEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEcCCCCEEECHHHHHhHHhCccceehhhHHhcCCChHH--H
Confidence 578999 99999999999999999999999999999999985 5799999999999999999999999999998754 3
Q ss_pred HhhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 414 QADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 414 ~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
......+||.+.. +++...+.+. ..+..++|+++.+++|++|++.|+.+++..+ .++|||||++
T Consensus 81 ~~~~~~~~~~v~~~~~g~i~~~~~--~~~~~~s~eei~a~iL~~l~~~ae~~lg~~v-------------~~~VItVPa~ 145 (621)
T CHL00094 81 SEEAKQVSYKVKTDSNGNIKIECP--ALNKDFSPEEISAQVLRKLVEDASKYLGETV-------------TQAVITVPAY 145 (621)
T ss_pred HhhhhcCCeEEEECCCCCEEEEEe--cCCeEEcHHHHHHHHHHHHHHHHHHHhCCCC-------------CeEEEEECCC
Confidence 4455668998765 3344444433 3347899999999999999999999887755 7999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|+++++
T Consensus 146 f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAlay~~~~~-------~~~~vlV~DlGgGT~DvSv~~~~----------- 207 (621)
T CHL00094 146 FNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKK-------NNETILVFDLGGGTFDVSILEVG----------- 207 (621)
T ss_pred CCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHhccccC-------CCCEEEEEEcCCCeEEEEEEEEc-----------
Confidence 999999999999999999999999999999999976532 45678999999999998887653
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
++.+++++..++..+||.+||.+|++++
T Consensus 208 ----------------------------------------------------~~~~~vla~~gd~~lGG~d~D~~l~~~~ 235 (621)
T CHL00094 208 ----------------------------------------------------DGVFEVLSTSGDTHLGGDDFDKKIVNWL 235 (621)
T ss_pred ----------------------------------------------------CCEEEEEEEecCCCcChHHHHHHHHHHH
Confidence 2356788888999999999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccC----CeeeEEEEehHHHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPV 728 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~e~e~~~~~~i~~i~~~i 728 (840)
.++|+++++.++..+++.+.+|+.+||++|+.||....+.+.++.+.. +.++...|+|++|+++++++++++..+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i 315 (621)
T CHL00094 236 IKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQTGPKHIEKTLTRAKFEELCSDLINRCRIPV 315 (621)
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeecccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence 999998888878788899999999999999999999888888876542 2467889999999999999999999999
Q ss_pred HHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEec
Q psy7262 729 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVT 808 (840)
Q Consensus 729 ~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~ 808 (840)
+++|+++++.+.+|+.|+||||+|++|.|++.|++.| +..+....||++|||+|||++|+.+++ .++++.++|++
T Consensus 316 ~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f-g~~~~~~~~pdeava~GAA~~aa~ls~----~~~~~~~~d~~ 390 (621)
T CHL00094 316 ENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKKLL-GKKPNQSVNPDEVVAIGAAVQAGVLAG----EVKDILLLDVT 390 (621)
T ss_pred HHHHHHcCCChhhCcEEEEECCccCChHHHHHHHHHh-CCCcCcCCCchhHHHhhhHHHHHHhcC----Cccceeeeeee
Confidence 9999999999999999999999999999999999999 566778889999999999999999987 35688999999
Q ss_pred cceeEEEeeCCeEEEccccCceEeeecc
Q psy7262 809 PLSLGIETAGGVSYSQSQLGWLLIFYVC 836 (840)
Q Consensus 809 ~~s~gi~~~~~~~~~~~~~~~~~~~~~~ 836 (840)
|++||++..+|.+.++++.+..++..++
T Consensus 391 ~~~lgi~~~~~~~~~ii~~~t~iP~~~~ 418 (621)
T CHL00094 391 PLSLGVETLGGVMTKIIPRNTTIPTKKS 418 (621)
T ss_pred ceeeeeeccCCEEEEEEeCCCccceeee
Confidence 9999999999999888877666554443
No 12
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=9.6e-61 Score=562.48 Aligned_cols=399 Identities=40% Similarity=0.633 Sum_probs=347.2
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 414 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~~ 414 (840)
.++||| |||||+||++.+|++++|+|..|++++||+|+|.++++++|..|..++..+|.++++++|+|+|+.+.+. +
T Consensus 20 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~--~ 97 (616)
T PRK05183 20 LAVGIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYLEDGIEVGYEARANAAQDPKNTISSVKRFMGRSLADI--Q 97 (616)
T ss_pred eEEEEEeccccEEEEEEECCEEEEEEcCCCCeecCeEEEEcCCCEEEcHHHHHhhHhCchhhHHHHHHHhCCCchhh--h
Confidence 478999 9999999999999999999999999999999999888999999999999999999999999999987653 3
Q ss_pred hhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCC
Q psy7262 415 ADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYF 493 (840)
Q Consensus 415 ~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~ 493 (840)
.....+||.+.. .++...+.+ .+ ..++|+++.+++|++|++.++.++|..+ ..+|||||++|
T Consensus 98 ~~~~~~~~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v-------------~~~VITVPa~f 160 (616)
T PRK05183 98 QRYPHLPYQFVASENGMPLIRT--AQ--GLKSPVEVSAEILKALRQRAEETLGGEL-------------DGAVITVPAYF 160 (616)
T ss_pred hhhhcCCeEEEecCCCceEEEe--cC--CeEcHHHHHHHHHHHHHHHHHHHhCCCc-------------ceEEEEECCCC
Confidence 335667888764 345544443 22 4789999999999999999999988755 89999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCcee
Q psy7262 494 NDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNV 573 (840)
Q Consensus 494 ~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~ 573 (840)
++.||+++++||+.|||+.+++++||+|||++|+.... .+.++||+|+||||+|+|++++.
T Consensus 161 ~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~-------~~~~vlV~DlGGGT~DvSv~~~~------------ 221 (616)
T PRK05183 161 DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDSG-------QEGVIAVYDLGGGTFDISILRLS------------ 221 (616)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEecchHHHHHHhhcccC-------CCCEEEEEECCCCeEEEEEEEee------------
Confidence 99999999999999999999999999999999976542 35688999999999998887653
Q ss_pred EEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHH
Q psy7262 574 LIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 653 (840)
Q Consensus 574 ~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 653 (840)
++.+++++..++..+||.+||.+|++++.
T Consensus 222 ---------------------------------------------------~~~~evlat~gd~~lGG~d~D~~l~~~~~ 250 (616)
T PRK05183 222 ---------------------------------------------------KGVFEVLATGGDSALGGDDFDHLLADWIL 250 (616)
T ss_pred ---------------------------------------------------CCEEEEEEecCCCCcCHHHHHHHHHHHHH
Confidence 23567888899999999999999999998
Q ss_pred HHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHH
Q psy7262 654 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLR 733 (840)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~ 733 (840)
++++ .+...+++.+.+|+.+||++|+.||....+.+.+... ...|||++|+++++|+++++.+++.++|+
T Consensus 251 ~~~~----~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~------~~~itr~efe~l~~~l~~~~~~~i~~~L~ 320 (616)
T PRK05183 251 EQAG----LSPRLDPEDQRLLLDAARAAKEALSDADSVEVSVALW------QGEITREQFNALIAPLVKRTLLACRRALR 320 (616)
T ss_pred HHcC----CCcCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEecC------CCeEcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7664 3333577888899999999999999999888887532 12499999999999999999999999999
Q ss_pred HcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccceeE
Q psy7262 734 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLG 813 (840)
Q Consensus 734 ~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~s~g 813 (840)
++++.+.+|+.|+||||+|++|+|++.|++.|+ ..+....||++|||+|||++|+.+++ .+..+++.+.|++|++||
T Consensus 321 ~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg-~~~~~~~npdeaVA~GAAi~a~~l~~--~~~~~~~~l~dv~p~slg 397 (616)
T PRK05183 321 DAGVEADEVKEVVMVGGSTRVPLVREAVGEFFG-RTPLTSIDPDKVVAIGAAIQADILAG--NKPDSDMLLLDVIPLSLG 397 (616)
T ss_pred HcCCCcccCCEEEEECCcccChHHHHHHHHHhc-cCcCcCCCchHHHHHHHHHHHHHhcc--ccccCceEEEeecccccc
Confidence 999999999999999999999999999999994 45667889999999999999999997 344578999999999999
Q ss_pred EEeeCCeEEEccccCceEeeecc
Q psy7262 814 IETAGGVSYSQSQLGWLLIFYVC 836 (840)
Q Consensus 814 i~~~~~~~~~~~~~~~~~~~~~~ 836 (840)
+++.+|.+.++++.+..++..++
T Consensus 398 i~~~~g~~~~ii~r~t~iP~~~~ 420 (616)
T PRK05183 398 LETMGGLVEKIIPRNTTIPVARA 420 (616)
T ss_pred ceecCCeEEEEEeCCCccccccc
Confidence 99999999988877666665553
No 13
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=100.00 E-value=5.1e-61 Score=572.47 Aligned_cols=413 Identities=51% Similarity=0.814 Sum_probs=363.9
Q ss_pred Ccccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHHHh
Q psy7262 337 SHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 415 (840)
Q Consensus 337 ~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~~~ 415 (840)
++||| |||+++||++.+|.+++|.|..|+|++||+|+|.++++++|..|...+.++|+++++++|+|||+.+.+..++.
T Consensus 1 viGID~Gt~~~~va~~~~~~~~ii~~~~~~~~~ps~v~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~liG~~~~~~~~~~ 80 (602)
T PF00012_consen 1 VIGIDLGTTNSKVAVFKNGKPEIILNEEGKRKTPSVVSFSDNERLVGEDAKSQMIRNPKNTIYNLKRLIGRKFDDPDVQK 80 (602)
T ss_dssp EEEEEE-SSEEEEEEEETTEEEEE--TTS-SSEESEEEEESSCEEETHHHHHTTTTSGGGEEESGGGTTTSBTTSHHHHH
T ss_pred CEEEEeccCCEEEEEEEeccccccccccccccccceeeEeeecccCCcchhhhcccccccccccccccccccccccccch
Confidence 47999 99999999999999999999999999999999999899999999999999999999999999999999988888
Q ss_pred hcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCC
Q psy7262 416 DMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFN 494 (840)
Q Consensus 416 ~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~ 494 (840)
....+||.+.. .++...+.+.+.+....++|+++++++|++|++.++.+++..+ .++|||||++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~~~~~-------------~~~vitVPa~~~ 147 (602)
T PF00012_consen 81 EKKKFPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMILKYLKEMAEKYLGEKV-------------TDVVITVPAYFT 147 (602)
T ss_dssp HHTTSSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHTSBE-------------EEEEEEE-TT--
T ss_pred hhhcccccccccccccccccccccccceeeeeecccccchhhhcccchhhccccc-------------ccceeeechhhh
Confidence 88899999875 4888889999888888999999999999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeE
Q psy7262 495 DSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVL 574 (840)
Q Consensus 495 ~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~ 574 (840)
+.||++|++||+.|||+.+.+++||+|||++|++.... .+..+||+|+||||+|+|++++.
T Consensus 148 ~~qr~~~~~Aa~~agl~~~~li~Ep~Aaa~~y~~~~~~------~~~~vlv~D~Gggt~dvs~~~~~------------- 208 (602)
T PF00012_consen 148 DEQRQALRDAAELAGLNVLRLINEPTAAALAYGLERSD------KGKTVLVVDFGGGTFDVSVVEFS------------- 208 (602)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEEEHHHHHHHHTTTTSSS------SEEEEEEEEEESSEEEEEEEEEE-------------
T ss_pred hhhhhcccccccccccccceeecccccccccccccccc------cccceeccccccceEeeeehhcc-------------
Confidence 99999999999999999999999999999999776542 56778888888888888877643
Q ss_pred EEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHH
Q psy7262 575 IFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQ 654 (840)
Q Consensus 575 ~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~ 654 (840)
++.+++++..++..+||.+||.+|++++.+
T Consensus 209 --------------------------------------------------~~~~~v~~~~~~~~lGG~~~D~~l~~~~~~ 238 (602)
T PF00012_consen 209 --------------------------------------------------NGQFEVLATAGDNNLGGRDFDEALAEYLLE 238 (602)
T ss_dssp --------------------------------------------------TTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------cccccccccccccccccceecceeeccccc
Confidence 345677788888999999999999999999
Q ss_pred HHHHhccCCccccHHHHHHHHHHHHHHHHHcCC--CCeeEEEEecccC-CeeeEEEEehHHHHHHHHHHHHHHHHHHHHH
Q psy7262 655 EFKRKYKKDLTTNKRALRRLRTACERAKRTLSS--STQASIEIDSLFE-GVDFYTSITRARFEELNADLFRGTMEPVEKS 731 (840)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~--~~~~~i~i~~~~~-~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~ 731 (840)
+++.+++.+...+++.+.+|+.+||++|+.||. .....+.++.+.+ +.++.+.|+|++|+++++|+++++.++|.++
T Consensus 239 ~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~ 318 (602)
T PF00012_consen 239 KFKKKYKIDLRENPRAMARLLEAAEKAKEQLSSNDNTEITISIESLYDDGEDFSITITREEFEELCEPLLERIIEPIEKA 318 (602)
T ss_dssp HHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTTTSSSSEEEEEEEEEETTTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccccccccccccccc
Confidence 999888888888899999999999999999999 6677778877776 7899999999999999999999999999999
Q ss_pred HHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccce
Q psy7262 732 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLS 811 (840)
Q Consensus 732 l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~s 811 (840)
|++++....+|+.|+|+||+|++|+|++.|++.|+ ..+..+.||++|||+|||++|+.+++ .+...++.+.|++|++
T Consensus 319 l~~~~~~~~~i~~V~lvGG~sr~p~v~~~l~~~f~-~~~~~~~~p~~aVA~GAa~~a~~~~~--~~~~~~~~~~d~~~~~ 395 (602)
T PF00012_consen 319 LKDAGLKKEDIDSVLLVGGSSRIPYVQEALKELFG-KKISKSVNPDEAVARGAALYAAILSG--SFRVKDIKIIDVTPFS 395 (602)
T ss_dssp HHHTT--GGGESEEEEESGGGGSHHHHHHHHHHTT-SEEB-SS-TTTHHHHHHHHHHHHHHT--SCSSTSSCESEBESSE
T ss_pred cccccccccccceeEEecCcccchhhhhhhhhccc-cccccccccccccccccccchhhhcc--cccccccccccccccc
Confidence 99999999999999999999999999999999996 77888899999999999999999998 5777889999999999
Q ss_pred eEEEeeCCeEEEccccCceEeee
Q psy7262 812 LGIETAGGVSYSQSQLGWLLIFY 834 (840)
Q Consensus 812 ~gi~~~~~~~~~~~~~~~~~~~~ 834 (840)
|||+..++.+..+++.+..++..
T Consensus 396 ~~i~~~~~~~~~ii~~~t~iP~~ 418 (602)
T PF00012_consen 396 IGIEVSNGKFSKIIPKNTPIPSK 418 (602)
T ss_dssp EEEEETTTEEEEEESTTEBSSEE
T ss_pred ccccccccccccccccccccccc
Confidence 99999999888888776555443
No 14
>KOG0101|consensus
Probab=100.00 E-value=5.6e-60 Score=529.45 Aligned_cols=424 Identities=77% Similarity=1.093 Sum_probs=389.9
Q ss_pred ccCCCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCCh
Q psy7262 333 NFIPSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDA 411 (840)
Q Consensus 333 ~~~~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~ 411 (840)
+..+.+||| |||++||+++..|.++++.|..|++++||+|+|.++++++|.+|..+...+|.+++..+|+++|+.++++
T Consensus 5 ~~~~aiGIdlGtT~s~v~v~~~~~v~iian~~g~rttPs~vaf~~~e~~vg~~a~~qv~~np~ntv~~~krliGr~f~d~ 84 (620)
T KOG0101|consen 5 PESVAIGIDLGTTYSCVGVYQSGKVEIIANDQGNRTTPSVVAFTDTERLIGDAAKNQVARNPDNTVFDAKRLIGRFFDDP 84 (620)
T ss_pred cccceeeEeccCccceeeeEcCCcceeeeccccCccccceeeecccccchhhhhhhhhhcCCcceeeehhhhcCccccch
Confidence 345688999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeC
Q psy7262 412 TVQADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVP 490 (840)
Q Consensus 412 ~~~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVP 490 (840)
.++...++|||.+.. .++.+.+.+.+.++...++|+++.++.|.+++..++.++|..+ ..+|+|||
T Consensus 85 ~v~~~~k~~pf~V~~~~~~~~~i~~~~~~~~~~f~peeiss~~L~klke~Ae~~Lg~~v-------------~~aviTVP 151 (620)
T KOG0101|consen 85 EVQSDMKLWPFKVISDQGGKPKIQVTYKGETKSFNPEEISSMVLTKLKETAEAYLGKTV-------------KKAVVTVP 151 (620)
T ss_pred hhHhHhhcCCcccccccCCcceEEecccccceeeeeeeeeehhccccHHHHHHHhcCce-------------eeEEEEec
Confidence 999999999999884 5668999999999999999999999999999999999999876 89999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCC
Q psy7262 491 AYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGE 570 (840)
Q Consensus 491 a~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~ 570 (840)
++|++.||+++.+|+..|||+.+++++||+|||++|++.+. ...+.+|||.|+||||+|+|++
T Consensus 152 a~F~~~Qr~at~~A~~iaGl~vlrii~EPtAaalAygl~k~-----~~~~~~VlI~DlGggtfdvs~l------------ 214 (620)
T KOG0101|consen 152 AYFNDSQRAATKDAALIAGLNVLRIINEPTAAALAYGLDKK-----VLGERNVLIFDLGGGTFDVSVL------------ 214 (620)
T ss_pred CCcCHHHHHHHHHHHHhcCCceeeeecchHHHHHHhhcccc-----ccceeeEEEEEcCCCceeeeeE------------
Confidence 99999999999999999999999999999999999986544 2245555555555555555554
Q ss_pred ceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHH
Q psy7262 571 RNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 650 (840)
Q Consensus 571 ~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~ 650 (840)
.+.++.+.+++..++.++||++||+.+.+
T Consensus 215 ---------------------------------------------------~i~gG~~~vkat~gd~~lGGedf~~~l~~ 243 (620)
T KOG0101|consen 215 ---------------------------------------------------SLEGGIFEVKATAGDTHLGGEDFDNKLVN 243 (620)
T ss_pred ---------------------------------------------------EeccchhhhhhhcccccccchhhhHHHHH
Confidence 44445678889999999999999999999
Q ss_pred HHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHH
Q psy7262 651 HFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEK 730 (840)
Q Consensus 651 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~ 730 (840)
|+..+|+++++.++..+++...+|+.+||.+|+.||....+++.++++.++.++...|+|.+|+.++.+++..+..++..
T Consensus 244 h~~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~~~i~vdsL~~g~d~~~~itrarfe~l~~dlf~~~~~~v~~ 323 (620)
T KOG0101|consen 244 HFAAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEK 323 (620)
T ss_pred HHHHHHHHhhccccccchHHHHHHHHHHHHHHhhhcccccceeccchhhccccccceeehhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccc
Q psy7262 731 SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPL 810 (840)
Q Consensus 731 ~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~ 810 (840)
+|+++.++..+|+.|+||||++++|.++..+++.|++..+....||+++||+|||++|+.+++.....+.++++.|+.|+
T Consensus 324 ~L~da~~dk~~i~~vvlVGGstriPk~~~ll~d~f~~k~~~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~lid~~pl 403 (620)
T KOG0101|consen 324 ALKDAKLDKSDIDEVVLVGGSTRIPKVQKLLEDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSLNIQDLLLIDVAPL 403 (620)
T ss_pred HHHhhccCccCCceeEEecCcccchHHHHHHHHHhcccccccCCCHHHHHHhhHHHHhhhccCCccccccceeeeecccc
Confidence 99999999999999999999999999999999999888889999999999999999999999988888899999999999
Q ss_pred eeEEEeeCCeEEEccccCceEeeeccC
Q psy7262 811 SLGIETAGGVSYSQSQLGWLLIFYVCN 837 (840)
Q Consensus 811 s~gi~~~~~~~~~~~~~~~~~~~~~~~ 837 (840)
++||++.++.+.++.+.+..+.--++.
T Consensus 404 ~~gve~a~~~~~~~i~~~t~~P~~k~~ 430 (620)
T KOG0101|consen 404 SLGVETAGGVFTVLIPRNTSIPTKKTQ 430 (620)
T ss_pred cccccccCCcceeeeecccccceeeee
Confidence 999999999988888765555444443
No 15
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-58 Score=531.94 Aligned_cols=390 Identities=57% Similarity=0.841 Sum_probs=350.9
Q ss_pred CCcccc-ccceEEEEEEECC-eEEEEEcCCCCcccceEEEeeCC-cEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 336 PSHPVS-FITSALQGVFQHG-KVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g-~~~ii~~~~g~~~iPS~V~f~~~-~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
..+||| ||||||||+++++ .+.+++|..|.|.+||+|+|.++ ++++|..|..++..+|.+++..+|+++|+...
T Consensus 6 ~~iGIDlGTTNS~vA~~~~~~~~~vi~n~~g~r~~PSvv~f~~~~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~~--- 82 (579)
T COG0443 6 KAIGIDLGTTNSVVAVMRGGGLPKVIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVDNPENTIFSIKRKIGRGSN--- 82 (579)
T ss_pred eEEEEEcCCCcEEEEEEeCCCCceEecCCCCCcccceEEEECCCCCEEecHHHHHHhhhCCcceEEEEehhcCCCCC---
Confidence 467999 9999999999988 79999999999999999999966 59999999999999999999999999997611
Q ss_pred HHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 413 VQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 413 ~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
...+.+...+ +.++|+++.+++|++|++.++.+++..+ ..+|||||++
T Consensus 83 -----------------~~~~~~~~~~--~~~~~eeisa~~L~~lk~~ae~~lg~~v-------------~~~VItVPay 130 (579)
T COG0443 83 -----------------GLKISVEVDG--KKYTPEEISAMILTKLKEDAEAYLGEKV-------------TDAVITVPAY 130 (579)
T ss_pred -----------------CCcceeeeCC--eeeCHHHHHHHHHHHHHHHHHHhhCCCc-------------ceEEEEeCCC
Confidence 0011222333 7899999999999999999999999866 8999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|++.||+++++|++.|||+.+++++||+|||++|+++.. .+.+|||+|+||||+|+|++++.
T Consensus 131 F~d~qR~at~~A~~iaGl~vlrlinEPtAAAlayg~~~~-------~~~~vlV~DlGGGTfDvSll~~~----------- 192 (579)
T COG0443 131 FNDAQRQATKDAARIAGLNVLRLINEPTAAALAYGLDKG-------KEKTVLVYDLGGGTFDVSLLEIG----------- 192 (579)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEecchHHHHHHhHhccC-------CCcEEEEEEcCCCCEEEEEEEEc-----------
Confidence 999999999999999999999999999999999988765 67789999999999999888754
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
.+.+++++..++.++||++||.+|.+++
T Consensus 193 ----------------------------------------------------~g~~ev~at~gd~~LGGddfD~~l~~~~ 220 (579)
T COG0443 193 ----------------------------------------------------DGVFEVLATGGDNHLGGDDFDNALIDYL 220 (579)
T ss_pred ----------------------------------------------------CCEEEEeecCCCcccCchhHHHHHHHHH
Confidence 2357889999999999999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSL 732 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l 732 (840)
..+|..+.+.++..+++...+|..+||++|+.||...++.+.++....+.++...|+|++|++++.+++.++...+.+++
T Consensus 221 ~~~f~~~~~~d~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~~~~~~~~~~~~~~ltR~~~E~l~~dll~r~~~~~~~al 300 (579)
T COG0443 221 VMEFKGKGGIDLRSDKAALQRLREAAEKAKIELSSATQTSINLPSIGGDIDLLKELTRAKFEELILDLLERTIEPVEQAL 300 (579)
T ss_pred HHHhhccCCccccccHHHHHHHHHHHHHHHHHcccccccccchhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888899999999999999999999999999999998777766788999999999999999999999999999
Q ss_pred HHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEecccee
Q psy7262 733 RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSL 812 (840)
Q Consensus 733 ~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~s~ 812 (840)
.++++...+|+.|+||||++|+|.|++.+++.|+ .++....||+++||.|||++|+.+++... +++..|++|+++
T Consensus 301 ~~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~-~~~~~~inpdeava~GAa~qa~~l~~~~~----d~ll~Dv~plsl 375 (579)
T COG0443 301 KDAGLEKSDIDLVILVGGSTRIPAVQELVKEFFG-KEPEKSINPDEAVALGAAIQAAVLSGEVP----DVLLLDVIPLSL 375 (579)
T ss_pred HHcCCChhhCceEEEccceeccHHHHHHHHHHhC-ccccccCCccHHHHHHHHHHHHhhcCccc----CceEEeeeeecc
Confidence 9999999999999999999999999999999995 77888899999999999999999998432 889999999999
Q ss_pred EEEeeCCeEEEccccCceEeeec
Q psy7262 813 GIETAGGVSYSQSQLGWLLIFYV 835 (840)
Q Consensus 813 gi~~~~~~~~~~~~~~~~~~~~~ 835 (840)
|+++.++++.++++.+-.+...+
T Consensus 376 gie~~~~~~~~ii~rn~~iP~~~ 398 (579)
T COG0443 376 GIETLGGVRTPIIERNTTIPVKK 398 (579)
T ss_pred ccccCcchhhhHHhcCCCCCccc
Confidence 99999998888886554444333
No 16
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=3.6e-57 Score=527.36 Aligned_cols=377 Identities=33% Similarity=0.489 Sum_probs=311.2
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHHH
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 414 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~~ 414 (840)
.++||| |||||+||++.+|++++|+|..|++++||+|+|.++++++|..| +++++||++|+.+.+....
T Consensus 20 ~viGIDlGTT~S~va~~~~~~~~ii~n~~g~~~tPS~V~f~~~~~~vG~~A----------ti~~~KrliG~~~~~~~~~ 89 (595)
T PRK01433 20 IAVGIDFGTTNSLIAIATNRKVKVIKSIDDKELIPTTIDFTSNNFTIGNNK----------GLRSIKRLFGKTLKEILNT 89 (595)
T ss_pred eEEEEEcCcccEEEEEEeCCeeEEEECCCCCeecCeEEEEcCCCEEECchh----------hHHHHHHHhCCCchhhccc
Confidence 478999 99999999999999999999999999999999998889999987 7899999999987652111
Q ss_pred hhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCC
Q psy7262 415 ADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFN 494 (840)
Q Consensus 415 ~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~ 494 (840)
............ .+...+.+... +..++|+++.+++|++|++.|+.++|..+ .++|||||++|+
T Consensus 90 ~~~~~~~k~~~~-~~~~~~~~~~~--~~~~speei~a~iL~~lk~~ae~~lg~~v-------------~~aVITVPa~f~ 153 (595)
T PRK01433 90 PALFSLVKDYLD-VNSSELKLNFA--NKQLRIPEIAAEIFIYLKNQAEEQLKTNI-------------TKAVITVPAHFN 153 (595)
T ss_pred hhhHhhhhheee-cCCCeeEEEEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCc-------------ceEEEEECCCCC
Confidence 000000001111 12223334443 47899999999999999999999998765 899999999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeE
Q psy7262 495 DSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVL 574 (840)
Q Consensus 495 ~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~ 574 (840)
+.||+++++||+.|||+.+++++||+|||++|+.... .+..+||+|+||||+|+|++++.
T Consensus 154 ~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~-------~~~~vlV~DlGGGT~DvSi~~~~------------- 213 (595)
T PRK01433 154 DAARGEVMLAAKIAGFEVLRLIAEPTAAAYAYGLNKN-------QKGCYLVYDLGGGTFDVSILNIQ------------- 213 (595)
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcHHHHHHHhcccC-------CCCEEEEEECCCCcEEEEEEEEe-------------
Confidence 9999999999999999999999999999999976542 34578888888888888887643
Q ss_pred EEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHH
Q psy7262 575 IFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQ 654 (840)
Q Consensus 575 ~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~ 654 (840)
++.+++++..++..+||.+||.+|.+++.+
T Consensus 214 --------------------------------------------------~~~~~V~at~gd~~lGG~d~D~~l~~~~~~ 243 (595)
T PRK01433 214 --------------------------------------------------EGIFQVIATNGDNMLGGNDIDVVITQYLCN 243 (595)
T ss_pred --------------------------------------------------CCeEEEEEEcCCcccChHHHHHHHHHHHHH
Confidence 345678899999999999999999999997
Q ss_pred HHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7262 655 EFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRD 734 (840)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~~ 734 (840)
++... .+. +.+..||++|+.||....... ..+.|||++|+++++|+++++.++++++|++
T Consensus 244 ~~~~~------~~~----~~~~~~ekaK~~LS~~~~~~~----------~~~~itr~efe~l~~~l~~~~~~~i~~~L~~ 303 (595)
T PRK01433 244 KFDLP------NSI----DTLQLAKKAKETLTYKDSFNN----------DNISINKQTLEQLILPLVERTINIAQECLEQ 303 (595)
T ss_pred hcCCC------CCH----HHHHHHHHHHHhcCCCccccc----------ceEEEcHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 76321 122 233459999999998765321 1688999999999999999999999999999
Q ss_pred cCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccceeEE
Q psy7262 735 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGI 814 (840)
Q Consensus 735 a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~s~gi 814 (840)
++ ..+|+.|+||||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++. ..+++++|++|+++|+
T Consensus 304 a~--~~~Id~ViLvGGssriP~v~~~l~~~f-~~~~~~~~npdeaVA~GAAi~a~~l~~~----~~~~~l~Dv~p~slgi 376 (595)
T PRK01433 304 AG--NPNIDGVILVGGATRIPLIKDELYKAF-KVDILSDIDPDKAVVWGAALQAENLIAP----HTNSLLIDVVPLSLGM 376 (595)
T ss_pred cC--cccCcEEEEECCcccChhHHHHHHHHh-CCCceecCCchHHHHHHHHHHHHHhhCC----ccceEEEEecccceEE
Confidence 98 568999999999999999999999999 5667778899999999999999999862 2478899999999999
Q ss_pred EeeCCeEEEccccCceEeeec
Q psy7262 815 ETAGGVSYSQSQLGWLLIFYV 835 (840)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~ 835 (840)
++.+|.+.++++.+..++..+
T Consensus 377 ~~~~g~~~~ii~rnt~iP~~~ 397 (595)
T PRK01433 377 ELYGGIVEKIIMRNTPIPISV 397 (595)
T ss_pred EecCCEEEEEEECCCccccee
Confidence 999999999887776666543
No 17
>KOG0102|consensus
Probab=100.00 E-value=3.1e-58 Score=493.50 Aligned_cols=414 Identities=54% Similarity=0.797 Sum_probs=373.5
Q ss_pred ccCCCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEee-CCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCC
Q psy7262 333 NFIPSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFED 410 (840)
Q Consensus 333 ~~~~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~-~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~ 410 (840)
....++||| |||+|||++..++.+.++.|..|.|++||+|+|. +..+++|..|+++...+|+++++.-|+++|+.+.+
T Consensus 25 ~~~~vigidlgttnS~va~meg~~~kiienaegqrtTpsvva~~kdge~Lvg~~akrqav~n~~ntffatKrligRrf~d 104 (640)
T KOG0102|consen 25 VKGKVIGIDLGTTNSCVAVMEGKKPKIIENAEGQRTTPSVVAFTKDGERLVGMPAKRQAVTNPENTFFATKRLIGRRFDD 104 (640)
T ss_pred CCCceeeEeeeccceeEEEEeCCCceEeecccccccCCceEEEeccccEEecchhhhhhccCCCceEEEehhhhhhhccC
Confidence 345689999 9999999999999999999999999999999997 55999999999999999999999999999999999
Q ss_pred hHHHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeC
Q psy7262 411 ATVQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVP 490 (840)
Q Consensus 411 ~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVP 490 (840)
+.+++..+.+||.++. ..+..+.++. .+..++|.++.++.|.+++.+|+++++... ...|+|||
T Consensus 105 ~evq~~~k~vpyKiVk-~~ngdaw~e~--~G~~~spsqig~~vl~kmk~tae~yl~~~v-------------~~avvtvp 168 (640)
T KOG0102|consen 105 PEVQKDIKQVPYKIVK-ASNGDAWVEA--RGKQYSPSQIGAFVLMKMKETAEAYLGKKV-------------KNAVITVP 168 (640)
T ss_pred HHHHHHHHhCCcceEE-ccCCcEEEEe--CCeEecHHHHHHHHHHHHHHHHHHHcCchh-------------hheeeccH
Confidence 9999999999999987 4444555555 559999999999999999999999999866 89999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCC
Q psy7262 491 AYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGE 570 (840)
Q Consensus 491 a~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~ 570 (840)
+||++.||++..+|.++||++++++++||+|||+.|+++.. ....
T Consensus 169 AyfndsqRqaTkdag~iagl~vlrvineptaaalaygld~k-------~~g~---------------------------- 213 (640)
T KOG0102|consen 169 AYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKK-------EDGV---------------------------- 213 (640)
T ss_pred HHHhHHHHHHhHhhhhhccceeeccCCccchhHHhhccccc-------CCCc----------------------------
Confidence 99999999999999999999999999999999999988764 2234
Q ss_pred ceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHH
Q psy7262 571 RNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 650 (840)
Q Consensus 571 ~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~ 650 (840)
++|||+||||||+++..+.++.|++.+..++.++||++||..+.+
T Consensus 214 -----------------------------------iaV~dLgggtfdisilei~~gvfevksTngdtflggedfd~~~~~ 258 (640)
T KOG0102|consen 214 -----------------------------------IAVFDLGGGTFDISILEIEDGVFEVKSTNGDTHLGGEDFDNALVR 258 (640)
T ss_pred -----------------------------------eEEEEcCCceeeeeeehhccceeEEEeccCccccChhHHHHHHHH
Confidence 445555555555555566778899999999999999999999999
Q ss_pred HHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCC----eeeEEEEehHHHHHHHHHHHHHHHH
Q psy7262 651 HFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTME 726 (840)
Q Consensus 651 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~e~e~~~~~~i~~i~~ 726 (840)
++...|+...+.++..+.+++.||..++|++|+.||......+.++.+..+ ..+++++||.+|++++.++|++.++
T Consensus 259 ~~v~~fk~~~gidl~kd~~a~qrl~eaaEkaKielSs~~~tei~lp~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~ 338 (640)
T KOG0102|consen 259 FIVSEFKKEEGIDLTKDRMALQRLREAAEKAKIELSSRQQTEINLPFITADASGPKHLNIELTRGEFEELVPSLIARTIE 338 (640)
T ss_pred HHHHhhhcccCcchhhhHHHHHHHHHHHHhhhhhhhhcccceeccceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhh
Confidence 999999998899999999999999999999999999999999888876654 5688999999999999999999999
Q ss_pred HHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEE
Q psy7262 727 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLD 806 (840)
Q Consensus 727 ~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d 806 (840)
.+..+|++|++...+|+.|+|+||++|+|.+++.|++.| +.......||+++||.|||+++..+.+ .++++.+.|
T Consensus 339 p~~~aL~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~f-gk~p~~~vnPdeava~GAaiqggvl~g----eVkdvlLLd 413 (640)
T KOG0102|consen 339 PCKKALRDASLSSSDINEVILVGGMTRMPKVQSTVKELF-GKGPSKGVNPDEAVAGGAAIQGGVLSG----EVKDVLLLD 413 (640)
T ss_pred HHHHHHHhccCChhhhhhhhhhcchhhcHHHHHHHHHHh-CCCCCCCcCCcchhccchhhccchhhc----cccceeeee
Confidence 999999999999999999999999999999999999999 666667789999999999999999988 689999999
Q ss_pred eccceeEEEeeCCeEEEccccCceEeeeccC
Q psy7262 807 VTPLSLGIETAGGVSYSQSQLGWLLIFYVCN 837 (840)
Q Consensus 807 ~~~~s~gi~~~~~~~~~~~~~~~~~~~~~~~ 837 (840)
|.|+++|||+.||++-+.++.+-.|..-+..
T Consensus 414 VtpLsLgietlggvft~Li~rnttIptkksq 444 (640)
T KOG0102|consen 414 VTPLSLGIETLGGVFTKLIPRNTTIPTKKSQ 444 (640)
T ss_pred cchHHHHHHhhhhhheecccCCcccCchhhh
Confidence 9999999999999999999877666554443
No 18
>KOG0103|consensus
Probab=100.00 E-value=1.9e-57 Score=501.91 Aligned_cols=426 Identities=43% Similarity=0.657 Sum_probs=391.6
Q ss_pred CCccccccceEE-EEEEECCeEEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHHH
Q psy7262 336 PSHPVSFITSAL-QGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 414 (840)
Q Consensus 336 ~~~gIDGtT~s~-va~~~~g~~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~~ 414 (840)
+++|||+|..+| +|+.+.|.+++|.|+.++|.+|++|+|.++.|++|.+|..+...++.+++..+||++|+.+.++.++
T Consensus 2 svvG~D~Gn~nc~iavAr~~gIe~i~nd~Snr~TPa~vsfg~K~R~~G~aak~~~~~n~kntv~~~KRl~Gr~f~dP~~q 81 (727)
T KOG0103|consen 2 SVVGFDLGNENCYIAVARQGGIEVVANDYSNRETPAIVSFGPKNRFIGVAAKNQQTTNVKNTVSNFKRLIGRKFSDPEVQ 81 (727)
T ss_pred CceeeeccccceeeeeeccCCceeeeeccccccCcceeeeccccceeeeccccceeecccccchhhhhhhccccCChHhh
Confidence 388999555555 6888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCeeEee-cCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCC
Q psy7262 415 ADMKHWPFEVVS-DGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYF 493 (840)
Q Consensus 415 ~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~ 493 (840)
...+.+|+.++. .++...+.+.|.|+...++|++|+||||.+|++.++..+..++ .++||+||++|
T Consensus 82 ~~~~~~~~~vv~~~dg~vgi~v~ylge~~~ft~~Qv~Am~l~klk~~ae~~l~~~v-------------~DcvIavP~~F 148 (727)
T KOG0103|consen 82 REIKSLPRSVVQLKDGDVGIKVEYLGEKHPFTPEQVLAMLLTKLKATAEKNLKSPV-------------SDCVIAVPSYF 148 (727)
T ss_pred hcccccchheeecCCCCcceeehcccCCCCCChHHHHHHHHHHHHHHHHHhcCCCC-------------CCeeEeccccc
Confidence 999999999875 8999999999999999999999999999999999999887655 89999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCcee
Q psy7262 494 NDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNV 573 (840)
Q Consensus 494 ~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~ 573 (840)
++.||+++.+||+.|||+.+++++|-+|+|+.|+..+..-.
T Consensus 149 Td~qRravldAA~iagLn~lrLmnd~TA~Al~ygiyKtDLP--------------------------------------- 189 (727)
T KOG0103|consen 149 TDSQRRAVLDAARIAGLNPLRLMNDTTATALAYGIYKTDLP--------------------------------------- 189 (727)
T ss_pred cHHHHHHHHhHHhhcCccceeeeecchHhHhhcccccccCC---------------------------------------
Confidence 99999999999999999999999999999999988764211
Q ss_pred EEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHH
Q psy7262 574 LIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 653 (840)
Q Consensus 574 ~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 653 (840)
+....+++++.+|+|..++.+++..+..+.+.+++...+..+||++||++|.+|+.
T Consensus 190 ------------------------~~~ekpr~v~fvD~GHS~~q~si~aF~kG~lkvl~ta~D~~lGgr~fDe~L~~hfa 245 (727)
T KOG0103|consen 190 ------------------------ENEEKPRNVVFVDIGHSSYQVSIAAFTKGKLKVLATAFDRKLGGRDFDEALIDHFA 245 (727)
T ss_pred ------------------------CcccCcceEEEEecccccceeeeeeeccCcceeeeeecccccccchHHHHHHHHHH
Confidence 01133566888888888888888899999999999999999999999999999999
Q ss_pred HHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHH
Q psy7262 654 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLR 733 (840)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~ 733 (840)
.+|+.+++.+...++++..||...||+.|+.||++....++|+++.++.|.+-.|+|++|++++.|+++++...+..+|+
T Consensus 246 ~efk~kykidv~sn~kA~lRL~~~~EKlKK~lSAN~~~plNIEcfM~d~dvs~~i~ReEfEel~~plL~rv~~p~~~~l~ 325 (727)
T KOG0103|consen 246 KEFKTKYKIDVRSNAKAKLRLLAECEKLKKVLSANTELPLNIECFMNDKDVSSKIKREEFEELSAPLLERVEVPLLKALA 325 (727)
T ss_pred HHhccccccchhhchhHHHHHHHHHHHHHHHhhcCcCCCcchhheeecchhhhhccHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred HcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEeccceeE
Q psy7262 734 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLG 813 (840)
Q Consensus 734 ~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~~s~g 813 (840)
++++...+|+.|.+|||+||+|.|++.|.+.| +..+.+++|.++|||+||||.+|++++ .++++.+.++|+.||++.
T Consensus 326 d~~l~~edi~~VEiVGg~sripaike~Is~~F-gke~s~TlN~dEavarG~ALqcAIlSP--~frVRef~v~Di~pysIs 402 (727)
T KOG0103|consen 326 DAKLKVEDIHAVEIVGGLSRIPAIKEMISDFF-GKELSRTLNQDEAVARGAALQCAILSP--TFRVREFSVEDIVPYSIS 402 (727)
T ss_pred HhcCccccceeEEEecCcccchHHHHHHHHHh-CCcccccccHHHHHHHhHHHHHHhcCc--cccceecceecccceeEE
Confidence 99999999999999999999999999999999 889999999999999999999999999 899999999999999997
Q ss_pred EE--eeC---C----eEEEc--cccCceEeeeccCCCC
Q psy7262 814 IE--TAG---G----VSYSQ--SQLGWLLIFYVCNPFE 840 (840)
Q Consensus 814 i~--~~~---~----~~~~~--~~~~~~~~~~~~~~~~ 840 (840)
++ ..+ + +++.- +|..|.|+|+|++||.
T Consensus 403 ~~w~~~~ed~~~~~evF~~~~~~p~~K~lT~~Rk~~F~ 440 (727)
T KOG0103|consen 403 LRWVKQGEDGGSVTEVFPKGHPSPSVKLLTFNRKGPFT 440 (727)
T ss_pred EEeccccccCCCceeeecCCCCCCCceEEEEEecCceE
Confidence 76 221 1 12222 3678999999999994
No 19
>KOG0104|consensus
Probab=100.00 E-value=4.9e-51 Score=451.04 Aligned_cols=414 Identities=33% Similarity=0.509 Sum_probs=368.6
Q ss_pred CCCcccc-ccceEEEEEEECCe-EEEEEcCCCCcccceEEEeeCCcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 335 IPSHPVS-FITSALQGVFQHGK-VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 335 ~~~~gID-GtT~s~va~~~~g~-~~ii~~~~g~~~iPS~V~f~~~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
..+++|| |+-+.-|+++.||- .+|+.|..++|++|++|+|.+++|+||.+|.....++|+.++..++.+||++..++.
T Consensus 22 ~AvmsVDlGse~~Kv~vVkPGvPmeIvLn~esrRKtp~~vafk~~eR~fg~~A~~ma~r~P~~~~~~l~~llgk~~~~~~ 101 (902)
T KOG0104|consen 22 LAVMSVDLGSEWIKVAVVKPGVPMEIVLNKESRRKTPSIVAFKGGERIFGEAAASMATRFPQSTYRQLKDLLGKSLDDPT 101 (902)
T ss_pred hhheeeecccceeEEEEecCCCCeEEeechhhcccCcceEEecCCceehhhhhhhhhhcCcHHHHHHHHHHhCcccCCcH
Confidence 4477999 88888899999986 578999999999999999999999999999999999999999999999999999988
Q ss_pred HHhhcccCCee-EeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCC
Q psy7262 413 VQADMKHWPFE-VVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPA 491 (840)
Q Consensus 413 ~~~~~~~~p~~-~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa 491 (840)
+....+++||. ++.+..+..+.+.+++ ...+++++++||+|.+.+..|+.+...++ .++|||||.
T Consensus 102 v~ly~~~~p~~e~v~d~~rstV~F~i~d-~~~ysvEellAMil~~a~~~ae~~a~~~I-------------kd~ViTVP~ 167 (902)
T KOG0104|consen 102 VDLYQKRFPFFELVEDPQRSTVVFKISD-QEEYSVEELLAMILQYAKSLAEEYAKQPI-------------KDMVITVPP 167 (902)
T ss_pred HHHHHhcCCceeecccCccceEEEEeCC-ccccCHHHHHHHHHHHHHHHHHHHHhcch-------------hheEEeCCc
Confidence 88888888875 4444467777777666 68899999999999999999999988765 899999999
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCc
Q psy7262 492 YFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGER 571 (840)
Q Consensus 492 ~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~ 571 (840)
+|++.+|+++.+||++||++.+.+|+|..|||+.|++.++ ........+++|+|+|.|.|-.+++.+..---...
T Consensus 168 ~F~qaeR~all~Aa~iagl~vLqLind~~a~Al~ygv~rR--k~i~~~~q~~i~YDMGs~sT~Ativsy~~v~~k~~--- 242 (902)
T KOG0104|consen 168 FFNQAERRALLQAAQIAGLNVLQLINDGTAVALNYGVFRR--KEINETPQHYIFYDMGSGSTSATIVSYQLVKTKEQ--- 242 (902)
T ss_pred ccCHHHHHHHHHHHHhcCchhhhhhccchHHHhhhhhhcc--ccCCCCceEEEEEecCCCceeEEEEEEEeeccccc---
Confidence 9999999999999999999999999999999999999875 33445678889999999999888876541000000
Q ss_pred eeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHH
Q psy7262 572 NVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 651 (840)
Q Consensus 572 ~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 651 (840)
| .....++++..+.+..+||..+..+|.++
T Consensus 243 ----------------------------------------g----------~~~p~i~~~gvGfd~tLGG~e~~~rLr~~ 272 (902)
T KOG0104|consen 243 ----------------------------------------G----------GKQPQIQVLGVGFDRTLGGLEMTMRLRDH 272 (902)
T ss_pred ----------------------------------------c----------CccceEEEEeeccCCccchHHHHHHHHHH
Confidence 0 01235677788888999999999999999
Q ss_pred HHHHHHHhccC--CccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHH
Q psy7262 652 FVQEFKRKYKK--DLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVE 729 (840)
Q Consensus 652 l~~~~~~~~~~--~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~ 729 (840)
|.+.|.+.++. ++..++|++.+|.++|+++|..||.+.++...|+++.++.|+...|||++|+++|+++..++..+|.
T Consensus 273 l~~~F~~~~k~~~dv~~nprAmaKl~keA~R~K~vLSANsea~aqIEsL~ddiDFr~kvTRe~fEelc~Dl~~r~~~Pi~ 352 (902)
T KOG0104|consen 273 LANEFNEQHKTKKDVHTNPRAMAKLNKEAERLKQVLSANSEAFAQIESLIDDIDFRLKVTREEFEELCADLEERIVEPIN 352 (902)
T ss_pred HHHHHHHhcCCccccccCHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHhhccccccceeHHHHHHHHHHHHHhhhhhHH
Confidence 99999877654 5778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCCCCccccceEEEEecc
Q psy7262 730 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTP 809 (840)
Q Consensus 730 ~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~d~~~ 809 (840)
++|..++++.++|+.|+|.||++|+|.||+.|.+..+..++...+|.++|+++||+++||.|+. +|.++.+.+.|.++
T Consensus 353 dAl~~a~l~ldeIn~ViL~Gg~TRVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LSk--sFKvKpf~V~D~~~ 430 (902)
T KOG0104|consen 353 DALKKAQLSLDEINQVILFGGATRVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLSK--SFKVKPFNVVDASV 430 (902)
T ss_pred HHHHhcCCChhhhheeEEecCcccCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhcc--cccccceeeeeccc
Confidence 9999999999999999999999999999999999998889999999999999999999999997 99999999999999
Q ss_pred ceeEEEeeCC
Q psy7262 810 LSLGIETAGG 819 (840)
Q Consensus 810 ~s~gi~~~~~ 819 (840)
|+|-++-.+.
T Consensus 431 yp~~v~f~~~ 440 (902)
T KOG0104|consen 431 YPYLVEFETE 440 (902)
T ss_pred ccEEEEeccC
Confidence 9888776654
No 20
>PRK11678 putative chaperone; Provisional
Probab=100.00 E-value=1.7e-49 Score=447.79 Aligned_cols=343 Identities=23% Similarity=0.312 Sum_probs=281.3
Q ss_pred Ccccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEee----------------------------------------
Q psy7262 337 SHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFT---------------------------------------- 375 (840)
Q Consensus 337 ~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~---------------------------------------- 375 (840)
++||| |||||+||++++|++++|+++.|++.+||+|+|.
T Consensus 2 ~iGID~GTtNs~va~~~~~~~~li~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T PRK11678 2 FIGFDYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDIDV 81 (450)
T ss_pred eEEEecCccceeeEEeeCCceEEEEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhcccccccc
Confidence 46999 9999999999999999999999999999999994
Q ss_pred -CCcEEEcHHHHHHHHhCcCch--hhhhhHhcCCCCCChHHHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHH
Q psy7262 376 -DTERLIGDAAKNQVAMNPNNT--IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSM 452 (840)
Q Consensus 376 -~~~~~~G~~A~~~~~~~p~~~--i~~~K~llg~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~ 452 (840)
++..++|.+|+.++..+|..+ +.++|++||...... .....+++++++
T Consensus 82 ~~~~~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~-----------------------------~~~~~~e~l~a~ 132 (450)
T PRK11678 82 TAQSVFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKP-----------------------------QQVALFEDLVCA 132 (450)
T ss_pred cccccchhHHHHHhhccCCCCceEEecchhhhccCCCCc-----------------------------cceeCHHHHHHH
Confidence 446789999999988888877 789999999653110 122348899999
Q ss_pred HHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCC-----HHHHHH---HHHHHHHcCCcEEEeecchHHHHH
Q psy7262 453 VLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFN-----DSQRQA---TKDSGTIAGLNVLRIINEPTAAAI 524 (840)
Q Consensus 453 ~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~-----~~~r~~---l~~Aa~~AG~~~v~~v~Ep~AAAl 524 (840)
+|++|++.++.++|.++ .++|||||++|+ +.||++ |++||+.|||+.+.|++||+|||+
T Consensus 133 iL~~lk~~ae~~~g~~v-------------~~~VItvPa~F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl 199 (450)
T PRK11678 133 MMLHIKQQAEAQLQAAI-------------TQAVIGRPVNFQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGL 199 (450)
T ss_pred HHHHHHHHHHHHhCCCC-------------CcEEEEECCccccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHH
Confidence 99999999999988765 899999999998 777765 799999999999999999999999
Q ss_pred HhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCc
Q psy7262 525 AYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGER 604 (840)
Q Consensus 525 ~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~ 604 (840)
+|+... ..++++||+|+||||+|+|+++++++...
T Consensus 200 ~y~~~~-------~~~~~vlV~D~GGGT~D~Svv~~~~~~~~-------------------------------------- 234 (450)
T PRK11678 200 DFEATL-------TEEKRVLVVDIGGGTTDCSMLLMGPSWRG-------------------------------------- 234 (450)
T ss_pred Hhcccc-------CCCCeEEEEEeCCCeEEEEEEEecCcccc--------------------------------------
Confidence 996532 25788999999999999999987532000
Q ss_pred eEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHH-HHHHHHHHHh----ccCC--------------c-
Q psy7262 605 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-NHFVQEFKRK----YKKD--------------L- 664 (840)
Q Consensus 605 ~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~-~~l~~~~~~~----~~~~--------------~- 664 (840)
......++++..+ ..+||.+||..|+ +++...+... .+.+ +
T Consensus 235 ------------------~~~r~~~vla~~G-~~lGG~DfD~~L~~~~~~~~fg~~~~~~~g~~~p~~~~~~~~~~~~i~ 295 (450)
T PRK11678 235 ------------------RADRSASLLGHSG-QRIGGNDLDIALAFKQLMPLLGMGSETEKGIALPSLPFWNAVAINDVP 295 (450)
T ss_pred ------------------cCCcceeEEecCC-CCCChHHHHHHHHHHHHHHHhhhchhhccCCcCcchhhhhhhhhhccc
Confidence 0112345677776 6899999999998 5777766411 1100 0
Q ss_pred --------------------cccHHHH------------HHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHH
Q psy7262 665 --------------------TTNKRAL------------RRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRAR 712 (840)
Q Consensus 665 --------------------~~~~~~~------------~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e 712 (840)
..+++.. .+|+.+||++|+.||..+.+.+.++.+.. ++.+.|+|++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~rl~~l~~~~~~~~L~~~aE~aK~~LS~~~~a~i~~~~~~~--~~~~~ItR~e 373 (450)
T PRK11678 296 AQSDFYSLANGRLLNDLIRDAREPEKVARLLKVWRQRLSYRLVRSAEEAKIALSDQAETRASLDFISD--GLATEISQQG 373 (450)
T ss_pred hhhhhhhhhhHHHHHHHhhccccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHcCCCCceEEEecccCC--CcceeeCHHH
Confidence 0122222 36889999999999999999998886544 5779999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHH
Q psy7262 713 FEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 791 (840)
Q Consensus 713 ~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l 791 (840)
|+++++++++++.++|+++|+++++. ++.|+||||+|++|.|++.|++.||..++. ..+|..+||.|+|++|..+
T Consensus 374 fe~ii~~~l~ri~~~i~~~L~~a~~~---~d~VvLvGGsSriP~V~~~l~~~fg~~~v~-~g~~~~sVa~Gla~~a~~~ 448 (450)
T PRK11678 374 LEEAISQPLARILELVQLALDQAQVK---PDVIYLTGGSARSPLIRAALAQQLPGIPIV-GGDDFGSVTAGLARWAQVV 448 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC---CCEEEEcCcccchHHHHHHHHHHCCCCcEE-eCCCcchHHHHHHHHHHhh
Confidence 99999999999999999999999876 479999999999999999999999777665 4599999999999999754
No 21
>KOG0100|consensus
Probab=100.00 E-value=1.2e-38 Score=330.27 Aligned_cols=210 Identities=64% Similarity=0.996 Sum_probs=203.9
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|++||||||.||++|++.|+|+.|+|..+.|++|+||+...++|+.||+|.+.||||+|+|.|+|+|||++|.||||+|+
T Consensus 440 MTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFevDangiL~Vs 519 (663)
T KOG0100|consen 440 MTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVDANGILQVS 519 (663)
T ss_pred eeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEEEEccCceEEEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccc-hhhhccCCHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVED-EKLKDKISDAERT 159 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~-~~~~~~~~~~e~~ 159 (840)
+.++.++++..++|++..++|++++|++|++++++|+++|+..+++.+++|+||+|.|.+++.+.+ +++...+++++++
T Consensus 520 AeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~Kl~~edKe 599 (663)
T KOG0100|consen 520 AEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGKLSDEDKE 599 (663)
T ss_pred eeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhcccCChhHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999986 4699999999999
Q ss_pred HHHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy7262 160 QILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGGAPV 210 (840)
Q Consensus 160 ~l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~~~~~~~ 210 (840)
.++.++++..+||+++.++++++|++++++|...+.||..++|+..++++.
T Consensus 600 ~~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~PiisklY~~ag~~~~ 650 (663)
T KOG0100|consen 600 TIEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISKLYGGAGGAPE 650 (663)
T ss_pred HHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Confidence 999999999999999999999999999999999999999999997666653
No 22
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=100.00 E-value=9.1e-33 Score=304.81 Aligned_cols=307 Identities=21% Similarity=0.324 Sum_probs=229.4
Q ss_pred cccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCC---cEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHH
Q psy7262 338 HPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDT---ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 413 (840)
Q Consensus 338 ~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~---~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~ 413 (840)
+||| |||++.++.. ++..++. .||+|+|+.+ -..+|.+|.....+.|.+.... +
T Consensus 6 ~gIDlGt~~~~i~~~--~~~~v~~-------~psvv~~~~~~~~i~~vG~~A~~~~~~~p~~~~~~------~------- 63 (336)
T PRK13928 6 IGIDLGTANVLVYVK--GKGIVLN-------EPSVVAIDKNTNKVLAVGEEARRMVGRTPGNIVAI------R------- 63 (336)
T ss_pred eEEEcccccEEEEEC--CCCEEEc-------cCCEEEEECCCCeEEEecHHHHHhhhcCCCCEEEE------c-------
Confidence 7999 7777777665 4444443 5999999943 3479999988866666654421 1
Q ss_pred HhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCC
Q psy7262 414 QADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYF 493 (840)
Q Consensus 414 ~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~ 493 (840)
|+. ...+...++...+|+++.+.+...... ....+|+|||++|
T Consensus 64 -------pi~-----------------~G~i~d~~~~~~~l~~~~~~~~~~~~~-------------~~p~~vitvP~~~ 106 (336)
T PRK13928 64 -------PLR-----------------DGVIADYDVTEKMLKYFINKACGKRFF-------------SKPRIMICIPTGI 106 (336)
T ss_pred -------cCC-----------------CCeEecHHHHHHHHHHHHHHHhccCCC-------------CCCeEEEEeCCCC
Confidence 110 011223366777788877554221111 1147999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCcee
Q psy7262 494 NDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNV 573 (840)
Q Consensus 494 ~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~ 573 (840)
+..+|+++++|++.||++.+.+++||.|||++|+.... .+..++|+|+||||||+++++.+..
T Consensus 107 ~~~~r~~~~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~-------~~~~~lVvDiGggttdvsvv~~g~~---------- 169 (336)
T PRK13928 107 TSVEKRAVREAAEQAGAKKVYLIEEPLAAAIGAGLDIS-------QPSGNMVVDIGGGTTDIAVLSLGGI---------- 169 (336)
T ss_pred CHHHHHHHHHHHHHcCCCceEecccHHHHHHHcCCccc-------CCCeEEEEEeCCCeEEEEEEEeCCE----------
Confidence 99999999999999999999999999999999976432 4566899999999999999875320
Q ss_pred EEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHH
Q psy7262 574 LIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 653 (840)
Q Consensus 574 ~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 653 (840)
...++..+||.+||..|++++.
T Consensus 170 ----------------------------------------------------------~~~~~~~lGG~did~~i~~~l~ 191 (336)
T PRK13928 170 ----------------------------------------------------------VTSSSIKVAGDKFDEAIIRYIR 191 (336)
T ss_pred ----------------------------------------------------------EEeCCcCCHHHHHHHHHHHHHH
Confidence 0112468999999999999998
Q ss_pred HHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCC----eeEEEEec--ccCCeeeEEEEehHHHHHHHHHHHHHHHHH
Q psy7262 654 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST----QASIEIDS--LFEGVDFYTSITRARFEELNADLFRGTMEP 727 (840)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----~~~i~i~~--~~~~~~~~~~itr~e~e~~~~~~i~~i~~~ 727 (840)
++++.... ...||++|+.++... ...+.+.. ...+.+..+.|++++|++++.+.++++.+.
T Consensus 192 ~~~~~~~~-------------~~~ae~lK~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~i~~~~~~eii~~~~~~i~~~ 258 (336)
T PRK13928 192 KKYKLLIG-------------ERTAEEIKIKIGTAFPGAREEEMEIRGRDLVTGLPKTITVTSEEIREALKEPVSAIVQA 258 (336)
T ss_pred HHhchhcC-------------HHHHHHHHHHhcccccccCCcEEEEecccccCCCceEEEECHHHHHHHHHHHHHHHHHH
Confidence 66542111 246889999886531 23333321 233456678999999999999999999999
Q ss_pred HHHHHHHcC--CCccCcc-EEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHc
Q psy7262 728 VEKSLRDAK--MDKAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 792 (840)
Q Consensus 728 i~~~l~~a~--~~~~~Id-~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~ 792 (840)
|.+.|+.++ +....++ .|+|+||+|++|.|++.+++.| +.++....||++|||+|||+++..+.
T Consensus 259 i~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipgi~e~l~~~~-~~~v~~~~~P~~ava~Gaa~~~~~~~ 325 (336)
T PRK13928 259 VKSVLERTPPELSADIIDRGIIMTGGGALLHGLDKLLAEET-KVPVYIAEDPISCVALGTGKMLENID 325 (336)
T ss_pred HHHHHHhCCccccHhhcCCCEEEECcccchhhHHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhchH
Confidence 999999986 4455677 7999999999999999999999 67787888999999999999987643
No 23
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=100.00 E-value=1.8e-32 Score=301.49 Aligned_cols=306 Identities=21% Similarity=0.345 Sum_probs=233.9
Q ss_pred Ccccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCC-c--EEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 337 SHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDT-E--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 337 ~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~-~--~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
.+||| |||++. ++.+++.. +.|+ ||+|+|+++ . .++|.+|..+..+.|.++... + +..+
T Consensus 6 ~~giDlGt~~~~--i~~~~~~~-~~~~------ps~va~~~~~~~~~~vG~~A~~~~~~~p~~~~~~--~----pi~~-- 68 (335)
T PRK13929 6 EIGIDLGTANIL--VYSKNKGI-ILNE------PSVVAVDTETKAVLAIGTEAKNMIGKTPGKIVAV--R----PMKD-- 68 (335)
T ss_pred eEEEEcccccEE--EEECCCcE-EecC------CcEEEEECCCCeEEEeCHHHHHhhhcCCCcEEEE--e----cCCC--
Confidence 47999 777765 45555543 4453 999999843 2 579999999988888876653 1 1100
Q ss_pred HHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 413 VQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 413 ~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
..+.--++.+.+|++++..++..++... ....+|+|||++
T Consensus 69 -----------------------------G~I~d~d~~~~~l~~~~~~~~~~l~~~~-----------~~~~vvitvP~~ 108 (335)
T PRK13929 69 -----------------------------GVIADYDMTTDLLKQIMKKAGKNIGMTF-----------RKPNVVVCTPSG 108 (335)
T ss_pred -----------------------------CccCCHHHHHHHHHHHHHHHHHhcCCCC-----------CCCeEEEEcCCC
Confidence 0111227889999999998877665432 113799999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|+..+|+++.+|++.||++.+.+++||.|||++|..... .+..++|+|+||||||+++++.++-
T Consensus 109 ~~~~~R~~l~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~-------~~~~~lvvDiG~gtt~v~vi~~~~~--------- 172 (335)
T PRK13929 109 STAVERRAISDAVKNCGAKNVHLIEEPVAAAIGADLPVD-------EPVANVVVDIGGGTTEVAIISFGGV--------- 172 (335)
T ss_pred CCHHHHHHHHHHHHHcCCCeeEeecCHHHHHHhcCCCcC-------CCceEEEEEeCCCeEEEEEEEeCCE---------
Confidence 999999999999999999999999999999999865422 4567899999999999999864320
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
...+...+||.+||..|.+++
T Consensus 173 -----------------------------------------------------------~~~~~~~~GG~~id~~l~~~l 193 (335)
T PRK13929 173 -----------------------------------------------------------VSCHSIRIGGDQLDEDIVSFV 193 (335)
T ss_pred -----------------------------------------------------------EEecCcCCHHHHHHHHHHHHH
Confidence 011235799999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCC----eeEEEEec--ccCCeeeEEEEehHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST----QASIEIDS--LFEGVDFYTSITRARFEELNADLFRGTME 726 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----~~~i~i~~--~~~~~~~~~~itr~e~e~~~~~~i~~i~~ 726 (840)
.+.+. ... . ...||++|+.++... ...+.+.. ...+.+..+.+++++|++++.+.+.++.+
T Consensus 194 ~~~~~----~~~--~-------~~~AE~iK~~l~~~~~~~~~~~~~v~g~~~~~~~p~~i~i~~~~~~~~i~~~l~~i~~ 260 (335)
T PRK13929 194 RKKYN----LLI--G-------ERTAEQVKMEIGYALIEHEPETMEVRGRDLVTGLPKTITLESKEIQGAMRESLLHILE 260 (335)
T ss_pred HHHhC----cCc--C-------HHHHHHHHHHHcCCCCCCCCceEEEeCCccCCCCCeEEEEcHHHHHHHHHHHHHHHHH
Confidence 76442 111 1 247999999998632 22233321 22345568999999999999999999999
Q ss_pred HHHHHHHHcCCC--ccCcc-EEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHH
Q psy7262 727 PVEKSLRDAKMD--KAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 727 ~i~~~l~~a~~~--~~~Id-~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a 788 (840)
.|.+.|+++... ...++ .|+|+||+|++|.+.+.+++.| +.++....||+++||.||+..-
T Consensus 261 ~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~e~l~~~~-~~~v~~~~~P~~~Va~Ga~~~~ 324 (335)
T PRK13929 261 AIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSEEI-VVPVHVAANPLESVAIGTGRSL 324 (335)
T ss_pred HHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHHHHHHHHH-CCCceeCCCHHHHHHHHHHHHH
Confidence 999999998643 35677 6999999999999999999999 6778888899999999999764
No 24
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=100.00 E-value=8.2e-31 Score=289.51 Aligned_cols=306 Identities=23% Similarity=0.352 Sum_probs=220.7
Q ss_pred Ccccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCC---cEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 337 SHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDT---ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 337 ~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~---~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
.+||| ||+++.+.. .|+..++ .+||+|+|.++ ..++|.+|.....+.|.++....
T Consensus 7 ~igIDlGt~~~~i~~--~~~~~~~-------~~ps~v~~~~~~~~~~~vG~~a~~~~~~~~~~~~~~~------------ 65 (334)
T PRK13927 7 DLGIDLGTANTLVYV--KGKGIVL-------NEPSVVAIRTDTKKVLAVGEEAKQMLGRTPGNIVAIR------------ 65 (334)
T ss_pred eeEEEcCcceEEEEE--CCCcEEE-------ecCCEEEEECCCCeEEEecHHHHHHhhcCCCCEEEEe------------
Confidence 36999 777777633 2332233 27999999844 24899999988766666543221
Q ss_pred HHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 413 VQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 413 ~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
|+. + ..+.--+....+|+++.......... . ..+|+|+|++
T Consensus 66 --------pi~----~-------------G~i~d~~~~~~ll~~~~~~~~~~~~~-~-------------~~~vi~vP~~ 106 (334)
T PRK13927 66 --------PMK----D-------------GVIADFDVTEKMLKYFIKKVHKNFRP-S-------------PRVVICVPSG 106 (334)
T ss_pred --------cCC----C-------------CeecCHHHHHHHHHHHHHHHhhccCC-C-------------CcEEEEeCCC
Confidence 110 0 00000134455666655444322111 0 3799999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|++.+|+++++|++.||++.+.+++||.|||++|+.... .+..++|+|+||||||+++++.++.
T Consensus 107 ~~~~~r~~~~~a~~~ag~~~~~li~ep~aaa~~~g~~~~-------~~~~~lvvDiGggttdvs~v~~~~~--------- 170 (334)
T PRK13927 107 ITEVERRAVRESALGAGAREVYLIEEPMAAAIGAGLPVT-------EPTGSMVVDIGGGTTEVAVISLGGI--------- 170 (334)
T ss_pred CCHHHHHHHHHHHHHcCCCeeccCCChHHHHHHcCCccc-------CCCeEEEEEeCCCeEEEEEEecCCe---------
Confidence 999999999999999999999999999999999965432 4567899999999999999865321
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
...+...+||.+||+.|.+++
T Consensus 171 -----------------------------------------------------------~~~~~~~lGG~~id~~l~~~l 191 (334)
T PRK13927 171 -----------------------------------------------------------VYSKSVRVGGDKFDEAIINYV 191 (334)
T ss_pred -----------------------------------------------------------EeeCCcCChHHHHHHHHHHHH
Confidence 011225699999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCe----eEEEEe--cccCCeeeEEEEehHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ----ASIEID--SLFEGVDFYTSITRARFEELNADLFRGTME 726 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----~~i~i~--~~~~~~~~~~~itr~e~e~~~~~~i~~i~~ 726 (840)
.+.+. ... . ...+|++|+.++.... ..+.+. ....+.+..+.|+|++|++++.+.++++.+
T Consensus 192 ~~~~~----~~~--~-------~~~ae~iK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~ 258 (334)
T PRK13927 192 RRNYN----LLI--G-------ERTAERIKIEIGSAYPGDEVLEMEVRGRDLVTGLPKTITISSNEIREALQEPLSAIVE 258 (334)
T ss_pred HHHhC----cCc--C-------HHHHHHHHHHhhccCCCCCCceEEEeCcccCCCCCeEEEECHHHHHHHHHHHHHHHHH
Confidence 76542 111 1 2368899999875322 223332 223445567899999999999999999999
Q ss_pred HHHHHHHHcCCC--ccCcc-EEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHH
Q psy7262 727 PVEKSLRDAKMD--KAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 791 (840)
Q Consensus 727 ~i~~~l~~a~~~--~~~Id-~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l 791 (840)
.|.++|+++... ...++ .|+|+||+|++|.+++.|++.| +.++....+|+++||+||++++..+
T Consensus 259 ~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l~~~~-~~~v~~~~~P~~ava~Ga~~~~~~~ 325 (334)
T PRK13927 259 AVKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLLSEET-GLPVHVAEDPLTCVARGTGKALENI 325 (334)
T ss_pred HHHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHHHHHH-CCCcEecCCHHHHHHHHHHHHHhhH
Confidence 999999988643 23344 5999999999999999999999 6778888899999999999998653
No 25
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=99.97 E-value=5.8e-30 Score=282.28 Aligned_cols=305 Identities=24% Similarity=0.333 Sum_probs=218.5
Q ss_pred cccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeCC-----c--EEEcHHHHHHHHhCcCchhhhhhHhcCCCCC
Q psy7262 338 HPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTDT-----E--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFE 409 (840)
Q Consensus 338 ~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~~-----~--~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~ 409 (840)
+||| |||+|.+++...|. ++ ..||+|+|.++ + .++|.+|.....+.|.++.. ++-+...
T Consensus 5 ~giDlGt~~s~i~~~~~~~--~~-------~~psvv~~~~~~~~~~~~~~~vG~~A~~~~~~~~~~~~~--~~pi~~G-- 71 (333)
T TIGR00904 5 IGIDLGTANTLVYVKGRGI--VL-------NEPSVVAIRTDRDAKTKSILAVGHEAKEMLGKTPGNIVA--IRPMKDG-- 71 (333)
T ss_pred eEEecCcceEEEEECCCCE--EE-------ecCCEEEEecCCCCCCCeEEEEhHHHHHhhhcCCCCEEE--EecCCCC--
Confidence 7999 88888876643332 33 37999999843 3 67999998876665655431 2211100
Q ss_pred ChHHHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEee
Q psy7262 410 DATVQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITV 489 (840)
Q Consensus 410 ~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitV 489 (840)
.... -+....+++|+........+.. . ..+|+||
T Consensus 72 --------------------------------~i~d-~~~~~~~~~~~l~~~~~~~~~~------------~-~~~vitv 105 (333)
T TIGR00904 72 --------------------------------VIAD-FEVTEKMIKYFIKQVHSRKSFF------------K-PRIVICV 105 (333)
T ss_pred --------------------------------EEEc-HHHHHHHHHHHHHHHhcccccC------------C-CcEEEEe
Confidence 0001 1344455555554433211111 0 3799999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCC
Q psy7262 490 PAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSG 569 (840)
Q Consensus 490 Pa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g 569 (840)
|++|+..+|+++++|++.||++.+.+++||.|||++|+.... .+..++|+|+||||||+++++.++.+
T Consensus 106 P~~~~~~~r~~~~~~~~~ag~~~~~li~ep~aaa~~~g~~~~-------~~~~~lVvDiG~gttdvs~v~~~~~~----- 173 (333)
T TIGR00904 106 PSGITPVERRAVKESALSAGAREVYLIEEPMAAAIGAGLPVE-------EPTGSMVVDIGGGTTEVAVISLGGIV----- 173 (333)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHhcCCccc-------CCceEEEEEcCCCeEEEEEEEeCCEE-----
Confidence 999999999999999999999999999999999999865322 45678999999999999998754210
Q ss_pred CceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHH
Q psy7262 570 ERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 649 (840)
Q Consensus 570 ~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~ 649 (840)
..+...+||.+||+.|.
T Consensus 174 ---------------------------------------------------------------~~~~~~lGG~did~~l~ 190 (333)
T TIGR00904 174 ---------------------------------------------------------------VSRSIRVGGDEFDEAII 190 (333)
T ss_pred ---------------------------------------------------------------ecCCccchHHHHHHHHH
Confidence 11235699999999999
Q ss_pred HHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCe-----eEEEEec--ccCCeeeEEEEehHHHHHHHHHHHH
Q psy7262 650 NHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ-----ASIEIDS--LFEGVDFYTSITRARFEELNADLFR 722 (840)
Q Consensus 650 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----~~i~i~~--~~~~~~~~~~itr~e~e~~~~~~i~ 722 (840)
+++.+.+. ... . ...||++|+.++.... ..+.+.. ...+......|+++++.+++.+.++
T Consensus 191 ~~l~~~~~----~~~--~-------~~~ae~lK~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~ 257 (333)
T TIGR00904 191 NYIRRTYN----LLI--G-------EQTAERIKIEIGSAYPLNDEPRKMEVRGRDLVTGLPRTIEITSVEVREALQEPVN 257 (333)
T ss_pred HHHHHHhc----ccC--C-------HHHHHHHHHHHhccccccccccceeecCccccCCCCeEEEECHHHHHHHHHHHHH
Confidence 99876542 111 1 2478999999875322 1222221 1122344578999999999999999
Q ss_pred HHHHHHHHHHHHcCCCc-cCc-c-EEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHH
Q psy7262 723 GTMEPVEKSLRDAKMDK-AQI-H-DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 723 ~i~~~i~~~l~~a~~~~-~~I-d-~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
++.+.+.+.++.+.... .++ + .|+|+||+|++|.++++|++.| +.++....||+++||.||++++..
T Consensus 258 ~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GGss~ipgl~e~l~~~~-~~~v~~~~~P~~~va~Ga~~~~~~ 327 (333)
T TIGR00904 258 QIVEAVKRTLEKTPPELAADIVERGIVLTGGGALLRNLDKLLSKET-GLPVIVADDPLLCVAKGTGKALED 327 (333)
T ss_pred HHHHHHHHHHHhCCchhhhhhccCCEEEECcccchhhHHHHHHHHH-CCCceecCChHHHHHHHHHHHHhC
Confidence 99999999999876432 233 3 6999999999999999999999 778888889999999999998754
No 26
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=99.97 E-value=1.2e-29 Score=280.50 Aligned_cols=306 Identities=23% Similarity=0.325 Sum_probs=222.3
Q ss_pred Ccccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeC---CcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChH
Q psy7262 337 SHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTD---TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 412 (840)
Q Consensus 337 ~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~---~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~ 412 (840)
.+||| ||+++.++.+..+ + ++ .+||+|+|.+ +..++|.+|.......|.+... ++
T Consensus 10 ~vgiDlGt~~t~i~~~~~~-~-~~-------~~ps~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~--~~---------- 68 (335)
T PRK13930 10 DIGIDLGTANTLVYVKGKG-I-VL-------NEPSVVAIDTKTGKVLAVGEEAKEMLGRTPGNIEA--IR---------- 68 (335)
T ss_pred ceEEEcCCCcEEEEECCCC-E-EE-------ecCCEEEEECCCCeEEEEcHHHHHhhhcCCCCeEE--ee----------
Confidence 36999 8888877776332 2 22 2599999984 2468999998876555544221 11
Q ss_pred HHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCC
Q psy7262 413 VQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAY 492 (840)
Q Consensus 413 ~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~ 492 (840)
|+. + ..+..-+....+|+++++.+....... ...+|+|+|++
T Consensus 69 --------pi~----~-------------G~i~d~~~~e~ll~~~~~~~~~~~~~~-------------~~~vvit~P~~ 110 (335)
T PRK13930 69 --------PLK----D-------------GVIADFEATEAMLRYFIKKARGRRFFR-------------KPRIVICVPSG 110 (335)
T ss_pred --------cCC----C-------------CeEcCHHHHHHHHHHHHHHHhhcccCC-------------CCcEEEEECCC
Confidence 111 0 111112557777777776554322211 26899999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCce
Q psy7262 493 FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERN 572 (840)
Q Consensus 493 ~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~ 572 (840)
|+..+|+++.+|++.+|++.+.+++||.|||++|+.... .+..++|+|+||||||++++..+..
T Consensus 111 ~~~~~r~~~~~~~e~~g~~~~~lv~ep~AAa~a~g~~~~-------~~~~~lVvDiG~gttdvs~v~~g~~--------- 174 (335)
T PRK13930 111 ITEVERRAVREAAEHAGAREVYLIEEPMAAAIGAGLPVT-------EPVGNMVVDIGGGTTEVAVISLGGI--------- 174 (335)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEecccHHHHHHhcCCCcC-------CCCceEEEEeCCCeEEEEEEEeCCE---------
Confidence 999999999999999999999999999999998865432 3446799999999999998864310
Q ss_pred eEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHH
Q psy7262 573 VLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 652 (840)
Q Consensus 573 ~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 652 (840)
. ......+||.++|+.|.+++
T Consensus 175 ----------------------------------------------------------~-~~~~~~lGG~~id~~l~~~l 195 (335)
T PRK13930 175 ----------------------------------------------------------V-YSESIRVAGDEMDEAIVQYV 195 (335)
T ss_pred ----------------------------------------------------------E-eecCcCchhHHHHHHHHHHH
Confidence 0 12336799999999999999
Q ss_pred HHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCe----eEEEEe--cccCCeeeEEEEehHHHHHHHHHHHHHHHH
Q psy7262 653 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ----ASIEID--SLFEGVDFYTSITRARFEELNADLFRGTME 726 (840)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----~~i~i~--~~~~~~~~~~~itr~e~e~~~~~~i~~i~~ 726 (840)
.+++. ... . ...||++|+.++.... ..+.+. ....+.+..+.|++++|++++.+.++++.+
T Consensus 196 ~~~~~----~~~--~-------~~~ae~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~ 262 (335)
T PRK13930 196 RRKYN----LLI--G-------ERTAEEIKIEIGSAYPLDEEESMEVRGRDLVTGLPKTIEISSEEVREALAEPLQQIVE 262 (335)
T ss_pred HHHhC----CCC--C-------HHHHHHHHHHhhcCcCCCCCceEEEECccCCCCCCeeEEECHHHHHHHHHHHHHHHHH
Confidence 76542 111 1 1468999999875432 223332 122344557889999999999999999999
Q ss_pred HHHHHHHHcCCC--ccCccE-EEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHH
Q psy7262 727 PVEKSLRDAKMD--KAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 727 ~i~~~l~~a~~~--~~~Id~-V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
.|.++++.+... .+.++. |+|+||+|++|.++++|++.| +.++....+|+.+||.||++++..
T Consensus 263 ~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~~l~~~~-~~~v~~~~~p~~ava~Ga~~~~~~ 328 (335)
T PRK13930 263 AVKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSEET-GLPVHIAEDPLTCVARGTGKALEN 328 (335)
T ss_pred HHHHHHHhCCHHHhhHHHhCCEEEECchhcchhHHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhC
Confidence 999999987532 233454 999999999999999999999 667778889999999999999854
No 27
>KOG0101|consensus
Probab=99.96 E-value=7.2e-29 Score=279.23 Aligned_cols=202 Identities=84% Similarity=1.240 Sum_probs=196.7
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|+++|+|||.+|++++++|+|+.|+|..+.|.+||||+..+++|..+|.|.+.||||+|+|+|+|+|+|.+|.||||.|+
T Consensus 414 ~~~~i~~~t~~P~~k~~~ftt~~dnQp~V~I~VyEger~~~kdn~~lg~feL~gippaprgvp~IevtfdiD~ngiL~Vt 493 (620)
T KOG0101|consen 414 FTVLIPRNTSIPTKKTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVT 493 (620)
T ss_pred ceeeeecccccceeeeeeeeeecCCCCceeEEEEeccccccccccccceeeecCCCccccCCcceeEEEecCCCcEEEEe
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
++++.+++...++|.+..++|+.++|++|..+++.+..+|...+.+.+++|.||+|+|.++..++++. +.++++++.+
T Consensus 494 a~d~stgK~~~i~i~n~~grls~~~Ierm~~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~~~~~~--~~i~~~~~~~ 571 (620)
T KOG0101|consen 494 AVDKSTGKENKITITNDKGRLSKEEIERMVQEAEKYKAEDEKQKDKVAAKNSLESYAFNMKATVEDEK--GKINEEDKQK 571 (620)
T ss_pred eccccCCccceEEEecccceeehhhhhhhhhhhhhccccCHHHHHHHHHHhhHHHHHHhhhhhhhhhc--cccChhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999998754 8999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQG 204 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~ 204 (840)
+..++.+...||+.+..+.+++|++|.++|+..+.||+.+++++
T Consensus 572 ~~~~~~~~i~wl~~~~~~~~~e~e~k~~el~~~~~p~~~~~~~~ 615 (620)
T KOG0101|consen 572 ILDKCNEVINWLDKNQLAEKEEFEHKQKELELVCNPIISKLYQG 615 (620)
T ss_pred HHHHHHHHHHHhhhcccccccHHHHHHHHHHhhccHHHHhhhcc
Confidence 99999999999999888889999999999999999999999986
No 28
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=99.96 E-value=9.9e-28 Score=285.07 Aligned_cols=204 Identities=72% Similarity=1.128 Sum_probs=193.8
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++++|+|+.++|+.+.|++|||++....+|..||+|.|.+++++++|.++|+|+|++|.||+|+|+
T Consensus 412 ~~~ii~~~t~iP~~~~~~f~t~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~Gil~v~ 491 (653)
T PTZ00009 412 MTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDANGILNVS 491 (653)
T ss_pred eEEEEeCCCcCCccceeEeEeecCCCceEEEEEEecccccCCCCceEEEEEEcCCCCCCCCCceEEEEEEECCCCeEEEE
Confidence 46899999999999999999999999999999999999988999999999999999999998899999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+..+++...+++.....+|+.++++++++++.++..+|+..+++.+++|+||+|||++|++|+++++.++++++++++
T Consensus 492 ~~~~~t~~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~eakN~lEs~Iy~~r~~L~~~~~~~~~t~ee~~~ 571 (653)
T PTZ00009 492 AEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTLQDEKVKGKLSDSDKAT 571 (653)
T ss_pred EecccCCceeeEEEeeccccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhccCCHHHHHH
Confidence 99999999888888766677999999999999999999999999999999999999999999998656899999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQG 204 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~ 204 (840)
+.+.++++++||+++++++.++|++|+++|+++++|+..|++..
T Consensus 572 l~~~l~~~~~wL~~~~~~~~~~~~~kl~eL~~~~~pi~~r~~~~ 615 (653)
T PTZ00009 572 IEKAIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTKMYQA 615 (653)
T ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999988888999999999999999999999998853
No 29
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=99.96 E-value=3.3e-28 Score=261.64 Aligned_cols=305 Identities=25% Similarity=0.347 Sum_probs=210.0
Q ss_pred CccccccceEEEEEEECCeEEEEEcCCCCcccceEEEeeC---CcEEEcHHHHHHHHhCcCchhhhhhHhcCCCCCChHH
Q psy7262 337 SHPVSFITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTD---TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 413 (840)
Q Consensus 337 ~~gIDGtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~---~~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~~~~~ 413 (840)
.+|||.||+++..+..+.. ++.++ ||+|+|+. +-..+|++|...+.+.|.+....
T Consensus 3 ~igIDLGT~~t~i~~~~~G--iv~~e------pSvVA~~~~~~~i~avG~~A~~m~gktp~~i~~~-------------- 60 (326)
T PF06723_consen 3 DIGIDLGTSNTRIYVKGKG--IVLNE------PSVVAYDKDTGKILAVGDEAKAMLGKTPDNIEVV-------------- 60 (326)
T ss_dssp EEEEEE-SSEEEEEETTTE--EEEEE------ES-EEEETTT--EEEESHHHHTTTTS-GTTEEEE--------------
T ss_pred ceEEecCcccEEEEECCCC--EEEec------CcEEEEECCCCeEEEEhHHHHHHhhcCCCccEEE--------------
Confidence 4699955555443433322 23333 99999994 34568999988766655543221
Q ss_pred HhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCC
Q psy7262 414 QADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYF 493 (840)
Q Consensus 414 ~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~ 493 (840)
.|.. ..-+.=.++...+|+++.+.+...... .-..++++||+.-
T Consensus 61 ------~Pl~-----------------~GvI~D~~~~~~~l~~~l~k~~~~~~~-------------~~p~vvi~vP~~~ 104 (326)
T PF06723_consen 61 ------RPLK-----------------DGVIADYEAAEEMLRYFLKKALGRRSF-------------FRPRVVICVPSGI 104 (326)
T ss_dssp -------SEE-----------------TTEESSHHHHHHHHHHHHHHHHTSS-S-------------S--EEEEEE-SS-
T ss_pred ------cccc-----------------CCcccCHHHHHHHHHHHHHHhccCCCC-------------CCCeEEEEeCCCC
Confidence 1211 011112367888888888776542111 1168999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCcee
Q psy7262 494 NDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNV 573 (840)
Q Consensus 494 ~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~ 573 (840)
++.+|+++.+|+..||.+.+.+++||.|||+..+..-. .+...|||||||||||++++.+++-
T Consensus 105 T~verrA~~~a~~~aGa~~V~li~ep~AaAiGaGl~i~-------~~~g~miVDIG~GtTdiavislggi---------- 167 (326)
T PF06723_consen 105 TEVERRALIDAARQAGARKVYLIEEPIAAAIGAGLDIF-------EPRGSMIVDIGGGTTDIAVISLGGI---------- 167 (326)
T ss_dssp -HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TT-------SSS-EEEEEE-SS-EEEEEEETTEE----------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecchHHHHhcCCCCCC-------CCCceEEEEECCCeEEEEEEECCCE----------
Confidence 99999999999999999999999999999999866543 5677899999999999999865421
Q ss_pred EEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHH
Q psy7262 574 LIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 653 (840)
Q Consensus 574 ~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 653 (840)
+ . .....+||+++|+++.+++.
T Consensus 168 ---------------------------------v------------------------~-s~si~~gG~~~DeaI~~~ir 189 (326)
T PF06723_consen 168 ---------------------------------V------------------------A-SRSIRIGGDDIDEAIIRYIR 189 (326)
T ss_dssp ---------------------------------E------------------------E-EEEES-SHHHHHHHHHHHHH
T ss_pred ---------------------------------E------------------------E-EEEEEecCcchhHHHHHHHH
Confidence 0 0 11157899999999999998
Q ss_pred HHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCC----eeEEEEe--cccCCeeeEEEEehHHHHHHHHHHHHHHHHH
Q psy7262 654 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST----QASIEID--SLFEGVDFYTSITRARFEELNADLFRGTMEP 727 (840)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----~~~i~i~--~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~ 727 (840)
+++.-.. =...||+.|+.+.... ...+.+. .+..|....+.|+.+++.+++.+.+.+|.+.
T Consensus 190 ~~y~l~I-------------g~~tAE~iK~~~g~~~~~~~~~~~~v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~I~~~ 256 (326)
T PF06723_consen 190 EKYNLLI-------------GERTAEKIKIEIGSASPPEEEESMEVRGRDLITGLPKSIEITSSEVREAIEPPVDQIVEA 256 (326)
T ss_dssp HHHSEE---------------HHHHHHHHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred HhhCccc-------------CHHHHHHHHHhcceeeccCCCceEEEECccccCCCcEEEEEcHHHHHHHHHHHHHHHHHH
Confidence 8774111 1246889999887532 2234443 4567788899999999999999999999999
Q ss_pred HHHHHHHcCCCc-cCc--cEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHH
Q psy7262 728 VEKSLRDAKMDK-AQI--HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 728 i~~~l~~a~~~~-~~I--d~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a 788 (840)
|+++|++.--.. .+| +.|+|+||+|+++.+.+.|++.+ +.++....||..+||+||....
T Consensus 257 i~~~Le~~pPel~~DI~~~GI~LtGGga~l~Gl~~~i~~~~-~~pV~va~~P~~~va~G~~~~l 319 (326)
T PF06723_consen 257 IKEVLEKTPPELAADILENGIVLTGGGALLRGLDEYISEET-GVPVRVADDPLTAVARGAGKLL 319 (326)
T ss_dssp HHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHH-SS-EEE-SSTTTHHHHHHHHTT
T ss_pred HHHHHHhCCHHHHHHHHHCCEEEEChhhhhccHHHHHHHHH-CCCEEEcCCHHHHHHHHHHHHH
Confidence 999999753111 132 56999999999999999999999 8899999999999999999655
No 30
>PRK13411 molecular chaperone DnaK; Provisional
Probab=99.95 E-value=1.7e-26 Score=274.14 Aligned_cols=203 Identities=45% Similarity=0.674 Sum_probs=189.4
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++++|+|..++|+.+.|+||||++..+.+|..||+|.|.|+|++++|.++|+|+|++|.||+|+|+
T Consensus 403 ~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~ 482 (653)
T PRK13411 403 FTKIIERNTTIPTSKSQVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLTGIPPAPRGVPQIEVSFEIDVNGILKVS 482 (653)
T ss_pred eEEEEECCCcccceeeEEEEeccCCCeEEEEEEEEecCcccccCceeeEEEEcCCCCCCCCCccEEEEEEECCCCeEEEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+..+++...+.+... ..|+++|+++++++++++..+|++++++.+++|+||+|+|.+|++|++ +...++++++++
T Consensus 483 a~d~~t~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~~--~~~~~~~~er~~ 559 (653)
T PRK13411 483 AQDQGTGREQSIRITNT-GGLSSNEIERMRQEAEKYAEEDRRRKQLIELKNQADSLLYSYESTLKE--NGELISEELKQR 559 (653)
T ss_pred EeeccCCceEeeEEecc-ccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCHHHHHH
Confidence 99999998888888654 459999999999999999999999999999999999999999999973 578999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGG 207 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~~~~ 207 (840)
+.+.++++++||+++ +++.++|++++++|++.+.++..++|++.++
T Consensus 560 i~~~l~~~~~wL~~~-~~~~~~~~~~~~el~~~~~~i~~~~y~~~~~ 605 (653)
T PRK13411 560 AEQKVEQLEAALTDP-NISLEELKQQLEEFQQALLAIGAEVYQQGGS 605 (653)
T ss_pred HHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999763 4578999999999999999999999876444
No 31
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=99.95 E-value=2.9e-26 Score=272.34 Aligned_cols=213 Identities=46% Similarity=0.738 Sum_probs=197.0
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++++|+|..|+|+.+.|++|||++..+.+|..||+|.|.|+|++++|.++|+|+|++|.||+|+|+
T Consensus 442 ~~~ii~~~t~iP~~~~~~f~~~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~Gil~v~ 521 (663)
T PTZ00400 442 FTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDVDANGIMNIS 521 (663)
T ss_pred eEEEEecCccCCccceeeeeeccCCCceEEEEEEEecCccCCcCceeEEEEEcCCCCCCCCCceEEEEEEECCCCCEEEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+..+++...+++... .+|+.+++++++++++++..+|++.+++.+++|+||+|+|.+|++|. ++...++++++++
T Consensus 522 a~~~~~~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~--e~~~~~s~~ere~ 598 (663)
T PTZ00400 522 AVDKSTGKKQEITIQSS-GGLSDEEIEKMVKEAEEYKEQDEKKKELVDAKNEAETLIYSVEKQLS--DLKDKISDADKDE 598 (663)
T ss_pred EEeccCCcEEEEEeecc-ccccHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhCCHHHHHH
Confidence 99999999888888754 45999999999999999999999999999999999999999999996 3888999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcceee
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGGAPVQPFTTTQVL 219 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~~~~~~~~~~~~~~~~ 219 (840)
+.+.++++++||+++ +.++|++++++|++++.++..++|+++.+.+.++.+++.++
T Consensus 599 i~~~l~~~~~WL~~~---d~~~i~~k~~eL~~~l~~l~~k~y~~~~~~~~~~~~~~~~~ 654 (663)
T PTZ00400 599 LKQKITKLRSTLSSE---DVDSIKDKTKQLQEASWKISQQAYKQGNSDNQQSEQSTNSE 654 (663)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCCCcc
Confidence 999999999999754 36899999999999999999999887777777777766553
No 32
>PRK13410 molecular chaperone DnaK; Provisional
Probab=99.94 E-value=2.7e-26 Score=271.80 Aligned_cols=202 Identities=35% Similarity=0.586 Sum_probs=186.0
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++.+|+|..++|+.+.|+||||++....+|..||+|.|.|+|++++|.++|+|+|++|.||+|+|+
T Consensus 403 ~~~li~rnt~iP~~~~~~f~t~~dnq~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~I~v~f~id~nGiL~V~ 482 (668)
T PRK13410 403 MKKLIPRNTTIPVRRSDVFSTSENNQSSVEIHVWQGEREMASDNKSLGRFKLSGIPPAPRGVPQVQVAFDIDANGILQVS 482 (668)
T ss_pred eEEEEeCCCcccccccccceeccCCCcEEEEEEEeeccccccCCceEEEEEEeCCCCCCCCCCeEEEEEEECCCcEEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccc--hhhhccCCHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVED--EKLKDKISDAER 158 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~--~~~~~~~~~~e~ 158 (840)
+.++.++++..++|... .+|+++|+++++++++++..+|+..+++.++||++|+|+|++|++|.+ +.+..++++++|
T Consensus 483 a~d~~tg~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~e~kn~~e~~i~~~~~~l~~~~~~~~~~~~~~~~ 561 (668)
T PRK13410 483 ATDRTTGREQSVTIQGA-STLSEQEVNRMIQEAEAKADEDRRRRERIEKRNRALTLIAQAERRLRDAALEFGPYFAERQR 561 (668)
T ss_pred EEEcCCCceeeeeeccc-ccCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHH
Confidence 99999999888888654 569999999999999999999999999999999999999999999974 368899999999
Q ss_pred HHHHHHHHHHHHHHhh-CCcccHHHHHHHHHHHHHHHHHHHHHHhc
Q psy7262 159 TQILDKCNDVIKWLDA-NQLAEKEEFEHKQKELEAICNPIITKLYQ 203 (840)
Q Consensus 159 ~~l~~~l~e~~~WLd~-~~~a~~~~~~~kl~eL~~~~~~i~~r~~~ 203 (840)
+++.+.++++++||++ +....++.|++++++|+.+..++..|..+
T Consensus 562 ~~~~~~l~~~~~wL~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 607 (668)
T PRK13410 562 RAVESAMRDVQDSLEQDDDRELDLAVADLQEALYGLNREVRAEYKE 607 (668)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999954 44566677888888888888888777666
No 33
>PLN03184 chloroplast Hsp70; Provisional
Probab=99.94 E-value=6.8e-26 Score=269.26 Aligned_cols=206 Identities=39% Similarity=0.661 Sum_probs=188.7
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++++|+|..|+|+.+.|+||||++....+|..||+|.|.+++++++|.++|+|+|++|.||+|+|+
T Consensus 440 ~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~GiL~V~ 519 (673)
T PLN03184 440 MTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVS 519 (673)
T ss_pred eEEEEeCCCccceecceEeeeecCCCcEEEEEEEeecccccccCceEEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+..++++..+++... .+|+++++++++++++++..+|++.+++.++||+||+|||.+|++|. ++.++++++++++
T Consensus 520 a~~~~t~~~~~~~i~~~-~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakN~lE~~iy~~r~~l~--e~~~~~~~eer~~ 596 (673)
T PLN03184 520 ATDKGTGKKQDITITGA-STLPKDEVERMVQEAEKFAKEDKEKRDAVDTKNQADSVVYQTEKQLK--ELGDKVPADVKEK 596 (673)
T ss_pred EEecCCCeEEEEEeccc-ccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHH--HHhhhCCHHHHHH
Confidence 99999999888888754 46999999999999999999999999999999999999999999996 4888999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGGAPVQP 212 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~~~~~~~~~ 212 (840)
+.+.++++++||+.+ +.+++++++++|.+.+.++..++|.+.++++.|+
T Consensus 597 l~~~l~~~e~wL~~~---d~~~ik~~~~~l~~~l~~l~~~~~~~~~~~~~~~ 645 (673)
T PLN03184 597 VEAKLKELKDAIASG---STQKMKDAMAALNQEVMQIGQSLYNQPGAGGAGP 645 (673)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999754 3578899999999999999988887655444443
No 34
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=99.94 E-value=5.6e-25 Score=226.91 Aligned_cols=311 Identities=23% Similarity=0.337 Sum_probs=230.3
Q ss_pred CCcccc-ccceEEEEEEECCeEEEEEcCCCCcccceEEEeeC--C---cEEEcHHHHHHHHhCcCchhhhhhHhcCCCCC
Q psy7262 336 PSHPVS-FITSALQGVFQHGKVEIIANDQGNRTTPSYVAFTD--T---ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFE 409 (840)
Q Consensus 336 ~~~gID-GtT~s~va~~~~g~~~ii~~~~g~~~iPS~V~f~~--~---~~~~G~~A~~~~~~~p~~~i~~~K~llg~~~~ 409 (840)
..+||| ||.|+-|.+-..| ++.++ ||+|+++. + ...+|.+|+.++.+.|++...- ++..
T Consensus 7 ~diGIDLGTanTlV~~k~kg---IVl~e------PSVVAi~~~~~~~~v~aVG~eAK~MlGrTP~ni~ai------RPmk 71 (342)
T COG1077 7 NDIGIDLGTANTLVYVKGKG---IVLNE------PSVVAIESEGKTKVVLAVGEEAKQMLGRTPGNIVAI------RPMK 71 (342)
T ss_pred ccceeeecccceEEEEcCce---EEecC------ceEEEEeecCCCceEEEehHHHHHHhccCCCCceEE------eecC
Confidence 478999 6666655443233 55666 99999985 3 3568999999987777765432 1111
Q ss_pred ChHHHhhcccCCeeEeecCCcceEEEEEcCcceeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEee
Q psy7262 410 DATVQADMKHWPFEVVSDGGKPKIKVEYKGEAKTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITV 489 (840)
Q Consensus 410 ~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitV 489 (840)
| ..+--.++...+|+|+.+......+. . ....++++|
T Consensus 72 d-------------------------------GVIAd~~~te~ml~~fik~~~~~~~~-~-----------~~prI~i~v 108 (342)
T COG1077 72 D-------------------------------GVIADFEVTELMLKYFIKKVHKNGSS-F-----------PKPRIVICV 108 (342)
T ss_pred C-------------------------------cEeecHHHHHHHHHHHHHHhccCCCC-C-----------CCCcEEEEe
Confidence 1 11112278888888888776432211 0 115799999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCC
Q psy7262 490 PAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSG 569 (840)
Q Consensus 490 Pa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g 569 (840)
|..-++-.|+++++|++.||.+.+.++.||.|||+...+.-. .+..-+||||||||||++++.+++-+
T Consensus 109 P~g~T~VErrAi~ea~~~aGa~~V~lieEp~aAAIGaglpi~-------ep~G~mvvDIGgGTTevaVISlggiv----- 176 (342)
T COG1077 109 PSGITDVERRAIKEAAESAGAREVYLIEEPMAAAIGAGLPIM-------EPTGSMVVDIGGGTTEVAVISLGGIV----- 176 (342)
T ss_pred cCCccHHHHHHHHHHHHhccCceEEEeccHHHHHhcCCCccc-------CCCCCEEEEeCCCceeEEEEEecCEE-----
Confidence 999999999999999999999999999999999998855433 44456999999999999998775410
Q ss_pred CceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHH
Q psy7262 570 ERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 649 (840)
Q Consensus 570 ~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~ 649 (840)
......+||+.+|+.+.
T Consensus 177 ---------------------------------------------------------------~~~Sirv~GD~~De~Ii 193 (342)
T COG1077 177 ---------------------------------------------------------------SSSSVRVGGDKMDEAII 193 (342)
T ss_pred ---------------------------------------------------------------EEeeEEEecchhhHHHH
Confidence 11124679999999999
Q ss_pred HHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCC--------CeeEEEEecccCCeeeEEEEehHHHHHHHHHHH
Q psy7262 650 NHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS--------TQASIEIDSLFEGVDFYTSITRARFEELNADLF 721 (840)
Q Consensus 650 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~--------~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i 721 (840)
.++.+.++--.+. ..+|+.|+..... .+..+.-..+..+..-.+.++.+++.+++++.+
T Consensus 194 ~yvr~~~nl~IGe-------------~taE~iK~eiG~a~~~~~~~~~~~eV~Grdl~~GlPk~i~i~s~ev~eal~~~v 260 (342)
T COG1077 194 VYVRKKYNLLIGE-------------RTAEKIKIEIGSAYPEEEDEELEMEVRGRDLVTGLPKTITINSEEIAEALEEPL 260 (342)
T ss_pred HHHHHHhCeeecH-------------HHHHHHHHHhcccccccCCccceeeEEeeecccCCCeeEEEcHHHHHHHHHHHH
Confidence 9998877532222 1366777665322 123344444556777889999999999999999
Q ss_pred HHHHHHHHHHHHHcC--CCccCccE-EEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 722 RGTMEPVEKSLRDAK--MDKAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 722 ~~i~~~i~~~l~~a~--~~~~~Id~-V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
+.|.+.++..|++.. +.++-++. ++|+||+|.+..+.+.|++.. +.++....+|..+||.|+......+..
T Consensus 261 ~~Iveair~~Le~tpPeL~~DI~ergivltGGGalLrglD~~i~~et-~~pv~ia~~pL~~Va~G~G~~le~~~~ 334 (342)
T COG1077 261 NGIVEAIRLVLEKTPPELAADIVERGIVLTGGGALLRGLDRLLSEET-GVPVIIADDPLTCVAKGTGKALEALDL 334 (342)
T ss_pred HHHHHHHHHHHhhCCchhcccHhhCceEEecchHHhcCchHhHHhcc-CCeEEECCChHHHHHhccchhhhhhHh
Confidence 999999999999853 33344555 999999999999999999988 778888899999999999988876653
No 35
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=99.93 E-value=3.7e-25 Score=260.92 Aligned_cols=208 Identities=40% Similarity=0.604 Sum_probs=191.2
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++..|+|..|+|+.+.|+|||||+..+.+|..||+|.|.|+||.++|.++|+|+|++|.||+|+|+
T Consensus 428 ~~~iI~rnt~iP~~~~~~f~t~~dnQ~~v~i~i~qGe~~~~~~n~~lg~~~l~~ip~~~~G~~~I~Vtf~iD~nGiL~V~ 507 (657)
T PTZ00186 428 FTRMIPKNTTIPTKKSQTFSTAADNQTQVGIKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQIEVTFDIDANGICHVT 507 (657)
T ss_pred EEEEEeCCCEeeEEEeeccccccCCCceEEEEEEEecccccccccccceEEEcCCCCCCCCCCcEEEEEEEcCCCEEEEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.++.+|+...++|.... .|+++|+++++++++++..+|+..+++.+++|++|.+++.++..+++ . ..++++++++
T Consensus 508 a~d~~tg~~~~~~i~~~~-~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ 583 (657)
T PTZ00186 508 AKDKATGKTQNITITANG-GLSKEQIEQMIRDSEQHAEADRVKRELVEVRNNAETQLTTAERQLGE--W-KYVSDAEKEN 583 (657)
T ss_pred EEEccCCcEEEEEeccCc-cCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhh--h-ccCCHHHHHH
Confidence 999999999999997654 59999999999999999999999999999999999999999999964 1 4689999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGGAPVQPF 213 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~~~~~~~~~~ 213 (840)
+.+.++++++||+.+ +.+.+.+++++++|++.+.++..+++.+.+++++++.
T Consensus 584 ~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 635 (657)
T PTZ00186 584 VKTLVAELRKAMENP-NVAKDDLAAATDKLQKAVMECGRTEYQQAAAANSGSS 635 (657)
T ss_pred HHHHHHHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Confidence 999999999999743 3467899999999999999999988876666665543
No 36
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=99.93 E-value=5e-25 Score=261.89 Aligned_cols=198 Identities=49% Similarity=0.752 Sum_probs=186.3
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++++|+|..++|+.+.|++|||++....+|..||+|.|.++|++++|.++|+|+|++|.||+|+|+
T Consensus 401 ~~~ii~~~t~~P~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~gil~v~ 480 (627)
T PRK00290 401 MTKLIERNTTIPTKKSQVFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIEVTFDIDANGIVHVS 480 (627)
T ss_pred EEEEecCCCcCCccceEEEEecCCCcceEEEEEEEecccccCcCceEEEEEECCCCCCCCCCceEEEEEEECCCceEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+..+++...+++... .+|+.++++++++++.++..+|++.+++.+++|+||+|+|.+|++|+ ++...++++++++
T Consensus 481 a~~~~~~~~~~~~i~~~-~~ls~e~i~~~~~~~~~~~~~d~~~~~~~eakN~le~~i~~~~~~l~--~~~~~~~~~e~~~ 557 (627)
T PRK00290 481 AKDKGTGKEQSITITAS-SGLSDEEIERMVKDAEANAEEDKKRKELVEARNQADSLIYQTEKTLK--ELGDKVPADEKEK 557 (627)
T ss_pred EEEccCCceeEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHH--HHhccCCHHHHHH
Confidence 99999999888888654 45999999999999999999999999999999999999999999996 4778999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQG 204 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~ 204 (840)
+.+.++++++||+++ +.++|++++++|+++++++..|++++
T Consensus 558 i~~~l~~~~~wL~~~---~~~~i~~k~~~L~~~~~~~~~~~~~~ 598 (627)
T PRK00290 558 IEAAIKELKEALKGE---DKEAIKAKTEELTQASQKLGEAMYQQ 598 (627)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999755 57899999999999999999998864
No 37
>CHL00094 dnaK heat shock protein 70
Probab=99.93 E-value=5.5e-25 Score=260.74 Aligned_cols=198 Identities=47% Similarity=0.719 Sum_probs=185.1
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++++|+|..++|+.+.++||||++..+.+|..||+|.|.++|++++|.++|+|+|++|.||+|+|+
T Consensus 403 ~~~ii~~~t~iP~~~~~~~~~~~~~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~~~~~~~g~~~i~v~f~id~~Gil~v~ 482 (621)
T CHL00094 403 MTKIIPRNTTIPTKKSEVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILSVT 482 (621)
T ss_pred EEEEEeCCCccceeeeEEEEeccCCCcEEEEEEEeeccccCCCCCEEEEEEEeCCCCCCCCCCcEEEEEEECCCCeEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+..+++...+.+... .+|++++++++++++.++..+|++.+++.++||+||+|+|.+|++++ .+...+++++|++
T Consensus 483 ~~~~~t~~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~le~~i~~~~~~l~--~~~~~~~~~~~~~ 559 (621)
T CHL00094 483 AKDKGTGKEQSITIQGA-STLPKDEVERMVKEAEKNAAEDKEKREKIDLKNQAESLCYQAEKQLK--ELKDKISEEKKEK 559 (621)
T ss_pred EeeccCCceeeeeeccc-hhccHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhHHHHHHHHHHHH--HHhccCCHHHHHH
Confidence 99999998888888643 46999999999999999999999999999999999999999999997 3888999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQG 204 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~ 204 (840)
+.+.++++++||+++ ..+++++++++|++.++++..+++..
T Consensus 560 ~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~kl~~~ 600 (621)
T CHL00094 560 IENLIKKLRQALQND---NYESIKSLLEELQKALMEIGKEVYSS 600 (621)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999654 34799999999999999999988773
No 38
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein.
Probab=99.93 E-value=4.7e-25 Score=230.28 Aligned_cols=200 Identities=22% Similarity=0.335 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHh
Q psy7262 447 EEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAY 526 (840)
Q Consensus 447 ~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y 526 (840)
.+..+++|+++++.++..++... .++|+|||++|++.||+++.+|++.||++.+.++.||.|||+.|
T Consensus 39 ~~~~~~~l~~l~~~a~~~~g~~~-------------~~vvisVP~~~~~~~r~a~~~a~~~aGl~~~~li~ep~Aaa~~~ 105 (239)
T TIGR02529 39 FLGAVEIVRRLKDTLEQKLGIEL-------------THAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAAAAVL 105 (239)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCc-------------CcEEEEECCCCCcccHHHHHHHHHHcCCceEEEeehHHHHHHHh
Confidence 38999999999999988877655 79999999999999999999999999999999999999999988
Q ss_pred hcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceE
Q psy7262 527 GLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNV 606 (840)
Q Consensus 527 ~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v 606 (840)
... ..+|+||||||||+++++.+.
T Consensus 106 ~~~------------~~~vvDiGggtt~i~i~~~G~-------------------------------------------- 129 (239)
T TIGR02529 106 QIK------------NGAVVDVGGGTTGISILKKGK-------------------------------------------- 129 (239)
T ss_pred cCC------------CcEEEEeCCCcEEEEEEECCe--------------------------------------------
Confidence 421 259999999999999975321
Q ss_pred EEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcC
Q psy7262 607 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLS 686 (840)
Q Consensus 607 ~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls 686 (840)
++ . ..+..+||++||+.|++.+. . -...||++|+.+.
T Consensus 130 i~-----------------------~-~~~~~~GG~~it~~Ia~~~~--------i-----------~~~~AE~~K~~~~ 166 (239)
T TIGR02529 130 VI-----------------------Y-SADEPTGGTHMSLVLAGAYG--------I-----------SFEEAEEYKRGHK 166 (239)
T ss_pred EE-----------------------E-EEeeecchHHHHHHHHHHhC--------C-----------CHHHHHHHHHhcC
Confidence 00 0 12357899999998876552 1 1257888988754
Q ss_pred CCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcC
Q psy7262 687 SSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 766 (840)
Q Consensus 687 ~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~ 766 (840)
. .+++.+++.+.++++.+.+++.|++. .++.|+|+||+|++|.+++.+++.|
T Consensus 167 ~----------------------~~~~~~~i~~~~~~i~~~i~~~l~~~-----~~~~v~LtGG~a~ipgl~e~l~~~l- 218 (239)
T TIGR02529 167 D----------------------EEEIFPVVKPVYQKMASIVKRHIEGQ-----GVKDLYLVGGACSFSGFADVFEKQL- 218 (239)
T ss_pred C----------------------HHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEECchhcchhHHHHHHHHh-
Confidence 1 45677899999999999999999864 3578999999999999999999999
Q ss_pred CCcccCCCChhhHHHHHHHH
Q psy7262 767 GKELNKSINPDEAVAYGAAV 786 (840)
Q Consensus 767 ~~~v~~~~~p~~aVA~GAal 786 (840)
+.++..+.||+++||.|||+
T Consensus 219 g~~v~~~~~P~~~va~Gaa~ 238 (239)
T TIGR02529 219 GLNVIKPQHPLYVTPLGIAM 238 (239)
T ss_pred CCCcccCCCCCeehhheeec
Confidence 77888899999999999985
No 39
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=99.93 E-value=1.6e-24 Score=256.82 Aligned_cols=196 Identities=50% Similarity=0.757 Sum_probs=183.3
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++++|+|..|+|+.+.+++|||++..+.+|..||+|.|.+++++++|.++|+|+|++|.||+|+|+
T Consensus 399 ~~~ii~~~~~iP~~~~~~~~~~~d~q~~v~i~i~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~G~l~v~ 478 (595)
T TIGR02350 399 MTKLIERNTTIPTKKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTFDIDANGILHVS 478 (595)
T ss_pred eEEEEeCCCcCCccceEeeeccCCCCcEEEEEEEeecccccccCcEeEEEEECCCCCCCCCCceEEEEEEEcCCCeEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+..+++...+++... .+|+.++++++++++.++..+|+..+++.+++|+||+|||.+|++|++ +...++++++++
T Consensus 479 ~~~~~~~~~~~~~i~~~-~~ls~~~~~~~~~~~~~~~~~D~~~~~~~e~kn~lEs~iy~~r~~l~~--~~~~~~~~e~~~ 555 (595)
T TIGR02350 479 AKDKGTGKEQSITITAS-SGLSEEEIERMVKEAEANAEEDKKRKEEIEARNNADSLAYQAEKTLKE--AGDKLPAEEKEK 555 (595)
T ss_pred EEEccCCceEEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCHHHHHH
Confidence 99999999888888765 459999999999999999999999999999999999999999999963 578999999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHh
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLY 202 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~ 202 (840)
+.+.++++++||+++ +..+|++++++|++++.++..++|
T Consensus 556 l~~~l~~~~~wL~~~---d~~~i~~~~~~l~~~~~~~~~~~~ 594 (595)
T TIGR02350 556 IEKAVAELKEALKGE---DVEEIKAKTEELQQALQKLAEAMY 594 (595)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999765 357899999999999999987765
No 40
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=99.92 E-value=8.9e-24 Score=249.42 Aligned_cols=197 Identities=32% Similarity=0.497 Sum_probs=183.2
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||+++++.|+|..++|+.+.++|||||+..+.+|..||+|.|.|+|+.++|.++|+|+|++|.||+|+|+
T Consensus 405 ~~~ii~r~t~iP~~~~~~~~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~~d~~Gil~V~ 484 (616)
T PRK05183 405 VEKIIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLARFELRGIPPMAAGAARIRVTFQVDADGLLSVT 484 (616)
T ss_pred EEEEEeCCCcccccccEEEEeccCCCeEEEEEEecccccccccccEEEEEEeCCCCCCCCCCccEEEEEEECCCCeEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.++.++++..+.+.... .|++++++++++++.+++.+|+..+++.+++|++|.|+|.+++.+.+ ....++++++++
T Consensus 485 a~~~~~~~~~~~~i~~~~-~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~ 561 (616)
T PRK05183 485 AMEKSTGVEASIQVKPSY-GLTDDEIARMLKDSMSHAEEDMQARALAEQKVEAERVLEALQAALAA--DGDLLSAAERAA 561 (616)
T ss_pred EEEcCCCcEEEecccccc-cCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCHHHHHH
Confidence 999999999888886554 49999999999999999999999999999999999999999999963 346789999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhc
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQ 203 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~ 203 (840)
+.+.++++++||+.+ +.++|++++++|++.+.++..+.++
T Consensus 562 ~~~~l~~~~~~l~~~---d~~~~~~~~~~l~~~~~~~~~~~~~ 601 (616)
T PRK05183 562 IDAAMAALREVAQGD---DADAIEAAIKALDKATQEFAARRMD 601 (616)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999754 4689999999999999999986665
No 41
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=99.92 E-value=1.4e-23 Score=247.20 Aligned_cols=197 Identities=34% Similarity=0.506 Sum_probs=182.1
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||++++..|+|..|+|+.+.|+|||||+..+.+|..||+|.|.|+|+.++|.++|+|+|++|.||+|+|+
T Consensus 389 ~~~ii~rnt~iP~~~~~~~~t~~d~q~~v~i~i~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~V~ 468 (599)
T TIGR01991 389 VEKIIPRNTPIPVARAQEFTTYKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLTVS 468 (599)
T ss_pred EEEEEeCCCcCCccceEEEEEccCCCeEEEEEEEeecccccccCceEEEEEEcCCCCCCCCCCcEEEEEEECCCCeEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.++.++++..+.+.... .|++++++++++++.++..+|+..++..+++|++|+|+|.++..+.+ +...++++++++
T Consensus 469 a~~~~t~~~~~~~i~~~~-~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 545 (599)
T TIGR01991 469 AQEQSTGVEQSIQVKPSY-GLSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERILEALQAALAA--DGDLLSEDERAA 545 (599)
T ss_pred EEECCCCcEEEEeccccc-CCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCHHHHHH
Confidence 999999998888887554 49999999999999999999999999999999999999999998863 456889999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhc
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQ 203 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~ 203 (840)
+.+.++++++||+++ +.++++++.++|++++.++..+.++
T Consensus 546 ~~~~l~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (599)
T TIGR01991 546 IDAAMEALQKALQGD---DADAIKAAIEALEEATDNFAARRMD 585 (599)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999754 3578999999999999999876654
No 42
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=99.91 E-value=2.4e-23 Score=243.64 Aligned_cols=190 Identities=31% Similarity=0.478 Sum_probs=171.7
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.+|||||++||+++++.|+|..++|+.+.|+|||||+..+.+|..||+|.|.|+|+.++|.++|+|+|++|.||+|+|+
T Consensus 383 ~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~vtf~id~~Gil~V~ 462 (595)
T PRK01433 383 VEKIIMRNTPIPISVVKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTFAIDADGILSVS 462 (595)
T ss_pred EEEEEECCCcccceeeEEeEeecCCCeEEEEEEEeccccccCCCcEEEEEEEcCCCCCCCCCccEEEEEEECCCCcEEEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.++.+|++..+.|.... .|+++|+++++++++++..+|+..++..+++|++|+++|.+++.+++ +...++++++++
T Consensus 463 a~~~~t~~~~~~~i~~~~-~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~ 539 (595)
T PRK01433 463 AYEKISNTSHAIEVKPNH-GIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALIFNIERAIAE--LTTLLSESEISI 539 (595)
T ss_pred EEEcCCCcEEEEEecCCC-CCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCHHHHHH
Confidence 999999999999887654 49999999999999999999999999999999999999999999963 566789999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHH
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNP 196 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~ 196 (840)
+.+.++++++||+.++ ...+++++++|+....+
T Consensus 540 i~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~ 572 (595)
T PRK01433 540 INSLLDNIKEAVHARD---IILINNSIKEFKSKIKK 572 (595)
T ss_pred HHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHH
Confidence 9999999999997543 44555555555555555
No 43
>KOG0102|consensus
Probab=99.90 E-value=2.8e-23 Score=224.65 Aligned_cols=202 Identities=42% Similarity=0.671 Sum_probs=188.0
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|+.||||||.||++++..|.|.-|+|+.|.|+++|||+....+|..||+|.+.|+||+|+|.|+|+|+|.+|.|||++|+
T Consensus 428 ft~Li~rnttIptkksqvfstaadgqt~V~ikv~qgere~~~dnk~lG~f~l~gipp~pRgvpqieVtfDIdanGI~~vs 507 (640)
T KOG0102|consen 428 FTKLIPRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIEVTFDIDANGIGTVS 507 (640)
T ss_pred heecccCCcccCchhhhheeecccCCceEEEEeeechhhhhccCcccceeeecccCCCCCCCCceeEEEeecCCceeeee
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
|.++.+++..++++....+ |+++|++.|+.+++++...|+.++++.+.+|..++++|.....+. ++.+.++.++..+
T Consensus 508 A~dk~t~K~qsi~i~~sgg-Ls~~ei~~mV~eaer~~~~d~~~~~~ie~~nka~s~~~~te~~~~--~~~~~~~~~~~~~ 584 (640)
T KOG0102|consen 508 AKDKGTGKSQSITIASSGG-LSKDEIELMVGEAERLASTDKEKREAIETKNKADSIIYDTEKSLK--EFEEKIPAEECEK 584 (640)
T ss_pred hhhcccCCccceEEeecCC-CCHHHHHHHHHHHHHHHhhhHHHHHHhhhhcchhheecCchhhhh--hhhhhCcHHHHHH
Confidence 9999999999999988766 999999999999999999999999999999999999999988886 5778888889999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGS 205 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~~ 205 (840)
+...+.++.+.+..-+..+..++..+...|++...++..-++...
T Consensus 585 i~~~i~~l~~~~~~~~~~~~~~~k~~~~~l~q~~lkl~es~~k~~ 629 (640)
T KOG0102|consen 585 LEEKISDLRELVANKDSGDMEEIKKAMSALQQASLKLFESAYKNM 629 (640)
T ss_pred HHHHHHHHHHHHhhhccCChhhHHHHHHHHHHhhhHHHHHHHhhh
Confidence 999999999988432333458899999999999999999888653
No 44
>PRK15080 ethanolamine utilization protein EutJ; Provisional
Probab=99.89 E-value=7.2e-22 Score=209.98 Aligned_cols=201 Identities=24% Similarity=0.367 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhh
Q psy7262 448 EVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYG 527 (840)
Q Consensus 448 ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~ 527 (840)
+.....|+++++.++..++... ..++++||++|+..+++++.+|++.||++...++.||.|++..|.
T Consensus 67 ~~a~~~i~~~~~~ae~~~g~~i-------------~~v~~~vp~~~~~~~~~~~~~~~~~aGl~~~~ii~e~~A~a~~~~ 133 (267)
T PRK15080 67 IGAVTIVRRLKATLEEKLGREL-------------THAATAIPPGTSEGDPRAIINVVESAGLEVTHVLDEPTAAAAVLG 133 (267)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc-------------CeEEEEeCCCCCchhHHHHHHHHHHcCCceEEEechHHHHHHHhC
Confidence 7788899999999988877655 788999999999999999999999999999999999999998773
Q ss_pred cccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEE
Q psy7262 528 LDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVL 607 (840)
Q Consensus 528 ~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~ 607 (840)
.. .++|+||||||||+++++-+. +
T Consensus 134 ~~------------~~~vvDIGggtt~i~v~~~g~--------------------------------------------~ 157 (267)
T PRK15080 134 ID------------NGAVVDIGGGTTGISILKDGK--------------------------------------------V 157 (267)
T ss_pred CC------------CcEEEEeCCCcEEEEEEECCe--------------------------------------------E
Confidence 21 258999999999999875321 0
Q ss_pred EEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCC
Q psy7262 608 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSS 687 (840)
Q Consensus 608 v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~ 687 (840)
.. ..+..+||.+||+.+++++. . -+..||++|+.++
T Consensus 158 -----------------------~~-~~~~~~GG~~it~~Ia~~l~--------i-----------~~~eAE~lK~~~~- 193 (267)
T PRK15080 158 -----------------------VY-SADEPTGGTHMSLVLAGAYG--------I-----------SFEEAEQYKRDPK- 193 (267)
T ss_pred -----------------------EE-EecccCchHHHHHHHHHHhC--------C-----------CHHHHHHHHhccC-
Confidence 01 12468999999999987762 1 1246888887653
Q ss_pred CCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCC
Q psy7262 688 STQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 767 (840)
Q Consensus 688 ~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~ 767 (840)
+++++.+++++.++++.+.+++.++.. .++.|+|+||+|++|.+++.+++.| +
T Consensus 194 ---------------------~~~~~~~ii~~~~~~i~~~i~~~l~~~-----~~~~IvLtGG~s~lpgl~e~l~~~l-g 246 (267)
T PRK15080 194 ---------------------HHKEIFPVVKPVVEKMASIVARHIEGQ-----DVEDIYLVGGTCCLPGFEEVFEKQT-G 246 (267)
T ss_pred ---------------------CHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCcccchhHHHHHHHHh-C
Confidence 257788999999999999999998863 5789999999999999999999999 7
Q ss_pred CcccCCCChhhHHHHHHHHHH
Q psy7262 768 KELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 768 ~~v~~~~~p~~aVA~GAal~a 788 (840)
.++..+.+|+.++|.|||+++
T Consensus 247 ~~v~~~~~P~~~~a~Gaa~~~ 267 (267)
T PRK15080 247 LPVHKPQHPLFVTPLGIALSC 267 (267)
T ss_pred CCcccCCCchHHHHHHHHhhC
Confidence 788889999999999999874
No 45
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=99.85 E-value=5.9e-20 Score=219.44 Aligned_cols=197 Identities=40% Similarity=0.728 Sum_probs=180.7
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.++||+|+++|++++..|+|..++|..+.+.+|+|+.....+|..||+|.|.++++.++|.++|+|+|++|.||+|+|+
T Consensus 405 ~~~ii~~~t~iP~~~~~~~~t~~~~~~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~f~ld~~Gil~V~ 484 (602)
T PF00012_consen 405 FSKIIPKNTPIPSKKSKSFKTVTDNQTSISIDIYEGESSSFEDNKKIGSYTISGIPPAPKGKPKIKVTFELDENGILSVE 484 (602)
T ss_dssp EEEEESTTEBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEES-SSSSTTSSEEEEEEEEETTSEEEEE
T ss_pred cccccccccccccccccccchhccccccccceeeeccccccccccccccccccccccccccccceeeEEeeeeeeehhhh
Confidence 46799999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.+...+....+.+..... +++++++++.++++++..+|+..++..+++|+||+++|++|+.+++. .+.++++++
T Consensus 485 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~e~kn~lE~~i~~~r~~l~~~--~~~~~~~~~-- 559 (602)
T PF00012_consen 485 AAEVETGKEEEVTVKKKET-LSKEEIEELKKKLEEMDEEDEERRERAEAKNELESYIYELRDKLEED--KDFVSEEEK-- 559 (602)
T ss_dssp EEETTTTEEEEEEEESSSS-SCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--GGGSTHHHH--
T ss_pred hcccccccccccccccccc-cccccccccccccchhhhhhhhhhhccccHHHHHHHHHHHHHHHHhh--hccCCHHHH--
Confidence 9999888888888877655 99999999999999999999999999999999999999999999864 677787777
Q ss_pred HHHHHHHHHHHHh-hCCcccHHHHHHHHHHHHHHHHHHHHHHhc
Q psy7262 161 ILDKCNDVIKWLD-ANQLAEKEEFEHKQKELEAICNPIITKLYQ 203 (840)
Q Consensus 161 l~~~l~e~~~WLd-~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~ 203 (840)
.+.+++..+||+ ..+.++.++|++|+++|++..+||..|+++
T Consensus 560 -~~~l~~~~~wl~~~~~~~~~~e~~~kl~~L~~~~~~i~~r~~~ 602 (602)
T PF00012_consen 560 -KKKLKETSDWLEDNGEDADKEEYKEKLEELKKVIEPIKKRYMQ 602 (602)
T ss_dssp -HHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 788999999994 456778999999999999999999999874
No 46
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=1.2e-18 Score=202.94 Aligned_cols=195 Identities=49% Similarity=0.753 Sum_probs=184.1
Q ss_pred CcEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecCCccEEEE
Q psy7262 1 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 1 ~~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~nGil~V~ 80 (840)
|.++|++|+.+|+++...|+|..|+|..+.++++|||+....+|..+|.|.+.++||.++|.++|+|+|.+|.||+++|+
T Consensus 384 ~~~ii~rn~~iP~~~~~~f~t~~d~q~~~~i~v~qge~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD~~gi~~v~ 463 (579)
T COG0443 384 RTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGEREMAADNKSLGRFELDGIPPAPRGVPQIEVTFDIDANGILNVT 463 (579)
T ss_pred hhhHHhcCCCCCcccceEEEeecCCCceeEEEEEecchhhcccCceeEEEECCCCCCCCCCCCceEEEeccCCCcceEee
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceeEeccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHH
Q psy7262 81 AIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQ 160 (840)
Q Consensus 81 a~~~~~~~~~~l~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~ 160 (840)
+.++.+++...++|....+ |++++++.|.+.++.+...|+..++..+.+|.++.+++.++..|.+.. .+++++++.
T Consensus 464 a~~~~~~k~~~i~i~~~~~-ls~~~i~~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~ 539 (579)
T COG0443 464 AKDLGTGKEQSITIKASSG-LSDEEIERMVEDAEANAALDKKFRELVEARNEAESLIYSLEKALKEIV---KVSEEEKEK 539 (579)
T ss_pred eecccCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHhhhc---cCCHHHHHH
Confidence 9999999999999999888 999999999999999999999999999999999999999999997532 899999999
Q ss_pred HHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHHHHHHhc
Q psy7262 161 ILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQ 203 (840)
Q Consensus 161 l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~ 203 (840)
+.+.+.++++||++ + .++++.+.++|+....++..+.++
T Consensus 540 ~~~~~~~~~~~l~~-~---~~~~~~~~~~l~~~~~~~~~~~~~ 578 (579)
T COG0443 540 IEEAITDLEEALEG-E---KEEIKAKIEELQEVTQKLAEKKYQ 578 (579)
T ss_pred HHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999976 2 889999999999999999887664
No 47
>TIGR01174 ftsA cell division protein FtsA. This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.
Probab=99.80 E-value=4.8e-18 Score=190.30 Aligned_cols=195 Identities=23% Similarity=0.318 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEE
Q psy7262 496 SQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLI 575 (840)
Q Consensus 496 ~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~ 575 (840)
...+.+.+|++.||++...++.||.|+|+.|.... ..+..++|+|+||||||+++++.+.
T Consensus 158 ~~v~~~~~~~~~aGl~~~~i~~~~~A~a~a~~~~~-------~~~~~~~vvDiG~gtt~i~i~~~g~------------- 217 (371)
T TIGR01174 158 TILRNLVKCVERCGLEVDNIVLSGLASAIAVLTED-------EKELGVCLIDIGGGTTDIAVYTGGS------------- 217 (371)
T ss_pred HHHHHHHHHHHHcCCCeeeEEEhhhhhhhhhcCcc-------hhcCCEEEEEeCCCcEEEEEEECCE-------------
Confidence 56677889999999999999999999999884322 2456799999999999999985321
Q ss_pred EecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHHH
Q psy7262 576 FDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 655 (840)
Q Consensus 576 ~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~ 655 (840)
+++ .....+||+++++.+.+.+.
T Consensus 218 -------------------------------~~~------------------------~~~i~~GG~~it~~i~~~l~-- 240 (371)
T TIGR01174 218 -------------------------------IRY------------------------TKVIPIGGNHITKDIAKALR-- 240 (371)
T ss_pred -------------------------------EEE------------------------EeeecchHHHHHHHHHHHhC--
Confidence 000 11246899999998876542
Q ss_pred HHHhccCCccccHHHHHHHHHHHHHHHHHcCCC------CeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHH
Q psy7262 656 FKRKYKKDLTTNKRALRRLRTACERAKRTLSSS------TQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVE 729 (840)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~ 729 (840)
.....||++|+.++.. ....+.+.... .+....|++++|++++++.++++.+.+.
T Consensus 241 -----------------~~~~~AE~lK~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~is~~~l~~ii~~~~~ei~~~i~ 301 (371)
T TIGR01174 241 -----------------TPLEEAERIKIKYGCASIPLEGPDENIEIPSVG--ERPPRSLSRKELAEIIEARAEEILEIVK 301 (371)
T ss_pred -----------------CCHHHHHHHHHHeeEecccCCCCCCEEEeccCC--CCCCeEEcHHHHHHHHHHHHHHHHHHHH
Confidence 2245789999998763 23455555443 3556899999999999999999999997
Q ss_pred -HHHHHcCCCccCccE-EEEEcCCCCcHHHHHHHHhHcCCC-cccC----------CCChhhHHHHHHHHH
Q psy7262 730 -KSLRDAKMDKAQIHD-IVLVGGSTRIPKVQKLLQDFFNGK-ELNK----------SINPDEAVAYGAAVQ 787 (840)
Q Consensus 730 -~~l~~a~~~~~~Id~-V~LvGG~s~~p~v~~~l~~~f~~~-~v~~----------~~~p~~aVA~GAal~ 787 (840)
+.|++++.. .+++. |+|+||+|++|.+++.+++.|+.. ++.. ..+|..++|.|+++|
T Consensus 302 ~~~L~~~~~~-~~i~~gIvLtGG~S~ipgi~~~l~~~~~~~vr~~~P~~~~~~~~~~~~p~~~~a~Gl~~~ 371 (371)
T TIGR01174 302 QKELRKSGFK-EELNGGIVLTGGGAQLEGIVELAEKVFDNPVRIGLPQNIGGLTEDVNDPEYSTAVGLLLY 371 (371)
T ss_pred HHHHHhcCCc-ccCCCEEEEeChHHcccCHHHHHHHHhCCCeEEECCCccCCchhhcCCcHHHHHHHHHhC
Confidence 999998876 56777 999999999999999999999432 1111 237899999999864
No 48
>PRK09472 ftsA cell division protein FtsA; Reviewed
Probab=99.79 E-value=2.7e-17 Score=186.43 Aligned_cols=197 Identities=20% Similarity=0.234 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEE
Q psy7262 497 QRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIF 576 (840)
Q Consensus 497 ~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~ 576 (840)
..+.+.+|++.||++...++.||.|+|..+.... .++..++|+||||||||++++.-+.
T Consensus 167 ~~~~~~~a~~~aGl~v~~iv~ep~Aaa~a~l~~~-------e~~~gv~vvDiGggtTdisv~~~G~-------------- 225 (420)
T PRK09472 167 MAKNIVKAVERCGLKVDQLIFAGLASSYAVLTED-------ERELGVCVVDIGGGTMDIAVYTGGA-------------- 225 (420)
T ss_pred HHHHHHHHHHHcCCeEeeEEehhhHHHHHhcChh-------hhhcCeEEEEeCCCceEEEEEECCE--------------
Confidence 3445567999999999999999999999885432 2567899999999999999996321
Q ss_pred ecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHHHH
Q psy7262 577 DLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 656 (840)
Q Consensus 577 d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~ 656 (840)
++ ......+||+++++.|++.+.-
T Consensus 226 ------------------------------l~------------------------~~~~i~~GG~~it~dIa~~l~i-- 249 (420)
T PRK09472 226 ------------------------------LR------------------------HTKVIPYAGNVVTSDIAYAFGT-- 249 (420)
T ss_pred ------------------------------EE------------------------EEeeeechHHHHHHHHHHHhCc--
Confidence 11 1112568999999998765521
Q ss_pred HHhccCCccccHHHHHHHHHHHHHHHHHcCCC------CeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHH
Q psy7262 657 KRKYKKDLTTNKRALRRLRTACERAKRTLSSS------TQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEK 730 (840)
Q Consensus 657 ~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~ 730 (840)
-...||++|+.+... ....+.+....+. ....+++.+|.+++.+.++++.+.+.+
T Consensus 250 -----------------~~~~AE~lK~~~g~~~~~~~~~~~~i~v~~~~~~--~~~~i~~~~l~~ii~~r~~ei~~~i~~ 310 (420)
T PRK09472 250 -----------------PPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGR--PPRSLQRQTLAEVIEPRYTELLNLVNE 310 (420)
T ss_pred -----------------CHHHHHHHHHhcceeccccCCCCceeEecCCCCC--CCeEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 135788998765421 2344555543332 235889999999999987777777764
Q ss_pred -------HHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccC------------CCChhhHHHHHHHHHHHH
Q psy7262 731 -------SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK------------SINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 731 -------~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~------------~~~p~~aVA~GAal~a~~ 790 (840)
.+..++.....++.|+|+||+|++|.|++.+++.|+ .++.. ..+|..|+|.|+++|+..
T Consensus 311 ~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f~-~~vri~~P~~~~g~~~~~~~P~~ata~Gl~~~~~~ 388 (420)
T PRK09472 311 EILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFH-TQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKE 388 (420)
T ss_pred HHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHhC-CCeEEeCCcccCCChhhcCCcHHHHHHHHHHHhhh
Confidence 456667777778999999999999999999999993 33321 248999999999999863
No 49
>KOG0103|consensus
Probab=99.78 E-value=5.8e-18 Score=189.23 Aligned_cols=199 Identities=21% Similarity=0.358 Sum_probs=166.0
Q ss_pred cEeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCC-CCeEEEEEEecCCccEEEE
Q psy7262 2 TALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRG-VPQIEVTFDIDANGILNVT 80 (840)
Q Consensus 2 ~~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G-~~~I~vtf~ld~nGil~V~ 80 (840)
..+||+|.++|.+|..+| ++...|.+.+.|......+ .....|++|.+.++.+...| ..+++|+..+|.+||+.|+
T Consensus 416 ~evF~~~~~~p~~K~lT~--~Rk~~F~lea~yt~~~~lp-~~~~kI~~~~i~~v~~~~~ge~skVKvkvr~n~~Gi~~i~ 492 (727)
T KOG0103|consen 416 TEVFPKGHPSPSVKLLTF--NRKGPFTLEAKYTKVNKLP-YPKPKIEKWTITGVTPSEDGEFSKVKVKVRLNEHGIDTIE 492 (727)
T ss_pred eeeecCCCCCCCceEEEE--EecCceEEEEEeccccccC-CCCCceeeEEecccccCccccccceeEEEEEcCccceeee
Confidence 479999999999999988 8999999999887766665 66788999999999988774 5579999999999999874
Q ss_pred EEe--------------e--------------ccc----cccceeEecc-CCCCCHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy7262 81 AIE--------------K--------------STG----KENKITITND-RGRLSKEDIERMVNDAEKYKAEDEKQKAVI 127 (840)
Q Consensus 81 a~~--------------~--------------~~~----~~~~l~i~~~-~~~ls~eei~~~~~~~~~~~~~D~~~~~~~ 127 (840)
..- . ..+ +...+.+... .+.|+..+++..++++.+|..+|+...++.
T Consensus 493 sA~~~e~~~veev~~~~~e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~l~~~~l~~~~e~E~~M~~qD~~~~Et~ 572 (727)
T KOG0103|consen 493 SATLIEDIEVEEVPEEPMEYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGALITDELELYIEKENKMILQDKLEKETV 572 (727)
T ss_pred cceeecccchhccccchhhhhcchhhhhhhccccccceeeeccccceeeeccccCHHHHHHHHHHHHHhhhhhhhhhhhc
Confidence 211 0 001 1112223222 236999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHhhccchhhhccCCHHHHHHHHHHHHHHHHHH-hhCCcccHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy7262 128 SAKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWL-DANQLAEKEEFEHKQKELEAICNPIITKLYQG 204 (840)
Q Consensus 128 eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~~~WL-d~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~ 204 (840)
++||.||+|||++|++|.+ .|..++++++++++...|+++++|| ++|++.++..|..|+.+|+++++....+.+..
T Consensus 573 D~KNaleeyVY~~R~kl~~-~y~~f~~~a~~e~~~~~l~~~E~wlyedGed~~k~~Y~~kl~elk~~g~~~r~~e~~~ 649 (727)
T KOG0103|consen 573 DAKNALEEYVYDMRDKLSD-KYEDFITDAEREKLKKMLTDTEEWLYEDGEDQTKAVYVAKLEELKKLGDKKRFDENEE 649 (727)
T ss_pred cHHHHHHHHHHHHHHHhhh-hhhhhcCHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 9999999999999999986 8999999999999999999999999 88999999999999999999998433333333
No 50
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]
Probab=99.66 E-value=3.1e-14 Score=157.42 Aligned_cols=209 Identities=26% Similarity=0.386 Sum_probs=162.7
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeecc
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIED 562 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~ 562 (840)
.-.++++|..+ -+.|.+|++.+|++...++.+|.|+|.....+. .++.+++++||||||||+++++-+.
T Consensus 156 ~vhvit~~~~~----~~Nl~k~v~r~gl~v~~i~l~plAsa~a~L~~d-------EkelGv~lIDiG~GTTdIai~~~G~ 224 (418)
T COG0849 156 EVHVITGPKNI----LENLEKCVERAGLKVDNIVLEPLASALAVLTED-------EKELGVALIDIGGGTTDIAIYKNGA 224 (418)
T ss_pred EEEEEEcchHH----HHHHHHHHHHhCCCeeeEEEehhhhhhhccCcc-------cHhcCeEEEEeCCCcEEEEEEECCE
Confidence 34466666644 456899999999999999999999998775443 3788999999999999999996431
Q ss_pred CcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchh
Q psy7262 563 GIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 642 (840)
Q Consensus 563 ~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~ 642 (840)
+. ..+..++||+
T Consensus 225 -------------------------------------------l~-------------------------~~~~ipvgG~ 236 (418)
T COG0849 225 -------------------------------------------LR-------------------------YTGVIPVGGD 236 (418)
T ss_pred -------------------------------------------EE-------------------------EEeeEeeCcc
Confidence 11 1122678999
Q ss_pred hhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCC------CeeEEEEecccCCeeeEEEEehHHHHHH
Q psy7262 643 DFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS------TQASIEIDSLFEGVDFYTSITRARFEEL 716 (840)
Q Consensus 643 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~itr~e~e~~ 716 (840)
+++..|+.-|...++ .||+.|+..... ....+.++.... +....+++.++.++
T Consensus 237 ~vT~DIa~~l~t~~~-------------------~AE~iK~~~g~a~~~~~~~~~~i~v~~vg~--~~~~~~t~~~ls~I 295 (418)
T COG0849 237 HVTKDIAKGLKTPFE-------------------EAERIKIKYGSALISLADDEETIEVPSVGS--DIPRQVTRSELSEI 295 (418)
T ss_pred HHHHHHHHHhCCCHH-------------------HHHHHHHHcCccccCcCCCcceEecccCCC--cccchhhHHHHHHH
Confidence 999999988854443 678888776542 233456655443 33678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCC-cccC----------CCChhhHHHHHHH
Q psy7262 717 NADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK-ELNK----------SINPDEAVAYGAA 785 (840)
Q Consensus 717 ~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~-~v~~----------~~~p~~aVA~GAa 785 (840)
+++.+.++..++++.|++.+....-...|+|+||++.+|.+.+..++.|+.. ++.. ..+|..+.|.|..
T Consensus 296 I~aR~~Ei~~lV~~~l~~~g~~~~~~~gvVlTGG~a~l~Gi~elA~~if~~~vRig~P~~~~Gl~d~~~~p~fs~avGl~ 375 (418)
T COG0849 296 IEARVEEILELVKAELRKSGLPNHLPGGVVLTGGGAQLPGIVELAERIFGRPVRLGVPLNIVGLTDIARNPAFSTAVGLL 375 (418)
T ss_pred HHhhHHHHHHHHHHHHHHcCccccCCCeEEEECchhcCccHHHHHHHhcCCceEeCCCccccCchhhccCchhhhhHHHH
Confidence 9999999999999999999987667788999999999999999999999421 1111 2468999999999
Q ss_pred HHHHHH
Q psy7262 786 VQAAIL 791 (840)
Q Consensus 786 l~a~~l 791 (840)
++++.+
T Consensus 376 ~~~~~~ 381 (418)
T COG0849 376 LYGALM 381 (418)
T ss_pred HHHhhc
Confidence 999864
No 51
>KOG0104|consensus
Probab=99.51 E-value=1.8e-13 Score=153.96 Aligned_cols=252 Identities=20% Similarity=0.325 Sum_probs=190.9
Q ss_pred EeecCCCCcCcceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCC-------CCCeEEEEEEecCCc
Q psy7262 3 ALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPR-------GVPQIEVTFDIDANG 75 (840)
Q Consensus 3 ~li~rnt~lP~~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~-------G~~~I~vtf~ld~nG 75 (840)
.+|++|.+||.++.++|+.+.| .+.+.++|..-+ ..+..+.|+|+..+.+ ....|+++|.+|.+|
T Consensus 452 ~lf~~~~~yPnk~vi~~~~ysd-df~~~~n~~~~~-------~nl~~velsgV~d~~kk~~~~~~~~KGIk~~F~~D~Sg 523 (902)
T KOG0104|consen 452 DLFARMSPYPNKKVITFTSYSD-DFPFNINYGDLG-------QNLTTVELSGVKDALKKNSYSDSESKGIKASFSLDLSG 523 (902)
T ss_pred HHHhcCCcCCCcceeeccccCC-ccccccchhhhc-------cCccEEEEecchHHHHhcccchhhccCceEEEEEcCcC
Confidence 4799999999998888765444 355555542211 2356899999875422 123499999999999
Q ss_pred cEEEEEEeecc--------------------------------------------cc-cc--------------------
Q psy7262 76 ILNVTAIEKST--------------------------------------------GK-EN-------------------- 90 (840)
Q Consensus 76 il~V~a~~~~~--------------------------------------------~~-~~-------------------- 90 (840)
++.|+..+..+ .+ +.
T Consensus 524 i~~v~~~evv~e~~~~~d~~~~~st~~K~~~~~e~e~~~~~~~~~e~ae~k~~ep~e~se~~ee~~~d~s~e~k~e~~t~ 603 (902)
T KOG0104|consen 524 IVLVSRVEVVFEKQKEEDSGDKKSTLSKLGSTSEGEETSDDSVQEEDAEEKGLEPSERSELEEEAEEDASQEDKTEKETS 603 (902)
T ss_pred ceEEeeeeEEEeccCCcccchhhhhhhccccccccccccccccchhhhhhhccCccccccccccccccccccccccccch
Confidence 99875432100 00 00
Q ss_pred -----------------ceeEecc---CCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhh
Q psy7262 91 -----------------KITITND---RGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLK 150 (840)
Q Consensus 91 -----------------~l~i~~~---~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~ 150 (840)
.+.|... ...|.+..++....+++.+..+|+.+.++.++.|.||.|+|.+.++|++++|.
T Consensus 604 e~~~~~~~~~~~~p~~~~~~i~~~~~~~~~l~~~~~~~~~~kl~d~~~~e~~k~~re~a~N~LE~~l~e~q~~l~d~ey~ 683 (902)
T KOG0104|consen 604 EAQKPTEKKETPAPMVVRLQIQETYPDLPVLNENALDAAVAKLEDFVQKEKEKSEREEASNELEAFLFELQDKLDDDEYA 683 (902)
T ss_pred hccCcchhhcccCcceeEeeeeeecccccCCchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCchHh
Confidence 0222211 13488999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHHH-hhCCcccHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcceeeeccccccccc
Q psy7262 151 DKISDAERTQILDKCNDVIKWL-DANQLAEKEEFEHKQKELEAICNPIITKLYQGSGGAPVQPFTTTQVLCSKLFTFHQF 229 (840)
Q Consensus 151 ~~~~~~e~~~l~~~l~e~~~WL-d~~~~a~~~~~~~kl~eL~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (840)
++.+++++..|.+.+..+.+|| |++....+..+.+++.+|++++..+..|..+. .-++.++.+|.++
T Consensus 684 e~at~EEk~~L~~~~~~~~~Wleed~~~~~t~~~~ek~a~L~~l~~~~~~R~ee~------------kq~pe~l~~l~~~ 751 (902)
T KOG0104|consen 684 EVATEEEKKILKKKVSLLMDWLEEDGSQTPTEMLTEKLAELKKLETSKNFREEER------------KQFPEELEALKNL 751 (902)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhhhhHHHHHH------------HhhhHHHHHHHHH
Confidence 9999999999999999999999 77888889999999999999999999998874 3388899999999
Q ss_pred cCCcccccccceeeccCCCccccccccccccccCCCCchhhHHHHHHHHHhcccccccc
Q psy7262 230 YPKSSCFLHNFNIVGHSSDANFESFWKGGERKKSDKNSTDLFLEVLANVIKRQKFLVTY 288 (840)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (840)
++++.+|+.+++.+ +.|-.+ |.-.|+-=++.|.++|....+....
T Consensus 752 l~~s~~~l~~~~~~---------~~~~E~-----d~~ft~~e~~~L~k~i~~t~~W~~~ 796 (902)
T KOG0104|consen 752 LNRSFSFLKQARNL---------STWEEK-----DTIFTKTEIDTLEKVIAKTTAWLND 796 (902)
T ss_pred HHHHHHHHhccccc---------cccchh-----ccchhhhhHHHHHHHHHHhHHHhhh
Confidence 99999999999988 334321 1133444456666666664444433
No 52
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=99.47 E-value=4.8e-13 Score=150.21 Aligned_cols=217 Identities=19% Similarity=0.192 Sum_probs=142.9
Q ss_pred ceEEEeeCCCCCHHHHHHHHHH-HHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDS-GTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~A-a~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+++++|..++..+|+.+.+. .+..|++.+.++.+|.+|+++++ ..+.+|||+|+|+|+++.+--+
T Consensus 96 ~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~g------------~~~~lVVDiG~~~t~i~pv~~G 163 (371)
T cd00012 96 HPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYASG------------RTTGLVVDSGDGVTHVVPVYDG 163 (371)
T ss_pred CceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhcC------------CCeEEEEECCCCeeEEEEEECC
Confidence 6899999999998888887764 67799999999999999999873 3577999999999999877422
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
. + +........+||
T Consensus 164 ~--------------------------------------------~----------------------~~~~~~~~~~GG 177 (371)
T cd00012 164 Y--------------------------------------------V----------------------LPHAIKRLDLAG 177 (371)
T ss_pred E--------------------------------------------E----------------------chhhheeccccH
Confidence 1 0 000111257899
Q ss_pred hhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCe---------------eEEEEecccCCeeeEE
Q psy7262 642 EDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ---------------ASIEIDSLFEGVDFYT 706 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~---------------~~i~i~~~~~~~~~~~ 706 (840)
.++|+.|.+.+..... ..... .-...++..|+.+..-.. ..... .+.++ ..+
T Consensus 178 ~~l~~~l~~~l~~~~~---~~~~~-------~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~-~lpd~--~~i 244 (371)
T cd00012 178 RDLTRYLKELLRERGY---ELNSS-------DEREIVRDIKEKLCYVALDIEEEQDKSAKETSLLEKTY-ELPDG--RTI 244 (371)
T ss_pred HHHHHHHHHHHHhcCC---Cccch-------hHHHHHHHHHHhheeecCCHHHHHHhhhccCCccceeE-ECCCC--eEE
Confidence 9999999988754321 00000 112234555555432100 00111 11122 245
Q ss_pred EEehHHHH---HHHHH-----HHHHHHHHHHHHHHHcCCC--ccCccEEEEEcCCCCcHHHHHHHHhHcC----C-----
Q psy7262 707 SITRARFE---ELNAD-----LFRGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFN----G----- 767 (840)
Q Consensus 707 ~itr~e~e---~~~~~-----~i~~i~~~i~~~l~~a~~~--~~~Id~V~LvGG~s~~p~v~~~l~~~f~----~----- 767 (840)
.+..+.|. .++.| ....+.+.|.+++...... ..-++.|+|+||+|++|.+.++|++.+. .
T Consensus 245 ~~~~er~~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~~~~~ 324 (371)
T cd00012 245 KVGNERFRAPEILFNPSLIGSEQVGISEAIYSSINKCDIDLRKDLYSNIVLSGGSTLFPGFGERLQKELLKLAPPSKDTK 324 (371)
T ss_pred EEChHHhhChHhcCChhhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCEEEeCCccCCcCHHHHHHHHHHHhCCcccceE
Confidence 56655442 34444 2347778888888775432 2346789999999999999999998873 2
Q ss_pred CcccCCCChhhHHHHHHHHHHHH
Q psy7262 768 KELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 768 ~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
..+....+|..++-.||.++|..
T Consensus 325 ~~~~~~~~~~~~aw~G~si~as~ 347 (371)
T cd00012 325 VKVIAPPERKYSVWLGGSILASL 347 (371)
T ss_pred EEEccCCCccccEEeCchhhcCc
Confidence 12345568899999999999954
No 53
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=99.38 E-value=3.5e-12 Score=143.34 Aligned_cols=236 Identities=19% Similarity=0.197 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHh
Q psy7262 448 EVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAY 526 (840)
Q Consensus 448 ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y 526 (840)
+.+..+++++... .++... .-..++++.|...+..+|+.+.+.+ +..|++.+.++.+|.+|++++
T Consensus 75 ~~~e~i~~~~~~~---~l~~~~-----------~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~~~v~~~~~~~~a~~~~ 140 (373)
T smart00268 75 DDMEKIWDYTFFN---ELRVEP-----------EEHPVLLTEPPMNPKSNREKILEIMFETFNFPALYIAIQAVLSLYAS 140 (373)
T ss_pred HHHHHHHHHHHhh---hcCCCC-----------ccCeeEEecCCCCCHHHHHHHHHHhhccCCCCeEEEeccHHHHHHhC
Confidence 6677777777654 222211 1157999999999999999998887 577999999999999999887
Q ss_pred hcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceE
Q psy7262 527 GLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNV 606 (840)
Q Consensus 527 ~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v 606 (840)
+ ..+.||||+|+|+|+++.+--+.
T Consensus 141 g------------~~~~lVVDiG~~~t~v~pv~~G~-------------------------------------------- 164 (373)
T smart00268 141 G------------RTTGLVIDSGDGVTHVVPVVDGY-------------------------------------------- 164 (373)
T ss_pred C------------CCEEEEEecCCCcceEEEEECCE--------------------------------------------
Confidence 3 45789999999999998874211
Q ss_pred EEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcC
Q psy7262 607 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLS 686 (840)
Q Consensus 607 ~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls 686 (840)
.+ ........+||.++|+.|.+++...- ...... .-...++..|+.+.
T Consensus 165 ~~----------------------~~~~~~~~~GG~~l~~~l~~~l~~~~---~~~~~~-------~~~~~~~~iKe~~~ 212 (373)
T smart00268 165 VL----------------------PHAIKRIDIAGRDLTDYLKELLSERG---YQFNSS-------AEFEIVREIKEKLC 212 (373)
T ss_pred Ec----------------------hhhheeccCcHHHHHHHHHHHHHhcC---CCCCcH-------HHHHHHHHhhhhee
Confidence 00 00011157899999999988775410 000000 01123344444432
Q ss_pred CC-------------------CeeEEEEecccCCeeeEEEEehHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC-
Q psy7262 687 SS-------------------TQASIEIDSLFEGVDFYTSITRARF---EELNADL-----FRGTMEPVEKSLRDAKMD- 738 (840)
Q Consensus 687 ~~-------------------~~~~i~i~~~~~~~~~~~~itr~e~---e~~~~~~-----i~~i~~~i~~~l~~a~~~- 738 (840)
.- ....+. +.++.. +.+..+.+ |.++.|. ...+.+.|.+++..+...
T Consensus 213 ~v~~~~~~~~~~~~~~~~~~~~~~~~~---lpdg~~--~~~~~er~~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~d~ 287 (373)
T smart00268 213 YVAEDFEKEMKKARESSESSKLEKTYE---LPDGNT--IKVGNERFRIPEILFKPELIGLEQKGIHELVYESIQKCDIDV 287 (373)
T ss_pred eecCChHHHHHHhhhcccccccceeEE---CCCCCE--EEEChHHeeCchhcCCchhcCCCcCCHHHHHHHHHHhCCHhH
Confidence 10 011111 122222 33443333 2334432 246778888888765422
Q ss_pred -ccCccEEEEEcCCCCcHHHHHHHHhHc----CC---CcccCCCChhhHHHHHHHHHHHH
Q psy7262 739 -KAQIHDIVLVGGSTRIPKVQKLLQDFF----NG---KELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 739 -~~~Id~V~LvGG~s~~p~v~~~l~~~f----~~---~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
..-.+.|+|+||+|++|.+.++|.+.+ |. ..+..+.++..++=.||+++|..
T Consensus 288 r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p~~~~v~v~~~~~~~~~~W~G~silas~ 347 (373)
T smart00268 288 RKDLYENIVLSGGSTLIPGFGERLEKELKQLAPKKLKVKVIAPPERKYSVWLGGSILASL 347 (373)
T ss_pred HHHHHhCeEeecccccCcCHHHHHHHHHHHhCCCCceeEEecCCCCccceEeCcccccCc
Confidence 223467999999999999999998877 21 13444556778888898888753
No 54
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=99.33 E-value=1.4e-10 Score=127.90 Aligned_cols=213 Identities=14% Similarity=0.203 Sum_probs=134.2
Q ss_pred ceEEEeeCCCCCHHHH-HHHHHHHHHc------------CCcEEEeecchHHHHHHhhcccccCC-CCCCCCceEEEEec
Q psy7262 483 SNAVITVPAYFNDSQR-QATKDSGTIA------------GLNVLRIINEPTAAAIAYGLDKKVGS-TAGSGERNVLIFDL 548 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r-~~l~~Aa~~A------------G~~~v~~v~Ep~AAAl~y~~~~~~~~-~~~~~~~~vLVvDi 548 (840)
..++.+.|+.+...++ +.+++..... -+..+.+++||.+|.+++..+..... ........++||||
T Consensus 113 v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~ilvIDI 192 (344)
T PRK13917 113 VVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGVKVVAQPMGTLLDLYLDNDGVVADKAFEEGKVSVIDF 192 (344)
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEEEEecccHHHHHHHHhcccCcccchhcccCcEEEEEc
Confidence 3556699999865443 6677655321 12457889999999887766532100 01123456899999
Q ss_pred CCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeE
Q psy7262 549 GGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIF 628 (840)
Q Consensus 549 GGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~ 628 (840)
|+||||+++++-.. +
T Consensus 193 G~~TtD~~v~~~~~-----------------------------------------------------------------~ 207 (344)
T PRK13917 193 GSGTTDLDTIQNLK-----------------------------------------------------------------R 207 (344)
T ss_pred CCCcEEEEEEeCcE-----------------------------------------------------------------E
Confidence 99999999874210 0
Q ss_pred EEEEeeCCCCCchhhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEE
Q psy7262 629 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSI 708 (840)
Q Consensus 629 ~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~i 708 (840)
+....+....|...+.+.+.+++... ..+..+ +.. ++ +++ |... .+.+. .+. .+.+
T Consensus 208 -~~~~s~s~~~G~~~~~~~I~~~i~~~---~~~~~~--~~~---~i----e~~---l~~g---~i~~~---~~~--~id~ 263 (344)
T PRK13917 208 -VEEESFVIPKGTIDVYKRIASHISKK---EEGASI--TPY---ML----EKG---LEYG---ACKLN---QKT--VIDF 263 (344)
T ss_pred -cccccccccchHHHHHHHHHHHHHhh---CCCCCC--CHH---HH----HHH---HHcC---cEEeC---CCc--eEeh
Confidence 01112225678888888887777432 212211 111 11 111 2111 11111 111 1223
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHH
Q psy7262 709 TRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 709 tr~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a 788 (840)
++++.++++++++++.+.|...+.. ..+++.|+|+||++++ +++.|++.||.. ....||..|.|+|...+|
T Consensus 264 -~~~~~~~~~~~~~~i~~~i~~~~~~----~~~~d~IiL~GGGA~l--l~~~lk~~f~~~--~~~~~p~~ANa~G~~~~g 334 (344)
T PRK13917 264 -KDEFYKEQDSVIDEVMSGFEIAVGN----INSFDRVIVTGGGANI--FFDSLSHWYSDV--EKADESQFANVRGYYKYG 334 (344)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCEEEEECCcHHH--HHHHHHHHcCCe--EEcCChHHHHHHHHHHHH
Confidence 4567778888888888888877753 3478999999999986 899999999754 456799999999999999
Q ss_pred HHHcC
Q psy7262 789 AILHG 793 (840)
Q Consensus 789 ~~l~~ 793 (840)
..+.+
T Consensus 335 ~~~~~ 339 (344)
T PRK13917 335 ELLKN 339 (344)
T ss_pred HHHhc
Confidence 76654
No 55
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=99.33 E-value=1.1e-12 Score=126.04 Aligned_cols=195 Identities=25% Similarity=0.369 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccc
Q psy7262 452 MVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKK 531 (840)
Q Consensus 452 ~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~ 531 (840)
.+.+.+++.+++.+|... .+..=++|..-.....+...+..+.||++.+..++||+|||.-..++
T Consensus 76 eiVrrlkd~lEk~lGi~~-------------tha~taiPPGt~~~~~ri~iNViESAGlevl~vlDEPTAaa~vL~l~-- 140 (277)
T COG4820 76 EIVRRLKDTLEKQLGIRF-------------THAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADVLQLD-- 140 (277)
T ss_pred HHHHHHHHHHHHhhCeEe-------------eeccccCCCCccCCCceEEEEeecccCceeeeecCCchhHHHHhccC--
Confidence 456788899999999877 67777788888777778888889999999999999999998755433
Q ss_pred cCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEc
Q psy7262 532 VGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDL 611 (840)
Q Consensus 532 ~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~ 611 (840)
+-.|||+|||||-||+++-+.-+.
T Consensus 141 ----------dg~VVDiGGGTTGIsi~kkGkViy---------------------------------------------- 164 (277)
T COG4820 141 ----------DGGVVDIGGGTTGISIVKKGKVIY---------------------------------------------- 164 (277)
T ss_pred ----------CCcEEEeCCCcceeEEEEcCcEEE----------------------------------------------
Confidence 236899999999999998653111
Q ss_pred CCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCee
Q psy7262 612 GGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQA 691 (840)
Q Consensus 612 Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~ 691 (840)
..+...||.++...|+-.. +. -...+|..|..-..
T Consensus 165 ----------------------~ADEpTGGtHmtLvlAG~y--------gi-----------~~EeAE~~Kr~~k~---- 199 (277)
T COG4820 165 ----------------------SADEPTGGTHMTLVLAGNY--------GI-----------SLEEAEQYKRGHKK---- 199 (277)
T ss_pred ----------------------eccCCCCceeEEEEEeccc--------Cc-----------CHhHHHHhhhcccc----
Confidence 1112333333333222111 11 01234444433211
Q ss_pred EEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCccc
Q psy7262 692 SIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN 771 (840)
Q Consensus 692 ~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~ 771 (840)
.+|.-..+.|+++++.+.+...++..+ +..++|+||+|.-|.+.+.+++.| ..++.
T Consensus 200 ------------------~~Eif~~v~PV~eKMAeIv~~hie~~~-----i~dl~lvGGac~~~g~e~~Fe~~l-~l~v~ 255 (277)
T COG4820 200 ------------------GEEIFPVVKPVYEKMAEIVARHIEGQG-----ITDLWLVGGACMQPGVEELFEKQL-ALQVH 255 (277)
T ss_pred ------------------chhcccchhHHHHHHHHHHHHHhccCC-----CcceEEecccccCccHHHHHHHHh-ccccc
Confidence 112223457888888888888887755 557999999999999999999999 88999
Q ss_pred CCCChhhHHHHHHHH
Q psy7262 772 KSINPDEAVAYGAAV 786 (840)
Q Consensus 772 ~~~~p~~aVA~GAal 786 (840)
.|..|....-.|.|+
T Consensus 256 ~P~~p~y~TPLgIA~ 270 (277)
T COG4820 256 LPQHPLYMTPLGIAS 270 (277)
T ss_pred cCCCcceechhhhhh
Confidence 999998888787774
No 56
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=99.18 E-value=9.9e-10 Score=120.52 Aligned_cols=207 Identities=18% Similarity=0.194 Sum_probs=124.0
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHHHHc---------CCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCce
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSGTIA---------GLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTF 553 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa~~A---------G~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTt 553 (840)
..+|++.|..+...+++.+++..... -++.+.+++||.+|.+++..+.. ........++||||||+|+
T Consensus 103 ~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~~~~---~~~~~~~~~lVIDIG~~Tt 179 (320)
T TIGR03739 103 DQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVAQHG---KLLTGKEQSLIIDPGYFTF 179 (320)
T ss_pred CEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHhcCC---CcccCcCcEEEEecCCCee
Confidence 57999999999988999999987532 34678899999999888765432 1112456789999999999
Q ss_pred EEEEEeeccCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEe
Q psy7262 554 DVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKST 633 (840)
Q Consensus 554 Dis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~ 633 (840)
|+.+++-. .+ +...
T Consensus 180 D~~~~~~~-----------------------------------------------------------------~~-~~~~ 193 (320)
T TIGR03739 180 DWLVARGM-----------------------------------------------------------------RL-VQKR 193 (320)
T ss_pred eeehccCC-----------------------------------------------------------------EE-cccc
Confidence 99766311 00 0111
Q ss_pred eCCCCCchhhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHH
Q psy7262 634 AGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARF 713 (840)
Q Consensus 634 ~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~ 713 (840)
.+....|-..+-+.+.+.+.++ ++........ .+-...+.-| . +.+ .+. .+.|+ +.+
T Consensus 194 s~s~~~G~~~~~~~I~~~i~~~----~g~~~~~~~~---~i~~~l~~g~-------~--~~~----~gk--~~di~-~~~ 250 (320)
T TIGR03739 194 SGSVNGGMSDIYRLLAAEISKD----IGTPAYRDID---RIDLALRTGK-------Q--PRI----YQK--PVDIK-RCL 250 (320)
T ss_pred cCCchhHHHHHHHHHHHHHHhh----cCCCCccCHH---HHHHHHHhCC-------c--eee----cce--ecCch-HHH
Confidence 2224567666666666655543 3332101111 1111111111 0 000 011 12232 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHH
Q psy7262 714 EELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 714 e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a 788 (840)
+ .....++.+...|...+ + ...+++.|+|+||++. .+++.|++.||...+....||..|.|+|-..++
T Consensus 251 ~-~~~~~~~~~v~~i~~~~---~-~~~~~~~Iil~GGGa~--ll~~~l~~~f~~~~i~~~~dp~~ANarG~~~~g 318 (320)
T TIGR03739 251 E-LAETVAQQAVSTMMTWI---G-APESIQNIVLVGGGAF--LFKKAVKAAFPKHRIVEVDEPMFANVRGFQIAG 318 (320)
T ss_pred H-HHHHHHHHHHHHHHHhc---c-cCCcccEEEEeCCcHH--HHHHHHHHHCCCCeeEecCCcHHHHHHHHHHhh
Confidence 2 22333333333333333 1 2245889999999998 678999999988777677899999999987665
No 57
>PTZ00280 Actin-related protein 3; Provisional
Probab=99.13 E-value=2.6e-09 Score=121.53 Aligned_cols=205 Identities=18% Similarity=0.160 Sum_probs=127.0
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+++|.|..++..+|+.|.+.+ +..+++.+.+..+|.+|++++...... .......+-||||+|.|+|+++.+--+
T Consensus 103 ~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~--~~~~g~~tglVVDiG~~~T~i~PV~~G 180 (414)
T PTZ00280 103 HYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKA--KELGGTLTGTVIDSGDGVTHVIPVVDG 180 (414)
T ss_pred CceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccc--cccCCceeEEEEECCCCceEEEEEECC
Confidence 46899999999999999987776 455999999999999998876332111 001123356999999999998765321
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
. + +.....-..+||
T Consensus 181 ~--------------------------------------------~----------------------l~~~~~~~~~GG 194 (414)
T PTZ00280 181 Y--------------------------------------------V----------------------IGSSIKHIPLAG 194 (414)
T ss_pred E--------------------------------------------E----------------------cccceEEecCcH
Confidence 0 0 000001146899
Q ss_pred hhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCC-----------------eeEEEEecccCCeee
Q psy7262 642 EDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST-----------------QASIEIDSLFEGVDF 704 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------------~~~i~i~~~~~~~~~ 704 (840)
.++++.|.+.|.+. +..+... .....++..|+.+.... ...+.+.....+...
T Consensus 195 ~~lt~~L~~lL~~~-----~~~~~~~-----~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~d~~~g~~~ 264 (414)
T PTZ00280 195 RDITNFIQQMLRER-----GEPIPAE-----DILLLAQRIKEKYCYVAPDIAKEFEKYDSDPKNHFKKYTAVNSVTKKPY 264 (414)
T ss_pred HHHHHHHHHHHHHc-----CCCCCcH-----HHHHHHHHHHHhcCcccCcHHHHHHHhhcCcccccceEECCCCCCCCcc
Confidence 99999999887542 1111111 01123455555543210 011222222223334
Q ss_pred EEEEehHHHH---HHHHHHH------HHHHHHHHHHHHHcCCC--ccCccEEEEEcCCCCcHHHHHHHHhHc
Q psy7262 705 YTSITRARFE---ELNADLF------RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF 765 (840)
Q Consensus 705 ~~~itr~e~e---~~~~~~i------~~i~~~i~~~l~~a~~~--~~~Id~V~LvGG~s~~p~v~~~l~~~f 765 (840)
.+.|..+.|. -++.|.+ ..+.++|.+++.++... ..-.+.|+|+||+|.+|.+.++|++.+
T Consensus 265 ~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI~~~~~d~r~~L~~nIvL~GG~s~~~Gf~eRL~~El 336 (414)
T PTZ00280 265 TVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSCPIDCRRPLYKNIVLSGGSTMFKGFDKRLQRDV 336 (414)
T ss_pred EEEechHHhcCcccccChhhcCCccCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCcccCcCHHHHHHHHH
Confidence 6777777774 3555532 25677888888776433 223577999999999999999998877
No 58
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=99.04 E-value=4.9e-09 Score=118.79 Aligned_cols=224 Identities=20% Similarity=0.246 Sum_probs=132.6
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..++++.|..++...|+.|.+.+ +..|++.+.++.+|.+|+++++. .+-||||+|.+.|.++.+--+
T Consensus 95 ~~vll~~~~~~~~~~r~~l~e~lfE~~~~~~v~~~~~~~~a~~~~g~------------~tglVVD~G~~~t~v~pV~dG 162 (393)
T PF00022_consen 95 HPVLLTEPPFNPRSQREKLAEILFEKFGVPSVYFIPSPLLALYASGR------------TTGLVVDIGYSSTSVVPVVDG 162 (393)
T ss_dssp SEEEEEESTT--HHHHHHHHHHHHHTS--SEEEEEEHHHHHHHHTTB------------SSEEEEEESSS-EEEEEEETT
T ss_pred ceeeeeccccCCchhhhhhhhhhhcccccceeeeeeccccccccccc------------ccccccccceeeeeeeeeeec
Confidence 68999999999999998877766 57799999999999999887743 356999999999988766311
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
- ++. .......+||
T Consensus 163 ~-~~~-----------------------------------------------------------------~~~~~~~~GG 176 (393)
T PF00022_consen 163 Y-VLP-----------------------------------------------------------------HSIKRSPIGG 176 (393)
T ss_dssp E-E-G-----------------------------------------------------------------GGBEEES-SH
T ss_pred c-ccc-----------------------------------------------------------------cccccccccH
Confidence 0 000 0001146899
Q ss_pred hhhhhHHHHHHHHHH-H--HhccCCcc----ccHHHHHHHHHHHHHHHHHc---------------CCCCeeEEEEeccc
Q psy7262 642 EDFDNRMVNHFVQEF-K--RKYKKDLT----TNKRALRRLRTACERAKRTL---------------SSSTQASIEIDSLF 699 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~-~--~~~~~~~~----~~~~~~~~L~~~~e~~K~~L---------------s~~~~~~i~i~~~~ 699 (840)
.+++..+.+.|..+- . ..+..... ........-...++..|+.+ .......+.++
T Consensus 177 ~~lt~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~lP--- 253 (393)
T PF00022_consen 177 DDLTEYLKELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIVEEIKEECCYVSEDPDEEQEEQASENPEKSYELP--- 253 (393)
T ss_dssp HHHHHHHHHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHHHHHHHHHHSGGSSHHHHHHHHHCSTTTEEEE-T---
T ss_pred HHHHHHHHHHHHhhccccccccccccccccccccccchhhhccchhccchhhhcccccccccccccccccceecccc---
Confidence 999999988887631 0 00000000 00000001111222333221 12222333332
Q ss_pred CCeeeEEEEehHHHH---HHHHHHH------------HHHHHHHHHHHHHcCCCcc--CccEEEEEcCCCCcHHHHHHHH
Q psy7262 700 EGVDFYTSITRARFE---ELNADLF------------RGTMEPVEKSLRDAKMDKA--QIHDIVLVGGSTRIPKVQKLLQ 762 (840)
Q Consensus 700 ~~~~~~~~itr~e~e---~~~~~~i------------~~i~~~i~~~l~~a~~~~~--~Id~V~LvGG~s~~p~v~~~l~ 762 (840)
++. .+.+..+.+. -++.|.. ..+.++|.+++........ -.+.|+|+||+|.+|.+.++|.
T Consensus 254 dg~--~i~~~~er~~~~E~LF~p~~~~~~~~~~~~~~~gL~~~I~~si~~~~~d~r~~l~~nIvl~GG~S~i~G~~eRL~ 331 (393)
T PF00022_consen 254 DGQ--TIILGKERFRIPEILFNPSLIGIDSASEPSEFMGLPELILDSISKCPIDLRKELLSNIVLTGGSSLIPGFKERLQ 331 (393)
T ss_dssp TSS--EEEESTHHHHHHHTTTSGGGGTSSSTS---SSSCHHHHHHHHHHTSTTTTHHHHHTTEEEESGGGGSTTHHHHHH
T ss_pred ccc--ccccccccccccccccccccccccccccccccchhhhhhhhhhhccccccccccccceEEecccccccchHHHHH
Confidence 222 4566665553 2333322 1577888888887654322 2478999999999999999998
Q ss_pred hHcCC-------CcccCCC-ChhhHHHHHHHHHHH
Q psy7262 763 DFFNG-------KELNKSI-NPDEAVAYGAAVQAA 789 (840)
Q Consensus 763 ~~f~~-------~~v~~~~-~p~~aVA~GAal~a~ 789 (840)
+.+.. .++..+. +|..++=.||+++|.
T Consensus 332 ~eL~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilas 366 (393)
T PF00022_consen 332 QELRSLLPSSTKVKVIAPPSDRQFAAWIGGSILAS 366 (393)
T ss_dssp HHHHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHT
T ss_pred HHhhhhhhccccceeccCchhhhhcccccceeeec
Confidence 77622 2445555 899999999999995
No 59
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=98.95 E-value=9.1e-09 Score=112.65 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcC--CCcccCCCChhhHHHHHHH
Q psy7262 711 ARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSINPDEAVAYGAA 785 (840)
Q Consensus 711 ~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~--~~~v~~~~~p~~aVA~GAa 785 (840)
+++.+.++..++++.+.|.+.+. ...+++.|+||||++. .+.+.|++.++ ...+....||+.|-|+|-+
T Consensus 246 ~~v~~~i~~~~~~l~~~i~~~~~----~~~~~~~I~~vGGGA~--ll~~~Ik~~~~~~~~~i~i~~~pqfAnv~G~~ 316 (318)
T PF06406_consen 246 DDVSEVIEEAVEELINRILRELG----DFSDIDRIFFVGGGAI--LLKDAIKEAFPVPNERIVIVDDPQFANVRGFY 316 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT----TS-S-SEEEEESTTHH--HHHHHHHHHHT--GGGEE--SSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----hhccCCeEEEECCcHH--HHHHHHHHhhCCCCCcEEECCCchhhHHHHHh
Confidence 34445555555555555554443 2346889999999986 68999999985 4577888899999999965
No 60
>PTZ00004 actin-2; Provisional
Probab=98.91 E-value=3.1e-08 Score=111.35 Aligned_cols=214 Identities=17% Similarity=0.199 Sum_probs=134.4
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+++|-|..+...+|+.+.+.+ +..|++.+.++.+|.+|+++++ ..+-||||+|.++|+++.+--+
T Consensus 102 ~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g------------~~tglVVDiG~~~t~v~pV~dG 169 (378)
T PTZ00004 102 HPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASG------------RTTGIVLDSGDGVSHTVPIYEG 169 (378)
T ss_pred CcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcC------------CceEEEEECCCCcEEEEEEECC
Confidence 57889999999999998776655 6689999999999999987762 2356999999999988765211
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
.. +.......++||
T Consensus 170 --------------------------------------------~~----------------------l~~~~~~~~~GG 183 (378)
T PTZ00004 170 --------------------------------------------YS----------------------LPHAIHRLDVAG 183 (378)
T ss_pred --------------------------------------------EE----------------------eecceeeecccH
Confidence 00 000111146899
Q ss_pred hhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCC---------------C--eeEEEEecccCCeee
Q psy7262 642 EDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS---------------T--QASIEIDSLFEGVDF 704 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~---------------~--~~~i~i~~~~~~~~~ 704 (840)
.+++..|.+.|... +..+... .. ...++..|+.+... . ...+. +.++.
T Consensus 184 ~~lt~~L~~lL~~~-----~~~~~~~--~~---~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~~y~---lPdg~-- 248 (378)
T PTZ00004 184 RDLTEYMMKILHER-----GTTFTTT--AE---KEIVRDIKEKLCYIALDFDEEMGNSAGSSDKYEESYE---LPDGT-- 248 (378)
T ss_pred HHHHHHHHHHHHhc-----CCCCCcH--HH---HHHHHHHhhcceeecCCHHHHHhhhhcCccccceEEE---CCCCC--
Confidence 99999988877432 1111111 00 11233444433210 0 11222 22332
Q ss_pred EEEEehHHHH---HHHHHH------HHHHHHHHHHHHHHcCCC--ccCccEEEEEcCCCCcHHHHHHHHhHc----CC--
Q psy7262 705 YTSITRARFE---ELNADL------FRGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF----NG-- 767 (840)
Q Consensus 705 ~~~itr~e~e---~~~~~~------i~~i~~~i~~~l~~a~~~--~~~Id~V~LvGG~s~~p~v~~~l~~~f----~~-- 767 (840)
.+.+..+.|. -++.|. ...+.++|.+++.++..+ ..-...|+|+||+|.+|.+.++|+..+ |.
T Consensus 249 ~i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~EL~~~~p~~~ 328 (378)
T PTZ00004 249 IITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGNIVLSGGTTMYRGLPERLTKELTTLAPSTM 328 (378)
T ss_pred EEEEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCChhHHHHHHhhEEeccchhcCcCHHHHHHHHHHHhCCCCc
Confidence 3456665553 355553 235667788887776433 223477999999999999999998776 21
Q ss_pred -CcccCCCChhhHHHHHHHHHHH
Q psy7262 768 -KELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 768 -~~v~~~~~p~~aVA~GAal~a~ 789 (840)
.++..+.++..++=.||+++|.
T Consensus 329 ~~~v~~~~~~~~~aW~Ggsilas 351 (378)
T PTZ00004 329 KIKVVAPPERKYSVWIGGSILSS 351 (378)
T ss_pred cEEEecCCCCceeEEECcccccC
Confidence 1344455677788889888875
No 61
>PTZ00452 actin; Provisional
Probab=98.90 E-value=6.5e-08 Score=108.34 Aligned_cols=214 Identities=16% Similarity=0.202 Sum_probs=132.9
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+++|-|..++..+|+.|.+.+ +..+++.+.+...|.+++++++ ..+-||||+|.|.|.++-+--+
T Consensus 101 ~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g------------~~tglVVDiG~~~t~v~PV~dG 168 (375)
T PTZ00452 101 QPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSG------------KTIGLVVDSGEGVTHCVPVFEG 168 (375)
T ss_pred CceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCC------------CceeeeecCCCCcceEEEEECC
Confidence 57899999999999999987766 5578899999999999987662 2356999999999988765311
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
- -+........+||
T Consensus 169 ~------------------------------------------------------------------~l~~~~~r~~~gG 182 (375)
T PTZ00452 169 H------------------------------------------------------------------QIPQAITKINLAG 182 (375)
T ss_pred E------------------------------------------------------------------EeccceEEeeccc
Confidence 0 0000011145789
Q ss_pred hhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCC--------------C--eeEEEEecccCCeeeE
Q psy7262 642 EDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS--------------T--QASIEIDSLFEGVDFY 705 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~--------------~--~~~i~i~~~~~~~~~~ 705 (840)
.++++.|.+.|... +..+.... . ...++..|+.+... . ...+.+ .++. .
T Consensus 183 ~~lt~~L~~lL~~~-----~~~~~~~~-~----~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~y~L---PDg~--~ 247 (375)
T PTZ00452 183 RLCTDYLTQILQEL-----GYSLTEPH-Q----RIIVKNIKERLCYTALDPQDEKRIYKESNSQDSPYKL---PDGN--I 247 (375)
T ss_pred hHHHHHHHHHHHhc-----CCCCCCHH-H----HHHHHHHHHHhccccCcHHHHHHHhhccCCcCceEEC---CCCC--E
Confidence 88888887766421 11111100 0 01133344433211 0 112222 2332 3
Q ss_pred EEEehHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCC--ccCccEEEEEcCCCCcHHHHHHHHhHc----CC-C--
Q psy7262 706 TSITRARFE---ELNADLF-----RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF----NG-K-- 768 (840)
Q Consensus 706 ~~itr~e~e---~~~~~~i-----~~i~~~i~~~l~~a~~~--~~~Id~V~LvGG~s~~p~v~~~l~~~f----~~-~-- 768 (840)
+.+..+.|. -++.|.+ ..+.++|.+++..+... ..-.+.|+|+||+|.+|.+.++|++.+ |. .
T Consensus 248 i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~~~v 327 (375)
T PTZ00452 248 LTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFPGIANRLSNELTNLVPSQLKI 327 (375)
T ss_pred EEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHHhhccEEEecccccccCHHHHHHHHHHHhCCCCcee
Confidence 566666663 3555543 25667777777765432 223578999999999999999998776 22 1
Q ss_pred cccCCCChhhHHHHHHHHHHH
Q psy7262 769 ELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 769 ~v~~~~~p~~aVA~GAal~a~ 789 (840)
++..+.++..++=.|+.++|.
T Consensus 328 ~v~~~~~r~~~aW~GgSilas 348 (375)
T PTZ00452 328 QVAAPPDRRFSAWIGGSIQCT 348 (375)
T ss_pred EEecCCCcceeEEECchhhcC
Confidence 244445666777889988885
No 62
>PTZ00281 actin; Provisional
Probab=98.89 E-value=2.7e-08 Score=111.62 Aligned_cols=216 Identities=18% Similarity=0.225 Sum_probs=135.4
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+++|-|..+...+|+.|.+.+ +..+++.+.+...|.+++++++ ..+-||||+|.+.|.++-+--+
T Consensus 102 ~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g------------~~tglVVDiG~~~t~v~PV~dG 169 (376)
T PTZ00281 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG------------RTTGIVMDSGDGVSHTVPIYEG 169 (376)
T ss_pred CeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcC------------CceEEEEECCCceEEEEEEEec
Confidence 57899999999999999988754 6689999999999999987662 2366999999999987654221
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
-. +........+||
T Consensus 170 ~~------------------------------------------------------------------~~~~~~~~~~GG 183 (376)
T PTZ00281 170 YA------------------------------------------------------------------LPHAILRLDLAG 183 (376)
T ss_pred cc------------------------------------------------------------------chhheeeccCcH
Confidence 00 000111156899
Q ss_pred hhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCC--------------eeEEEEecccCCeeeEEE
Q psy7262 642 EDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST--------------QASIEIDSLFEGVDFYTS 707 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~--------------~~~i~i~~~~~~~~~~~~ 707 (840)
.++++.|.+.|... +..+... .. ...++..|+.+..-. ....... +.++. .+.
T Consensus 184 ~~lt~~L~~lL~~~-----~~~~~~~--~~---~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~y~-LPdg~--~i~ 250 (376)
T PTZ00281 184 RDLTDYMMKILTER-----GYSFTTT--AE---REIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYE-LPDGQ--VIT 250 (376)
T ss_pred HHHHHHHHHHHHhc-----CCCCCcH--HH---HHHHHHHHHhcEEecCCchHHHHhhhcCcccceeEE-CCCCC--EEE
Confidence 99999888776432 1111110 00 123445555543111 0011111 22222 355
Q ss_pred EehHHH---HHHHHHHH-----HHHHHHHHHHHHHcCCC--ccCccEEEEEcCCCCcHHHHHHHHhHc----CC---Ccc
Q psy7262 708 ITRARF---EELNADLF-----RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF----NG---KEL 770 (840)
Q Consensus 708 itr~e~---e~~~~~~i-----~~i~~~i~~~l~~a~~~--~~~Id~V~LvGG~s~~p~v~~~l~~~f----~~---~~v 770 (840)
|..+.| |.++.|.+ ..+.++|.+++..+... ..-.+.|+|+||+|.+|.+.++|++.+ |. .++
T Consensus 251 i~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~El~~~~p~~~~v~v 330 (376)
T PTZ00281 251 IGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKI 330 (376)
T ss_pred eeHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCChhHHHHHHhhccccCccccCcCHHHHHHHHHHHhCCCCcceEE
Confidence 665555 24555533 25667777777765432 223468999999999999999988776 22 134
Q ss_pred cCCCChhhHHHHHHHHHHH
Q psy7262 771 NKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 771 ~~~~~p~~aVA~GAal~a~ 789 (840)
..+.++..++=.||.++|+
T Consensus 331 ~~~~~r~~~aW~Ggsilas 349 (376)
T PTZ00281 331 IAPPERKYSVWIGGSILAS 349 (376)
T ss_pred ecCCCCceeEEECcccccC
Confidence 4555777888899998885
No 63
>PTZ00466 actin-like protein; Provisional
Probab=98.80 E-value=2.1e-07 Score=104.35 Aligned_cols=216 Identities=16% Similarity=0.158 Sum_probs=134.0
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+++|-|..+...+|+.|.+.+ +..+++.+.+..+|.+|+++++ ..+-+|||+|.+.|.+.-+--+
T Consensus 107 ~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~lsl~a~g------------~~tglVVD~G~~~t~v~PV~~G 174 (380)
T PTZ00466 107 HPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILSLYSCG------------KTNGTVLDCGDGVCHCVSIYEG 174 (380)
T ss_pred CeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHHHHhcC------------CceEEEEeCCCCceEEEEEECC
Confidence 57889999999999999986655 6678999999999999987762 2466999999999987654211
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
- .+........+||
T Consensus 175 ~------------------------------------------------------------------~~~~~~~~~~~GG 188 (380)
T PTZ00466 175 Y------------------------------------------------------------------SITNTITRTDVAG 188 (380)
T ss_pred E------------------------------------------------------------------EeecceeEecCch
Confidence 0 0000111146899
Q ss_pred hhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCC-------------CeeEEEEecccCCeeeEEEE
Q psy7262 642 EDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS-------------TQASIEIDSLFEGVDFYTSI 708 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-------------~~~~i~i~~~~~~~~~~~~i 708 (840)
.++++.|.+.|.+. +...... .-...++..|+.+... ........ +.++. .+.|
T Consensus 189 ~~lt~~L~~lL~~~-----~~~~~~~-----~~~~~v~~iKe~~c~v~~d~~~e~~~~~~~~~~~~y~-LPdg~--~i~l 255 (380)
T PTZ00466 189 RDITTYLGYLLRKN-----GHLFNTS-----AEMEVVKNMKENCCYVSFNMNKEKNSSEKALTTLPYI-LPDGS--QILI 255 (380)
T ss_pred hHHHHHHHHHHHhc-----CCCCCcH-----HHHHHHHHHHHhCeEecCChHHHHhhccccccceeEE-CCCCc--EEEE
Confidence 99988888776421 1111110 1112244455443210 00011111 22322 3556
Q ss_pred ehHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCC--ccCccEEEEEcCCCCcHHHHHHHHhHc----CC---Cccc
Q psy7262 709 TRARFE---ELNADLF-----RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF----NG---KELN 771 (840)
Q Consensus 709 tr~e~e---~~~~~~i-----~~i~~~i~~~l~~a~~~--~~~Id~V~LvGG~s~~p~v~~~l~~~f----~~---~~v~ 771 (840)
..+.|. -++.|.+ ..+.++|.+.+.++..+ ..-...|+|+||+|.+|.+.++|++.+ |. ..+.
T Consensus 256 ~~er~~~~E~LF~P~~~g~~~~gl~~~i~~sI~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~~~~v~v~ 335 (380)
T PTZ00466 256 GSERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYSHIVLSGGTTMFHGFGDRLLNEIRKFAPKDITIRIS 335 (380)
T ss_pred chHHhcCcccccCccccCCCCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCccccCCHHHHHHHHHHHhCCCCceEEEe
Confidence 666663 3555532 25667777777765433 223578999999999999999998877 21 1244
Q ss_pred CCCChhhHHHHHHHHHHH
Q psy7262 772 KSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 772 ~~~~p~~aVA~GAal~a~ 789 (840)
.+.++..++=.||+++|.
T Consensus 336 ~~~~r~~~aW~GgSilas 353 (380)
T PTZ00466 336 APPERKFSTFIGGSILAS 353 (380)
T ss_pred cCCCCceeEEECchhhcC
Confidence 455666777889988885
No 64
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=98.77 E-value=1.4e-07 Score=105.00 Aligned_cols=184 Identities=14% Similarity=0.187 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEeecchHHHHHHhh-cccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCcee
Q psy7262 495 DSQRQATKDSGTIAGLNVLRIINEPTAAAIAYG-LDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNV 573 (840)
Q Consensus 495 ~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~-~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~ 573 (840)
....+.+.++++.||++...+..+|.|.+-.+. +..... ....+..+++++|||++||+++++.-+.
T Consensus 142 ~~~v~~~~~~~~~aGl~~~~id~~~~Al~~~~~~~~~~~~-~~~~~~~~~~lvdiG~~~t~l~i~~~g~----------- 209 (348)
T TIGR01175 142 KEVVDSRLHALKLAGLEPKVVDVESFALLRAWRLLGEQLA-SRTYRLTDAALVDIGATSSTLNLLHPGR----------- 209 (348)
T ss_pred HHHHHHHHHHHHHcCCceEEEecHHHHHHHHHHHHHhhCc-cccccCceEEEEEECCCcEEEEEEECCe-----------
Confidence 456777899999999999999999999876553 111100 0011222489999999999999885321
Q ss_pred EEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHH
Q psy7262 574 LIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 653 (840)
Q Consensus 574 ~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 653 (840)
+.+ .....+||.++++.+.+.+.
T Consensus 210 ---------------------------------~~~------------------------~r~i~~G~~~i~~~i~~~~~ 232 (348)
T TIGR01175 210 ---------------------------------MLF------------------------TREVPFGTRQLTSELSRAYG 232 (348)
T ss_pred ---------------------------------EEE------------------------EEEeechHHHHHHHHHHHcC
Confidence 110 11256899999988865441
Q ss_pred HHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHH
Q psy7262 654 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLR 733 (840)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~ 733 (840)
. -...||+.|........ .-.+++++.++++...|.+.++
T Consensus 233 --------~-----------~~~~Ae~~k~~~~~~~~---------------------~~~~~~~~~~~~l~~eI~~~l~ 272 (348)
T TIGR01175 233 --------L-----------NPEEAGEAKQQGGLPLL---------------------YDPEVLRRFKGELVDEIRRSLQ 272 (348)
T ss_pred --------C-----------CHHHHHHHHhcCCCCCc---------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 1 12456777764321100 0123455556666666666654
Q ss_pred Hc--CCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCccc-------------------CCCChhhHHHHHHHHHH
Q psy7262 734 DA--KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN-------------------KSINPDEAVAYGAAVQA 788 (840)
Q Consensus 734 ~a--~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~-------------------~~~~p~~aVA~GAal~a 788 (840)
-. ......++.|+|+||+++++.+.+.+++.+ +.++. ....|..++|.|+|+++
T Consensus 273 ~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l-~~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~a~Glalr~ 347 (348)
T TIGR01175 273 FFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRL-GLPTEVANPFALMALDAKVDAGRLAVDAPALMTALGLALRG 347 (348)
T ss_pred hhcCCCCCcccceEEEECccccchhHHHHHHHHH-CCCeEecChHHhcccCccCCHHHHHhhhHHHHHHhhHhhcC
Confidence 32 222346899999999999999999999998 33221 11356778889988764
No 65
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=98.58 E-value=5.2e-07 Score=100.00 Aligned_cols=190 Identities=20% Similarity=0.284 Sum_probs=108.8
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCc
Q psy7262 485 AVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGI 564 (840)
Q Consensus 485 vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~ 564 (840)
.++++|- ..-+...++++.||++...+=-+|.|.+-.+...... .......+.++++|||+.+|.++++.-+
T Consensus 129 ll~Aa~k----~~v~~~~~~~~~aGL~~~~vDv~~~Al~r~~~~~~~~-~~~~~~~~~~~lvdiG~~~t~~~i~~~g--- 200 (340)
T PF11104_consen 129 LLVAAPK----EIVESYVELFEEAGLKPVAVDVEAFALARLFEFLEPQ-LPDEEDAETVALVDIGASSTTVIIFQNG--- 200 (340)
T ss_dssp EEEEEEH----HHHHHHHHHHHHTT-EEEEEEEHHHHGGGGGHHHHHT-ST----T-EEEEEEE-SS-EEEEEEETT---
T ss_pred EEEEEcH----HHHHHHHHHHHHcCCceEEEeehHHHHHHHHHHHHHh-CCcccccceEEEEEecCCeEEEEEEECC---
Confidence 4444543 5666788899999999887766777655444331110 1111234578999999999998887522
Q ss_pred ccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhh
Q psy7262 565 FEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 644 (840)
Q Consensus 565 ~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~ 644 (840)
.++| .....+||..+
T Consensus 201 -----------------------------------------~~~f------------------------~R~i~~G~~~l 215 (340)
T PF11104_consen 201 -----------------------------------------KPIF------------------------SRSIPIGGNDL 215 (340)
T ss_dssp -----------------------------------------EEEE------------------------EEEES-SHHHH
T ss_pred -----------------------------------------EEEE------------------------EEEEeeCHHHH
Confidence 1111 11257899999
Q ss_pred hhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHH
Q psy7262 645 DNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGT 724 (840)
Q Consensus 645 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i 724 (840)
++++++.+--.+ ..+|..|..-+-.. +...+.+.+.++++
T Consensus 216 ~~~i~~~~~i~~-------------------~~Ae~~k~~~~l~~---------------------~~~~~~l~~~~~~l 255 (340)
T PF11104_consen 216 TEAIARELGIDF-------------------EEAEELKRSGGLPE---------------------EYDQDALRPFLEEL 255 (340)
T ss_dssp HHHHHHHTT--H-------------------HHHHHHHHHT---------------------------HHHHHHHHHHHH
T ss_pred HHHHHHhcCCCH-------------------HHHHHHHhcCCCCc---------------------chHHHHHHHHHHHH
Confidence 999987753222 24555555421100 22234455555555
Q ss_pred HHHHHHHHH--HcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcc---------cCCC----------ChhhHHHHH
Q psy7262 725 MEPVEKSLR--DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL---------NKSI----------NPDEAVAYG 783 (840)
Q Consensus 725 ~~~i~~~l~--~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v---------~~~~----------~p~~aVA~G 783 (840)
..-|.+.++ ........|+.|+|+||+++++.|.+.|++.+ +.++ ..+. .|..+||.|
T Consensus 256 ~~EI~rsl~~y~~~~~~~~i~~I~L~Ggga~l~gL~~~l~~~l-~~~v~~~~p~~~~~~~~~~~~~~~~~~~~~~avA~G 334 (340)
T PF11104_consen 256 AREIRRSLDFYQSQSGGESIERIYLSGGGARLPGLAEYLSEEL-GIPVEVINPFKNIKLDPKINSEYLQEDAPQFAVALG 334 (340)
T ss_dssp HHHHHHHHHHHHHH------SEEEEESGGGGSTTHHHHHHHHH-TSEEEE--GGGGSB--TTS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCEEEEECCccchhhHHHHHHHHH-CCceEEcChHHhCccCcccChhhhhhhhhHHHHHHH
Confidence 555555555 22233457999999999999999999999999 4322 1111 366799999
Q ss_pred HHHHH
Q psy7262 784 AAVQA 788 (840)
Q Consensus 784 Aal~a 788 (840)
+|++.
T Consensus 335 LAlR~ 339 (340)
T PF11104_consen 335 LALRG 339 (340)
T ss_dssp HHHHH
T ss_pred HhhcC
Confidence 99874
No 66
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=98.54 E-value=3.9e-05 Score=92.09 Aligned_cols=85 Identities=16% Similarity=0.219 Sum_probs=64.1
Q ss_pred eeEEEEehHHHHHHHH---HHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCC-----------
Q psy7262 703 DFYTSITRARFEELNA---DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK----------- 768 (840)
Q Consensus 703 ~~~~~itr~e~e~~~~---~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~----------- 768 (840)
+..+.|+..++...+- -.|.+....+-+++..- +.|.++|+|=-|++|.|+..+.+..|=.
T Consensus 730 dv~l~i~~~~l~~~~~~~r~~i~~~L~~LcEvv~~Y-----~CDVLLLTGRPSrlPgvqalfr~~~pvPp~RIv~l~~Y~ 804 (1002)
T PF07520_consen 730 DVPLEIDLEKLHAAFLSDRMVICKTLRALCEVVHHY-----DCDVLLLTGRPSRLPGVQALFRHLLPVPPDRIVPLHGYR 804 (1002)
T ss_pred cceEEEcHHHHHHHHHhCcccHHHHHHHHHHHHHHh-----CCCEEEEcCCccccHHHHHHHHHhCCCCcccEEecCCee
Confidence 4568899999988774 56666666666666653 4678999999999999999999997411
Q ss_pred --------cccCCCChhhHHHHHHHHHHHHHc
Q psy7262 769 --------ELNKSINPDEAVAYGAAVQAAILH 792 (840)
Q Consensus 769 --------~v~~~~~p~~aVA~GAal~a~~l~ 792 (840)
+-.+..||-+.||.||.+-+....
T Consensus 805 tg~WYPF~~~~rI~dPKTTaaVGAmLc~La~~ 836 (1002)
T PF07520_consen 805 TGNWYPFNDQGRIDDPKTTAAVGAMLCLLAEG 836 (1002)
T ss_pred ecccccCCCCCcCCCchHHHHHHHHHHHHhcc
Confidence 112455999999999987775444
No 67
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit. Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.
Probab=98.18 E-value=0.00012 Score=77.63 Aligned_cols=47 Identities=26% Similarity=0.356 Sum_probs=41.5
Q ss_pred cEEEEEcCCCCcHHHHHHHHhHcCCCccc-CCCChhhHHHHHHHHHHHH
Q psy7262 743 HDIVLVGGSTRIPKVQKLLQDFFNGKELN-KSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 743 d~V~LvGG~s~~p~v~~~l~~~f~~~~v~-~~~~p~~aVA~GAal~a~~ 790 (840)
..|+|+||.++.|.+++.+++.+ +.++. .+.+|+.+-|.|||++|..
T Consensus 241 ~~v~~~GGva~N~~l~~al~~~L-g~~v~~~p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 241 EGFFITGGIAKNPGVVKRIERIL-GIKAVDTKIDSQIAGALGAALFGYT 288 (293)
T ss_pred CCEEEECcccccHHHHHHHHHHh-CCCceeCCCCccHHHHHHHHHHHHH
Confidence 35899999999999999999999 66665 5778999999999999954
No 68
>KOG0679|consensus
Probab=98.14 E-value=0.00016 Score=77.29 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHh
Q psy7262 448 EVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAY 526 (840)
Q Consensus 448 ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y 526 (840)
+++.+.++|.++.- +.... ...-++||-|++=+.+.|+.+.+.+ +...++...++.+|.++|++.
T Consensus 86 D~~~~~w~~~~~~~---Lk~~p-----------~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~ 151 (426)
T KOG0679|consen 86 DLFEMQWRYAYKNQ---LKVNP-----------EEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFAN 151 (426)
T ss_pred HHHHHHHHHHHhhh---hhcCc-----------cccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhc
Confidence 67777777776432 21111 2257899999988788887766554 667888889999999998866
Q ss_pred hcccccCCCCCCCCceEEEEecCCCceEEEEE
Q psy7262 527 GLDKKVGSTAGSGERNVLIFDLGGGTFDVSIL 558 (840)
Q Consensus 527 ~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~ 558 (840)
...+.||||||++++.++-+
T Consensus 152 ------------GrstalVvDiGa~~~svsPV 171 (426)
T KOG0679|consen 152 ------------GRSTALVVDIGATHTSVSPV 171 (426)
T ss_pred ------------CCCceEEEEecCCCceeeee
Confidence 34567999999999877655
No 69
>COG5277 Actin and related proteins [Cytoskeleton]
Probab=98.05 E-value=0.00012 Score=83.12 Aligned_cols=67 Identities=16% Similarity=0.168 Sum_probs=52.7
Q ss_pred ceEEEeeCCCCCHHHHHHHHHH-HHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEe
Q psy7262 483 SNAVITVPAYFNDSQRQATKDS-GTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~A-a~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~ 559 (840)
..+++|-|..+....|+.+.+. .+...+..+.+..++.+++++.+.. ..+.+|+|+|.+.|+++-+-
T Consensus 107 ~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~----------~~~g~ViD~G~~~t~v~PV~ 174 (444)
T COG5277 107 HPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSS----------DETGLVIDSGDSVTHVIPVV 174 (444)
T ss_pred CceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCC----------CCceEEEEcCCCceeeEeee
Confidence 5899999999999888876654 4667788888888888887765322 14779999999999987664
No 70
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative. This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.
Probab=97.97 E-value=8.6e-05 Score=78.53 Aligned_cols=67 Identities=28% Similarity=0.407 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccCcc-EEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHH
Q psy7262 714 EELNADLFRGTMEPVEKSLRDAKMDKAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 786 (840)
Q Consensus 714 e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id-~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal 786 (840)
+++++.+++.+...+.+.+.... ++ .|+|+||.+++|++.+.+++.+ +.++..+.+|..+.|.|||+
T Consensus 180 ~di~~~~~~~va~~i~~~~~~~~-----~~~~Vvl~GGva~n~~l~~~l~~~l-g~~v~~~~~~~~~~AlGaAl 247 (248)
T TIGR00241 180 EDILAGVYESIAERVAEMLQRLK-----IEAPIVFTGGVSKNKGLVKALEKKL-GMKVITPPEPQIVGAVGAAL 247 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC-----CCCCEEEECccccCHHHHHHHHHHh-CCcEEcCCCccHHHHHHHHh
Confidence 34555666666666666554432 44 7999999999999999999999 78888899999999999996
No 71
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]
Probab=97.79 E-value=0.0096 Score=67.82 Aligned_cols=66 Identities=9% Similarity=0.198 Sum_probs=46.0
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhc-cCCccceEEEeeCCCCCHHHHHHHHHHHHHc
Q psy7262 443 TFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAY-LGKTVSNAVITVPAYFNDSQRQATKDSGTIA 508 (840)
Q Consensus 443 ~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~vVitVPa~~~~~~r~~l~~Aa~~A 508 (840)
.++-..+.+.+|..+..+|..+++...++.-..-. ..+....+.+|+|.-....+|+.+|+-+..|
T Consensus 423 ~ySRSslmTfML~EilaqAl~qiNsp~tR~kl~~~~aPR~LRsiILTlPsAmPk~EreIfr~r~~eA 489 (1014)
T COG4457 423 CYSRSSLMTFMLSEILAQALSQINSPATRLKLRHKDAPRQLRSIILTLPSAMPKQEREIFRQRMEEA 489 (1014)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhcCHHHhhhhccCCchHhhhhheeeCCccCCchHHHHHHHHHHHH
Confidence 45667888999999998888877654433322111 1123368999999999988888877776665
No 72
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=97.70 E-value=0.00018 Score=80.37 Aligned_cols=82 Identities=20% Similarity=0.293 Sum_probs=54.2
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHHHH------------cCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCC
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSGTI------------AGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGG 550 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa~~------------AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGG 550 (840)
.-.+||.+... ++.++++++. ||++.-.++. |.|++.+...+ .++..++++||||
T Consensus 89 ~ahIITg~~~~----~~Nl~~~v~~~~~~~gdfVVA~AG~~le~iva-~~ASg~avLse--------Eke~gVa~IDIGg 155 (475)
T PRK10719 89 GAVIITGETAR----KENAREVVMALSGSAGDFVVATAGPDLESIIA-GKGAGAQTLSE--------ERNTRVLNIDIGG 155 (475)
T ss_pred cEEEEEechhH----HHHHHHHHHHhcccccceeeeccCccHHHhhh-HHHhhHHHhhh--------hccCceEEEEeCC
Confidence 46677777644 4556666665 5555444444 88888866532 2678899999999
Q ss_pred CceEEEEEeeccCcccCCCCceeEEEecCCCccc
Q psy7262 551 GTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFD 584 (840)
Q Consensus 551 GTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d 584 (840)
|||++++++-+. ..+.-.+++||..+.
T Consensus 156 GTT~iaVf~~G~-------l~~T~~l~vGG~~IT 182 (475)
T PRK10719 156 GTANYALFDAGK-------VIDTACLNVGGRLIE 182 (475)
T ss_pred CceEEEEEECCE-------EEEEEEEecccceEE
Confidence 999999997542 122334567776443
No 73
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]. This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.
Probab=97.59 E-value=0.0012 Score=68.12 Aligned_cols=50 Identities=26% Similarity=0.322 Sum_probs=37.8
Q ss_pred ccCccEEEEEcCCCCcHHHHHHHHhHcCCC-------cccCCCChhhHHHHHHHHHH
Q psy7262 739 KAQIHDIVLVGGSTRIPKVQKLLQDFFNGK-------ELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 739 ~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~-------~v~~~~~p~~aVA~GAal~a 788 (840)
..+|+.|+||||++.-.-|-++|.+.+..- .|.-..-|..|||.|+++.-
T Consensus 273 iR~i~fVVlVGGSALDFEIp~~vtdaLs~y~iVaGRgNIrG~eGPRNAVATGLvlsy 329 (332)
T PF08841_consen 273 IRDIPFVVLVGGSALDFEIPQMVTDALSHYGIVAGRGNIRGVEGPRNAVATGLVLSY 329 (332)
T ss_dssp CCC--EEEEESGGGGSSSHHHHHHHHHCTTT-EEEE--GGGTSTTSTHHHHHHHHHH
T ss_pred cccCceEEEecCchhhhhhHHHHHHHHhhCcceeeccccccccCchHHHHHHHHHhh
Confidence 357999999999999888888888887432 45556679999999999653
No 74
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=97.53 E-value=0.0064 Score=64.51 Aligned_cols=161 Identities=16% Similarity=0.234 Sum_probs=93.6
Q ss_pred HHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEe
Q psy7262 498 RQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFD 577 (840)
Q Consensus 498 r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d 577 (840)
.....+|+++|||+...+=-|..|.--.|..... ..........|+|+|||+-.|-+.++.-+.
T Consensus 151 v~~ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~-~~~~~~a~~~vav~~Igat~s~l~vi~~gk--------------- 214 (354)
T COG4972 151 VESRIDAFELAGLEPKVLDVESFALLRAYRLLAS-QFGPEEAAMKVAVFDIGATSSELLVIQDGK--------------- 214 (354)
T ss_pred hHHHHHHHHHcCCCceEEehHHHHHHHHHHHHHH-HhCCchhhhhheeeeecccceEEEEEECCe---------------
Confidence 4446789999999887776677777555541111 011111122368899999888887764220
Q ss_pred cCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhHHHHHHHHHHH
Q psy7262 578 LGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFK 657 (840)
Q Consensus 578 ~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~ 657 (840)
. .| .....+||+.+..++.+.+--.+
T Consensus 215 -----------------------------~-------------------ly-----~r~~~~g~~Qlt~~i~r~~~L~~- 240 (354)
T COG4972 215 -----------------------------I-------------------LY-----TREVPVGTDQLTQEIQRAYSLTE- 240 (354)
T ss_pred -----------------------------e-------------------ee-----EeeccCcHHHHHHHHHHHhCCCh-
Confidence 0 01 12367899998888765542111
Q ss_pred HhccCCccccHHHHHHHHHHHHHHHHHcCCCCeeEEEEecccCCeeeEEEEehHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy7262 658 RKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKM 737 (840)
Q Consensus 658 ~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~~a~~ 737 (840)
..++.+|....... +. .-+-+...+..++++|.+.|+-.+..++
T Consensus 241 ------------------~~a~~~k~~~~~P~-----------~y------~~~vl~~f~~~l~~ei~Rslqfy~~~s~- 284 (354)
T COG4972 241 ------------------EKAEEIKRGGTLPT-----------DY------GSEVLRPFLGELTQEIRRSLQFYLSQSE- 284 (354)
T ss_pred ------------------hHhHHHHhCCCCCC-----------ch------hHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 13455554433211 00 0122223333444444444444444443
Q ss_pred CccCccEEEEEcCCCCcHHHHHHHHhHc
Q psy7262 738 DKAQIHDIVLVGGSTRIPKVQKLLQDFF 765 (840)
Q Consensus 738 ~~~~Id~V~LvGG~s~~p~v~~~l~~~f 765 (840)
..+|+.++|.||++.+-.|.+.|.+.+
T Consensus 285 -~~~id~i~LaGggA~l~gL~~~i~qrl 311 (354)
T COG4972 285 -MVDIDQILLAGGGASLEGLAAAIQQRL 311 (354)
T ss_pred -cceeeEEEEecCCcchhhHHHHHHHHh
Confidence 347999999999999999999999998
No 75
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
Probab=97.08 E-value=0.0092 Score=64.56 Aligned_cols=45 Identities=31% Similarity=0.338 Sum_probs=43.0
Q ss_pred EEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHH
Q psy7262 745 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 745 V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
|+|+||.+....+.+++++.+ +.+|..|.+|+..-|.|||++|..
T Consensus 346 iv~~GGva~n~av~~ale~~l-g~~V~vP~~~ql~GAiGAAL~a~~ 390 (396)
T COG1924 346 IVLQGGVALNKAVVRALEDLL-GRKVIVPPYAQLMGAIGAALIAKE 390 (396)
T ss_pred EEEECcchhhHHHHHHHHHHh-CCeeecCCccchhhHHHHHHHHhh
Confidence 999999999999999999999 789999999999999999999964
No 76
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D. This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.
Probab=97.03 E-value=0.01 Score=62.32 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCc----ccCCCChhhHHHHHHHHHH
Q psy7262 719 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE----LNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 719 ~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~----v~~~~~p~~aVA~GAal~a 788 (840)
.+...+.+.+...+++.+.. -+.|+|+||.++.+.+.+.+++.+++.+ +..+.+|+.+-|.|||++|
T Consensus 192 Gl~~sia~r~~~~~~~~~~~---~~~v~~~GGva~n~~~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~ 262 (262)
T TIGR02261 192 GIHESMADRLAKLLKSLGAL---DGTVLCTGGLALDAGLLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG 262 (262)
T ss_pred HHHHHHHHHHHHHHhccCCC---CCcEEEECcccccHHHHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence 34444444444444443211 1359999999999999999999885433 5556789999999999874
No 77
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=96.91 E-value=0.004 Score=68.86 Aligned_cols=46 Identities=33% Similarity=0.413 Sum_probs=42.8
Q ss_pred cEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHH
Q psy7262 743 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 743 d~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~ 789 (840)
+.|+++||.++.+.+.+.+++.+ +.++..+.+|+.+-|.|||++|.
T Consensus 357 ~~VvftGGva~N~gvv~ale~~L-g~~iivPe~pq~~GAiGAAL~A~ 402 (404)
T TIGR03286 357 EPVILVGGTSLIEGLVKALGDLL-GIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred CcEEEECChhhhHHHHHHHHHHh-CCcEEECCcccHHHHHHHHHHhc
Confidence 35999999999999999999999 77888899999999999999985
No 78
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A. This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).
Probab=96.88 E-value=0.013 Score=64.22 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=41.2
Q ss_pred cEEEEEcCCCCcHHHHHHHHhHcC----CCcccCCCChhhHHHHHHHHHH
Q psy7262 743 HDIVLVGGSTRIPKVQKLLQDFFN----GKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 743 d~V~LvGG~s~~p~v~~~l~~~f~----~~~v~~~~~p~~aVA~GAal~a 788 (840)
..|+|+||.++.+.+.+.+++.+. +.++..+.+|+.+-|.|||++|
T Consensus 383 ~~VvftGGvA~N~gvv~aLe~~L~~~~~~~~V~Vp~~pq~~GALGAAL~a 432 (432)
T TIGR02259 383 DQFTFTGGVAKNEAAVKELRKLIKENYGEVQINIDPDSIYTGALGASEFA 432 (432)
T ss_pred CCEEEECCccccHHHHHHHHHHHccccCCCeEecCCCccHHHHHHHHHhC
Confidence 469999999999999999999984 4668889999999999999875
No 79
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3.5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.
Probab=96.60 E-value=0.0029 Score=68.40 Aligned_cols=69 Identities=17% Similarity=0.138 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHH
Q psy7262 715 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 786 (840)
Q Consensus 715 ~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal 786 (840)
.+++-..+.+.+.|++.....+..+.+. .++.+||.+ |++...+.+.++-..+..+..|.-+-|.||++
T Consensus 215 ~i~~~~~~~m~~~i~~~~~~~g~~~~~~-~lv~~GG~g--~~~~~~la~~lg~~~v~~p~~~~v~~A~Ga~~ 283 (290)
T PF01968_consen 215 GIVRIANENMADAIREVSVERGYDPRDF-PLVAFGGAG--PLHAPELAEELGIPRVVPPHYAGVANAIGAAV 283 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--EEEE--------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcccc-ccccccccc--cccccccccccccccccccccccccccccccc
Confidence 3444455566666666655556555432 244556655 78888888888555677776778889999984
No 80
>KOG0676|consensus
Probab=96.60 E-value=0.014 Score=64.35 Aligned_cols=50 Identities=22% Similarity=0.283 Sum_probs=33.8
Q ss_pred cCccEEEEEcCCCCcHHHHHHHHhHc----CC-C--cccCCCChhhHHHHHHHHHHH
Q psy7262 740 AQIHDIVLVGGSTRIPKVQKLLQDFF----NG-K--ELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 740 ~~Id~V~LvGG~s~~p~v~~~l~~~f----~~-~--~v~~~~~p~~aVA~GAal~a~ 789 (840)
.-...|+|+||++..|.+.+++.+.+ |+ . ++..+.+...+|=.|+.+.|+
T Consensus 289 ~L~~nivLsGGtT~~pGl~~Rl~kEl~~l~P~~~~ikv~~pp~r~~s~WlGgSIlas 345 (372)
T KOG0676|consen 289 DLYENIVLSGGTTMFPGLADRLQKELQALAPSTIKIKVIAPPERKYSAWLGGSILAS 345 (372)
T ss_pred HHHhheEEeCCcccchhHHHHHHHHHhhcCCCCcceEEecCcccccceecCceeEee
Confidence 34578999999999999999998876 21 1 234443333556667666663
No 81
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....
Probab=96.29 E-value=0.0065 Score=61.68 Aligned_cols=76 Identities=25% Similarity=0.367 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC-ccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHH
Q psy7262 713 FEELNADLFRGTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 713 ~e~~~~~~i~~i~~~i~~~l~~a~~~-~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
..+++..+++.+.-.++..++..... ...++.|+++||.++++.+.+.+.+.+ +.+|....+ .++.|.|||+.|+.
T Consensus 120 ~~~~~rAv~Egia~~~~~~~~~l~~~~~~~~~~i~~~GG~~~n~~~~q~~Advl-~~~V~~~~~-~e~~a~GaA~~A~~ 196 (198)
T PF02782_consen 120 RADLARAVLEGIAFSLRQILEELEELTGIPIRRIRVSGGGAKNPLWMQILADVL-GRPVVRPEV-EEASALGAALLAAV 196 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCESEEEEESGGGGSHHHHHHHHHHH-TSEEEEESS-STHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHhhhhccccccccceeeEeccccccChHHHHHHHHHh-CCceEeCCC-CchHHHHHHHHHHh
Confidence 34455555555555555554444211 234789999999999999999999999 777766644 88999999999864
No 82
>KOG0797|consensus
Probab=95.65 E-value=0.099 Score=58.41 Aligned_cols=125 Identities=15% Similarity=0.157 Sum_probs=85.2
Q ss_pred eeeCHHHHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCCHHHHHH-HHHHHHHcCCcEEEeecchH
Q psy7262 442 KTFFPEEVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFNDSQRQA-TKDSGTIAGLNVLRIINEPT 520 (840)
Q Consensus 442 ~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~~~~r~~-l~~Aa~~AG~~~v~~v~Ep~ 520 (840)
...+..++++++-+-+.-...+.+..+.... ..-++|+-||-.|.....+. ++-.....||..+.++-|..
T Consensus 195 ~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl--------~qy~aVlVVpD~f~r~hveefl~ilL~eL~F~~~~v~QESl 266 (618)
T KOG0797|consen 195 PYYSLQRLCEDLTAILDYALLEKLHIPHKKL--------FQYHAVLVVPDTFDRRHVEEFLTILLGELGFNSAVVHQESL 266 (618)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhcCCChhHh--------cceeEEEEecchhhHHHHHHHHHHHHHHhccceEEEEhhhh
Confidence 4456667777654433322333443333111 12689999999999776544 55566778999999999999
Q ss_pred HHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceeeee
Q psy7262 521 AAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILTIE 591 (840)
Q Consensus 521 AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~ 591 (840)
||.+..++. ..-|||||+-+|-|++++-+ +.. .+.-+.++.||.++++..+.+.
T Consensus 267 aatfGaGls------------s~CVVdiGAQkTsIaCVEdG--vs~---~ntri~L~YGGdDitr~f~~ll 320 (618)
T KOG0797|consen 267 AATFGAGLS------------SACVVDIGAQKTSIACVEDG--VSL---PNTRIILPYGGDDITRCFLWLL 320 (618)
T ss_pred HHHhcCCcc------------ceeEEEccCcceeEEEeecC--ccc---cCceEEeccCCchHHHHHHHHH
Confidence 998766543 24799999999999998754 211 2335678999999998766543
No 83
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase. This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.
Probab=95.38 E-value=0.05 Score=64.37 Aligned_cols=83 Identities=19% Similarity=0.180 Sum_probs=62.7
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHH
Q psy7262 709 TRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 709 tr~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a 788 (840)
+|..+..++..+++.+.=.++..++........++.|.++||.++++...+.+.+.+ +.+|....++ ++.++|||++|
T Consensus 411 ~~~~~~~~~rAvlEgiaf~~r~~~e~l~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~~~-e~~alGaA~lA 488 (541)
T TIGR01315 411 SKDGLALLYYATMEFIAYGTRQIVEAMNTAGHTIKSIFMSGGQCQNPLLMQLIADAC-DMPVLIPYVN-EAVLHGAAMLG 488 (541)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEecCcccCHHHHHHHHHHH-CCeeEecChh-HHHHHHHHHHH
Confidence 466667777777777765555555544322235788999999999999999999999 8888777555 47799999999
Q ss_pred HHHcC
Q psy7262 789 AILHG 793 (840)
Q Consensus 789 ~~l~~ 793 (840)
+.-.|
T Consensus 489 ~~~~G 493 (541)
T TIGR01315 489 AKAAG 493 (541)
T ss_pred HHhcC
Confidence 76555
No 84
>PLN02669 xylulokinase
Probab=95.24 E-value=0.054 Score=64.14 Aligned_cols=72 Identities=21% Similarity=0.346 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHH
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
+++.+++.+.=.++..++..+.. ..++.|+++||+|+++.+.+.+.+.| +.+|.....+ ++.|+|||+.|+.
T Consensus 421 ~~RAvlEg~a~~~r~~~~~l~~~-~~~~~i~~~GGgs~s~~w~Qi~ADVl-g~pV~~~~~~-ea~alGAA~~A~~ 492 (556)
T PLN02669 421 EVRAIIEGQFLSMRAHAERFGMP-VPPKRIIATGGASANQSILKLIASIF-GCDVYTVQRP-DSASLGAALRAAH 492 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEcChhcCHHHHHHHHHHc-CCCeEecCCC-CchHHHHHHHHHH
Confidence 34445555554444444444332 45789999999999999999999999 7778766555 6789999999975
No 85
>PRK15027 xylulokinase; Provisional
Probab=95.22 E-value=0.046 Score=63.79 Aligned_cols=52 Identities=29% Similarity=0.408 Sum_probs=45.3
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|+++||+++++...+.+.+.+ +.+|....+.+++.+.|||++|+.-.|
T Consensus 386 ~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~~~~~~~a~GaA~lA~~~~G 437 (484)
T PRK15027 386 KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_pred CccEEEEeCcccCCHHHHHHHHHHh-CCeEEeecCCCcchHHHHHHHHHHhcC
Confidence 4788999999999999999999999 888866656777889999999987665
No 86
>KOG0680|consensus
Probab=95.08 E-value=0.66 Score=49.30 Aligned_cols=39 Identities=18% Similarity=0.336 Sum_probs=28.9
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHc----CC---CcccCCCChhhH
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFF----NG---KELNKSINPDEA 779 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f----~~---~~v~~~~~p~~a 779 (840)
-+..|+++||.|..|..+++|+..+ |. ..+..+.||..-
T Consensus 317 l~~NIv~iGGn~~fPgF~~RL~~Elr~l~P~d~~v~V~~p~dp~~~ 362 (400)
T KOG0680|consen 317 LLENIVCIGGNSNFPGFRQRLARELRSLLPADWEVSVSVPEDPITF 362 (400)
T ss_pred HHhcEEEecCccCCcchHHHHHHHHHhhCCccceEEEecCCCccee
Confidence 3567999999999999999998876 21 245566666543
No 87
>PRK13317 pantothenate kinase; Provisional
Probab=94.66 E-value=0.062 Score=57.53 Aligned_cols=49 Identities=24% Similarity=0.262 Sum_probs=42.9
Q ss_pred CccEEEEEc-CCCCcHHHHHHHHhHcC--CCcccCCCChhhHHHHHHHHHHH
Q psy7262 741 QIHDIVLVG-GSTRIPKVQKLLQDFFN--GKELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 741 ~Id~V~LvG-G~s~~p~v~~~l~~~f~--~~~v~~~~~p~~aVA~GAal~a~ 789 (840)
.+..|+++| |.+..|.+++.+.+.+. +.++..+.+|..+.|.|||+++.
T Consensus 222 ~~~~Ivf~G~gla~n~~l~~~l~~~l~~~~~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 222 NIENIVYIGSTLTNNPLLQEIIESYTKLRNCTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CCCeEEEECcccccCHHHHHHHHHHHhcCCceEEecCCCchhHHHHHHHHhh
Confidence 356899999 79999999999998873 56788899999999999999875
No 88
>PRK00047 glpK glycerol kinase; Provisional
Probab=94.34 E-value=0.11 Score=61.04 Aligned_cols=77 Identities=16% Similarity=0.245 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 715 ELNADLFRGTMEPVEKSLRDAK-MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 715 ~~~~~~i~~i~~~i~~~l~~a~-~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
.++..+++.+.-.++..++... .....++.|.++||+++++...+.+.+.+ +.+|.... ..++.|+|||+.|+.-.|
T Consensus 376 ~l~rAvlEgia~~~r~~~e~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~-~~e~~a~GaA~~A~~~~G 453 (498)
T PRK00047 376 HIIRATLESIAYQTRDVLDAMQADSGIRLKELRVDGGAVANNFLMQFQADIL-GVPVERPV-VAETTALGAAYLAGLAVG 453 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecCcccCHHHHHHHHHhh-CCeeEecC-cccchHHHHHHHHhhhcC
Confidence 3444455555444444433332 11224788999999999999999999999 78886654 446889999999976555
No 89
>COG1069 AraB Ribulose kinase [Energy production and conversion]
Probab=94.31 E-value=0.5 Score=53.92 Aligned_cols=83 Identities=24% Similarity=0.356 Sum_probs=61.1
Q ss_pred EEEehHHHHHHHHHHHHHHH---HHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHH
Q psy7262 706 TSITRARFEELNADLFRGTM---EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAY 782 (840)
Q Consensus 706 ~~itr~e~e~~~~~~i~~i~---~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~ 782 (840)
+.-+.+.+-.+....++.+. +.|-+++++.+ -.|+.|+..||-.+.|.+.+.+.+.. +.++..+ ..+++++.
T Consensus 396 L~T~~~~l~~lY~a~l~a~A~GtR~Iie~~~~~g---~~Id~l~~sGG~~KN~llmql~aDvt-g~~v~i~-~s~~a~ll 470 (544)
T COG1069 396 LDTSPESLALLYRALLEATAFGTRAIIETFEDQG---IAIDTLFASGGIRKNPLLMQLYADVT-GRPVVIP-ASDQAVLL 470 (544)
T ss_pred cCCCcHHHHHHHHHHHHHHHHhHHHHHHHHHHcC---CeeeEEEecCCcccCHHHHHHHHHhc-CCeEEee-cccchhhh
Confidence 34445555566655555553 44555566655 45899999999999999999999998 6666666 67789999
Q ss_pred HHHHHHHHHcC
Q psy7262 783 GAAVQAAILHG 793 (840)
Q Consensus 783 GAal~a~~l~~ 793 (840)
|+|+.++--.+
T Consensus 471 GsAm~~avAag 481 (544)
T COG1069 471 GAAMFAAVAAG 481 (544)
T ss_pred HHHHHHHHHhc
Confidence 99999875554
No 90
>PRK04123 ribulokinase; Provisional
Probab=94.21 E-value=0.11 Score=61.77 Aligned_cols=76 Identities=18% Similarity=0.315 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCC-CCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~-s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
++..+++.+.-.+...++........++.|.++||+ ++++.+.+.+.+.+ +.+|.... +.++.|.|||++|+.-.|
T Consensus 413 l~RAvlEgia~~~~~~~e~l~~~g~~~~~i~~~GGg~s~s~~w~Qi~ADv~-g~pV~~~~-~~e~~alGaA~lA~~~~G 489 (548)
T PRK04123 413 IYRALIEATAFGTRAIMECFEDQGVPVEEVIAAGGIARKNPVLMQIYADVL-NRPIQVVA-SDQCPALGAAIFAAVAAG 489 (548)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCcccCHHHHHHHHHhc-CCceEecC-ccccchHHHHHHHHHHhc
Confidence 344444444433333333222122347889999999 99999999999999 77776554 456889999999986554
No 91
>PTZ00294 glycerol kinase-like protein; Provisional
Probab=94.18 E-value=0.13 Score=60.41 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~-~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
++..+++.+.-.++..++.... ....++.|.++||.++++.+.+.+.+.+ +.+|..... .++.|.|||+.|+.-.|
T Consensus 380 i~rAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GG~a~s~~w~Qi~Adv~-g~pV~~~~~-~e~~alGaAl~aa~a~G 456 (504)
T PTZ00294 380 IVRAALEAIALQTNDVIESMEKDAGIELNSLRVDGGLTKNKLLMQFQADIL-GKDIVVPEM-AETTALGAALLAGLAVG 456 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCcceEEEecccccCHHHHHHHHHHh-CCceEecCc-ccchHHHHHHHHHhhcC
Confidence 4444455554444444433221 1224788999999999999999999999 878876654 44789999999986655
No 92
>TIGR02628 fuculo_kin_coli L-fuculokinase. Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.
Probab=94.16 E-value=0.11 Score=60.25 Aligned_cols=75 Identities=15% Similarity=0.241 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHH---HHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHH
Q psy7262 715 ELNADLFRGTMEPVEK---SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 791 (840)
Q Consensus 715 ~~~~~~i~~i~~~i~~---~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l 791 (840)
.++..+++.+.-.++. .+++.+ ...++.|.++||++++|...+.+.+.+ +.+|....++ ++.++|||+.|+.-
T Consensus 366 ~l~rAvlEgia~~~r~~~e~l~~~~--~~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pV~~~~~~-e~~~lGaA~~a~~a 441 (465)
T TIGR02628 366 HIYRAALEGLTAQLKRNLQMLEQIG--QFKASELLLVGGGSKNTLWNQIRANML-DIPVKVVDDA-ETTVAGAAMFGFYG 441 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCcceEEEecCccCCHHHHHHhhhhc-CCeeEeccCC-cchHHHHHHHHHHh
Confidence 3444455554444443 344432 224788999999999999999999999 7888766554 57799999999865
Q ss_pred cC
Q psy7262 792 HG 793 (840)
Q Consensus 792 ~~ 793 (840)
.|
T Consensus 442 ~G 443 (465)
T TIGR02628 442 VG 443 (465)
T ss_pred cC
Confidence 54
No 93
>TIGR01234 L-ribulokinase L-ribulokinase. This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.
Probab=94.11 E-value=0.13 Score=60.86 Aligned_cols=76 Identities=21% Similarity=0.293 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCC-CCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~-s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
+++.+++.+.-.++..++........++.|.++||+ ++++.+.+.+.+.| +.+|....++ ++.|.|||+.|+.-.|
T Consensus 410 ~~RAvlEgia~~~~~~l~~l~~~g~~~~~i~~~GGg~a~s~~w~Qi~Adv~-g~pV~~~~~~-e~~a~GaA~lA~~~~G 486 (536)
T TIGR01234 410 LYRALIEATAFGTRMIMETFTDSGVPVEELMAAGGIARKNPVIMQIYADVT-NRPLQIVASD-QAPALGAAIFAAVAAG 486 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCccccCHHHHHHHHHhh-CCeeEeccCC-cchhHHHHHHHHHHcC
Confidence 344444444433333333322122357899999999 99999999999999 7888766554 5779999999987665
No 94
>TIGR01311 glycerol_kin glycerol kinase. This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.
Probab=94.09 E-value=0.11 Score=60.68 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~-~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
++..+++.+.-.++..++.... ....++.|.++||+++++...+.+.+.+ +.+|..... .++.|+|||+.|+.-.|
T Consensus 373 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADv~-g~pv~~~~~-~e~~alGaA~~a~~~~G 449 (493)
T TIGR01311 373 IARAALEAIAFQTRDVLEAMEKDAGVEITKLRVDGGMTNNNLLMQFQADIL-GVPVVRPKV-TETTALGAAYAAGLAVG 449 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecccccCHHHHHHHHHhc-CCeeEecCC-CcchHHHHHHHHHhhcC
Confidence 3444444444444444333321 1234789999999999999999999999 788866544 46779999999976655
No 95
>PRK10331 L-fuculokinase; Provisional
Probab=94.03 E-value=0.13 Score=59.88 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=54.8
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHcCC-CccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHH
Q psy7262 709 TRARFEELNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 787 (840)
Q Consensus 709 tr~e~e~~~~~~i~~i~~~i~~~l~~a~~-~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~ 787 (840)
+|.++ +..+++.+.-.++..++.... ....++.|.++||+++++...+.+.+.+ +.+|.... ..++.++|||+.
T Consensus 359 ~~~~l---~rAvlEgia~~~~~~~~~l~~~~~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pV~~~~-~~e~~a~GaA~l 433 (470)
T PRK10331 359 TRGHF---YRAALEGLTAQLKRNLQVLEKIGHFKASELLLVGGGSRNALWNQIKANML-DIPIKVLD-DAETTVAGAAMF 433 (470)
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEcccccCHHHHHHHHHhc-CCeeEecC-cccchHHHHHHH
Confidence 45554 444444444333333333221 1235789999999999999999999999 77886664 446889999999
Q ss_pred HHHHcC
Q psy7262 788 AAILHG 793 (840)
Q Consensus 788 a~~l~~ 793 (840)
|+.-.|
T Consensus 434 a~~~~G 439 (470)
T PRK10331 434 GWYGVG 439 (470)
T ss_pred HHHhcC
Confidence 976554
No 96
>TIGR01312 XylB D-xylulose kinase. D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.
Probab=94.00 E-value=0.15 Score=59.53 Aligned_cols=51 Identities=35% Similarity=0.576 Sum_probs=44.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|.++||.++++.+.+.+.+.+ +.+|.... ..++.|.|||++|+.-.+
T Consensus 390 ~~~~i~~~GG~s~s~~~~Q~~Adv~-g~pv~~~~-~~e~~a~GaA~~a~~~~g 440 (481)
T TIGR01312 390 PIQSIRLIGGGAKSPAWRQMLADIF-GTPVDVPE-GEEGPALGAAILAAWALG 440 (481)
T ss_pred CcceEEEeccccCCHHHHHHHHHHh-CCceeecC-CCcchHHHHHHHHHHhcC
Confidence 4789999999999999999999999 77787664 556889999999987665
No 97
>KOG2517|consensus
Probab=94.00 E-value=0.18 Score=57.62 Aligned_cols=77 Identities=22% Similarity=0.321 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCc-cCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCC
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDK-AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 794 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~-~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~ 794 (840)
+....++.|.-.+++.|+...... ..|+.+.+.||.|+.|.+.+.+.+.+ +.++..+.+++. |+.|||++|+..+++
T Consensus 388 ia~A~leai~fqtr~Il~am~~~~~~~i~~L~~~GG~s~N~ll~Q~~ADi~-g~pv~~p~~~e~-~~~GaA~l~~~a~~~ 465 (516)
T KOG2517|consen 388 LARAALEAIAFQTREILEAMERDGGHPISTLRVCGGLSKNPLLMQLQADIL-GLPVVRPQDVEA-VALGAAMLAGAASGK 465 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeeccccccCHHHHHHHHHHh-CCccccccchhH-HHHHHHHHHHhhcCC
Confidence 333445555444444444433333 57889999999999999999999999 688988888887 999999999988874
No 98
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=93.55 E-value=0.77 Score=51.99 Aligned_cols=75 Identities=20% Similarity=0.228 Sum_probs=45.3
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHcCCcEEEee---cchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEee
Q psy7262 484 NAVITVPAYFNDSQRQATKDSGTIAGLNVLRII---NEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTI 560 (840)
Q Consensus 484 ~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~~v---~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~ 560 (840)
-|.||==.-=...++..+...+..||==++.-. .|..=|+...+...- .......|+=+|||||||-+++++-
T Consensus 87 AVIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~----S~~~~~~V~NiDIGGGTtN~avf~~ 162 (473)
T PF06277_consen 87 AVIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAAL----SKEHHTVVANIDIGGGTTNIAVFDN 162 (473)
T ss_pred cEEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHH----hhhhCCeEEEEEeCCCceeEEEEEC
Confidence 456665555566777778888888872121111 244444333222111 1124567899999999999999986
Q ss_pred cc
Q psy7262 561 ED 562 (840)
Q Consensus 561 ~~ 562 (840)
+.
T Consensus 163 G~ 164 (473)
T PF06277_consen 163 GE 164 (473)
T ss_pred CE
Confidence 53
No 99
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
Probab=93.45 E-value=0.19 Score=59.05 Aligned_cols=51 Identities=20% Similarity=0.279 Sum_probs=43.9
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|.++||.++++...+.+.+.+ +.+|....++ ++.+.|||++|+.-.|
T Consensus 401 ~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~~~-e~~a~GaA~la~~~~G 451 (505)
T TIGR01314 401 PLNMIQATGGFASSEVWRQMMSDIF-EQEIVVPESY-ESSCLGACILGLKALG 451 (505)
T ss_pred CCcEEEEecCcccCHHHHHHHHHHc-CCeeEecCCC-CcchHHHHHHHHHhcC
Confidence 5789999999999999999999999 7888766555 5789999999986655
No 100
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=93.45 E-value=0.18 Score=58.38 Aligned_cols=50 Identities=22% Similarity=0.290 Sum_probs=42.5
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|.++||++++++..+.+.+.+ +.+|... +.++.|.|||+.|+.-.|
T Consensus 387 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~--~~e~~a~GaA~~a~~~~G 436 (454)
T TIGR02627 387 PISQLHIVGGGSQNAFLNQLCADAC-GIRVIAG--PVEASTLGNIGVQLMALD 436 (454)
T ss_pred CcCEEEEECChhhhHHHHHHHHHHh-CCceEcC--CchHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999 7777644 356889999999986554
No 101
>PLN02295 glycerol kinase
Probab=93.39 E-value=0.2 Score=58.94 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHc----CC--CccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHH
Q psy7262 715 ELNADLFRGTMEPVEKSLRDA----KM--DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 715 ~~~~~~i~~i~~~i~~~l~~a----~~--~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a 788 (840)
++++.+++.+.=.++..++.. +. ....++.|.++||+++++.+.+.+.+.+ +.+|..+. ..++.|+|||+.|
T Consensus 380 ~l~RAvlEgia~~~r~~l~~l~~~~~~~~~~~~~~~i~~~GGga~s~~w~Qi~ADv~-g~pV~~~~-~~e~~alGaA~~A 457 (512)
T PLN02295 380 HIARAVLESMCFQVKDVLDAMRKDAGEEKSHKGLFLLRVDGGATANNLLMQIQADLL-GSPVVRPA-DIETTALGAAYAA 457 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceEEEeccchhCHHHHHHHHHhc-CCceEecC-ccccHHHHHHHHH
Confidence 344445555544444444432 21 2235788999999999999999999999 88886654 4468899999999
Q ss_pred HHHcC
Q psy7262 789 AILHG 793 (840)
Q Consensus 789 ~~l~~ 793 (840)
+.-.+
T Consensus 458 ~~~~G 462 (512)
T PLN02295 458 GLAVG 462 (512)
T ss_pred HhhcC
Confidence 76655
No 102
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional
Probab=92.98 E-value=0.24 Score=58.35 Aligned_cols=51 Identities=25% Similarity=0.368 Sum_probs=43.6
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|.++||+++++...+.+.+.+ +.+|....++ ++.++|||++|+.-.|
T Consensus 409 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~~~-e~~alGaA~lA~~~~G 459 (520)
T PRK10939 409 FPSSLVFAGGGSKGKLWSQILADVT-GLPVKVPVVK-EATALGCAIAAGVGAG 459 (520)
T ss_pred CCcEEEEeCCcccCHHHHHHHHHhc-CCeeEEeccc-CchHHHHHHHHHHHhC
Confidence 4789999999999999999999999 8888766545 5779999999976655
No 103
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=92.72 E-value=0.27 Score=57.17 Aligned_cols=50 Identities=18% Similarity=0.193 Sum_probs=42.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|.++||+++++...+.+.+.+ +.+|.... .++.+.|||+.|+.-.|
T Consensus 375 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~--~ea~alGaa~~a~~a~G 424 (471)
T PRK10640 375 PFSQLHIVGGGCQNALLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLMTLD 424 (471)
T ss_pred CcceEEEECChhhhHHHHHHHHHHh-CCCeeeCC--hhHHHHHHHHHHHHHcC
Confidence 4788999999999999999999999 77775543 37889999999976555
No 104
>KOG2531|consensus
Probab=92.51 E-value=0.37 Score=53.43 Aligned_cols=55 Identities=22% Similarity=0.375 Sum_probs=45.8
Q ss_pred HcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHH
Q psy7262 734 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 734 ~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
..+......+.|++|||.|+...|-+.|.+.| +.++... +...+.|.|+|+.|+.
T Consensus 435 ~lg~~~~~~~rilvtGGAS~N~~Ilq~iadVf-~apVy~~-~~~~sa~lG~A~ra~y 489 (545)
T KOG2531|consen 435 PLGFKSNPPTRILVTGGASRNEAILQIIADVF-GAPVYTI-EGPNSAALGGAYRAAY 489 (545)
T ss_pred cccCCCCCCceEEEecCccccHHHHHHHHHHh-CCCeEee-cCCchhhHHHHHHHHH
Confidence 34555557789999999999999999999999 7777655 7777899999999764
No 105
>PLN02666 5-oxoprolinase
Probab=91.89 E-value=2.8 Score=53.97 Aligned_cols=77 Identities=12% Similarity=0.080 Sum_probs=48.5
Q ss_pred EehHHHHHHHHHHH-HHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHH
Q psy7262 708 ITRARFEELNADLF-RGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 786 (840)
Q Consensus 708 itr~e~e~~~~~~i-~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal 786 (840)
++-++....+..+. +.+.+.|+......+.++.+. .++..|| .=|...-.|.+.++-..++.+.+|.-.-|.|+++
T Consensus 454 ~~~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~~-~l~afGG--agp~ha~~lA~~lgi~~vivP~~~gv~sA~G~~~ 530 (1275)
T PLN02666 454 MSVEEVALGFVRVANEAMCRPIRQLTEMKGYETANH-ALACFGG--AGPQHACAIARALGMSEVFVHRYCGILSAYGMGL 530 (1275)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCc-eEEEecC--cHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHh
Confidence 45555554333333 445566666666666665432 2333344 4478888899999555588888898888999885
Q ss_pred H
Q psy7262 787 Q 787 (840)
Q Consensus 787 ~ 787 (840)
-
T Consensus 531 a 531 (1275)
T PLN02666 531 A 531 (1275)
T ss_pred h
Confidence 4
No 106
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=91.12 E-value=0.93 Score=53.17 Aligned_cols=51 Identities=27% Similarity=0.325 Sum_probs=38.8
Q ss_pred cCccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHH
Q psy7262 740 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 791 (840)
Q Consensus 740 ~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l 791 (840)
..++.|.++||+|++++..+.+.+.+ +.++..+...+.+.+-||++.+...
T Consensus 400 ~~~~~i~~~GGgars~~w~Qi~Ad~~-g~~v~~~~~~e~~a~g~A~~~~~~~ 450 (502)
T COG1070 400 KPPSRVRVVGGGARSPLWLQILADAL-GLPVVVPEVEEAGALGGAALAAAAL 450 (502)
T ss_pred CCccEEEEECCcccCHHHHHHHHHHc-CCeeEecCcccchHHHHHHHHHHHh
Confidence 34678999999999999999999999 8788766555555555555555444
No 107
>KOG0681|consensus
Probab=91.09 E-value=0.21 Score=56.37 Aligned_cols=49 Identities=18% Similarity=0.368 Sum_probs=42.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHhHcC-------CCcccCCCChhhHHHHHHHHHHHH
Q psy7262 742 IHDIVLVGGSTRIPKVQKLLQDFFN-------GKELNKSINPDEAVAYGAAVQAAI 790 (840)
Q Consensus 742 Id~V~LvGG~s~~p~v~~~l~~~f~-------~~~v~~~~~p~~aVA~GAal~a~~ 790 (840)
|+.|+||||+|.+|.+.++|+..+- ...|....||....=+||+.+|+.
T Consensus 559 V~nVllTGG~s~~pGmkeRi~kElt~mrP~gS~i~V~rasdP~LDAW~GA~~~a~n 614 (645)
T KOG0681|consen 559 VSNVLLTGGCSQLPGMKERIKKELTSMRPVGSSINVVRASDPVLDAWRGASAWAAN 614 (645)
T ss_pred hhheEeecccccCcCHHHHHHHHhheecccCCceEEEecCCcchhhhhhhHHhhcC
Confidence 7899999999999999999998873 235677889999999999999864
No 108
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.
Probab=88.93 E-value=1.1 Score=48.01 Aligned_cols=71 Identities=25% Similarity=0.328 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhH----cCCCcccCCCChhhHHHHHHHHHH
Q psy7262 715 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF----FNGKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 715 ~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~----f~~~~v~~~~~p~~aVA~GAal~a 788 (840)
++++...+.+.+.+...+.+...... .|+|+||....+.+++.+.+. .+..++..+..|....|.||+++|
T Consensus 197 ~Il~~a~~~la~~i~~~~~~~~~~~~---~v~l~GGv~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 197 DILAEAADELAELIKAVLKRLGPEKE---PVVLSGGVFKNSPLVKALRDALKEKLPKVPIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTCCCC---SEEEESGGGGCHHHHHHHGGGS-HHHHCCTCECECCGSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCC---eEEEECCccCchHHHHHHHHHHHHhcCCCceEECCCCCccHHHHHHHhC
Confidence 34455555666666666666543322 299999999998777777444 344456677789999999999986
No 109
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T.
Probab=87.65 E-value=1.2 Score=41.37 Aligned_cols=19 Identities=21% Similarity=0.438 Sum_probs=14.9
Q ss_pred EEEEecCCCceEEEEEeec
Q psy7262 543 VLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 543 vLVvDiGGGTtDis~~~~~ 561 (840)
|+++|||++|+.+.+++.+
T Consensus 1 i~~iDiGs~~~~~~i~~~~ 19 (120)
T PF14450_consen 1 IVVIDIGSSKTKVAIAEDG 19 (120)
T ss_dssp EEEEEE-SSSEEEEEEETT
T ss_pred CEEEEcCCCcEEEEEEEeC
Confidence 5789999999999888754
No 110
>KOG0677|consensus
Probab=87.47 E-value=2.2 Score=43.95 Aligned_cols=221 Identities=17% Similarity=0.233 Sum_probs=121.3
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+.+|-|.-=....|+.|-+.. +..||.-+.+.-...-+ -|+... ..-+|||-|-|-|-+.-+--+
T Consensus 102 ~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLt--LYAQGL----------~tGvVvDSGDGVTHi~PVye~ 169 (389)
T KOG0677|consen 102 CKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLT--LYAQGL----------LTGVVVDSGDGVTHIVPVYEG 169 (389)
T ss_pred CeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHH--HHHhcc----------cceEEEecCCCeeEEeeeecc
Confidence 58999999988888888876654 67899887765443333 232211 123789999997765432100
Q ss_pred cCcccCCCCceeEEEecCCCccccceeeeeecccccCCCCCCceEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCch
Q psy7262 562 DGIFEGSGERNVLIFDLGGGTFDVSILTIEEYFPLRSWGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 641 (840)
Q Consensus 562 ~~~~~~~g~~~~~~~d~Gg~~~d~~~~~~~~~~p~~~~~~~~~~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG 641 (840)
..+.-+ ..-..+.|
T Consensus 170 ----------------------------------------------------------------~~l~HL--trRldvAG 183 (389)
T KOG0677|consen 170 ----------------------------------------------------------------FVLPHL--TRRLDVAG 183 (389)
T ss_pred ----------------------------------------------------------------eehhhh--hhhccccc
Confidence 000000 11145788
Q ss_pred hhhhhHHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHHHcCCC-----------CeeEEEEe--cccCCeeeEEEE
Q psy7262 642 EDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS-----------TQASIEID--SLFEGVDFYTSI 708 (840)
Q Consensus 642 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----------~~~~i~i~--~~~~~~~~~~~i 708 (840)
+++.+-+.+.|+.+=- .+.+.. + ...++..|+.|.-. .++++-++ .+.+|. .+.+
T Consensus 184 RdiTryLi~LLl~rGY-afN~tA--D-------FETVR~iKEKLCYisYd~e~e~kLalETTvLv~~YtLPDGR--vIkv 251 (389)
T KOG0677|consen 184 RDITRYLIKLLLRRGY-AFNHTA--D-------FETVREIKEKLCYISYDLELEQKLALETTVLVESYTLPDGR--VIKV 251 (389)
T ss_pred hhHHHHHHHHHHhhcc-cccccc--c-------hHHHHHHHhhheeEeechhhhhHhhhhheeeeeeeecCCCc--EEEe
Confidence 9998888887764310 111100 0 11223334433211 01111111 122332 2455
Q ss_pred ehHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCCc--cCccEEEEEcCCCCcHHHHHHHHhHcCC-----------
Q psy7262 709 TRARFE---ELNADLF-----RGTMEPVEKSLRDAKMDK--AQIHDIVLVGGSTRIPKVQKLLQDFFNG----------- 767 (840)
Q Consensus 709 tr~e~e---~~~~~~i-----~~i~~~i~~~l~~a~~~~--~~Id~V~LvGG~s~~p~v~~~l~~~f~~----------- 767 (840)
--+.|+ .+++|.+ ..+.+++-++++.+.++. .--.+|+|.||++.-|.+-.++++.+..
T Consensus 252 G~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lYkhIVLSGGstMYPGLPSRLEkElkqlyl~rVL~~d~ 331 (389)
T KOG0677|consen 252 GGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELYKHIVLSGGSTMYPGLPSRLEKELKQLYLDRVLKGDT 331 (389)
T ss_pred cceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHHhHeeecCCcccCCCCcHHHHHHHHHHHHHHHHcCCh
Confidence 556664 4666643 345666677777665542 2347899999999999988888766521
Q ss_pred -----Cccc--CCCChhhHHHHHHHHHHHHHcC
Q psy7262 768 -----KELN--KSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 768 -----~~v~--~~~~p~~aVA~GAal~a~~l~~ 793 (840)
-++. .+..---.|-.|.|.+|..+..
T Consensus 332 ~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD 364 (389)
T KOG0677|consen 332 DKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKD 364 (389)
T ss_pred hhhhheEEeccCCCccceeEEEchHHHHHHhcC
Confidence 1122 2222234577777777876664
No 111
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=84.12 E-value=20 Score=38.69 Aligned_cols=23 Identities=35% Similarity=0.537 Sum_probs=18.8
Q ss_pred CCceEEEEecCCCceEEEEEeec
Q psy7262 539 GERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 539 ~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
+...|+=+||||||+.+|++.-+
T Consensus 143 r~t~v~NlDIGGGTtN~slFD~G 165 (473)
T COG4819 143 RLTRVLNLDIGGGTTNYSLFDAG 165 (473)
T ss_pred hceEEEEEeccCCccceeeeccc
Confidence 44568999999999999998543
No 112
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type. This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).
Probab=83.43 E-value=2.4 Score=45.27 Aligned_cols=47 Identities=21% Similarity=0.100 Sum_probs=40.2
Q ss_pred cCccEEEEEcC-CCCcHHHHHHHHhHc--CCCcccCCCChhhHHHHHHHH
Q psy7262 740 AQIHDIVLVGG-STRIPKVQKLLQDFF--NGKELNKSINPDEAVAYGAAV 786 (840)
Q Consensus 740 ~~Id~V~LvGG-~s~~p~v~~~l~~~f--~~~~v~~~~~p~~aVA~GAal 786 (840)
..+..|+++|| ....|.+++.+...+ .+.++..+.++...+|.||++
T Consensus 229 ~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~~~~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 229 YNIDRIVFIGSFLRNNQLLMKVLSYATNFWSKKALFLEHEGYSGAIGALL 278 (279)
T ss_pred cCCCeEEEECCcccCCHHHHHHHHHHHhhcCceEEEECCcchHHHhhhcc
Confidence 45788999999 778999999998875 346778889999999999986
No 113
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional
Probab=82.28 E-value=6.2 Score=46.17 Aligned_cols=58 Identities=26% Similarity=0.346 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEe
Q psy7262 497 QRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 497 ~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~ 559 (840)
....+.++-+..|++.-.+--|-||--.+.+.....+ ..+..+|+|||||+|.+++++
T Consensus 93 ~~~fl~~i~~~tGl~ievIsG~eEA~l~~~gv~~~l~-----~~~~~lviDIGGGStEl~~~~ 150 (496)
T PRK11031 93 ADEFLAKAQEILGCPVQVISGEEEARLIYQGVAHTTG-----GADQRLVVDIGGASTELVTGT 150 (496)
T ss_pred HHHHHHHHHHHHCCCeEEeCHHHHHHHHHHhhhhccC-----CCCCEEEEEecCCeeeEEEec
Confidence 3444666667779977444444555433334444322 223589999999999999875
No 114
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=82.12 E-value=4.3 Score=45.97 Aligned_cols=86 Identities=19% Similarity=0.280 Sum_probs=57.2
Q ss_pred EEEehHH-HHHHHHHHHHHHHHHHHHHHHHcCCCcc-CccEEEEEcCCCCcHHHHHHHHhHcCCCcccCCCChhhHHHHH
Q psy7262 706 TSITRAR-FEELNADLFRGTMEPVEKSLRDAKMDKA-QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYG 783 (840)
Q Consensus 706 ~~itr~e-~e~~~~~~i~~i~~~i~~~l~~a~~~~~-~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVA~G 783 (840)
+-|||.- -+.+++..++.+.=...+.++....... .++.+-+=||++++.++.+...+.+ +.+|.++. -.+..|.|
T Consensus 365 ~Gltrgt~~~hi~RA~LEsiayQ~~dv~~aM~~d~~~~~~~LrvDGG~s~n~~lmQfqADil-g~~V~Rp~-~~EtTAlG 442 (499)
T COG0554 365 FGLTRGTTKAHIARATLESIAYQTRDVLEAMEKDSGIKLTRLRVDGGASRNNFLMQFQADIL-GVPVERPV-VLETTALG 442 (499)
T ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEcCccccchhHHHHHHHHh-CCeeeccc-cchhhHHH
Confidence 4455432 2334444555554444444443322211 5778888899999999999999999 78888774 44677999
Q ss_pred HHHHHHHHcC
Q psy7262 784 AAVQAAILHG 793 (840)
Q Consensus 784 Aal~a~~l~~ 793 (840)
||++|..-.|
T Consensus 443 aA~lAGla~G 452 (499)
T COG0554 443 AAYLAGLAVG 452 (499)
T ss_pred HHHHHhhhhC
Confidence 9999976555
No 115
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=82.05 E-value=25 Score=38.54 Aligned_cols=74 Identities=24% Similarity=0.367 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCC---cccCCCCh----hhHHHHHHHHHHH
Q psy7262 717 NADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK---ELNKSINP----DEAVAYGAAVQAA 789 (840)
Q Consensus 717 ~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~---~v~~~~~p----~~aVA~GAal~a~ 789 (840)
++.+++.+.+.|...+.. ..+++.|+|.|-.+++|-+++.+++.|.+. ++. ...+ ....|.|||+.|.
T Consensus 240 ~ea~~E~i~k~V~~l~~~----~~~~~~IilSGr~~~~~~~~~~l~~~l~~~~~~~v~-~l~~~~~~aKeaA~GaAiIA~ 314 (343)
T PF07318_consen 240 WEAMIESIVKAVASLLAS----VPDPDEIILSGRFSRIPEFRKKLEDRLEDYFPVKVR-KLEGLARKAKEAAQGAAIIAN 314 (343)
T ss_pred HHHHHHHHHHHHHHHhcc----cCCCCEEEEeccccccHHHHHHHHHHHHhhccccee-ecccccccchhhhhhHHHHhh
Confidence 344445555555544333 235688999999999999988888887332 221 1222 2347999999998
Q ss_pred HHcCCC
Q psy7262 790 ILHGDK 795 (840)
Q Consensus 790 ~l~~~~ 795 (840)
.+.+..
T Consensus 315 glaGG~ 320 (343)
T PF07318_consen 315 GLAGGR 320 (343)
T ss_pred hhhccc
Confidence 888744
No 116
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
Probab=80.90 E-value=6.3 Score=45.70 Aligned_cols=57 Identities=21% Similarity=0.298 Sum_probs=40.8
Q ss_pred HHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEe
Q psy7262 498 RQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 498 r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~ 559 (840)
.+.+..+-+..|++.-.+--|-||--.+.+.-...+ .....+|+|||||+|.+++..
T Consensus 91 ~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~-----~~~~~lv~DIGGGStEl~~g~ 147 (492)
T COG0248 91 DEFLARVEKELGLPIEVISGEEEARLIYLGVASTLP-----RKGDGLVIDIGGGSTELVLGD 147 (492)
T ss_pred HHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCC-----CCCCEEEEEecCCeEEEEEec
Confidence 445888888889977555556666655555544432 256789999999999999875
No 117
>PRK10854 exopolyphosphatase; Provisional
Probab=80.59 E-value=6.4 Score=46.27 Aligned_cols=58 Identities=19% Similarity=0.259 Sum_probs=36.8
Q ss_pred HHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEee
Q psy7262 498 RQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTI 560 (840)
Q Consensus 498 r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~ 560 (840)
...+.++-+..|++.-.+--|-||...+.+.....+ .....+|+|||||+|.+++++-
T Consensus 99 ~~fl~~i~~~tGl~i~vIsG~EEA~l~~~gv~~~l~-----~~~~~lvvDIGGGStEl~~~~~ 156 (513)
T PRK10854 99 TDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQP-----EKGRKLVIDIGGGSTELVIGEN 156 (513)
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHhhhhcccC-----CCCCeEEEEeCCCeEEEEEecC
Confidence 344556666679877444444455433334444332 2246899999999999999864
No 118
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3.6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.
Probab=79.04 E-value=3.9 Score=44.05 Aligned_cols=55 Identities=20% Similarity=0.341 Sum_probs=34.3
Q ss_pred HHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEee
Q psy7262 501 TKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTI 560 (840)
Q Consensus 501 l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~ 560 (840)
+.+.-+..|++.-.+=.|-+|...+.+..... ......+|+|+|||+|.++.++-
T Consensus 77 ~~~i~~~tGi~i~iIsgeeEa~l~~~gv~~~l-----~~~~~~lviDIGGGStEl~~~~~ 131 (285)
T PF02541_consen 77 LDRIKKETGIDIEIISGEEEARLSFLGVLSSL-----PPDKNGLVIDIGGGSTELILFEN 131 (285)
T ss_dssp HHHHHHHHSS-EEEE-HHHHHHHHHHHHHHHS-----TTTSSEEEEEEESSEEEEEEEET
T ss_pred HHHHHHHhCCceEEecHHHHHHHHHHHHHhhc-----cccCCEEEEEECCCceEEEEEEC
Confidence 55555667987644444555544333443332 24567899999999999999863
No 119
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=76.88 E-value=7.9 Score=43.15 Aligned_cols=70 Identities=24% Similarity=0.290 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCccc------CCCChhhHHHHHHHHHHH
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN------KSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~------~~~~p~~aVA~GAal~a~ 789 (840)
+++-+.+=....|.+.+++... +++.|+++||+++.|+|.+.|++.+++.+|. .+.+.-||++. |++|.
T Consensus 262 ~~aTlt~~TA~sI~~~i~~~~~---~~~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi~~~~~EA~aF--A~La~ 336 (364)
T PF03702_consen 262 ILATLTEFTAQSIADAIRRFPP---QPDEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGIPPDAKEAMAF--AWLAY 336 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T---T-EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS-CCCHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCC---CCceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCCCHHHHHHHHH--HHHHH
Confidence 3333444444555555555432 3789999999999999999999999775553 23344456554 56664
Q ss_pred H
Q psy7262 790 I 790 (840)
Q Consensus 790 ~ 790 (840)
.
T Consensus 337 ~ 337 (364)
T PF03702_consen 337 R 337 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 120
>PRK03011 butyrate kinase; Provisional
Probab=76.45 E-value=11 Score=41.89 Aligned_cols=69 Identities=16% Similarity=0.137 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcC---CCcccCCCChhhHHHHHHHHH
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN---GKELNKSINPDEAVAYGAAVQ 787 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~---~~~v~~~~~p~~aVA~GAal~ 787 (840)
+++.+...+...|-......+ .++|.|+|+||.+..+.+++.|++.+. ...+....+..+|.+.||+..
T Consensus 273 ald~~~~~lak~I~~l~~~L~---gdpD~IVlgGGI~~~~~l~~~I~~~l~~~~pv~i~p~~~e~~A~a~GA~rv 344 (358)
T PRK03011 273 VYEAMAYQIAKEIGAMAAVLK---GKVDAIVLTGGLAYSKRLVERIKERVSFIAPVIVYPGEDEMEALAEGALRV 344 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEEeCccccCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 333344444444443333321 257999999999999999999988763 334555566778999998843
No 121
>PRK11678 putative chaperone; Provisional
Probab=73.03 E-value=3.6 Score=47.44 Aligned_cols=25 Identities=44% Similarity=0.767 Sum_probs=21.5
Q ss_pred CCceEEEEEcCCceeEEEEEEEeCC
Q psy7262 602 GERNVLIFDLGGGTFDVSILTIEDG 626 (840)
Q Consensus 602 ~~~~v~v~D~Gggt~d~s~~~~~~~ 626 (840)
..+.++|+|+||||+|+|++++.+.
T Consensus 207 ~~~~vlV~D~GGGT~D~Svv~~~~~ 231 (450)
T PRK11678 207 EEKRVLVVDIGGGTTDCSMLLMGPS 231 (450)
T ss_pred CCCeEEEEEeCCCeEEEEEEEecCc
Confidence 3567999999999999999998654
No 122
>TIGR03706 exo_poly_only exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.
Probab=69.82 E-value=21 Score=38.71 Aligned_cols=54 Identities=20% Similarity=0.409 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCcEEEeecchHHHHHHhh-cccccCCCCCCCCceEEEEecCCCceEEEEEe
Q psy7262 499 QATKDSGTIAGLNVLRIINEPTAAAIAYG-LDKKVGSTAGSGERNVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 499 ~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~-~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~ 559 (840)
..+...-+..|++. .+++..+=|.+.|. .....+ .. ..+++|+|||+|.++.+.
T Consensus 89 ~~~~~i~~~tgi~i-~visg~eEa~l~~~gv~~~~~-----~~-~~~v~DiGGGSte~~~~~ 143 (300)
T TIGR03706 89 EFLREAEAILGLPI-EVISGEEEARLIYLGVAHTLP-----IA-DGLVVDIGGGSTELILGK 143 (300)
T ss_pred HHHHHHHHHHCCCe-EEeChHHHHHHHHHHHHhCCC-----CC-CcEEEEecCCeEEEEEec
Confidence 33444445679865 67776666666553 222211 12 249999999999999875
No 123
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=69.69 E-value=30 Score=38.61 Aligned_cols=47 Identities=23% Similarity=0.371 Sum_probs=33.1
Q ss_pred ccEEEEEcCCCCcHHHHHHHHhHcCCCcccCC----CChhhHHHHHHHHHHH
Q psy7262 742 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS----INPDEAVAYGAAVQAA 789 (840)
Q Consensus 742 Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~~----~~p~~aVA~GAal~a~ 789 (840)
++.|+++||+++.|+|.+.|++.+| .++... .+|+.-=|..-|++|.
T Consensus 287 ~~~vlv~GGGa~N~~Lm~~L~~~l~-~~v~~~~~~G~~~da~EA~aFA~La~ 337 (365)
T PRK09585 287 PDELLVCGGGARNPTLMERLAALLP-TEVATTDALGIDGDAKEALAFAWLAV 337 (365)
T ss_pred CCEEEEECCCcchHHHHHHHHHhcC-CcccCHHHcCCChhHHHHHHHHHHHH
Confidence 4689999999999999999999996 444322 3444333444566664
No 124
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=69.35 E-value=11 Score=45.63 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=28.6
Q ss_pred EEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 513 LRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 513 v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
..+.+=|.|..+...+-... ..+ +++++|+||.|||++++.-+
T Consensus 256 ~tI~SGPAagvvGAa~ltg~-----~~g-~~i~~DmGGTStDva~i~~G 298 (674)
T COG0145 256 ETILSGPAAGVVGAAYLTGL-----KAG-NAIVFDMGGTSTDVALIIDG 298 (674)
T ss_pred eeEeeccHHHHHHHHHhccc-----ccC-CEEEEEcCCcceeeeeeecC
Confidence 34556676666655433111 122 59999999999999999854
No 125
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=64.48 E-value=27 Score=37.57 Aligned_cols=50 Identities=20% Similarity=0.304 Sum_probs=39.5
Q ss_pred ccEEEEEcC--CCCcH-HHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcCC
Q psy7262 742 IHDIVLVGG--STRIP-KVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 794 (840)
Q Consensus 742 Id~V~LvGG--~s~~p-~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~~ 794 (840)
...|+|.|- +++.| .+++.|++.+ +.++.. ++. .+.|.|+|+.|.-+.+.
T Consensus 263 ~~~IvLSGs~g~~r~~~~v~~~I~~~L-~~~V~~-L~~-ksAA~G~AiIA~dI~gG 315 (326)
T TIGR03281 263 EAGVVLAGSGGTLREPINFSGKIKRVL-SCKVLV-LDS-ESAAIGLALIAEDIFSG 315 (326)
T ss_pred CCcEEEeCcchhccCchHHHHHHHHHh-CCCeEE-ecc-hhhhhhHHHHHHHHhCC
Confidence 347999988 99999 9999999999 454432 233 67799999999877763
No 126
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=62.50 E-value=12 Score=45.63 Aligned_cols=49 Identities=29% Similarity=0.365 Sum_probs=37.9
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcC--CCcccCCC---ChhhHHHHHHHHHHH
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAA 789 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVA~GAal~a~ 789 (840)
.++.|+|+||.++..++++.+.+.+. +.++..+. -.|.+++.|.|++|+
T Consensus 658 g~~~VvLSGGVfqN~~L~~~L~~~L~~~g~~v~~p~~~p~nDgGislGQa~~a~ 711 (711)
T TIGR00143 658 GIHKIVISGGVFYNRLLLERLAKYLKGLGFQFLFHRHLPPGDGGISLGQAVAAA 711 (711)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHhCCCEEEccCCCCCCHHHHHHHHHHHhC
Confidence 46789999999999999999998873 23444332 346799999988774
No 127
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=60.98 E-value=5.1 Score=45.58 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=26.2
Q ss_pred eEEEEEcCCceeEEEEEEEeCCeEEEEEeeCCCCCchhhhhhH
Q psy7262 605 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 647 (840)
Q Consensus 605 ~v~v~D~Gggt~d~s~~~~~~~~~~~~~~~~~~~lGG~~~d~~ 647 (840)
.++++|+||||+++++++...-.+ .+...+||+.+...
T Consensus 147 gVa~IDIGgGTT~iaVf~~G~l~~-----T~~l~vGG~~IT~D 184 (475)
T PRK10719 147 RVLNIDIGGGTANYALFDAGKVID-----TACLNVGGRLIETD 184 (475)
T ss_pred ceEEEEeCCCceEEEEEECCEEEE-----EEEEecccceEEEC
Confidence 388899999999999877543332 23356788877443
No 128
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors []. The cmcH genes of Nocardia lactamdurans and Streptomyces clavuligerus encode a functional 3'-hydroxymethylcephem O-carbamoyltransferase 2.1.3.7 from EC for cephamycin biosynthesis that shows significant similarity to the O-carbamoyltransferases [].; GO: 0003824 catalytic activity, 0009058 biosynthetic process; PDB: 3VES_A 3VER_A 3VEN_A 3VF2_A 3VEX_A 3VEW_A 3VET_A 3VEO_A 3VEZ_A 3VF4_A.
Probab=60.76 E-value=41 Score=37.63 Aligned_cols=82 Identities=20% Similarity=0.159 Sum_probs=55.2
Q ss_pred EEehHHHHHHHHHHHHHHH-HHHHHHHHHcCCCccCccE-EEEEcCCCCcHHHHHHHHhHcCCCcc-cCCCChhhHHHHH
Q psy7262 707 SITRARFEELNADLFRGTM-EPVEKSLRDAKMDKAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKEL-NKSINPDEAVAYG 783 (840)
Q Consensus 707 ~itr~e~e~~~~~~i~~i~-~~i~~~l~~a~~~~~~Id~-V~LvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~aVA~G 783 (840)
.-.+.++...++..+++++ ..++.++++.+ ++. +.|.||.+..-.+-..|.+..+-.++ +.|.-.|..+|.|
T Consensus 132 ~~~~~dlAa~~Q~~~E~~v~~~~~~~~~~~g-----~~~~L~laGGvaLN~~~N~~l~~~~~~~~v~V~Pa~gD~G~aiG 206 (360)
T PF02543_consen 132 TQRHADLAASAQKVLEEIVLHLVRHLLERTG-----IDNNLCLAGGVALNCKANGRLLEEPGFDNVFVPPAAGDAGLAIG 206 (360)
T ss_dssp ESS-HHHHHHHHHHHHHHHHHHHHHHHHHHT-------SEEEEESGGGG-HHHHHHHHTSTT-SEEE--TTTSGGGHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEechHHHHHHHHHHHHhcCCCCeEEECCCCCCcchHHH
Confidence 4456777777777776654 55566666655 345 99999999998888888887433444 3444567889999
Q ss_pred HHHHHHHHcC
Q psy7262 784 AAVQAAILHG 793 (840)
Q Consensus 784 Aal~a~~l~~ 793 (840)
||+++....+
T Consensus 207 aA~~~~~~~~ 216 (360)
T PF02543_consen 207 AALYAWHELG 216 (360)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 9999986554
No 129
>PRK00976 hypothetical protein; Provisional
Probab=59.74 E-value=47 Score=36.33 Aligned_cols=50 Identities=18% Similarity=0.297 Sum_probs=38.1
Q ss_pred CccEEEEEcCCCCcH--HHHHHHHhHcCCCcccCCCChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIP--KVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p--~v~~~l~~~f~~~~v~~~~~p~~aVA~GAal~a~~l~~ 793 (840)
+++.|+|-||.++.+ .+.+.+++.+.. . ...-...|-++|||+.|..+.+
T Consensus 263 DPe~IVLGGGVS~~~e~~L~~~I~e~l~~-~--~a~LG~dAGaiGAA~iA~~i~~ 314 (326)
T PRK00976 263 PEDNVVLAGSVGEMDEPDVSERIKELLDK-K--VLVLGKESAAIGLALIARDIFN 314 (326)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHhcc-c--ccccCCchHHHHHHHHHHHHhC
Confidence 467899999999998 899999988733 2 2222447889999999977654
No 130
>KOG1385|consensus
Probab=57.98 E-value=62 Score=36.24 Aligned_cols=131 Identities=18% Similarity=0.256 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhhhccCCccceEEEeeCCCCC---HHHHHHHHHHHHHc----C-C----cEEEe
Q psy7262 448 EVSSMVLTKMKETAEAYLGKTVSNAVITAYLGKTVSNAVITVPAYFN---DSQRQATKDSGTIA----G-L----NVLRI 515 (840)
Q Consensus 448 ev~a~~L~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~vVitVPa~~~---~~~r~~l~~Aa~~A----G-~----~~v~~ 515 (840)
+=.|.=|+.|.+.|+..+.+..|.. .-+++---|.+- ...-+.+.+|++.. + | ..|.+
T Consensus 117 ~~aA~Sl~~LLd~A~~~vP~~~~~k----------TPi~lkATAGLRlL~~~ka~~IL~aVre~l~~~s~f~v~~d~VsI 186 (453)
T KOG1385|consen 117 EEAANSLRPLLDVAEAFVPREHWKK----------TPIVLKATAGLRLLPGSKADNILQAVRELLKNDSPFPVVEDAVSI 186 (453)
T ss_pred HHHHHhHHHHHHHHHhhCCHhHhcc----------CceEEEeecccccCChhHHHHHHHHHHHHHhccCCccccCCceee
Confidence 3456678889999998887665433 345554444442 22233344444322 1 2 33555
Q ss_pred ecchHHHHHHhhccc-ccCCCCCCCCceEEEEecCCCceEEEEEeeccCcccCCCCceeEEEecCCCccccceee
Q psy7262 516 INEPTAAAIAYGLDK-KVGSTAGSGERNVLIFDLGGGTFDVSILTIEDGIFEGSGERNVLIFDLGGGTFDVSILT 589 (840)
Q Consensus 516 v~Ep~AAAl~y~~~~-~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~~~~~~~~g~~~~~~~d~Gg~~~d~~~~~ 589 (840)
++=..--.++|..-+ -+..........|-|+|+|||+|-++..---++.+..... +.-.+|+.|...-+..++
T Consensus 187 m~GtdEGv~aWiTiN~Llg~L~~~~~~tvgv~DLGGGSTQi~f~p~~e~~~~~~~~-y~~~l~~~~~ky~LythS 260 (453)
T KOG1385|consen 187 MDGTDEGVYAWITINYLLGTLGAPGHRTVGVVDLGGGSTQITFLPTFEDTLEAPVP-YKRELDFFGRKYKLYTHS 260 (453)
T ss_pred ccCcccceeeeeehhhhhcccCCCCCCceEEEEcCCceEEEEEecCcccccccCCc-ceeeeeecCceEEEEEec
Confidence 532221112221111 1111112236789999999999999887655554444433 444556666555544444
No 131
>PRK09604 UGMP family protein; Validated
Probab=54.70 E-value=3.3e+02 Score=30.00 Aligned_cols=53 Identities=21% Similarity=0.269 Sum_probs=37.9
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcC--CCcccCCC---ChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|+|.||.+...++++.|.+.+. +.++..+. -.|.+++.|++-+-....+
T Consensus 254 ~~~~lvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~~~p~~D~gisIg~ag~~~~~~g 311 (332)
T PRK09604 254 GVKTLVVAGGVAANSGLRERLAELAKKRGIEVFIPPLKLCTDNAAMIAAAGYERLKAG 311 (332)
T ss_pred CCCeEEEcChHHHHHHHHHHHHHHHHHCCCEEECCCCCCCcHHHHHHHHHHHHHHHcC
Confidence 46789999999999999999998873 22444332 3467888888844433333
No 132
>COG3426 Butyrate kinase [Energy production and conversion]
Probab=51.81 E-value=53 Score=34.88 Aligned_cols=49 Identities=24% Similarity=0.201 Sum_probs=37.6
Q ss_pred ccCccEEEEEcCCCCcHHHHHHHHhHc---CCCcccCCCChhhHHHHHHHHH
Q psy7262 739 KAQIHDIVLVGGSTRIPKVQKLLQDFF---NGKELNKSINPDEAVAYGAAVQ 787 (840)
Q Consensus 739 ~~~Id~V~LvGG~s~~p~v~~~l~~~f---~~~~v~~~~~p~~aVA~GAal~ 787 (840)
...+|.|+|+||.++...+-++|.+.. ....+....+-.+|.|.|+...
T Consensus 294 ~G~vDaIvLTGGiA~~~~f~~~I~~~v~~iapv~v~PGE~EleALA~G~lRV 345 (358)
T COG3426 294 KGKVDAIVLTGGIAYEKLFVDAIEDRVSWIAPVIVYPGEDELEALAEGALRV 345 (358)
T ss_pred CCCCCEEEEecchhhHHHHHHHHHHHHhhhcceEecCCchHHHHHHhhhHHH
Confidence 457999999999999999999998775 2223444456778999998743
No 133
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=50.39 E-value=11 Score=41.03 Aligned_cols=21 Identities=24% Similarity=0.316 Sum_probs=18.3
Q ss_pred ceEEEEecCCCceEEEEEeec
Q psy7262 541 RNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 541 ~~vLVvDiGGGTtDis~~~~~ 561 (840)
.+++++||||.|+|+++++-+
T Consensus 128 ~~~I~~DmGGTTtDi~~i~~G 148 (318)
T TIGR03123 128 PECLFVDMGSTTTDIIPIIDG 148 (318)
T ss_pred CCEEEEEcCccceeeEEecCC
Confidence 458999999999999999754
No 134
>KOG0681|consensus
Probab=49.45 E-value=1.7e+02 Score=34.10 Aligned_cols=72 Identities=10% Similarity=0.006 Sum_probs=43.4
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHH-HHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEeec
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILTIE 561 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa-~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~~~ 561 (840)
.-+++|-+..=....|+.|.+.. +..|++.|.+=-...=+ |.++.. .. .....|||++|-.+|-+-.+--+
T Consensus 117 hPIilTE~laNP~~~R~~m~elLFE~YgvP~V~yGIDslfS---~~hN~~---~~--~~~~~liis~g~~~T~vipvldG 188 (645)
T KOG0681|consen 117 HPIILTEALANPVYSRSEMVELLFETYGVPKVAYGIDSLFS---FYHNYG---KS--SNKSGLIISMGHSATHVIPVLDG 188 (645)
T ss_pred CCeeeehhccChHHHHHHHHHHHHHHcCCcceeechhhHHH---HhhccC---cc--cCcceEEEecCCCcceeEEEecC
Confidence 46788888776667888887765 66799887653222222 211111 11 12256999999988876555433
Q ss_pred c
Q psy7262 562 D 562 (840)
Q Consensus 562 ~ 562 (840)
.
T Consensus 189 ~ 189 (645)
T KOG0681|consen 189 R 189 (645)
T ss_pred c
Confidence 3
No 135
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=48.72 E-value=38 Score=38.45 Aligned_cols=85 Identities=16% Similarity=0.138 Sum_probs=50.6
Q ss_pred eeEEEEehHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHH-hHcCCCcccCCCChhhHHH
Q psy7262 703 DFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ-DFFNGKELNKSINPDEAVA 781 (840)
Q Consensus 703 ~~~~~itr~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~-~~f~~~~v~~~~~p~~aVA 781 (840)
.-.+.||..++.++.. .-..+..-++-++++++++..+|+.|+|.||++.-=-+.+.+. ..+|....-...---.+.-
T Consensus 290 ~~~i~itq~DIr~~ql-AKaAi~aGi~~Ll~~agi~~~di~~v~lAG~FG~~l~~~~a~~iGLlP~~~~~kv~~~GN~al 368 (412)
T PF14574_consen 290 GDDIYITQKDIREFQL-AKAAIRAGIEILLEEAGISPEDIDRVYLAGGFGNYLDPESAIRIGLLPDVPAEKVRFVGNAAL 368 (412)
T ss_dssp SS-EEEEHHHHHHHHH-HHHHHHHHHHHHHHHTT--GGG--EEEEECSS-SEEEHHHHHHTTSS--S-GGGEEEEC-HHH
T ss_pred CCCEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeCcccccCCHHHHhhcCCCCCccccCEEEECcHHH
Confidence 4458899999986532 2234667778889999999999999999999999777777765 3344432211111223566
Q ss_pred HHHHHHH
Q psy7262 782 YGAAVQA 788 (840)
Q Consensus 782 ~GAal~a 788 (840)
.||.+..
T Consensus 369 ~GA~~~L 375 (412)
T PF14574_consen 369 AGARMAL 375 (412)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6777554
No 136
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=43.64 E-value=51 Score=36.15 Aligned_cols=41 Identities=20% Similarity=0.502 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHc
Q psy7262 720 LFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 765 (840)
Q Consensus 720 ~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f 765 (840)
.++-+.+...++++..+ .+.++++||-+....||+.++++.
T Consensus 245 v~~~L~~kt~rAl~~~~-----~~~lvi~GGVaaN~~LR~~l~~~~ 285 (342)
T COG0533 245 VFDMLVEKTERALKHTG-----KKELVIAGGVAANSRLREMLEEMC 285 (342)
T ss_pred HHHHHHHHHHHHHHHhC-----CCEEEEeccHHHhHHHHHHHHHHH
Confidence 44555566666666654 567999999999999999999876
No 137
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=42.94 E-value=46 Score=36.85 Aligned_cols=55 Identities=18% Similarity=0.368 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcC--CCcccCCCChhhHH
Q psy7262 720 LFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSINPDEAV 780 (840)
Q Consensus 720 ~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~--~~~v~~~~~p~~aV 780 (840)
.++.+.+.+..+++.. .++.|+++||-+...+||+.+++.+. +.++..+ .|..|.
T Consensus 247 v~~~L~~k~~~a~~~~-----~~~~lvv~GGVAaN~~LR~~l~~~~~~~~~~~~~p-~~~~ct 303 (345)
T PTZ00340 247 IFAMLVEVTERAMSHC-----GSNEVLIVGGVGCNLRLQEMMQQMAKERGGKLFAM-DERYCI 303 (345)
T ss_pred HHHHHHHHHHHHHHHh-----CCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEeC-ChHhhh
Confidence 3344445555555543 36789999999999999999999873 2344433 454443
No 138
>PF10458 Val_tRNA-synt_C: Valyl tRNA synthetase tRNA binding arm; InterPro: IPR019499 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This entry represents the C-terminal domain of Valyl-tRNA synthetase, which consists of two helices in a long alpha-hairpin. Valyl-tRNA synthetase (6.1.1.9 from EC) is an alpha monomer that belongs to class Ia.; GO: 0000166 nucleotide binding, 0004832 valine-tRNA ligase activity, 0005524 ATP binding, 0006438 valyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 1IVS_B 1GAX_B.
Probab=40.06 E-value=1.2e+02 Score=24.76 Aligned_cols=49 Identities=10% Similarity=0.142 Sum_probs=33.5
Q ss_pred HHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHHHHHHHHHHHH
Q psy7262 122 KQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIK 170 (840)
Q Consensus 122 ~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~~~ 170 (840)
+...+......++..+..+..+|.++.|....|++-.+.-.+.+.++..
T Consensus 5 E~~rL~Kel~kl~~~i~~~~~kL~n~~F~~kAP~eVve~er~kl~~~~~ 53 (66)
T PF10458_consen 5 EIERLEKELEKLEKEIERLEKKLSNENFVEKAPEEVVEKEREKLEELEE 53 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHS-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCccccccCCHHHHHHHHHHHHHHHH
Confidence 3334444455677778888888988888888887777776666666554
No 139
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=39.16 E-value=86 Score=37.06 Aligned_cols=53 Identities=15% Similarity=0.250 Sum_probs=38.0
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcC--CCcccCCC---ChhhHHHHHHHHHHHHHcC
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILHG 793 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVA~GAal~a~~l~~ 793 (840)
.++.|+|+||-+...++++.|.+.+. +.++..+. -.|.+++.|++.+.....+
T Consensus 245 g~~~lvlsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~~~~D~g~~ia~a~~~~~~~g 302 (535)
T PRK09605 245 GKDEVLLVGGVAANNRLREMLKEMCEERGADFYVPEPRFCGDNGAMIAWLGLLMYKAG 302 (535)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCccccchHHHHHHHHHHHHHcC
Confidence 36789999999999999999996652 33444443 3467889988876544443
No 140
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
Probab=39.03 E-value=5.3e+02 Score=30.33 Aligned_cols=81 Identities=21% Similarity=0.197 Sum_probs=53.0
Q ss_pred EehHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHH-HHHHhHcCCCcc-cCCCChhhHHHHHHH
Q psy7262 708 ITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ-KLLQDFFNGKEL-NKSINPDEAVAYGAA 785 (840)
Q Consensus 708 itr~e~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~-~~l~~~f~~~~v-~~~~~p~~aVA~GAa 785 (840)
....++...++..++++.-.+..-+.+... .+.+.++||.+..--.- +.+.+-+ ...+ +.|.-.|.-.|.|||
T Consensus 256 ~~~~diAasaQ~~lE~l~l~~~~~~~~~~g----~~~L~~AGGVAlNv~~N~~~l~~~~-f~dlfV~Pa~gD~G~AvGAA 330 (555)
T COG2192 256 ERAADIAASAQAYLEELVLEMLRYLREETG----EDNLALAGGVALNVKANGKLLRRGL-FEDLFVQPAMGDAGLAVGAA 330 (555)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC----ccceEEccceeeeeeehHhHhhccc-CceeEecCCCCCcchHHHHH
Confidence 344555566677777776666555554321 56799999988876666 5555554 4344 444455678999999
Q ss_pred HHHHHHcC
Q psy7262 786 VQAAILHG 793 (840)
Q Consensus 786 l~a~~l~~ 793 (840)
+++....+
T Consensus 331 l~~~~~~~ 338 (555)
T COG2192 331 LAVKRELG 338 (555)
T ss_pred HHHHHHhc
Confidence 99876554
No 141
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=37.74 E-value=76 Score=34.74 Aligned_cols=45 Identities=20% Similarity=0.293 Sum_probs=33.3
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCC--CcccCCC---ChhhHHHHHHH
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNG--KELNKSI---NPDEAVAYGAA 785 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~--~~v~~~~---~p~~aVA~GAa 785 (840)
.++.|.|.||.+...++++.|.+.+.. .++..+. -.|.+++.|++
T Consensus 259 ~~~~v~lsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~p~~D~Gi~Ig~a 308 (314)
T TIGR03723 259 GLKTLVVAGGVAANSRLRERLEELAEKAGLEVFIPPLELCTDNAAMIAAA 308 (314)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHHHHHHH
Confidence 467899999999999999999988732 2333332 34677888876
No 142
>TIGR02707 butyr_kinase butyrate kinase. This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism.
Probab=37.55 E-value=1.1e+02 Score=34.05 Aligned_cols=67 Identities=18% Similarity=0.087 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCC-c--ccCCCChhhHHHHHHH
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK-E--LNKSINPDEAVAYGAA 785 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~-~--v~~~~~p~~aVA~GAa 785 (840)
+++.+...+...|-..+...+ .++|.|++.||.+..+.+++.|++.+... + +....+-.+|.|.||.
T Consensus 271 a~d~~~~~la~~Ia~l~~~l~---g~pD~IV~gGGI~e~~~l~~~I~~~l~~~a~v~~~pg~~e~~ala~ga~ 340 (351)
T TIGR02707 271 ILDAMAYQIAKEIGKMAVVLK---GKVDAIVLTGGLAYSKYFVSEIIKRVSFIAPVLVYPGEDEMEALAEGAL 340 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEEcchhhcCHHHHHHHHHHHHhhCCEEEeCCcHHHHHHHHhHH
Confidence 444445555555544444421 14789999999999999999999887322 2 2333344568888876
No 143
>PRK05082 N-acetylmannosamine kinase; Provisional
Probab=36.55 E-value=1.1e+02 Score=32.90 Aligned_cols=49 Identities=22% Similarity=0.182 Sum_probs=32.9
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCC------CcccCCCChhhHHHHHHHHHHH
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNG------KELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~------~~v~~~~~p~~aVA~GAal~a~ 789 (840)
+++.|+|-|+.+..+.+.+.+++.+.. .++....-.+.+.+.|||.++.
T Consensus 233 dpe~IvlgG~~~~~~~~~~~i~~~l~~~~~~~~~~i~~s~~~~~~~~~GAa~~~~ 287 (291)
T PRK05082 233 DCQCVVLGGSVGLAEGYLELVQAYLAQEPAIYHVPLLAAHYRHDAGLLGAALWAQ 287 (291)
T ss_pred CCCEEEEcCccccHHHHHHHHHHHHHhcccccCCeEEECccCCchhhhhHHHHhc
Confidence 357899988887777766777766532 1233333456788999998763
No 144
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional
Probab=36.51 E-value=98 Score=33.42 Aligned_cols=48 Identities=23% Similarity=0.257 Sum_probs=31.1
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcCC--------CcccCCCChhhHHHHHHHHHH
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFNG--------KELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~~--------~~v~~~~~p~~aVA~GAal~a 788 (840)
+++.|+|-||.+..+.+.+.|++.+.. .++....-.+.+.+.|||.++
T Consensus 245 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 300 (303)
T PRK13310 245 DPHLVVLGGGLSNFDAIYEQLPKRLPRHLLPVARVPRIEKARHGDAGGVRGAAFLH 300 (303)
T ss_pred CCCEEEECCcccChHHHHHHHHHHHHHHhcccccCceEEEcccCchHHHHhHHHHh
Confidence 457788877777666666666665521 123333455678899999876
No 145
>COG5026 Hexokinase [Carbohydrate transport and metabolism]
Probab=34.51 E-value=4e+02 Score=30.34 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCC--cEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEe
Q psy7262 499 QATKDSGTIAGL--NVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 499 ~~l~~Aa~~AG~--~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~ 559 (840)
+.+.++.+.-++ ..+.++++.+++.++-.+.. .++++=|=+|.||--.....
T Consensus 185 ~~l~e~l~~r~~pi~v~aviNDttgtlla~~yt~---------~~~~iG~IfGTGtN~~y~e~ 238 (466)
T COG5026 185 RLLQEALSARNLPIRVVAVINDTTGTLLASVYTS---------SETIIGIIFGTGTNGCYCEP 238 (466)
T ss_pred HHHHHHHHhcCCceEEEEEecccHHHHHHHhhcC---------CCCeEEEEEecCccceEEee
Confidence 345555555454 56789999999977553322 34444455677766544443
No 146
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=33.13 E-value=42 Score=36.99 Aligned_cols=19 Identities=37% Similarity=0.861 Sum_probs=16.4
Q ss_pred ceEEEEEcCCceeEEEEEE
Q psy7262 604 RNVLIFDLGGGTFDVSILT 622 (840)
Q Consensus 604 ~~v~v~D~Gggt~d~s~~~ 622 (840)
..++++|+||||+|+++++
T Consensus 147 ~~~lVvDiGggttdvsvv~ 165 (336)
T PRK13928 147 SGNMVVDIGGGTTDIAVLS 165 (336)
T ss_pred CeEEEEEeCCCeEEEEEEE
Confidence 4589999999999999865
No 147
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=33.01 E-value=2.4e+02 Score=24.59 Aligned_cols=67 Identities=18% Similarity=0.254 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhhhH--HHHHHHHHHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHHHHHHHHHHHHHHhhCC
Q psy7262 104 EDIERMVNDAEKYKA--EDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQ 176 (840)
Q Consensus 104 eei~~~~~~~~~~~~--~D~~~~~~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~~~WLd~~~ 176 (840)
+++..++..++.+.. .+.-.....+++.++++.+..+|+.+.+ ....-++...+..+.+.++..+++
T Consensus 5 ~~l~~l~~d~~~l~~~~~~~~~~~~~~~r~~~~~~~~~a~~~~~~------~~~~~~~~~~~~~~~~~~~V~e~P 73 (94)
T PF05957_consen 5 AELEQLRADLEDLARSAADLAGEKADEARDRAEEALDDARDRAED------AADQAREQAREAAEQTEDYVRENP 73 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHCh
Confidence 455666666655542 2334455566666777777777666653 122344555566666666665554
No 148
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=32.51 E-value=1.6e+02 Score=23.57 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=27.1
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHcCCcEE
Q psy7262 484 NAVITVPAYFNDSQRQATKDSGTIAGLNVL 513 (840)
Q Consensus 484 ~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v 513 (840)
...++.|+.++..+|..+.+.|...|+..-
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a~~~gL~s~ 45 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLCRKLGLKSK 45 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHHHHcCCCce
Confidence 567899999999999999999999998763
No 149
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=31.74 E-value=1.9e+02 Score=23.19 Aligned_cols=31 Identities=13% Similarity=0.123 Sum_probs=27.7
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHcCCcEEE
Q psy7262 484 NAVITVPAYFNDSQRQATKDSGTIAGLNVLR 514 (840)
Q Consensus 484 ~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~ 514 (840)
.-.++.|+.++..+|..+.+.|+..|++..+
T Consensus 17 ~~~l~f~p~lt~~eR~~vH~~a~~~gL~s~S 47 (60)
T cd02640 17 IRDMVFSPEFSKEERALIHQIAQKYGLKSRS 47 (60)
T ss_pred cceEEcCCCCCHHHHHHHHHHHHHcCCceee
Confidence 5678999999999999999999999997643
No 150
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase). This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.
Probab=31.56 E-value=1.3e+02 Score=32.62 Aligned_cols=49 Identities=20% Similarity=0.167 Sum_probs=30.8
Q ss_pred CccEEEEEcCCCCc-HHHHHHHHhHcC---------CCcccCCCChhhHHHHHHHHHHH
Q psy7262 741 QIHDIVLVGGSTRI-PKVQKLLQDFFN---------GKELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 741 ~Id~V~LvGG~s~~-p~v~~~l~~~f~---------~~~v~~~~~p~~aVA~GAal~a~ 789 (840)
+.+.|+|-|+.+.. +++.+.+++.+. ..++....-...+++.|||.++.
T Consensus 251 dP~~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~Gaa~~~~ 309 (318)
T TIGR00744 251 NPSAIVLGGGLSDAGDLLLDPIRKSYKRWLFGGARQVADIIAAQLGNDAGLVGAADLAR 309 (318)
T ss_pred CCCEEEECChhhhCcHHHHHHHHHHHHHHhhhcccCCcEEEEcccCCchhhHHHHHHHH
Confidence 45778888876653 566666655541 11233444456788999998864
No 151
>PRK00180 acetate kinase A/propionate kinase 2; Reviewed
Probab=31.40 E-value=1.1e+02 Score=34.80 Aligned_cols=47 Identities=9% Similarity=0.037 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCC-CcHHHHHHHHhHc
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 765 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s-~~p~v~~~l~~~f 765 (840)
+++-++.++.+.|-....... ..+|.|+++||.+ ..+.|++.|.+.+
T Consensus 301 A~d~f~yri~k~Iga~~a~L~---g~vDaiVfTGGIgE~s~~lr~~I~~~l 348 (402)
T PRK00180 301 ALDVFVYRLAKYIGSYAAALN---GRLDAIVFTAGIGENSALVREKVLEGL 348 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---CCCCEEEEcCccccCCHHHHHHHHhhh
Confidence 444555566666655544431 3589999999999 9999999999987
No 152
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=28.80 E-value=1.2e+02 Score=30.04 Aligned_cols=57 Identities=16% Similarity=0.262 Sum_probs=36.9
Q ss_pred hHHHHHHHhhccchhhhccCCHHHHHHHHHHHHHHHHHHhhCC--cccHHHHHHHHHHHHHHHHHHHH
Q psy7262 134 ESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQ--LAEKEEFEHKQKELEAICNPIIT 199 (840)
Q Consensus 134 E~~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~~~WLd~~~--~a~~~~~~~kl~eL~~~~~~i~~ 199 (840)
++|+.++|..|+ .++++|++++ ++.+++++++.. -.+.+++.+++..=++++..+..
T Consensus 4 ~efL~~L~~~L~------~lp~~e~~e~---l~~Y~e~f~d~~~~G~sEeeii~~LG~P~~iA~~i~~ 62 (181)
T PF08006_consen 4 NEFLNELEKYLK------KLPEEEREEI---LEYYEEYFDDAGEEGKSEEEIIAELGSPKEIAREILA 62 (181)
T ss_pred HHHHHHHHHHHH------cCCHHHHHHH---HHHHHHHHHHhhhCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 345555555553 3677777665 666777775422 23577888888877877777764
No 153
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=27.95 E-value=62 Score=35.55 Aligned_cols=20 Identities=30% Similarity=0.782 Sum_probs=16.5
Q ss_pred CceEEEEEcCCceeEEEEEE
Q psy7262 603 ERNVLIFDLGGGTFDVSILT 622 (840)
Q Consensus 603 ~~~v~v~D~Gggt~d~s~~~ 622 (840)
...++++|+|+|++|+++++
T Consensus 147 ~~~~lvvDiGggttdvs~v~ 166 (334)
T PRK13927 147 PTGSMVVDIGGGTTEVAVIS 166 (334)
T ss_pred CCeEEEEEeCCCeEEEEEEe
Confidence 34589999999999999754
No 154
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=27.95 E-value=1.4e+02 Score=24.05 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=27.3
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHHHHcCCcEE
Q psy7262 483 SNAVITVPAYFNDSQRQATKDSGTIAGLNVL 513 (840)
Q Consensus 483 ~~vVitVPa~~~~~~r~~l~~Aa~~AG~~~v 513 (840)
..-.++.|+.+++.+|+.+...|...|+...
T Consensus 16 ~~~eL~Fp~~ls~~eRriih~la~~lGL~~~ 46 (60)
T cd02639 16 MRDELAFPSSLSPAERRIVHLLASRLGLNHV 46 (60)
T ss_pred CceEEEcCCCCCHHHHHHHHHHHHHcCCceE
Confidence 3667778999999999999999999999764
No 155
>KOG2708|consensus
Probab=27.93 E-value=7e+02 Score=25.86 Aligned_cols=75 Identities=13% Similarity=0.264 Sum_probs=45.2
Q ss_pred EEehHHHH-HHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHcCCCc-ccCCCChhhHHHHHH
Q psy7262 707 SITRARFE-ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE-LNKSINPDEAVAYGA 784 (840)
Q Consensus 707 ~itr~e~e-~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~-v~~~~~p~~aVA~GA 784 (840)
..+.+++- ++-+.++.-+.+.-++++...+ -+.|++|||-...-.+|+++..+..+.. .....|-..++-.|+
T Consensus 224 ~~t~~DLCySLQEtvFamLVEiTERAMAh~~-----s~evLIVGGVGCN~RLQeMM~~Mc~eRgg~~faTDeRfCIDNG~ 298 (336)
T KOG2708|consen 224 EVTKEDLCYSLQETVFAMLVEITERAMAHCG-----SKEVLIVGGVGCNERLQEMMAIMCSERGGKLFATDERFCIDNGV 298 (336)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCcEEEEecccccHHHHHHHHHHHHhcCCceEecccceeeeCch
Confidence 44555553 3334455555555566666544 3579999999999999999998873321 122234444555554
Q ss_pred HH
Q psy7262 785 AV 786 (840)
Q Consensus 785 al 786 (840)
.+
T Consensus 299 MI 300 (336)
T KOG2708|consen 299 MI 300 (336)
T ss_pred HH
Confidence 43
No 156
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=27.83 E-value=2.1e+02 Score=22.93 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=26.7
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHcCCcEEE
Q psy7262 485 AVITVPAYFNDSQRQATKDSGTIAGLNVLR 514 (840)
Q Consensus 485 vVitVPa~~~~~~r~~l~~Aa~~AG~~~v~ 514 (840)
..+..|+.++..+|..+.+.|+..|+...+
T Consensus 18 ~~l~F~p~ls~~eR~~vH~lA~~~gL~s~S 47 (60)
T cd02641 18 TELEFPPTLSSHDRLLVHELAEELGLRHES 47 (60)
T ss_pred CcEECCCCCCHHHHHHHHHHHHHcCCceEe
Confidence 678899999999999999999999987643
No 157
>COG4012 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.10 E-value=1.2e+02 Score=31.81 Aligned_cols=57 Identities=19% Similarity=0.348 Sum_probs=38.3
Q ss_pred eCCCCCHHHHHHHHHHHHH---cCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEe
Q psy7262 489 VPAYFNDSQRQATKDSGTI---AGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 489 VPa~~~~~~r~~l~~Aa~~---AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~ 559 (840)
+|-+|+ .|+.|+.. ++-. ..+++.-.||+..+..+.. ...+||||+|-|.+-.+++-
T Consensus 186 iPe~Ft-----RMraaa~sal~~~t~-av~mDskfaav~gal~dpa--------a~palvVd~GngHttaalvd 245 (342)
T COG4012 186 IPESFT-----RMRAAAMSALSAGTD-AVAMDSKFAAVMGALVDPA--------ADPALVVDYGNGHTTAALVD 245 (342)
T ss_pred CchhHH-----HHHHHHHHHHhcCce-EEEEcchhHhhhhcccCcc--------cCceEEEEccCCceEEEEec
Confidence 566665 34544433 3433 5677888888887766543 33789999999999877763
No 158
>PLN02377 3-ketoacyl-CoA synthase
Probab=26.77 E-value=1.8e+02 Score=34.06 Aligned_cols=54 Identities=6% Similarity=0.163 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEE-EcCCCCcHHHHHHHHhHcC
Q psy7262 713 FEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVL-VGGSTRIPKVQKLLQDFFN 766 (840)
Q Consensus 713 ~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~L-vGG~s~~p~v~~~l~~~f~ 766 (840)
++...++...-+.+.++++|+++++++++||.|++ +.+....|.+-..|.+.++
T Consensus 165 ~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LG 219 (502)
T PLN02377 165 MAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYK 219 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhC
Confidence 44444455555678889999999999999999877 4455568999999999994
No 159
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=26.32 E-value=73 Score=35.05 Aligned_cols=21 Identities=29% Similarity=0.789 Sum_probs=17.5
Q ss_pred CceEEEEEcCCceeEEEEEEE
Q psy7262 603 ERNVLIFDLGGGTFDVSILTI 623 (840)
Q Consensus 603 ~~~v~v~D~Gggt~d~s~~~~ 623 (840)
+..++++|+|+|++|+++++.
T Consensus 149 ~~~~lVvDiG~gttdvs~v~~ 169 (333)
T TIGR00904 149 PTGSMVVDIGGGTTEVAVISL 169 (333)
T ss_pred CceEEEEEcCCCeEEEEEEEe
Confidence 345899999999999998763
No 160
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=25.50 E-value=3.5e+02 Score=24.37 Aligned_cols=68 Identities=19% Similarity=0.289 Sum_probs=40.3
Q ss_pred CCcCc-ceEEEEEeccCCCceEEEEeecCCcCCccCCccceeEEEcCCCCCCCCCCeEEEEEEecC--CccEEEEE
Q psy7262 9 TTIPT-KQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDA--NGILNVTA 81 (840)
Q Consensus 9 t~lP~-~kt~~f~t~~d~q~~v~i~iyege~~~~~~n~~ig~~~i~gi~~~~~G~~~I~vtf~ld~--nGil~V~a 81 (840)
+.=|. ..+..|.-..+....+.|.+|.-+.. .+..||+..+. +..-..|. .+...|.+.. .|.|+++-
T Consensus 45 t~nP~Wne~f~f~i~~~~~~~l~v~v~d~d~~---~~~~iG~~~~~-l~~l~~g~-~~~~~~~L~~~~~g~l~~~~ 115 (119)
T cd04036 45 SINPVWNETFEFRIQSQVKNVLELTVMDEDYV---MDDHLGTVLFD-VSKLKLGE-KVRVTFSLNPQGKEELEVEF 115 (119)
T ss_pred CCCCccceEEEEEeCcccCCEEEEEEEECCCC---CCcccEEEEEE-HHHCCCCC-cEEEEEECCCCCCceEEEEE
Confidence 33444 23344433333344578888876543 56689999885 44444453 3777777776 47777653
No 161
>PRK09557 fructokinase; Reviewed
Probab=25.50 E-value=2e+02 Score=31.06 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=29.7
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHcC--------CCcccCCCChhhHHHHHHHHHH
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFFN--------GKELNKSINPDEAVAYGAAVQA 788 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f~--------~~~v~~~~~p~~aVA~GAal~a 788 (840)
+++.|+|-||.+..+.+.+.+++.+. ..++....-...+.++||++..
T Consensus 244 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 299 (301)
T PRK09557 244 DPDVIVLGGGMSNVDRLYPTLPALLKQYVFGGECETPVRKALHGDSSGVRGAAWLW 299 (301)
T ss_pred CCCEEEEcCcccchHHHHHHHHHHHHHHhcccccCCeEEEcccCCchhhhhhhHhh
Confidence 35778888888777766555555441 1123333344568899999754
No 162
>KOG1939|consensus
Probab=25.31 E-value=1.1e+02 Score=37.11 Aligned_cols=23 Identities=13% Similarity=-0.119 Sum_probs=19.3
Q ss_pred cccccCCCcccc-ccceEEEEEEE
Q psy7262 330 HFTNFIPSHPVS-FITSALQGVFQ 352 (840)
Q Consensus 330 ~~~~~~~~~gID-GtT~s~va~~~ 352 (840)
...+..|+||+| ||||+-|+-+.
T Consensus 300 ~~~~~~P~IGFDMGGTSTDVsRY~ 323 (1247)
T KOG1939|consen 300 DAEDKKPLIGFDMGGTSTDVSRYD 323 (1247)
T ss_pred ccccCCceeeecCCCCccceeccC
Confidence 446788999999 99999997775
No 163
>PRK09698 D-allose kinase; Provisional
Probab=25.24 E-value=1.9e+02 Score=31.17 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=31.5
Q ss_pred CccEEEEEcCCCCc-----HHHHHHHHhHcC------CCcccCCCChhhHHHHHHHHHHH
Q psy7262 741 QIHDIVLVGGSTRI-----PKVQKLLQDFFN------GKELNKSINPDEAVAYGAAVQAA 789 (840)
Q Consensus 741 ~Id~V~LvGG~s~~-----p~v~~~l~~~f~------~~~v~~~~~p~~aVA~GAal~a~ 789 (840)
+++.|+|-||.+.. +.+++.+++... ..++......+.+.+.|||+++.
T Consensus 236 dP~~IvlgG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 295 (302)
T PRK09698 236 DPDAIILGGGVMDMPAFPRETLIAMIQKYLRKPLPYEVVRFIYASSSDFNGAQGAAILAH 295 (302)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHHHHccCccccCCcEEEECCcCCcccHHhHHHHHH
Confidence 45788888887764 346666666541 12344444566788999998874
No 164
>COG4012 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.12 E-value=55 Score=34.30 Aligned_cols=18 Identities=33% Similarity=0.564 Sum_probs=15.8
Q ss_pred eEEEEecCCCceEEEEEe
Q psy7262 542 NVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 542 ~vLVvDiGGGTtDis~~~ 559 (840)
.+|++|+|.||.|+-.+.
T Consensus 2 kila~DvG~GTqDi~~~d 19 (342)
T COG4012 2 KILAIDVGVGTQDIVAYD 19 (342)
T ss_pred ceEEEEecCCceeEEEec
Confidence 379999999999998874
No 165
>PRK07058 acetate kinase; Provisional
Probab=25.03 E-value=1.6e+02 Score=33.21 Aligned_cols=47 Identities=9% Similarity=0.106 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCC-CcHHHHHHHHhHc
Q psy7262 715 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 765 (840)
Q Consensus 715 ~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s-~~p~v~~~l~~~f 765 (840)
.+++-++.++.+.|-...... ..+|.|+++||-+ ..+.||+.|.+.+
T Consensus 296 lA~d~f~yri~k~IGa~~a~L----g~vDaiVfTGGIgEns~~vr~~i~~~l 343 (396)
T PRK07058 296 EALDLFALRIAGEIARLAATL----GGLDAVVFTAGIGEHQPAIRAAVCERL 343 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhh
Confidence 345556666666666555544 2589999999999 9999999999887
No 166
>TIGR00016 ackA acetate kinase. Acetate kinase is involved in the activation of acetate to acetyl CoA and in the secretion of acetate. It catalyzes the reaction ATP + acetate = ADP + acetyl phosphate. Some members of this family have been shown to act on propionate as well as acetate. An example of a propionate/acetate kinase is TdcD of E. coli, an enzyme of an anaerobic pathway of threonine catabolism. It is not known how many members of this family act on additional substrates besides acetate.
Probab=24.68 E-value=1.7e+02 Score=33.09 Aligned_cols=47 Identities=13% Similarity=0.205 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCC-CcHHHHHHHHhHc
Q psy7262 716 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 765 (840)
Q Consensus 716 ~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s-~~p~v~~~l~~~f 765 (840)
+++-++.++.+.|-......+ ..+|.|+++||.+ .++.||+.|.+.+
T Consensus 305 A~~~f~yri~k~Iga~~a~L~---G~vDaiVFTGGIGEns~~vr~~i~~~l 352 (404)
T TIGR00016 305 AIKMYVHRIAKYIGSYIASLE---GNLDAIVFTGGIGENAATVRELVLEAL 352 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEEcCccccCCHHHHHHHHhhh
Confidence 344455555555555444432 2489999999999 9999999999987
No 167
>PF13941 MutL: MutL protein
Probab=24.34 E-value=34 Score=39.33 Aligned_cols=27 Identities=22% Similarity=0.411 Sum_probs=21.8
Q ss_pred ccCccEEEEEcC-CCCcHHHHHHHHhHc
Q psy7262 739 KAQIHDIVLVGG-STRIPKVQKLLQDFF 765 (840)
Q Consensus 739 ~~~Id~V~LvGG-~s~~p~v~~~l~~~f 765 (840)
...++.|+-+|| .++.|.-.+.|+..+
T Consensus 383 L~~v~~iIgtGGvL~h~~~~~~il~~~~ 410 (457)
T PF13941_consen 383 LTRVKYIIGTGGVLTHSPNPEEILKAAL 410 (457)
T ss_pred cccCCEEEEeCccccCCCCHHHHHHHHh
Confidence 346899999999 788888777777776
No 168
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=23.98 E-value=4.2e+02 Score=29.55 Aligned_cols=53 Identities=23% Similarity=0.278 Sum_probs=40.7
Q ss_pred ccCccEEEEEcCCCCcHHHHHHHHhHcCCCcccC----CCChhhHHHHHHHHHHHHH
Q psy7262 739 KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK----SINPDEAVAYGAAVQAAIL 791 (840)
Q Consensus 739 ~~~Id~V~LvGG~s~~p~v~~~l~~~f~~~~v~~----~~~p~~aVA~GAal~a~~l 791 (840)
....+.++++||+.+.|++.+.|...+++..|.. ..+++..=|.+-|++|...
T Consensus 288 ~~~p~~l~vcGGG~~N~llm~rLa~l~~g~~V~~t~~~g~~gd~~EA~afA~LA~r~ 344 (371)
T COG2377 288 QGDPRRLVVCGGGRRNPLLMARLAALLEGVEVATTDEAGLDGDAVEAEAFAWLAWRT 344 (371)
T ss_pred cCCCceeEeecCCccCHHHHHHHHHhcCCCeeeechhcCCCcchhhHHHHHHHHHHH
Confidence 4467889999999999999999999998765542 3466666667777777544
No 169
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=23.49 E-value=1.6e+02 Score=31.64 Aligned_cols=43 Identities=12% Similarity=0.210 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCCccCccEEEE-EcCCCCcHHHHHHHHhHc
Q psy7262 723 GTMEPVEKSLRDAKMDKAQIHDIVL-VGGSTRIPKVQKLLQDFF 765 (840)
Q Consensus 723 ~i~~~i~~~l~~a~~~~~~Id~V~L-vGG~s~~p~v~~~l~~~f 765 (840)
-+...|+++|+++++++.+||.++. +..++-.|.+-.+|.+.|
T Consensus 86 v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~ 129 (290)
T PF08392_consen 86 VIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRY 129 (290)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHh
Confidence 4567888999999999999998654 677899999999999999
No 170
>PRK14878 UGMP family protein; Provisional
Probab=23.45 E-value=99 Score=33.99 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=22.6
Q ss_pred CccEEEEEcCCCCcHHHHHHHHhHc
Q psy7262 741 QIHDIVLVGGSTRIPKVQKLLQDFF 765 (840)
Q Consensus 741 ~Id~V~LvGG~s~~p~v~~~l~~~f 765 (840)
.+..|+|+||-+...++++.+.+.+
T Consensus 241 g~~~vvlsGGVa~N~~L~~~l~~~~ 265 (323)
T PRK14878 241 GKKEVLLVGGVAANRRLREKLEIMA 265 (323)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHH
Confidence 3678999999999999999999876
No 171
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=23.05 E-value=39 Score=38.63 Aligned_cols=44 Identities=14% Similarity=0.181 Sum_probs=26.7
Q ss_pred HcCCCccCccEEEEEcC-CCCcH--HHHHHHHh-Hc--CCCcccCCCChh
Q psy7262 734 DAKMDKAQIHDIVLVGG-STRIP--KVQKLLQD-FF--NGKELNKSINPD 777 (840)
Q Consensus 734 ~a~~~~~~Id~V~LvGG-~s~~p--~v~~~l~~-~f--~~~~v~~~~~p~ 777 (840)
+.|.+...++.|+-+|| .++.| .....++. .| ++..+..+.+|.
T Consensus 382 q~GkDL~~v~~vigtGGvL~ha~~~~~~~il~~~~~~~~~~~~L~p~~~~ 431 (463)
T TIGR01319 382 QIGKDLLNVKCVIGSGGVLSHASQFDMGEILKAGEFDDADARHLKPQEFE 431 (463)
T ss_pred ccCCCchhCcEEEEeCcceeCCCCcCHHHHHhhhhccCCCccccCCcCCe
Confidence 33445567899999999 67777 66666644 23 233344454444
No 172
>PLN03170 chalcone synthase; Provisional
Probab=23.03 E-value=2.6e+02 Score=31.81 Aligned_cols=49 Identities=14% Similarity=0.218 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCC-CcHHHHHHHHhHcCC
Q psy7262 719 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFFNG 767 (840)
Q Consensus 719 ~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s-~~p~v~~~l~~~f~~ 767 (840)
...+-..+..+++|+++++.+++||.|+++-.+. ..|.+--.|.+.++-
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl 154 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGL 154 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCc
Confidence 3444556788999999999999999988766443 699999999999843
No 173
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1.97.1.4 from EC) in UniProt. It is not clear where this annotation comes from.
Probab=22.42 E-value=1.5e+02 Score=31.20 Aligned_cols=69 Identities=22% Similarity=0.366 Sum_probs=45.4
Q ss_pred ceEEE--eeCCCCCHHHHHHHHHHHHHcCCcEEEeecchHHHHHHhhcccccCCCCCCCCceEEEEecCCCceEEEEEe
Q psy7262 483 SNAVI--TVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAGSGERNVLIFDLGGGTFDVSILT 559 (840)
Q Consensus 483 ~~vVi--tVPa~~~~~~r~~l~~Aa~~AG~~~v~~v~Ep~AAAl~y~~~~~~~~~~~~~~~~vLVvDiGGGTtDis~~~ 559 (840)
..++. .+|.+|+. -+++++++...|.+. .+++-..||.+....+... ...+.+++||+|-|.|=..+++
T Consensus 115 ~~~~y~~~~P~~~TR--m~av~~~~~~~~~~~-~vmDTg~AAvlGal~d~~v-----~~~~~~~~vniGN~HTlaa~v~ 185 (254)
T PF08735_consen 115 ESFVYADDPPPYFTR--MRAVRESLGGAGYDE-VVMDTGPAAVLGALCDPEV-----SSREGIIVVNIGNGHTLAALVK 185 (254)
T ss_pred HHeeecCCCcHHHHH--HHHHHHHhccCCCCc-eEecCHHHHHhhhhcChhh-----hccCCeEEEEeCCccEEEEEEe
Confidence 56666 78888662 234555555555555 5666666666666544332 3567899999999988777774
No 174
>PF09921 DUF2153: Uncharacterized protein conserved in archaea (DUF2153); InterPro: IPR014450 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.83 E-value=6.5e+02 Score=23.40 Aligned_cols=102 Identities=11% Similarity=0.128 Sum_probs=59.3
Q ss_pred HHHHHHHHhhhHHHHHHHH--HHHHhhhhhHHHHHHHhhccchhhhccCCHHHHHHHHHHHHHHHHHHhhCCcccHHHHH
Q psy7262 107 ERMVNDAEKYKAEDEKQKA--VISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFE 184 (840)
Q Consensus 107 ~~~~~~~~~~~~~D~~~~~--~~eakn~LE~~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~~~WLd~~~~a~~~~~~ 184 (840)
+...+..+.+...|+..-. ...|-+=....|.+.-+.|.++-+...+|.+...++.+.+-++..=|=+-+..-+++|.
T Consensus 14 ~~~~~~e~~~~~~DRL~LIl~sr~afqhm~RTlKaFd~WLqdP~ItshMPreML~dv~~~~~~il~~llelDI~HTS~~r 93 (126)
T PF09921_consen 14 ETFKKHEKNVESADRLDLILSSRAAFQHMMRTLKAFDQWLQDPMITSHMPREMLEDVWETLREILEQLLELDIRHTSQFR 93 (126)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhcCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3344444555555654332 22333334445556667777777778888888888888888777655223333356677
Q ss_pred HHHHHHHHH--HHHHHHHHhccCCCC
Q psy7262 185 HKQKELEAI--CNPIITKLYQGSGGA 208 (840)
Q Consensus 185 ~kl~eL~~~--~~~i~~r~~~~~~~~ 208 (840)
+-+..|.+- .+|+.....+.++..
T Consensus 94 dll~kl~kEGkl~pll~~~~~~~~~~ 119 (126)
T PF09921_consen 94 DLLKKLAKEGKLNPLLWLYKQQGEQK 119 (126)
T ss_pred HHHHHHHHcCCCCHHHHhhccccCCC
Confidence 666666643 347766544433333
No 175
>PLN03173 chalcone synthase; Provisional
Probab=21.74 E-value=2.7e+02 Score=31.49 Aligned_cols=48 Identities=17% Similarity=0.269 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCccEEEEEcCCC-CcHHHHHHHHhHcC
Q psy7262 719 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFFN 766 (840)
Q Consensus 719 ~~i~~i~~~i~~~l~~a~~~~~~Id~V~LvGG~s-~~p~v~~~l~~~f~ 766 (840)
...+=..+.++++|+++++++.+||.|+++.... ..|.+--.|.+.++
T Consensus 101 ~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LG 149 (391)
T PLN03173 101 EVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLG 149 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhC
Confidence 3344456778899999999999999988776444 58999999999984
No 176
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=21.61 E-value=74 Score=34.66 Aligned_cols=37 Identities=24% Similarity=0.551 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHcCCCccCccEEEEEcCCCCcHHHHHHHHhHc
Q psy7262 724 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 765 (840)
Q Consensus 724 i~~~i~~~l~~a~~~~~~Id~V~LvGG~s~~p~v~~~l~~~f 765 (840)
+.+.++.++++. .++.|+|.||-+...++++.|.+.+
T Consensus 246 l~~~~~~~~~~~-----g~~~vvlsGGVa~N~~L~~~l~~~~ 282 (305)
T TIGR00329 246 LIEKTKRALKDT-----GPKELVLVGGVSANKRLREMLETLC 282 (305)
T ss_pred HHHHHHHHHHHc-----CCCEEEEECCHHHHHHHHHHHHHHH
Confidence 334444444442 4678999999999999999999887
No 177
>TIGR01069 mutS2 MutS2 family protein. Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function.
Probab=21.48 E-value=8.2e+02 Score=30.47 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHHHhhh-HHHHHHHHHHHHhhhhhHHHHHHHhh
Q psy7262 100 RLSKEDIERMVNDAEKYK-AEDEKQKAVISAKNSLESYCFNMKST 143 (840)
Q Consensus 100 ~ls~eei~~~~~~~~~~~-~~D~~~~~~~eakn~LE~~iy~~r~~ 143 (840)
.++++-++++.+...... .-++...++.+.+.++|....+++..
T Consensus 493 Glp~~ii~~A~~~~~~~~~~~~~li~~L~~~~~~~e~~~~~~~~~ 537 (771)
T TIGR01069 493 GIPHFIIEQAKTFYGEFKEEINVLIEKLSALEKELEQKNEHLEKL 537 (771)
T ss_pred CcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 377776766666544333 23333444444444455444443333
No 178
>PF02970 TBCA: Tubulin binding cofactor A; InterPro: IPR004226 The folding pathway of tubulins includes highly specific interactions with a series of cofactors (A, B, C, D and E) after they are released from the eukaryotic chaperonin CCT. Cofactors A and D capture and stabilise tubulin in a quasi-native conformation. Cofactor E binds to the cofactor D-tubulin complex, and interaction with cofactor C then causes the release of tubulin poypeptides in the native state. This family is the tubulin-specific chaperone A.; GO: 0051082 unfolded protein binding, 0007021 tubulin complex assembly, 0005874 microtubule; PDB: 3MXZ_A 1QSD_A 1H7C_A.
Probab=21.06 E-value=3.8e+02 Score=23.40 Aligned_cols=22 Identities=9% Similarity=0.223 Sum_probs=17.6
Q ss_pred cCCHHHHHHHHHHHHHHHHHHh
Q psy7262 152 KISDAERTQILDKCNDVIKWLD 173 (840)
Q Consensus 152 ~~~~~e~~~l~~~l~e~~~WLd 173 (840)
.+-|+-+.++.+++.++++||+
T Consensus 55 ~mipd~~~RL~~a~~~L~~~l~ 76 (90)
T PF02970_consen 55 MMIPDCQQRLEKAVEDLEEFLE 76 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHH
Confidence 3446778889999999999994
No 179
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=20.85 E-value=1e+02 Score=34.05 Aligned_cols=20 Identities=35% Similarity=0.718 Sum_probs=16.8
Q ss_pred CceEEEEEcCCceeEEEEEE
Q psy7262 603 ERNVLIFDLGGGTFDVSILT 622 (840)
Q Consensus 603 ~~~v~v~D~Gggt~d~s~~~ 622 (840)
+..++++|+|+|++|++++.
T Consensus 149 ~~~~lvvDiG~gtt~v~vi~ 168 (335)
T PRK13929 149 PVANVVVDIGGGTTEVAIIS 168 (335)
T ss_pred CceEEEEEeCCCeEEEEEEE
Confidence 44589999999999999854
No 180
>KOG2196|consensus
Probab=20.78 E-value=7.5e+02 Score=25.81 Aligned_cols=38 Identities=24% Similarity=0.477 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHH
Q psy7262 154 SDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICN 195 (840)
Q Consensus 154 ~~~e~~~l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~~~~ 195 (840)
+..+..++....-+.+.||+++. ..++++++++.++++
T Consensus 213 ~~~qi~Kilnah~~sLqwl~d~s----t~~e~k~d~i~K~~~ 250 (254)
T KOG2196|consen 213 PIIQIEKILNAHMDSLQWLDDNS----TQLEKKLDKIKKLKD 250 (254)
T ss_pred chHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHhhhc
Confidence 35667888888888999998764 467888888888765
No 181
>PF15188 CCDC-167: Coiled-coil domain-containing protein 167
Probab=20.43 E-value=5.6e+02 Score=22.23 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=26.2
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHhhCCcccHHHHHHHHHHHHH
Q psy7262 150 KDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEA 192 (840)
Q Consensus 150 ~~~~~~~e~~~l~~~l~e~~~WLd~~~~a~~~~~~~kl~eL~~ 192 (840)
...+++++|..+.+.+..+.+-|.. ++++|..|++
T Consensus 30 ~~eLs~e~R~~lE~E~~~l~~~l~~--------~E~eL~~Lrk 64 (85)
T PF15188_consen 30 RRELSPEARRSLEKELNELKEKLEN--------NEKELKLLRK 64 (85)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhhc--------cHHHHHHHHH
Confidence 3678999999999888888776653 4566666664
No 182
>PRK00039 ruvC Holliday junction resolvase; Reviewed
Probab=20.36 E-value=54 Score=32.19 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=15.3
Q ss_pred CCCcccc-ccceEEEEEEE
Q psy7262 335 IPSHPVS-FITSALQGVFQ 352 (840)
Q Consensus 335 ~~~~gID-GtT~s~va~~~ 352 (840)
+.++||| |+++++.++.+
T Consensus 2 m~iLGIDPgl~~tG~avi~ 20 (164)
T PRK00039 2 MRILGIDPGLRRTGYGVIE 20 (164)
T ss_pred CEEEEEccccCceeEEEEE
Confidence 3578999 99999999874
No 183
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=20.24 E-value=6.3e+02 Score=22.77 Aligned_cols=19 Identities=11% Similarity=0.050 Sum_probs=8.5
Q ss_pred HHHHhhhhhHHHHHHHhhc
Q psy7262 126 VISAKNSLESYCFNMKSTV 144 (840)
Q Consensus 126 ~~eakn~LE~~iy~~r~~l 144 (840)
..++|.++++.+.+.|+++
T Consensus 39 ~~~lR~r~~~~Lk~~r~rl 57 (104)
T COG4575 39 AEELRSKAESALKEARDRL 57 (104)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444
No 184
>PLN02854 3-ketoacyl-CoA synthase
Probab=20.19 E-value=1.7e+02 Score=34.47 Aligned_cols=54 Identities=9% Similarity=0.191 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEE-EcCCCCcHHHHHHHHhHcC
Q psy7262 713 FEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVL-VGGSTRIPKVQKLLQDFFN 766 (840)
Q Consensus 713 ~e~~~~~~i~~i~~~i~~~l~~a~~~~~~Id~V~L-vGG~s~~p~v~~~l~~~f~ 766 (840)
+++..++.-.-+...++++|+++++++++||.|++ +.+....|.+-..|.+.++
T Consensus 181 ~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LG 235 (521)
T PLN02854 181 MEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYK 235 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhC
Confidence 33333333344667888899999999999999887 4455568999999999994
Done!