Query psy7267
Match_columns 569
No_of_seqs 389 out of 3224
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 22:20:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bcv_A Putative glycosyltransf 99.9 8.7E-27 3E-31 227.9 19.6 199 89-314 4-219 (240)
2 3ckj_A Putative uncharacterize 99.9 5.1E-27 1.7E-31 243.9 17.5 215 88-328 46-272 (329)
3 3f1y_A Mannosyl-3-phosphoglyce 99.9 5E-27 1.7E-31 250.1 14.8 210 89-321 93-310 (387)
4 1xhb_A Polypeptide N-acetylgal 99.9 3.4E-25 1.2E-29 240.2 20.7 210 87-320 26-258 (472)
5 4hg6_A Cellulose synthase subu 99.9 1.1E-24 3.7E-29 251.8 22.3 233 86-352 136-391 (802)
6 1qg8_A Protein (spore coat pol 99.9 2.7E-25 9.4E-30 219.5 12.7 191 90-314 1-208 (255)
7 2d7i_A Polypeptide N-acetylgal 99.9 2E-24 6.9E-29 240.6 16.6 209 87-319 109-337 (570)
8 2ffu_A Ppgalnact-2, polypeptid 99.9 5.1E-24 1.8E-28 233.1 19.4 204 87-317 63-287 (501)
9 2bo4_A Mannosylglycerate synth 99.9 2.1E-22 7.3E-27 214.8 20.1 196 93-315 2-212 (397)
10 2z86_A Chondroitin synthase; G 99.9 2.2E-22 7.5E-27 225.3 17.6 193 88-315 373-567 (625)
11 2z86_A Chondroitin synthase; G 99.9 1.2E-21 4.1E-26 219.3 14.8 201 88-314 91-324 (625)
12 4fix_A UDP-galactofuranosyl tr 99.9 7.4E-21 2.5E-25 215.1 20.5 225 87-321 177-418 (657)
13 3l7i_A Teichoic acid biosynthe 99.8 6.7E-23 2.3E-27 234.3 0.0 194 89-312 1-197 (729)
14 2nxv_A ATP synthase subunits r 99.7 3.6E-17 1.2E-21 163.1 10.8 180 88-317 14-201 (249)
15 2zu9_A Mannosyl-3-phosphoglyce 99.7 3E-16 1E-20 166.0 17.4 233 90-348 51-338 (394)
16 2fy7_A Beta-1,4-galactosyltran 99.6 6.3E-16 2.2E-20 158.2 7.2 149 88-311 63-219 (287)
17 2wvl_A Mannosyl-3-phosphoglyce 99.6 1.8E-14 6.2E-19 149.1 15.5 170 89-283 52-262 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.8 1.3E-08 4.4E-13 106.4 9.9 104 91-206 3-125 (343)
19 2c0n_A A197; thermophil protei 97.9 2.3E-05 7.7E-10 74.9 8.7 107 178-312 51-168 (203)
20 3lw6_A FI08434P, beta-4-galact 97.6 0.0005 1.7E-08 69.3 12.2 149 87-313 48-205 (287)
21 3tqd_A 3-deoxy-manno-octuloson 96.1 0.042 1.4E-06 54.6 12.2 102 91-208 9-126 (256)
22 3k8d_A 3-deoxy-manno-octuloson 95.6 0.061 2.1E-06 53.7 10.8 103 89-207 16-134 (264)
23 4fce_A Bifunctional protein GL 94.4 0.33 1.1E-05 51.2 13.0 72 129-207 53-126 (459)
24 3oam_A 3-deoxy-manno-octuloson 94.1 0.75 2.6E-05 44.9 13.9 69 129-207 44-118 (252)
25 1qwj_A Cytidine monophospho-N- 93.7 1.2 4.1E-05 42.5 14.3 70 129-207 46-122 (229)
26 4fcu_A 3-deoxy-manno-octuloson 93.6 0.79 2.7E-05 45.2 13.2 71 128-208 43-119 (253)
27 3st8_A Bifunctional protein GL 92.8 1.5 5.1E-05 47.2 15.0 193 95-313 34-234 (501)
28 2v0h_A Bifunctional protein GL 91.7 3.2 0.00011 43.5 15.5 72 129-207 50-123 (456)
29 1v84_A Galactosylgalactosylxyl 91.6 0.81 2.8E-05 45.3 9.9 101 89-201 2-127 (253)
30 1ezi_A CMP-N-acetylneuraminic 90.9 1.1 3.6E-05 42.7 9.9 70 129-207 47-124 (228)
31 1h7e_A 3-deoxy-manno-octuloson 90.9 3.9 0.00013 39.0 14.0 70 128-207 44-116 (245)
32 3cu0_A Galactosylgalactosylxyl 90.5 1.1 3.7E-05 45.0 9.6 102 87-200 18-152 (281)
33 2d0j_A Galactosylgalactosylxyl 89.9 1.4 4.9E-05 43.4 9.9 100 89-200 2-120 (246)
34 2waw_A MOBA relate protein; un 89.8 1.5 5E-05 40.3 9.6 69 129-204 48-120 (199)
35 3f1c_A Putative 2-C-methyl-D-e 89.1 7 0.00024 37.6 14.3 75 129-208 50-133 (246)
36 2wee_A MOBA-related protein; u 88.7 1.3 4.5E-05 40.6 8.4 69 129-204 48-120 (197)
37 1hm9_A GLMU, UDP-N-acetylgluco 88.4 1.7 5.8E-05 45.9 10.1 52 156-207 75-129 (468)
38 2y6p_A 3-deoxy-manno-octuloson 87.5 6.9 0.00023 36.8 12.9 43 165-208 71-114 (234)
39 1vgw_A 4-diphosphocytidyl-2C-m 86.6 6.6 0.00023 36.9 12.2 72 129-207 52-131 (231)
40 4ecm_A Glucose-1-phosphate thy 86.3 4.7 0.00016 39.4 11.3 51 156-207 98-148 (269)
41 2yc3_A 2-C-methyl-D-erythritol 85.6 9 0.00031 35.9 12.5 75 128-208 49-126 (228)
42 1vic_A 3-deoxy-manno-octuloson 85.2 10 0.00035 36.7 13.0 71 128-208 43-119 (262)
43 2qh5_A PMI, ALGA, mannose-6-ph 84.1 5 0.00017 40.2 10.4 96 95-204 30-128 (308)
44 1i52_A 4-diphosphocytidyl-2-C- 84.1 4.1 0.00014 38.7 9.4 73 128-207 52-126 (236)
45 1e5k_A Molybdopterin-guanine d 83.3 3.7 0.00013 38.4 8.5 49 156-204 65-116 (201)
46 1omz_A Alpha-1,4-N-acetylhexos 82.1 0.94 3.2E-05 45.9 4.0 109 88-209 26-135 (293)
47 3ngw_A Molybdopterin-guanine d 81.6 7.6 0.00026 36.7 10.1 69 129-207 40-110 (208)
48 3d5n_A Q97W15_sulso; NESG, SSR 81.0 6.3 0.00022 36.6 9.2 49 156-205 61-112 (197)
49 3rsb_A Adenosylcobinamide-phos 80.9 0.85 2.9E-05 42.2 3.0 74 129-207 44-119 (196)
50 2xwl_A 2-C-methyl-D-erythritol 80.8 18 0.00063 33.4 12.5 87 102-205 30-118 (223)
51 1yp2_A Glucose-1-phosphate ade 80.4 3.9 0.00013 43.0 8.4 102 95-207 45-161 (451)
52 3q80_A 2-C-methyl-D-erythritol 79.8 24 0.00081 33.9 13.1 90 100-207 33-127 (231)
53 3pnn_A Conserved domain protei 78.0 4.2 0.00014 40.7 7.3 99 95-207 25-141 (303)
54 2ux8_A Glucose-1-phosphate uri 77.9 4.8 0.00016 39.9 7.7 53 156-208 107-161 (297)
55 2vsh_A TARI, 2-C-methyl-D-eryt 77.9 16 0.00055 34.1 11.1 43 165-207 83-133 (236)
56 3juk_A UDP-glucose pyrophospho 77.6 3.2 0.00011 40.7 6.2 54 155-208 95-152 (281)
57 2dpw_A Hypothetical protein TT 72.4 9.5 0.00032 36.2 7.9 77 100-203 30-107 (232)
58 2e8b_A Probable molybdopterin- 70.1 14 0.00047 34.3 8.3 94 90-202 13-120 (201)
59 2e3d_A UTP--glucose-1-phosphat 69.8 16 0.00054 36.1 9.1 53 156-208 103-162 (302)
60 1fxo_A Glucose-1-phosphate thy 68.8 11 0.00038 37.5 7.7 98 95-207 27-127 (293)
61 1w55_A ISPD/ISPF bifunctional 66.8 10 0.00035 39.4 7.2 67 129-207 49-116 (371)
62 1lvw_A Glucose-1-phosphate thy 62.4 26 0.0009 34.8 9.1 97 95-207 28-128 (295)
63 3tzt_A Glycosyl transferase fa 61.5 19 0.00065 35.5 7.8 105 90-203 4-122 (276)
64 3cgx_A Putative nucleotide-dip 58.6 52 0.0018 31.8 10.2 50 157-207 77-130 (242)
65 2pa4_A UTP-glucose-1-phosphate 55.9 16 0.00053 36.7 6.1 52 156-207 106-160 (323)
66 2xme_A CTP-inositol-1-phosphat 55.8 15 0.00051 34.6 5.7 69 129-203 61-130 (232)
67 1mc3_A Glucose-1-phosphate thy 54.6 15 0.00053 36.5 5.8 97 95-207 28-128 (296)
68 3brk_X Glucose-1-phosphate ade 53.8 16 0.00056 37.9 6.0 99 95-207 37-151 (420)
69 1tzf_A Glucose-1-phosphate cyt 53.8 78 0.0027 29.8 10.6 45 163-208 103-148 (259)
70 1vpa_A 2-C-methyl-D-erythritol 46.4 78 0.0027 29.4 9.1 92 100-207 39-134 (234)
71 2j0a_A Beta-1,3-N-acetylglucos 37.9 36 0.0012 33.7 5.3 107 179-311 92-208 (280)
72 2x65_A Mannose-1-phosphate gua 37.4 51 0.0017 33.3 6.5 96 95-204 27-124 (336)
73 1dp7_P MHC class II transcript 33.9 5.9 0.0002 31.9 -1.0 38 427-465 29-66 (76)
74 2gak_A Beta-1,6-N-acetylglucos 33.1 1.6E+02 0.0055 30.4 9.7 107 88-207 82-198 (391)
75 3lor_A Thiol-disulfide isomera 30.4 2.4E+02 0.0083 23.6 11.5 85 122-207 59-155 (160)
76 2px7_A 2-C-methyl-D-erythritol 27.8 76 0.0026 29.9 5.6 50 156-207 83-133 (236)
77 3erw_A Sporulation thiol-disul 24.9 2.8E+02 0.0096 22.5 9.0 66 122-193 62-127 (145)
78 1g9r_A Glycosyl transferase; a 23.7 59 0.002 32.3 4.1 75 127-203 30-117 (311)
79 4evw_A Nucleoside-diphosphate- 21.1 1.4E+02 0.0049 28.5 6.2 70 129-199 48-124 (255)
No 1
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.95 E-value=8.7e-27 Score=227.86 Aligned_cols=199 Identities=15% Similarity=0.153 Sum_probs=141.9
Q ss_pred CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267 89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK 168 (569)
Q Consensus 89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk 168 (569)
.|+||||||+||+++.|.++|+|+++| .|+ ++|||||||||+|+|.++++++.+++ +++++++ .+|.|+
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~q------~~~--~~eiIvvDd~S~d~t~~~~~~~~~~~--~~i~~i~-~~n~G~ 72 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLAQ------TLS--DIEIILIDDESPDNCPKICDDYAAQY--PNIKVIH-KKNAGL 72 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHTC------SSS--SEEEEEEECCCSSSHHHHHHHHHHHC--SSEEEEE-CCCCCH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHhC------cCC--CeEEEEEECCCCcCHHHHHHHHHhhC--CCEEEEE-CCCCCh
Confidence 578999999999999999999999887 555 78999999999999999999998887 7899997 679999
Q ss_pred HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHH-
Q psy7267 169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRN- 247 (569)
Q Consensus 169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~- 247 (569)
+.|+|.|+++|+||||+++|+|+.++|++|+++++.+++. +.+++++.......++.........
T Consensus 73 ~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~~~~~ 138 (240)
T 3bcv_A 73 GMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKY--------------TCDAVFTGLKRITMAGIPTGTVTHQK 138 (240)
T ss_dssp HHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHH--------------TCSEEEC-------------------
T ss_pred HHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhc--------------CCCEEEEeeEEEccCCcccccccccc
Confidence 9999999999999999999999999999999999999873 3456655443222221100000000
Q ss_pred ----Hhh--hhhhhHhhhcccc------cccccccceeeEeHHHHHHHhcc-ccCCc---hhhchHHHHHHHHcCCCEEE
Q psy7267 248 ----ILM--KGFHFIVWFTGVR------TIRDTQCGFKLFTRKSALQLFSS-IHVQR---WAFDVELLFIAEVLHIPMAE 311 (569)
Q Consensus 248 ----~~~--~~~~~l~~~~~~~------~i~d~~~gf~lfrR~al~~I~~~-~~~e~---~~~D~EL~~Ra~~~G~rI~~ 311 (569)
... .....+....... ......++..++||++++++ + .+++. ..+|.+++.|+..+|+++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~--g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~ 216 (240)
T 3bcv_A 139 EFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKK--HLRFVSERILPSEDLIFNVDVLANSNIVCV 216 (240)
T ss_dssp -CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHT--TCCCCCTTTCTTHHHHHHHHHHTTCSCEEE
T ss_pred ccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHHHc--CCccCCCCCccCCCHHHHHHHHHhCCEEEE
Confidence 000 0000000111100 00112245679999999997 4 34333 45799999999999999999
Q ss_pred EEE
Q psy7267 312 VSV 314 (569)
Q Consensus 312 vPv 314 (569)
+|.
T Consensus 217 ~~~ 219 (240)
T 3bcv_A 217 LPQ 219 (240)
T ss_dssp CC-
T ss_pred ECC
Confidence 874
No 2
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.94 E-value=5.1e-27 Score=243.85 Aligned_cols=215 Identities=18% Similarity=0.118 Sum_probs=157.2
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEE-cCCCC
Q psy7267 88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLK-LLKNR 166 (569)
Q Consensus 88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~-~~~n~ 166 (569)
..|+||||||+|||++.|.++|+++++| .||. .+|||||||||+|+|.++++++..+.. .+++++. +++|.
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q------~~~~-~~eiivVDdgS~D~t~~~~~~~~~~~~-~~~~~~~~~~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPL------VDGL-VDELIVLDSGSTDDTEIRAVAAGARVV-SREQALPEVPIRP 117 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGG------BTTT-BSEEEEEECSCCSSHHHHHHHTTCEEE-EHHHHCTTSCCCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHh------hCCC-CcEEEEEeCCCCchHHHHHHHhhhhhc-cceeeeccCCCCC
Confidence 4578999999999999999999999987 4552 589999999999999999998754310 1222332 67899
Q ss_pred ChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccc-cc------
Q psy7267 167 GKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEA-LA------ 238 (569)
Q Consensus 167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~-~~------ 238 (569)
|++.|+|.|++.|+||||+++|+|+. ++|++|+++++.+.++ +++++|+|.+..... ++
T Consensus 118 G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~-------------~~~~~v~g~~~~~~~~~~~~~~~~ 184 (329)
T 3ckj_A 118 GKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTG-------------DGVHLVKSFYRRPLNVGDAGGGAG 184 (329)
T ss_dssp SHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSC-------------SSCCEEEEEEECC-----------
T ss_pred CHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhC-------------CCccEEEEEecccccCCccccccc
Confidence 99999999999999999999999999 8999999999997764 577899987754321 11
Q ss_pred -chhhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHH-cCCC-EEEEEEE
Q psy7267 239 -NVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEV-LHIP-MAEVSVN 315 (569)
Q Consensus 239 -~~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~-~G~r-I~~vPv~ 315 (569)
..................... ...+.+..++++++||++++++ + +.++|.+|.|++.++.+ .|++ +.++|+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~rr~~l~~i--~-f~~~~~~D~~l~~r~~~~~g~~~i~~v~~~ 259 (329)
T 3ckj_A 185 ATGGGRVTELVARPLLAALRPE--LGCILQPLGGEYAATRELLTSV--P-FAPGYGVEIGLLVDTFDRLGLDAIAQVNLG 259 (329)
T ss_dssp ----CHHHHHTHHHHHHHHCGG--GGGCSCTTCSCEEEEHHHHTTS--C-BCCGGGHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred ccCCCceehhhHHHHHHHhhhh--hccccCCCccceeeeHHHHHhC--C-CCCCCcccHHHHHHHHHhcCCccEeeecce
Confidence 000001111001111111011 1235567788999999999998 4 35788899999999986 6775 9999999
Q ss_pred EEEecCCccchhH
Q psy7267 316 WTEIEGSKIVPVF 328 (569)
Q Consensus 316 ~~~~~GS~~~~~~ 328 (569)
|+.+.+|......
T Consensus 260 ~r~h~~s~~~~~~ 272 (329)
T 3ckj_A 260 VREHRNRPLAELG 272 (329)
T ss_dssp ECEECCCCGGGHH
T ss_pred EEecCCCcHHHHH
Confidence 9888876654433
No 3
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.94 E-value=5e-27 Score=250.08 Aligned_cols=210 Identities=15% Similarity=0.119 Sum_probs=156.0
Q ss_pred CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267 89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK 168 (569)
Q Consensus 89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk 168 (569)
.|+||||||+|||++.|+++|+++.+++. +||. ++|||||||||+|+|.++++++.++.....++++.+++|.|+
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~----~~~~-~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~ 167 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNE----RAPL-IDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGK 167 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHH----HSCC-CSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHh----cCCC-CeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCH
Confidence 47799999999999999999999988554 3432 689999999999999999998754321012223445679999
Q ss_pred HHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccccc-c----hhh
Q psy7267 169 GGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALA-N----VQR 242 (569)
Q Consensus 169 a~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~-~----~~~ 242 (569)
+.|+|.|++.|+||||+++|+|+. ++|++|+++++.+.+. +++++|.|.+......+ . ...
T Consensus 168 g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~-------------p~~d~v~G~~~~~~~~~~~~~~~~~g 234 (387)
T 3f1y_A 168 GDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEV-------------PGVRFVKAAYRRPFRKGESIEEDGGG 234 (387)
T ss_dssp HHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHS-------------TTCCEEEEEEECC-------CCBCCS
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHC-------------CCceEEEEeeccccccccccccccCC
Confidence 999999999999999999999999 8999999999999874 47799999875432111 0 000
Q ss_pred HHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHH-HcCCC-EEEEEEEEEEec
Q psy7267 243 SFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAE-VLHIP-MAEVSVNWTEIE 320 (569)
Q Consensus 243 ~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~-~~G~r-I~~vPv~~~~~~ 320 (569)
...+.+.......+... ..++.++.+|+++|+|++++++ .+ .++|.+|+||+.++. +.|++ |.++|+.++++.
T Consensus 235 ~v~~~~~~~l~~~~~~~--l~~~~d~~sG~~a~rR~~l~~i--~f-~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~ 309 (387)
T 3f1y_A 235 RVTELTAKPLFNLFYPE--LAGFVQPLAGEFVADRELFCSI--PF-LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNR 309 (387)
T ss_dssp HHHHHTHHHHHHHHCGG--GTTCSCTTCSCEEEEHHHHTTS--CE-ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCC
T ss_pred chhhhhHHHHHHHHhHh--hccccccccccEEEEHHHHHhC--CC-CCCcchHHHHHHHHHHhcCCCeEEEEecceeecC
Confidence 11111111111111111 1257888999999999999998 33 478999999999984 56997 999999997765
Q ss_pred C
Q psy7267 321 G 321 (569)
Q Consensus 321 G 321 (569)
.
T Consensus 310 ~ 310 (387)
T 3f1y_A 310 H 310 (387)
T ss_dssp C
T ss_pred C
Confidence 5
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.93 E-value=3.4e-25 Score=240.17 Aligned_cols=210 Identities=16% Similarity=0.072 Sum_probs=153.1
Q ss_pred CCCccEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCcc-HHHHHHHHhHhhCCC-eEEEEEcC
Q psy7267 87 EPSVNLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDK-TMQVVHQYTEKCGED-IVRGLKLL 163 (569)
Q Consensus 87 ~~~p~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~-T~eil~~~~~~~~~~-~V~vi~~~ 163 (569)
..+|+||||||+|||+ +.|.++|+|++++ .||...+|||||||||+|+ |.++++++.+++ + ++++++++
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q------~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~--~~~v~vi~~~ 97 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINR------SPRHMIEEIVLVDDASERDFLKRPLESYVKKL--KVPVHVIRME 97 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHS------SCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS--SSCEEEEECS
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhc------CcHhHceEEEEEECCCCcHHHHHHHHHHHHHC--CCcEEEEECC
Confidence 4578899999999999 9999999999987 5554458999999999995 999999998877 5 89999999
Q ss_pred CCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhh-
Q psy7267 164 KNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQR- 242 (569)
Q Consensus 164 ~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~- 242 (569)
+|.|++.|+|.|+++|+||||+++|+|+.++|++|+++++.+++.+ ..++++.....+.+.....
T Consensus 98 ~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~--------------~~~v~~~~~~~~~~~~~~~~ 163 (472)
T 1xhb_A 98 QRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDR--------------RTVVCPIIDVISDDTFEYMA 163 (472)
T ss_dssp SCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCT--------------TEEEEEEEEEECSSSCCEEC
T ss_pred CCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCC--------------CEEEEeeeeeEcCCCceecc
Confidence 9999999999999999999999999999999999999999998752 2334443322222111000
Q ss_pred --HHHHHHhhhh----h------hhHhhh---cccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHH
Q psy7267 243 --SFFRNILMKG----F------HFIVWF---TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAE 303 (569)
Q Consensus 243 --~~~r~~~~~~----~------~~l~~~---~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~ 303 (569)
........+. . ....+. ..........+++.+++|++++++ +.+++.+ .+|+||++|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--Ggfde~~~~~g~ED~dl~~R~~ 241 (472)
T 1xhb_A 164 GSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI--GTYDAGMDIWGGENLEISFRIW 241 (472)
T ss_dssp CCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHT--TSCCTTSCTTCCCCSHHHHHHH
T ss_pred CCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHc--CCCCCcccccCchhHHHHHHHH
Confidence 0000000000 0 000000 001122234567789999999999 5555544 46999999999
Q ss_pred HcCCCEEEEEEEEEEec
Q psy7267 304 VLHIPMAEVSVNWTEIE 320 (569)
Q Consensus 304 ~~G~rI~~vPv~~~~~~ 320 (569)
+.|+++.++|.....|.
T Consensus 242 ~~G~~i~~~p~~~v~H~ 258 (472)
T 1xhb_A 242 QCGGTLEIVTCSHVGHV 258 (472)
T ss_dssp HTTCEEEEEEEEEEEEE
T ss_pred hcCCeEEEccCcEEEEE
Confidence 99999999997655444
No 5
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.92 E-value=1.1e-24 Score=251.84 Aligned_cols=233 Identities=12% Similarity=0.037 Sum_probs=159.7
Q ss_pred CCCCccEEEEEeecCCCCCh-HHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHH---------------HHHHHHh
Q psy7267 86 DEPSVNLSVIVPAYNEQDRL-KPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTM---------------QVVHQYT 149 (569)
Q Consensus 86 ~~~~p~VSVIIP~yNE~~~I-~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~---------------eil~~~~ 149 (569)
+...|+|||+||+|||++.+ +++|+|+.+| +||.+++||+||||||+|+|. +.++++.
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q------~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~ 209 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNM------IYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLC 209 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTS------SCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhc------cCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHH
Confidence 45578999999999999766 8899999887 899878999999999999993 3344554
Q ss_pred HhhCCCeEEEEEcCCC-CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEE
Q psy7267 150 EKCGEDIVRGLKLLKN-RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIV 228 (569)
Q Consensus 150 ~~~~~~~V~vi~~~~n-~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~ 228 (569)
++. +++++..++| .||+.|+|.|++.+++|||+++|+|+.++|++++++++.++++ ++.++|+
T Consensus 210 ~~~---~v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~d-------------p~v~~V~ 273 (802)
T 4hg6_A 210 REL---GVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVED-------------PDLFLVQ 273 (802)
T ss_dssp HHH---TCEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHS-------------SSCCEEE
T ss_pred Hhc---CcEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcC-------------CCeEEEe
Confidence 443 5777776766 7899999999999999999999999999999999999999764 4667777
Q ss_pred eeeeecccccchhhH-HHHHHh---hhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHH
Q psy7267 229 GSRAHLEALANVQRS-FFRNIL---MKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEV 304 (569)
Q Consensus 229 G~r~~~~~~~~~~~~-~~r~~~---~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~ 304 (569)
|.....+.+...... ...... ....................+++.++||++++++ ++...+.+.+|.|++.|+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v-Ggf~~~~~~ED~~l~~rl~~ 352 (802)
T 4hg6_A 274 TPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA-GGFAGETITEDAETALEIHS 352 (802)
T ss_dssp CCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH-TTCCCSSSSHHHHHHHHHHT
T ss_pred ccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc-CCcCCCCcchHHHHHHHHHH
Confidence 755443332111000 000000 0000000000000011123456689999999998 33444567799999999999
Q ss_pred cCCCEEEEEEEEEEe--cCCccchhHHHHHHHHHHHHHHHHhcchhhHHH
Q psy7267 305 LHIPMAEVSVNWTEI--EGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK 352 (569)
Q Consensus 305 ~G~rI~~vPv~~~~~--~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~ 352 (569)
.|+++.++|.....+ +.+. ...++++.||..|.++..
T Consensus 353 ~G~ri~~~~~~~~~~~~p~t~-----------~~~~~Qr~RW~~G~~q~l 391 (802)
T 4hg6_A 353 RGWKSLYIDRAMIAGLQPETF-----------ASFIQQRGRWATGMMQML 391 (802)
T ss_dssp TTCCEEECCCCCEEECCCCSH-----------HHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEecCCEEEecCCCCH-----------HHHHHHHHHHHccHHHHH
Confidence 999999997443333 2233 345555666666655443
No 6
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.92 E-value=2.7e-25 Score=219.46 Aligned_cols=191 Identities=14% Similarity=0.161 Sum_probs=143.1
Q ss_pred ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC------
Q psy7267 90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL------ 163 (569)
Q Consensus 90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~------ 163 (569)
|+||||||+||+++.|.++|+|+++| +|| ++|||||||||+|+|.++++++.+ . +++++++.+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q------~~~--~~eiivvDd~S~d~t~~~~~~~~~-~--~~i~~i~~~~~~~~~ 69 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQ------TFS--DFELFIMDDNSNEETLNVIRPFLN-D--NRVRFYQSDISGVKE 69 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTC------SCC--CEEEEEEECSCCHHHHHHHGGGGG-S--TTEEEEECCCCSHHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhc------cCC--ceEEEEEECCCCchHHHHHHHHhh-c--CCEEEEecccccccc
Confidence 56999999999999999999999987 565 799999999999999999999866 3 789999988
Q ss_pred --CCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeec--ccccc
Q psy7267 164 --KNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHL--EALAN 239 (569)
Q Consensus 164 --~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~--~~~~~ 239 (569)
+|.|++.|+|.|+++|+||||+++|+|+.++|++|+++++.++++ ++++++.+..... +..+.
T Consensus 70 ~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~ 136 (255)
T 1qg8_A 70 RTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTH-------------PEKAVIYSASKTYHLNENRD 136 (255)
T ss_dssp HHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHC-------------TTCCEEEEEEEEEEEC---C
T ss_pred cccccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhC-------------CCceEEEeceEEEEeCCCCc
Confidence 899999999999999999999999999999999999999999985 4667777765433 22111
Q ss_pred hhhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccc---c--CC--chhhchHHHHHHHHcCCCEEEE
Q psy7267 240 VQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSI---H--VQ--RWAFDVELLFIAEVLHIPMAEV 312 (569)
Q Consensus 240 ~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~---~--~e--~~~~D~EL~~Ra~~~G~rI~~v 312 (569)
..... .... . .... .......++..++||++++++-.+. . ++ ...+|.+++.|+.+.| ++..+
T Consensus 137 ~~~~~----~~~~-~---~~~~-~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~ 206 (255)
T 1qg8_A 137 IVKET----VRPA-A---QVTW-NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPL 206 (255)
T ss_dssp EEEEE----EECC-C---SCBS-CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEE
T ss_pred chhhc----cCch-H---HHHH-hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEe
Confidence 00000 0000 0 0000 1112233456799999999981011 1 22 2456999999999987 68888
Q ss_pred EE
Q psy7267 313 SV 314 (569)
Q Consensus 313 Pv 314 (569)
|.
T Consensus 207 ~~ 208 (255)
T 1qg8_A 207 DE 208 (255)
T ss_dssp EE
T ss_pred cC
Confidence 74
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.91 E-value=2e-24 Score=240.61 Aligned_cols=209 Identities=19% Similarity=0.135 Sum_probs=152.6
Q ss_pred CCCccEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH-HHHHHHHhHhhCCCeEEEEEcCC
Q psy7267 87 EPSVNLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT-MQVVHQYTEKCGEDIVRGLKLLK 164 (569)
Q Consensus 87 ~~~p~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T-~eil~~~~~~~~~~~V~vi~~~~ 164 (569)
...|+||||||+|||+ +.|.++|+|++++ .||...+|||||||||+|+| .++++++.+++ ++|+++++++
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~q------t~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~--~~v~vi~~~~ 180 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNR------SPPELVAEIVLVDDFSDREHLKKPLEDYMALF--PSVRILRTKK 180 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHH------SCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS--TTEEEEECSS
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhc------CCccCcEEEEEEECCCCcHHHHHHHHHHHHhC--CeEEEEECCC
Confidence 3468899999999999 9999999999998 55544569999999999999 99999998877 7899999999
Q ss_pred CCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHH
Q psy7267 165 NRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSF 244 (569)
Q Consensus 165 n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~ 244 (569)
|.|++.|+|.|+++|+||||+++|+|+.++|++|+.+++.+.+.+ ..++.+.....+.........
T Consensus 181 n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~--------------~~vv~~~i~~~~~~~~~~~~~ 246 (570)
T 2d7i_A 181 REGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNR--------------KTIVCPMIDVIDHDDFRYETQ 246 (570)
T ss_dssp CCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCT--------------TEEEEEEEEEECTTTCCEECC
T ss_pred CCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCC--------------CEEEeeeeeccCCCchhhccc
Confidence 999999999999999999999999999999999999999998842 123332221111111100000
Q ss_pred ----HHHHhhhh--hhhH--------hhhcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcC
Q psy7267 245 ----FRNILMKG--FHFI--------VWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLH 306 (569)
Q Consensus 245 ----~r~~~~~~--~~~l--------~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G 306 (569)
.+....+. ...+ .............+++.+++|++++++ +.+++.+ .+|+||++|+.+.|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--GgfDe~~~~~g~ED~dl~~Rl~~~G 324 (570)
T 2d7i_A 247 AGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWEL--GGYDPGLEIWGGEQYEISFKVWMCG 324 (570)
T ss_dssp TTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHT--TSSCTTCCSSSSHHHHHHHHHHHTT
T ss_pred cCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhc--CCCCCcccccCcchHHHHHHHHhCC
Confidence 00000000 0000 000001122334577889999999999 5555554 57999999999999
Q ss_pred CCEEEEEEEEEEe
Q psy7267 307 IPMAEVSVNWTEI 319 (569)
Q Consensus 307 ~rI~~vPv~~~~~ 319 (569)
+++.++|.....+
T Consensus 325 ~~i~~~p~~~v~H 337 (570)
T 2d7i_A 325 GRMEDIPCSRVGH 337 (570)
T ss_dssp CEEEEEEEEEEEE
T ss_pred CeEEEccCeEEEE
Confidence 9999999765544
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.91 E-value=5.1e-24 Score=233.07 Aligned_cols=204 Identities=16% Similarity=0.057 Sum_probs=146.6
Q ss_pred CCCccEEEEEeecCCCC-ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC
Q psy7267 87 EPSVNLSVIVPAYNEQD-RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN 165 (569)
Q Consensus 87 ~~~p~VSVIIP~yNE~~-~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n 165 (569)
..+|+||||||+|||++ .|.++|+|++++ .||...+|||||||||+|+|.+.+ .+++ ++++++++++|
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q------~~~~~~~EIIvVDDgS~D~t~~~~---~~~~--~~v~vi~~~~n 131 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLKK------SPPHLIKEIILVDDYSNDPEDGAL---LGKI--EKVRVLRNDRR 131 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHH------SCGGGEEEEEEEECSCSCTHHHHG---GGGB--TTEEEEECSSC
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHhh------CchhhceeEEEEECCCCchHHHHH---HhcC--CCEEEEECCCC
Confidence 45788999999999997 899999999998 555445799999999999996432 3445 68999999999
Q ss_pred CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchh----
Q psy7267 166 RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQ---- 241 (569)
Q Consensus 166 ~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~---- 241 (569)
.|++.|+|.|+++|+||||+++|+|+.++|++|+++++.+++. ..++|.+.....+.+....
T Consensus 132 ~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~--------------~~~vv~~~~~~~~~~~~~~~~~~ 197 (501)
T 2ffu_A 132 EGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAED--------------RTRVVSPIIDVINMDNFQYVGAS 197 (501)
T ss_dssp CHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHC--------------TTEEEEEEEEEECTTTCCEECBC
T ss_pred cCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhC--------------CCeEEEeeeccCcCCCceeecCC
Confidence 9999999999999999999999999999999999999999884 2245554432222211100
Q ss_pred ----hHHHHHHhh----h-hhhhHhh---hcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHc
Q psy7267 242 ----RSFFRNILM----K-GFHFIVW---FTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVL 305 (569)
Q Consensus 242 ----~~~~r~~~~----~-~~~~l~~---~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~ 305 (569)
..+...... . ......+ ...........+++.+++|++++++ +.+++.+ .+|+||++|+.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--Ggfde~~~~~g~ED~dl~~Rl~~~ 275 (501)
T 2ffu_A 198 ADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEEL--GKYDMMMDVWGGENLEISFRVWQC 275 (501)
T ss_dssp SSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHT--TCCCTTCCSSSSHHHHHHHHHHHT
T ss_pred cccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHh--CCCCccccccCcchHHHHHHHHhc
Confidence 000000000 0 0000000 0011122345567899999999999 5555544 6799999999999
Q ss_pred CCCEEEEEEEEE
Q psy7267 306 HIPMAEVSVNWT 317 (569)
Q Consensus 306 G~rI~~vPv~~~ 317 (569)
|+++.++|....
T Consensus 276 G~~i~~~p~~~v 287 (501)
T 2ffu_A 276 GGSLEIIPCSRV 287 (501)
T ss_dssp TCEEEEEEEEEE
T ss_pred CCeEEEccCcEE
Confidence 999999995443
No 9
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.89 E-value=2.1e-22 Score=214.81 Aligned_cols=196 Identities=16% Similarity=0.126 Sum_probs=139.4
Q ss_pred EEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhC-C--CeEEEEEcC--C--C
Q psy7267 93 SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG-E--DIVRGLKLL--K--N 165 (569)
Q Consensus 93 SVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~-~--~~V~vi~~~--~--n 165 (569)
|||||.+||+ .|+.+++++..... +| .+|||||||||+|+|.++++++.++.+ . .++.++... . |
T Consensus 2 slVIiP~~eE-~I~~vl~~l~~~~~-----~~--~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n 73 (397)
T 2bo4_A 2 SLVVFPFKHE-HPEVLLHNVRVAAA-----HP--RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLR 73 (397)
T ss_dssp CEEEEECCSS-CHHHHHHHHHHHHH-----ST--TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSS
T ss_pred cEEEEeCCcc-CHHHHHHHHHHhcc-----CC--CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCC
Confidence 4555555654 68888888764321 22 579999999999999999997765542 1 233333222 3 8
Q ss_pred CChHHHHHHHH----HhccCcEEEEEcCCCC-CChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccch
Q psy7267 166 RGKGGAVTLGT----KCARGSIILFADADGA-TKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANV 240 (569)
Q Consensus 166 ~Gka~AlN~Gl----~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~ 240 (569)
.||+.|++.|+ +.++||+|+++|||.+ ++|+++.+|++.+++ ++|+|+|.+.....++..
T Consensus 74 ~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~---------------g~D~V~g~~~r~~~~~~~ 138 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF---------------GYGLVRHYFPRASTDAMI 138 (397)
T ss_dssp SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT---------------TCSEEEEECCCCTTSCHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc---------------CCCEEEEEeccccCCcHH
Confidence 99999999999 8899999999999996 899999999998854 579999975432223322
Q ss_pred hhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccc---cCCchhhchHHHHHHHHcCCCEEEEEEE
Q psy7267 241 QRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSI---HVQRWAFDVELLFIAEVLHIPMAEVSVN 315 (569)
Q Consensus 241 ~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~---~~e~~~~D~EL~~Ra~~~G~rI~~vPv~ 315 (569)
.+...+.++...+ .......+.++.+|+++|+|++++++.... ...+|.+|+++..++.+.|++|.++|+.
T Consensus 139 ~~~~~~~ll~~~~----~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 139 TWMITRTGFALLW----PHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp HHHTHHHHHHHHC----TTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred HHHHHHHHHHHHH----HHhhccccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 2222222211111 111122667888999999999999983211 4568889999999999999999999863
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.88 E-value=2.2e-22 Score=225.29 Aligned_cols=193 Identities=18% Similarity=0.203 Sum_probs=146.6
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267 88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG 167 (569)
Q Consensus 88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G 167 (569)
.+|.||||||+||+++.|.++|+|+++| .|+ ++|||||||||+|+|.++++++.+++ ++++++. .+|.|
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q------~~~--~~eiivvdd~S~d~t~~~~~~~~~~~--~~i~~~~-~~n~G 441 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQ------TIT--DLEVCICDDGSTDDTLRILQEHYANH--PRVRFIS-QKNKG 441 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSS------SCC--SEEEEEEEESCSSSHHHHHHHHHTTC--TTEEEEE-ECCCC
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhC------cCC--CeEEEEEECcCChhHHHHHHHHHhhC--CcEEEEe-CCCCC
Confidence 4578999999999999999999999987 555 78999999999999999999987776 6899987 78999
Q ss_pred hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHH
Q psy7267 168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRN 247 (569)
Q Consensus 168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~ 247 (569)
++.|+|.|++.|+||||+++|+|+.++|++|+++++.++++ ++.+++.+.....+..+........
T Consensus 442 ~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~~- 507 (625)
T 2z86_A 442 IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKD-------------LSLACVYTTNRNIDREGNLISNGYN- 507 (625)
T ss_dssp HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHC-------------TTCSEEEEEEEEECTTSCEEEECCC-
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhC-------------CCeeEEEeeeEEECCCCCEeccCcc-
Confidence 99999999999999999999999999999999999999875 4556676654433322111000000
Q ss_pred HhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCch--hhchHHHHHHHHcCCCEEEEEEE
Q psy7267 248 ILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW--AFDVELLFIAEVLHIPMAEVSVN 315 (569)
Q Consensus 248 ~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~--~~D~EL~~Ra~~~G~rI~~vPv~ 315 (569)
. .... ...... ....+++.+++|++++++ +.+++.+ .+|.||+.|+.+.| ++.++|..
T Consensus 508 ~--~~~~--~~~~~~---~~~~~~~~~~~r~~~~~~--ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~ 567 (625)
T 2z86_A 508 W--PIYS--REKLTS---AMICHHFRMFTARAWNLT--EGFNESISNAVDYDMYLKLSEVG-PFKHINKI 567 (625)
T ss_dssp C--SSCC--HHHHTT---SCCCCSCEEEEHHHHTTT--TCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEE
T ss_pred c--ccCC--HHHHhh---cccCCceEEEEHHHHHHh--CCCCCccCChHHHHHHHHHHHhC-CEEEeCCc
Confidence 0 0000 000001 112345679999999998 5555543 57999999999999 89988843
No 11
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.86 E-value=1.2e-21 Score=219.29 Aligned_cols=201 Identities=17% Similarity=0.153 Sum_probs=144.3
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC-C
Q psy7267 88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN-R 166 (569)
Q Consensus 88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n-~ 166 (569)
.+|+||||||+||+++.|.++|+++.+| +++. ++|||||||||+|+|.++++++.+. .+++++..+.+ .
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q------~~~~-~~eiivvDd~s~d~t~~~~~~~~~~---~~i~~i~~~~~~~ 160 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQ------KTIY-DYEVIVADDGSKENIEEIVREFESL---LNIKYVRQKDYGY 160 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTC------CCSS-CEEEEEEEESCSSCHHHHHHTTTTT---SCEEEEEECCCSC
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhh------ccCC-CeEEEEEeCCCchhHHHHHHHhhhc---CCeEEEEeCCCCc
Confidence 3578999999999999999999988876 4443 7999999999999999999988544 57888886643 4
Q ss_pred ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHH
Q psy7267 167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR 246 (569)
Q Consensus 167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r 246 (569)
|++.|+|.|++.|+||||+++|+|+.++|++|+.+++.++++ ....++|.+...............
T Consensus 161 g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~ 226 (625)
T 2z86_A 161 QLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVD--------------DNVALIGPRKYIDTSKHTYLDFLS 226 (625)
T ss_dssp CHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHC--------------TTEEEECCEEEECCTTCCHHHHHH
T ss_pred chhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcC--------------CceEEEEeeeeccCcccchhhccc
Confidence 699999999999999999999999999999999999999874 224555555433222210000000
Q ss_pred --HHhh----------------------hhhhhHh---hh-cccccccccccceeeEeHHHHHHHhccccCCch----hh
Q psy7267 247 --NILM----------------------KGFHFIV---WF-TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AF 294 (569)
Q Consensus 247 --~~~~----------------------~~~~~l~---~~-~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~ 294 (569)
.... +...... .. ..........+++.++||++++++ +.+++.+ .+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i--Ggfde~~~~~g~E 304 (625)
T 2z86_A 227 QKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA--GWFDEEFTHWGGE 304 (625)
T ss_dssp STTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH--CCCCTTCSSCCCH
T ss_pred chHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh--CCCccccccCCcc
Confidence 0000 0000000 00 011122235567789999999999 5555554 47
Q ss_pred chHHHHHHHHcCCCEEEEEE
Q psy7267 295 DVELLFIAEVLHIPMAEVSV 314 (569)
Q Consensus 295 D~EL~~Ra~~~G~rI~~vPv 314 (569)
|.|++.|+.++|+++.++|.
T Consensus 305 D~dl~~Rl~~~G~~i~~~p~ 324 (625)
T 2z86_A 305 DNEFGYRLYREGCYFRSVEG 324 (625)
T ss_dssp HHHHHHHHHHTTCEEEECGG
T ss_pred hhhhhhhHHhCCceEEEccc
Confidence 99999999999999999983
No 12
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.86 E-value=7.4e-21 Score=215.13 Aligned_cols=225 Identities=12% Similarity=-0.014 Sum_probs=141.6
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH--HHHHHHHhHhhCCCeEEEEEcCC
Q psy7267 87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT--MQVVHQYTEKCGEDIVRGLKLLK 164 (569)
Q Consensus 87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T--~eil~~~~~~~~~~~V~vi~~~~ 164 (569)
+..|+||||||+||+++.|.+||+|+.+|..... ..+|||||||||+|++ .+..+.+.... ++++++.++
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~-----~~~EIIVVDNgStD~s~~~~~~e~~~~~~--~~I~vI~~~- 248 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQ-----VIGAVIVPDQGERKVRDHPDFPAAAARLG--SRLSIHDQP- 248 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHT-----TEEEEEEEECSSSCGGGSTTHHHHHHHHG--GGEEEEECC-
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccC-----CCCEEEEEECcCCCccchHHHHHHHHhcC--CCEEEEECC-
Confidence 3468899999999999999999999988743211 1569999999999842 33333333333 689999977
Q ss_pred CCChHHHHHHHHHhc----cCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEE--eeeeecccc-
Q psy7267 165 NRGKGGAVTLGTKCA----RGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIV--GSRAHLEAL- 237 (569)
Q Consensus 165 n~Gka~AlN~Gl~~A----~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~--G~r~~~~~~- 237 (569)
|.|.++|+|.|++.| ++|||+++|+|+.++|++|+++++.++.+++.+++|......++.+... |........
T Consensus 249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~ 328 (657)
T 4fix_A 249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFM 328 (657)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccc
Confidence 999999999999998 4589999999999999999999999998643333332110000000000 000000000
Q ss_pred --cchhhHHHHHHhhhhhh----hHhhhcccccccccccceeeEeHHHHHHHhccccCCch--hhchHHHHHHHHcCCCE
Q psy7267 238 --ANVQRSFFRNILMKGFH----FIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW--AFDVELLFIAEVLHIPM 309 (569)
Q Consensus 238 --~~~~~~~~r~~~~~~~~----~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~--~~D~EL~~Ra~~~G~rI 309 (569)
..........+...... ...............+++.++||++++++ +.+++.| .+|+|+++|+.++|+++
T Consensus 329 ~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~v--Ggfd~~F~~~ED~Dl~lR~~~~G~ki 406 (657)
T 4fix_A 329 WTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEEL--GQPLPLFIKWDDADYGLRAAEHGYPT 406 (657)
T ss_dssp EEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHH--CSCCSCSSSSHHHHHHHHHHHTTCCE
T ss_pred ccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHh--CCChhHhccCcHHHHHHHHHHcCCeE
Confidence 00000000000000000 00001111122334556789999999999 5444332 36999999999999999
Q ss_pred EEEEEEEEEecC
Q psy7267 310 AEVSVNWTEIEG 321 (569)
Q Consensus 310 ~~vPv~~~~~~G 321 (569)
.++|-....|.+
T Consensus 407 ~~~p~a~V~H~~ 418 (657)
T 4fix_A 407 VTLPGAAIWHMA 418 (657)
T ss_dssp EEEEEEEEEECC
T ss_pred EEECCEEEEEcC
Confidence 999966555553
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.85 E-value=6.7e-23 Score=234.27 Aligned_cols=194 Identities=14% Similarity=0.169 Sum_probs=0.0
Q ss_pred CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267 89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK 168 (569)
Q Consensus 89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk 168 (569)
+|+||||||+||+++.|.++|+|+++| +|+ ++|||||||||+|+|.++++++.++++ ++++++++++|.|.
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Q------t~~--~~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~i~~~~n~G~ 71 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQ------RTQ--DFNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRFIDLDENSGH 71 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhC------CCC--CeEEEEEECCCCCcHHHHHHHHHHhCC-CCEEEEECCCCCCH
Confidence 467999999999999999999999998 444 789999999999999999999987753 58999998999999
Q ss_pred HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHH
Q psy7267 169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNI 248 (569)
Q Consensus 169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~ 248 (569)
+.|+|.|++.|+||||+++|+|+.++|++|+++++.+++. +++++.......+....... ...
T Consensus 72 ~~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~----------------d~v~~~~~~~~~~~~~~~~~-~~~ 134 (729)
T 3l7i_A 72 AHARNIALEEVETPYFMFLDADDELASYAITFYLEKFNNT----------------DGLIAPIHSFTTQRPQFVDL-DRV 134 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhcCC----------------CEEEEeeEEeecCCCccccc-cce
Confidence 9999999999999999999999999999999999999842 34444332221111000000 000
Q ss_pred hhhhhhhHhhhcccccccccccceeeEeHHHHHHHhcc-ccCCc--hhhchHHHHHHHHcCCCEEEE
Q psy7267 249 LMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSS-IHVQR--WAFDVELLFIAEVLHIPMAEV 312 (569)
Q Consensus 249 ~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~-~~~e~--~~~D~EL~~Ra~~~G~rI~~v 312 (569)
...... ........+....++..++||++++++ + .+++. +.+|.+++.|+...|.++.++
T Consensus 135 ~~~~~~--~~~~~~~~~~~~~~~~~~~rr~~l~~~--gl~fde~~~~~ED~d~~~rl~~~g~~i~~~ 197 (729)
T 3l7i_A 135 RVEYFN--AKENINSFLRKQSACNIIFRTAIVRAH--HIRFNENLNTYVDWSFVLEYMKYVNKFVRI 197 (729)
T ss_dssp -------------------------------------------------------------------
T ss_pred eeeeec--chhhHHHHhhccchhheeeeHHHHHHc--CCCcCCCCCcccCHHHHHHHHHhcCCEEEe
Confidence 000000 000000111122344579999999998 4 34454 567999999999999999888
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.70 E-value=3.6e-17 Score=163.11 Aligned_cols=180 Identities=13% Similarity=0.074 Sum_probs=113.2
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267 88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG 167 (569)
Q Consensus 88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G 167 (569)
.++.+||| |+||+++.|.+||+|+.+++..+. .+|||||||+|+|. .|
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~------~~EiIVVDn~s~d~-------------------------~g 61 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPD------KAEFLAADNREGNQ-------------------------FH 61 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTT------TEEEEEEECTTSCS-------------------------CC
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCC------cEEEEEEECCCCCc-------------------------cc
Confidence 35679975 679999999999998877644321 28999999999872 36
Q ss_pred hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeee-cccccchhhHHHH
Q psy7267 168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAH-LEALANVQRSFFR 246 (569)
Q Consensus 168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~-~~~~~~~~~~~~r 246 (569)
.+.|+|.|+++|+|||++++|+|+.+++++|+++++.++++. ...++.+++ |.... ....+... ...
T Consensus 62 ~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~---------~~~~~vg~v-g~~~~~~~~~g~~~--~~~ 129 (249)
T 2nxv_A 62 GFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALE---------EADPKWLVA-GVAGSPWRPLNHSV--TAQ 129 (249)
T ss_dssp TTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHH---------HHCTTEEEE-ESEEEESSCSCTTS--CCC
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcc---------cCCCCeeEE-eecccccCCCCcee--eec
Confidence 789999999999999999999999999999999999998620 000122222 21111 11000000 000
Q ss_pred HHhhhhhhh--Hhhh-cccccccccccceeeEeHHHHHHHhccccCC---ch-hhchHHHHHHHHcCCCEEEEEEEEE
Q psy7267 247 NILMKGFHF--IVWF-TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RW-AFDVELLFIAEVLHIPMAEVSVNWT 317 (569)
Q Consensus 247 ~~~~~~~~~--l~~~-~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~-~~D~EL~~Ra~~~G~rI~~vPv~~~ 317 (569)
.. ...... .... .....+....+++.++||++ + +.++| +| .+|+|++.|++++|+++.++|....
T Consensus 130 ~~-~~~~~~~~~~~~~~~~~~v~~~~g~~~~~rr~~---~--~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~v~ 201 (249)
T 2nxv_A 130 AL-HISDVFGNDRRRGNVPCRVESLDECFLLMRRLK---P--VLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFHLH 201 (249)
T ss_dssp EE-EEEETTEEEEEESCSSEEEEEECTTEEEEETTB---C--CCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCCCE
T ss_pred cc-ccCCccccccccCCCceEcCeeeeEeeEEEHhh---h--CCCCCCCCCcceehhHHHHHHHHcCCeEEEeccEEE
Confidence 00 000000 0000 00111222345677889988 3 23443 23 3699999999999999999886433
No 15
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.69 E-value=3e-16 Score=165.97 Aligned_cols=233 Identities=15% Similarity=0.106 Sum_probs=146.7
Q ss_pred ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH------HHHHHHHhHhhCCCeEEEEEcC
Q psy7267 90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT------MQVVHQYTEKCGEDIVRGLKLL 163 (569)
Q Consensus 90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T------~eil~~~~~~~~~~~V~vi~~~ 163 (569)
.++|||||+|||+.. .+..+++++ |. .+|||+|||||+|+| .++++++.+..+ ..+.+++..
T Consensus 51 ~~iSVVIP~yNEE~~---lI~~vL~~i-------~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~-~~~~Vl~~~ 118 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLH---LVDGVLKAI-------PH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTH-SKIIMIHQK 118 (394)
T ss_dssp TTEEEEEEESSCCHH---HHHHHHHHS-------CT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHC-CCEEEEETT
T ss_pred CCEEEEEecCcccHH---HHHHHHHcC-------CC-CcEEEEEECcCcccccchhhHHHHHHHHhhccc-cceEEEecC
Confidence 369999999999954 366666542 21 579999999997777 778888766543 455666643
Q ss_pred C----------------------CCChHHHHHHHHHhc---cCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCcccccc
Q psy7267 164 K----------------------NRGKGGAVTLGTKCA---RGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKN 218 (569)
Q Consensus 164 ~----------------------n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~ 218 (569)
. +.||+.|+..|+.+| ++|+|+++|||. ..|..+.++++.+...- .
T Consensus 119 ~p~v~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~-------~- 189 (394)
T 2zu9_A 119 DPGLAKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGF-------L- 189 (394)
T ss_dssp CHHHHHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHH-------H-
T ss_pred CcchhHHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhcc-------c-
Confidence 3 259999999999999 999999999999 67888877777665310 0
Q ss_pred CCCCCceEE-Eeeeeecc--cccc--hhhHHHHHHhhhhhhhHhhhcccccc---cccccceeeEeHHHHHHHhccccCC
Q psy7267 219 NAAGCNGVI-VGSRAHLE--ALAN--VQRSFFRNILMKGFHFIVWFTGVRTI---RDTQCGFKLFTRKSALQLFSSIHVQ 290 (569)
Q Consensus 219 ~~~~g~dvV-~G~r~~~~--~~~~--~~~~~~r~~~~~~~~~l~~~~~~~~i---~d~~~gf~lfrR~al~~I~~~~~~e 290 (569)
-...++++| .+.+.... .+.. ........+..+..+.+.+.+.+... ..+.+|+++|+|++++++ .+. .
T Consensus 190 ~a~~~~dmVR~~~r~~~~~~~~rl~~~~~GRv~rl~~r~Ln~L~~~l~g~~~d~~~tplsGe~A~rr~ll~~L--~~~-~ 266 (394)
T 2zu9_A 190 MSESEYTMVRLHWRHKPKVTKGTLYFKKWGRVSEITNHYLNLLVSEHTAFETTIMVTGNAGEHAMTMKLAEIL--PFS-T 266 (394)
T ss_dssp HCCSSSEEEEEECC-----------------HHHHHHHHHHHHHHHHHSSCCCCCCCTTCSSEEEEHHHHTTC--CEE-S
T ss_pred ccccccceeeeccccccccccccccccCCCceehhHHHHHHHHHHHhcCccccCcCCCCchhhHhhHHHHhcC--CCC-C
Confidence 001346777 55443210 0000 01112222333333333333333221 124458999999999988 443 6
Q ss_pred chhhchHHHHHHHHc----------------CCCEEEEEEEEEEecCCccchhHHHHHHHHHHHHHHHHhcchh
Q psy7267 291 RWAFDVELLFIAEVL----------------HIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGL 348 (569)
Q Consensus 291 ~~~~D~EL~~Ra~~~----------------G~rI~~vPv~~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~ 348 (569)
+|..+.+++..+.+. |.+|.++...+.+- +.-....+..+|....+...+|-.+..
T Consensus 267 gyGvE~~lLv~~~r~~~~~~~~~~~~~~~~~g~~I~qve~~~pH~--H~~~g~~~l~~M~~~~~~~i~~~~l~~ 338 (394)
T 2zu9_A 267 GYSIEPYEIVYILERFGKWENVEEFKDVFDQGIEIFQIETLNPHF--HEDKGKEHVKEMLLLSLATIYHSKLAT 338 (394)
T ss_dssp GGGHHHHHHHHHHHHHSSCCSCGGGHHHHHHCEEEEEEECSSCCC--BCCCCHHHHHHHHHHHHHHHHTSTTCC
T ss_pred CCCCCHHHHHHHHHhhCccccccccccccccCceEEEEeccCCcc--ccccchhHHHHHHHHHHHHHHhhhccC
Confidence 899999999998888 77888776542211 111245566777777777766665543
No 16
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.60 E-value=6.3e-16 Score=158.19 Aligned_cols=149 Identities=15% Similarity=0.173 Sum_probs=103.9
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267 88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG 167 (569)
Q Consensus 88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G 167 (569)
..|+||||||+||+++.|.++|+++...+.. +|+ ++||+||||+ +|+ ..+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q---~~~--~~EIiVVdds-~d~------------------------~f~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQR---QQL--DYGIYVINQA-GDT------------------------IFN 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHH---TTC--EEEEEEEEEC-SSS------------------------CCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHH---hcC--CceEEEEEeC-CCC------------------------ccc
Confidence 4678999999999999999999999953333 333 7999999993 331 126
Q ss_pred hHHHHHHHH----HhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhH
Q psy7267 168 KGGAVTLGT----KCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRS 243 (569)
Q Consensus 168 ka~AlN~Gl----~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~ 243 (569)
++.|+|.|+ +.|+||||+++|+|+.+.+++.. . ..+ ..... .. .. .+ .
T Consensus 113 ~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~--------~----~~~------~~p~~-~~-~~-~~------~- 164 (287)
T 2fy7_A 113 RAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNA--------Y----RCF------SQPRH-IS-VA-MD------K- 164 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSC--------C----SCC------SSCEE-CC-CE-EG------G-
T ss_pred hhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcce--------E----ecC------CCCce-EE-Ee-ec------c-
Confidence 788999999 89999999999999999998510 0 001 00010 00 00 00 0
Q ss_pred HHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcCCCEEE
Q psy7267 244 FFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLHIPMAE 311 (569)
Q Consensus 244 ~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G~rI~~ 311 (569)
+ .+ ........+++.+++|++++++ +.+++.+ .+|.||+.|+.++|+++..
T Consensus 165 ----~---~~--------~~~~~~~~G~~~~~rr~~f~~v--gGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~ 219 (287)
T 2fy7_A 165 ----F---GF--------SLPYVQYFGGVSALSKQQFLTI--NGFPNNYWGWGGEDDDIFNRLVFRGMSISR 219 (287)
T ss_dssp ----G---TT--------SCSSTTCCCSEEEEEHHHHHHT--TSCCSCCSSCSCHHHHHHHHHHHTTCCCBC
T ss_pred ----c---cc--------CCCcCceeeeEEEEEHHHHHHc--CCCCccccccccchHHHHHHHHHcCCeEEe
Confidence 0 00 0112234467889999999999 5555543 2899999999999999883
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.58 E-value=1.8e-14 Score=149.06 Aligned_cols=170 Identities=15% Similarity=0.097 Sum_probs=117.5
Q ss_pred CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH---HHHHHHHhHh-hCCCeEEEEEcCC
Q psy7267 89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT---MQVVHQYTEK-CGEDIVRGLKLLK 164 (569)
Q Consensus 89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T---~eil~~~~~~-~~~~~V~vi~~~~ 164 (569)
.+++|||||+|||+. .+|+++++|+.. ++|||+|||||+|+| .++++++.+. . .++.+++ ++
T Consensus 52 ~~klSIVVPvYNEe~---~lLesVl~qi~~--------d~eIIlVdDGS~D~s~~e~dil~~~~~~~~--~ri~viH-Qk 117 (391)
T 2wvl_A 52 LEQTAIVVPTRNERL---KLLEGVLSGIPH--------EALILVASNSSPDRFQMERDLLEEFAHLTE--RPALIFH-QK 117 (391)
T ss_dssp HTTEEEEEEESSCCH---HHHHHHHHTSCT--------TSEEEEEECCCHHHHHHHHHHHHHHHHHTT--CCEEEEE-TT
T ss_pred HhceEEEEeccCcHH---HHHHHHHhcCCC--------CceEEEEECCCCCChHhHHHHHHHHHhhcc--cceEEEe-cc
Confidence 357999999999996 468888887432 789999999999999 6788898863 4 6888887 55
Q ss_pred CCChHHH-----------------------HHHHHHhc---cCcEEEEEcCCCCCChhhHHHHHHHHHh--ccCCCcccc
Q psy7267 165 NRGKGGA-----------------------VTLGTKCA---RGSIILFADADGATKFADLEKLEDKLKE--LTDGDYIED 216 (569)
Q Consensus 165 n~Gka~A-----------------------lN~Gl~~A---~gd~Vv~lDaD~~~~pd~L~~lv~~~~~--~~~~~~~g~ 216 (569)
|.|.+.| +-.|+..| .++||.|+|||+.++.+..+.+...... ..
T Consensus 118 n~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a------- 190 (391)
T 2wvl_A 118 DPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMA------- 190 (391)
T ss_dssp CHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHC-------
T ss_pred ChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhccc-------
Confidence 5555544 44578887 6999999999999966554443322221 00
Q ss_pred ccCCCCCceEE-Eeeeeecc-----cccchhhHHHHHHhhhhhhhHhhhcccccc---cccccceeeEeHHHHHHH
Q psy7267 217 KNNAAGCNGVI-VGSRAHLE-----ALANVQRSFFRNILMKGFHFIVWFTGVRTI---RDTQCGFKLFTRKSALQL 283 (569)
Q Consensus 217 ~~~~~~g~dvV-~G~r~~~~-----~~~~~~~~~~r~~~~~~~~~l~~~~~~~~i---~d~~~gf~lfrR~al~~I 283 (569)
...+++| ++.|.... ...+..+...+...++.++.+.....+..- .....|=-+++-+..+.+
T Consensus 191 ----~s~~~MVRI~wR~kPK~~~~~~l~f~k~Grvs~itNr~lN~Lis~~~g~et~ii~TgNAGEHAmt~~LA~~l 262 (391)
T 2wvl_A 191 ----KTPFAMVRILWRYKPKLTEDEGVVFRRYGRVSERNNRALNQLIGGVSGFETDVVKTANAGEHAMSLGLALRL 262 (391)
T ss_dssp ----CSSEEEEEEECCCCC------CCHHHHTHHHHHHHHHHHHHHHHHHHSSCCCCCCCSSCSSEEEEHHHHTTS
T ss_pred ----CCCcceEEEecccCcccccCCceeEeecCccchhhHHHHHHHHHHhhCcccceEeccCchhhhhhHHHHHhc
Confidence 1346888 88887542 124455677778888888777766644332 222234467777777666
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.78 E-value=1.3e-08 Score=106.44 Aligned_cols=104 Identities=16% Similarity=0.178 Sum_probs=82.5
Q ss_pred cEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEE---------
Q psy7267 91 NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLK--------- 161 (569)
Q Consensus 91 ~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~--------- 161 (569)
.++|||++||..+ +.++|++++++ +.+..+.+|||.|||+.++|.++++++..+ |..+.
T Consensus 3 ~~pViI~~yNRp~-l~~~L~sL~~~------~p~~~~~~iivsdDgs~~~~~~vi~~~~~~-----I~~~~~~d~~~~~~ 70 (343)
T 1fo8_A 3 VIPILVIACDRST-VRRCLDKLLHY------RPSAELFPIIVSQDCGHEETAQVIASYGSA-----VTHIRQPDLSNIAV 70 (343)
T ss_dssp CCCEEEEESSCTT-HHHHHHHHHHH------CSCTTTSCEEEEECTTCHHHHHHHHTTGGG-----SEEEECSCCCCCCC
T ss_pred cccEEEEECCcHH-HHHHHHHHHhc------CCCcCCcEEEEEECCCCHHHHHHHHHcCCc-----eEEEEcCCcccccc
Confidence 4789999999998 99999999987 333446799999999999999999887432 22222
Q ss_pred cCCCCChH----------HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHH
Q psy7267 162 LLKNRGKG----------GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLK 206 (569)
Q Consensus 162 ~~~n~Gka----------~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~ 206 (569)
.++|.|.. .|+|.+++.+++|+++++|.|+.+.|++++-+.+.++
T Consensus 71 ~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~ 125 (343)
T 1fo8_A 71 QPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYP 125 (343)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHH
T ss_pred chhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHH
Confidence 24565643 6788888888999999999999999999977666664
No 19
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=97.93 E-value=2.3e-05 Score=74.94 Aligned_cols=107 Identities=11% Similarity=-0.020 Sum_probs=72.9
Q ss_pred hccCcEEEEEcCC---CCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhhh
Q psy7267 178 CARGSIILFADAD---GATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFH 254 (569)
Q Consensus 178 ~A~gd~Vv~lDaD---~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~~ 254 (569)
..+.|+++++||| ...+|+.+.++++ .++|+|+|++....... .+....
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl~------------------~g~DVV~GsYp~K~~~~----------~s~~a~ 102 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKFN------------------EGYDVVCGYYYLKTLRG----------YSVYRK 102 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHHH------------------HTCSEEEEECBCTTSSS----------BSEESS
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHHh------------------CCCCEEEEEeeccCCCc----------cchHHH
Confidence 3567999999999 9999999999982 25699999997542111 111111
Q ss_pred hHhhhcccccccccccceeeEeHHHHHHHhcccc--------CCchhhchHHHHHHHHcCCCEEEE
Q psy7267 255 FIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIH--------VQRWAFDVELLFIAEVLHIPMAEV 312 (569)
Q Consensus 255 ~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~--------~e~~~~D~EL~~Ra~~~G~rI~~v 312 (569)
.+.....+.++.+.++||++++|++++++...++ ....++|+.++..+..+|+.+.-.
T Consensus 103 ~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~ 168 (203)
T 2c0n_A 103 DWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSL 168 (203)
T ss_dssp SBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEecccccccccccc
Confidence 2222334457889999999999999999822211 124457888998887777665433
No 20
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.57 E-value=0.0005 Score=69.30 Aligned_cols=149 Identities=15% Similarity=0.144 Sum_probs=102.7
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCC
Q psy7267 87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNR 166 (569)
Q Consensus 87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~ 166 (569)
.+.-+|+||||.+|.++.|...|.-+...+..|.. .+.|+||+.. | ....
T Consensus 48 ~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l-----~y~I~VieQ~--~-----------------------~~~F 97 (287)
T 3lw6_A 48 ASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV-----AHHIFVLNQV--D-----------------------RFRF 97 (287)
T ss_dssp CCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC-----EEEEEEEEEC--S-----------------------SSCC
T ss_pred CCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC-----ceEEEEEecC--C-----------------------CCcc
Confidence 34567999999999999999999999999988766 7889998763 2 1245
Q ss_pred ChHHHHHHHHHhcc--CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEe---eeeecccccchh
Q psy7267 167 GKGGAVTLGTKCAR--GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVG---SRAHLEALANVQ 241 (569)
Q Consensus 167 Gka~AlN~Gl~~A~--gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G---~r~~~~~~~~~~ 241 (569)
.+|..+|.|+..|. .|+++|=|.|..+..|.. ...+. ...+.....
T Consensus 98 NRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n--------------------------~Y~c~~~~~P~Hls~~~--- 148 (287)
T 3lw6_A 98 NRASLINVGFQFASDVYDYIAMHDVDLLPLNDNL--------------------------LYEYPSSLGPLHIAGPK--- 148 (287)
T ss_dssp CHHHHHHHHHHHSCTTCCEEEEECTTEEECCTTS--------------------------CCCCCCTTCCEESSCTT---
T ss_pred chhheecccHHHHhccCCEEEEecccccccCCCc--------------------------cccCCCCCCceEEeecc---
Confidence 68889999999985 599999999986542210 00010 011111000
Q ss_pred hHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC---ch-hhchHHHHHHHHcCCCEEEEE
Q psy7267 242 RSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RW-AFDVELLFIAEVLHIPMAEVS 313 (569)
Q Consensus 242 ~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~-~~D~EL~~Ra~~~G~rI~~vP 313 (569)
..........-+|..+++|+.+.++ +.+++ +| .+|.|+..|+..+|+++...+
T Consensus 149 -----------------~~~~~~Y~~~~GGv~a~~re~f~kV--NGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~ 205 (287)
T 3lw6_A 149 -----------------LHPKYHYDNFVGGILLVRREHFKQM--NGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQ 205 (287)
T ss_dssp -----------------TCSSCCCTTCCCSEEEEEHHHHHHT--TSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCS
T ss_pred -----------------ccCCCCcCCccccEEeccHHHHHHc--CCCCCcCcCCCccchHHHHHHHHcCCcEEcCC
Confidence 0000122233457789999999999 44443 33 369999999999999988764
No 21
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=96.12 E-value=0.042 Score=54.61 Aligned_cols=102 Identities=21% Similarity=0.275 Sum_probs=58.3
Q ss_pred cEEEEEeecCCCCChH----------HHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEE
Q psy7267 91 NLSVIVPAYNEQDRLK----------PMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGL 160 (569)
Q Consensus 91 ~VSVIIP~yNE~~~I~----------~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi 160 (569)
++.+|||+......++ -.|..+++.+.... --+|+|+-| ++. ++++..++ +++++
T Consensus 9 ~~~aIIlA~G~stRl~~K~L~~i~GkPli~~~l~~l~~~~------i~~VvVvt~--~~~----i~~~~~~~---g~~v~ 73 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIKSG------AEEVVIATD--DKR----IRQVAEDF---GAVVC 73 (256)
T ss_dssp CCEEEEECCCC---CTTGGGCEETTEEHHHHHHHHHHHTT------CSEEEEEES--CHH----HHHHHHHT---TCEEE
T ss_pred CceEEEEcCCCCCCCCCCCeeeECCchHHHHHHHHHHhCC------CCEEEEECC--HHH----HHHHHHHc---CCeEE
Confidence 4566666655554432 13444444433311 237777754 232 33333333 34444
Q ss_pred Ec--CCCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHHHHHHHhc
Q psy7267 161 KL--LKNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKLEDKLKEL 208 (569)
Q Consensus 161 ~~--~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~ 208 (569)
.. +...|.+. +..|++.. ..|+++++++|. .++++.+.++++.+.+.
T Consensus 74 ~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~ 126 (256)
T 3tqd_A 74 MTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEH 126 (256)
T ss_dssp ECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHC
T ss_pred EeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhC
Confidence 32 23456554 56677765 579999999999 56899999999999763
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=95.60 E-value=0.061 Score=53.67 Aligned_cols=103 Identities=20% Similarity=0.242 Sum_probs=63.3
Q ss_pred CccEEEEEeecCCCCChH----------HHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEE
Q psy7267 89 SVNLSVIVPAYNEQDRLK----------PMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVR 158 (569)
Q Consensus 89 ~p~VSVIIP~yNE~~~I~----------~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~ 158 (569)
.+++.+|||+-.....++ ..|..+++.+.... --+|+|+-| .+. ++++..++ ++.
T Consensus 16 ~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~~------i~~IvV~t~--~~~----i~~~~~~~---g~~ 80 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG------AERIIVATD--HED----VARAVEAA---GGE 80 (264)
T ss_dssp --CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHTT------CSEEEEEES--CHH----HHHHHHHT---TCE
T ss_pred CCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhCC------CCEEEEECC--HHH----HHHHHHHc---CCE
Confidence 356788888888877776 24455555544321 237877764 232 33333333 344
Q ss_pred EEE--cCCCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267 159 GLK--LLKNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKLEDKLKE 207 (569)
Q Consensus 159 vi~--~~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~ 207 (569)
++. .....|.+. +..+++.. ..|+++++++|. .++++.+.++++.+.+
T Consensus 81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~ 134 (264)
T 3k8d_A 81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQ 134 (264)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHT
T ss_pred EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhh
Confidence 443 233456554 55555554 579999999998 4689999999999876
No 23
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=94.36 E-value=0.33 Score=51.23 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=50.2
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-CcEEEEEcCCC-CCChhhHHHHHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-GSIILFADADG-ATKFADLEKLEDKLK 206 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-gd~Vv~lDaD~-~~~pd~L~~lv~~~~ 206 (569)
+|+|+-+... +.++++..+ .+++++..+...|-+.++..|++... .|.++++++|. .+.++.++++++.+.
T Consensus 53 ~i~vv~~~~~----~~i~~~~~~---~~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~ 125 (459)
T 4fce_A 53 HVHLVYGHGG----ELLKKTLAD---PSLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKP 125 (459)
T ss_dssp CEEEEESSCH----HHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred cEEEEeCCCH----HHHHHHhcc---CCcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHh
Confidence 6777764332 233333222 35667766777899999999999886 48999999998 578899999988765
Q ss_pred h
Q psy7267 207 E 207 (569)
Q Consensus 207 ~ 207 (569)
+
T Consensus 126 ~ 126 (459)
T 4fce_A 126 E 126 (459)
T ss_dssp T
T ss_pred h
Confidence 4
No 24
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=94.06 E-value=0.75 Score=44.93 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=44.2
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEE--cCCCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLK--LLKNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKLE 202 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~--~~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~lv 202 (569)
+|+|+-| .+ .++++..++ +++++. .+...|.+. ...+++.. ..|.++++++|. .++++.+.+++
T Consensus 44 ~ivVv~~--~~----~i~~~~~~~---g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~ 113 (252)
T 3oam_A 44 RVIIATD--DE----RVEQAVQAF---GGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVA 113 (252)
T ss_dssp EEEEEES--CH----HHHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHH
T ss_pred eEEEECC--HH----HHHHHHHHc---CCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHH
Confidence 7777764 23 233333333 344443 234466666 34455554 579999999999 57899999999
Q ss_pred HHHHh
Q psy7267 203 DKLKE 207 (569)
Q Consensus 203 ~~~~~ 207 (569)
+.+.+
T Consensus 114 ~~~~~ 118 (252)
T 3oam_A 114 DNLAA 118 (252)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99876
No 25
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=93.65 E-value=1.2 Score=42.54 Aligned_cols=70 Identities=14% Similarity=0.122 Sum_probs=46.7
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC-----CCChHHHHHHHHHhc-cCcEEEEEcCCCC-CChhhHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK-----NRGKGGAVTLGTKCA-RGSIILFADADGA-TKFADLEKL 201 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~-----n~Gka~AlN~Gl~~A-~gd~Vv~lDaD~~-~~pd~L~~l 201 (569)
+|+|+-| .|. ++++..++ ++.++..++ ..+-..++..|++.. ..|+++++++|.. ++++.+.++
T Consensus 46 ~ivv~~~--~~~----i~~~~~~~---g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l 116 (229)
T 1qwj_A 46 SVWVSTD--HDE----IENVAKQF---GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKV 116 (229)
T ss_dssp EEEEEES--CHH----HHHHHHHT---TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHH
T ss_pred EEEEECC--hHH----HHHHHHHc---CCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHH
Confidence 7777764 232 23333332 345555432 234456778888877 5799999999985 588999999
Q ss_pred HHHHHh
Q psy7267 202 EDKLKE 207 (569)
Q Consensus 202 v~~~~~ 207 (569)
++.+.+
T Consensus 117 ~~~~~~ 122 (229)
T 1qwj_A 117 AEMIRE 122 (229)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 998876
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=93.65 E-value=0.79 Score=45.18 Aligned_cols=71 Identities=11% Similarity=0.095 Sum_probs=45.4
Q ss_pred eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEc-C-CCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHH
Q psy7267 128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKL-L-KNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKL 201 (569)
Q Consensus 128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~-~-~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~l 201 (569)
-+|+|+-|. + .++++..++ ++.++.. + ...|. .++..|++.. ..|+++++++|. .++++.+.++
T Consensus 43 ~~vvVvt~~--~----~i~~~~~~~---g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~l 112 (253)
T 4fcu_A 43 DDLCVATDD--E----RIAEICRAE---GVDVVLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQV 112 (253)
T ss_dssp CEEEEEESC--H----HHHHHHHTT---TCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHH
T ss_pred CEEEEECCH--H----HHHHHHHHc---CCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHH
Confidence 378887652 2 233333333 3344432 2 23343 3566677765 359999999999 5689999999
Q ss_pred HHHHHhc
Q psy7267 202 EDKLKEL 208 (569)
Q Consensus 202 v~~~~~~ 208 (569)
++.+.+.
T Consensus 113 i~~~~~~ 119 (253)
T 4fcu_A 113 AKLLVDK 119 (253)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999774
No 27
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=92.82 E-value=1.5 Score=47.21 Aligned_cols=193 Identities=15% Similarity=0.150 Sum_probs=106.2
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL 174 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~ 174 (569)
++|+.|.. .|...|+.+.+. . .-||+||-..-.|.-.+.+.++...++ .+++++..++..|-|.|+..
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~----g------~~~i~vv~~~~~~~i~~~~~~~~~~~~-~~i~~~~q~~~lGTa~Av~~ 101 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKL----A------PQRLIVVLGHDHQRIAPLVGELADTLG-RTIDVALQDRPLGTGHAVLC 101 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHH----C------CSEEEEEECTTHHHHHHHHHHHHHHHT-SCCEEEECSSCCCHHHHHHH
T ss_pred HeEECChh-HHHHHHHHHHhC----C------CCEEEEEeCCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCCcHHHHHH
Confidence 67888864 556666655553 1 337888776444444455554444443 56888887888999999999
Q ss_pred HHHhccC---cEEEEEcCCC-CCChhhHHHHHHHHHhccCC-CccccccCCCCCceEEEeeeeecccccchhhHHHHHHh
Q psy7267 175 GTKCARG---SIILFADADG-ATKFADLEKLEDKLKELTDG-DYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNIL 249 (569)
Q Consensus 175 Gl~~A~g---d~Vv~lDaD~-~~~pd~L~~lv~~~~~~~~~-~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~ 249 (569)
++..... +.++++.+|. ....+.+.+|++........ .+.......+.+++.+.-.....- .......-.
T Consensus 102 a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~g~v-~~ivEk~~~---- 176 (501)
T 3st8_A 102 GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEV-MAIVEQTDA---- 176 (501)
T ss_dssp HHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTTCCE-EEEECGGGC----
T ss_pred HHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccceeE-EeeccccCC----
Confidence 9988754 3566666666 56788899999887764211 111111222233333321100000 000000000
Q ss_pred hhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccC---CchhhchHHHHHHHHcCCCEEEEE
Q psy7267 250 MKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHV---QRWAFDVELLFIAEVLHIPMAEVS 313 (569)
Q Consensus 250 ~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~---e~~~~D~EL~~Ra~~~G~rI~~vP 313 (569)
.-....+....+|..+|..+.+++++..... ..-.+-++....+...|..+....
T Consensus 177 ---------~~~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~~v~~~~ 234 (501)
T 3st8_A 177 ---------TPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASH 234 (501)
T ss_dssp ---------CHHHHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTCCEEEEE
T ss_pred ---------ChhhccceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCceEEEEe
Confidence 0000112234467889999999988544332 222235566666778888776554
No 28
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=91.66 E-value=3.2 Score=43.51 Aligned_cols=72 Identities=17% Similarity=0.142 Sum_probs=50.6
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-CcEEEEEcCCCC-CChhhHHHHHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-GSIILFADADGA-TKFADLEKLEDKLK 206 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-gd~Vv~lDaD~~-~~pd~L~~lv~~~~ 206 (569)
+|+|+-+... +.++++..+ .+++++..+...|.+.++..|++... .|+++++++|.. +.++.++++++.+.
T Consensus 50 ~iivv~~~~~----~~i~~~~~~---~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 122 (456)
T 2v0h_A 50 NIHLIYGHGG----DLMRTHLAN---EQVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKP 122 (456)
T ss_dssp CEEEEECTTH----HHHHHHTTT---CCCEEEECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred cEEEEeCCCH----HHHHHHhhc---CCcEEEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHh
Confidence 6666654321 233333222 24666666667899999999998875 799999999994 68888999887764
Q ss_pred h
Q psy7267 207 E 207 (569)
Q Consensus 207 ~ 207 (569)
+
T Consensus 123 ~ 123 (456)
T 2v0h_A 123 E 123 (456)
T ss_dssp T
T ss_pred c
Confidence 4
No 29
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=91.56 E-value=0.81 Score=45.34 Aligned_cols=101 Identities=20% Similarity=0.280 Sum_probs=64.2
Q ss_pred CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC--CccHHHHHHHHhHhhCCCeEEEEEcCC--
Q psy7267 89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS--TDKTMQVVHQYTEKCGEDIVRGLKLLK-- 164 (569)
Q Consensus 89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS--tD~T~eil~~~~~~~~~~~V~vi~~~~-- 164 (569)
.|.|-||-|+|.......+ |-.+...+.. =| ++.-|||+|+. ++.+.+++++..-. .+.+..+.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~----Vp--~L~WIVVEd~~~~t~~va~lL~~sgl~-----y~HL~~~~p~ 69 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAE-LTRMANTLLH----VP--NLHWLVVEDAPRRTPLTARLLRDTGLN-----YTHLHVETPR 69 (253)
T ss_dssp CCEEEEEEEECCSTTHHHH-HHHHHHHHTT----SS--SEEEEEEESSSSCCHHHHHHHHHHCCE-----EEEEECCCCH
T ss_pred CCEEEEEeCCCCccchhHH-HHHHhhhhcc----CC--ceEEEEEeCCCCCCHHHHHHHHHcCCc-----eEEeecCCCc
Confidence 4679999999998765544 3344443332 13 78999999965 67788888774321 12222121
Q ss_pred C------------CChHHHHHHHHHhcc---------CcEEEEEcCCCCCChhhHHHH
Q psy7267 165 N------------RGKGGAVTLGTKCAR---------GSIILFADADGATKFADLEKL 201 (569)
Q Consensus 165 n------------~Gka~AlN~Gl~~A~---------gd~Vv~lDaD~~~~pd~L~~l 201 (569)
+ ..-...+|.|+++.+ .-+|.|.|.|...+.+.++++
T Consensus 70 ~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em 127 (253)
T 1v84_A 70 NYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 127 (253)
T ss_dssp HHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence 1 112457999998764 247889999998886665553
No 30
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=90.91 E-value=1.1 Score=42.68 Aligned_cols=70 Identities=13% Similarity=0.071 Sum_probs=45.2
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-----CCCChHHHHHHHHHhcc--CcEEEEEcCCCC-CChhhHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-----KNRGKGGAVTLGTKCAR--GSIILFADADGA-TKFADLEK 200 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-----~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~~-~~pd~L~~ 200 (569)
+|+|+-+. +.. +++.+++ ++.++..+ ...|...++..|++... .|.++++++|.. ++++.+.+
T Consensus 47 ~ivvv~~~--~~i----~~~~~~~---~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~ 117 (228)
T 1ezi_A 47 RIIVSTDG--GLI----AEEAKNF---GVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIRE 117 (228)
T ss_dssp EEEEEESC--HHH----HHHHHHT---TCEEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHH
T ss_pred EEEEECCC--HHH----HHHHHHc---CCEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHH
Confidence 78887652 222 2232333 24444433 23456778888888763 589999999985 58889999
Q ss_pred HHHHHHh
Q psy7267 201 LEDKLKE 207 (569)
Q Consensus 201 lv~~~~~ 207 (569)
+++.+.+
T Consensus 118 l~~~~~~ 124 (228)
T 1ezi_A 118 AFSLFDE 124 (228)
T ss_dssp HHTTCCT
T ss_pred HHHHHHh
Confidence 9887654
No 31
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=90.87 E-value=3.9 Score=39.00 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=45.7
Q ss_pred eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC--CCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHH
Q psy7267 128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL--KNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDK 204 (569)
Q Consensus 128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~--~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~ 204 (569)
-+|+||-+. +. ++++..++ ++.++..+ ...|.+.+. .|++....|.++++++|.. ++++.+.++++.
T Consensus 44 ~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~ 113 (245)
T 1h7e_A 44 AEVWVATDD--PR----VEQAVQAF---GGKAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQG 113 (245)
T ss_dssp CEEEEEESC--HH----HHHHHHHT---TCEEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHH
T ss_pred CeEEEECCc--HH----HHHHHHHc---CCeEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHH
Confidence 378887652 32 23333332 35666643 234555544 5566667799999999986 588999999998
Q ss_pred HHh
Q psy7267 205 LKE 207 (569)
Q Consensus 205 ~~~ 207 (569)
+.+
T Consensus 114 ~~~ 116 (245)
T 1h7e_A 114 MRD 116 (245)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 32
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=90.48 E-value=1.1 Score=45.00 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=62.2
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC--CccHHHHHHHHhHhhCCCeEEEEEcC-
Q psy7267 87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS--TDKTMQVVHQYTEKCGEDIVRGLKLL- 163 (569)
Q Consensus 87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS--tD~T~eil~~~~~~~~~~~V~vi~~~- 163 (569)
...|.|-||-|+|.......+ |-.+...+.. =| ++--|||+|+. ++.+.+++++..-. .+.+..+
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~-LtRLa~TL~~----Vp--~L~WIVVEd~~~~t~~va~lL~rsGl~-----y~HL~~~~ 85 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAE-LVRLSQTLSL----VP--RLHWLLVEDAEGPTPLVSGLLAASGLL-----FTHLVVLT 85 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHH-HHHHHHHHTT----SS--SEEEEEEESSSSCCHHHHHHHHHHCSE-----EEEEECCC
T ss_pred CCCCeEEEEeCCCCCcchhHH-HHHHHHHHhc----CC--ceEEEEEcCCCCCCHHHHHHHHHcCCc-----eEEeccCC
Confidence 356789999999998765444 3334333332 13 78899999964 67778888774322 2222222
Q ss_pred -CCC------------ChHHHHHHHHHhcc-----------------CcEEEEEcCCCCCChhhHHH
Q psy7267 164 -KNR------------GKGGAVTLGTKCAR-----------------GSIILFADADGATKFADLEK 200 (569)
Q Consensus 164 -~n~------------Gka~AlN~Gl~~A~-----------------gd~Vv~lDaD~~~~pd~L~~ 200 (569)
.+. .-...+|.|++..+ .-+|.|.|.|...+.+.+++
T Consensus 86 p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFde 152 (281)
T 3cu0_A 86 PKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEE 152 (281)
T ss_dssp C-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHH
T ss_pred CccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHH
Confidence 111 12467999998766 13678999999888555544
No 33
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=89.90 E-value=1.4 Score=43.38 Aligned_cols=100 Identities=14% Similarity=0.207 Sum_probs=61.1
Q ss_pred CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC--ccHHHHHHHHhHhhCCCeEEEEEcC--C
Q psy7267 89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST--DKTMQVVHQYTEKCGEDIVRGLKLL--K 164 (569)
Q Consensus 89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt--D~T~eil~~~~~~~~~~~V~vi~~~--~ 164 (569)
.|.|-||-|+|.......+ |..+...+... | ++.-|||+|+.. +.+.+++++..- + .+.+..+ .
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~V----p--~l~WIVVEd~~~~~~~v~~lL~~sgl----~-y~HL~~~~~~ 69 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAE-LTRLANTFRQV----A--QLHWILVEDAAARSELVSRFLARAGL----P-STHLHVPTPR 69 (246)
T ss_dssp CCCEEEEEEECCSTTHHHH-HHHHHHHHTTS----T--TEEEEEEESSSSCCHHHHHHHHHSCS----C-EEEEECCCCC
T ss_pred CCEEEEEeCCCCccchhHH-HHHHHHHHhcC----C--ceEEEEEcCCCCCCHHHHHHHHHcCC----c-eEEEecCCcc
Confidence 4668999999998765444 34444444322 3 578899999763 335666665321 1 2222212 1
Q ss_pred CC------ChHHHHHHHHHhcc---------CcEEEEEcCCCCCChhhHHH
Q psy7267 165 NR------GKGGAVTLGTKCAR---------GSIILFADADGATKFADLEK 200 (569)
Q Consensus 165 n~------Gka~AlN~Gl~~A~---------gd~Vv~lDaD~~~~pd~L~~ 200 (569)
|. .-...+|.|+++.+ .-+|.|.|.|...+.+.+++
T Consensus 70 ~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~e 120 (246)
T 2d0j_A 70 RYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQE 120 (246)
T ss_dssp C----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHH
T ss_pred ccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHH
Confidence 11 12478999997753 25789999999888665555
No 34
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=89.84 E-value=1.5 Score=40.31 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=47.1
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHHHHHhc--cCcEEEEEcCCCC-CChhhHHHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTLGTKCA--RGSIILFADADGA-TKFADLEKLEDK 204 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~Gl~~A--~gd~Vv~lDaD~~-~~pd~L~~lv~~ 204 (569)
+|+||-+... +.++++... .++.++..+ ...|.+.++..|++.. ..|+++++++|.. ++++.+.++++.
T Consensus 48 ~i~vv~~~~~----~~~~~~~~~---~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 48 QLIVTLGGAA----DEVLEKVEL---DGLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp EEEEEECTTH----HHHHHHSCC---TTSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cEEEEeCCCH----HHHHHHhcc---CCCEEEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 7777765322 223333222 234555533 3357788899999987 5699999999996 588999999987
No 35
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=89.10 E-value=7 Score=37.59 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=48.9
Q ss_pred EEEEEeCCCCc-cHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-------CcEEEEEcCCC-CCChhhHH
Q psy7267 129 EIIVVSDGSTD-KTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-------GSIILFADADG-ATKFADLE 199 (569)
Q Consensus 129 EIIVVDDgStD-~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-------gd~Vv~lDaD~-~~~pd~L~ 199 (569)
+|+||-+.... ...+.++++. ....+.++.. ..+...++..|++... .|+|+++|+|. .++++.+.
T Consensus 50 ~ivvv~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~ 124 (246)
T 3f1c_A 50 KILISSPKEWMNHAEDNIKKYI---SDDRIVVIEG--GEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIE 124 (246)
T ss_dssp EEEEEECGGGHHHHHHHHHHHC---CCTTEEEEEC--CSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHH
T ss_pred EEEEEeCHHHHHHHHHHHHHhC---CCCCEEEECC--CCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHH
Confidence 67777653221 1233333331 1135666652 3466777888887753 58999999997 57899999
Q ss_pred HHHHHHHhc
Q psy7267 200 KLEDKLKEL 208 (569)
Q Consensus 200 ~lv~~~~~~ 208 (569)
++++.+.+.
T Consensus 125 ~li~~~~~~ 133 (246)
T 3f1c_A 125 ENIDAALET 133 (246)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999998873
No 36
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=88.68 E-value=1.3 Score=40.59 Aligned_cols=69 Identities=17% Similarity=0.191 Sum_probs=46.1
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHHHHHhc--cCcEEEEEcCCC-CCChhhHHHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTLGTKCA--RGSIILFADADG-ATKFADLEKLEDK 204 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~Gl~~A--~gd~Vv~lDaD~-~~~pd~L~~lv~~ 204 (569)
+|+||-+... +.++++... .+++++..+ ...|.+.++..|++.. ..|.++++++|. .++++.++++++.
T Consensus 48 ~i~vv~~~~~----~~~~~~~~~---~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 48 QLILTLGGAA----SAVRAAMAL---DGTDVVVVEDVERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEEECTTH----HHHHHHSCC---TTSEEEECC----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cEEEEeCCCH----HHHHHHhcc---CCCEEEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 7777754321 223333222 235566543 2358889999999887 468999999999 4688999999987
No 37
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=88.43 E-value=1.7 Score=45.94 Aligned_cols=52 Identities=17% Similarity=0.087 Sum_probs=43.1
Q ss_pred eEEEEEcCCCCChHHHHHHHHHhcc--CcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267 156 IVRGLKLLKNRGKGGAVTLGTKCAR--GSIILFADADGA-TKFADLEKLEDKLKE 207 (569)
Q Consensus 156 ~V~vi~~~~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~~-~~pd~L~~lv~~~~~ 207 (569)
++.++..+...|.+.++..|++... .|.++++++|.. +.++.++++++.+.+
T Consensus 75 ~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 129 (468)
T 1hm9_A 75 QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHIN 129 (468)
T ss_dssp SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CcEEEeCCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 4566666667899999999988875 689999999995 688999999998876
No 38
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=87.48 E-value=6.9 Score=36.85 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=34.8
Q ss_pred CCChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHHHHhc
Q psy7267 165 NRGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDKLKEL 208 (569)
Q Consensus 165 n~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~ 208 (569)
..|.+.++ .|++....|+++++++|. .++++.+.++++.+.+.
T Consensus 71 ~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 114 (234)
T 2y6p_A 71 PSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKG 114 (234)
T ss_dssp CSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHT
T ss_pred ccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhC
Confidence 45666666 477777789999999999 77889999999988763
No 39
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=86.62 E-value=6.6 Score=36.89 Aligned_cols=72 Identities=15% Similarity=0.046 Sum_probs=48.7
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc-------cCcEEEEEcCCCC-CChhhHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA-------RGSIILFADADGA-TKFADLEK 200 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A-------~gd~Vv~lDaD~~-~~pd~L~~ 200 (569)
+|+||-+...+...+ +.++ +...+.++ ....|.+.++..|++.. ..|.++++++|.. ++++.+.+
T Consensus 52 ~ivvv~~~~~~~~~~-~~~~----~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~ 124 (231)
T 1vgw_A 52 LTVVVVSPEDTFADK-VQTA----FPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALAR 124 (231)
T ss_dssp EEEEECCTTCSTHHH-HHHH----CTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHH
T ss_pred eEEEEECccHHHHHH-HHhc----CCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHH
Confidence 777776533333333 3322 11345544 34568888888888876 4699999999984 58899999
Q ss_pred HHHHHHh
Q psy7267 201 LEDKLKE 207 (569)
Q Consensus 201 lv~~~~~ 207 (569)
+++.+.+
T Consensus 125 l~~~~~~ 131 (231)
T 1vgw_A 125 LIEQAGN 131 (231)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9998765
No 40
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=86.31 E-value=4.7 Score=39.37 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=41.5
Q ss_pred eEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 156 IVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 156 ~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
.+.++..+...|-+.|+..|++....|.++++.+|.... ..+.++++.+.+
T Consensus 98 ~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~ 148 (269)
T 4ecm_A 98 SFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVEEFTN 148 (269)
T ss_dssp EEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred eEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence 566666566789999999998887789999999999765 678888888765
No 41
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=85.58 E-value=9 Score=35.89 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=49.6
Q ss_pred eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc--CcEEEEEcCCC-CCChhhHHHHHHH
Q psy7267 128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR--GSIILFADADG-ATKFADLEKLEDK 204 (569)
Q Consensus 128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~-~~~pd~L~~lv~~ 204 (569)
-+|+||-+.. ..++.+.+...+. .++.++. ...|...++..|++... .++++++|+|. .++++.+.++++.
T Consensus 49 ~~ivvv~~~~---~~~~~~~~~~~~~-~~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~ 122 (228)
T 2yc3_A 49 KEIVVVCDPF---FRDIFEEYEESID-VDLSFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKD 122 (228)
T ss_dssp EEEEEECCGG---GHHHHHTTTTTSS-SEEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CeEEEEEChH---HHHHHHHHHHhCC-CcEEEEC--CCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHH
Confidence 3677775422 2233333333321 2455543 34688889999998765 48999999996 5688999999998
Q ss_pred HHhc
Q psy7267 205 LKEL 208 (569)
Q Consensus 205 ~~~~ 208 (569)
+.+.
T Consensus 123 ~~~~ 126 (228)
T 2yc3_A 123 GSAV 126 (228)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8763
No 42
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=85.24 E-value=10 Score=36.65 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=43.0
Q ss_pred eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC--CCCChHHHHHHHHHhc---cCcEEEEEcCCCC-CChhhHHHH
Q psy7267 128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL--KNRGKGGAVTLGTKCA---RGSIILFADADGA-TKFADLEKL 201 (569)
Q Consensus 128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~--~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~~-~~pd~L~~l 201 (569)
-+|+|+-+. +. ++++..++ ++.++..+ ...|.+ .+..+++.. ..|+++++++|.. ++++.+.++
T Consensus 43 ~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l 112 (262)
T 1vic_A 43 SRVIIATDN--EN----VADVAKSF---GAEVCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQV 112 (262)
T ss_dssp SEEEEEESC--HH----HHHHHHHT---TCEEEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHH
T ss_pred ceEEEECCc--HH----HHHHHHhc---CCEEEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHH
Confidence 378877652 32 23333332 35556543 223443 233344333 5699999999984 688999999
Q ss_pred HHHHHhc
Q psy7267 202 EDKLKEL 208 (569)
Q Consensus 202 v~~~~~~ 208 (569)
++.+.+.
T Consensus 113 ~~~~~~~ 119 (262)
T 1vic_A 113 ADNLAKF 119 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988763
No 43
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=84.10 E-value=5 Score=40.17 Aligned_cols=96 Identities=9% Similarity=0.140 Sum_probs=59.8
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHh-hCCCeEEEEEcCCCCChHHHHH
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK-CGEDIVRGLKLLKNRGKGGAVT 173 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~-~~~~~V~vi~~~~n~Gka~AlN 173 (569)
++|+.+....|..+++.+.+. --+|+||-+.. ..+.+++.... ++.+++.++..+...|-+.++.
T Consensus 30 ll~i~gg~pli~~~l~~l~~~-----------~~~i~vv~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~ 95 (308)
T 2qh5_A 30 FLKLFDHKSLFELSFKRNASL-----------VDETLIVCNEK---HYFLALEEIKNEIKNKSVGFLLESLSKNTANAIA 95 (308)
T ss_dssp GCTTBTTBCHHHHHHHHHHTT-----------CSEEEEEEEGG---GHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHcc-----------CCCEEEEEChh---HHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHH
Confidence 445544445566666655443 12666664421 12233333222 2112566666667789999999
Q ss_pred HHHHhcc-CcEEEEEcCCCCC-ChhhHHHHHHH
Q psy7267 174 LGTKCAR-GSIILFADADGAT-KFADLEKLEDK 204 (569)
Q Consensus 174 ~Gl~~A~-gd~Vv~lDaD~~~-~pd~L~~lv~~ 204 (569)
.+..... .++++++.+|... +++.+.++++.
T Consensus 96 ~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 96 LSALMSDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHHHHhCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 9988775 4579999999987 78889998886
No 44
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=84.07 E-value=4.1 Score=38.66 Aligned_cols=73 Identities=15% Similarity=0.179 Sum_probs=49.2
Q ss_pred eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-CcEEEEEcCCCC-CChhhHHHHHHHH
Q psy7267 128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-GSIILFADADGA-TKFADLEKLEDKL 205 (569)
Q Consensus 128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-gd~Vv~lDaD~~-~~pd~L~~lv~~~ 205 (569)
-+|+||-+...+...+ +.+ ++...++++. +..|...++..|++... .|.++++++|.. ++++.+.++++.+
T Consensus 52 ~~ivvv~~~~~~~~~~-~~~----~~~~~v~~~~--~~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~ 124 (236)
T 1i52_A 52 KRVVIAISPGDSRFAQ-LPL----ANHPQITVVD--GGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALS 124 (236)
T ss_dssp EEEEEEECTTCCSGGG-SGG----GGCTTEEEEE--CCSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGG
T ss_pred CeEEEEeCccHHHHHH-HHh----cCCCCEEEEC--CCCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHH
Confidence 3777776544343322 222 2112566554 23588888999999884 799999999985 6888999998876
Q ss_pred Hh
Q psy7267 206 KE 207 (569)
Q Consensus 206 ~~ 207 (569)
.+
T Consensus 125 ~~ 126 (236)
T 1i52_A 125 ET 126 (236)
T ss_dssp GT
T ss_pred Hh
Confidence 55
No 45
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=83.31 E-value=3.7 Score=38.43 Aligned_cols=49 Identities=12% Similarity=0.061 Sum_probs=39.6
Q ss_pred eEEEEEcC-CC-CChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHH
Q psy7267 156 IVRGLKLL-KN-RGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDK 204 (569)
Q Consensus 156 ~V~vi~~~-~n-~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~ 204 (569)
++.++..+ .. .|...++..|++....|+++++++|. .++++.++++++.
T Consensus 65 ~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 65 GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 45556543 23 68899999999999899999999999 5788999998876
No 46
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=82.13 E-value=0.94 Score=45.88 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=67.8
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHH-HHHHHhHhhCCCeEEEEEcCCCC
Q psy7267 88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQ-VVHQYTEKCGEDIVRGLKLLKNR 166 (569)
Q Consensus 88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~e-il~~~~~~~~~~~V~vi~~~~n~ 166 (569)
....+||||-+|+..+ .|..+++...... .--||+||=++..+...+ ....+... + ..|+++..+.|.
T Consensus 26 ~~~~FTvvi~ty~R~~----~L~~lv~~~~~~~-----~v~~IvVvWn~~~~~pp~~~~~~~~~~-~-vpv~v~~~~~ns 94 (293)
T 1omz_A 26 ALDSFTLIMQTYNRTD----LLLRLLNHYQAVP-----SLHKVIVVWNNVGEKGPEELWNSLGPH-P-IPVIFKPQTANK 94 (293)
T ss_dssp CTTCEEEEEEESSCHH----HHHHHHHHHTTST-----TEEEEEEEECCTTCCCTHHHHHHTCCC-S-SCEEEEECSSCC
T ss_pred CCCceEEEEEeecccH----HHHHHHHHHhcCC-----CCCeEEEEeCCCCCCCChhhccccCCC-C-ccEEEEeCCCCc
Confidence 3456999999999643 3444444333221 156999998876433332 23332111 1 358887765552
Q ss_pred ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhcc
Q psy7267 167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELT 209 (569)
Q Consensus 167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~ 209 (569)
-..+=.-....+.|.|+.+|.|..++.+.|+...+..++.+
T Consensus 95 --LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~P 135 (293)
T 1omz_A 95 --MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFP 135 (293)
T ss_dssp --GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTST
T ss_pred --hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCc
Confidence 11111222346789999999999999999999888888764
No 47
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=81.60 E-value=7.6 Score=36.74 Aligned_cols=69 Identities=17% Similarity=0.158 Sum_probs=48.6
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLK 206 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~ 206 (569)
+|+||-+. + +..+++.+.+ ++.++... ...|...++..|++.+ .|++ ++++|.. ++++.+.++++.+.
T Consensus 40 ~vvvv~~~--~---~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~ 109 (208)
T 3ngw_A 40 QTVFVCRD--E---KQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGE 109 (208)
T ss_dssp EEEEECSS--H---HHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHH
T ss_pred CEEEEECC--H---HHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhh
Confidence 78888642 2 2333433322 34555432 3356779999999998 9999 9999985 58999999999887
Q ss_pred h
Q psy7267 207 E 207 (569)
Q Consensus 207 ~ 207 (569)
+
T Consensus 110 ~ 110 (208)
T 3ngw_A 110 K 110 (208)
T ss_dssp H
T ss_pred c
Confidence 5
No 48
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=81.03 E-value=6.3 Score=36.56 Aligned_cols=49 Identities=18% Similarity=0.200 Sum_probs=38.7
Q ss_pred eEEEEEcCC-CCChHHHHHHHHHhccC-cEEEEEcCCC-CCChhhHHHHHHHH
Q psy7267 156 IVRGLKLLK-NRGKGGAVTLGTKCARG-SIILFADADG-ATKFADLEKLEDKL 205 (569)
Q Consensus 156 ~V~vi~~~~-n~Gka~AlN~Gl~~A~g-d~Vv~lDaD~-~~~pd~L~~lv~~~ 205 (569)
++ ++.++. ..|-+.++..|++.... |.++++++|. .++++.+.++++.+
T Consensus 61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 35 555443 36888999999998865 8999999999 46889999998876
No 49
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=80.86 E-value=0.85 Score=42.20 Aligned_cols=74 Identities=12% Similarity=0.060 Sum_probs=46.6
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhC-CCeEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCG-EDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLK 206 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~-~~~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~ 206 (569)
+|+|+-+...+...+.+++ .++ ..++.++. ....|.+.++..|++.. .|.++++++|.. ++++.+.++++.+.
T Consensus 44 ~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~-~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~ 118 (196)
T 3rsb_A 44 NIFIATSPNTPKTKEYINS---AYKDYKNIVVID-TSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFY 118 (196)
T ss_dssp CEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHH
T ss_pred EEEEEeCCChHHHHHHHHh---hccCCCCEEEEE-CCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 7787765444444444433 121 12566665 34566667788888877 899999999984 68999999999987
Q ss_pred h
Q psy7267 207 E 207 (569)
Q Consensus 207 ~ 207 (569)
+
T Consensus 119 ~ 119 (196)
T 3rsb_A 119 C 119 (196)
T ss_dssp H
T ss_pred h
Confidence 5
No 50
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=80.84 E-value=18 Score=33.44 Aligned_cols=87 Identities=14% Similarity=0.043 Sum_probs=55.6
Q ss_pred CCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc-c
Q psy7267 102 QDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA-R 180 (569)
Q Consensus 102 ~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A-~ 180 (569)
...|..+++.+.+. . . --+|+|+-+... .+.++++.. . .++.++.. ..+.+.++..|++.. .
T Consensus 30 ~pli~~~l~~l~~~----~--~---~~~i~vv~~~~~---~~~~~~~~~-~--~~v~~~~~--~~~~~~~i~~al~~~~~ 92 (223)
T 2xwl_A 30 TPLLEHALSGLRAS----G--V---IDRIVIAVPPAL---TDESKLVFG-G--EDSVIVSG--GVDRTESVALALEAAGD 92 (223)
T ss_dssp EEHHHHHHHHHHHH----S--C---CSEEEEEECGGG---HHHHHHHTC-B--TTEEEEEC--CSSHHHHHHHHHTTCTT
T ss_pred eEHHHHHHHHHhcC----C--C---CCeEEEEEcccH---HHHHHHHhc-c--CCeEEEcC--CCCHHHHHHHHHHhcCC
Confidence 34555566655543 1 0 126777755321 222333321 1 35666653 345788899999888 7
Q ss_pred CcEEEEEcCCC-CCChhhHHHHHHHH
Q psy7267 181 GSIILFADADG-ATKFADLEKLEDKL 205 (569)
Q Consensus 181 gd~Vv~lDaD~-~~~pd~L~~lv~~~ 205 (569)
.|+++++++|. .++++.+.++++.+
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 79999999998 46888999999988
No 51
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=80.42 E-value=3.9 Score=43.03 Aligned_cols=102 Identities=16% Similarity=0.074 Sum_probs=60.4
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHh-Hhh----CCCeEEEEEcC---C--
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYT-EKC----GEDIVRGLKLL---K-- 164 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~-~~~----~~~~V~vi~~~---~-- 164 (569)
++|+-+....|..+|+.+.+. . --+|+||-+...+...+.+.+.. ... ....++++... .
T Consensus 45 llpi~g~~pli~~~l~~l~~~----g------~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~ 114 (451)
T 1yp2_A 45 AVPLGANYRLIDIPVSNCLNS----N------ISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENP 114 (451)
T ss_dssp GCEETTTEETTHHHHHHHHHT----T------CCEEEEEESCCCHHHHHHHHHHCC--------CCEEEEEESCSSTTSC
T ss_pred eeEECCcceeHHHHHHHHHHC----C------CCEEEEEeccCHHHHHHHHhhhhhcccccccccCcEEEeccccccccc
Confidence 455555535677777766653 0 23777776644443333333210 000 01235565421 1
Q ss_pred --CCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 165 --NRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 165 --n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
..|-+.|+..++.... .+.++++.+|...+ ..+.++++.+.+
T Consensus 115 ~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~ 161 (451)
T 1yp2_A 115 DWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRE 161 (451)
T ss_dssp CCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHH
Confidence 3688899999888765 58999999999554 458888887765
No 52
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=79.76 E-value=24 Score=33.89 Aligned_cols=90 Identities=14% Similarity=0.141 Sum_probs=55.9
Q ss_pred CCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc
Q psy7267 100 NEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA 179 (569)
Q Consensus 100 NE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A 179 (569)
+....|..+++.+.+. +. --+|+||-+... .+.++++... .+.++.. ..+...++..|++..
T Consensus 33 ~Gkpll~~~l~~~~~~--------~~-~~~ivVv~~~~~---~~~~~~~~~~----~v~~v~g--g~~r~~sv~~gl~~~ 94 (231)
T 3q80_A 33 DGQTLIERAVDGLLDS--------GV-VDTVVVAVPADR---TDEARQILGH----RAMIVAG--GSNRTDTVNLALTVL 94 (231)
T ss_dssp TTEEHHHHHHHHHHHT--------SC-CCEEEEEECGGG---HHHHHHHHGG----GCEEEEC--CSSHHHHHHHHHGGG
T ss_pred CCeEHHHHHHHHHHhC--------CC-CCeEEEECChHH---HHHHHHHhcC----CeEEEcC--CCchHHHHHHHHHHh
Confidence 3444556666655442 10 237877765322 2233333221 3555542 234567888898887
Q ss_pred c----CcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267 180 R----GSIILFADADGA-TKFADLEKLEDKLKE 207 (569)
Q Consensus 180 ~----gd~Vv~lDaD~~-~~pd~L~~lv~~~~~ 207 (569)
. .|+|+++|+|.. ++++.+.++++.+.+
T Consensus 95 ~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 95 SGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp C---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 5 489999999974 689999999999876
No 53
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=78.00 E-value=4.2 Score=40.73 Aligned_cols=99 Identities=17% Similarity=0.055 Sum_probs=62.7
Q ss_pred EEeec-CCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC-ccHHHHHHHHhHhhC-CCeEEEEEcC--------
Q psy7267 95 IVPAY-NEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST-DKTMQVVHQYTEKCG-EDIVRGLKLL-------- 163 (569)
Q Consensus 95 IIP~y-NE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt-D~T~eil~~~~~~~~-~~~V~vi~~~-------- 163 (569)
++|+- +....|..+|+.+.+. . --+|+||-.... +...+.+. ...+ ..++.++..+
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~------~----~~~i~vv~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~ 91 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRA------G----FGRLVFVIRHSFEKEFREKIL---TKYEGRIPVELVFQELDRLPEGF 91 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHH------T----CCEEEEEECGGGHHHHHHHTH---HHHTTTSCEEEEECCTTCCCTTC
T ss_pred EeEcCCCCeeHHHHHHHHHHHC------C----CCeEEEEcCchHHHHHHHHHH---HHhccCCcEEEEecccccccccc
Confidence 45553 3446666677766553 1 237777765331 22222222 2221 1456676655
Q ss_pred -------CCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 164 -------KNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 164 -------~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
+..|-+.|+..+....+. -++++.+|...+++.+.++++...+
T Consensus 92 ~~~~~~~~~~Gt~~al~~a~~~i~~-~~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 92 SCPEGREKPWGTNHAVLMGRDAIRE-PFAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CCCTTCCSCCCHHHHHHTTTTTCCS-CEEEEESSCBCCHHHHHHHHHHHHT
T ss_pred cccccccccCCcHHHHHHHHHhcCC-CEEEEECCeecCHHHHHHHHHHHHH
Confidence 468999999999888854 4566789999999889999998875
No 54
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=77.94 E-value=4.8 Score=39.86 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=44.0
Q ss_pred eEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCCCC--hhhHHHHHHHHHhc
Q psy7267 156 IVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATK--FADLEKLEDKLKEL 208 (569)
Q Consensus 156 ~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~--pd~L~~lv~~~~~~ 208 (569)
++.++..+...|-+.|+..|......+.++++.+|..+. +..+.++++...+.
T Consensus 107 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~ 161 (297)
T 2ux8_A 107 NIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKV 161 (297)
T ss_dssp SEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhc
Confidence 477777667789999999998887778999999999887 68899999987653
No 55
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=77.88 E-value=16 Score=34.14 Aligned_cols=43 Identities=5% Similarity=0.006 Sum_probs=35.4
Q ss_pred CCChHHHHHHHHHhc----c---CcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267 165 NRGKGGAVTLGTKCA----R---GSIILFADADG-ATKFADLEKLEDKLKE 207 (569)
Q Consensus 165 n~Gka~AlN~Gl~~A----~---gd~Vv~lDaD~-~~~pd~L~~lv~~~~~ 207 (569)
..|...++..|++.. . .|+++++++|. .++++.+.++++.+.+
T Consensus 83 ~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~ 133 (236)
T 2vsh_A 83 GADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQN 133 (236)
T ss_dssp CSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHh
Confidence 356778888888876 2 48999999999 6789999999998876
No 56
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=77.63 E-value=3.2 Score=40.72 Aligned_cols=54 Identities=13% Similarity=0.066 Sum_probs=44.6
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCCCChh----hHHHHHHHHHhc
Q psy7267 155 DIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFA----DLEKLEDKLKEL 208 (569)
Q Consensus 155 ~~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd----~L~~lv~~~~~~ 208 (569)
..+.++..+...|-+.|+..|+.....+.++++.+|..++++ .+.++++.+.+.
T Consensus 95 ~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 95 CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHH
T ss_pred ccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHc
Confidence 356667666778999999999988877889999999987887 799999988764
No 57
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=72.42 E-value=9.5 Score=36.25 Aligned_cols=77 Identities=9% Similarity=-0.000 Sum_probs=53.2
Q ss_pred CCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc
Q psy7267 100 NEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA 179 (569)
Q Consensus 100 NE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A 179 (569)
+....|..+++.+.+. ..+|+||-+ .|. ++++ .++++ +...|.+.++..|++..
T Consensus 30 ~g~pll~~~l~~l~~~-----------~~~ivvv~~--~~~----i~~~------~~~~~---~~~~g~~~~i~~a~~~~ 83 (232)
T 2dpw_A 30 RGRPMVEWVLEALYAA-----------GLSPVYVGE--NPG----LVPA------PALTL---PDRGGLLENLEQALEHV 83 (232)
T ss_dssp TTEETHHHHHHHHHHT-----------TCEEEEESC--CSS----CSSC------CSEEE---CCCSSHHHHHHHHHHTC
T ss_pred CCEEHHHHHHHHHHhc-----------CCEEEEEeC--hHH----Hhhh------cCeEe---cCCCCHHHHHHHHHHHc
Confidence 3445677777766553 228888733 232 1111 13444 55678999999999988
Q ss_pred cCcEEEEEcCCCC-CChhhHHHHHH
Q psy7267 180 RGSIILFADADGA-TKFADLEKLED 203 (569)
Q Consensus 180 ~gd~Vv~lDaD~~-~~pd~L~~lv~ 203 (569)
. |.++++++|.. ++++.+.++++
T Consensus 84 ~-~~~lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 84 E-GRVLVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp C-SEEEEEETTCTTCCHHHHHHHHH
T ss_pred C-CCEEEEeCCcccCCHHHHHHHHh
Confidence 7 99999999995 68899999988
No 58
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=70.08 E-value=14 Score=34.33 Aligned_cols=94 Identities=13% Similarity=0.039 Sum_probs=60.2
Q ss_pred ccEEEEEeecCCCCChH--H---------HHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEE
Q psy7267 90 VNLSVIVPAYNEQDRLK--P---------MLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVR 158 (569)
Q Consensus 90 p~VSVIIP~yNE~~~I~--~---------~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~ 158 (569)
+++.+||++-.....+. + .++.+++.+... --+|+||-+...+ +.+. +++
T Consensus 13 ~~~~~iILA~G~g~Rmg~~K~ll~i~g~pll~~~l~~l~~~-------~~~i~vv~~~~~~------~~~~------~~~ 73 (201)
T 2e8b_A 13 KVNTCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKSV-------FKEVYIVAKDREK------FSFL------NAP 73 (201)
T ss_dssp SCCEEEEEEESSCCCCSTTHHHHHHHHHHHHHHHHHHHHTT-------CSEEEEEESCSGG------GGGG------TCC
T ss_pred cCceEEEECCCCCccCCCCcccceECceEHHHHHHHHHHHh-------CCEEEEEeCcHHH------hhcC------Cce
Confidence 34677888877666542 2 233333333321 2377777553322 1111 244
Q ss_pred EEEcC-CCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHH-HH
Q psy7267 159 GLKLL-KNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEK-LE 202 (569)
Q Consensus 159 vi~~~-~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~-lv 202 (569)
++..+ ...|.+.++..|++....|.++++++|.. ++++.+++ ++
T Consensus 74 ~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 74 VVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 56543 45789999999999988899999999986 48888888 77
No 59
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=69.78 E-value=16 Score=36.09 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=42.9
Q ss_pred eEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCCCC----hh---hHHHHHHHHHhc
Q psy7267 156 IVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATK----FA---DLEKLEDKLKEL 208 (569)
Q Consensus 156 ~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~----pd---~L~~lv~~~~~~ 208 (569)
.+.++..+...|-+.|+..|......+.++++.+|..++ ++ .+.++++...+.
T Consensus 103 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~ 162 (302)
T 2e3d_A 103 TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET 162 (302)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH
T ss_pred ceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhc
Confidence 566666667789999999999887668899999998876 45 799999887653
No 60
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=68.83 E-value=11 Score=37.46 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=61.0
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHh---hCCCeEEEEEcCCCCChHHH
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK---CGEDIVRGLKLLKNRGKGGA 171 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~---~~~~~V~vi~~~~n~Gka~A 171 (569)
++|+++. ..|...++.+... . --+|+||-.+.+. +.++++... ++ ..+.++..+...|-+.|
T Consensus 27 llpi~gk-pli~~~l~~l~~~------g----i~~I~vv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 91 (293)
T 1fxo_A 27 LLPVYDK-PMIYYPLSTLMLA------G----IREILIISTPQDT---PRFQQLLGDGSNWG-LDLQYAVQPSPDGLAQA 91 (293)
T ss_dssp GSEETTE-ETTHHHHHHHHHT------T----CCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCGGGH
T ss_pred eCeECCE-eHHHHHHHHHHHC------C----CCEEEEEeccccH---HHHHHHHhcccccC-ceEEEeeCCCCCCHHHH
Confidence 4667775 6677777776553 0 2378777543222 222332222 21 34666665667899999
Q ss_pred HHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 172 VTLGTKCARGSIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 172 lN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
+..|.+....|-++++.+|..+....+.++++.+.+
T Consensus 92 l~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~ 127 (293)
T 1fxo_A 92 FLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQ 127 (293)
T ss_dssp HHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHh
Confidence 999988776565566669987644678888887754
No 61
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=66.75 E-value=10 Score=39.38 Aligned_cols=67 Identities=10% Similarity=0.228 Sum_probs=47.3
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLKE 207 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~ 207 (569)
+|+||-+ . .+.++++. ..+.++. ...|...++..|++....|+++++|+|.. ++++.+.++++.+.+
T Consensus 49 ~IvVvt~-~----~~~i~~~~-----~~v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~ 116 (371)
T 1w55_A 49 KIVVTSS-N----ITYMKKFT-----KNYEFIE--GGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDK 116 (371)
T ss_dssp CEEEEES-C----HHHHHTTC-----SSSEEEE--CCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGG
T ss_pred eEEEEcC-C----HHHHHHHh-----CCCEEEe--CCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 7888766 2 23333321 1245553 24567789999999888899999999984 688999999887765
No 62
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=62.36 E-value=26 Score=34.78 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=59.4
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHh---hCCCeEEEEEcCCCCChHHH
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK---CGEDIVRGLKLLKNRGKGGA 171 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~---~~~~~V~vi~~~~n~Gka~A 171 (569)
++|+++. ..|...++.+... . --+|+||-..... +.++++... ++ .++.++..+...|-+.|
T Consensus 28 llpi~gk-pli~~~l~~l~~~------g----i~~Iivv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 92 (295)
T 1lvw_A 28 LLPIYDK-PMIYYPLSVLMLA------G----IRDILIISTPRDL---PLYRDLLGDGSQFG-VRFSYRVQEEPRGIADA 92 (295)
T ss_dssp GSEETTE-ETTHHHHHHHHHT------T----CCEEEEEECTTTH---HHHHHHHTTSGGGT-SEEEEEECSSCCCGGGH
T ss_pred ecEECCe-eHHHHHHHHHHHC------C----CCeEEEEeccchH---HHHHHHhhhccccC-ceEEEeeCCCCCChHHH
Confidence 5677774 6677777776653 0 2378877542221 223333221 21 34666665666799999
Q ss_pred HHHHHHhccC-cEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 172 VTLGTKCARG-SIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 172 lN~Gl~~A~g-d~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
+..|.+.... +++++. +|..+....+.++++.+.+
T Consensus 93 l~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (295)
T 1lvw_A 93 FIVGKDFIGDSKVALVL-GDNVFYGHRFSEILRRAAS 128 (295)
T ss_dssp HHHTHHHHTTSCEEEEE-TTCCEECTTHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEEEEE-CCccccCcCHHHHHHHHHH
Confidence 9988887654 455555 9987644678888887754
No 63
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=61.54 E-value=19 Score=35.54 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=58.5
Q ss_pred ccEEEEEeec-CCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCC--
Q psy7267 90 VNLSVIVPAY-NEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNR-- 166 (569)
Q Consensus 90 p~VSVIIP~y-NE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~-- 166 (569)
+.+.|++.+= |-...+..++.|++.. -+..++.++|+.|+-+++..+.++++.+.++ ..++++..+...
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~-------~~~~~~~~~il~~~is~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~ 75 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYIN-------NPGRIFDVYLIHSRISEDKLKDLGEDLKKFS-YTLYPIRATDDLFS 75 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHHH-------STTCCEEEEEEESCCCHHHHHHHHHHHHTTT-CEEEEEECC-----
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHHh-------CCCCceEEEEEeCCCCHHHHHHHHHHHHHcC-CEEEEEEeCHHHHh
Confidence 4577775551 2223334444444443 1223688999999988888888888876542 456666644321
Q ss_pred C---------hHHHHHHHHHhc--cCcEEEEEcCCCCCChhhHHHHHH
Q psy7267 167 G---------KGGAVTLGTKCA--RGSIILFADADGATKFADLEKLED 203 (569)
Q Consensus 167 G---------ka~AlN~Gl~~A--~gd~Vv~lDaD~~~~pd~L~~lv~ 203 (569)
+ -..++-..-+.. ..|-|+++|+|..+-. .+.+|.+
T Consensus 76 ~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~-di~~L~~ 122 (276)
T 3tzt_A 76 FAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN-PLDDLLR 122 (276)
T ss_dssp --------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS-CSHHHHT
T ss_pred cCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC-CHHHHhh
Confidence 1 001111111222 3699999999987653 4555554
No 64
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=58.59 E-value=52 Score=31.77 Aligned_cols=50 Identities=10% Similarity=-0.020 Sum_probs=38.9
Q ss_pred EEEEEcCCCCChHHHHHHHHHhc---cCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267 157 VRGLKLLKNRGKGGAVTLGTKCA---RGSIILFADADGA-TKFADLEKLEDKLKE 207 (569)
Q Consensus 157 V~vi~~~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~ 207 (569)
+.+.. ....|.+.+++.|++.+ ..+-++++=+|.- +.++.|.++++.+.+
T Consensus 77 ~~~~~-q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 77 HMFAA-QQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp SEEEE-CCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred cEEec-CCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 44443 45578999999999876 4578999999984 688999999887765
No 65
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=55.89 E-value=16 Score=36.75 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=41.5
Q ss_pred eEEEEEcCCCCChHHHHHHHHHhccC--cEEEEEcCCCCCC-hhhHHHHHHHHHh
Q psy7267 156 IVRGLKLLKNRGKGGAVTLGTKCARG--SIILFADADGATK-FADLEKLEDKLKE 207 (569)
Q Consensus 156 ~V~vi~~~~n~Gka~AlN~Gl~~A~g--d~Vv~lDaD~~~~-pd~L~~lv~~~~~ 207 (569)
.+.++..+...|-+.|+..|+..... |+++++.+|..++ +..+.++++.+.+
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~ 160 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAE 160 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHT
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHh
Confidence 46666666678999999999887643 4589999999886 5889999988765
No 66
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=55.83 E-value=15 Score=34.60 Aligned_cols=69 Identities=13% Similarity=0.165 Sum_probs=43.7
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC-CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN-RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLED 203 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n-~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~ 203 (569)
+|+||- ...+ ++.+.+.++++ .+++++..+.. .|.+.++..|++..+. .++++.+|..++++.++++++
T Consensus 61 ~i~vv~-~~~~---~~~~~~~~~~~-~~~~~v~~~~~~~g~~~~i~~a~~~~~~-~~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 61 EFIIVA-SRYA---DDIDAFLKDKG-FNYKIVRHDRPEKGNGYSLLVAKNHVED-RFILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp EEEEEE-STTH---HHHHHHHTTSC-CCEEEEECSCGGGCHHHHHHTTGGGCCS-SEEEEETTEEECHHHHHHHTT
T ss_pred EEEEEe-CChH---HHHHHHHHhcC-CcEEEEECCCCCCCcHHHHHHHHHHCCC-CEEEEcCCcccCHHHHHHHHh
Confidence 677766 3222 22233223321 35777775443 6889999999988874 456788998777777776654
No 67
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=54.58 E-value=15 Score=36.52 Aligned_cols=97 Identities=12% Similarity=0.112 Sum_probs=58.3
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHh---hCCCeEEEEEcCCCCChHHH
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK---CGEDIVRGLKLLKNRGKGGA 171 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~---~~~~~V~vi~~~~n~Gka~A 171 (569)
++|+++. ..|...++.+... . --+|+||-..... +.++++... ++ .++.++..+...|.+.|
T Consensus 28 llpi~gk-pli~~~l~~l~~~--g--------i~~I~vv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 92 (296)
T 1mc3_A 28 LLPIYDK-PMIYYPLSVLMLA--G--------IREILIITTPEDK---GYFQRLLGDGSEFG-IQLEYAEQPSPDGLAQA 92 (296)
T ss_dssp GSEETTE-ETTHHHHHHHHHT--T--------CCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCSTHH
T ss_pred eeEECCe-eHHHHHHHHHHhC--C--------CCcEEEEechhHH---HHHHHHHhcccccC-ceEEEeccCCCCCHHHH
Confidence 4567764 6677777766543 0 2378877542221 223333221 21 24666665666888999
Q ss_pred HHHHHHhccC-cEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 172 VTLGTKCARG-SIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 172 lN~Gl~~A~g-d~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
+..|.+.... ++++++ +|..+....+.++++.+.+
T Consensus 93 l~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (296)
T 1mc3_A 93 FIIGETFLNGEPSCLVL-GDNIFFGQGFSPKLRHVAA 128 (296)
T ss_dssp HHHTHHHHTTSCEEEEE-TTEEEECSSCHHHHHHHTT
T ss_pred HHHHHHHhCCCCEEEEE-CCccccccCHHHHHHHHHH
Confidence 9888887754 455555 9986544678888887754
No 68
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=53.84 E-value=16 Score=37.88 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=58.8
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhC------CCeEEEEEcCC----
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG------EDIVRGLKLLK---- 164 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~------~~~V~vi~~~~---- 164 (569)
++|.-+....|..+|+.+.+. . --+|+|+-+...+...+.+.+ .++ ...+.++....
T Consensus 37 llpi~gk~pli~~~l~~l~~~----g------i~~i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~v~i~~~~~~~~~ 103 (420)
T 3brk_X 37 AVYFGGKARIIDFALSNALNS----G------IRRIGVATQYKAHSLIRHLQR---GWDFFRPERNESFDILPASQRVSE 103 (420)
T ss_dssp GSEETTTEETHHHHHHHHHHT----T------CCEEEEEECTTCHHHHHHHHH---HSCCCCGGGTCEEEEECCC-----
T ss_pred ccccCCCCcHHHHHHHHHHhC----C------CCeEEEEeCCChHHHHHHHhh---hhccccccccCCEEEeCccccccC
Confidence 345544435666677766553 0 237777766443333333332 121 02355553221
Q ss_pred C---CChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 165 N---RGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 165 n---~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
. .|-+.|+..|++... .|.++++.+|... +..+.++++.+.+
T Consensus 104 ~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~ 151 (420)
T 3brk_X 104 TQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVD 151 (420)
T ss_dssp --CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHH
Confidence 2 688899988887764 4899999999954 4568888888765
No 69
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=53.80 E-value=78 Score=29.82 Aligned_cols=45 Identities=20% Similarity=0.178 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHHHhc-cCcEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267 163 LKNRGKGGAVTLGTKCA-RGSIILFADADGATKFADLEKLEDKLKEL 208 (569)
Q Consensus 163 ~~n~Gka~AlN~Gl~~A-~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~ 208 (569)
+...|-+.|+..|.... ..|.++++.+|.. .+..+.++++...+.
T Consensus 103 ~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~-~~~~~~~~~~~~~~~ 148 (259)
T 1tzf_A 103 GDSSMTGGRLKRVAEYVKDDEAFLFTYGDGV-ADLDIKATIDFHKAH 148 (259)
T ss_dssp CSSCCHHHHHHHTGGGTTTSSCEEEEETTEE-ECCCHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHHhcCCCCcEEEEECCEe-cccCHHHHHHHHHHh
Confidence 44678999999888876 4578888999985 456788888887653
No 70
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=46.42 E-value=78 Score=29.35 Aligned_cols=92 Identities=10% Similarity=0.095 Sum_probs=54.0
Q ss_pred CCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc
Q psy7267 100 NEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA 179 (569)
Q Consensus 100 NE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A 179 (569)
+....|..+++.+.+. .. --+|+||-+... .+.++++.. +. ..+.... ...+...++..|++.+
T Consensus 39 ~Gkpli~~~i~~l~~~------~~---~~~ivVv~~~~~---~~~~~~~~~-~~-~~~~~~~--gg~~~~~sv~~al~~~ 102 (234)
T 1vpa_A 39 EGRMLFEYPLSTFLKS------EA---IDGVVIVTRREW---FEVVEKRVF-HE-KVLGIVE--GGDTRSQSVRSALEFL 102 (234)
T ss_dssp TTEETTHHHHHHHHHC------TT---CSEEEEEECGGG---HHHHHTTCC-CT-TEEEEEE--CCSSHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcC------CC---CCeEEEEEChHH---HHHHHHHhc-cC-CceEEeC--CCCcHHHHHHHHHHHh
Confidence 3445666677766543 00 137777765322 222233221 11 2232221 1223666777788766
Q ss_pred ---cCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267 180 ---RGSIILFADADG-ATKFADLEKLEDKLKE 207 (569)
Q Consensus 180 ---~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~ 207 (569)
..|+++++++|. .++++.+.++++.+.+
T Consensus 103 ~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~ 134 (234)
T 1vpa_A 103 EKFSPSYVLVHDSARPFLRKKHVSEVLRRARE 134 (234)
T ss_dssp GGGCCSEEEEEETTSCCCCHHHHHHHHHHHHH
T ss_pred hhcCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 368999999998 4689999999998765
No 71
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=37.86 E-value=36 Score=33.70 Aligned_cols=107 Identities=15% Similarity=-0.005 Sum_probs=57.9
Q ss_pred ccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhhhhHhh
Q psy7267 179 ARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVW 258 (569)
Q Consensus 179 A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~~~l~~ 258 (569)
...+|++++|.|+.+..+.|.++++.+. +.-++.+|........... . .......
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~d---------------~~~~~YiG~~~~~~~~~~~-~-~~~~~~~-------- 146 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTFP---------------QDRDVYVGKPSLNRPIHAS-E-LQSKQRT-------- 146 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTSC---------------TTSCCEEECEEC-------------------------
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhCC---------------CCCCEEEEEeccCcccccc-c-cCccccc--------
Confidence 4789999999999998777666665443 3346777766421100000 0 0000000
Q ss_pred hcccccccccccceeeEeHHHHHHHhcccc---------CCchhhchHHHHHHH-HcCCCEEE
Q psy7267 259 FTGVRTIRDTQCGFKLFTRKSALQLFSSIH---------VQRWAFDVELLFIAE-VLHIPMAE 311 (569)
Q Consensus 259 ~~~~~~i~d~~~gf~lfrR~al~~I~~~~~---------~e~~~~D~EL~~Ra~-~~G~rI~~ 311 (569)
...... ...+|+..+++|++++++..... ...+..|..|..-+. +.|.+...
T Consensus 147 ~~~~~~-y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~ 208 (280)
T 2j0a_A 147 KLVRFW-FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQP 208 (280)
T ss_dssp ----CC-EECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEE
T ss_pred cccccC-cccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCcee
Confidence 000011 22233446999999999942111 112345999988887 77877543
No 72
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=37.37 E-value=51 Score=33.33 Aligned_cols=96 Identities=15% Similarity=0.110 Sum_probs=53.9
Q ss_pred EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267 95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL 174 (569)
Q Consensus 95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~ 174 (569)
++|..++...|..+++.+.+. + .--+|+||-+.. -.+.+++..... ....++..+...|-+.|+..
T Consensus 27 ll~l~g~~pli~~~l~~l~~~--------~-~~~~iivvt~~~---~~~~i~~~l~~~--~~~~ii~e~~~~gta~ai~~ 92 (336)
T 2x65_A 27 FLKLFGNKSLMRWTFERVLEE--------M-DPKDVIVVTHKD---YVERTKKELPEL--PDENIIAEPMKKNTAPACFI 92 (336)
T ss_dssp GCCCBTTBCHHHHHHHHHHTT--------C-CGGGEEEEEEGG---GHHHHHHHCTTS--CGGGEEEESSCCCHHHHHHH
T ss_pred EEECCCCCcHHHHHHHHHhcc--------C-CCCcEEEEcChH---HHHHHHHHhhcc--ccceEEeCCCCCCcHHHHHH
Confidence 456666555566666655442 0 012566665421 123333322222 11234445667888888888
Q ss_pred HHHhcc-CcEEEEEcCCCCC-ChhhHHHHHHH
Q psy7267 175 GTKCAR-GSIILFADADGAT-KFADLEKLEDK 204 (569)
Q Consensus 175 Gl~~A~-gd~Vv~lDaD~~~-~pd~L~~lv~~ 204 (569)
+..... .++++++.+|..+ +++.+..+++.
T Consensus 93 a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~ 124 (336)
T 2x65_A 93 GTKLADDDEPVLVLPADHRIPDTKKFWKTVKK 124 (336)
T ss_dssp HHTTSCTTCEEEEEETTCBCCCHHHHHHHHHH
T ss_pred HHHhhCCCCEEEEEcCCceeccHHHHHHHHHH
Confidence 776543 4789999999876 45565555444
No 73
>1dp7_P MHC class II transcription factor HRFX1; winged helix, protein- DNA conovel mode of DNA recognition, transcription/DNA complex; HET: DNA BRU; 1.50A {Synthetic} SCOP: a.4.5.20
Probab=33.94 E-value=5.9 Score=31.94 Aligned_cols=38 Identities=29% Similarity=0.538 Sum_probs=32.4
Q ss_pred eecceeeccccceeeccccccCCCcceeeeeecccCcce
Q psy7267 427 HCSSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSL 465 (569)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (569)
+|...--.|+|+.+||+.+-+.-|++.| -..|..|+|-
T Consensus 29 ~C~~~~~~pl~~a~FGK~ir~~FP~l~t-rRLg~rG~sk 66 (76)
T 1dp7_P 29 HSQEQKLEPVNAASFGKLIRSVFMGLRT-RRLGTRGNSK 66 (76)
T ss_dssp HHHHTTCCCCCHHHHHHHHHHHSTTCEE-EEESSTTCCE
T ss_pred HHHhcCCccCCHHHHHHHHHHHCCCcee-eeccccCCcc
Confidence 6777778899999999999999999854 6788888873
No 74
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=33.12 E-value=1.6e+02 Score=30.41 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=59.4
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC--CC
Q psy7267 88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL--KN 165 (569)
Q Consensus 88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~--~n 165 (569)
..++++.+|-+++.. +.++.+++.++. |. ..=+|-+|-.+++...+.++++...+ ++|.++... -.
T Consensus 82 ~~~kiAflil~h~d~----~~l~rll~~ly~-----p~-n~y~IHvD~ks~~~~~~~~~~~~~~f--~NV~v~~~~~~v~ 149 (391)
T 2gak_A 82 VGFPIAYSIVVHHKI----EMLDRLLRAIYM-----PQ-NFYCIHVDRKAEESFLAAVQGIASCF--DNVFVASQLESVV 149 (391)
T ss_dssp HTSCEEEEEEECSCH----HHHHHHHHHHCC-----TT-SEEEEEECTTSCHHHHHHHHHHHHTC--TTEEECSSCCCCC
T ss_pred cCCCEEEEEEecCCH----HHHHHHHHHHhC-----CC-CeEEEEEeCCCCHHHHHHHHHHHhcC--CCEEEeccCcccc
Confidence 346799999999754 455666665432 21 22334566666666555555554455 688877322 22
Q ss_pred CC---hHHH----HHHHHHhc-cCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267 166 RG---KGGA----VTLGTKCA-RGSIILFADADGATKFADLEKLEDKLKE 207 (569)
Q Consensus 166 ~G---ka~A----lN~Gl~~A-~gd~Vv~lDaD~~~~pd~L~~lv~~~~~ 207 (569)
.| ...| +..+++.. .-+|++.+-+++.+ -.....+.+.+..
T Consensus 150 WGg~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~P-Lkt~~~i~~~l~~ 198 (391)
T 2gak_A 150 YASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFP-IKTNLEIVRKLKC 198 (391)
T ss_dssp TTSHHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEE-SSCHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHhcCCCCCEEEEecCCCcc-ccCHHHHHHHHHh
Confidence 33 2233 33333332 56888888888753 2224444555544
No 75
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=30.41 E-value=2.4e+02 Score=23.64 Aligned_cols=85 Identities=13% Similarity=0.035 Sum_probs=45.3
Q ss_pred cCCCCceEEEEEeCCC---CccHHHHHHHHhHhhCCCeEEEEEcCCC-CChHHHHHHHHHhccCcEEEEEcCCC------
Q psy7267 122 KIPTFKYEIIVVSDGS---TDKTMQVVHQYTEKCGEDIVRGLKLLKN-RGKGGAVTLGTKCARGSIILFADADG------ 191 (569)
Q Consensus 122 ~yp~~~~EIIVVDDgS---tD~T~eil~~~~~~~~~~~V~vi~~~~n-~Gka~AlN~Gl~~A~gd~Vv~lDaD~------ 191 (569)
.|+...++++.|+-.. .|++.+.++++.++++.. ..++..... .+....+...+.......++++|.|.
T Consensus 59 ~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 137 (160)
T 3lor_A 59 MIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIK-FPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQ 137 (160)
T ss_dssp HSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC-SCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEE
T ss_pred HhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCC-CcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEe
Confidence 5666568999886211 234667777777665422 223332221 12211122233333457778888774
Q ss_pred --CCChhhHHHHHHHHHh
Q psy7267 192 --ATKFADLEKLEDKLKE 207 (569)
Q Consensus 192 --~~~pd~L~~lv~~~~~ 207 (569)
..+++.+.+.++.+.+
T Consensus 138 ~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 138 FGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp ESCCCHHHHHHHHHHHHT
T ss_pred cCcCCHHHHHHHHHHHHh
Confidence 3456667777766654
No 76
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=27.80 E-value=76 Score=29.88 Aligned_cols=50 Identities=10% Similarity=0.008 Sum_probs=40.0
Q ss_pred eEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267 156 IVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDKLKE 207 (569)
Q Consensus 156 ~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~ 207 (569)
.+.++. ...|...++..|++....|+++++++|. .++++.+.++++.+.+
T Consensus 83 ~v~~~~--~~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~ 133 (236)
T 2px7_A 83 GAVFLE--GGATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQR 133 (236)
T ss_dssp SCEEEE--CCSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHH
T ss_pred CcEEEe--CCCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHh
Confidence 355554 2346788899999988889999999997 5689999999998765
No 77
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=24.92 E-value=2.8e+02 Score=22.53 Aligned_cols=66 Identities=9% Similarity=0.053 Sum_probs=39.4
Q ss_pred cCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCCC
Q psy7267 122 KIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGAT 193 (569)
Q Consensus 122 ~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~ 193 (569)
.|+...++++.|+-...+++.+.++++.++++ ....++. ..+. .+...+.......++++|.|..+
T Consensus 62 ~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~-~~~~~~~-d~~~----~~~~~~~v~~~P~~~lid~~G~i 127 (145)
T 3erw_A 62 AHPSDSVKLVTVNLVNSEQNQQVVEDFIKANK-LTFPIVL-DSKG----ELMKEYHIITIPTSFLLNEKGEI 127 (145)
T ss_dssp HCCCSSEEEEEEECGGGSSCHHHHHHHHHHTT-CCSCEEE-CSSS----HHHHHTTCCEESEEEEECTTCCE
T ss_pred HcCCCCEEEEEEEccCCcCCHHHHHHHHHHcC-CceeEEE-cCch----hHHHhcCcCccCeEEEEcCCCcE
Confidence 56656789999876665667777788777663 2233443 2221 12222233345778888888753
No 78
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=23.70 E-value=59 Score=32.30 Aligned_cols=75 Identities=17% Similarity=0.100 Sum_probs=46.0
Q ss_pred ceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC--------CC----hHHHHHHHHHh-ccCcEEEEEcCCCCC
Q psy7267 127 KYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN--------RG----KGGAVTLGTKC-ARGSIILFADADGAT 193 (569)
Q Consensus 127 ~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n--------~G----ka~AlN~Gl~~-A~gd~Vv~lDaD~~~ 193 (569)
++.++|++|+-+++..+.++++...++ ..++++..+.. .+ ...++-...+. ...|-|+++|+|..+
T Consensus 30 ~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~ll~~~~kvlyLD~D~iv 108 (311)
T 1g9r_A 30 EIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLV 108 (311)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEE
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHHHHHHhhhcCEEEEEcCCeEe
Confidence 678889999888888888888766542 45666653321 11 11111111121 256899999999887
Q ss_pred ChhhHHHHHH
Q psy7267 194 KFADLEKLED 203 (569)
Q Consensus 194 ~pd~L~~lv~ 203 (569)
-. .+.+|.+
T Consensus 109 ~~-di~eL~~ 117 (311)
T 1g9r_A 109 RD-SLTPLWD 117 (311)
T ss_dssp CS-CCHHHHT
T ss_pred cc-CHHHHhc
Confidence 53 3555554
No 79
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=21.07 E-value=1.4e+02 Score=28.47 Aligned_cols=70 Identities=17% Similarity=0.111 Sum_probs=42.1
Q ss_pred EEEEEeCCCCccHHHHHHHHhHhhCCCeE-EEEEcCCCCChHHHHHHHHHhc------cCcEEEEEcCCCCCChhhHH
Q psy7267 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIV-RGLKLLKNRGKGGAVTLGTKCA------RGSIILFADADGATKFADLE 199 (569)
Q Consensus 129 EIIVVDDgStD~T~eil~~~~~~~~~~~V-~vi~~~~n~Gka~AlN~Gl~~A------~gd~Vv~lDaD~~~~pd~L~ 199 (569)
+|++|-....+ ..+.+++...+++.+.+ .++..+...|-+.|+..|.... ..+-++++++|.......+.
T Consensus 48 ~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~ 124 (255)
T 4evw_A 48 PFLFIVRNVYD-TAVFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFP 124 (255)
T ss_dssp CEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCC
T ss_pred eEEEEECchhh-hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhH
Confidence 66666544334 44455543333321222 2333456689999999999876 35668899999877444443
Done!