Query psy7264
Match_columns 206
No_of_seqs 126 out of 1129
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 22:14:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h1d_A E3 ubiquitin-protein li 100.0 5.9E-52 2E-56 374.4 16.8 168 2-206 231-405 (405)
2 1zvd_A SMAD ubiquitination reg 100.0 1.2E-50 4E-55 363.6 16.8 166 2-205 207-379 (380)
3 1nd7_A WW domain-containing pr 100.0 4.3E-50 1.5E-54 359.3 17.4 161 2-172 207-373 (374)
4 3olm_A E3 ubiquitin-protein li 100.0 1.3E-49 4.5E-54 361.6 16.5 166 2-205 257-428 (429)
5 1c4z_A E6AP, ubiquitin-protein 100.0 3.7E-50 1.3E-54 358.0 12.6 165 2-206 190-358 (358)
6 2oni_A E3 ubiquitin-protein li 100.0 2.9E-49 1E-53 355.8 16.1 160 2-171 226-392 (392)
7 3pt3_A E3 ubiquitin-protein li 100.0 1.6E-40 5.6E-45 253.0 9.1 110 66-206 2-118 (118)
8 1nd7_A WW domain-containing pr 78.7 1 3.4E-05 39.6 2.5 25 175-199 349-373 (374)
9 2oni_A E3 ubiquitin-protein li 63.8 2.5 8.5E-05 37.4 1.5 24 175-198 369-392 (392)
10 3lfp_A CSP231I C protein; tran 52.4 26 0.00088 23.6 5.0 60 53-113 26-94 (98)
11 3ivp_A Putative transposon-rel 47.3 29 0.001 24.5 4.8 61 53-113 37-108 (126)
12 1l6x_B Minimized B-domain of p 45.1 19 0.00066 20.5 2.7 21 89-109 6-28 (34)
13 1zda_A Mini protein A domain, 34.1 20 0.00068 21.0 1.6 20 90-109 12-33 (38)
14 2kzi_A Engineered protein, ZHE 33.5 19 0.00066 23.9 1.6 19 91-109 24-44 (70)
15 1b0n_A Protein (SINR protein); 29.5 1.2E+02 0.0041 20.3 5.5 60 53-112 26-103 (111)
16 1deq_A Fibrinogen (alpha chain 28.8 31 0.001 30.4 2.6 34 164-197 152-193 (390)
17 3op9_A PLI0006 protein; struct 27.3 82 0.0028 21.5 4.4 60 53-112 34-106 (114)
18 2lr2_A Immunoglobulin G-bindin 25.5 43 0.0015 22.8 2.3 30 86-115 20-51 (88)
19 3mkb_A Hemoglobin subunit alph 21.3 82 0.0028 23.1 3.5 58 140-198 36-111 (140)
20 2jtt_C Calcyclin-binding prote 20.3 55 0.0019 18.8 1.8 31 84-114 4-34 (35)
No 1
>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A
Probab=100.00 E-value=5.9e-52 Score=374.35 Aligned_cols=168 Identities=40% Similarity=0.670 Sum_probs=152.4
Q ss_pred CchHHHHHHHHHhhcCCCCCCCcceeeccchhHH-HHHHHHhhcCCchhccCCCHHHHHHHHcCCCCCcHHHHHhhceec
Q psy7264 2 SERHVSYVAYLIHMNGTPLSRPRKVIVNLCPKQV-IIREYFLKFIPKKLVSYRLSPSTKLLLCGTSDYSIADLLAHHVVA 80 (206)
Q Consensus 2 ~~~~~~Yv~~~~~~~~~~~~~~~~v~~~~~~kq~-A~r~GF~~Vip~~~l~~fs~~EL~~lvcG~~~i~~e~l~~~~~y~ 80 (206)
++|+.+||+++++++ +...+.+|. ||++||++|+|.+++++|+|+||+.++||.++||+++|++++.|.
T Consensus 231 ~~Nk~eYV~l~~~~~----------l~~~v~~q~~aF~~Gf~~Vip~~~L~lF~~~ELe~Li~G~~~id~~dl~~~t~y~ 300 (405)
T 3h1d_A 231 EENKKEYVHLVCQMR----------MTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYH 300 (405)
T ss_dssp TTTHHHHHHHHHHHH----------HTGGGHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHCCCCCCHHHHHHTEEEE
T ss_pred hHhHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHhhHHHHhCCCHHHHHHHhCCCCCCCHHHHHhhCccc
Confidence 579999999999999 888889998 899999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHhhCCHHHHHhhhhhccCCCCCCCCCCCCCC-----CceeEeccC-CCCCCceeccccCeeecCC
Q psy7264 81 SSFPHPKLLQWFWTALQNFTTEERARLLQFTTGSSQLPPGGFAQLK-----PKFSISYIQ-AHNSLPVAHTCSNQLCLPT 154 (206)
Q Consensus 81 g~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TGs~rlP~~g~~~~~-----~~i~i~~~~-~~~~LP~A~TCf~~L~LP~ 154 (206)
|++++|++|+|||+++++||++||++||+|+|||+|+|++||+.+. ++|+|...+ ++++||+||||||+|+||+
T Consensus 301 gy~~~~~~i~~FW~v~~~~s~eer~~fL~FvTGs~rlP~~Gf~~L~~~~~~~~f~i~~~~~~~~~LP~a~TCfn~L~LP~ 380 (405)
T 3h1d_A 301 KYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPA 380 (405)
T ss_dssp SSCTTCHHHHHHHHHHHHSCHHHHHHHHHHHHSSSCCCTTCGGGCBCSSSBCCEEEEEECSCTTSCCEEEGGGTEEEEEC
T ss_pred CCCCCCchHhhHHHHHHhCCHHHHHHHHHHHcCCCCCCCCccccccccCCCceEEEeeCCCCCCCCccceeccCEeECCC
Confidence 9999999999999999999999999999999999999999999886 378888654 6789999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhhhcccCCCCcchHHHHHHHHHHHHhcCCcccccC
Q psy7264 155 YDNYEKFEKALITAIKALSSNQLCLPTYDNYEKFEKALITAINEGSEGFGLA 206 (206)
Q Consensus 155 Yss~e~l~ekL~~AI~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~~~gf~~~ 206 (206)
|+|+|+ |++||.+||++|++|||||
T Consensus 381 Yss~e~---------------------------l~ekL~~AI~e~~~GFgla 405 (405)
T 3h1d_A 381 YESFEK---------------------------LRHMLLLAIQEASEGFGLA 405 (405)
T ss_dssp CSSHHH---------------------------HHHHHHHHHHC--------
T ss_pred CCCHHH---------------------------HHHHHHHHHHhCCCCcCCC
Confidence 999999 9999999999999999997
No 2
>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=363.64 Aligned_cols=166 Identities=34% Similarity=0.623 Sum_probs=151.7
Q ss_pred CchHHHHHHHHHhhcCCCCCCCcceeeccchhHH-HHHHHHhhcCCchhccCCCHHHHHHHHcCCCCCcHHHHHhhceec
Q psy7264 2 SERHVSYVAYLIHMNGTPLSRPRKVIVNLCPKQV-IIREYFLKFIPKKLVSYRLSPSTKLLLCGTSDYSIADLLAHHVVA 80 (206)
Q Consensus 2 ~~~~~~Yv~~~~~~~~~~~~~~~~v~~~~~~kq~-A~r~GF~~Vip~~~l~~fs~~EL~~lvcG~~~i~~e~l~~~~~y~ 80 (206)
++|+.+||+++++++ +...+.+|. ||++||.+|+|.+++++|+|+||+.++||.++||+++|+++|.|.
T Consensus 207 ~~N~~eYv~l~~~~~----------l~~~i~~q~~af~~Gf~~vip~~~L~~F~~~ELe~li~G~~~id~~dl~~~t~y~ 276 (380)
T 1zvd_A 207 EENKKEYVRLYVNWR----------FLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLK 276 (380)
T ss_dssp TTTHHHHHHHHHHHH----------HTTTTHHHHHHHHHHHHHHSCGGGGTTCCHHHHHHHHHCBSSCCHHHHHHTEEEE
T ss_pred cccHHHHHHHHHHHH----------HHHhHHHHHHHHHHhHHHHhHHHHHhCCCHHHHHHhhCCCCCCChhhhhhccEec
Confidence 479999999999999 888888888 899999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHhhCCHHHHHhhhhhccCCCCCCCCCCCCCCC-----ceeEec-cCCCCCCceeccccCeeecCC
Q psy7264 81 SSFPHPKLLQWFWTALQNFTTEERARLLQFTTGSSQLPPGGFAQLKP-----KFSISY-IQAHNSLPVAHTCSNQLCLPT 154 (206)
Q Consensus 81 g~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TGs~rlP~~g~~~~~~-----~i~i~~-~~~~~~LP~A~TCf~~L~LP~ 154 (206)
|+++++++|+|||+++++||++||++||+|+|||+|+|++||+++.+ +|+|+. .+++++||+||||||+|+||+
T Consensus 277 gy~~~~~~i~~FW~vv~~~s~eer~~fL~FvTGs~rlP~~Gf~~L~~~~gp~~f~I~~~~~~~~~LP~a~TCfn~L~LP~ 356 (380)
T 1zvd_A 277 HCTPDSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPP 356 (380)
T ss_dssp SSCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSSBCTTCGGGCEETTEECCEEEEECCCCTTSCCEEEGGGTEEEECC
T ss_pred CCCCCcchhhhHHHHHHhCCHHHHHHHHHHHhCCCCCCCcchhhccccCCCCceEEEecCCCCCCCCEEecCcCEEECCC
Confidence 99999999999999999999999999999999999999999999863 688884 457889999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhhhcccCCCCcchHHHHHHHHHHHHhcCCccccc
Q psy7264 155 YDNYEKFEKALITAIKALSSNQLCLPTYDNYEKFEKALITAINEGSEGFGL 205 (206)
Q Consensus 155 Yss~e~l~ekL~~AI~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~~~gf~~ 205 (206)
|+|+|+ |++||.+||++ ++|||+
T Consensus 357 Y~s~e~---------------------------l~~kL~~AI~~-~~GF~l 379 (380)
T 1zvd_A 357 YESYEK---------------------------LYEKLLTAIEE-TCGFAV 379 (380)
T ss_dssp CSSHHH---------------------------HHHHHHHHHCC-------
T ss_pred CCCHHH---------------------------HHHHHHHHHHh-CCCcCc
Confidence 999999 99999999998 589997
No 3
>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A
Probab=100.00 E-value=4.3e-50 Score=359.35 Aligned_cols=161 Identities=31% Similarity=0.563 Sum_probs=153.0
Q ss_pred CchHHHHHHHHHhhcCCCCCCCcceeeccchhHH-HHHHHHhhcCCchhccCCCHHHHHHHHcCCCCCcHHHHHhhceec
Q psy7264 2 SERHVSYVAYLIHMNGTPLSRPRKVIVNLCPKQV-IIREYFLKFIPKKLVSYRLSPSTKLLLCGTSDYSIADLLAHHVVA 80 (206)
Q Consensus 2 ~~~~~~Yv~~~~~~~~~~~~~~~~v~~~~~~kq~-A~r~GF~~Vip~~~l~~fs~~EL~~lvcG~~~i~~e~l~~~~~y~ 80 (206)
++|+.+||+++++++ +...+.+|. ||++||.+|+|.+++++|+|+||+.++||.++||+++|+++|.|.
T Consensus 207 ~~N~~eYv~l~~~~~----------l~~~i~~q~~af~~Gf~~vip~~~L~~F~~~ELe~li~G~~~id~~dl~~~t~y~ 276 (374)
T 1nd7_A 207 EENKDEYIGLMTEWR----------FSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYR 276 (374)
T ss_dssp TTTHHHHHHHHHHHH----------HHTTTHHHHHHHHHHHHHHSCGGGGTTCCHHHHHHHHHCCCCCCHHHHHHTEEEE
T ss_pred cccHHHHHHHHHHHH----------HhccHHHHHHHHHHhhhhhCCHHHHhcCCHHHHHHHhcCCCCCCHHHHhhheEEc
Confidence 479999999999999 888888898 899999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHhhCCHHHHHhhhhhccCCCCCCCCCCCCCC-----CceeEeccCCCCCCceeccccCeeecCCC
Q psy7264 81 SSFPHPKLLQWFWTALQNFTTEERARLLQFTTGSSQLPPGGFAQLK-----PKFSISYIQAHNSLPVAHTCSNQLCLPTY 155 (206)
Q Consensus 81 g~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TGs~rlP~~g~~~~~-----~~i~i~~~~~~~~LP~A~TCf~~L~LP~Y 155 (206)
|++++|++|+|||+++++||++||++||+|+|||+|+|++||+++. ++|+|+..+++++||+||||||+|+||+|
T Consensus 277 gy~~~~~~i~~FW~vv~~~~~eer~~fL~FvTGs~rlP~~Gf~~L~~~~gp~~f~I~~~~~~~~LP~a~TCfn~L~LP~Y 356 (374)
T 1nd7_A 277 HYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPY 356 (374)
T ss_dssp SCCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTTCGGGCEETTEECCEEEECCSCTTSCCEEEGGGTEEECCCC
T ss_pred CCCCCCcceeeHHHHHHhcCHHHHHHHHHHHhCCCCCCCcchhhccccCCCCceEEEeCCCCCcCCEEEcccCEEECCCC
Confidence 9889999999999999999999999999999999999999999985 37999988888999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhh
Q psy7264 156 DNYEKFEKALITAIKAL 172 (206)
Q Consensus 156 ss~e~l~ekL~~AI~~~ 172 (206)
+|+|+|++||++||+++
T Consensus 357 ~s~e~l~~kL~~AI~~~ 373 (374)
T 1nd7_A 357 KSYEQLKEKLLFAIEET 373 (374)
T ss_dssp SSHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHhc
Confidence 99999888888888875
No 4
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-49 Score=361.63 Aligned_cols=166 Identities=33% Similarity=0.591 Sum_probs=154.7
Q ss_pred CchHHHHHHHHHhhcCCCCCCCcceeeccchhHH-HHHHHHhhcCCchhccCCCHHHHHHHHcCCCCCcHHHHHhhceec
Q psy7264 2 SERHVSYVAYLIHMNGTPLSRPRKVIVNLCPKQV-IIREYFLKFIPKKLVSYRLSPSTKLLLCGTSDYSIADLLAHHVVA 80 (206)
Q Consensus 2 ~~~~~~Yv~~~~~~~~~~~~~~~~v~~~~~~kq~-A~r~GF~~Vip~~~l~~fs~~EL~~lvcG~~~i~~e~l~~~~~y~ 80 (206)
++|+.+||+++++++ +...+.+|. ||++||.+|+|.+++++|+|+||+.++||.++||+++|++++.|.
T Consensus 257 ~~Nk~eYV~l~~~~~----------l~~~v~~q~~aF~~Gf~~vip~~~L~~F~~~ELe~Li~G~~~id~~dl~~~t~y~ 326 (429)
T 3olm_A 257 DGNKKEYVELYTQWR----------IVDRVQEQFKAFMDGFNELIPEDLVTVFDERELELLIGGIAEIDIEDWKKHTDYR 326 (429)
T ss_dssp TTTHHHHHHHHHHHH----------HTTTTHHHHHHHHHHHHTTSCHHHHTTSCHHHHHHHHTCBCCCCHHHHHHTEEEE
T ss_pred chhHHHHHHHHHHHH----------HHHhHHHHHHHHHHHhhhcCCHHHHhcCCHHHHHHHhcCCCCCCHHHHHHhcccc
Confidence 579999999999999 888888898 899999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHhhCCHHHHHhhhhhccCCCCCCCCCCCCCCC-----ceeEeccCCCCCCceeccccCeeecCCC
Q psy7264 81 SSFPHPKLLQWFWTALQNFTTEERARLLQFTTGSSQLPPGGFAQLKP-----KFSISYIQAHNSLPVAHTCSNQLCLPTY 155 (206)
Q Consensus 81 g~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TGs~rlP~~g~~~~~~-----~i~i~~~~~~~~LP~A~TCf~~L~LP~Y 155 (206)
|+++++++|+|||+++++||++||++||+|+|||+|+|++||+.+.+ +|+|...+++++||+||||||+|+||.|
T Consensus 327 Gy~~~~~~I~~FW~vv~~~s~eer~~fL~FvTGs~rlP~~Gf~~L~~~~g~~~f~I~~~~~~~~LP~A~TCfN~L~LP~Y 406 (429)
T 3olm_A 327 GYQESDEVIQWFWKCVSEWDNEQRARLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKAGEVQQLPKSHTCFNRVDLPQY 406 (429)
T ss_dssp SCCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCBCTTCGGGCEETTEECCEEEECCSCTTSCCEEEGGGTEEECCCC
T ss_pred CCCCCchHHHHHHHHHHhCCHHHHHHHHhHhcCCCCCCCcccccccCcCCCceEEEeeCCCCCCCCccccccCEeECCCC
Confidence 99999999999999999999999999999999999999999999874 6999988788999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhhhcccCCCCcchHHHHHHHHHHHHhcCCccccc
Q psy7264 156 DNYEKFEKALITAIKALSSNQLCLPTYDNYEKFEKALITAINEGSEGFGL 205 (206)
Q Consensus 156 ss~e~l~ekL~~AI~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~~~gf~~ 205 (206)
+|+|+ |++||.+||++ ++|||+
T Consensus 407 ss~e~---------------------------L~ekL~~AI~~-~~GFg~ 428 (429)
T 3olm_A 407 VDYDS---------------------------MKQKLTLAVEE-TIGFGQ 428 (429)
T ss_dssp SSHHH---------------------------HHHHHHHHHHH-TC----
T ss_pred CCHHH---------------------------HHHHHHHHHHc-CCCCCC
Confidence 99999 88888888988 689985
No 5
>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A
Probab=100.00 E-value=3.7e-50 Score=357.96 Aligned_cols=165 Identities=28% Similarity=0.482 Sum_probs=147.7
Q ss_pred CchHHHHHHHHHhhcCCCCCCCcceeeccchhHH-HHHHHHhhcCCchhcc-CCCHHHHHHHHcCCCCCcHHHHHhhcee
Q psy7264 2 SERHVSYVAYLIHMNGTPLSRPRKVIVNLCPKQV-IIREYFLKFIPKKLVS-YRLSPSTKLLLCGTSDYSIADLLAHHVV 79 (206)
Q Consensus 2 ~~~~~~Yv~~~~~~~~~~~~~~~~v~~~~~~kq~-A~r~GF~~Vip~~~l~-~fs~~EL~~lvcG~~~i~~e~l~~~~~y 79 (206)
++|+.+||+++++++ +...+.+|. ||++||.+|+|.+.+. +|+|+||+.++||.++||+++|+++|.|
T Consensus 190 ~~N~~eYv~l~~~~~----------l~~~i~~q~~af~~Gf~~vip~~~L~~lF~~~ELe~li~G~~~id~~~l~~~t~y 259 (358)
T 1c4z_A 190 NENRKEFVNLYSDYI----------LNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEY 259 (358)
T ss_dssp TTTHHHHHHHHHHHH----------HTSTTHHHHHHHHHHHHHHHSSSCSCSCSSTHHHHHHHHCBCCCCCTTTSTTCEE
T ss_pred cccHHHHHHHHHHHH----------hcccHHHHHHHHHHHHHHhcCcchhhcCCCHHHHHHHhhcccCCCHHHHHHHcee
Confidence 479999999999999 888888888 8999999999998886 8999999999999999999999999999
Q ss_pred c-CCCCCchHHHHHHHHHhhCCHHHHHhhhhhccCCCCCCCCCCCCCCCceeEeccC-CCCCCceeccccCeeecCCCCC
Q psy7264 80 A-SSFPHPKLLQWFWTALQNFTTEERARLLQFTTGSSQLPPGGFAQLKPKFSISYIQ-AHNSLPVAHTCSNQLCLPTYDN 157 (206)
Q Consensus 80 ~-g~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TGs~rlP~~g~~~~~~~i~i~~~~-~~~~LP~A~TCf~~L~LP~Yss 157 (206)
+ |+++++++|+|||+++++||++||++||+|+|||+|+|++||+.+ +++|.+.+ ++++||+||||||+|+||+|+|
T Consensus 260 ~~gy~~~~~~i~~FW~vv~~~~~eer~~fL~FvTGs~rlP~~Gf~~l--~~~I~~~~~~~~~LP~a~TCfn~L~LP~Y~s 337 (358)
T 1c4z_A 260 DGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKL--KMIIAKNGPDTERLPTSHTCFNVLLLPEYSS 337 (358)
T ss_dssp ESSCCSSCHHHHHHHHHHHTSCHHHHHHHHHHHSSSSSBCTTCGGGG--CCEEEEEEESCSCCCEEEGGGTEEEEEECSC
T ss_pred CCCCCCCcchhhhHHHHHHhCCHHHHHHHHHHHcCCCCCCCCCcccc--eeeeecCCCCCCCCeEEEccCCEeECCCCCC
Confidence 9 567889999999999999999999999999999999999999988 47777644 6789999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCcchHHHHHHHHHHHHhcCCcccccC
Q psy7264 158 YEKFEKALITAIKALSSNQLCLPTYDNYEKFEKALITAINEGSEGFGLA 206 (206)
Q Consensus 158 ~e~l~ekL~~AI~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~~~gf~~~ 206 (206)
+|+ |++||.+||++ ++|||++
T Consensus 338 ~e~---------------------------l~~kL~~AI~~-~~GFgl~ 358 (358)
T 1c4z_A 338 KEK---------------------------LKERLLKAITY-AKGFGML 358 (358)
T ss_dssp HHH---------------------------HHHHHHHHHHH-C------
T ss_pred HHH---------------------------HHHHHHHHHHh-CCCCCcC
Confidence 999 88888888888 4699984
No 6
>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A
Probab=100.00 E-value=2.9e-49 Score=355.80 Aligned_cols=160 Identities=34% Similarity=0.633 Sum_probs=150.6
Q ss_pred CchHHHHHHHHHhhcCCCCCCCcceeeccchhHH-HHHHHHhhcCCchhccCCCHHHHHHHHcCCCCCcHHHHHhhceec
Q psy7264 2 SERHVSYVAYLIHMNGTPLSRPRKVIVNLCPKQV-IIREYFLKFIPKKLVSYRLSPSTKLLLCGTSDYSIADLLAHHVVA 80 (206)
Q Consensus 2 ~~~~~~Yv~~~~~~~~~~~~~~~~v~~~~~~kq~-A~r~GF~~Vip~~~l~~fs~~EL~~lvcG~~~i~~e~l~~~~~y~ 80 (206)
++|+.+||+++++++ +...+.+|. ||++||.+|+|.+++++|+|+||+.++||.++||+++|+++|.|.
T Consensus 226 ~~N~~eYv~l~~~~~----------l~~~i~~q~~af~~Gf~~vip~~~L~~F~~~ELe~licG~~~id~~dl~~~t~y~ 295 (392)
T 2oni_A 226 NENKREYIDLVIQWR----------FVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQHSIYK 295 (392)
T ss_dssp TTTHHHHHHHHHHHH----------HTTTSHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHCCCCCCHHHHHHTCEEE
T ss_pred hhhHHHHHHHHHHHH----------HhhhHHHHHHHHHHHHHHhccHHhhhcCCHHHHHHhhcCCCCCCHHHHhcceEEC
Confidence 489999999999999 888888898 899999999999999999999999999999999999999999999
Q ss_pred C-CCCCchHHHHHHHHHhhCCHHHHHhhhhhccCCCCCCCCCCCCCC-----CceeEeccCCCCCCceeccccCeeecCC
Q psy7264 81 S-SFPHPKLLQWFWTALQNFTTEERARLLQFTTGSSQLPPGGFAQLK-----PKFSISYIQAHNSLPVAHTCSNQLCLPT 154 (206)
Q Consensus 81 g-~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TGs~rlP~~g~~~~~-----~~i~i~~~~~~~~LP~A~TCf~~L~LP~ 154 (206)
| +++++++|+|||+++++||+|||++||+|+|||+|+|++||+.+. ++++|...+++++||+||||||+|+||+
T Consensus 296 ~gy~~~~~~i~~FW~vv~~~s~eer~~fL~FvTGs~rlP~~Gf~~L~~~~gp~~f~I~~~~~~~~LP~a~TCfn~L~LP~ 375 (392)
T 2oni_A 296 NGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEKLPRAHTCFNRLDLPP 375 (392)
T ss_dssp TTCCTTCHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTTCGGGCEETTEECCCEEEECSCTTSCCEEEGGGTEEEECC
T ss_pred CCCCCCCchheeHHHHHHhCCHHHHHHHHHHHhCCCCCCCcchhhhcccCCCCceEEEeCCCCCcCcEEEcccCEeECCC
Confidence 6 578899999999999999999999999999999999999999884 3689988878889999999999999999
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy7264 155 YDNYEKFEKALITAIKA 171 (206)
Q Consensus 155 Yss~e~l~ekL~~AI~~ 171 (206)
|+|+|+||+||++||+|
T Consensus 376 Yss~e~L~~kL~~AI~n 392 (392)
T 2oni_A 376 YETFEDLREKLLMAVEN 392 (392)
T ss_dssp CSSHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 99999999999999875
No 7
>3pt3_A E3 ubiquitin-protein ligase UBR5; EDD, HHYD, mixed alpha-beta fold, ubiquitin ligase; 1.97A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=252.95 Aligned_cols=110 Identities=27% Similarity=0.568 Sum_probs=76.8
Q ss_pred CCCcHHHHHhhceecCCC-CCc----hHHHHHHHHHhhCCHHHHHhhhhhccCCCCCCC--CCCCCCCCceeEeccCCCC
Q psy7264 66 SDYSIADLLAHHVVASSF-PHP----KLLQWFWTALQNFTTEERARLLQFTTGSSQLPP--GGFAQLKPKFSISYIQAHN 138 (206)
Q Consensus 66 ~~i~~e~l~~~~~y~g~~-~~~----~~i~~Fw~vl~~~s~eer~~fL~F~TGs~rlP~--~g~~~~~~~i~i~~~~~~~ 138 (206)
+.||+++|+++|.|.|++ .++ ++|+|||+++++||++||++||+|+||++|+|+ +||+.+ ++|+|.. ++++
T Consensus 2 ~~~Dv~dLr~~T~Y~~~~~~~~~~~~~~i~wFW~vv~~~~~eer~~fL~FvTGs~rlP~~~~Gf~~l-~~~~i~~-~~~~ 79 (118)
T 3pt3_A 2 PLGSVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPM-PSITIRP-PDDQ 79 (118)
T ss_dssp ----------CCEEEECSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHSCC-------------CEEEEES-CCTT
T ss_pred CccCHHHHHhhcEEcCCcCCCccccchHHHHHHHHHHHCCHHHHHHHHhHhcCCCCCCCcccCcccC-CcEEEEC-CCCC
Confidence 569999999999999875 444 899999999999999999999999999999999 799988 6788874 5788
Q ss_pred CCceeccccCeeecCCCCCHHHHHHHHHHHHHhhhhcccCCCCcchHHHHHHHHHHHHhcCCcccccC
Q psy7264 139 SLPVAHTCSNQLCLPTYDNYEKFEKALITAIKALSSNQLCLPTYDNYEKFEKALITAINEGSEGFGLA 206 (206)
Q Consensus 139 ~LP~A~TCf~~L~LP~Yss~e~l~ekL~~AI~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~~~gf~~~ 206 (206)
+||+||||||+|+||+|+|+|+ |++||..||++ +||||+
T Consensus 80 ~LP~A~TCfn~L~LP~Y~s~e~---------------------------L~~kL~~AI~~--~gfGfv 118 (118)
T 3pt3_A 80 HLPTANTCISRLYVPLYSSKQI---------------------------LKQKLLLAIKT--KNFGFV 118 (118)
T ss_dssp SCCEEETTTTEEEEECCSSHHH---------------------------HHHHHHHHHC---------
T ss_pred CCccceehhceeECCCCCCHHH---------------------------HHHHHHHHHHh--CCcCCC
Confidence 9999999999999999999999 99999999986 899985
No 8
>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A
Probab=78.71 E-value=1 Score=39.63 Aligned_cols=25 Identities=44% Similarity=0.777 Sum_probs=22.8
Q ss_pred cccCCCCcchHHHHHHHHHHHHhcC
Q psy7264 175 NQLCLPTYDNYEKFEKALITAINEG 199 (206)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~ai~~~ 199 (206)
+.+++|++..++.|++||.+||++|
T Consensus 349 n~L~LP~Y~s~e~l~~kL~~AI~~~ 373 (374)
T 1nd7_A 349 NRLDLPPYKSYEQLKEKLLFAIEET 373 (374)
T ss_dssp TEEECCCCSSHHHHHHHHHHHHHSC
T ss_pred CEEECCCCCCHHHHHHHHHHHHHhc
Confidence 4588999999999999999999984
No 9
>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A
Probab=63.81 E-value=2.5 Score=37.36 Aligned_cols=24 Identities=33% Similarity=0.760 Sum_probs=21.2
Q ss_pred cccCCCCcchHHHHHHHHHHHHhc
Q psy7264 175 NQLCLPTYDNYEKFEKALITAINE 198 (206)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~ai~~ 198 (206)
+.+++|++..++.|++||.+||++
T Consensus 369 n~L~LP~Yss~e~L~~kL~~AI~n 392 (392)
T 2oni_A 369 NRLDLPPYETFEDLREKLLMAVEN 392 (392)
T ss_dssp TEEEECCCSSHHHHHHHHHHHHC-
T ss_pred CEeECCCCCCHHHHHHHHHHHHhC
Confidence 458889999999999999999974
No 10
>3lfp_A CSP231I C protein; transcriptional regulator, DNA binding protein, helix-turn-H restriction-modification, transcription; 2.00A {Citrobacter SP} PDB: 3lis_A
Probab=52.36 E-value=26 Score=23.63 Aligned_cols=60 Identities=13% Similarity=-0.011 Sum_probs=43.6
Q ss_pred CCHHH----HHHHHcCCCCCcHHHHHhhceecCCC-----CCchHHHHHHHHHhhCCHHHHHhhhhhccC
Q psy7264 53 RLSPS----TKLLLCGTSDYSIADLLAHHVVASSF-----PHPKLLQWFWTALQNFTTEERARLLQFTTG 113 (206)
Q Consensus 53 fs~~E----L~~lvcG~~~i~~e~l~~~~~y~g~~-----~~~~~i~~Fw~vl~~~s~eer~~fL~F~TG 113 (206)
+++.- +..+-.|....+.+.+.+...+-|.+ .......-....+..++++++..+ .|+.+
T Consensus 26 is~~~~~~~is~~E~g~~~p~~~~l~~la~~l~v~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~-~~l~~ 94 (98)
T 3lfp_A 26 IDEASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYLYTPEDDLAQIILTWNELNEQERKRI-NFYIR 94 (98)
T ss_dssp CCHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHTSCGGGGGCCCHHHHHHHHHHTTCCHHHHHHH-HHHHT
T ss_pred CCcchhhhHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHhCCChhHHHHHHHHHhCCHHHHHHH-HHHHH
Confidence 56777 88888898778888887766544332 223344557788899999999998 88865
No 11
>3ivp_A Putative transposon-related DNA-binding protein; APC62618, clostridium diffic structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile}
Probab=47.26 E-value=29 Score=24.47 Aligned_cols=61 Identities=10% Similarity=-0.033 Sum_probs=44.2
Q ss_pred CCHHHHHHHHcCCCCCcHHHHHhhceecCC-----------CCCchHHHHHHHHHhhCCHHHHHhhhhhccC
Q psy7264 53 RLSPSTKLLLCGTSDYSIADLLAHHVVASS-----------FPHPKLLQWFWTALQNFTTEERARLLQFTTG 113 (206)
Q Consensus 53 fs~~EL~~lvcG~~~i~~e~l~~~~~y~g~-----------~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TG 113 (206)
+++.-+..+-.|....+.+.+.+.+.+-|. ...+.....+.+.+..++++++..++.++.+
T Consensus 37 is~~~is~~E~g~~~p~~~~l~~ia~~l~v~~~~l~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~i~~~i~~ 108 (126)
T 3ivp_A 37 IDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEFFLPASSQVKSTKRRQLENKIDNFTDADLVIMESVADG 108 (126)
T ss_dssp CCHHHHHHHHHSCCCCCHHHHHHHHHHHTCCSHHHHSCCCCCCCCHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHhCCCccccchHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 677788888888877777777665543221 1235566678899999999999988887753
No 12
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=45.09 E-value=19 Score=20.54 Aligned_cols=21 Identities=24% Similarity=0.521 Sum_probs=17.6
Q ss_pred HHHHHHHHhh--CCHHHHHhhhh
Q psy7264 89 LQWFWTALQN--FTTEERARLLQ 109 (206)
Q Consensus 89 i~~Fw~vl~~--~s~eer~~fL~ 109 (206)
-+-|.+||+. +|++||-.|++
T Consensus 6 QnaFYevLh~~nLtEeQrn~yI~ 28 (34)
T 1l6x_B 6 QRRFYEALHDPNLNEEQRNAKIK 28 (34)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCHHHHHhHHH
Confidence 4569999985 99999998876
No 13
>1zda_A Mini protein A domain, Z38; IGG binding domain, protein A mimic; NMR {Synthetic construct} SCOP: k.13.1.1 PDB: 1zdb_A
Probab=34.08 E-value=20 Score=20.99 Aligned_cols=20 Identities=25% Similarity=0.574 Sum_probs=17.2
Q ss_pred HHHHHHHhh--CCHHHHHhhhh
Q psy7264 90 QWFWTALQN--FTTEERARLLQ 109 (206)
Q Consensus 90 ~~Fw~vl~~--~s~eer~~fL~ 109 (206)
+-|.+||+. +|+|||-.|++
T Consensus 12 naFYevLh~~nLtEeQrn~yI~ 33 (38)
T 1zda_A 12 RRFYEALHDPNLNEEQRNAKIK 33 (38)
T ss_dssp HHHHHHHSCSSSCTTHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHhHHH
Confidence 459999985 99999999886
No 14
>2kzi_A Engineered protein, ZHER2 affibody; protein binding; NMR {Staphylococcus aureus} PDB: 2kzj_A 2otk_E
Probab=33.52 E-value=19 Score=23.91 Aligned_cols=19 Identities=5% Similarity=0.408 Sum_probs=16.3
Q ss_pred HHHHHHhh--CCHHHHHhhhh
Q psy7264 91 WFWTALQN--FTTEERARLLQ 109 (206)
Q Consensus 91 ~Fw~vl~~--~s~eer~~fL~ 109 (206)
-||+|+.. ++++||..|++
T Consensus 24 AFYeiL~~pnLtEeQrngfI~ 44 (70)
T 2kzi_A 24 AYWEIALLPNLNNQQKRAFIR 44 (70)
T ss_dssp SSHHHHHCSSSCHHHHHHHHH
T ss_pred HHHHHHcCCCcchhhhhcccc
Confidence 49999985 99999988875
No 15
>1b0n_A Protein (SINR protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1 a.35.1.3 PDB: 2yal_A
Probab=29.46 E-value=1.2e+02 Score=20.26 Aligned_cols=60 Identities=10% Similarity=0.032 Sum_probs=34.9
Q ss_pred CCHHHHHHHHcC-CCCCcHHHHHhhceec--------CCC--------CCchHHHHHHHHH-hhCCHHHHHhhhhhcc
Q psy7264 53 RLSPSTKLLLCG-TSDYSIADLLAHHVVA--------SSF--------PHPKLLQWFWTAL-QNFTTEERARLLQFTT 112 (206)
Q Consensus 53 fs~~EL~~lvcG-~~~i~~e~l~~~~~y~--------g~~--------~~~~~i~~Fw~vl-~~~s~eer~~fL~F~T 112 (206)
+++.-+..+..| ....+.+.+.+...+- ++. ..+.....+...+ ..++++++..++.|+-
T Consensus 26 is~~~i~~~e~g~~~~p~~~~l~~ia~~l~v~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~i~~~i~ 103 (111)
T 1b0n_A 26 VAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREFLDYQK 103 (111)
T ss_dssp CCHHHHHHHHTTCCSCCCHHHHHHHHHHHTCCHHHHHCCTTCC-----CCHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHcCCCCCCCHHHHHHHHHHHCcCHHHHhcCCCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 455666666667 5555555554433221 111 1133444566777 8999999998887763
No 16
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=28.80 E-value=31 Score=30.40 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=21.7
Q ss_pred HHHHHHHhhhh-------cccCCC-CcchHHHHHHHHHHHHh
Q psy7264 164 ALITAIKALSS-------NQLCLP-TYDNYEKFEKALITAIN 197 (206)
Q Consensus 164 kL~~AI~~~~~-------~~~~~~-~~~~~~~~~~~l~~ai~ 197 (206)
||..+|+.|.. |.+... |+++|+.+.+.|..++.
T Consensus 152 RLE~~Id~c~~~C~~sC~~~l~~~vD~e~ye~qqKQL~qv~a 193 (390)
T 1deq_A 152 RLEVDIDIKIRSCKGSCSRALEHKVDLEDYKNQQKQLEQVIA 193 (390)
T ss_pred HHHHHHHHHhcccccccchhhhhhccHHHHHHHHHHHHhhhh
Confidence 35666666654 233333 88888888888877764
No 17
>3op9_A PLI0006 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, transcription regulat; HET: MSE; 1.90A {Listeria innocua}
Probab=27.29 E-value=82 Score=21.50 Aligned_cols=60 Identities=13% Similarity=0.095 Sum_probs=38.3
Q ss_pred CCHHHHHHHHcCCCCCcHHHHHhhceecCC-------------CCCchHHHHHHHHHhhCCHHHHHhhhhhcc
Q psy7264 53 RLSPSTKLLLCGTSDYSIADLLAHHVVASS-------------FPHPKLLQWFWTALQNFTTEERARLLQFTT 112 (206)
Q Consensus 53 fs~~EL~~lvcG~~~i~~e~l~~~~~y~g~-------------~~~~~~i~~Fw~vl~~~s~eer~~fL~F~T 112 (206)
++..-+..+..|....+.+.+.+.+.+-|. .........+.+.+..++++++..++.++.
T Consensus 34 is~~~i~~~e~g~~~p~~~~l~~la~~l~v~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~i~ 106 (114)
T 3op9_A 34 VQTRTVAYYMSGETKPDIEKLIRLATYFHLSIDELVGYVQEDKVWNDLSLKQWLLSLNLRSEEEIAKIKILVD 106 (114)
T ss_dssp SCHHHHHHHHHTSSCCCHHHHHHHHHHHTCCHHHHHTCCCC--CCSCHHHHHHHHHGGGSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHHhcCCCcccccCcHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 466667777777666666666554432111 112445566778889999999998877653
No 18
>2lr2_A Immunoglobulin G-binding protein A; Z domain, lanthanide binding TAG, de novo protein; NMR {Artificial gene}
Probab=25.51 E-value=43 Score=22.82 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=22.9
Q ss_pred chHHHHHHHHHhh--CCHHHHHhhhhhccCCC
Q psy7264 86 PKLLQWFWTALQN--FTTEERARLLQFTTGSS 115 (206)
Q Consensus 86 ~~~i~~Fw~vl~~--~s~eer~~fL~F~TGs~ 115 (206)
...-.-||+|+.- +++|||..|++-.---+
T Consensus 20 k~qqnAfyEIl~lPNLneeQrnafiqSLkDDp 51 (88)
T 2lr2_A 20 KEQQNAFYEILHLPNLNEEQRNAFIQSLKDDS 51 (88)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhccCc
Confidence 3455569999984 99999999998665443
No 19
>3mkb_A Hemoglobin subunit alpha; oxygen affinity, shortfin MAK storage, oxygen transport; HET: HEM; 1.90A {Isurus oxyrinchus} SCOP: a.1.1.2 PDB: 1gcv_A* 1gcw_A*
Probab=21.28 E-value=82 Score=23.07 Aligned_cols=58 Identities=9% Similarity=0.063 Sum_probs=34.3
Q ss_pred CceeccccCeeecCCCCCHHH--HHHHHHHHHHh----hhhcc---------cC-C--CCcchHHHHHHHHHHHHhc
Q psy7264 140 LPVAHTCSNQLCLPTYDNYEK--FEKALITAIKA----LSSNQ---------LC-L--PTYDNYEKFEKALITAINE 198 (206)
Q Consensus 140 LP~A~TCf~~L~LP~Yss~e~--l~ekL~~AI~~----~~~~~---------~~-~--~~~~~~~~~~~~l~~ai~~ 198 (206)
.|...+-|+..+++. .|.+. =.+|+..||.. ..++. -| . -|.+||..+.+.|..+|.+
T Consensus 36 ~P~~k~~F~~~~~~~-~s~~~~aHg~~v~~al~~~v~~ld~l~~~l~~L~~~H~~~l~V~p~~f~~l~~~Ll~~l~~ 111 (140)
T 3mkb_A 36 HPGAKSYFDYADYSA-AGAKVQLHGGKVIRAVVSAAEHDDDLHAHLMVLAVTHGKKLLVDPSNFPMLSECILVTLAT 111 (140)
T ss_dssp CGGGGGGCCCSCCST-TCHHHHHHHHHHHHHHHHHHTTTTTHHHHTHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred ChHHHhhCccccCCC-CCHHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHH
Confidence 466667777666665 44442 11244444433 32211 12 1 2889999999999999976
No 20
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=20.29 E-value=55 Score=18.75 Aligned_cols=31 Identities=6% Similarity=-0.003 Sum_probs=24.3
Q ss_pred CCchHHHHHHHHHhhCCHHHHHhhhhhccCC
Q psy7264 84 PHPKLLQWFWTALQNFTTEERARLLQFTTGS 114 (206)
Q Consensus 84 ~~~~~i~~Fw~vl~~~s~eer~~fL~F~TGs 114 (206)
++..+-.+|-++..+=+++.||...+.++-|
T Consensus 4 p~~~l~~~fk~iY~~gddd~kram~KS~~eS 34 (35)
T 2jtt_C 4 SSEGLMNVLKKIYEDGDDDMKRTINKAWVES 34 (35)
T ss_dssp -CCSHHHHHHHHHTTCCSSHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHhhc
Confidence 4455677899999999999999888877654
Done!