RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7266
(1175 letters)
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A
{Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1
Length = 722
Score = 765 bits (1976), Expect = 0.0
Identities = 185/621 (29%), Positives = 305/621 (49%), Gaps = 41/621 (6%)
Query: 282 NILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALE 341
++TSALPY N H G++ G L AD+F R+ RL + +++ GTDE+GT +AL+
Sbjct: 3 RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALK 62
Query: 342 EGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASV 401
EG +PR+I D++ + ++ +I FD+FGRT P ++ Q F + ++ G
Sbjct: 63 EGRSPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVT 122
Query: 402 EQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTV 461
+Q +C FL DRFV G CP C ED +GDQC+ CG+ + LI PRC C + +
Sbjct: 123 KQAYCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISF 182
Query: 462 KSSTQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGIPVP 521
+ S ++++ ++L+ W+ + W N + + +W+++GL+ R ITRDL WGIPVP
Sbjct: 183 RDSAHYYIKMQDFAERLKRWIEKQP--WKPNVKNMVLSWIEEGLEERAITRDLNWGIPVP 240
Query: 522 L--PGFENKYS----------LSSSPSLVQFLPTA--------TPQSKITLYQFMAKDNV 561
L + K +S + + + + + F+ KDN+
Sbjct: 241 LDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKDNI 300
Query: 562 PFHSIMFPATLVAAGDQ--------YTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKD 613
PFH+I +PA L+A G + I A EYL E KFS SR ++ + D
Sbjct: 301 PFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLD 360
Query: 614 TGLPADIFRFYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINRALSFIEKNYGSTI 673
PAD R+YL + PE +D+ FS+ D + N EL+NNLGNF++RAL+F+ + + +
Sbjct: 361 V-FPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFVNRYFDGVV 419
Query: 674 PEISPIHE-DFLLLALINRELSAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLF 732
PE + E D L I + ++ + +D ++ +++++ + N+Y +QPW
Sbjct: 420 PERGELDELDREALEEIEKAFKEVGELIMNYRFKDALKRVMSLASFGNRYFDHKQPWKTA 479
Query: 733 KGSPEQKSRASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLVQ 792
K R T + I Q+ L +LL P++P + I L +K
Sbjct: 480 KEDKV---RTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNLDEVKRWEFRE----- 531
Query: 793 FLPTGHKIGTPAPLFRKIEQAQVDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEA 852
LP GHK+ P LF+K+ Q+ + L Y + N E + +K V + +
Sbjct: 532 -LPAGHKVRKPEILFKKVTDDQIIYFILNYMAKGNPEGARILLDKYYKREDVIRVAKEKF 590
Query: 853 AVATQGNLVRQVKSSGVEKSE 873
+ L R K +++ +
Sbjct: 591 GDEAEVVLRRVYKDIKLKEKK 611
Score = 52.8 bits (127), Expect = 5e-07
Identities = 16/76 (21%), Positives = 31/76 (40%)
Query: 984 HKIGTPAPLFRKIEQAQVDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAAVATQ 1043
HK+ P LF+K+ Q+ + L Y + N E + +K V + + +
Sbjct: 536 HKVRKPEILFKKVTDDQIIYFILNYMAKGNPEGARILLDKYYKREDVIRVAKEKFGDEAE 595
Query: 1044 GNLVRQVKSSGVEKSE 1059
L R K +++ +
Sbjct: 596 VVLRRVYKDIKLKEKK 611
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA
synthetase, ATP-binding, ligas binding,
nucleotide-binding, protein biosynthesis; HET: CIT;
1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A
3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A*
1pg2_A* 1qqt_A 1mea_A 1med_A
Length = 560
Score = 729 bits (1885), Expect = 0.0
Identities = 133/558 (23%), Positives = 235/558 (42%), Gaps = 36/558 (6%)
Query: 279 NENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETK 338
IL+T A PY N HLG+++ + ADV+ R+ R+ ++ D +GT K
Sbjct: 16 VAKKILVTCASPYANGSIHLGHMLEHI-QADVWVRYQRMRGHEVNFICADDAHGTPIMLK 74
Query: 339 ALEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSS 398
A + G+TP Q+ + H+ + F I +D + T + + ++ + ++ R+ + GF +
Sbjct: 75 AQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKN 134
Query: 399 ASVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQA 458
++ QL+ + FL DRFV+G CPKC+ D GD C+ CG + ELI+P+
Sbjct: 135 RTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGAT 194
Query: 459 PTVKSSTQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGI 518
P ++ S F +LP + LQ+W S + W + GL+ I+RD +
Sbjct: 195 PVMRDSEHFFFDLPSFSEMLQAWTR--SGALQEQVANKMQEWFESGLQQWDISRDAPY-F 251
Query: 519 PVPLPGFENKYS----------LSSSPSLVQFLPTAT-------PQSKITLYQFMAKDNV 561
+P KY + S +L + S LY F+ KD V
Sbjct: 252 GFEIPNAPGKYFYVWLDAPIGLMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIV 311
Query: 562 PFHSIMFPATLVAAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIF 621
F S+ +PA L + + K +++ Y+ K SKSRGT + + + AD
Sbjct: 312 YFLSLFWPAMLEGSN--FRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNH-FDADSL 368
Query: 622 RFYLLY-VRPENQDTSFSWQDLATKNNSELLNNLGNFINRALSFIEKNYGSTIPEISPIH 680
R+Y + D + +D + N++++N + N +R FI K + +
Sbjct: 369 RYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASEL--- 425
Query: 681 EDFLLLALINRELSAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLFKGSPEQKS 740
D L + + +R I+ ++ N+Y+ Q PWV+ K + +
Sbjct: 426 ADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAK-QEGRDA 484
Query: 741 RASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLVQFLPTGHKI 800
+ + + +L L P +P + L + +Q GHK+
Sbjct: 485 DLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN-------TELTWDGIQQPLLGHKV 537
Query: 801 GTPAPLFRKIEQAQVDEW 818
L+ +I+ QV+
Sbjct: 538 NPFKALYNRIDMRQVEAL 555
Score = 38.8 bits (91), Expect = 0.012
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 984 HKIGTPAPLFRKIEQAQVDEW 1004
HK+ L+ +I+ QV+
Sbjct: 535 HKVNPFKALYNRIDMRQVEAL 555
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein
biosynthesis, ligase, aminoacyl- synthetase; HET: ADN
CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A*
Length = 524
Score = 299 bits (768), Expect = 4e-90
Identities = 136/552 (24%), Positives = 228/552 (41%), Gaps = 70/552 (12%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGL 344
IT+A+ Y N VPH+G+ ++ D +RF RL + Y++GTD +G A +EG+
Sbjct: 16 ITTAIAYPNGVPHIGHAY-EYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAKEGI 74
Query: 345 TPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASVEQL 404
++ + + + + E I FD F RTS E + ++ R+ AG + +
Sbjct: 75 PAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAYKGW 134
Query: 405 HCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTVKSS 464
+ + +RF + + + + T
Sbjct: 135 YSIRDERFFTEN-----------------------ETTEQPDG-TRIATETGAPVTWTEE 170
Query: 465 TQLFLELPKIEDKLQSWVSETSDQWSSNAR---VICKAWLKDGLKPRCITR-DLKWGIPV 520
F L D+L + E + +AR ++ +++ GLK I+R WG+PV
Sbjct: 171 QTYFFRLSAYTDRLLALYEEHPEFIGPDARRNEIV--SFVSGGLKDLSISRTTFDWGVPV 228
Query: 521 PLPGFENK------------------YSLSSSPSLVQFLPTATPQSKITLYQFMAKDNVP 562
P + + S S ++ P + KD +
Sbjct: 229 P---DHPDHVMYVWVDALTNYLTGVGFPDTESESFRRYWPAD--------LHMIGKDIIR 277
Query: 563 FHSIMFPATLVAAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDT-GLPADIF 621
FH++ +PA L++AG K I A +L K SKS G V N DT GL D
Sbjct: 278 FHTVYWPAFLMSAGLPLPK--RIFAHGWLLNRGEKMSKSIGNVVDPVNLVDTFGL--DQV 333
Query: 622 RFYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINRALSFIEKNYGSTIPEISPIHE 681
R++LL P QD S++ + + N++L N LGN R+LS + KN G+ +P+ +
Sbjct: 334 RYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQRSLSMVAKNLGAAVPDPGEFTD 393
Query: 682 -DFLLLALINRELSAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLFK-GSPEQK 739
D LLA + L D + + I ++ N+Y Q+PWVL K + E +
Sbjct: 394 EDTALLAAADALLERVREHFDVPAMHLALEAIWSVLGAANRYFSAQEPWVLRKSDAAEDQ 453
Query: 740 SRASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLVQFLPTGHK 799
R TVL +V + SLLL P MP + + + LG + S ++ + G
Sbjct: 454 QRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQPTDERDFS---AIANRIKPGTS 510
Query: 800 IGTPAPLFRKIE 811
+ P+ +F + +
Sbjct: 511 LPAPSGIFPRYQ 522
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class
IA:methionyl-tRNA...; structural genomics; 2.65A
{Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Length = 536
Score = 294 bits (756), Expect = 2e-88
Identities = 123/578 (21%), Positives = 216/578 (37%), Gaps = 71/578 (12%)
Query: 257 VAWTQGSPVPLRTRTAPVLPQPNENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCR 316
+A + + IT+A+ Y N PH+G+ +++ D +RF R
Sbjct: 1 MAHHHHHHMGTLEAQTQGPGSMSREKYYITTAIAYPNGKPHIGHAY-ELIATDAMARFQR 59
Query: 317 LVNRNTLYVSGTDEYGTATETKALEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTST 376
L + +++GTDE+G A +EG+TPR + D+ + R + E D + RTS
Sbjct: 60 LNGMDVYFLTGTDEHGIKMLQSARKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSE 119
Query: 377 PQQTEIVQHLFDRVHKAGFTSSASVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCD 436
+ + Q ++ + G + + + + +
Sbjct: 120 ERHYKASQAIWQAMVANGDIYKGGYAGWYSVRDEAYYGEE-------------------- 159
Query: 437 GCGQLINAIELIQPRCKQCSQAPTVKSSTQLFLELPKIEDKLQSWVSETSDQWSSNAR-- 494
+ + R F L +DKL R
Sbjct: 160 ---ETEVRAD--GVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENNPGFIMPAERRN 214
Query: 495 -VICKAWLKDGLKPRCITR-DLKWGIPVPLPGFENKYS-----------------LSSSP 535
++ +++K GLK I+R WGIPVP + K+ ++
Sbjct: 215 EIV--SFVKSGLKDLSISRTTFDWGIPVP---GDEKHVMYVWVDALTNYITALGYPDTTD 269
Query: 536 SLVQFLPTATPQSKITLYQFMAKDNVPFHSIMFPATLVAAGDQYTKVNHIMATEYLNYED 595
+ P + KD FH++ +PA L++A K + A +L
Sbjct: 270 ERWAYWPAN--------AHIIGKDISRFHAVYWPAFLMSAQLPLPK--RVFAHGFLFNRG 319
Query: 596 GKFSKSRGTGVFGNNAKDT-GLPADIFRFYLLYVRPENQDTSFSWQDLATKNNSELLNNL 654
K SKS G + + GL D R++L+ P QD S+S + + + N++L N+L
Sbjct: 320 EKMSKSVGNVIDPFELVERYGL--DQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDL 377
Query: 655 GNFINRALSFIEKNYGSTIPEISPIHE-DFLLLALINRELSAYYSVLDKAKLRDGIRYIL 713
GN R+LS I KN +P+ E D +L + L +D L + I
Sbjct: 378 GNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIF 437
Query: 714 NISRYCNQYMQTQQPWVLFKGSPEQKSRASTVLGILCQVSYLLSLLLSPYMPSTASTIAS 773
+ N+Y Q+PW L K +R TVL + +V + +++ P++P +A +
Sbjct: 438 AVVAEANRYFAGQEPWALRK---TDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLD 494
Query: 774 QLGASHLKYSLSSSPSLVQFLPTGHKIGTPAPLFRKIE 811
L K + + L G + P P+F +
Sbjct: 495 ILAVPADKRQFADVLA--SPLAGGTDLPAPQPVFPRYV 530
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus}
PDB: 2ct8_A*
Length = 497
Score = 290 bits (744), Expect = 4e-87
Identities = 136/547 (24%), Positives = 233/547 (42%), Gaps = 79/547 (14%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGL 344
+T+ + YVN+VPHLG+ ++AD +R+ RL + + +++GTDE+G + KA E G+
Sbjct: 9 VTTPIYYVNDVPHLGHAY-TTIAADTIARYYRLRDYDVFFLTGTDEHGLKIQKKAEELGI 67
Query: 345 TPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASVEQL 404
+P+++ D+ ++++E+ +I++ F RT+ P + VQ +F+ +K G E
Sbjct: 68 SPKELVDRNAERFKKLWEFLKIEYTKFIRTTDPYHVKFVQKVFEECYKRGDIYLGEYEGW 127
Query: 405 HCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQ-PRCKQCSQAPTVKS 463
+C C+ F ++ EL + C +
Sbjct: 128 YCVGCEEFKSEA-----------------------------ELAEDHTCPIHQKKCEYIK 158
Query: 464 STQLFLELPKIEDKLQSWVSETSDQWSSNAR---VICKAWLKDGLKPRCITRD---LKWG 517
F L K +DKL + + + R +I +++K GLK +TR +KWG
Sbjct: 159 EPSYFFRLSKYQDKLLELYEKNPEFIQPDYRRNEII--SFVKQGLKDLSVTRPRSRVKWG 216
Query: 518 IPVPLPGFENKYS-----------LSSSPSLVQ-FLPTATPQSKITLYQFMAKDNVPFHS 565
IPVP F+ +++ +S+ V+ + P + KD + FH+
Sbjct: 217 IPVP---FDPEHTIYVWFDALFNYISALEDKVEIYWPAD--------LHLVGKDILRFHT 265
Query: 566 IMFPATLVAAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDT-GLPADIFRFY 624
+ +PA L++ G + K + A + E K SK+ G V GL D R++
Sbjct: 266 VYWPAFLMSLGYELPK--KVFAHGWWTVEGKKMSKTLGNVVDPYEVVQEYGL--DEVRYF 321
Query: 625 LLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINRALSFIEKNYGSTIPEISPIHEDFL 684
LL P QD FS + + + N EL N +GN +R ++ K G + D
Sbjct: 322 LLREVPFGQDGDFSKKAILNRINGELANEIGNLYSRVVNMAHKFLGGEVSGA----RDEE 377
Query: 685 LLALINRELSAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLFKGSPEQKSRAST 744
+ + Y + ++K I IL + Y N+Y+ +QPW L K +K
Sbjct: 378 YAKIAQESIKNYENYMEKVNFYKAIEEILKFTSYLNKYVDEKQPWALNK--ERKKEELQK 435
Query: 745 VLGILCQVSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLVQFLPTGHKIGTPA 804
VL L ++L+ LL P P+ LG L + +K+G
Sbjct: 436 VLYALVDGLFVLTHLLYPITPNKMKEALQMLGEK------EFLKELKPYSKNTYKLGERK 489
Query: 805 PLFRKIE 811
LF K E
Sbjct: 490 ILFPKRE 496
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs,
parasite, protein-IN complex, translation, nucleotide
binding; HET: C13; 2.55A {Trypanosoma brucei}
Length = 542
Score = 284 bits (728), Expect = 2e-84
Identities = 120/561 (21%), Positives = 198/561 (35%), Gaps = 59/561 (10%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGL 344
+TS + YVN PH+G++ L DV R+ R+ ++GTDE+G A ++ +
Sbjct: 13 VTSPIYYVNAAPHIGHVY-STLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQV 71
Query: 345 TPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASVEQL 404
+P ++ +E + DYF RT+ Q +V+ L+ ++ + G E
Sbjct: 72 SPYDFTTAVAGEFKKXFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEGW 131
Query: 405 HCAQCDRFLADR-FVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTVKS 463
+ + FL + +GV + T S
Sbjct: 132 YSISDESFLTPQNITDGVDKDGN---------------------PCKVSLESGHVVTWVS 170
Query: 464 STQLFLELPKIEDKLQSWVSETSDQWSSNARV-ICKAWLKDGLKPRCITRD----LKWGI 518
L ++L W R ++ GL ++R W I
Sbjct: 171 EENYMFRLSAFRERLLEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRARATLHNWAI 230
Query: 519 PVP----------LPGFENKYSLSSSPSLVQFLPTATPQSKITL------YQFMAKDNVP 562
PVP L N + S + L + KD +
Sbjct: 231 PVPGNPDHXVYVWLDALTNYLTGSRLRVDESGKEVSLVDDFNELERFPADVHVIGKDILK 290
Query: 563 FHSIMFPATLVAAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIFR 622
FH+I +PA L++AG K I+A + + K SKS G + D +
Sbjct: 291 FHAIYWPAFLLSAGLPLPK--KIVAHGWWTKDRKKISKSLGNVFDPVEKAEE-FGYDALK 347
Query: 623 FYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINRALSFIEKNYGSTIPEISPIHE- 681
++LL + D +S +++ + N EL + LGN + R S N P + E
Sbjct: 348 YFLLRESGFSDDGDYSDKNMIARLNGELADTLGNLVMRCTSAK-INVNGEWPSPAAYTEE 406
Query: 682 DFLLLALINRELSAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLFKGSPEQKSR 741
D L+ LI ++ I + ++ R N Y+ PW L K R
Sbjct: 407 DESLIQLIKDLPGTADHYYLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVK---TDPER 463
Query: 742 ASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLVQFLPTGHKIG 801
TVL I + + +LLLSP +P + I LG + + +P G ++G
Sbjct: 464 LRTVLYITLEGVRVTTLLLSPILPRKSVVIFDMLGVPEVHRKGIENFEFGA-VPPGTRLG 522
Query: 802 T---PAPLFRKIEQAQVDEWK 819
LF K + K
Sbjct: 523 PAVEGEVLFSKRS---TENTK 540
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase,
structural genomics, NPPSFA; 1.80A {Thermus
thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A
2d54_A
Length = 500
Score = 280 bits (718), Expect = 2e-83
Identities = 123/549 (22%), Positives = 211/549 (38%), Gaps = 80/549 (14%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGL 344
+T+ + YVN PHLG+ + AD +R+ RL T +++GTDE+G A G
Sbjct: 7 VTTPIYYVNAEPHLGHAY-TTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGE 65
Query: 345 TPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASVEQL 404
P+ D+ + ++ I +D F RT+ + ++VQ + +V++AG E L
Sbjct: 66 DPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEGL 125
Query: 405 HCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTVKSS 464
+C C+RF ++ EL++ C + +
Sbjct: 126 YCVSCERFYTEK-----------------------------ELVEGLCPIHGRPVERRKE 156
Query: 465 TQLFLELPKIEDKLQSWVSETSDQWSSNAR---VICKAWLKDGLKPRCITRD---LKWGI 518
F + K LQ ++ E D V+ A L + + I+R + WGI
Sbjct: 157 GNYFFRMEKYRPWLQEYIQENPDLIRPEGYRNEVL--AMLAEPIGDLSISRPKSRVPWGI 214
Query: 519 PVPLPGFENKYSL----------------SSSPSLVQFLPTATPQSKITLYQFMAKDNVP 562
P+P ++ + + F P A + + KD +
Sbjct: 215 PLP---WDENHVTFVWFDALLNYVSALDYPEGEAYRTFWPHA--------WHLIGKDILK 263
Query: 563 FHSIMFPATLVAAGDQYTKVNHIMATEYLNYEDG-KFSKSRGTGVFGNNAKDT-GLPADI 620
H++ +P L AAG + H+ +L DG K SK+ G V + G D
Sbjct: 264 PHAVFWPTMLKAAGIPMYR--HLNVGGFLLGPDGRKMSKTLGNVVDPFALLEKYGR--DA 319
Query: 621 FRFYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINRALSFIEKNYGSTIPEISPIH 680
R+YLL P QDT S + L T+ ++L ++LGN + R + + + IPE
Sbjct: 320 LRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQRTRAMLFRFAEGRIPEPV--- 376
Query: 681 EDFLLLALINRELSAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLFKGSPEQKS 740
LA ++ + K + + + N+Y+ ++PW LFK ++
Sbjct: 377 -AGEELAEGTGLAGRLRPLVRELKFHVALEEAMAYVKALNRYINEKKPWELFK---KEPE 432
Query: 741 RASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLVQFLPTGHKI 800
A VL + + + S+LL+P MP + + LG +
Sbjct: 433 EARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEVRLEEAERW--GLAEPRPIP 490
Query: 801 GTPAPLFRK 809
LF K
Sbjct: 491 EEAPVLFPK 499
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase,
tRNA ligase metrs, methionine, translation, ATP-binding;
HET: ME8; 2.00A {Leishmania major}
Length = 564
Score = 281 bits (720), Expect = 6e-83
Identities = 112/584 (19%), Positives = 208/584 (35%), Gaps = 81/584 (13%)
Query: 266 PLRTRTAPVLPQPNENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYV 325
L +T + T+ + YVN PH+G++ L DV R+ R+ +
Sbjct: 11 TLEAQTQGPGSMKKQKVFFATTPIYYVNASPHIGHVY-STLIVDVLGRYHRVKGEEVFVM 69
Query: 326 SGTDEYGTATETKALEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQH 385
+GTDE+G A ++G++P + ++ ++ D +YF RT+ P ++VQ
Sbjct: 70 TGTDEHGQKVAEAAAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQD 129
Query: 386 LFDRVHKAGFTSSASVEQLHCAQCDRFLADR-FVEGVCPKCRYEDARGDQCDGCGQLINA 444
++ ++ G E + + FL + +GV +
Sbjct: 130 IWKKLAAKGDIYLGKYEGWYSVSDESFLTAQNVADGVDRDGK------------------ 171
Query: 445 IELIQPRCKQCSQAPTVKSSTQLFLELPKIEDKLQSWVSETSDQWSSNAR---VICKAWL 501
+ T L ++L + + + R VI +
Sbjct: 172 ---PCKVSLESGHVVTWVEEENYMFRLSAFRERLLKYFHDHPNCIVPEFRRREVI--KTV 226
Query: 502 KDGLKPRCITRD----LKWGIPVPLPGFENKY-------------SLSSSPSLVQFLPTA 544
+ GL I+R + W IPVP + ++ + + + T
Sbjct: 227 EKGLFDLSISRKRESVMNWSIPVP---GDERHCIYVWLDALFNYYTGALTRVATDGTETL 283
Query: 545 TPQSKITLY-----QFMAKDNVPFHSIMFPATLVAAGDQYTKVNHIMATEYLNYEDGKFS 599
+ KD + FH+I +PA L++A + +++ + + K S
Sbjct: 284 DEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSAELPLPE--RLVSHGWWTKDHKKIS 341
Query: 600 KSRGTGV--------FGNNAKDTGLPADIFRFYLLYVRPENQDTSFSWQDLATKNNSELL 651
KS G FG D +++L+ D +S +++ + N EL
Sbjct: 342 KSLGNAFDPVEKAKEFG---------IDALKYFLMRESNFQDDGDYSDKNMVARLNGELA 392
Query: 652 NNLGNFINRALSFIEKNYGSTIPEISPIHE-DFLLLALINRELSAYYSVLDKAKLRDGIR 710
+ LGN ++R ++ N PE + E D L+A +N ++ +
Sbjct: 393 DTLGNLVSRCVAPK-INVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYYCLPDIQHALI 451
Query: 711 YILNISRYCNQYMQTQQPWVLFKGSPEQKSRASTVLGILCQVSYLLSLLLSPYMPSTAST 770
I ++ R N Y+ PW L K +R TVL + + + ++ L P MP A
Sbjct: 452 AIFDVLRSLNAYVTENAPWKLVK---MDTARLGTVLYVTMEGLRICTMFLQPVMPQKAKE 508
Query: 771 IASQLGASHLKYSLSSSPSLVQFLPTGHKIGT---PAPLFRKIE 811
I LG + + G KI +F+K+
Sbjct: 509 IMDALGVPEAARVGMENYLFGI-VKPGTKIAGLAEGQVVFQKVT 551
>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis,
GST-like, translation; 3.00A {Saccharomyces cerevisiae}
SCOP: a.45.1.1 c.47.1.5
Length = 219
Score = 88.7 bits (220), Expect = 6e-20
Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 32/198 (16%)
Query: 9 NVQTLKLLITAEFSTTKLDVELVDV---ADARLLLS--KTVPVLELDDGSQLFSANQSCL 63
N + + KLDV++V A+ K VP G +L A
Sbjct: 9 NFRIRTWVPRGLVKALKLDVKVVTPDAAAEQFARDFPLKKVPAFVGPKGYKLTEAMAINY 68
Query: 64 YLSKF---------------DTKNESAINQWLEWESVELFPSVLSFF--------DNPKV 100
YL K D ++ I +W + +L + + N K
Sbjct: 69 YLVKLSQDDKMKTQLLGADDDLNAQAQIIRWQSLANSDLCIQIANTIVPLKGGAPYNKKS 128
Query: 101 LP---DNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNI 156
+ D + +++ + N +L + ++AD+ + + + I
Sbjct: 129 VDSAMDAVDKIVDIFENRLKNYTYLATENISLADLVAASIFTRYFESLFGTEWRAQHPAI 188
Query: 157 TPWYDRISKLPQVQKALK 174
W++ + P ++ K
Sbjct: 189 VRWFNTVRASPFLKDEYK 206
>2uz8_A Eukaryotic translation elongation factor 1 epsilon-1; protein
biosynthesis, aminoacyl-tRNA synthetase, GST, nuclear
protein, RNA-binding protein; HET: MSE; 2.0A {Homo
sapiens}
Length = 174
Score = 85.6 bits (212), Expect = 2e-19
Identities = 32/166 (19%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 19 AEFSTTKLDVELVDVADARLLLSKTVPVLELDDGSQLFSANQSCLYLSKF---------D 69
AE S + + L + +PVL+ ++G L +L K
Sbjct: 5 AELSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLMGLTTIAAHLVKQANKEYLLGST 64
Query: 70 TKNESAINQWLEWESVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAISNS-FLIENSTTV 128
+ ++ + QWLE+ ++ + +++ T L LN + + +L + T+
Sbjct: 65 AEEKAMVQQWLEYRVTQV---------DGHSSKNDIHTLLMDLNSYLEDKVYLTGYNFTL 115
Query: 129 ADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
ADI ++ ++ + D V+ Y N++ W+ I P +++ L
Sbjct: 116 ADILLYYGLHRFIVDLTVQEK-EKYLNVSRWFCHIQHYPGIRQHLS 160
>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase,
transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae}
PDB: 3erf_A* 3erg_A*
Length = 233
Score = 75.4 bits (186), Expect = 3e-15
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 29/159 (18%)
Query: 43 TVPVLELDDGSQLFSANQSCLYL-SKFDTKN-------ESA-INQWLEWESVELFPSVLS 93
TVPVLELDDG+ + Y+ + T E I+ + +EL V
Sbjct: 71 TVPVLELDDGTLIAECTAITEYIDALDGTPTLTGKTPLEKGVIHMMNKRAELELLDPVSV 130
Query: 94 FFDNPKVLP-----------------DNLKTKLNVLNEAISNS-FLIENSTTVADICIWT 135
+F + D ++ + + ++ +S ++ADI +
Sbjct: 131 YFHHATPGLGPEVELYQNKEWGLRQRDKALHGMHYFDTVLRERPYVAGDSFSMADITVIA 190
Query: 136 CVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+ + + WY R+ + P V+K L+
Sbjct: 191 GLIFA--AIVKLQVPEECEALRAWYKRMQQRPSVKKLLE 227
>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification,
transferase-transfera inhibitor complex; HET: GGL CYW;
2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*
Length = 209
Score = 73.8 bits (182), Expect = 8e-15
Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 27/156 (17%)
Query: 43 TVPVLELDDGSQLFSANQSCLYL-SKF--------DTKNESAINQWLEWESVELFPSVLS 93
VP L+ D LF + C Y K + + + ++ W+E E+ + ++
Sbjct: 53 QVPALQ-DGDLYLFESRAICKYAARKNKPELLREGNLEEAAMVDVWIEVEANQYTAALNP 111
Query: 94 FFDNPKVLP---------------DNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCV 137
+ P + LK L V ++ +L + ++AD+ +
Sbjct: 112 ILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVT 171
Query: 138 YPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
L + + +L +Y ++ W+ + + P VQK
Sbjct: 172 LCLFA-TPYASVLDAYPHVKAWWSGLMERPSVQKVA 206
>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles
gambiae} PDB: 2il3_A* 2imk_A*
Length = 221
Score = 73.8 bits (182), Expect = 1e-14
Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 44/193 (22%)
Query: 14 KLLITAEFSTTKLDVELVDVADARLLLSK---------------TVPVLELDDGSQLFSA 58
+ +TA+ L++E + L T+PVL+ D+G+ + +
Sbjct: 17 AVELTAKA--LGLELEQKTIN-----LLTGDHLKPEFVKLNPQHTIPVLD-DNGTIITES 68
Query: 59 NQSCLYL-SKF---------DTKNESAINQWLEWESVELFPSVLSFF---------DNPK 99
+ +YL +K+ D ++ +N L +ES LF + F D P+
Sbjct: 69 HAIMIYLVTKYGKDDSLYPKDPVKQARVNSALHFESGVLFARMRFIFERILFFGKSDIPE 128
Query: 100 VLPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPW 159
+ ++ +L + + + F+ + T+AD + + ++ + S + I W
Sbjct: 129 DRVEYVQKSYELLEDTLVDDFVAGPTMTIADFSCISTISSIMGVVPLE--QSKHPRIYAW 186
Query: 160 YDRISKLPQVQKA 172
DR+ +LP ++A
Sbjct: 187 IDRLKQLPYYEEA 199
>4g9h_A Glutathione S-transferase; GST, enzyme function initiative,
structural genomics; HET: GSH; 2.10A {Yersinia pestis}
Length = 211
Score = 71.5 bits (176), Expect = 5e-14
Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 26/151 (17%)
Query: 44 VPVLELDDGSQLFSANQS---CLYL-SKF---------DTKNESAINQWLEWESVELFPS 90
VP L LDDGS L + YL K T + +WL + + EL
Sbjct: 55 VPALVLDDGSLLT---EGVAIVQYLADKVPDRHLIAPSGTLSRYHAIEWLNFIATELHKG 111
Query: 91 VLSFF------DNPKVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSD 143
F + ++ + L + + ++ ++ +L+ +VAD ++T
Sbjct: 112 FSPLFNPNTPDEYKTIVRERLDKQFSYVDSVLAEHDYLLGKKFSVADAYLFTVSRWA--- 168
Query: 144 SKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+ + + +++ + R+++ P V+ AL
Sbjct: 169 NALNLQIKERSHLDQYMARVAERPAVKAALA 199
>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP:
a.45.1.1 c.47.1.5 PDB: 1a0f_A*
Length = 201
Score = 71.1 bits (175), Expect = 5e-14
Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 26/151 (17%)
Query: 44 VPVLELDDGSQLFSANQS---CLYL-SKF---------DTKNESAINQWLEWESVELFPS 90
VP L LDDG+ L + YL ++ + +WL + + EL
Sbjct: 52 VPALLLDDGTLLT---EGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIATELHKG 108
Query: 91 VLSFF------DNPKVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSD 143
F + + L+ KL +NEA+ + ++ T+AD ++T +
Sbjct: 109 FTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFTVLRWA--- 165
Query: 144 SKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
V+ L +I + R+++ P+VQ AL
Sbjct: 166 YAVKLNLEGLEHIAAFMQRMAERPEVQDALS 196
>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia
xenovorans} PDB: 2gdr_A*
Length = 203
Score = 70.0 bits (172), Expect = 1e-13
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 26/151 (17%)
Query: 44 VPVLELDDGSQLFSANQS---CLYL------SKF----DTKNESAINQWLEWESVELFPS 90
VP L+LDDG L + Y+ + + + QWL + S EL S
Sbjct: 52 VPCLQLDDGRTLT---EGPAIVQYVADQVPGKQLAPANGSFERYHLQQWLNFISSELHKS 108
Query: 91 VLSFF------DNPKVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSD 143
F + + +L T+L + + ++ +L+ + +VADI ++ +
Sbjct: 109 FSPLFNPASSDEWKNAVRQSLNTRLGQVARQLEHAPYLLGDQLSVADIYLFVVLGWS--- 165
Query: 144 SKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+ V LS + ++ + R+ VQ AL+
Sbjct: 166 AYVNIDLSPWPSLQAFQGRVGGREAVQSALR 196
>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A
{Bombyx mori}
Length = 216
Score = 69.9 bits (172), Expect = 2e-13
Identities = 40/201 (19%), Positives = 83/201 (41%), Gaps = 39/201 (19%)
Query: 14 KLLITAEFSTTKLDVELVDV--------ADARLLLS--KTVPVLELDDGSQLFSANQSCL 63
L+ A + +++ V ++ L L+ VP L+ D+ L+ +
Sbjct: 17 GALLAARA--IGIPIQIEIVNLFKKEQLQESFLKLNPQHCVPTLD-DNNFVLWESRAIAC 73
Query: 64 YL-SKF---------DTKNESAINQWLEWESVELFPSVLS-----FFDNPKVLPDNLKTK 108
YL K+ D + + +NQ L ++S L+ + + F + +LK
Sbjct: 74 YLADKYGKDDQWYPKDLQKRAVVNQRLYFDSASLYVKIRAICFPILFLGETEIKQSLKDD 133
Query: 109 ----LNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRI 163
L+ LN+ + + ++ + T+AD I+ + +L+ V +SS+ NI W
Sbjct: 134 LNSTLSFLNQFLEKTKWVAADHPTIADTSIYASMSSILA---VGWDISSFPNIQRWIKDC 190
Query: 164 SKLP---QVQKALKTWTEVLK 181
LP + + +T+ + +K
Sbjct: 191 LLLPGAPENEDGARTFGDAVK 211
>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX;
2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5
PDB: 1bx9_A*
Length = 211
Score = 69.6 bits (171), Expect = 2e-13
Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 32/160 (20%)
Query: 43 TVPVLELDDGSQLFSANQSCLYL-SKFDTKNES-------------AINQWLEWESVELF 88
VP E D +LF + Y+ +++ + + + ++ E +
Sbjct: 53 QVPAFE-DGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFD 111
Query: 89 PSVLSFFDNPKVLP---------------DNLKTKLNVLNEAISNS-FLIENSTTVADIC 132
P L L+V + +L + T+ D+
Sbjct: 112 PVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLH 171
Query: 133 IWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKA 172
+ L + + L + + W I+K P +K
Sbjct: 172 HIPAIQ-YLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 210
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 73.7 bits (180), Expect = 3e-13
Identities = 103/643 (16%), Positives = 185/643 (28%), Gaps = 202/643 (31%)
Query: 25 KLDVELVDVADA-RLLLSKTVPVLELDDGSQLFSANQSCLYLSKFDT---KNESAINQWL 80
+ + DV D + +LSK E+D A L L F T K E + +++
Sbjct: 30 VDNFDCKDVQDMPKSILSKE----EIDHIIMSKDAVSGTLRL--FWTLLSKQEEMVQKFV 83
Query: 81 EWESVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPL 140
E + L+ L I + T I L
Sbjct: 84 E---------------------EVLRINYKFLMSPIKTEQRQPSMMTRMYI---EQRDRL 119
Query: 141 LSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL------------------KTW--TEVL 180
+D+ + + Y N++ R+ ++++AL KTW +V
Sbjct: 120 YNDN---QVFAKY-NVS----RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171
Query: 181 KGSANDVGSLSEALFSLSIAS-QSGNTVLNSLNKLAPLCKKSNKQQPESKAKPAAVVEDD 239
S + +F L++ + S TVL L KL + + + + +
Sbjct: 172 L-SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 240 -------LSSKSK--------DVTSEEIEQTKVAWTQGSPVPLRTRTAPV---------- 274
L SK +V + + A+ + L TR V
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWN---AFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 275 ----------LPQPNENNILI------TSALPY--VNNVPHLGNIIGCVLSADVFSRFCR 316
L ++L+ LP + P +II + D + +
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR-DGLATW-- 344
Query: 317 LVNRNTLYVSGTDEYGTATETKALEEGLTPRQICDKY--FAIHRE-------VYE--WFE 365
N +V D+ T E +L L P + + ++ + WF+
Sbjct: 345 ---DNWKHV-NCDKLTTIIE-SSLNV-LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 366 IDFDYFGRTSTPQQTEIVQHLFDR--VHKAGFTSSASVEQLH---CAQCDRFLA--DRFV 418
+ +V L V K S+ S+ ++ + + A V
Sbjct: 399 VIKS------DVM--VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV 450
Query: 419 EGVCPKCRYEDARGDQCDGCGQLIN--------AIELIQPRCKQCSQAPTVKSSTQLFLE 470
+ Y + D L K + +FL+
Sbjct: 451 D------HYNIPKTFDSDDLIPPYLDQYFYSHIGHHL-----KNIEHPERMTLFRMVFLD 499
Query: 471 LPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGIPVPLPGFENKYS 530
+E K++ S W+ + + L+ LK F Y
Sbjct: 500 FRFLEQKIRH----DSTAWN------ASGSILNTLQ------QLK---------FYKPYI 534
Query: 531 LSSSP-------SLVQFLPTATPQ---SKIT-LYQ--FMAKDN 560
+ P +++ FLP SK T L + MA+D
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDE 577
Score = 50.6 bits (120), Expect = 3e-06
Identities = 58/411 (14%), Positives = 118/411 (28%), Gaps = 114/411 (27%)
Query: 2 KCL------SNRNNVQTL----KLLITAEFSTTKLDVELVDVADARLLLSKTVPVLELDD 51
CL N K+L+T T+ ++ D L + T + LD
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLT-----TR-FKQVTDF-----LSAATTTHISLDH 293
Query: 52 GSQLFSANQSCLYLSKF-DTKNESAINQWLEWESVELFPSVLSFF-----DNPKVLPDNL 105
S + ++ L K+ D + + L E + P LS D DN
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQD-----LPREVLTTNPRRLSIIAESIRDGLA-TWDNW 347
Query: 106 KT-KLNVLNEAISNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRIS 164
K + L I +S + L ++ R + + + P +
Sbjct: 348 KHVNCDKLTTIIESS--LNV----------------LEPAEYRKMFDRLS-VFP-PS--A 385
Query: 165 KLP-QVQKALKTWTEVLKGSANDVGSLSEALFSLSIASQSGNTVLNSLNKLAPLCKKSNK 223
+P + + W +V+K +DV + L S+ + S+ + +
Sbjct: 386 HIPTILLSLI--WFDVIK---SDVMVVVNKLHKYSLVEKQPKESTISIPSIY---LELKV 437
Query: 224 QQPESKAKPAAVVEDDLSSKSKDVTSEEIEQTKVAWTQGSPVPLRTRTAPVLPQPNENNI 283
+ A ++V+ K+ D +P +
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDL------------------------IPPYLDQYF 473
Query: 284 LITSALPYVNNVPHLGNIIGCVLSADVFSRFCRL-VN----RNTLYVSGTDEYGTATETK 338
S + + HL NI + + F + ++ + T + +
Sbjct: 474 Y--SHIGH-----HLKNI----EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522
Query: 339 ALEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQ-----QTEIVQ 384
L++ + Y + YE F T++++
Sbjct: 523 TLQQLKFYK----PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR 569
Score = 50.2 bits (119), Expect = 5e-06
Identities = 58/416 (13%), Positives = 120/416 (28%), Gaps = 108/416 (25%)
Query: 680 HEDFLL--LALINREL-----SAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLF 732
H DF +++ A+ D ++D + IL+ + +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILS-KEEIDHIIM-------- 56
Query: 733 KGSPEQKSRASTVLGILCQ-----VSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSS 787
S + S + L V + +L S I ++
Sbjct: 57 --SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTE----------QRQ 104
Query: 788 PSL--VQFLPTGHKIGTPAPLFRK---------------IEQAQVDEWKLKYG----GQQ 826
PS+ ++ ++ +F K + + + + L G G+
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT 164
Query: 827 --NKESSNNKKEKKQAE-----ITFSSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVD 879
+ + K + + + + + E + L+ Q+ + W D
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN------WTSRSD 218
Query: 880 KLLSLKKQLEAMKSQQRAATDANQTSATPSAS-----DNSADVKALEA-EIEKQAEVVRT 933
++K ++ +++++ R + P + N + KA A + +
Sbjct: 219 HSSNIKLRIHSIQAELR-----RLLKSKPYENCLLVLLNVQNAKAWNAFNLS-----CKI 268
Query: 934 LKASAGGDKSVF---AADLAKLLSLKQQLSALTGTTGTTNNTKCNNSSKNSSSHKIGTPA 990
L + K V +A +SL LT + K + ++ T
Sbjct: 269 LLTTR--FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 991 PL-------FRKIEQAQVDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAA 1039
P + A D WK N + K I SS+ LE A
Sbjct: 327 PRRLSIIAESIRDGLATWDNWK-----HVNCD--------KLTTIIESSLNVLEPA 369
Score = 32.9 bits (74), Expect = 0.71
Identities = 35/250 (14%), Positives = 83/250 (33%), Gaps = 44/250 (17%)
Query: 925 EKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTGTTGTTNNTKCNNSSKNSSSH 984
KQ E+V+ F + + ++Q S +T + N++ + +
Sbjct: 73 SKQEEMVQKFVEEVLRINYKFLMS--PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN 130
Query: 985 KIGTPAP---LFRKIEQAQVDEWKLKYG----GQQ--NKESSNNKKEKKQAE-----ITF 1030
+ P L + + + + + L G G+ + + K + + + +
Sbjct: 131 -VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL 189
Query: 1031 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQT 1090
+ E + L+ Q+ + W D ++K ++ +++++ R
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPN------WTSRSDHSSNIKLRIHSIQAELR-----RLL 238
Query: 1091 SATPSAS-----DNSADVKALEA-EIEKQAEVVRTLKASAGGDKSIF---AADLAKLLSL 1141
+ P + N + KA A + + L + K + +A +SL
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLS-----CKILLTTR--FKQVTDFLSAATTTHISL 291
Query: 1142 KQQLSALTGD 1151
LT D
Sbjct: 292 DHHSMTLTPD 301
>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating,
A putative oxidoreduct; HET: GSH; 2.50A {Proteus
mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*
Length = 203
Score = 68.8 bits (169), Expect = 3e-13
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 26/151 (17%)
Query: 44 VPVLELDDGSQLFSANQS---CLYL-SKF---------DTKNESAINQWLEWESVELFPS 90
VPVL+LD+G L + YL +WL + + E+
Sbjct: 52 VPVLQLDNGDILT---EGVAIVQYLADLKPDRNLIAPPKALERYHQIEWLNFLASEVHKG 108
Query: 91 VLSFF------DNPKVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSD 143
F V+ + LK+K +N+ +S + + TVAD ++T
Sbjct: 109 YSPLFSSDTPESYLPVVKNKLKSKFVYINDVLSKQKCVCGDHFTVADAYLFTLSQWA--- 165
Query: 144 SKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
V L+ +++ + RI++ P V AL
Sbjct: 166 PHVALDLTDLSHLQDYLARIAQRPNVHSALV 196
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein
structure initiative, N SGX research center for
structural genomics; HET: GSH; 1.75A {Pseudomonas
fluorescens}
Length = 210
Score = 68.4 bits (168), Expect = 5e-13
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 27/153 (17%)
Query: 44 VPVLELDDGSQLFSANQSCLYL---SKF---DTKNESAINQWLEWE--SVELFPSVLSFF 95
+PVLEL+DG+ L+ +N +L S+F + + + + QW +E S E + +V F
Sbjct: 55 IPVLELEDGTCLWESNAILNFLADGSQFLPSEPRLRTQVLQWQFFEQYSHEPYIAVARFI 114
Query: 96 DNPKVLPDNLKTKLN-----------VLNEAISNS-FLIENSTTVADICI--WTCVYPLL 141
+ LP+ + + V+ + +S + +L+ ++ADI + +T V
Sbjct: 115 QLYEGLPEERREEYLKLHKRGYKALDVMEKQLSRTPYLVGEHYSIADIALYAYTHVADEG 174
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
LS Y I W R+ P+ L
Sbjct: 175 GFD-----LSRYPGIQAWMQRVQSHPRHVPMLD 202
>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea
mays} SCOP: a.45.1.1 c.47.1.5
Length = 216
Score = 68.4 bits (168), Expect = 6e-13
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 28/156 (17%)
Query: 44 VPVLELDDGSQLFSANQSCLYL-SKF---------DTKNESAINQWLEWESVELFPSV-- 91
+P L D LF + Y+ SK+ T + + + WLE ES +P+
Sbjct: 54 IPALV-DGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFYPNASP 112
Query: 92 ----LSFFDNPKVLPD---------NLKTKLNVLNEAISNS-FLIENSTTVADICIWTCV 137
L PD L L+V ++ + +L + T+AD + +
Sbjct: 113 LVFQLLVRPLLGGAPDAAVVDKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHASYL 172
Query: 138 YPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
L K L+++ ++ W++ I P QK +
Sbjct: 173 LYLSKTPKAG-LVAARPHVKAWWEAIVARPAFQKTV 207
>1f2e_A Glutathione S-transferase; GST complexed with glutathione,
thioredoxin superfamily fold transferase; HET: GSH;
2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1
c.47.1.5
Length = 201
Score = 68.0 bits (167), Expect = 6e-13
Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 28/152 (18%)
Query: 44 VPVLELDDGSQLFSANQS---CLYL------SKF----DTKNESAINQWLEWESVELFPS 90
VP L LD G L ++ LY+ S + + + L + E +
Sbjct: 52 VPALTLDSGETLT---ENPAILLYIADQNPASGLAPAEGSLDRYRLLSRLSFLGSEFHKA 108
Query: 91 VLSFFDNPKVLPD-------NLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLS 142
+ F P + ++K L L++ ++ N+ +VADI ++ +
Sbjct: 109 FVPLF-APATSDEAKAAAAESVKNHLAALDKELAGRDHYAGNAFSVADIYLYVMLGWP-- 165
Query: 143 DSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+ V +++Y + + +I++ P V ALK
Sbjct: 166 -AYVGIDMAAYPALGAYAGKIAQRPAVGAALK 196
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics,
protein structure initiative, nysgxrc; 2.04A
{Rhodopseudomonas palustris}
Length = 225
Score = 67.3 bits (165), Expect = 1e-12
Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 28/155 (18%)
Query: 44 VPVLELDDGSQLFSANQSCLYL---SKF---DTKNESAINQWLEWESVELFPS--VLSFF 95
VP+LE G L +N YL + + + QW+ +E L P+ F+
Sbjct: 55 VPLLETAPGRYLAESNAILWYLAVGTSLAPDTRMDRAEALQWMFFEQHALEPNIGSAYFW 114
Query: 96 -----DNPKVLPDNLKTK-------LNVLNEAISNS-FLIENSTTVADICI--WTCVYPL 140
+ L+ L V+ + + + T+ADI + +T V
Sbjct: 115 LCLVKGGRDLQTHALEDWLERGYAALQVMENHLKTNDYFAAGQLTIADIALYGYTHVADQ 174
Query: 141 LSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
LS++ + W R+ + P T
Sbjct: 175 CDFD-----LSTFPAVNAWLRRVEQTPGFITMDWT 204
>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo
sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*
Length = 244
Score = 66.2 bits (162), Expect = 5e-12
Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 52/210 (24%)
Query: 14 KLLITAEFSTTKLDVELVDVADARLLLSK---------------TVPVLELDDGSQLFSA 58
+ I A+ + +EL V L K +P L+ D L +
Sbjct: 16 AVYIFAKK--NGIPLELRTVD-----LVKGQHKSKEFLQINSLGKLPTLK-DGDFILTES 67
Query: 59 NQSCLYL-SKF---------DTKNESAINQWLEWESVELFPSVLSFFDNPKVLP------ 102
+ +YL K+ D + + ++++L W + + + + P
Sbjct: 68 SAILIYLSCKYQTPDHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVLGPLIGVQV 127
Query: 103 ---------DNLKTKLNVLNEAI--SNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLS 151
+ L L + FL T+AD+ + + L
Sbjct: 128 PEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQP--VALGYELFE 185
Query: 152 SYTNITPWYDRISKLPQVQKALKTWTEVLK 181
+ W R+ + + + +L
Sbjct: 186 GRPRLAAWRGRVEAFLGAELCQEAHSIILS 215
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase,
detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles
dirus} SCOP: a.45.1.1 c.47.1.5
Length = 210
Score = 65.3 bits (160), Expect = 6e-12
Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 38/198 (19%)
Query: 14 KLLITAEFSTTKLDVELVDVA-------DARLLLS--KTVPVLELDDGSQLFSANQSCLY 64
++ A+ + + L DA L+ T+P L D+G ++ + LY
Sbjct: 14 SAILLAKK--LGITLNLKKTNVHDPVERDALTKLNPQHTIPTLV-DNGHVVWESYAIVLY 70
Query: 65 L-SKF---------DTKNESAINQWLEWESVELFPSVLS----FFDNPKVLP---DNLKT 107
L + D K S +NQ L ++ L+ ++ + + LK
Sbjct: 71 LVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKG 130
Query: 108 KLNVLNEAISNS-FLIENSTTVADICI--WTCVYPLLSDSKVRPLLSSYTNITPWYDRI- 163
L++L + ++ + + TVADIC+ L L + +I W +R+
Sbjct: 131 ALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHD-----LEPFPHIRAWLERVR 185
Query: 164 SKLPQVQKALKTWTEVLK 181
+++P ++ K +
Sbjct: 186 AEMPDYEEFSKQVADDTL 203
>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST;
HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A*
3f6f_A 3gh6_A* 1jlv_A*
Length = 209
Score = 64.5 bits (158), Expect = 1e-11
Identities = 37/202 (18%), Positives = 73/202 (36%), Gaps = 41/202 (20%)
Query: 14 KLLITAEFSTTKLDVELVDV--------ADARLLLS--KTVPVLELDDGSQLFSANQSCL 63
+++TA+ +++ + L ++ T+P L D+G L+ + +
Sbjct: 15 SVIMTAKA--VGVELNKKLLNLQAGEHLKPEFLKINPQHTIPTLV-DNGFALWESRAIQV 71
Query: 64 YL-SKF---------DTKNESAINQWLEWESVELFPSVLS-----FFDNPKVLP---DNL 105
YL K+ K + INQ L ++ L+ S + F P +
Sbjct: 72 YLVEKYGKTDSLYPKCPKKRAVINQRLYFDMGTLYQSFANYYYPQVFAKAPADPEAFKKI 131
Query: 106 KTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPL-LSSYTNITPWYDRI 163
+ LN + + +S TVADI + V +V +S Y N+ WY+
Sbjct: 132 EAAFEFLNTFLEGQDYAAGDSLTVADIALVATVSTF----EVAKFEISKYANVNRWYENA 187
Query: 164 SKLP----QVQKALKTWTEVLK 181
K+ + + + +
Sbjct: 188 KKVTPGWEENWAGCLEFKKYFE 209
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula
elliptica} PDB: 3qaw_A*
Length = 243
Score = 65.0 bits (159), Expect = 1e-11
Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 33/157 (21%)
Query: 43 TVPVLELDDGSQLFSANQS---CLYL-SKF--------DTKNESAINQWLEWESVELFPS 90
VP D + +S C+YL K+ DT + + Q + +E+ + +
Sbjct: 77 QVPTFT-DGDVVVN---ESTAICMYLEEKYPKVPLFPSDTTIRAKVYQRM-FETSNISTN 131
Query: 91 VLSFFDNPKVLP------------DNLKTKLNVLNEAISNS--FLIENSTTVADICIWTC 136
V+ F D +L + + F+ T+AD+ +
Sbjct: 132 VMEFVQYKMKNKDSIDQVLLKEKKDKAHVELGHWENYLKQTGGFVATKEFTMADVFFFPM 191
Query: 137 VYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
V + + L SY NI +Y+ + P + K +
Sbjct: 192 VALI--VRQGANLKDSYPNIFKYYNMMMDRPTIVKTM 226
>2c3n_A Glutathione S-transferase theta 1; glutathione transferase,
polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A
Length = 247
Score = 64.7 bits (158), Expect = 2e-11
Identities = 29/168 (17%), Positives = 54/168 (32%), Gaps = 31/168 (18%)
Query: 42 KTVPVLELDDGSQLFSANQSCLYL-SKF---------DTKNESAINQWLEWESVELFPSV 91
K VP L+ D L + LYL K+ D + + ++++L W+ L S
Sbjct: 59 KKVPALK-DGDFTLTESVAILLYLTRKYKVPDYWYPQDLQARARVDEYLAWQHTTLRRSC 117
Query: 92 LSFFDNPKVLP----------------DNLKTKLNVLNEAI--SNSFLIENSTTVADICI 133
L + + P L L +L + + +FL ++AD+
Sbjct: 118 LRALWHKVMFPVFLGEPVSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVA 177
Query: 134 WTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTWTEVLK 181
T + + + W R+ + +LK
Sbjct: 178 ITELMHP--VGAGCQVFEGRPKLATWRQRVEAAVGEDLFQEAHEVILK 223
>2djv_A Methionyl-tRNA synthetase; EC 6.1.1.10, WHEP-TRS domain, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 59.7 bits (144), Expect = 3e-11
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 845 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQT 904
++ L V QGN+VR++K+ +K+E V KLL LKKQL + + A +
Sbjct: 13 QQIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPEAPKGKKK 72
Query: 905 SATPSA 910
+ PS+
Sbjct: 73 KSGPSS 78
Score = 59.7 bits (144), Expect = 3e-11
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 1031 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQT 1090
++ L V QGN+VR++K+ +K+E V KLL LKKQL + + A +
Sbjct: 13 QQIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPEAPKGKKK 72
Query: 1091 SATPSA 1096
+ PS+
Sbjct: 73 KSGPSS 78
Score = 54.7 bits (131), Expect = 2e-09
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 904 TSATPSASDNSADVKALEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALT 963
+S + + ++AL E+ KQ +VR LKA DK+ AA++AKLL LK+QL+
Sbjct: 2 SSGSSGTTAKPQQIQALMDEVTKQGNIVRELKAQ-KADKNEVAAEVAKLLDLKKQLAVAE 60
Query: 964 GTTGTTNNTKCNNSSKNS 981
G K S +S
Sbjct: 61 GKPPEAPKGKKKKSGPSS 78
Score = 53.5 bits (128), Expect = 4e-09
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 1090 TSATPSASDNSADVKALEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSALT 1149
+S + + ++AL E+ KQ +VR LKA DK+ AA++AKLL LK+QL+
Sbjct: 2 SSGSSGTTAKPQQIQALMDEVTKQGNIVRELKAQ-KADKNEVAAEVAKLLDLKKQLAVAE 60
Query: 1150 GDTGTTNNTKPNHSSKNS 1167
G K S +S
Sbjct: 61 GKPPEAPKGKKKKSGPSS 78
>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP:
a.45.1.1 c.47.1.5
Length = 221
Score = 63.4 bits (155), Expect = 3e-11
Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 32/157 (20%)
Query: 43 TVPVLELDDGSQLFSANQS---CLYL-SKF--------DTKNESAINQWLEWESVELFP- 89
TVP L D + S +YL K+ D + Q + + P
Sbjct: 59 TVPALV-DGDVVIN---DSFAIIMYLDEKYPEPPLLPRDLHKRAVNYQAMSIVLSGIQPH 114
Query: 90 ---SVLSFFDNPKVLPDNLK----------TKLNVLNEAISNSFLIENSTTVADICIWTC 136
+V+ + + + + T L L + + +AD+ +
Sbjct: 115 QNLAVIRYIEEKINVEEKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQ 174
Query: 137 VYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
++ ++ ++ + Y + Y+ ++LP Q AL
Sbjct: 175 IHGAINRFQIN--MEPYPTLAKCYESYNELPAFQNAL 209
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 67.0 bits (163), Expect = 4e-11
Identities = 115/681 (16%), Positives = 199/681 (29%), Gaps = 259/681 (38%)
Query: 31 VDVADAR-LLLSK-------TVPVLELDDGSQLFSANQSCLYLSKF-DTKNESAINQWLE 81
+D R L LS VP + F A+Q L +F E +
Sbjct: 1 MDAYSTRPLTLSHGSLEHVLLVPT------ASFFIASQ--LQ-EQFNKILPEPTEGFAAD 51
Query: 82 WE---SVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAIS---NSFLIENSTTVADICIWT 135
E EL L + + V P + VLN ++ N +L N DI
Sbjct: 52 DEPTTPAELVGKFLGYVSS-LVEPSKVGQFDQVLNLCLTEFENCYLEGN-----DI--HA 103
Query: 136 CVYPLLSDS-----KVRPLLSSYTNITPWYDR-ISKLPQVQKALKTWTEVLKGSANDVGS 189
LL ++ K + L+ +Y R K AL + V +G+A V
Sbjct: 104 LAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSN--SAL--FRAVGEGNAQLV-- 157
Query: 190 LSEALFSLSIASQSGNTV-----LNSLNK-----LAPLCKKSNKQ-QPESKAKPAAVVED 238
A+F Q GNT L L + + L K S + + A +
Sbjct: 158 ---AIF----GGQ-GNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDA---E 206
Query: 239 DLSSKSKDVTSEEIEQTKVAWTQGSPVPLRTRTAPVLPQPNENNILITSALPYVNNVPHL 298
+ ++ ++ + W L + P++ Y+ ++P
Sbjct: 207 KVFTQGLNI---------LEW-------LENPS----NTPDK---------DYLLSIPIS 237
Query: 299 GNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGLTPRQICDKYFAIHR 358
+IG V+ + +L+ G TP ++
Sbjct: 238 CPLIG-VIQLAHYVVTAKLL------------------------GFTPGEL--------- 263
Query: 359 EVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSA-SVEQLHCAQCDRFLADRF 417
Y + +T +V A + S E + + + F
Sbjct: 264 ---------RSYL-KGATGHSQGLVT--------AVAIAETDSWESFFVS-VRKAITVLF 304
Query: 418 VEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPT----VKSSTQLFLELPK 473
GV R + L +++ + P+ + + TQ
Sbjct: 305 FIGV---------RCYEAYPNTSL--PPSILEDSLENNEGVPSPMLSISNLTQ------- 346
Query: 474 IEDKLQSWVSETSDQWSSNARV-ICKAWLKDGLKPRC--ITRDLKWGIPVPLPGFENKY- 529
+++Q +V++T+ + +V I L +G + ++ G P L G
Sbjct: 347 --EQVQDYVNKTNSHLPAGKQVEIS---LVNG--AKNLVVS-----GPPQSLYGLNLTLR 394
Query: 530 SLSSSPSLVQ---------------FLPTATPQSKITLYQFMAKDNVPFHS-IMFPATLV 573
+ L Q FLP + PFHS ++ PA+ +
Sbjct: 395 KAKAPSGLDQSRIPFSERKLKFSNRFLP-------VA---------SPFHSHLLVPASDL 438
Query: 574 AAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIFRFYLLYVRPENQ 633
D L + F NAKD +P +Y
Sbjct: 439 INKD-------------LVKNNVSF-----------NAKDIQIP--------VY------ 460
Query: 634 DTSFSWQDLATKNNSELLNNL 654
DT F DL + S + +
Sbjct: 461 DT-FDGSDLRVLSGS-ISERI 479
Score = 62.0 bits (150), Expect = 1e-09
Identities = 72/405 (17%), Positives = 118/405 (29%), Gaps = 149/405 (36%)
Query: 29 ELVDVADARLL-LSKTVPVLELDDGSQLFSANQSCLYLSKFDTKNESAINQWLEWESVEL 87
+L+ + L L +T D ++F+ + I +WLE +
Sbjct: 186 DLIKFSAETLSELIRTTL-----DAEKVFTQG--------LN------ILEWLE--NPSN 224
Query: 88 FPSV-------LSFFDNP--------------KVL---PDNLKTKLN---------VLNE 114
P +S P K+L P L++ L V
Sbjct: 225 TPDKDYLLSIPISC---PLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAV 281
Query: 115 AIS-----NSFLIENSTTVADICIW-----TCVYP-------LLSDSKVR------PLLS 151
AI+ SF + + + YP +L DS P+LS
Sbjct: 282 AIAETDSWESFF-VSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS 340
Query: 152 SYTNITPWYDRISKLP--QVQKALKTWTEVLKGSANDVGSLSEALF-SLSIASQ----SG 204
IS L QVQ + N + + SL ++ SG
Sbjct: 341 -----------ISNLTQEQVQDYVN--------KTNSHLPAGKQVEISLVNGAKNLVVSG 381
Query: 205 NTV-LNSLN-KLAPLCKKSNKQQ---PESKAKPAAVVE---------DDLSSKSKDVTSE 250
L LN L S Q P S+ K L + D+ ++
Sbjct: 382 PPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINK 441
Query: 251 EIEQTKVAWTQGS---PVPLRTRTAPVLPQPNENNIL------ITSALPYVN-------N 294
++ + V++ PV T L + +I I LP V
Sbjct: 442 DLVKNNVSFNAKDIQIPV-YDTFDGSDL-RVLSGSISERIVDCIIR-LP-VKWETTTQFK 497
Query: 295 VPHL-----GNI--IGCVLSADVFSRFCRLVNRNTLYVSGTDEYG 332
H+ G +G + + R++ TL ++ D+YG
Sbjct: 498 ATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDINPDDDYG 542
Score = 60.4 bits (146), Expect = 3e-09
Identities = 91/550 (16%), Positives = 156/550 (28%), Gaps = 219/550 (39%)
Query: 464 STQ-LFLELPKIEDKLQSW-VSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGIPVP 521
ST+ L L +E V + + A L++ +P P
Sbjct: 5 STRPLTLSHGSLE---HVLLVP--TASFF-IASQ-----LQE---------QFNKILPEP 44
Query: 522 LPGFENKYSLSSSPSLV----QFLPTATPQSKITLY-------------QFMAKDNVPFH 564
GF ++ LV ++ + SK+ + ++ +++ H
Sbjct: 45 TEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDI--H 102
Query: 565 SIMFPATLVAAGDQ-----------YTKVNHIMATEYLNYEDGKFSKSRGTG------VF 607
+ A L+ D Y + + + ++ G G +F
Sbjct: 103 A--LAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIF 160
Query: 608 ---GNNAKDTGLP--ADIFRFYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINRAL 662
GN D D+++ Y + V DL K ++E L+ L R
Sbjct: 161 GGQGNT--DDYFEELRDLYQTYHVLV-----------GDL-IKFSAETLSELI----RTT 202
Query: 663 SFIEKNYGSTI--------PEISPIHEDFLLLALINRELSAYYSVLDKAKLRDGIRYILN 714
EK + + P +P +D+LL S S L I ++
Sbjct: 203 LDAEKVFTQGLNILEWLENPSNTP-DKDYLL--------SIPISC----PL---I-GVIQ 245
Query: 715 ISRYCNQYMQTQQPWVLFK--G-SPEQKSRASTVLGILCQVSYLLSLLLSPYMPSTASTI 771
++ Y V K G +P + + L + L++ + +
Sbjct: 246 LAHYV----------VTAKLLGFTPGE------LRSYLKGATGHSQGLVTAVAIAETDSW 289
Query: 772 AS-------------QLGA-SHLKYSLSS-SPSLVQ-FLPTGHKIGTPAPLF--RKIEQA 813
S +G + Y +S PS+++ L G P+P+ + Q
Sbjct: 290 ESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNE--GVPSPMLSISNLTQE 347
Query: 814 QVDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAAVATQGNLVRQVKSSGVEKSE 873
QV Y + N K Q EI + V NLV V SG +S
Sbjct: 348 QVQ----DYVNKTNSHLPAGK----QVEI---------SLVNGAKNLV--V--SGPPQS- 385
Query: 874 WQPHVDKLLSLKKQLEAMKSQQRAATDANQTSATPSASDNSADVKALEAEIEKQAEVVRT 933
L L L R
Sbjct: 386 -------LYGLNLTL-------------------------------------------RK 395
Query: 934 LKASAGGDKS 943
KA +G D+S
Sbjct: 396 AKAPSGLDQS 405
Score = 50.4 bits (120), Expect = 4e-06
Identities = 99/572 (17%), Positives = 166/572 (29%), Gaps = 181/572 (31%)
Query: 700 LDKAKLR-----DG-IRYILNISRYCNQYMQTQQPWVLFKGS-P----------EQKSRA 742
+D R G + ++L + + Q F P E + A
Sbjct: 1 MDAYSTRPLTLSHGSLEHVLLVPT--ASFFIASQLQEQFNKILPEPTEGFAADDEPTTPA 58
Query: 743 STVLGILCQVSY------------LLSLLL----SPYMPST-ASTIASQLGASHLKYSLS 785
V L VS +L+L L + Y+ +A++L + +L
Sbjct: 59 ELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDT-TLV 117
Query: 786 SSPSLVQ-FLPTGHKIGTPAP------LFRKIEQAQVDEWKLKY---GGQQNKESSNNK- 834
+ L++ ++ P LFR + + +L GGQ N +
Sbjct: 118 KTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNA---QL-VAIFGGQGN----TDDY 169
Query: 835 -KE-KKQAEITFSSVEEL-EAAVATQGNLVRQVKSS------GVEKSEW------QPHVD 879
+E + + V +L + + T L+R + G+ EW P D
Sbjct: 170 FEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKD 229
Query: 880 KLLSLKKQLEAMKS------QQRA--ATDANQTSATP--------SASDNSADVKALEAE 923
LLS S Q A A TP A+ +S +
Sbjct: 230 YLLS------IPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGL------ 277
Query: 924 IEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTGT--TGTTNNTKCNNS-SKN 980
V A +S F + K + + G NT S ++
Sbjct: 278 ------VTAVAIAETDSWES-FFVSVRKAI----TVLFFIGVRCYEAYPNTSLPPSILED 326
Query: 981 SSSHKIGTPAPLF--RKIEQAQVDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEA 1038
S + G P+P+ + Q QV Y + N KQ EI +
Sbjct: 327 SLENNEGVPSPMLSISNLTQEQVQ----DYVNKTNSHLPAG----KQVEI---------S 369
Query: 1039 AVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQT-------- 1090
V NLV V SG +S L L L K A + +Q+
Sbjct: 370 LVNGAKNLV--V--SGPPQS--------LYGLNLTLRKAK----APSGLDQSRIPFSERK 413
Query: 1091 ----------SA-------TPSASDNSADVKALEAEIEKQA---EVVRTLKASAGGDKSI 1130
++ P++ + D+ + V T G D +
Sbjct: 414 LKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFD---GSDLRV 470
Query: 1131 FAADLAKLLSLKQQLSALTGDTGTTNNTKPNH 1162
+ +++ + + L TT K H
Sbjct: 471 LSGSISE--RIVDCIIRLPVKWETTTQFKATH 500
Score = 43.5 bits (102), Expect = 5e-04
Identities = 47/274 (17%), Positives = 85/274 (31%), Gaps = 84/274 (30%)
Query: 659 NRALSFIEKNYGSTIPEI---SPIHEDFLLLALINRELSAYYSVLDKAKLRDGIRYILNI 715
NRA + + YG +I +I +P++ + + YS + + DG I
Sbjct: 1647 NRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKI 1706
Query: 716 SRYCNQ----YM---------QTQ--QPWVLFKGSPEQKSRASTVLGILCQVSY-LLSLL 759
+ N+ Y TQ QP A T+ + L
Sbjct: 1707 FKEINEHSTSYTFRSEKGLLSATQFTQP-------------ALTL------MEKAAFEDL 1747
Query: 760 LSPYMPSTASTIA--SQLG--------ASHLKYSLSSSPSLVQFLPTGHKIGTPAPLFRK 809
S + +T A S LG A + S+ S +V G
Sbjct: 1748 KSKGLIPADATFAGHS-LGEYAALASLADVM--SIESLVEVV------FYRG------MT 1792
Query: 810 IEQA-QVDEW-KLKYG------GQQNKESSNNKKEKKQAEITFSSVEELEAA---VATQG 858
++ A DE + YG G+ S + + + +E V Q
Sbjct: 1793 MQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQ- 1851
Query: 859 NLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMK 892
Q ++G ++ +D + ++ ++ K
Sbjct: 1852 ----QYVAAGDLRA-----LDTVTNVLNFIKLQK 1876
Score = 30.4 bits (68), Expect = 4.9
Identities = 26/141 (18%), Positives = 39/141 (27%), Gaps = 56/141 (39%)
Query: 4 LSN--RNNV-----QTLKLLITA---------------EFSTTKLDVELVDVADARLL-- 39
L N +N V Q+L L FS KL R L
Sbjct: 370 LVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKF------SNRFLPV 423
Query: 40 --------LSKTVPVLELDDGSQLFSANQSCLYLSKFDTKNES-----------AINQWL 80
L ++ D S N + + +DT + S I +
Sbjct: 424 ASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCI 483
Query: 81 -----EWESVELFPS--VLSF 94
+WE+ F + +L F
Sbjct: 484 IRLPVKWETTTQFKATHILDF 504
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH,
mosquito, detoxification, xenobiotics; HET: GTS; 2.50A
{Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Length = 218
Score = 63.0 bits (154), Expect = 4e-11
Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 39/186 (20%)
Query: 14 KLLITAEFSTTKLDVELVDV--------ADARLLLS--KTVPVLELDDGSQLFSANQSCL 63
+L+ A+ ++++L + + L+ +P ++ D G L+ +
Sbjct: 16 SVLLLAKM--IGVELDLKVLNIMEGEQLKPDFVELNPQHCIPTMD-DHGLVLWESRVILS 72
Query: 64 YL-SKF---------DTKNESAINQWLEWESVELFPSVLSFF--------DNPKVLPDNL 105
YL S + D ++ + ++Q L ++ L+ V+ ++ + L
Sbjct: 73 YLVSAYGKDENLYPKDFRSRAIVDQRLHFDLGTLYQRVVDYYFPTIHLGAHLDQTKKAKL 132
Query: 106 KTKLNVLNEAISNS-FLIENSTTVADICI--WTCVYPLLSDSKVRPLLSSYTNITPWYDR 162
L + + N T+ADI + L Y + W +
Sbjct: 133 AEALGWFEAMLKQYQWSAANHFTIADIALCVTVSQIEAFQFD-----LHPYPRVRAWLLK 187
Query: 163 ISKLPQ 168
+
Sbjct: 188 CKDELE 193
>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET:
GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*
Length = 201
Score = 62.2 bits (152), Expect = 5e-11
Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 30/153 (19%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLS-KF---------DTKNESAINQWLEWESVELFPS 90
VP LE+ G+ + Q+ Y+ + + + + L + S +L +
Sbjct: 52 VPALEVKPGTVIT---QNAAILQYIGDHSDVAAFKPAYGSIERARLQEALGFCS-DLHAA 107
Query: 91 VLSFFDNPKVLPD-------NLKTKLNVLNEAIS--NSFLIENSTTVADICIWTCVYPLL 141
F P + + N+ +L L +S N++ + + T D + +
Sbjct: 108 FSGLF-APNLSEEARAGVIANINRRLGQLEAMLSDKNAYWLGDDFTQPDAYASVIIGWGV 166
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
LS+Y +R+ P VQKA K
Sbjct: 167 GQKLD---LSAYPKALKLRERVLARPNVQKAFK 196
>3lsz_A Glutathione S-transferase; xenobiotic, biodegradative metabolism,
PSI2, NYSGXRC, structural genomics, protein structure
initiative; HET: GSH; 1.70A {Rhodobacter sphaeroides}
Length = 225
Score = 62.8 bits (153), Expect = 6e-11
Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 33/158 (20%)
Query: 43 TVPVLELDDGSQLFSANQS---CLYLSKF--------DTKNESAINQWLEWE--SVELFP 89
+P LE ++G L +S L++++ ++ + W + +VE
Sbjct: 63 QIPCLE-EEGLILT---ESLAITLHIARTQGGQLGPRSEPEDALMVSWSLFAATAVEPPA 118
Query: 90 SVLSFF---------DNPKVLP---DNLKTKLNVLNEAISNS-FLIENSTTVADICIWTC 136
+ + + + L+ L L + +L+ TVAD+ +
Sbjct: 119 LEIQLIQRSGGGTSPEGQAAIAIAAERLRRPLARLERHFAAEDYLVGGRFTVADLNLAET 178
Query: 137 VYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+ + LL + + W DR P + ++
Sbjct: 179 LRYGQA---HPALLEPFPAVAAWLDRCQSRPAFRLMME 213
>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor
complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP:
a.45.1.1 c.47.1.5
Length = 209
Score = 62.2 bits (152), Expect = 8e-11
Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 37/199 (18%)
Query: 14 KLLITAEFSTTKLDVELVDV--------ADARLLLS--KTVPVLELDDGSQLFSANQSCL 63
+ +TA +++ L L L+ +P L D+G L+ + +
Sbjct: 14 AVQMTAAA--VGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLV-DNGFALWESRAIQI 70
Query: 64 YL-SKF---------DTKNESAINQWLEWESVELFPSVLS-----FFDNPKVLP---DNL 105
YL K+ D + + +NQ L ++ L+ F P +
Sbjct: 71 YLAEKYGKDDKLYPKDPQKRAVVNQRLYFDMGTLYQRFADYHYPQIFAKQPANPENEKKM 130
Query: 106 KTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPL-LSSYTNITPWYDRI 163
K + LN + + N T+AD+ + + +V + Y N+ W+ R
Sbjct: 131 KDAVGFLNTFLEGQEYAAGNDLTIADLSLAATIATY----EVAGFDFAPYPNVAAWFARC 186
Query: 164 SKLPQVQKALKTWTEVLKG 182
+ + K
Sbjct: 187 KANAPGYALNQAGADEFKA 205
>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A
{Methylococcus capsulatus} PDB: 3uap_A*
Length = 227
Score = 62.3 bits (152), Expect = 9e-11
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 27/152 (17%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLS----------KFDTKNESAINQWLEWESVELFPS 90
VP L+LDDG L + YL+ T + +WL + S E+ +
Sbjct: 54 VPALQLDDGQVLT---EDQVILQYLADLKPESGLMPPSGTFERYRLLEWLAFISTEIHKT 110
Query: 91 VLSFF------DNPKVLPDNLKTKLNVLNEAIS--NSFLIENSTTVADICIWTCVYPLLS 142
F+ + ++ L +L+ + + + +L+ + +VAD + T +
Sbjct: 111 FGPFWNPESPEASKQIALGLLSRRLDYVEDRLEAGGPWLMGDRYSVADAYLSTVLGWC-- 168
Query: 143 DSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
++ LS + I + +R P VQ A+K
Sbjct: 169 -EYLKIDLSKWPRILAYLERNQARPAVQAAMK 199
>2hra_A Glutamyl-tRNA synthetase, cytoplasmic; GST-fold, ligase; 1.90A
{Saccharomyces cerevisiae} PDB: 2hrk_A 2hsm_A
Length = 209
Score = 61.8 bits (149), Expect = 1e-10
Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 17/180 (9%)
Query: 4 LSNRNNVQTLKLLITAEFSTTKLDVELVDVADARLLLSKTVPVLELDDGSQLFSANQSCL 63
++ + + LI A ++ + +L+ K P +LDD ++ +
Sbjct: 25 INGKAPIVAYAELIAARI----VNALAPNSIAIKLVDDKKAPAAKLDDATEDVFNKITSK 80
Query: 64 YLSKFDTKNESAINQWLEWESVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAIS-NSFLI 122
+ + FD ++ + +W+ EL +F L L L+ ++ +F++
Sbjct: 81 FAAIFDNGDKEQVAKWVNLAQKELVIK--NFAK--------LSQSLETLDSQLNLRTFIL 130
Query: 123 ENST-TVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTWTEVLK 181
+ AD+ W + + N++ WY + P +A ++ L
Sbjct: 131 GGLKYSAADVACWGALRSNGMCGSIIKN-KVDVNVSRWYTLLEMDPIFGEAHDFLSKSLL 189
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A
{Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Length = 219
Score = 60.7 bits (148), Expect = 2e-10
Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 32/167 (19%)
Query: 43 TVPVLELDDGSQLFSANQSCLYL-SKF--------------DTKNESAINQWLEWESVEL 87
+P L +DG L+ + +YL K+ D + + ++Q L ++ L
Sbjct: 51 CIPTLVDEDGFVLWESRAIQIYLVEKYGAHDADLAERLYPSDPRRRAVVHQRLFFDVAVL 110
Query: 88 FPSVLSFFD---NPKVLPDNLKTKLNVLNEAIS--NSFLIE-------NSTTVADICIWT 135
+ ++ + +P +L + +A+ N+FL + T+AD+ I
Sbjct: 111 YQRFAEYYYPQIAGQKVPVGDPGRLRSMEQALEFLNTFLEGEQYVAGGDDPTIADLSIL- 169
Query: 136 CVYPLLSDSKVRPL-LSSYTNITPWYDRISKLPQVQKALKTWTEVLK 181
++ +V L Y N+ WY+R S + +V
Sbjct: 170 ---ATIATYEVAGYDLRRYENVQRWYERTSAIVPGADKNVEGAKVFG 213
>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A
{Xylella fastidiosa}
Length = 207
Score = 60.3 bits (147), Expect = 3e-10
Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 35/159 (22%)
Query: 44 VPVLELDDGSQLFSANQS---CLYL-SKFDTKN----------ESAINQWLEWESVELFP 89
VP L++ D L Q+ Y+ + + IN+W+ + + ++ P
Sbjct: 51 VPALQVGDWV-LT---QNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHP 106
Query: 90 SV------LSFFDNPKVLPD-------NLKTKLNVLNEAISNS-FLIENSTTVADICIWT 135
++ +P+++ L+ + + + +L + AD ++
Sbjct: 107 MYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYV 166
Query: 136 CVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+ KV LSS ++ +++R+ P VQ AL+
Sbjct: 167 TLRWA---KKVGVDLSSLDALSAFFERMEADPGVQAALQ 202
>1fyj_A Multifunctional aminoacyl-tRNA synthetase; helix-turn-helix,
ligase; NMR {Homo sapiens} SCOP: a.16.1.3
Length = 57
Score = 53.8 bits (129), Expect = 2e-09
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 847 VEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQ 895
L VA QG++VR++K+ K + V +LLSLK + + Q+
Sbjct: 2 SLVLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEKTGQE 50
Score = 53.8 bits (129), Expect = 2e-09
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 1033 VEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQ 1081
L VA QG++VR++K+ K + V +LLSLK + + Q+
Sbjct: 2 SLVLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEKTGQE 50
Score = 48.4 bits (115), Expect = 2e-07
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 916 DVKALEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTG 964
D L + Q +VVR LKA K A + +LLSLK + TG
Sbjct: 1 DSLVLYNRVAVQGDVVRELKAK-KAPKEDVDAAVKQLLSLKAEYKEKTG 48
Score = 48.0 bits (114), Expect = 2e-07
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 1102 DVKALEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSALTG 1150
D L + Q +VVR LKA K A + +LLSLK + TG
Sbjct: 1 DSLVLYNRVAVQGDVVRELKAK-KAPKEDVDAAVKQLLSLKAEYKEKTG 48
>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification;
HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A
Length = 230
Score = 57.7 bits (140), Expect = 3e-09
Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 31/154 (20%)
Query: 43 TVPVLELDDGSQLFSANQS---CLYLS-KF------DTKNESAINQWLEWESVELFPSVL 92
+P E LF +S ++++ D + W+ + PS+L
Sbjct: 72 QIPSYE-QGDLILF---ESGAIVMHIAQHHSGLLPEDQLRRARTVAWMFAALNTIEPSIL 127
Query: 93 SFFDNPKVLPD-------------NLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYP 139
+F + L +L+ L+ + + +E S + ADI + +
Sbjct: 128 NFTTVWLFERNEPWHEARLARTKEQLLKRLDELSAWLGDREWLEGSFSAADILMICVLRR 187
Query: 140 LLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
L S +L Y N+ + +R P ++A
Sbjct: 188 LES----SGILKDYGNLLAYVERGKARPAFKRAF 217
>2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier,
S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo
sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A*
14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A*
3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A*
17gs_A* 3gus_A* 10gs_A* 1aqv_A* ...
Length = 210
Score = 56.6 bits (137), Expect = 6e-09
Identities = 23/147 (15%), Positives = 55/147 (37%), Gaps = 18/147 (12%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF-----DTKNESAINQWLEWESVELFPSVLSFFDNP 98
+P + D L+ +N +L + + E+A+ + +L +S
Sbjct: 53 LPKFQ-DGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTN 111
Query: 99 ---------KVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRP 148
K LP LK +L++ F++ + + AD + + +
Sbjct: 112 YEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAP--G 169
Query: 149 LLSSYTNITPWYDRISKLPQVQKALKT 175
L ++ ++ + R+S P+++ L +
Sbjct: 170 CLDAFPLLSAYVGRLSARPKLKAFLAS 196
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for
structural genomics of infectious diseases, csgid,
oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica
subsp} PDB: 1g7o_A
Length = 218
Score = 56.5 bits (136), Expect = 7e-09
Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 25 KLDVELVDVA----DARLLLS--KTVPVLELDDGSQLFSANQSCLYLSKFDTK------N 72
+ VEL + + K VP+L+ DD L + Y+ D K
Sbjct: 26 NIPVELNVLQNDDEATPTRMIGQKMVPILQKDDSRYLPESMDIVHYVDNLDGKPLLTGKR 85
Query: 73 ESAINQWLEW------------------------ESVELF--------PSVLSFFDNPKV 100
AI +WL + + F S + +
Sbjct: 86 NPAIEEWLRKVNGYVNQLLLPRFAKSAFDEFSTPAARQYFIRKKEASSGSFDNHLAHSAG 145
Query: 101 LPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWY 160
L + L +L++ I + + DI ++ PLL + + + T + +
Sbjct: 146 LIKKIGDDLRLLDKLIVQPNAVNGELSEDDIHLF----PLLRNLTLVAGIHWPTKVADYR 201
Query: 161 DRISKLPQV 169
D ++K Q+
Sbjct: 202 DNMAKQTQI 210
>1d2d_A TRNA synthetase, tRNA ligase; tRNA synthetase (ligase), protein
transcription; NMR {Cricetulus griseus} SCOP: a.16.1.3
PDB: 1r1b_A
Length = 59
Score = 51.5 bits (123), Expect = 1e-08
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 850 LEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 894
+ +A QG +VR++K+ K++ V+ LLSLK + + +
Sbjct: 2 VYDKIAAQGEVVRKLKAEKAPKAKVTEAVECLLSLKAEYKEKTGK 46
Score = 51.5 bits (123), Expect = 1e-08
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 1036 LEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 1080
+ +A QG +VR++K+ K++ V+ LLSLK + + +
Sbjct: 2 VYDKIAAQGEVVRKLKAEKAPKAKVTEAVECLLSLKAEYKEKTGK 46
Score = 46.1 bits (109), Expect = 1e-06
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 920 LEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTGT 965
+ +I Q EVVR LKA K+ + LLSLK + TG
Sbjct: 2 VYDKIAAQGEVVRKLKAE-KAPKAKVTEAVECLLSLKAEYKEKTGK 46
Score = 45.3 bits (107), Expect = 2e-06
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 1106 LEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSALTG 1150
+ +I Q EVVR LKA K+ + LLSLK + TG
Sbjct: 2 VYDKIAAQGEVVRKLKAE-KAPKAKVTEAVECLLSLKAEYKEKTG 45
>4exj_A Uncharacterized protein; transferase-like protein, transcription
regulation, transfer structural genomics; 1.64A
{Lodderomyces elongisporus nrrl yb-4239}
Length = 238
Score = 55.8 bits (135), Expect = 2e-08
Identities = 23/164 (14%), Positives = 50/164 (30%), Gaps = 29/164 (17%)
Query: 44 VPVLELDDGSQLF-------------SANQSCLYLSKFDTKNESAINQWLEWESVELFPS 90
VP L D G+ + Y K D K N+ L +++ +
Sbjct: 54 VPTLVDDKGTPITESNNILLYIADTYDKEHKFFYSLKQDPKLYWEQNELLFYQATQFQSQ 113
Query: 91 --VLSFFD--NPKVLP-------DNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVY 138
++ + N + + + + +S + + + T+ DI +
Sbjct: 114 TLTIANANYQNGHIDENIAQYVLSSFEKVFAFMETKLSGRDWFVGDKFTIVDIAFLVGEH 173
Query: 139 PL----LSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTWTE 178
+ L ++ N+ W+ R V++ LK
Sbjct: 174 RRRERLHNSPIWIDLKENFPNVEKWFQRAIAFENVEEILKEHAA 217
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural
genomics/proteomics initiativ structural genomics,
ligase-RNA complex; 3.21A {Pyrococcus horikoshii}
Length = 967
Score = 57.3 bits (138), Expect = 3e-08
Identities = 59/399 (14%), Positives = 128/399 (32%), Gaps = 80/399 (20%)
Query: 436 DGCGQLINAIELIQPRCKQCSQAPTVKSSTQLFLELPKIEDKLQSWVSETSDQW-SSNAR 494
G +++ + ++A Q F++ E K ++ + + R
Sbjct: 434 KGIAEIMYEFAEKNVISRFGNRAVIKIIHDQWFIDYGNPEWKEKARKALERMKILPETRR 493
Query: 495 VICKAWLKDGLKPRCITRDLKWGIPVPLPGFENKYSLSSSP------SLVQFLPTATPQS 548
+A + D L + R + G P+P SLS S ++ + + +
Sbjct: 494 AQFEAII-DWLDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLRQEG 552
Query: 549 KITLYQ---------------FMAKDNVPFHSIM---------------FPATLVAAG-D 577
K+ + + + + + +P +G D
Sbjct: 553 KLDPEKLTPEFFDYIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKD 612
Query: 578 Q------YTKVNH------------IMATEYLNYEDGKFSKSRGTGVFGNNAKDT-GLPA 618
+ NH I + E K SKS+G + +A + G A
Sbjct: 613 LIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEENG--A 670
Query: 619 DIFRFYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINRALSFIEKNYGSTIPEISP 678
D+ R Y++ + + D + +++ +L + F +S + E+
Sbjct: 671 DVVRLYIMSLAEHDSDFDWRRKEVG-----KLRKQIERFYE-LISQFAEYEVKGNVELKD 724
Query: 679 IHEDFLLLALINRELSAYYSVLDKAKLRDGIRYILN-ISRYCNQYMQTQQPWVLFKGSPE 737
I D +L +N+ + + L++ + R +++ I Y++ +
Sbjct: 725 I--DRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDLRWYLR--------RTEGR 774
Query: 738 QKSRASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLG 776
VL L V L++P+ P + +LG
Sbjct: 775 DDEAKRYVLRTLADV---WVRLMAPFTPHICEELWEKLG 810
Score = 43.8 bits (103), Expect = 4e-04
Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKA---LE 341
IT A PY++ H+G+ + DV +RF R+ N L+ G+ A
Sbjct: 38 ITVAFPYLSGHLHVGHARTYTI-PDVIARFKRMQGYNVLFPMAWHITGSPIVGIAERIKN 96
Query: 342 EGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHL 386
I + + E+ FE D + E
Sbjct: 97 RDPKTIWIYRDVYKVPEEILWTFE-DPINIVKYFMKAAKETFIRA 140
>3n5o_A Glutathione transferase; seattle structural genomics center for
infectious disease, S GST, pathogenic fungus,
coccidioidomycosis; HET: GSH; 1.85A {Coccidioides
immitis} PDB: 3lg6_A*
Length = 235
Score = 50.1 bits (120), Expect = 1e-06
Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 38/168 (22%)
Query: 41 SKTVPVLELDDGSQLFSAN-------QS---CLYL-SKF------------DTKNESAIN 77
+ TVP+L + + + S + QS YL + + +
Sbjct: 58 TNTVPLLVVSNINNTVSPSSASFSIGQSLAALEYLEEALPTNARPLLPPISNPVARAHVR 117
Query: 78 QWLEWESVELFP----SVLSFFDNPKVLP-----DNLKTKLNVLNEAISNS---FLIENS 125
+ ++ P + P D + + + S F + +
Sbjct: 118 TICNIIACDVQPVTNLKIQKKVKALDGDPTVWSRDLATQGFGAVEKLLELSAGRFCVGDE 177
Query: 126 TTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
T+AD+C+ V+ + L+ + ++ + K VQKA
Sbjct: 178 ITLADVCLVPAVW-AAERVGMD--LARFPITKRVFEEMLKEEAVQKAH 222
>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione
S-transferase; ankyrin binding, carrier crystallization,
ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1
c.47.1.5
Length = 254
Score = 50.2 bits (120), Expect = 1e-06
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSK-----FDTKNESAINQWLEWESVELFPSVLSFFDNP 98
+P D +L + Y++ E A LE +++ V +
Sbjct: 55 LPYYI-DGDVKLTQSMAIIRYIADKHNMLGGCPKERAEISMLEGAVLDIRYGVSRIAYSK 113
Query: 99 ------KVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLS 151
L L + + + + +L + T D ++ + +L L
Sbjct: 114 DFETLKVDFLSKLPEMLKMFEDRLCHKTYLNGDHVTHPDFMLYDALDVVLYMDP--MCLD 171
Query: 152 SYTNITPWYDRISKLPQVQKALKT 175
++ + + RI +PQ+ K LK+
Sbjct: 172 AFPKLVCFKKRIEAIPQIDKYLKS 195
>1x59_A Histidyl-tRNA synthetase; hisrs, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 73
Score = 45.9 bits (108), Expect = 1e-06
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 845 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQR 896
+ LE V QG VR +K + V KLL LK QL +S+Q+
Sbjct: 9 AERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQK 60
Score = 45.9 bits (108), Expect = 1e-06
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 1031 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQR 1082
+ LE V QG VR +K + V KLL LK QL +S+Q+
Sbjct: 9 AERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQK 60
Score = 43.6 bits (102), Expect = 1e-05
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1095 SASDNSADVKALEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSALTG 1150
S S A+ ALE ++ Q E VR LK + ++AKLL LK QL
Sbjct: 3 SGSSGMAERAALEELVKLQGERVRGLKQQ-KASAELIEEEVAKLLKLKAQLGPDES 57
Score = 43.6 bits (102), Expect = 1e-05
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 909 SASDNSADVKALEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTG 964
S S A+ ALE ++ Q E VR LK + ++AKLL LK QL
Sbjct: 3 SGSSGMAERAALEELVKLQGERVRGLKQQ-KASAELIEEEVAKLLKLKAQLGPDES 57
>2cvd_A Glutathione-requiring prostaglandin D synthase;
glutathione-S-transferase, isomerase; HET: GSH HQL;
1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB:
1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A*
2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*
Length = 198
Score = 48.5 bits (116), Expect = 2e-06
Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 21/148 (14%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFFDN 97
+P+LE DG L + YL+K + ++ ++ +
Sbjct: 50 IPILE-VDGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVD-TLDDFMSCFPWAEKK 107
Query: 98 P--------KVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRP 148
++L N + L+ + +LI S T AD C LL +P
Sbjct: 108 QDVKEQMFNELLTYNAPHLMQDLDTYLGGREWLIGMSVTWADFYWEICSTTLL---VFKP 164
Query: 149 -LLSSYTNITPWYDRISKLPQVQKALKT 175
LL ++ + ++ +P V +K
Sbjct: 165 DLLDNHPRLVTLRKKVQAIPAVANWIKR 192
>1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification
enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus
gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A*
Length = 219
Score = 49.0 bits (117), Expect = 2e-06
Identities = 23/171 (13%), Positives = 56/171 (32%), Gaps = 15/171 (8%)
Query: 17 ITAEFSTTKLDVELVDVADARLLLSKTVPVLELDDGSQLFSANQSCLYLSKF-----DTK 71
A + + + + L +P L D +L +N Y+++ +T+
Sbjct: 32 YKAGPAPDFDPSDWTNEKEKLGLDFPNLPYLI-DGDVKLTQSNAILRYIARKHNMCGETE 90
Query: 72 NESAINQWLEWESVELFPSVLSFFDNP------KVLPDNLKTKLNVLNEAISNS-FLIEN 124
E LE ++L + +P + L KL L+ + + + + +
Sbjct: 91 VEKQRVDVLENHLMDLRMAFARLCYSPDFEKLKPAYLEQLPGKLRQLSRFLGSRSWFVGD 150
Query: 125 STTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
T D + + N++ + R L ++ +++
Sbjct: 151 KLTFVDFLAYDVLDQQRMFVP--DCPELQGNLSQFLQRFEALEKISAYMRS 199
>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1,
NPPSFA, national project protein structural and
functional analyses; HET: GSH; 1.40A {Mus musculus} PDB:
2cz3_A 1fw1_A*
Length = 223
Score = 48.4 bits (116), Expect = 4e-06
Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 35/157 (22%)
Query: 42 KTVPVLELDDGSQLFSANQS---CLYL-SKF--------DTKNESAINQWLEWESVELFP 89
K VP L+ DG + QS YL D + + + + + + P
Sbjct: 64 KQVPALK-IDGITIV---QSLAIMEYLEETRPIPRLLPQDPQKRAIVRMISDLIASGIQP 119
Query: 90 ----SVLSFFDNPKVLPDNLK------TKLNVLNEAISNSFLIENSTTVADICIWTCVYP 139
SVL + K L + ++ + + + + ++AD+C+ V
Sbjct: 120 LQNLSVLKQVGQENQMQWAQKVITSGFNALEKILQSTAGKYCVGDEVSMADVCLVPQVAN 179
Query: 140 LLS---DSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
D LS Y I+ + L Q +
Sbjct: 180 AERFKVD------LSPYPTISHINKELLALEVFQVSH 210
>1dug_A Chimera of glutathione S-transferase-synthetic linker-C-terminal
fibrinogen gamma...; gamma chain integrin fragment; HET:
GSH; 1.80A {Schistosoma japonicum} SCOP: a.45.1.1
c.47.1.5 PDB: 1gne_A* 3qmz_T 1y6e_A 1m9a_A* 1gtb_A*
1gta_A* 1m99_A* 1m9b_A* 1ua5_A* 1u87_A* 1u88_A* 3crt_A*
3cru_A* 3d0z_A*
Length = 234
Score = 48.3 bits (115), Expect = 4e-06
Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 23/148 (15%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSK-----FDTKNESAINQWLEWESVELFPSVLSFF 95
+P D +L QS Y++ E A LE +++ V
Sbjct: 54 LPYYI-DGDVKLT---QSMAIIRYIADKHNMLGGCPKERAEISMLEGAVLDIRYGVSRIA 109
Query: 96 DNP------KVLPDNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRP 148
+ L L + + + ++L + T D ++ + +L + P
Sbjct: 110 YSKDFETLKVDFLSKLPEMLKMFEDRLCHKTYLNGDHVTHPDFMLYDALDVVL---YMDP 166
Query: 149 -LLSSYTNITPWYDRISKLPQVQKALKT 175
L ++ + + RI +PQ+ K LK+
Sbjct: 167 MCLDAFPKLVCFKKRIEAIPQIDKYLKS 194
>3c8e_A YGHU, glutathione S-transferase homologue; glutathione transferase
homologue, E. coli; HET: GSH; 1.50A {Escherichia coli}
Length = 288
Score = 48.9 bits (117), Expect = 4e-06
Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 26/142 (18%)
Query: 63 LYLS----KF---DTKNESAINQWLEWESVELFPSV--LSFFD--NPKVLP-------DN 104
LYL+ F D + WL W F P +
Sbjct: 123 LYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTME 182
Query: 105 LKTKLNVLNEAISNS-FLIENSTTVADICIW----TCVYPLLSDSKVRPLLSSYTNITPW 159
K L+VL++ ++ F+ + T+AD+ IW V + D+ SY ++ W
Sbjct: 183 AKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQRW 242
Query: 160 YDRISKLPQVQKAL---KTWTE 178
+ + P V++ +T
Sbjct: 243 AKEVGERPAVKRGRIVNRTNGP 264
>1b8x_A Protein (AML-1B); nuclear matrix targeting signal protein, signal
protein; 2.70A {Escherichia coli} SCOP: a.45.1.1
c.47.1.5
Length = 280
Score = 48.4 bits (115), Expect = 7e-06
Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 25/149 (16%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSK------FDTKNESAINQWLEWESVELFPSVLSF 94
+P D +L QS Y++ K + I+ +++ V
Sbjct: 54 LPYYI-DGDVKLT---QSMAIIRYIADKHNMLGGCPKERAEISMLEG-AVLDIRYGVSRI 108
Query: 95 FDNP------KVLPDNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVR 147
+ L L + + + ++L + T D ++ + +L +
Sbjct: 109 AYSKDFETLKVDFLSKLPEMLKMFEDRLCHKTYLNGDHVTHPDFMLYDALDVVL---YMD 165
Query: 148 P-LLSSYTNITPWYDRISKLPQVQKALKT 175
P L ++ + + RI +PQ+ K LK+
Sbjct: 166 PMCLDAFPKLVCFKKRIEAIPQIDKYLKS 194
>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI
onchocerca volvulus, immune modulation; HET: GSH; 2.00A
{Onchocerca volvulus}
Length = 225
Score = 47.4 bits (113), Expect = 7e-06
Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 31/154 (20%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSK------FDTKNESAINQWLEWESVELFPSVLSF 94
VP+L G+ L +S L L + E+ I + ELF ++ +
Sbjct: 75 VPMLN-VSGNVLG---ESHAIELLLGGRFGLLGTNDWEEAKIMAVVLN-IDELFQKLIPW 129
Query: 95 FDNP---------KVLPDN-LKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLL 141
+ L ++ + L + + S ++ N +VAD+ ++ + L
Sbjct: 130 THEKNTTKKAELFRNLSESDVMPFLGRYEKFLKESTTGHIVGNKVSVADLTVFNMLMTLD 189
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
+ L Y + + ++I ++P +++ +K
Sbjct: 190 DEV----KLEEYPQLASFVNKIGQMPGIKEWIKK 219
>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus}
SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*
Length = 208
Score = 46.6 bits (111), Expect = 1e-05
Identities = 18/150 (12%), Positives = 50/150 (33%), Gaps = 23/150 (15%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSK------FDTKNESAINQWLEWESVELFPSVLSFFDN 97
+P L D Q+ + +L++ + + I+ + E +L
Sbjct: 50 LPCLY-DGDQQIVQSGAILRHLARKYNLNGENEMETTYIDMFCE-GVRDLHVKYTRMIYM 107
Query: 98 P----------KVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKV 146
+LP L +L + ++ + + AD ++ + +
Sbjct: 108 AYETEKDPYIKSILPGELAKFEKLLATRGNGRNLILGDKISYADYALFEELDVHQ---IL 164
Query: 147 RP-LLSSYTNITPWYDRISKLPQVQKALKT 175
P L + + ++ R+ P++++ +
Sbjct: 165 DPHCLDKFPLLKVFHQRMKDRPKLKEYCEK 194
>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione
transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis
elegans}
Length = 207
Score = 46.6 bits (111), Expect = 1e-05
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 27/154 (17%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFFDN 97
+P LE DG +L ++ +L++ E+ +N + + + +F
Sbjct: 53 LPFLE-VDGKKLAQSHAIARFLAREFKLNGKTAWEEAQVNSLAD-QYKDYSSEARPYFYA 110
Query: 98 P-------------KVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLL 141
+ + L + S FL+ +S T D+ I L+
Sbjct: 111 VMGFGPGDVETLKKDIFLPAFEKFYGFLVNFLKASGSGFLVGDSLTWIDLAIAQHSADLI 170
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
+ S + + ++I +PQ++K ++T
Sbjct: 171 AKG---GDFSKFPELKAHAEKIQAIPQIKKWIET 201
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino
acid, aminoacylation, trnaLeu, structural genomics;
2.05A {Pyrococcus horikoshii}
Length = 810
Score = 48.4 bits (115), Expect = 1e-05
Identities = 59/400 (14%), Positives = 120/400 (30%), Gaps = 84/400 (21%)
Query: 437 GCGQLINAIELIQPRCKQCSQAPTVKSSTQLFLELPKIED-KLQSWVSETSDQWSSNARV 495
G +++ + ++A Q F++ E + E R
Sbjct: 435 GIAEIMYEFAEKNVISRFGNRAVIKIIHDQWFIDYGNPEWKEKARKALERMKILPETRRA 494
Query: 496 ICKAWLKDGLKPRCITRDLKWGIPVPLPGFENKYSLSSSP------SLVQFLPTATPQSK 549
+A + D L + R + G P+P SLS S ++ + + + K
Sbjct: 495 QFEAII-DWLDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLRQEGK 553
Query: 550 ITLYQ---------------FMAKDNVPFHSIMFPATLVAAG---------DQYT----- 580
+ + + + + + + D
Sbjct: 554 LDPEKLTPEFFDYIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDL 613
Query: 581 KVNH----------IMATEY----------LNYEDGKFSKSRGTGV-FGNNAKDTGLPAD 619
NH I E+ E K SKS+G + F + ++ G AD
Sbjct: 614 IPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEENG--AD 671
Query: 620 IFRFYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINR---ALSFIEKNYGSTIPEI 676
+ R Y++ + + D + + + L I R +S + E+
Sbjct: 672 VVRLYIMSLAEHDSDFDWRR---------KEVGKLRKQIERFYELISQFAEYEVKGNVEL 722
Query: 677 SPIHEDFLLLALINRELSAYYSVLDKAKLRDGIRYILNISRYCNQYMQTQQPWVLFKGSP 736
I D +L +N+ + + L++ + R +++ + W L +
Sbjct: 723 KDI--DRWMLHRLNKAIKETTNALEEFRTRTAVQWAFY-------SIMNDLRWYLRRTEG 773
Query: 737 EQKSRASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLG 776
VL L V L++P+ P + +LG
Sbjct: 774 RDDEAKRYVLRTLADV---WVRLMAPFTPHICEELWEKLG 810
Score = 42.6 bits (100), Expect = 7e-04
Identities = 23/109 (21%), Positives = 34/109 (31%), Gaps = 13/109 (11%)
Query: 285 ITSALPYVNNVPHLG----NIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKA- 339
IT A PY++ H+G I DV +RF R+ N L+ G+ A
Sbjct: 38 ITVAFPYLSGHLHVGHARTYTIP-----DVIARFKRMQGYNVLFPMAWHITGSPIVGIAE 92
Query: 340 --LEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHL 386
I + + E+ FE D + E
Sbjct: 93 RIKNRDPKTIWIYRDVYKVPEEILWTFE-DPINIVKYFMKAAKETFIRA 140
>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis
sinensis}
Length = 218
Score = 46.3 bits (110), Expect = 1e-05
Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 21/147 (14%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSKF-----DTKNESAINQWLEWESVELFPSVLSFF 95
+P + D L QS Y++ +T E A +E V+L V
Sbjct: 55 LPYYK-DGNFSLT---QSLAILRYIADKHNMIGNTPVERAKISMIEGGLVDLRAGVSRIA 110
Query: 96 DNP------KVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRP 148
L + L + ++ + N+ +L ++ T D + + +
Sbjct: 111 YQETFEQLKVPYLQQLPSTLRMWSQFLGNNSYLHGSTPTHLDFMFYEALDVIRYLDP--T 168
Query: 149 LLSSYTNITPWYDRISKLPQVQKALKT 175
+ ++ N+ + RI LP ++ +++
Sbjct: 169 SVEAFPNLMQFIHRIEALPNIKAFMES 195
>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A
{Necator americanus}
Length = 206
Score = 45.9 bits (109), Expect = 2e-05
Identities = 24/154 (15%), Positives = 59/154 (38%), Gaps = 26/154 (16%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFF-- 95
+PVLE +DG QL + YLS+ E+ ++ + + + + +
Sbjct: 51 IPVLE-EDGKQLAQSFAIARYLSRKFGFAGKTPFEEALVDSVAD-QYKDYINEIRPYLRV 108
Query: 96 -----------DNPKVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLL 141
++L + + + + S +L+ +S T AD+C+ +
Sbjct: 109 VAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIA 168
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
+ + + I +++ +P ++K ++T
Sbjct: 169 AKFP--SIYDGFPEIKAHAEKVRSIPALKKWIET 200
>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A
{Haemonchus contortus}
Length = 204
Score = 45.4 bits (108), Expect = 3e-05
Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 28/154 (18%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFFD- 96
+PVLE DG QL + YL++ E+ ++ + + + V +F
Sbjct: 51 LPVLE-VDGKQLPQSVAIVRYLARKFGYAGKSAWEEAVVDSIAD-QFKDFLNEVRPYFKV 108
Query: 97 ------------NPKVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLL 141
V + ++ + + + +L+ +S T AD+ + +
Sbjct: 109 LLGMDQGDLKALEKDVFEPARQKFFTIVTKILKENKTGYLVGDSLTFADLYVAEMGFTEH 168
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
L + + +++ P+++K ++T
Sbjct: 169 YPK----LYDGFPEVKAHAEKVRSNPKLKKWIET 198
>2fno_A AGR_PAT_752P; thioredoxin fold, GST C-terminal domain-like fold,
structura genomics, joint center for structural
genomics, JCSG; 2.00A {Agrobacterium tumefaciens} SCOP:
a.45.1.1 c.47.1.5
Length = 248
Score = 46.0 bits (109), Expect = 3e-05
Identities = 19/156 (12%), Positives = 40/156 (25%), Gaps = 27/156 (17%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSKF------DTKNESAINQWLEWESVELFPSVLSF 94
PVL + + S Q +YL + + + + + + L L+
Sbjct: 71 PPVLIDRERNFAIS--QMPAIAIYLGERLDILPATVEGRTLSAKIVNDANDVLDELTLNG 128
Query: 95 FDNP----------KVLPDNLK--TKLNVLNEAISNS-FLI-ENSTTVADICIWTCV-YP 139
L ++ N + S F++ VADI
Sbjct: 129 GREMWTPEKWQEFVPRLQKWIRIFADTGARNGLSAASGFMLGTEKIGVADIVTAILWTTV 188
Query: 140 LLSDSKVRP-LLSSYTNITPWYDRISKLPQVQKALK 174
++ + + I R+ +
Sbjct: 189 ADRFPAIKGIIEDTSPIIWGLSRRVVATAPLAALNS 224
>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water
structu transferase; HET: GTX; 1.30A {Homo sapiens}
SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A*
1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A*
3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A*
1xwg_A 3l0h_A* 1ags_A* ...
Length = 221
Score = 45.6 bits (108), Expect = 3e-05
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 24/151 (15%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF-----DTKNESAINQWLEWESVELFPSVLSFFDNP 98
VP++E DG +L Y++ E A+ +L +L P
Sbjct: 54 VPMVE-IDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCP 112
Query: 99 -------------KVLPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPLLSDSK 145
K+ + ++ +L+ N + ADI + +Y + +
Sbjct: 113 PEEKDAKLALIKEKIKNRYFP-AFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVE---E 168
Query: 146 VRP-LLSSYTNITPWYDRISKLPQVQKALKT 175
+ L+SS+ + RIS LP V+K L+
Sbjct: 169 LDSSLISSFPLLKALKTRISNLPTVKKFLQP 199
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP,
aminoacyl-tRNA synthetase, ATP-binding,
charcot-marie-tooth disease, disease mutation; HET: B4P;
2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A*
2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Length = 693
Score = 47.0 bits (111), Expect = 4e-05
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 845 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATD 900
+ L AV QG+LVR++K + + V +L + K+ LEA + + D
Sbjct: 8 EVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDD 63
Score = 47.0 bits (111), Expect = 4e-05
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 1031 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATD 1086
+ L AV QG+LVR++K + + V +L + K+ LEA + + D
Sbjct: 8 EVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDD 63
Score = 36.6 bits (84), Expect = 0.057
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 909 SASDNSADVKALEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSA 961
+ + L + +Q ++VR LK + +A+L + K+ L A
Sbjct: 2 DGAGAEEVLAPLRLAVRQQGDLVRKLKED-KAPQVDVDKAVAELKARKRVLEA 53
Score = 36.6 bits (84), Expect = 0.059
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 1095 SASDNSADVKALEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSA 1147
+ + L + +Q ++VR LK + +A+L + K+ L A
Sbjct: 2 DGAGAEEVLAPLRLAVRQQGDLVRKLKED-KAPQVDVDKAVAELKARKRVLEA 53
>3lxz_A Glutathione S-transferase family protein; structural genomics,
PP0183, PSI-2, protein structure initiative; 1.76A
{Pseudomonas putida} PDB: 3pr8_A*
Length = 229
Score = 45.0 bits (107), Expect = 4e-05
Identities = 25/182 (13%), Positives = 53/182 (29%), Gaps = 37/182 (20%)
Query: 25 KLDVELVDVADAR--LLLS----KTVPVLELDDGSQLFSANQS---CLYL-SKF------ 68
L E V + L VPVLE + G L ++ Y+
Sbjct: 25 GLTFEEVTFYGGQAPQALEVSPRGKVPVLETEHGF-LS---ETSVILDYIEQTQGGKALL 80
Query: 69 --DTKNESAINQWLEWESVELFPSVLSFF--------DNPKVL---PDNLKTKLNVLNEA 115
D ++ + + L+ + + + + P + +L L
Sbjct: 81 PADPFGQAKVRELLKEIELYIELPARTCYAESFFGMSVEPLIKEKARADLLAGFATLKRN 140
Query: 116 ISNS-FLIENSTTVADICIWTCVYPLLSDSKVRP---LLSSYTNITPWYDRISKLPQVQK 171
+ ++ T+AD+ V + K L+ + + + P + +
Sbjct: 141 GRFAPYVAGEQLTLADLMFCFSVDLANAVGKKVLNIDFLADFPQAKALLQLMGENPHMPR 200
Query: 172 AL 173
L
Sbjct: 201 IL 202
>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma
class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP:
a.45.1.1 c.47.1.5 PDB: 1gsq_A*
Length = 202
Score = 44.6 bits (106), Expect = 5e-05
Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF-----DTKNESAINQWLEWESVELFPSVLSFFDNP 98
+PVL+ DG+++ + +L++ T E + ++F V+ P
Sbjct: 50 MPVLD-IDGTKMSQSMCIARHLAREFGLDGKTSLEKYRVDEITETLQDIFNDVVKIKFAP 108
Query: 99 --------KVLPDNLKTKLNVLNEAIS-----NSFLIENSTTVADICIWTCVYPLLSDSK 145
+ + K L + + F + NS T+AD+ + + L +
Sbjct: 109 EAAKEAVQQNYEKSCKRLAPFLEGLLVSNGGGDGFFVGNSMTLADLHCYVALEVPLKHTP 168
Query: 146 VRPLLSSYTNITPWYDRISKLPQVQKALKT 175
LL I R+++ P++ LK
Sbjct: 169 --ELLKDCPKIVALRKRVAECPKIAAYLKK 196
>2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET:
GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5
PDB: 2wrt_A 1fhe_A*
Length = 216
Score = 44.4 bits (105), Expect = 6e-05
Identities = 21/145 (14%), Positives = 54/145 (37%), Gaps = 17/145 (11%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFFDN 97
+P DD +L + Y++ ++ + ++ +V+L +
Sbjct: 54 LPYYI-DDKCKLTQSLAILRYIADKHGMIGTTSEERARVSMIEGA-AVDLRQGISRISYQ 111
Query: 98 PK------VLPDNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRPLL 150
PK +L T + + ++ + N +L S + D ++ + + L
Sbjct: 112 PKFEQLKEGYLKDLPTTMKMWSDFLGKNPYLRGTSVSHVDFMVYEALDAIRYLEP--HCL 169
Query: 151 SSYTNITPWYDRISKLPQVQKALKT 175
+ N+ + RI LP ++ +++
Sbjct: 170 DHFPNLQQFMSRIEALPSIKAYMES 194
>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm,
polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A
1gul_A*
Length = 222
Score = 44.0 bits (104), Expect = 9e-05
Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFFDN 97
VP++E DG +L Y++ + K + I+ ++E L ++ F
Sbjct: 55 VPMVE-IDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLK 113
Query: 98 P------------KVLPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPLLSDSK 145
P K + + SFL+ N ++AD+ + + L
Sbjct: 114 PDDQQKEVVNMAQKAIIRYFP-VFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIP 172
Query: 146 VRPLLSSYTNITPWYDRISKLPQVQKALKT 175
+LS++ + + ++S +P +++ L+
Sbjct: 173 --NILSAFPFLQEYTVKLSNIPTIKRFLEP 200
>3h1n_A Probable glutathione S-transferase; APC84167, bordetella
bronchisepti structural genomics, PSI-2, protein
structure initiative; 1.83A {Bordetella bronchiseptica
RB50}
Length = 252
Score = 43.3 bits (102), Expect = 2e-04
Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 29/160 (18%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLE------WESVELFPSV 91
P L DG + L+L D +NQ E+ ++ V
Sbjct: 74 PPYLV-ADGMTIAQTANILLFLGVEHGLAPPDRAGRLWVNQLQLTIADLTAEAHDVHHPV 132
Query: 92 LSFFDNPK-----------VLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCV 137
+ + + +A+ + AD+ ++ V
Sbjct: 133 AAGLYYEDQQDVALRRAADFRETRMPKFMQYFEQALDRPGGWLTDMGRWSYADLSLYHVV 192
Query: 138 YPLLS--DSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
LL ++R L+ Y + + R+++LP+++ L +
Sbjct: 193 EGLLHAFPRRMRTLVHRYPRLMALHARVAELPELRGYLAS 232
>1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit
cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP:
a.45.1.1 c.47.1.5 PDB: 1guk_A
Length = 221
Score = 42.8 bits (101), Expect = 2e-04
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 28/153 (18%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSKF-----DTKNESAINQWLEWESVELFPSVLSFF 95
VP++E DG L Q+ YL+ E + +L +
Sbjct: 54 VPLVE-IDGMMLT---QTRAILSYLAAKYNLYGKDLKERVRIDMYADGTQDLMMMIAVAP 109
Query: 96 DNP---------KVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLLSD 143
+L V + + + FL+ N + ADI + + +
Sbjct: 110 FKTPKEKEESYDLILSRAKTRYFPVFEKILKDHGEAFLVGNQLSWADIQLLEAILMVE-- 167
Query: 144 SKVRP-LLSSYTNITPWYDRISKLPQVQKALKT 175
++ +LS + + + RIS +P ++K L+
Sbjct: 168 -ELSAPVLSDFPLLQAFKTRISNIPTIKKFLQP 199
>2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene
family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A
3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A*
2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A*
2gst_A* ...
Length = 218
Score = 42.9 bits (101), Expect = 3e-04
Identities = 19/146 (13%), Positives = 52/146 (35%), Gaps = 19/146 (13%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFF-- 95
+P L D ++ +N Y+++ K + + + ++ +
Sbjct: 60 LPYLI-DGTHKITQSNAILRYIARKHNLCGESEKEQIREDILEN-QFMDSRMQLAKLCYD 117
Query: 96 -DNPKVLPDNLKT---KLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRP-L 149
D K+ P+ L+ L + ++ + + + + T D + + P
Sbjct: 118 PDFEKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQ---VFEPSC 174
Query: 150 LSSYTNITPWYDRISKLPQVQKALKT 175
L ++ N+ + R L ++ +K+
Sbjct: 175 LDAFPNLKDFISRFEGLEKISAYMKS 200
>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A
{Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A
Length = 229
Score = 42.9 bits (101), Expect = 3e-04
Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 30/154 (19%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSK------FDTKNESAINQWLEWESVELFPSVLSF 94
VP++E DG +L Q+ Y++ D K + I+ ++ + +L +LSF
Sbjct: 55 VPMVE-IDGMKLV---QTRAILNYIAGKYNLYGKDLKERALIDMYVG-GTDDLMGFLLSF 109
Query: 95 FDNP-------------KVLPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPLL 141
K + + FL+ N + ADI + + +
Sbjct: 110 PFLSAEDKVKQCAFVVEKATSRYFP-AYEKVLKDHGQDFLVGNRLSWADIHLLEAILMVE 168
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
LS + + + RIS +P ++K L
Sbjct: 169 EKKS--DALSGFPLLQAFKKRISSIPTIKKFLAP 200
>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic,
heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5
Length = 224
Score = 42.9 bits (101), Expect = 3e-04
Identities = 18/145 (12%), Positives = 49/145 (33%), Gaps = 17/145 (11%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF-----DTKNESAINQWLEWESVELFPSVLSFFDNP 98
+P L D +++ +N Y+++ +T+ E +E + ++ ++ +
Sbjct: 63 LPYLL-DGKNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQLIRLCYSS 121
Query: 99 ------KVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRP-LL 150
+ L +L + + + T D + + P L
Sbjct: 122 DHEKLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNR---IFDPKCL 178
Query: 151 SSYTNITPWYDRISKLPQVQKALKT 175
+ N+ + R L ++ L++
Sbjct: 179 DEFPNLKAFMCRFEALEKIAAYLQS 203
>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI,
protein structure initiative; 3.00A {Caenorhabditis
elegans}
Length = 208
Score = 42.3 bits (100), Expect = 3e-04
Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 33/159 (20%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSK------FDTKNESAINQWLEWESVELFPSVLSF 94
+PVL DG +L QS YL++ + E+ ++ + + F
Sbjct: 52 LPVLN-IDGFELP---QSGAILRYLARKFGFAGKTPEEEAWVDAVHD-LFKDFLAEFKKF 106
Query: 95 FDNP--------------KVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCV 137
+ T N+LN + S FLI + T AD+ + +
Sbjct: 107 AAERRSGKSAEEVEKFRSEFFLPARNTYFNILNGLLEKSNSGFLIGSDITFADLVVVDNL 166
Query: 138 YPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTW 176
L + S +T + ++++ P +++ +
Sbjct: 167 LTLKNYGLF--DESEFTKLAALREKVNSYPGIKEYIAKR 203
>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid,
bacterial, biodegradation, fumaryl pyruvate; HET: TGG;
1.3A {Ralstonia SP} PDB: 2jl4_A*
Length = 214
Score = 42.7 bits (101), Expect = 3e-04
Identities = 22/163 (13%), Positives = 47/163 (28%), Gaps = 39/163 (23%)
Query: 42 KTVPVLELDDGSQLFSANQS---CLYL-SKF--------DTKNESAINQWLEWESVELFP 89
+ VP L+ L QS +L ++ D + ++ P
Sbjct: 52 QLVPALD-TGAQVLI---QSPAIIEWLEEQYPTPALLPADADGRQRVRALAAIVGCDIHP 107
Query: 90 ----SVLSFF------DNPKVLPDNLKTKLNVLN--EAISNSFLIE------NSTTVADI 131
+L + D + + EA+ ++ T+AD
Sbjct: 108 INNRRILEYLRKTFGADEAAINAWCGTWISAGFDAYEALLAVDPKRGRYSFGDTPTLADC 167
Query: 132 CIWTCVYPLLSDSKVRPL-LSSYTNITPWYDRISKLPQVQKAL 173
+ P + ++ + L+ Y I +L ++A
Sbjct: 168 YL----VPQVESARRFQVDLTPYPLIRAVDAACGELDAFRRAA 206
>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione;
HET: GSH; 1.05A {Escherichia coli}
Length = 202
Score = 42.3 bits (100), Expect = 3e-04
Identities = 27/200 (13%), Positives = 52/200 (26%), Gaps = 73/200 (36%)
Query: 24 TKLDVELVDV----ADARLL----LSKTVPVLELDDGSQLFSANQSCLYLSKFDTKNES- 74
+ E ++ AD + L K VPVL ++G F +S
Sbjct: 22 KGITFEFINELPYNADNGVAQFNPLGK-VPVLVTEEGECWF----------------DSP 64
Query: 75 AINQWLE--WESVELFPS----------VLSFFDN--------------PKVLPD----- 103
I +++E + + P + + D P
Sbjct: 65 IIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELL 124
Query: 104 ----NLKTKLNVLNEAISNSFLIENSTTVADI---CIWTCV---YPLLSDSKVRPLLSSY 153
+ L+VL + + L ++ +A I C + RP L
Sbjct: 125 RQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVK- 183
Query: 154 TNITPWYDRISKLPQVQKAL 173
+ + +
Sbjct: 184 -----LVENLFSRESFARTE 198
>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH;
1.75A {Ralstonia solanacearum} PDB: 3tot_A*
Length = 226
Score = 42.2 bits (100), Expect = 4e-04
Identities = 32/197 (16%), Positives = 54/197 (27%), Gaps = 67/197 (34%)
Query: 25 KLDVELVDV----ADARLLL---SKTVPVLELDDGSQLFSANQSCLYLSKFDTKNES-AI 76
K+D + V AD ++ VP L +DDG LF +S I
Sbjct: 25 KIDYQFVLEDVWNADTQIHQFNPLGKVPCLVMDDGGALF----------------DSRVI 68
Query: 77 NQWLE--WESVELFPS----------VLSFFDN---------------PKVLPD------ 103
++ + L P + D
Sbjct: 69 AEYADTLSPVARLIPPSGRERVEVRCWEALADGLLDAAVALRVEQTQRTPEQRSESWITR 128
Query: 104 ---NLKTKLNVLNEAI-SNSFLIENSTTVADI---CIWTCVYPLLSDSKVRPLLSSYTNI 156
+ L ++ + ++ N T+ADI C + R + N+
Sbjct: 129 QHHKIDEALKAMSRGLADRTWCNGNHLTLADIAVGCALAYLDFRQPQVDWR---EQHANL 185
Query: 157 TPWYDRISKLPQVQKAL 173
+Y RI K P +
Sbjct: 186 AAFYTRIEKRPSFLETQ 202
>3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione
disulfide, disulfide bond oxidoreductase; HET: GDS;
2.30A {Escherichia coli}
Length = 215
Score = 42.2 bits (100), Expect = 4e-04
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 22/131 (16%)
Query: 63 LYLS----KF---DTKNESAINQWLEWESVELFPSV--LSFFD--NPKVLP-------DN 104
LYL+ F +T+ +A QWL W+ L P + F+ P+ +P
Sbjct: 77 LYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVE 136
Query: 105 LKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRI 163
+ +VLN+ + NS +L + ++ADI W V ++ R L+ Y + W++RI
Sbjct: 137 TQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAW---TRQRIDLAMYPAVKNWHERI 193
Query: 164 SKLPQVQKALK 174
P +AL
Sbjct: 194 RSRPATGQALL 204
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann
fold catalytical domain, recognition domain, bound
Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP:
a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A*
2quk_A
Length = 477
Score = 43.1 bits (101), Expect = 4e-04
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 845 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQT 904
+S+ EL ++ATQG LVR +K+ K E V L+SLK +A + A
Sbjct: 7 ASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLVSLKMSYKAAAGEDYKADCPPGN 66
Query: 905 SATPSASDNSAD 916
A S A
Sbjct: 67 PAPTSNHGPDAT 78
Score = 43.1 bits (101), Expect = 4e-04
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 1031 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQT 1090
+S+ EL ++ATQG LVR +K+ K E V L+SLK +A + A
Sbjct: 7 ASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLVSLKMSYKAAAGEDYKADCPPGN 66
Query: 1091 SATPSASDNSAD 1102
A S A
Sbjct: 67 PAPTSNHGPDAT 78
>1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP:
a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A*
2aaw_A* 3fr6_A 3fr3_A*
Length = 211
Score = 41.7 bits (98), Expect = 6e-04
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 23/151 (15%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLE--------WESVELFP 89
VP+L+ L + YLSK NE + + + LF
Sbjct: 59 VPILQ-IGDLILAQSQAIVRYLSKKYNICGESELNEFYADMIFCGVQDIHYKFNNTNLFK 117
Query: 90 SVLSFFDNPKVLPDNLKTKLNVLNEAISNS-----FLIENSTTVADICIWTCVYPLLSDS 144
+ F N + LP +L + +N+ + + N+ T AD+ ++ + +
Sbjct: 118 QNETTFLN-EDLPKWSGYFEKLLKKNHTNNNNDKYYFVGNNLTYADLAVFNLYDDIETKY 176
Query: 145 KVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
L ++ + + IS LP ++ +
Sbjct: 177 P--SSLKNFPLLKAHNEFISNLPNIKNYITN 205
>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene
regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae}
SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A*
1k0a_A* 1g6w_A 1g6y_A 1hqo_A
Length = 260
Score = 42.1 bits (99), Expect = 6e-04
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Query: 96 DNPKVLPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTN 155
T ++ +L+ + T+AD+ + D + +
Sbjct: 182 TENAAAYSAGTTPMSQSRFFDYPVWLVGDKLTIADLAFVPWNNVV--DRIGINIKIEFPE 239
Query: 156 ITPWYDRISKLPQVQKALK 174
+ W + + P V KAL+
Sbjct: 240 VYKWTKHMMRRPAVIKALR 258
>1m0u_A GST2 gene product; flight muscle protein, sigma, transferase; HET:
GSH; 1.75A {Drosophila melanogaster} SCOP: a.45.1.1
c.47.1.5
Length = 249
Score = 41.6 bits (98), Expect = 7e-04
Identities = 24/153 (15%), Positives = 53/153 (34%), Gaps = 27/153 (17%)
Query: 44 VPVLELDDGSQLFSANQS---CLYLSK------FDTKNESAINQWLEWESVELFPSVLSF 94
+PVLE DG ++ +QS +L+K + I+ ++ + +
Sbjct: 97 MPVLE-VDGKRV---HQSISMARFLAKTVGLCGATPWEDLQIDIVVDT-INDFRLKIAVV 151
Query: 95 FDNP----------KVLPDNLKTKLNVLNEAISNS--FLIENSTTVADICIWTCVYPLLS 142
P + + + L L + + ++ L T AD+ ++
Sbjct: 152 SYEPEDEIKEKKLVTLNAEVIPFYLEKLEQTVKDNDGHLALGKLTWADVYFAGITD-YMN 210
Query: 143 DSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
R LL Y + D ++ L ++ ++
Sbjct: 211 YMVKRDLLEPYPALRGVVDAVNALEPIKAWIEK 243
>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator
americanus}
Length = 206
Score = 41.2 bits (97), Expect = 8e-04
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFFDN 97
VPVLE DG QL + C YL++ T +E+ ++ + + + + SFF
Sbjct: 51 VPVLE-VDGKQLAQSLAICRYLARQFGFAGKSTFDEAVVDSLAD-QYSDYRVEIKSFFYT 108
Query: 98 P-------------KVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLL 141
+VL + + + S FL+ +S T D+ + +L
Sbjct: 109 VIGMREGDVEQLKKEVLLPARDKFFGFITKFLKKSPSGFLVGDSLTWVDLLVSEHNATML 168
Query: 142 SDSKVRP-LLSSYTNITPWYDRISKLPQVQKALKT 175
P L Y + ++I +P+++K ++T
Sbjct: 169 ---TFVPEFLEGYPEVKEHMEKIRAIPKLKKWIET 200
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 41.2 bits (96), Expect = 8e-04
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 8/31 (25%)
Query: 421 VCPKCR-------YEDARGDQ-CDGCGQLIN 443
CP+C+ + GD C CG +++
Sbjct: 23 TCPECKVYPPKIVERFSEGDVVCALCGLVLS 53
>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme,
prostaglandin D2 synthase, vaccine candidate; HET: GSH;
1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5
PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A*
2cai_A* 1u3i_A*
Length = 211
Score = 40.9 bits (96), Expect = 0.001
Identities = 21/155 (13%), Positives = 56/155 (36%), Gaps = 25/155 (16%)
Query: 44 VPVLELDD-GSQLFSANQS---CLYLSK------FDTKNESAINQWLEWESVELFPSVLS 93
+P +++ D + +S Y++K + + + + + +L
Sbjct: 53 LPAVKITDNHGHVKWMVESLAIARYMAKKHHMMGGTEEEYYNVEKLIGQ-AEDLEHEYYK 111
Query: 94 FFDNP---------KVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLL 141
P ++L + L+++ E++ S + + T+AD+ + + +
Sbjct: 112 TLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLADLVLIAVID-HV 170
Query: 142 SDSKVRPLLSSYTNITPWYDR-ISKLPQVQKALKT 175
+D L Y I + ++ P++ K L
Sbjct: 171 TDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSD 205
>4ecj_A Glutathione S-transferase; transferase-like protein, transcription
regulation; HET: GSH; 1.76A {Pseudomonas aeruginosa}
PDB: 4eci_A*
Length = 244
Score = 41.1 bits (97), Expect = 0.001
Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 25/132 (18%)
Query: 63 LYLS----KF---DTKNESAINQWLEWESVELFPSV--LSFFD--NPKVLPDNLK----- 106
+YL+ + D K S + QWL ++ + P + F P+ L +
Sbjct: 75 IYLAEKTGQLMPADVKGRSRVIQWLMFQMGGVGPMQGQANVFFRYFPEKLQGAIDRYQHE 134
Query: 107 TK--LNVLNEAISNSFLIENSTTVADICI--WTCVYPLLSDSKVRPLLSSYTNITPWYDR 162
T+ VL+ + + + ++ADI W ++ + + N+ W
Sbjct: 135 TRRLYEVLDGRLGEAEYLAGDYSIADIATYPWVRIHDWSGVA-----VDGLDNLQRWIAA 189
Query: 163 ISKLPQVQKALK 174
I P VQ+ L
Sbjct: 190 IEARPAVQRGLL 201
>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH;
1.59A {Fasciola hepatica} PDB: 2wdu_A*
Length = 211
Score = 40.0 bits (94), Expect = 0.002
Identities = 24/155 (15%), Positives = 62/155 (40%), Gaps = 25/155 (16%)
Query: 44 VPVLELDDGS-QLFSANQS---CLYLSK------FDTKNESAINQWLEWESVELFPSVLS 93
VP+L++ +L +S L++ + I + + E +L+ V +
Sbjct: 53 VPLLDVTGPDGKLRRYQESMAIARLLARQFKMMGETDEEYYLIERIIG-ECEDLYREVYT 111
Query: 94 FFDNP---------KVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLL 141
F P + +N T L +++E++ +S + N T+ D+ ++T + ++
Sbjct: 112 IFRTPQGEKEAKIKEFKENNGPTLLKLVSESLESSGGKHVAGNRITLGDLFLFTTLTHVM 171
Query: 142 SDSKVRPLLSSYTNITPWYDRI-SKLPQVQKALKT 175
L + + ++ + + ++ + LK
Sbjct: 172 ETVP-GFLEQKFPKLHEFHKSLPTSCSRLSEYLKK 205
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3;
intramolecular (fusion) protein-protein complex, protein
binding/transcription complex; NMR {Mus musculus}
Length = 182
Score = 39.1 bits (91), Expect = 0.003
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 404 LHCAQCDRFLADR-FVEGVCPKCR--YEDARGDQCDGCGQLINAIELI 448
L C+ C LA+R F G C+ + G +C C I +++
Sbjct: 88 LKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVV 135
>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus}
SCOP: a.45.1.1 c.47.1.5
Length = 206
Score = 38.9 bits (91), Expect = 0.004
Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 26/154 (16%)
Query: 44 VPVLELDDGSQLFSANQSCLYLSKF------DTKNESAINQWLEWESVELFPSVLSFFDN 97
VPVLE DG QL + C YL+K + I+ + + + +++
Sbjct: 51 VPVLE-VDGQQLAQSQAICRYLAKTFGFAGATPFESALIDSLAD-AYTDYRAEMKTYYYT 108
Query: 98 PKVLP--DNLKTKLNVLNEAI--------------SNSFLIENSTTVADICIWTCVYPLL 141
D K K +VL A S+ FL+ + + D+ + V +
Sbjct: 109 ALGFMTGDVDKPKTDVLLPARTKFLGFITKFLKKNSSGFLVGDKISWVDLLVAEHVADMT 168
Query: 142 SDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
+ + + + +RI + P+++K ++T
Sbjct: 169 NRVP--EYIEGFPEVKAHMERIQQTPRIKKWIET 200
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 37.6 bits (86), Expect = 0.007
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 6/35 (17%)
Query: 1111 EKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQL 1145
EKQA ++ L+AS K ++A D A L++K +
Sbjct: 18 EKQA--LKKLQASL---K-LYADDSAPALAIKATM 46
Score = 37.2 bits (85), Expect = 0.010
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 6/35 (17%)
Query: 925 EKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQL 959
EKQA ++ L+AS K ++A D A L++K +
Sbjct: 18 EKQA--LKKLQASL---K-LYADDSAPALAIKATM 46
Score = 34.5 bits (78), Expect = 0.072
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 26/56 (46%)
Query: 870 EKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQTSATPSASDNSADVKALEAEIE 925
EK Q +LKK L+A S A D SA A++A +E
Sbjct: 18 EK---Q-------ALKK-LQA--------------SLKLYADD-SAPALAIKATME 47
Score = 34.5 bits (78), Expect = 0.072
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 26/56 (46%)
Query: 1056 EKSEWQPHVDKLLSLKKQLEAMKSQQRAATDANQTSATPSASDNSADVKALEAEIE 1111
EK Q +LKK L+A S A D SA A++A +E
Sbjct: 18 EK---Q-------ALKK-LQA--------------SLKLYADD-SAPALAIKATME 47
Score = 29.1 bits (64), Expect = 4.6
Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Query: 774 QLGASHLK-YSLSSSPSL 790
+L AS LK Y+ S+P+L
Sbjct: 24 KLQAS-LKLYADDSAPAL 40
Score = 28.8 bits (63), Expect = 7.0
Identities = 5/19 (26%), Positives = 9/19 (47%), Gaps = 2/19 (10%)
Query: 760 LSPYMPSTASTIASQLGAS 778
L Y +A +A + A+
Sbjct: 29 LKLYADDSAPALA--IKAT 45
>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein
structure initiative, NE SGX research center for
structural genomics; 2.30A {Legionella pneumophila
subsp}
Length = 222
Score = 38.1 bits (89), Expect = 0.010
Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 35/161 (21%)
Query: 42 KTVPVLELDDGSQLFSANQSCLYLSKF---------DTKNESAINQWLEWESVELFP--- 89
+ VP L+ +G L + YL + D ++ + + ++ P
Sbjct: 54 ELVPSLD-INGQILSQSMAIIDYLEEIHPEMPLLPKDPFMKATLKSMALIVACDMHPLNN 112
Query: 90 -SVLSFFDNPKVLPD---------NLKTKLNVLNEAISNS-----FLIENSTTVADICI- 133
VL+ + LKT + E + + +AD+C+
Sbjct: 113 LRVLNRLKEQFNANEEQVLEWYHHWLKTGFDAFEEKLGALERDKPVCFGSEVGLADVCLI 172
Query: 134 -WTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
++SY I + LP A
Sbjct: 173 PQVYNAHRFHFD-----MASYPIINEINEYCLTLPAFHDAA 208
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A
{Bombyx mori}
Length = 246
Score = 38.2 bits (89), Expect = 0.011
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 8/103 (7%)
Query: 79 WLEWESVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAISNS---FLIENSTTVADICI-- 133
+E + + S+ F N + + L + + ++N + N + D +
Sbjct: 122 LIERFNELIKGSLECFDTNFAFGSEQIIQTLEIFEKELTNRGTNYFGGNRPGMLDYMVWP 181
Query: 134 ---WTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
+ ++D K S + N W D++ V+K
Sbjct: 182 WVERLYLLRCVNDRKFVEKKSLFPNFADWGDQMQLDDIVKKHA 224
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein
ISL-1; protein-protein complex, LIM domain, Zn finger,
activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Length = 169
Score = 37.1 bits (86), Expect = 0.013
Identities = 21/95 (22%), Positives = 28/95 (29%), Gaps = 24/95 (25%)
Query: 380 TEIVQHLFDRV-HKAGFTSSASVEQLHCAQCDRFLA--DRFVEG-----VCPKCRYEDAR 431
T++V+ D V H F C C R LA D F VC YE A+
Sbjct: 78 TQVVRRAQDFVYHLHCFA---------CVVCKRQLATGDEFYLMEDSRLVCKAD-YETAK 127
Query: 432 GDQCDGCGQLINAIELI------QPRCKQCSQAPT 460
G G ++ Q +
Sbjct: 128 QGGSGGSGGSGGGTPMVAASPERHDGGLQANPVEV 162
Score = 31.0 bits (70), Expect = 1.2
Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 41/100 (41%)
Query: 399 ASVEQLHCAQCDRFLADRFVEGV--------CPKCR----------------------YE 428
++ E CA CD+ + DRF+ C KC +
Sbjct: 2 STPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 61
Query: 429 DARGDQCDGCGQLINAIELIQP-----------RCKQCSQ 457
G +C C I ++++ C C +
Sbjct: 62 KRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKR 101
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold,
coiled coil, riken structural genomics/proteomics
initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus}
SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A*
1iyw_A
Length = 862
Score = 38.7 bits (91), Expect = 0.013
Identities = 47/228 (20%), Positives = 77/228 (33%), Gaps = 62/228 (27%)
Query: 553 YQFMAKDNVPFHSIMFPATLVAAGDQYTKVNHIMATEYLNYEDG-KFSKSRGTGV----- 606
Y FM PF +++ LV E G K SKS+G +
Sbjct: 504 YHFM--GERPFKTVLLHG-LVLD------------------EKGQKMSKSKGNVIDPLEM 542
Query: 607 ---FGNNAKDTGLPADIFRFYLLYVRPENQDTSFSWQDLATKNNSELLNNLGNFINR--- 660
+G AD RF L+Y+ QD L NF N+
Sbjct: 543 VERYG---------ADALRFALIYLATGGQDIRLDL---------RWLEMARNFANKLYN 584
Query: 661 ALSFIEKNYGSTIPEISPIH-EDFLLLALINRELSAYYSVLDKAKLRDGIRYILNI--SR 717
A F+ + + D + + ++R + ++ + L R + + S
Sbjct: 585 AARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSE 644
Query: 718 YCNQYMQTQQPWVLFKGSPEQKSRASTVLGILCQVSYLLSLLLSPYMP 765
+C+ Y++ +P L G+ VL +L + LL P MP
Sbjct: 645 FCDWYLEAAKP-ALKAGNAHTLRTLEEVLAVLLK-------LLHPMMP 684
Score = 38.7 bits (91), Expect = 0.014
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 29/99 (29%)
Query: 274 VLPQPNENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGT 333
+P PN +T +L H+G+ + L D R+ R+ +++ GTD G
Sbjct: 39 FMPPPN-----VTGSL-------HMGHALDNSLQ-DALIRYKRMRGFEAVWLPGTDHAGI 85
Query: 334 ATETKA----LEEGLTPRQICDKYFAIHRE-----VYEW 363
AT+ L+EG T + RE V++W
Sbjct: 86 ATQVVVERLLLKEGKTRHD-------LGREKFLERVWQW 117
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1,
LIM domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Length = 101
Score = 35.1 bits (81), Expect = 0.021
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 404 LHCAQCDRFLADR-FVEG----VCPKCRYEDARGDQCDGCGQLINAIELI 448
CA+C LA+ FV +C KC +C GC + I A +
Sbjct: 34 FRCAKCLHPLANETFVAKDNKILCNKC-TTREDSPKCKGCFKAIVAGDQN 82
>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal
domain-like fold, structura genomics, joint center for
structural genomics; 2.05A {Ralstonia eutropha}
Length = 214
Score = 36.5 bits (85), Expect = 0.024
Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 60/192 (31%)
Query: 25 KLDVELVDVADARLLL----SKTVPVLELDDGSQLFSANQSCLYLSKFDTKNES-AINQW 79
+ E V + VP + + G L ES IN++
Sbjct: 25 NVPFEEVLAWIGETDTTATPAGKVPYMITESG---------SLC--------ESEVINEY 67
Query: 80 LE--WESVELFPS----------VLSFFDN----------PKVLP-------------DN 104
LE + L P +++F + P+
Sbjct: 68 LEAAYPQTPLLPRDPMQAGKVREIVTFLELYLELTARELYPEAFFGGKVSDNVKERQLKL 127
Query: 105 LKTKLNVLNEAISNS-FLIENSTTVADICI--WTCVYPLLSDSKVRPLLSSYTNITPWYD 161
L + + S ++ ++ T+AD + + L + + +
Sbjct: 128 LSRYVPAFAKLAKFSPYVAGDTFTLADCAAAVHLPLVSSCTKIIYGKDLLADLPVKEYLK 187
Query: 162 RISKLPQVQKAL 173
+S+ P VQK
Sbjct: 188 TLSERPSVQKVN 199
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion,
acrosom; 2.62A {Homo sapiens}
Length = 126
Score = 35.5 bits (82), Expect = 0.024
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Query: 406 CAQCDRFLAD-RFVE--G--VCPKCRYEDARGDQCDGCGQLI 442
C CD LA +V VC C Y C GC I
Sbjct: 33 CFDCDSILAGEIYVMVNDKPVCKPC-YVKNHAVVCQGCHNAI 73
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 36.3 bits (83), Expect = 0.026
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 810 IEQAQ--VDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAAV 854
E+A+ ++EW + Q K NN+ K F ++ +A +
Sbjct: 113 REKAKKDLEEWNQRQSEQVEKNKINNRIADKA----F--YQQPDADI 153
Score = 36.3 bits (83), Expect = 0.026
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 996 IEQAQ--VDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAAV 1040
E+A+ ++EW + Q K NN+ K F ++ +A +
Sbjct: 113 REKAKKDLEEWNQRQSEQVEKNKINNRIADKA----F--YQQPDADI 153
Score = 34.0 bits (77), Expect = 0.18
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 23/88 (26%)
Query: 813 AQVDEWKLKYGGQQNKESSNNKK--EKKQAEITFSSVEELEAAVATQGNLVRQVKSSGVE 870
AQ D + +E + +K E+++ + +EL+AA R+ +
Sbjct: 75 AQAD--------RLTQEPESIRKWREEQRKRL-----QELDAASKVMEQEWREKAKK--D 119
Query: 871 KSEWQPHVDKLLSLKKQLEAMKSQQRAA 898
EW +Q+E K R A
Sbjct: 120 LEEWNQR------QSEQVEKNKINNRIA 141
Score = 34.0 bits (77), Expect = 0.18
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 23/88 (26%)
Query: 999 AQVDEWKLKYGGQQNKESSNNKK--EKKQAEITFSSVEELEAAVATQGNLVRQVKSSGVE 1056
AQ D + +E + +K E+++ + +EL+AA R+ +
Sbjct: 75 AQAD--------RLTQEPESIRKWREEQRKRL-----QELDAASKVMEQEWREKAKK--D 119
Query: 1057 KSEWQPHVDKLLSLKKQLEAMKSQQRAA 1084
EW +Q+E K R A
Sbjct: 120 LEEWNQR------QSEQVEKNKINNRIA 141
>2hqt_A GU4 nucleic-binding protein 1; GST-fold, biosynthetic protein, RNA
binding; 1.90A {Saccharomyces cerevisiae} SCOP: a.45.1.2
PDB: 2hrk_B 2hsm_B 2hsn_B
Length = 124
Score = 35.0 bits (80), Expect = 0.032
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 104 NLKTKLNVLNEAI-SNSFLIENST-TVADICIWTCVYPLL-----SDSKVRPLLSSYTNI 156
++ L+ LN + N+F++ T D+ ++ PL+ S V+ ++Y +I
Sbjct: 41 QIQPHLDQLNLVLRDNTFIVSTLYPTSTDVHVFEVALPLIKDLVASSKDVKSTYTTYRHI 100
Query: 157 TPWYDRISKLPQVQKALK 174
W D + L +V K
Sbjct: 101 LRWIDYMQNLLEVSSTDK 118
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding
protein 1; B-tandem zipper, protein binding; 1.30A {Mus
musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB:
2dfy_X 2xjz_I 2xjy_B
Length = 188
Score = 35.8 bits (82), Expect = 0.043
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 10/54 (18%)
Query: 404 LHCAQCDRFLADR----FVEG---VCPKCRYEDARGD--QCDGCGQLINAIELI 448
L C+ C L D + + +C Y G+ C CGQ I A EL+
Sbjct: 33 LKCSSCQAQLGDIGTSSYTKSGMILCRND-YIRLFGNSGACSACGQSIPASELV 85
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione
S-transferase, N-terminal domain, S genomics; 1.85A
{Escherichia coli}
Length = 215
Score = 35.1 bits (81), Expect = 0.091
Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 48/186 (25%)
Query: 26 LDVELVDV--------ADARLLLS--KTVPVLELDDGSQLFSANQS---CLYLS-KF--- 68
L + + + VP+L+ D +L +S YL +F
Sbjct: 32 LSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQ-IDDFELS---ESSAIAEYLEDRFAPP 87
Query: 69 --------DTKNESAINQWLEWESVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAISNSF 120
D +N + Q W +L P + + F
Sbjct: 88 TWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLF 147
Query: 121 LIENST------------TVADICIWTCVYPLLSD-SKVRPLLSSYTNITPWYDRISKLP 167
+ +AD + + L+ +V L + +
Sbjct: 148 AMAEHLLVLGQPNLFGEWCIADTDLALMINRLVLHGDEVPERLV------DYATFQWQRA 201
Query: 168 QVQKAL 173
VQ+ +
Sbjct: 202 SVQRFI 207
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene,
transcription, developmental protein; 2.40A {Homo
sapiens} PDB: 2xjz_A
Length = 131
Score = 34.0 bits (78), Expect = 0.094
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 16/70 (22%)
Query: 404 LHCAQCDRFLADR----FVEGVCPKCR--YEDARG--DQCDGCGQLINAIELIQ------ 449
L C C L + + + CR Y G C C + I A E+
Sbjct: 30 LSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAYEMTMRVKDKV 89
Query: 450 --PRCKQCSQ 457
C +C+
Sbjct: 90 YHLECFKCAA 99
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA
inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA
synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium
smegmatis}
Length = 414
Score = 35.3 bits (82), Expect = 0.13
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Query: 574 AAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIFRFYLL---YVRP 630
+ + H + T + ++ K SKSRG V + + G+ R L Y
Sbjct: 268 SVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQLRAQGVDPSAIRLGLFSGHYRED 327
Query: 631 ENQDTSFSWQDLA 643
+S + L
Sbjct: 328 RF----WSNEVLD 336
>2yt5_A Metal-response element-binding transcription factor 2;
zinc-regulated factor 1, ZIRF1, metal-response element
DNA-binding protein M96; NMR {Mus musculus}
Length = 66
Score = 31.8 bits (72), Expect = 0.14
Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 16/60 (26%)
Query: 419 EGVCPKCRYEDARGDQ----CDGCGQ------LINAIELIQP------RCKQCSQAPTVK 462
GVC C+ E + CD CGQ I+ C+QC A T K
Sbjct: 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTK 65
>1ttz_A Conserved hypothetical protein; structural genomics, unknown
function, PSI, protein structure initiative; 2.11A
{Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Length = 87
Score = 31.6 bits (72), Expect = 0.26
Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 3/33 (9%)
Query: 27 DVELVDVADARLLLSK---TVPVLELDDGSQLF 56
V + D L S VPVL G +L
Sbjct: 28 AFFSVFIDDDAALESAYGLRVPVLRDPMGRELD 60
>3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase,
PSI, MCSG, structural genomics; 2.40A {Pseudomonas
syringae PV}
Length = 310
Score = 32.9 bits (74), Expect = 0.52
Identities = 14/121 (11%), Positives = 40/121 (33%), Gaps = 1/121 (0%)
Query: 61 SCLYLSKFDTKNESAINQWLEWESVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAISNS- 119
++ K + + LF + + + T ++ L +S+
Sbjct: 112 QPESMAVRFAKVPPDAAKAFIADRSMLFNGGTASRPPVEQVKHQWPTFMSRLESQLSHGG 171
Query: 120 FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTWTEV 179
+ + ++AD + ++ L P + Y +++ W DR+ + +
Sbjct: 172 DFLFGAPSIADFSVAHTLWFLKQTPVTAPFVDDYPSVSVWLDRVLGFGHGSLSDLSSAAA 231
Query: 180 L 180
+
Sbjct: 232 I 232
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural
genomics, protein structure initiative, nysgxrc; 2.80A
{Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Length = 541
Score = 32.4 bits (74), Expect = 0.98
Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 30/99 (30%)
Query: 618 ADIFR-------------FYLLYVR--------PENQDTSFSWQDLATKNNSELLNNLGN 656
D R LL+++ E + W DL ++ E L
Sbjct: 16 CDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQ---- 71
Query: 657 FINRALSFIEKNYGSTIPEI-----SPIHEDFLLLALIN 690
F + L + ++ + + + I E + AL++
Sbjct: 72 FYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVS 110
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1
PDB: 2tma_A 2w49_A 2w4u_A
Length = 284
Score = 31.9 bits (72), Expect = 1.1
Identities = 30/242 (12%), Positives = 76/242 (31%), Gaps = 5/242 (2%)
Query: 883 SLKKQLEAMKSQQRAATDANQTSATPSASDNSADVKALEAEIEKQAEVVRTLKASAGGDK 942
++KK+++ +K + A D + K LE E+ + ++ +
Sbjct: 3 AIKKKMQMLKLDKENALDRADEAEA-DKKAAEDRSKQLEDELVSLQKKLKATEDELDKYS 61
Query: 943 SVFAADLAKLLSLKQQLSALTGTTGTTNNTKCNNSSKNSSSHKIGTPAPLFRKIEQAQVD 1002
KL +++ + + N + + + A + + D
Sbjct: 62 EALKDAQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAAD 121
Query: 1003 EWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAAVATQGNLVRQVKSSGVEKSEWQP 1062
E + +++ + +K + Q + E A + R++ + +
Sbjct: 122 ESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEE 181
Query: 1063 HVDKLLSLKKQLEAMKSQQRAATDANQTSATPSASDNSADVKALEAEIEKQAEVVRTLKA 1122
+ +LE ++ N S A S E EI+ ++ ++ +
Sbjct: 182 RAELSEGKCAELE----EEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAET 237
Query: 1123 SA 1124
A
Sbjct: 238 RA 239
>3rj1_B Mediator of RNA polymerase II transcription subun; RNA polymeras
II, POL II, head module, head, regulator, helical
bundle; 4.30A {Saccharomyces cerevisiae}
Length = 583
Score = 32.2 bits (72), Expect = 1.3
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 20/73 (27%)
Query: 755 LLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLVQFLPTG----HKIGTPAPL-FRK 809
+SLLLS ST + S SP L + + KI AP
Sbjct: 127 FVSLLLSSVKESTGMS--------------SMSPFLRKVVKPSSLNSDKIPYVAPTKKEY 172
Query: 810 IEQAQVDE-WKLK 821
IE +++ WKL+
Sbjct: 173 IELDILNKGWKLQ 185
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I
aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus
radiodurans}
Length = 851
Score = 32.1 bits (73), Expect = 1.5
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 8/42 (19%)
Query: 342 EGLTPRQICDKYFAIHREVYEWF--EIDFDYFGRTSTPQQTE 381
EG+T +C F +R +Y+W +++FD P Q E
Sbjct: 262 EGVT-HSMCSLEFVDNRAIYDWLMEKLNFDP-----RPHQYE 297
>3p5n_A RIBU, riboflavin uptake protein; transporter, alpha-helical bundle,
transport protein; HET: RBF; 3.60A {Staphylococcus
aureus}
Length = 189
Score = 30.6 bits (69), Expect = 2.0
Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 10/54 (18%)
Query: 738 QKSRASTVLGILCQVSYLLSLLLSPYMPSTASTIASQLGASHLKYSLSSSPSLV 791
Q+++ + +L ++++L+ + P +L S PSL+
Sbjct: 10 QQNKRLITISMLSAIAFVLTFIKFPIPF----------LPPYLTLDFSDVPSLL 53
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E.
coli, complex, ligase/RNA complex; HET: QSI; 2.25A
{Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P*
1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A*
1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A
Length = 553
Score = 31.4 bits (72), Expect = 2.0
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 8/42 (19%)
Query: 342 EGLTPRQICDKYFAIHREVYEWF--EIDFDYFGRTSTPQQTE 381
EG+T +C F +R +Y+W I P+Q E
Sbjct: 222 EGIT-HSLCTLEFQDNRRLYDWVLDNITIPV-----HPRQYE 257
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, LYME
disease; HET: AMP; 2.55A {Borrelia burgdorferi}
Length = 501
Score = 30.7 bits (70), Expect = 3.2
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 574 AAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIFRFYLL---YVRP 630
++ + + E+L + K SKSRG + + +D FR+ L Y
Sbjct: 278 FLNKKW--CDVFVHGEFLIMDYNKMSKSRGNFITVKDLEDQNFSPLDFRYLCLTSHYRNQ 335
Query: 631 ENQDTSFSWQDL-ATKNNSELLNNLGNFINRALSFIEKNYGSTIPEISPIHEDFLLLALI 689
FS +L A+K NL N ++ ++ +T+ + +
Sbjct: 336 LK----FSLDNLQASKIA---RENLINKLSYFYESLDPVDLNTLNKDLKNFGFSVEKEYY 388
Query: 690 NR 691
+
Sbjct: 389 DS 390
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET:
CIT; 2.02A {Yersinia pestis}
Length = 213
Score = 30.0 bits (68), Expect = 3.3
Identities = 20/170 (11%), Positives = 49/170 (28%), Gaps = 23/170 (13%)
Query: 25 KLDVELVDVADAR---LLLS----KTVPVLELDDGSQLFSANQSCLYL-SKFDTK----- 71
+ VE+ V L+ +TVP L D L+ + YL +F
Sbjct: 33 GVSVEIEQVEADNLPQDLIDLNPYRTVPTLV-DRELTLYESRIIMEYLDERFPHPPLMPV 91
Query: 72 --NESAIN-QWLEWESVELFPSVLSFF----DNPKVLPDNLKTKLNVLNEAIS-NSFLIE 123
+ + + + + + L+ +L + + F +
Sbjct: 92 YPVARGSSRLMMHRIEHDWYSLLYKIEQGNAQEAEAARKQLREELLSIAPVFNETPFFMS 151
Query: 124 NSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
++ D + + L + + + + R+ + +L
Sbjct: 152 EEFSLVDCYLA-PLLWRLPVLGIEFTGAGSKELKGYMTRVFERDAFLASL 200
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex,
transferase-growth F complex; HET: NAG FUC BMA MAN;
2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1
g.3.9.1
Length = 501
Score = 30.7 bits (68), Expect = 3.7
Identities = 12/64 (18%), Positives = 18/64 (28%), Gaps = 11/64 (17%)
Query: 405 HCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTVKSS 464
C C +F + + CP + Q D P K A VK
Sbjct: 223 DCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVN-----------PEGKYSFGATCVKKC 271
Query: 465 TQLF 468
+ +
Sbjct: 272 PRNY 275
>2bhm_A Type IV secretion system protein VIRB8; bacterial protein,
bacterial type IV secretion; 2.4A {Brucella melitensis
biovar suis} SCOP: d.17.4.26
Length = 164
Score = 29.5 bits (66), Expect = 3.8
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 16/68 (23%)
Query: 318 VNRNTLYVSGTDEYGTATETKALEEG-LTPRQICDKYFA----IHREVYEWFEI--DFDY 370
VN T G +L+E ++ + DKY+ I RE Y+W+ + D++
Sbjct: 3 VNAQT---------GAPDILTSLDEKSVSYDTVMDKYWLSQYVIARETYDWYTLQKDYET 53
Query: 371 FGRTSTPQ 378
G S+P
Sbjct: 54 VGMLSSPS 61
>3lyp_A Stringent starvation protein A; structural genomics,
GST-superfamily, SSPA, stringent starva protein A
homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB:
3mdk_A
Length = 215
Score = 30.0 bits (68), Expect = 4.1
Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 36/177 (20%)
Query: 25 KLDVELVDVADAR---LLLS----KTVPVLELDDGSQLFSANQSCLYL-SKFDTK----- 71
+ E++ V R L+ ++P L D L+ + YL ++
Sbjct: 31 GVSAEIISVEAGRQPPKLIEVNPYGSLPTLV-DRDLALWESTVVMEYLDERYPHPPLLPV 89
Query: 72 --NESAIN-QWLEWESVELFPSVLSFFDNP----------KVLPDNLKTKLNVLNEAISN 118
A + + + V D K L ++L + +
Sbjct: 90 YPVARANSRLLIHRIQRDWCGQVDLILDPRTKEAARVQARKELRESLTGVSPLFAD---K 146
Query: 119 SFLIENSTTVADICIWTCVY--PLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
F + ++ D C+ ++ P+L L + + +R Q +L
Sbjct: 147 PFFLSEEQSLVDCCLLPILWRLPVLGIE----LPRQAKPLLDYMERQFAREAFQASL 199
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A
{Methanothermobacter thermautotrophicusorganism_taxid}
Length = 553
Score = 30.3 bits (69), Expect = 4.3
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 342 EGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTE 381
G+T + K +RE E+ + + G P+
Sbjct: 285 LGVT-HVLRGKDHLANREKQEYL---YRHLG-WEPPEFIH 319
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur,
iron-sulfur cluster, pyruvate catabolism, TPP-dependent
enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP:
c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB:
1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A*
2pda_A* 2uza_A*
Length = 1231
Score = 30.2 bits (68), Expect = 5.5
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 882 LSLKKQLEAMKSQQRAATDANQTSATPSASDNSADVKALEAEIEKQAEVVRTLKASAGGD 941
+S+ + + A +++ + A + + K E LK G
Sbjct: 880 MSMFARRTHLADLAAKALESDASGDVKEALQGWLAG---KNDPIKSKEYGDKLKKLLAGQ 936
Query: 942 KSVFAADLAKLLSLKQQL 959
K L ++ ++
Sbjct: 937 KD---GLLGQIAAMSDLY 951
Score = 30.2 bits (68), Expect = 5.5
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 1068 LSLKKQLEAMKSQQRAATDANQTSATPSASDNSADVKALEAEIEKQAEVVRTLKASAGGD 1127
+S+ + + A +++ + A + + K E LK G
Sbjct: 880 MSMFARRTHLADLAAKALESDASGDVKEALQGWLAG---KNDPIKSKEYGDKLKKLLAGQ 936
Query: 1128 KSIFAADLAKLLSLKQQL 1145
K L ++ ++
Sbjct: 937 KD---GLLGQIAAMSDLY 951
>2w42_A PIWI, putative uncharacterized protein; RNAI, RISC, argonaute, PIWI
domain, protein/DNA complex; 1.90A {Archaeoglobus
fulgidus} PDB: 1ytu_A 2bgg_A 1w9h_A
Length = 427
Score = 29.7 bits (66), Expect = 6.3
Identities = 10/72 (13%), Positives = 27/72 (37%)
Query: 645 KNNSELLNNLGNFINRALSFIEKNYGSTIPEISPIHEDFLLLALINRELSAYYSVLDKAK 704
+SE L L + I + + +K+ E +H + + E +++ K
Sbjct: 217 VTSSEYLTYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKDGETKILKETVEELK 276
Query: 705 LRDGIRYILNIS 716
++ + + +
Sbjct: 277 KQEMVSRDVKYA 288
>4dej_A Glutathione S-transferase related protein; transferase-like
protein, transcription regulation; 2.90A {Idiomarina
loihiensis}
Length = 231
Score = 29.3 bits (66), Expect = 7.2
Identities = 10/97 (10%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Query: 78 QWLEWESVELFPSVLSFFDNPKVLPDNLKTKLNVLNEAISNS-FLIENSTTVADICIWTC 136
+ + + N LK + L +++ + + ++ D +
Sbjct: 104 LMMYRIERDWYSLAEKIQKNDAQARQELKEGILSLAPIFADTPYFMSEEFSLVDCYLA-P 162
Query: 137 VYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
+ L + I + R+ + Q +L
Sbjct: 163 LLWRLPAYGIDLEGQGAKEIKQYMVRLFERKTFQDSL 199
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin
domain, structural genomics, PSI, protein structure
initiative; NMR {Mycobacterium tuberculosis} SCOP:
b.118.1.1
Length = 163
Score = 28.6 bits (64), Expect = 8.9
Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 25/88 (28%)
Query: 897 AATDANQTSATPSASDNSAD-----------VKALEAEIEKQAEVVRTLKASAGGDKSVF 945
AA S + D A AL ++ Q +V TL G +VF
Sbjct: 13 AANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN---SGQYTVF 69
Query: 946 A-----------ADLAKLLSLKQQLSAL 962
A + + +L + L+++
Sbjct: 70 APTNAAFSKLPASTIDELKTNSSLLTSI 97
>2p4f_A Similar to SP|P32453 saccharomyces cerevisiae YNL ATP11; half
barrel, chaperone; HET: P6G; 1.40A {Candida glabrata cbs
138}
Length = 299
Score = 28.9 bits (64), Expect = 9.6
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 833 NKKEKKQAEITFSSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMK 892
K +K S+EEL+ +A Q + K + K + +++ L+ ++ K
Sbjct: 19 EKLLQKAKAEGVESIEELKKRLADQ----IEEKKKELNKIDPLRELEQHLNAGSRIHTNK 74
Query: 893 SQQRAATDANQTSATPSASDNSADVKAL 920
+ + + K L
Sbjct: 75 EHKTTKMSNKSNEKSGNVLPKDKPYKTL 102
Score = 28.9 bits (64), Expect = 9.6
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 1019 NKKEKKQAEITFSSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMK 1078
K +K S+EEL+ +A Q + K + K + +++ L+ ++ K
Sbjct: 19 EKLLQKAKAEGVESIEELKKRLADQ----IEEKKKELNKIDPLRELEQHLNAGSRIHTNK 74
Query: 1079 SQQRAATDANQTSATPSASDNSADVKAL 1106
+ + + K L
Sbjct: 75 EHKTTKMSNKSNEKSGNVLPKDKPYKTL 102
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.312 0.127 0.361
Gapped
Lambda K H
0.267 0.0779 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 16,268,065
Number of extensions: 937637
Number of successful extensions: 2214
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2055
Number of HSP's successfully gapped: 197
Length of query: 1175
Length of database: 6,701,793
Length adjustment: 104
Effective length of query: 1071
Effective length of database: 3,798,009
Effective search space: 4067667639
Effective search space used: 4067667639
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (27.9 bits)