RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7266
(1175 letters)
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase
(MetRS) {Escherichia coli [TaxId: 562]}
Length = 350
Score = 224 bits (570), Expect = 1e-65
Identities = 86/389 (22%), Positives = 156/389 (40%), Gaps = 60/389 (15%)
Query: 282 NILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALE 341
IL+T ALPY N HLG+++ + ADV+ R+ R+ ++ D +GT KA +
Sbjct: 3 KILVTCALPYANGSIHLGHMLEHIQ-ADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 61
Query: 342 EGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASV 401
G+TP Q+ + H+ + F I +D + T + + ++ + ++ R+ + GF + ++
Sbjct: 62 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 121
Query: 402 EQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTV 461
QL+ + FL DRFV P +
Sbjct: 122 SQLYDPEKGMFLPDRFVV-----------------------------------SGATPVM 146
Query: 462 KSSTQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGIPVP 521
+ S F +LP + LQ+W + W + GL+ I+RD +
Sbjct: 147 RDSEHFFFDLPSFSEMLQAWTRS--GALQEQVANKMQEWFESGLQQWDISRDAPY-FGFE 203
Query: 522 LPGFENKYSLSSSPSLVQFLPTATPQSK-----------------ITLYQFMAKDNVPFH 564
+P KY + + ++ + LY F+ KD V FH
Sbjct: 204 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 263
Query: 565 SIMFPATLVAAGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIFRFY 624
S+ +PA L + + +++ Y+ K SKSRGT + + + AD R+Y
Sbjct: 264 SLFWPAMLEGSNFRKP--SNLFVHGYVTVNGAKMSKSRGTFIKASTWLNH-FDADSLRYY 320
Query: 625 LL-YVRPENQDTSFSWQDLATKNNSELLN 652
+ D + +D + N++++N
Sbjct: 321 YTAKLSSRIDDIDLNLEDFVQRVNADIVN 349
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase
(MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Length = 361
Score = 215 bits (548), Expect = 1e-62
Identities = 110/396 (27%), Positives = 179/396 (45%), Gaps = 66/396 (16%)
Query: 283 ILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEE 342
++TSALPY N H G++ G L AD+F R+ RL + +++ GTDE+GT +AL+E
Sbjct: 4 YMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKE 63
Query: 343 GLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASVE 402
G +PR+I D++ + ++ +I FD+FGRT P ++ Q F + ++ G +
Sbjct: 64 GRSPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTK 123
Query: 403 QLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTVK 462
Q +C F + R C + + +
Sbjct: 124 QAYCEHDKMF-----------------------------------LPDRFAICGRPISFR 148
Query: 463 SSTQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGIPVPL 522
S ++++ ++L+ W W N + + +W+++GL+ R ITRDL WGIPVPL
Sbjct: 149 DSAHYYIKMQDFAERLKRW--IEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPL 206
Query: 523 PGFENKY------------SLSSSPSLVQFLPTAT--------PQSKITLYQFMAKDNVP 562
+ K +S + + + + + F+ KDN+P
Sbjct: 207 DEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKDNIP 266
Query: 563 FHSIMFPATLVAAGDQ--------YTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDT 614
FH+I +PA L+A G + I A EYL E KFS SR ++ + D
Sbjct: 267 FHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLDV 326
Query: 615 GLPADIFRFYLLYVRPENQDTSFSWQDLATKNNSEL 650
PAD R+YL + PE +D+ FS+ D + N EL
Sbjct: 327 -FPADYLRYYLTTIMPETRDSDFSFSDFKVRINEEL 361
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS)
{Thermus thermophilus [TaxId: 274]}
Length = 348
Score = 184 bits (468), Expect = 4e-52
Identities = 83/375 (22%), Positives = 143/375 (38%), Gaps = 33/375 (8%)
Query: 280 ENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKA 339
E +T+ + YVN PHLG+ V+ AD +R+ RL T +++GTDE+G A
Sbjct: 2 EKVFYVTTPIYYVNAEPHLGHAYTTVV-ADFLARWHRLDGYRTFFLTGTDEHGETVYRAA 60
Query: 340 LEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSA 399
G P+ D+ + ++ I +D F RT+ + ++VQ + +V++AG
Sbjct: 61 QAAGEDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYG 120
Query: 400 SVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAP 459
E L+C C+RF ++ + R + G +E +P
Sbjct: 121 EYEGLYCVSCERFYTEKE---LVEGLCPIHGRPVERRKEGNYFFRMEKYRPWL------- 170
Query: 460 TVKSSTQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGIP 519
++ +Q + N + A L + WGIP
Sbjct: 171 ---------------QEYIQENPDLIRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIP 215
Query: 520 VP-----LPGFENKYSLSSSPSLVQFLPTATPQSKITLYQFMAKDNVPFHSIMFPATLVA 574
+P + L+ +L A + + KD + H++ +P L A
Sbjct: 216 LPWDENHVTFVWFDALLNYVSALDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKA 275
Query: 575 AGDQYTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIFRFYLLYVRPENQD 634
AG + + + L + K SK+ G V + D R+YLL P QD
Sbjct: 276 AGIPMYR-HLNVGGFLLGPDGRKMSKTLGNVVDPFALLE-KYGRDALRYYLLREIPYGQD 333
Query: 635 TSFSWQDLATKNNSE 649
T S + L T+ ++
Sbjct: 334 TPVSEEALRTRYEAD 348
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS)
{Thermus thermophilus [TaxId: 274]}
Length = 425
Score = 151 bits (382), Expect = 6e-40
Identities = 65/401 (16%), Positives = 120/401 (29%), Gaps = 34/401 (8%)
Query: 276 PQPNENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTAT 335
P+ + +I P V H+G+ + L D R+ R+ +++ GTD G AT
Sbjct: 29 PKSGKPPFVIFMPPPNVTGSLHMGHALDNSL-QDALIRYKRMRGFEAVWLPGTDHAGIAT 87
Query: 336 ETKA----LEEGLTPRQICDKYFAIHREVYE--------------WFEIDFDYFGRTSTP 377
+ L+EG T + + F ++ D+ T
Sbjct: 88 QVVVERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDE 147
Query: 378 QQTEIVQHLFDRVHKAGFTSSASVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDG 437
+++ V++ F R + G A C +C+ L+D VE +
Sbjct: 148 KRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEVETCSRCGTPIEYAIFPQWW 207
Query: 438 CGQLINAIELIQPRCKQCSQAPTVKSSTQLFLELPKIEDKLQSWVSETSDQWSSNARVIC 497
A E+++ + + L ++D S Q + C
Sbjct: 208 LRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNISRQLWWGHQIPAWYCEDC 267
Query: 498 KAWLKDGLKPRCITRDLKWGIPVPLPGFENKYSLSSSPSLVQFLPTATPQSKI------- 550
+A + P + + S + L T +
Sbjct: 268 QAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALWPLSTLGWPEETEDLKAFY 327
Query: 551 -TLYQFMAKDNVPFHSIMFPATLVAAGDQ--YTKV-NHIMATEYLNYEDGKFSKSRGTGV 606
D + + + + V H + L+ + K SKS+G +
Sbjct: 328 PGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGL---VLDEKGQKMSKSKGNVI 384
Query: 607 FGNNAKDTGLPADIFRFYLLYVRPENQDTSFSWQDLATKNN 647
+ AD RF L+Y+ QD + L N
Sbjct: 385 DPLEMVER-YGADALRFALIYLATGGQDIRLDLRWLEMARN 424
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase
(IleRS) {Thermus thermophilus [TaxId: 274]}
Length = 452
Score = 126 bits (316), Expect = 4e-31
Identities = 57/410 (13%), Positives = 111/410 (27%), Gaps = 57/410 (13%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGL 344
+ P N +PH+G+ D+F R+ + +G D +G E + ++
Sbjct: 42 VYEGPPTANGLPHVGHAQARSY-KDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLG 100
Query: 345 TP-------------RQICDKYFAIHREVYEWFEI------DFDYFGRTSTPQQTEIVQH 385
Q C + + + +E F D + T P E +
Sbjct: 101 LKSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWW 160
Query: 386 LFDRVHKAGFTSSASVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAI 445
+ G +C +C L+ V P C
Sbjct: 161 SLKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYPHCWRCSTPLMYYATE-SWFIKN 219
Query: 446 ELIQPRCKQCSQAPTVKSSTQLFLELPKIEDKLQSW-VSETSDQWSSNARVICKAWLKDG 504
L + + +Q + L W +S + +C+A K+
Sbjct: 220 TLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWALSRNRYWGTPLPIWVCQACGKEE 279
Query: 505 LKPRCITRDLKWGIPVPLPGFENKYSL-------------------------SSSPSLVQ 539
+ P+P P ++ + S +
Sbjct: 280 AIGSFQELKARATKPLPEPFDPHRPYVDQVELACACGGTMRRVPYVIDVWYDSGAMPFAS 339
Query: 540 FLPTATPQSKI-------TLYQFMAKDNVPFHSIMFPATLVAAGDQYTKVNHIMATEYLN 592
+ + + + + F+S+ ++ + V I L+
Sbjct: 340 LHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGSIAFKNV--ICHGLILD 397
Query: 593 YEDGKFSKSRGTGVFGNNAKDTGLPADIFRFYLLYVRPENQDTSFSWQDL 642
+ K SKS+G V + AD R+Y+ P D F +
Sbjct: 398 EKGQKMSKSKGNVVDPWDIIRK-FGADALRWYIYVSAPPEADRRFGPNLV 446
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS)
{Thermus thermophilus [TaxId: 274]}
Length = 494
Score = 108 bits (270), Expect = 4e-25
Identities = 39/239 (16%), Positives = 81/239 (33%), Gaps = 32/239 (13%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGL 344
+ PY + H+G++ + DV +RF R+ L+ G D +G E AL+ G+
Sbjct: 37 VLVMFPYPSGDLHMGHLKNYTM-GDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGV 95
Query: 345 TPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSSASVEQL 404
P+ +E I +D+ +T E
Sbjct: 96 HPKDWTYANIRQAKESLRLMGILYDWDREVTT------------------------CEPE 131
Query: 405 HCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPTVK-S 463
+ + +G+ + + + C C ++ ++++ RC + P K
Sbjct: 132 YYRWNQWIFLKMWEKGLAYRAKGL---VNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRE 188
Query: 464 STQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGIPVPL 522
Q +L + ++ + + + L+ I+R WG P+P+
Sbjct: 189 LEQWYLRITAYAER---LLKDLEGLNWPEKVKAMQRAWIGRLRDWLISRQRYWGTPIPM 244
Score = 30.3 bits (67), Expect = 1.4
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 17/54 (31%)
Query: 597 KFSKSRGTGV--------FGNNAKDTGLPADIFRFYLLYVRPENQDTSFSWQDL 642
SKS+G GV G ADI R +L+ P + ++ + +
Sbjct: 445 VMSKSKGNGVMVGPFVKEQG---------ADIARITILFAAPPENEMVWTEEGV 489
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS)
{Pyrococcus abyssi [TaxId: 29292]}
Length = 210
Score = 101 bits (252), Expect = 9e-25
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 652 NNLGNFINRALSFIEKNYGSTIPEISPIHE-DFLLLALINRELSAYYSVLDKAKLRDGIR 710
NNLGNF++RAL+F+ + + +PE + E D L I + ++ + +D ++
Sbjct: 2 NNLGNFVHRALTFVNRYFDGVVPERGELDELDREALEEIEKAFKEVGELIMNYRFKDALK 61
Query: 711 YILNISRYCNQYMQTQQPWVLFKGSPEQKSRASTVLGILCQVSYLLSLLLSPYMPSTAST 770
+++++ + N+Y +QPW K + E K R T + I Q+ L +LL P++P +
Sbjct: 62 RVMSLASFGNRYFDHKQPW---KTAKEDKVRTGTTVNISLQIVKALGILLEPFLPDASEK 118
Query: 771 IASQLGASHLKYSLSSSPSLVQFLPTGHKIGTPAPLFRKIEQAQVDEWKLKYGGQQNKES 830
I L +K LP GHK+ P LF+K+ Q+ + L Y + N E
Sbjct: 119 IWHLLNLDEVKRWEFRE------LPAGHKVRKPEILFKKVTDDQIIYFILNYMAKGNPEG 172
Query: 831 SNNKKEKKQAEITFSSVEELE 851
+ +K V + +
Sbjct: 173 ARILLDKYYKREDVIRVAKEK 193
Score = 39.5 bits (91), Expect = 0.001
Identities = 14/68 (20%), Positives = 27/68 (39%)
Query: 970 NNTKCNNSSKNSSSHKIGTPAPLFRKIEQAQVDEWKLKYGGQQNKESSNNKKEKKQAEIT 1029
+ K + + HK+ P LF+K+ Q+ + L Y + N E + +K
Sbjct: 126 DEVKRWEFRELPAGHKVRKPEILFKKVTDDQIIYFILNYMAKGNPEGARILLDKYYKRED 185
Query: 1030 FSSVEELE 1037
V + +
Sbjct: 186 VIRVAKEK 193
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS)
{Escherichia coli [TaxId: 562]}
Length = 162
Score = 96.3 bits (239), Expect = 1e-23
Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 11/162 (6%)
Query: 656 NFINRALSFIEKNYGSTIPEISPIHEDFLLLALINRELSAYYSVLDKAKLRDGIRYILNI 715
N +R FI K + + + L + + +R I+ +
Sbjct: 3 NLASRNAGFINKRFDGVLASELADPQ---LYKTFTDAAEVIGEAWESREFGKAVREIMAL 59
Query: 716 SRYCNQYMQTQQPWVLFKGSPEQKSRASTVLGILCQVSYLLSLLLSPYMPSTASTIASQL 775
+ N+Y+ Q PWV+ K + + + + + +L L P +P + L
Sbjct: 60 ADLANRYVDEQAPWVVAK-QEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFL 118
Query: 776 GASHLKYSLSSSPSLVQFLPTGHKIGTPAPLFRKIEQAQVDE 817
+ +Q GHK+ L+ +I+ QV+
Sbjct: 119 NTEL-------TWDGIQQPLLGHKVNPFKALYNRIDMRQVEA 153
Score = 32.3 bits (73), Expect = 0.14
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 975 NNSSKNSSSHKIGTPAPLFRKIEQAQVDE 1003
+ + HK+ L+ +I+ QV+
Sbjct: 125 DGIQQPLLGHKVNPFKALYNRIDMRQVEA 153
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase
(IleRS) {Staphylococcus aureus [TaxId: 1280]}
Length = 450
Score = 98.5 bits (244), Expect = 5e-22
Identities = 58/404 (14%), Positives = 118/404 (29%), Gaps = 46/404 (11%)
Query: 285 ITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETKALEEGL 344
+ PY N H+G+ + +L D R+ + YV G D +G E ++G+
Sbjct: 52 LHDGPPYANGNLHMGHALNKIL-KDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV 110
Query: 345 TPRQICDKYFAIHREVYEWFEID--------------FDYFGRTSTPQQTEIVQHLFDRV 390
+++ F + + +I+ F+ T P+ +F +
Sbjct: 111 DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEM 170
Query: 391 HKAGFTSSASVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQP 450
G + LA+ +E + I+ +
Sbjct: 171 ADKGLIYKGKKPVYWSPSSESSLAEAEIEYPHDWRTKKPVIFRATPQWFASISKVRQDIL 230
Query: 451 RCKQCSQAPTVKSSTQLFLELPKIED----KLQSWVSETSDQWSSNARVIC--------K 498
+ + T+++ + + + + W ++ N +I
Sbjct: 231 DAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETVNHVA 290
Query: 499 AWLKDGLKPRCITRDLKWGIP--VPLPGFENK----------YSLSSSPSLVQFLPTATP 546
+ R+ K +P PG N S S L T
Sbjct: 291 DLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPE 350
Query: 547 QSKITLYQFMAKDNV-PFHSIMFPATLVAAGDQYTKVNHIMATEYLNYEDG-KFSKSRGT 604
S D + + ++ G K +++ ++ +G K SKS G
Sbjct: 351 LSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYK--FLLSHGFVMDGEGKKMSKSLGN 408
Query: 605 GVFGNNAKDTGLPADIFRFYLLYVRPENQDTSFSWQDL-ATKNN 647
+ + ADI R ++ D S + L T ++
Sbjct: 409 VIVPDQVVKQ-KGADIARLWVSSTDYL-ADVRISDEILKQTSDD 450
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 317
Score = 95.2 bits (235), Expect = 9e-22
Identities = 30/362 (8%), Positives = 80/362 (22%), Gaps = 61/362 (16%)
Query: 274 VLPQPNENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGT 333
++ + E + + + H+GN + +A + R ++ D+Y
Sbjct: 10 IIRERGEKEKYVVESGITPSGYVHVGNF-RELFTAYIVGHALRDKGYEVRHIHMWDDYDR 68
Query: 334 ATETKALEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKA 393
+ + + + +
Sbjct: 69 FRKVPRNVPQEWKDYLGMPISEVPDPWGCHESYAEHFMRK-------------------- 108
Query: 394 GFTSSASVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCK 453
+ ++ + + G+ I L +
Sbjct: 109 -----------FEEEVEKL-----------GIEVDLLYASELYKRGEYSEEIRLAFEKRD 146
Query: 454 QCSQAPTVKSSTQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRD 513
+ + + + + R + DG
Sbjct: 147 KIMEILNK--------YREIAKQPPLPENWWPAMVYCPEHRREAEIIEWDGGWKVKYKCP 198
Query: 514 LKWGIPVPLPGFENKYSLSSSPSLVQFLPTATPQSKITLYQFMAKDNVPFHSIMFPATLV 573
V + K + ++ KD++ S +
Sbjct: 199 EGHEGWVDIRSGNVKLRWRVDWPMRWSHFGVD-------FEPAGKDHLVAGSSYDTGKEI 251
Query: 574 AAGDQYTKVNHIMATEYL--NYEDGKFSKSRGTGVFGNNAKDTGLPADIFRFYLLYVRPE 631
+ + E++ + GK S S+G + ++ + L + RF RP
Sbjct: 252 IKEVYGKEAPLSLMYEFVGIKGQKGKMSGSKGNVILLSDLYE-VLEPGLVRFIYARHRPN 310
Query: 632 NQ 633
+
Sbjct: 311 KE 312
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS)
{Thermus thermophilus [TaxId: 274]}
Length = 152
Score = 89.5 bits (221), Expect = 2e-21
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 9/160 (5%)
Query: 650 LLNNLGNFINRALSFIEKNYGSTIPEISPIHEDFLLLALINRELSAYYSVLDKAKLRDGI 709
L ++LGN + R + + + IPE E L R + K +
Sbjct: 1 LADDLGNLVQRTRAMLFRFAEGRIPEPVAGEELAEGTGLAGRLRPLV----RELKFHVAL 56
Query: 710 RYILNISRYCNQYMQTQQPWVLFKGSPEQKSRASTVLGILCQVSYLLSLLLSPYMPSTAS 769
+ + N+Y+ ++PW LFK PE+ VL + + + S+LL+P MP +
Sbjct: 57 EEAMAYVKALNRYINEKKPWELFKKEPEEA---RAVLYRVVEGLRIASILLTPAMPDKMA 113
Query: 770 TIASQLGASHLKYSLSSSPSLVQFLPTGHKIGTPAPLFRK 809
+ LG + L + LF K
Sbjct: 114 ELRRALGLKE-EVRLEEAERW-GLAEPRPIPEEAPVLFPK 151
>d1rqga3 g.41.1.1 (A:139-173) Methionyl-tRNA synthetase (MetRS),
Zn-domain {Pyrococcus abyssi [TaxId: 29292]}
Length = 35
Score = 72.0 bits (177), Expect = 1e-16
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 418 VEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRC 452
V G CP C ED +GDQC+ CG+ + LI PRC
Sbjct: 1 VIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRC 35
>d1pfva3 g.41.1.1 (A:141-175) Methionyl-tRNA synthetase (MetRS),
Zn-domain {Escherichia coli [TaxId: 562]}
Length = 35
Score = 62.0 bits (151), Expect = 4e-13
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 418 VEGVCPKCRYEDARGDQCDGCGQLINAIELIQPR 451
V+G CPKC+ D GD C+ CG + ELI+P+
Sbjct: 1 VKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPK 34
>d1axda1 a.45.1.1 (A:81-210) Class phi GST {Maize (Zea mays), type I
[TaxId: 4577]}
Length = 129
Score = 62.6 bits (151), Expect = 4e-12
Identities = 18/121 (14%), Positives = 45/121 (37%), Gaps = 17/121 (14%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFFDNPKVLP---------------DNLKTKLNVLN 113
+ + + ++ W+E E+ + ++ + P + LK L V
Sbjct: 7 NLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYE 66
Query: 114 EAISNSFLIENST-TVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKA 172
++ + ++AD+ + L + +L +Y ++ W+ + + P VQK
Sbjct: 67 ARLTKCKYLAGDFLSLADLNHVSVTLCLF-ATPYASVLDAYPHVKAWWSGLMERPSVQKV 125
Query: 173 L 173
Sbjct: 126 A 126
>d1r5aa1 a.45.1.1 (A:87-215) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-5 [TaxId: 123217]}
Length = 129
Score = 60.0 bits (145), Expect = 3e-11
Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 15/125 (12%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFF--------DNPKVLPDNLKTKLNVLNEAISNS- 119
D ++ + ++Q L ++ L+ V+ ++ + L L +
Sbjct: 2 DFRSRAIVDQRLHFDLGTLYQRVVDYYFPTIHLGAHLDQTKKAKLAEALGWFEAMLKQYQ 61
Query: 120 FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQV---QKALKTW 176
+ N T+ADI + V + + L Y + W + + ++ +T
Sbjct: 62 WSAANHFTIADIALCVTVSQI---EAFQFDLHPYPRVRAWLLKCKDELEGHGYKEINETG 118
Query: 177 TEVLK 181
E L
Sbjct: 119 AETLA 123
>d1r6ta1 a.16.1.3 (A:7-60) N-terminal domain of eukaryotic
tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 54
Score = 57.0 bits (138), Expect = 4e-11
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 845 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 894
+S+ EL ++ATQG LVR +K+ K E V L+SLK +A +
Sbjct: 1 ASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLVSLKMSYKAAAGE 50
Score = 57.0 bits (138), Expect = 4e-11
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 1031 SSVEELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 1080
+S+ EL ++ATQG LVR +K+ K E V L+SLK +A +
Sbjct: 1 ASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLVSLKMSYKAAAGE 50
Score = 46.6 bits (111), Expect = 2e-07
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 915 ADVKALEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTGT 965
A + L I Q E+VR+LKA K + + L+SLK A G
Sbjct: 1 ASLLELFNSIATQGELVRSLKAG-NASKDEIDSAVKMLVSLKMSYKAAAGE 50
Score = 45.5 bits (108), Expect = 5e-07
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 1101 ADVKALEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSALTG 1150
A + L I Q E+VR+LKA K + + L+SLK A G
Sbjct: 1 ASLLELFNSIATQGELVRSLKAG-NASKDEIDSAVKMLVSLKMSYKAAAG 49
>d1v2aa1 a.45.1.1 (A:84-208) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-6 [TaxId: 123217]}
Length = 125
Score = 58.8 bits (142), Expect = 5e-11
Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 69 DTKNESAINQWLEWESVELFPSVLS----FFDNPKVLP---DNLKTKLNVLNEAISNS-F 120
D K S +NQ L ++ L+ ++ + + LK L++L + ++ +
Sbjct: 2 DPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAY 61
Query: 121 LIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRI-SKLPQVQKALKTWTEV 179
+ TVADIC+ V L + ++ L + +I W +R+ +++P ++ K +
Sbjct: 62 AAADHLTVADICLLGTVTAL---NWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADD 118
Query: 180 LK 181
Sbjct: 119 TL 120
>d1pmta1 a.45.1.1 (A:81-201) Class beta GST {Proteus mirabilis
[TaxId: 584]}
Length = 121
Score = 58.1 bits (140), Expect = 1e-10
Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFF------DNPKVLPDNLKTKLNVLNEAISNS-FL 121
+WL + + E+ F V+ + LK+K +N+ +S +
Sbjct: 7 KALERYHQIEWLNFLASEVHKGYSPLFSSDTPESYLPVVKNKLKSKFVYINDVLSKQKCV 66
Query: 122 IENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+ TVAD ++T V L+ +++ + RI++ P V AL
Sbjct: 67 CGDHFTVADAYLFTLSQ---WAPHVALDLTDLSHLQDYLARIAQRPNVHSALV 116
>d1jlwa1 a.45.1.1 (A:91-217) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-4 [TaxId: 123217]}
Length = 127
Score = 58.1 bits (140), Expect = 1e-10
Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 15/125 (12%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFF-------DNPKVLP---DNLKTKLNVLNEAISN 118
D + + ++Q L ++ L+ ++ P P +++ L LN +
Sbjct: 2 DPRRRAVVHQRLFFDVAVLYQRFAEYYYPQIFGQKVPVGDPGRLRSMEQALEFLNTFLEG 61
Query: 119 S--FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTW 176
+ T+AD+ I + L Y N+ WY+R S +
Sbjct: 62 EQYVAGGDDPTIADLSILATIATYEV---AGYDLRRYENVQRWYERTSAIVPGADKNVEG 118
Query: 177 TEVLK 181
+V
Sbjct: 119 AKVFG 123
>d1f2ea1 a.45.1.1 (A:81-201) Class beta GST {Sphingomonas
paucimobilis [TaxId: 13689]}
Length = 121
Score = 57.7 bits (139), Expect = 1e-10
Identities = 20/114 (17%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFFDNPKVLPD-------NLKTKLNVLNEAISNS-F 120
+ + + L + E + + F P + ++K L L++ ++
Sbjct: 7 GSLDRYRLLSRLSFLGSEFHKAFVPLF-APATSDEAKAAAAESVKNHLAALDKELAGRDH 65
Query: 121 LIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
N+ +VADI ++ + + V +++Y + + +I++ P V ALK
Sbjct: 66 YAGNAFSVADIYLYVMLGWP---AYVGIDMAAYPALGAYAGKIAQRPAVGAALK 116
>d1aw9a1 a.45.1.1 (A:83-217) Class phi GST {Maize (Zea mays), type
III [TaxId: 4577]}
Length = 135
Score = 57.9 bits (139), Expect = 2e-10
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 17/117 (14%)
Query: 76 INQWLEWESVELFPSVLSFFDNPKVLP---------------DNLKTKLNVLNEAISNSF 120
+ WLE ES +P+ V P + L L+V ++ +
Sbjct: 14 LEVWLEVESHHFYPNASPLVFQLLVRPLLGGAPDAAVVDKHAEQLAKVLDVYEAHLARNK 73
Query: 121 LIENST-TVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTW 176
+ T+AD + + L S + L+++ ++ W++ I P QK +
Sbjct: 74 YLAGDEFTLADANHASYLLYL-SKTPKAGLVAARPHVKAWWEAIVARPAFQKTVAAI 129
>d1gnwa1 a.45.1.1 (A:86-211) Class phi GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 126
Score = 57.0 bits (137), Expect = 3e-10
Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 20/122 (16%)
Query: 69 DTKN--ESAI-NQWLEWESVELFPSVLSFFDNPKVLP---------------DNLKTKLN 110
D+KN + AI ++ E + P L L+
Sbjct: 4 DSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLD 63
Query: 111 VLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQV 169
V + +L + T+ D+ + L + + L + + W I+K P
Sbjct: 64 VYEARLKEFKYLAGETFTLTDLHHIPAIQ-YLLGTPTKKLFTERPRVNEWVAEITKRPAS 122
Query: 170 QK 171
+K
Sbjct: 123 EK 124
>d1jlva1 a.45.1.1 (A:85-207) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 123
Score = 56.6 bits (136), Expect = 3e-10
Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 12/122 (9%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFF--------DNPKVLPDNLKTKLNVLNEAISNS- 119
D + + +NQ L ++ L+ ++ +K ++ LN +
Sbjct: 2 DPQKRAVVNQRLYFDMGTLYQRFADYYYPQIFAKQPANAENEKKMKDAVDFLNTFLDGHK 61
Query: 120 FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKTWTEV 179
++ +S T+AD+ + V L+ Y ++ WY+R K + E
Sbjct: 62 YVAGDSLTIADLTVLATVSTY---DVAGFELAKYPHVAAWYERTRKEAPGAAINEAGIEE 118
Query: 180 LK 181
+
Sbjct: 119 FR 120
>d1fyja_ a.16.1.3 (A:) Multifunctional Glu-Pro-tRNA synthase (EPRS)
second repeated element {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 53.9 bits (130), Expect = 5e-10
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 849 ELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 894
L VA QG++VR++K+ K + V +LLSLK + + Q
Sbjct: 4 VLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEKTGQ 49
Score = 53.9 bits (130), Expect = 5e-10
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 1035 ELEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 1080
L VA QG++VR++K+ K + V +LLSLK + + Q
Sbjct: 4 VLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEKTGQ 49
Score = 50.1 bits (120), Expect = 1e-08
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 916 DVKALEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTGT 965
D L + Q +VVR LKA K A + +LLSLK + TG
Sbjct: 1 DSLVLYNRVAVQGDVVRELKAK-KAPKEDVDAAVKQLLSLKAEYKEKTGQ 49
Score = 49.3 bits (118), Expect = 2e-08
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 1102 DVKALEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSALTG 1150
D L + Q +VVR LKA K A + +LLSLK + TG
Sbjct: 1 DSLVLYNRVAVQGDVVRELKAK-KAPKEDVDAAVKQLLSLKAEYKEKTG 48
>d1d2da_ a.16.1.3 (A:) Multifunctional Glu-Pro-tRNA synthase (EPRS)
second repeated element {Chinese hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 56
Score = 53.5 bits (129), Expect = 8e-10
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 850 LEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 894
+ +A QG +VR++K+ K++ V+ LLSLK + + +
Sbjct: 2 VYDKIAAQGEVVRKLKAEKAPKAKVTEAVECLLSLKAEYKEKTGK 46
Score = 53.5 bits (129), Expect = 8e-10
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 1036 LEAAVATQGNLVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQ 1080
+ +A QG +VR++K+ K++ V+ LLSLK + + +
Sbjct: 2 VYDKIAAQGEVVRKLKAEKAPKAKVTEAVECLLSLKAEYKEKTGK 46
Score = 45.5 bits (108), Expect = 5e-07
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 920 LEAEIEKQAEVVRTLKASAGGDKSVFAADLAKLLSLKQQLSALTGT 965
+ +I Q EVVR LKA K+ + LLSLK + TG
Sbjct: 2 VYDKIAAQGEVVRKLKAE-KAPKAKVTEAVECLLSLKAEYKEKTGK 46
Score = 44.3 bits (105), Expect = 1e-06
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 1106 LEAEIEKQAEVVRTLKASAGGDKSIFAADLAKLLSLKQQLSALTG 1150
+ +I Q EVVR LKA K+ + LLSLK + TG
Sbjct: 2 VYDKIAAQGEVVRKLKAE-KAPKAKVTEAVECLLSLKAEYKEKTG 45
>d1n2aa1 a.45.1.1 (A:81-201) Class beta GST {Escherichia coli
[TaxId: 562]}
Length = 121
Score = 55.4 bits (133), Expect = 8e-10
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFF------DNPKVLPDNLKTKLNVLNEAISNS-FL 121
++ + +WL + + EL F + + L+ KL +NEA+ + ++
Sbjct: 7 NSISRYKTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWI 66
Query: 122 IENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
T+AD ++T + V+ L +I + R+++ P+VQ AL
Sbjct: 67 CGQRFTIADAYLFTVLRWA---YAVKLNLEGLEHIAAFMQRMAERPEVQDALS 116
>d1nhya1 a.45.1.1 (A:76-219) GST-like domain of elongation factor
1-gamma {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 144
Score = 53.4 bits (127), Expect = 8e-09
Identities = 15/118 (12%), Positives = 41/118 (34%), Gaps = 12/118 (10%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFF--------DNPKVLP---DNLKTKLNVLNEAIS 117
D ++ I +W + +L + + N K + D + +++ +
Sbjct: 14 DLNAQAQIIRWQSLANSDLCIQIANTIVPLKGGAPYNKKSVDSAMDAVDKIVDIFENRLK 73
Query: 118 NS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
N +L + ++AD+ + + + I W++ + P ++ K
Sbjct: 74 NYTYLATENISLADLVAASIFTRYFESLFGTEWRAQHPAIVRWFNTVRASPFLKDEYK 131
>d2hrkb1 a.45.1.2 (B:4-121) GU4 nucleic-binding protein 1, Arc1p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 118
Score = 48.8 bits (116), Expect = 1e-07
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 24/132 (18%)
Query: 51 DGSQLFSANQSCLYLSKFDTKNESAINQWLEWESVELFPSVLSFFDNPKVLPDNLKTKLN 110
D F + Y F + + QW S + ++ + L+
Sbjct: 2 DLVTKFESLIISKYPVSFTKEQSAQAAQWE------------SVLKSGQI-----QPHLD 44
Query: 111 VLNEAISNS--FLIENSTTVADICIWTCVYPLLSDSKVR-----PLLSSYTNITPWYDRI 163
LN + ++ + T D+ ++ PL+ D ++Y +I W D +
Sbjct: 45 QLNLVLRDNTFIVSTLYPTSTDVHVFEVALPLIKDLVASSKDVKSTYTTYRHILRWIDYM 104
Query: 164 SKLPQVQKALKT 175
L +V K
Sbjct: 105 QNLLEVSSTDKL 116
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS)
{Escherichia coli [TaxId: 562]}
Length = 315
Score = 52.3 bits (124), Expect = 2e-07
Identities = 48/365 (13%), Positives = 89/365 (24%), Gaps = 73/365 (20%)
Query: 279 NENNILITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLVNRNTLYVSGTDEYGTATETK 338
+ + + V ++ H+G+ V + DV +R+ R + YV + +
Sbjct: 19 HAGEVGMYVCGITVYDLCHIGHGRTFV-AFDVVARYLRFLGYKLKYVRNITDIDDKIIKR 77
Query: 339 ALEEGLTPRQICDKYFAIHREVYEWFEIDFDYFGRTSTPQQTEIVQHLFDRVHKAGFTSS 398
A E G + + D+ + E + DFD + H+ + +
Sbjct: 78 ANENGESFVAMVDRM------IAEMHK-DFDALNILRPDMEPRATHHIAEIIEL------ 124
Query: 399 ASVEQLHCAQCDRFLADRFVEGVCPKCRYEDARGDQCDGCGQLINAIELIQPRCKQCSQA 458
EQL + V + G
Sbjct: 125 --TEQLIAKGHAYVADN---GDVMFDVPTDPTYGVLS----------------------- 156
Query: 459 PTVKSSTQLFLELPKIEDKLQSWVSETSDQWSSNARVICKAWLKDGLKPRCITRDLKWGI 518
L + + R L K + WG
Sbjct: 157 ----------------RQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGA 200
Query: 519 PVPLPGFENKYSLSSSPSLVQFLPTATPQSKITLYQFMAKDNVPFHSIMFPATLVAAGDQ 578
P E D + H A
Sbjct: 201 GRPGWHIECSA------------MNCKQLGNHFDIHGGGSDLMFPHHENEIAQ-STCAHD 247
Query: 579 YTKVNHIMATEYLNYEDGKFSKSRGTGVFGNNAKDTGLPADIFRFYLLYVRPENQDTSFS 638
VN+ M + + + K SKS G + A+ R++L+ ++S
Sbjct: 248 GQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLK-YYDAETVRYFLMSGHY-RSQLNYS 305
Query: 639 WQDLA 643
++L
Sbjct: 306 EENLK 310
>d1ljra1 a.45.1.1 (A:80-244) Class theta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 165
Score = 48.3 bits (114), Expect = 7e-07
Identities = 15/130 (11%), Positives = 37/130 (28%), Gaps = 19/130 (14%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFFDNPKVLP---------------DNLKTKLNVLN 113
D + + ++++L W + + + + P + L L
Sbjct: 9 DLQARARVHEYLGWHADCIRGTFGIPLWVQVLGPLIGVQVPEEKVERNRTAMDQALQWLE 68
Query: 114 EAI--SNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQK 171
+ FL T+AD+ + + L + W R+ +
Sbjct: 69 DKFLGDRPFLAGQQVTLADLMALEELMQP--VALGYELFEGRPRLAAWRGRVEAFLGAEL 126
Query: 172 ALKTWTEVLK 181
+ + +L
Sbjct: 127 CQEAHSIILS 136
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 133
Score = 46.9 bits (111), Expect = 1e-06
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 103 DNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYD 161
+ L KL L+ + S+ + + T D + + N++ +
Sbjct: 44 EQLPGKLRQLSRFLGSRSWFVGDKLTFVDFLAYDVLDQQRMFVP--DCPELQGNLSQFLQ 101
Query: 162 RISKLPQVQKALKT 175
R L ++ +++
Sbjct: 102 RFEALEKISAYMRS 115
>d2gsqa1 a.45.1.1 (A:76-202) Class sigma GST {Squid (Ommastrephes
sloani pacificus) [TaxId: 6634]}
Length = 127
Score = 44.7 bits (105), Expect = 5e-06
Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 17/120 (14%)
Query: 70 TKNESA-INQWLEWESVELFPSVLSFFDNP------------KVLPDNLKTKLNVLNEAI 116
T E +++ E ++F V+ P K +L
Sbjct: 5 TSLEKYRVDEITETLQ-DIFNDVVKIKFAPEAAKEAVQQNYEKSCKRLAPFLEGLLVSNG 63
Query: 117 SNS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
F + NS T+AD+ + + L + LL I R+++ P++ LK
Sbjct: 64 GGDGFFVGNSMTLADLHCYVALEVPLKHTP--ELLKDCPKIVALRKRVAECPKIAAYLKK 121
>d1tw9a1 a.45.1.1 (A:78-206) Class sigma GST {Heligmosomoides
polygyrus [TaxId: 6339]}
Length = 129
Score = 44.7 bits (105), Expect = 5e-06
Identities = 16/120 (13%), Positives = 45/120 (37%), Gaps = 20/120 (16%)
Query: 73 ESA-INQWLEWESVELFPSVLSFFDNP-------------KVLPDNLKTKLNVLNEAISN 118
ESA I+ + + + + +++ VL L + + +
Sbjct: 7 ESALIDSLADAYT-DYRAEMKTYYYTALGFMTGDVDKPKTDVLLPARTKFLGFITKFLKK 65
Query: 119 S---FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
+ FL+ + + D+ + V + + + + + +RI + P+++K ++T
Sbjct: 66 NSSGFLVGDKISWVDLLVAEHVADMTNRVP--EYIEGFPEVKAHMERIQQTPRIKKWIET 123
>d1tu7a1 a.45.1.1 (A:78-208) Class pi GST {Onchocerca volvulus
[TaxId: 6282]}
Length = 131
Score = 44.7 bits (105), Expect = 6e-06
Identities = 9/79 (11%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 98 PKVLPDNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNI 156
+LP L +L + + ++ + + AD ++ + L + +
Sbjct: 41 KSILPGELAKFEKLLATRGNGRNLILGDKISYADYALFEELDVHQILDP--HCLDKFPLL 98
Query: 157 TPWYDRISKLPQVQKALKT 175
++ R+ P++++ +
Sbjct: 99 KVFHQRMKDRPKLKEYCEK 117
>d1k0da1 a.45.1.1 (A:201-351) Yeast prion protein ure2p, nitrogen
regulation fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 151
Score = 45.3 bits (106), Expect = 6e-06
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 103 DNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYD 161
+ T + +L+ + T+AD+ + D + + + W
Sbjct: 82 YSAGTTPMSQSRFFDYPVWLVGDKLTIADLAFVPWNNVV--DRIGINIKIEFPEVYKWTK 139
Query: 162 RISKLPQVQKAL 173
+ + P V KAL
Sbjct: 140 HMMRRPAVIKAL 151
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 133
Score = 44.6 bits (105), Expect = 6e-06
Identities = 9/74 (12%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 103 DNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYD 161
L L + ++ + + + + T D + + L ++ N+ +
Sbjct: 44 QALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEP--SCLDAFPNLKDFIS 101
Query: 162 RISKLPQVQKALKT 175
R L ++ +K+
Sbjct: 102 RFEGLEKISAYMKS 115
>d2a2ra1 a.45.1.1 (A:78-209) Class pi GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 132
Score = 43.6 bits (102), Expect = 1e-05
Identities = 17/117 (14%), Positives = 44/117 (37%), Gaps = 13/117 (11%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFFDNP---------KVLPDNLKTKLNVLNEAISNS 119
D + + ++ + +L +S K LP LK +L++
Sbjct: 5 DQQEAALVDMVNDG-VEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQNQGGK 63
Query: 120 -FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALKT 175
F++ + + AD + + + L ++ ++ + R+S P+++ L +
Sbjct: 64 TFIVGDQISFADYNLLDLLLIHEVLAP--GCLDAFPLLSAYVGRLSARPKLKAFLAS 118
>d1duga1 a.45.1.1 (A:81-220) Class alpha GST {Schistosoma japonicum
[TaxId: 6182]}
Length = 140
Score = 43.8 bits (103), Expect = 2e-05
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 103 DNLKTKLNVLNEAISNS-FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYD 161
L L + + + + +L + T D ++ + +L L ++ + +
Sbjct: 43 SKLPEMLKMFEDRLCHKTYLNGDHVTHPDFMLYDALDVVLY--MDPMCLDAFPKLVCFKK 100
Query: 162 RISKLPQVQKALKT 175
RI +PQ+ K LK+
Sbjct: 101 RIEAIPQIDKYLKS 114
>d1k3ya1 a.45.1.1 (A:81-222) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 142
Score = 43.6 bits (102), Expect = 2e-05
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 17/119 (14%)
Query: 69 DTKNESAINQWLEWESVELFPSVLSFFDNP-------------KVLPDNLKTKLNVLNEA 115
D K + I+ ++E +L +L P K+ + ++
Sbjct: 5 DIKERALIDMYIEG-IADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFP-AFEKVLKS 62
Query: 116 ISNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKALK 174
+L+ N + ADI + +Y + L+SS+ + RIS LP V+K L+
Sbjct: 63 HGQDYLVGNKLSRADIHLVELLYYVEELDS--SLISSFPLLKALKTRISNLPTVKKFLQ 119
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 133
Score = 42.3 bits (99), Expect = 4e-05
Identities = 9/74 (12%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 103 DNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYD 161
+ K+ + +E + + + T D + + L ++ N+ +
Sbjct: 44 KTIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYHIFEP--KCLDAFPNLKDFLA 101
Query: 162 RISKLPQVQKALKT 175
R L ++ +K+
Sbjct: 102 RFEGLKKISAYMKS 115
>d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 127
Score = 42.0 bits (98), Expect = 5e-05
Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Query: 99 KVLPDNLKTKLNVLNEAIS--NSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNI 156
+ + + L L + + + L T AD+ ++ R LL Y +
Sbjct: 44 TLNAEVIPFYLEKLEQTVKDNDGHLALGKLTWADVYFAGITD-YMNYMVKRDLLEPYPAL 102
Query: 157 TPWYDRISKLPQVQKALKT 175
D ++ L ++ ++
Sbjct: 103 RGVVDAVNALEPIKAWIEK 121
>d2cvda1 a.45.1.1 (A:76-199) Class sigma GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 124
Score = 41.3 bits (96), Expect = 7e-05
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 103 DNLKTKLNVLNEAISN-SFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYD 161
N + L+ + +LI S T AD C L LL ++ +
Sbjct: 47 YNAPHLMQDLDTYLGGREWLIGMSVTWADFYWEICSTTL--LVFKPDLLDNHPRLVTLRK 104
Query: 162 RISKLPQVQKALKT 175
++ +P V +K
Sbjct: 105 KVQAIPAVANWIKR 118
>d1okta1 a.45.1.1 (A:86-211) Pf GST {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 126
Score = 41.2 bits (96), Expect = 8e-05
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 86 ELFPSVLSFFDNPKVLPDNLKTKLNVLNEAISNSFLIENSTTVADICIWTCVYPLLSDSK 145
E P +F+ K+L N N + + N+ T AD+ ++ + +
Sbjct: 41 EDLPKWSGYFE--KLLKKNHTNNNN------DKYYFVGNNLTYADLAVFNLYDDIETKYP 92
Query: 146 VRPLLSSYTNITPWYDRISKLPQVQKALKT 175
L ++ + + IS LP ++ +
Sbjct: 93 --SSLKNFPLLKAHNEFISNLPNIKNYITN 120
>d1e6ba1 a.45.1.1 (A:88-220) Class zeta GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 133
Score = 41.0 bits (95), Expect = 1e-04
Identities = 15/112 (13%), Positives = 36/112 (32%), Gaps = 16/112 (14%)
Query: 76 INQWLEWESVELFPSVLSFFDNPKVLPDNLKTK-----------LNVLNEAISNS---FL 121
Q + + P N++ K L + + N
Sbjct: 13 NYQAMSIVLSGIQPHQNLAVIRYIEEKINVEEKTAWVNNAITKGFTALEKLLVNCAGKHA 72
Query: 122 IENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
+ +AD+ + ++ ++ + + + Y + Y+ ++LP Q AL
Sbjct: 73 TGDEIYLADLFLAPQIHGAIN--RFQINMEPYPTLAKCYESYNELPAFQNAL 122
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica
[TaxId: 6192]}
Length = 136
Score = 39.2 bits (91), Expect = 5e-04
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 103 DNLKTKLNVLNEAIS-NSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYD 161
+L T + + ++ + N +L S + D ++ + + L + N+ +
Sbjct: 43 KDLPTTMKMWSDFLGKNPYLRGTSVSHVDFMVYEALDAIRY--LEPHCLDHFPNLQQFMS 100
Query: 162 RISKLPQVQKALKT 175
RI LP ++ +++
Sbjct: 101 RIEALPSIKAYMES 114
>d1fw1a1 a.45.1.1 (A:88-212) Class zeta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 125
Score = 37.7 bits (86), Expect = 0.002
Identities = 12/108 (11%), Positives = 30/108 (27%), Gaps = 13/108 (12%)
Query: 76 INQWLEWESVELFPSVLSFF----------DNPKVLPDNLKTKLNVLNEAISNSFLIENS 125
+ + + + P + L + ++ + + + +
Sbjct: 12 VRMISDLIAGGIQPLQNLSVLKQVGEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDE 71
Query: 126 TTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
T+AD+C+ V Y I+ R+ L Q +
Sbjct: 72 VTMADLCLVPQVANAERFKVDLT---PYPTISSINKRLLVLEAFQVSH 116
>d1eema1 a.45.1.1 (A:103-241) Class omega GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 139
Score = 36.0 bits (82), Expect = 0.007
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Query: 120 FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
F NS ++ D IW L K+ + + W + + P V L
Sbjct: 62 FFGGNSISMIDYLIWPWFE-RLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 114
>d1gwca1 a.45.1.1 (A:87-224) Class tau GST {Aegilops tauschii, also
known as Triticum tauschii [TaxId: 37682]}
Length = 138
Score = 34.1 bits (77), Expect = 0.028
Identities = 12/110 (10%), Positives = 30/110 (27%), Gaps = 14/110 (12%)
Query: 78 QWLEWESVELFPSVLSFF---------DNPKVLPDNLKTKLNVLNEAISN-SFLIENSTT 127
W+ + +L + + K + L E F +
Sbjct: 14 FWVAYVDDKLVAPWRQWLRGKTEEEKSEGKKQAFAAVGVLEGALRECSKGGGFFGGDGVG 73
Query: 128 VADICIWTCVYPLLSDSKVRPL----LSSYTNITPWYDRISKLPQVQKAL 173
+ D+ + + + + + + W +R +L + AL
Sbjct: 74 LVDVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVERFIELDAAKAAL 123
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke
(Schistosoma haematobium) [TaxId: 6185]}
Length = 123
Score = 33.5 bits (76), Expect = 0.045
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 103 DNLKTKLNVLNEAISNS---FLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTNITPW 159
+ L+++ E++ S + + T+AD+ + + ++D L Y I
Sbjct: 46 GKVPVLLDIICESLKASTGKLAVGDKVTLADLVLIAVID-HVTDLDKEFLTGKYPEIHKH 104
Query: 160 YDRISK-LPQVQKALKT 175
+ + P++ K L
Sbjct: 105 RENLLASSPRLAKYLSD 121
>d1oyja1 a.45.1.1 (A:86-230) Class tau GST {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 145
Score = 32.4 bits (73), Expect = 0.13
Identities = 11/106 (10%), Positives = 27/106 (25%), Gaps = 10/106 (9%)
Query: 78 QWLEWESVELFPSVLSFFDNP--------KVLPDNLKTKLNVLNEAISNSFLIENSTTVA 129
W ++ +L+ + + + + L+T L +
Sbjct: 21 FWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFV 80
Query: 130 DICIWTCVY--PLLSDSKVRPLLSSYTNITPWYDRISKLPQVQKAL 173
D+ + + + W R ++ V K L
Sbjct: 81 DVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHL 126
>d1z9ha1 a.45.1.1 (A:213-373) Microsomal prostaglandin E synthase-2
{Crab-eating macaque (Macaca fascicularis) [TaxId:
9541]}
Length = 161
Score = 30.6 bits (69), Expect = 0.56
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 98 PKVLPDNLKTKLNVLNEAI--SNSFLIENSTTVADICIWTCVYPLLSDSKVRPLLSSYTN 155
+ ++L + A+ F+ +AD+ ++ V ++ L +T+
Sbjct: 88 QDNVREDLYEAADKWVAAVGKDRPFMGGQKPNLADLAVY-GVLRVMEGLDAFDDLMQHTH 146
Query: 156 ITPWYDRISKLPQVQKA 172
I PWY R+ + + +A
Sbjct: 147 IQPWYLRVERA--ITEA 161
>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas
campestris [TaxId: 339]}
Length = 75
Score = 27.9 bits (62), Expect = 1.6
Identities = 14/58 (24%), Positives = 18/58 (31%), Gaps = 15/58 (25%)
Query: 27 DVELVDVADARLLLSK---TVPVLELDDGSQLFSANQSCLYLSKFDTKNESAINQWLE 81
V + D L S VPVL G +L FD + WL+
Sbjct: 27 AFFSVFIDDDAALESAYGLRVPVLRDPMGRELD---------WPFD---APRLRAWLD 72
>d1s78a4 g.3.9.1 (A:489-564) Protooncoprotein Her2 extracellular
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 26.3 bits (57), Expect = 6.3
Identities = 11/59 (18%), Positives = 16/59 (27%), Gaps = 13/59 (22%)
Query: 405 HCAQCDRFLADRFVEGVCPKC---RYEDARGDQCDGCGQLINAIELIQPRCKQCSQAPT 460
C C +FL + C E C C P C+ + + T
Sbjct: 17 QCVNCSQFLRGQECVEECRVLQGLPREYVNARHCLPC----------HPECQPQNGSVT 65
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 26.5 bits (58), Expect = 8.2
Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 806 LFRKIEQAQVDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAAVAT------QGN 859
L KI ++ + KYG + N + + A + + + + + A
Sbjct: 15 LPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNR 74
Query: 860 LVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATD 900
+ V ++ + K ++QL+ +K + TD
Sbjct: 75 YLV-VLYYNANRAFQKMDTKK---KEEQLKLLKEKYGINTD 111
Score = 26.5 bits (58), Expect = 8.2
Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 992 LFRKIEQAQVDEWKLKYGGQQNKESSNNKKEKKQAEITFSSVEELEAAVAT------QGN 1045
L KI ++ + KYG + N + + A + + + + + A
Sbjct: 15 LPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNR 74
Query: 1046 LVRQVKSSGVEKSEWQPHVDKLLSLKKQLEAMKSQQRAATD 1086
+ V ++ + K ++QL+ +K + TD
Sbjct: 75 YLV-VLYYNANRAFQKMDTKK---KEEQLKLLKEKYGINTD 111
>d2i8da1 d.198.4.1 (A:2-122) Uncharacterized protein LSEI2283
{Lactobacillus casei [TaxId: 1582]}
Length = 121
Score = 26.8 bits (59), Expect = 8.3
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 369 DYFGRTSTPQQTEIVQHLFDRVHKA 393
+++ R TP V+ LF +
Sbjct: 5 EWYQRIPTPDDLTRVESLFANMQAQ 29
>d2hxja1 a.136.1.1 (A:3-118) Hypothetical protein NMB1681 {Neisseria
meningitidis [TaxId: 487]}
Length = 116
Score = 26.3 bits (58), Expect = 9.2
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 673 IPEISPIHEDFLLLAL-INRELSAYYSVLDKAKLRDGIRYILNISRY 718
I + + F LAL I+++L A D A + + RY
Sbjct: 29 IYGKYDVFKRFKPLALGIDQDLIAALPQYDAALIARVLANHCRRPRY 75
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.127 0.361
Gapped
Lambda K H
0.267 0.0612 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,918,608
Number of extensions: 176870
Number of successful extensions: 463
Number of sequences better than 10.0: 1
Number of HSP's gapped: 417
Number of HSP's successfully gapped: 73
Length of query: 1175
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 1080
Effective length of database: 1,103,246
Effective search space: 1191505680
Effective search space used: 1191505680
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.4 bits)