Query psy7271
Match_columns 305
No_of_seqs 130 out of 226
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 22:26:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7271.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7271hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 97.1 0.012 4.1E-07 52.8 14.7 73 160-242 151-229 (284)
2 1rlw_A Phospholipase A2, CALB 97.0 0.0066 2.3E-07 47.8 10.3 71 160-242 4-81 (126)
3 1ugk_A Synaptotagmin IV, KIAA1 96.6 0.014 4.7E-07 46.9 10.0 73 160-242 23-101 (138)
4 3f04_A Synaptotagmin-1; C2A, c 96.6 0.0091 3.1E-07 48.2 8.4 74 159-242 34-111 (143)
5 1rsy_A Synaptotagmin I; calciu 96.5 0.009 3.1E-07 49.0 8.4 73 160-242 43-119 (152)
6 1w15_A Synaptotagmin IV; metal 96.4 0.017 5.7E-07 47.3 9.2 73 160-242 31-109 (153)
7 2enp_A B/K protein; C2 type 1, 96.3 0.0038 1.3E-07 50.9 4.9 73 160-242 27-110 (147)
8 2dmg_A KIAA1228 protein; beta- 96.3 0.012 4E-07 47.5 7.5 73 160-242 25-102 (142)
9 3fdw_A Synaptotagmin-like prot 96.2 0.033 1.1E-06 45.3 10.0 73 160-242 24-103 (148)
10 2cm5_A Rabphilin-3A; protein t 96.2 0.023 8E-07 47.2 9.2 74 159-242 37-116 (166)
11 3n5a_A Synaptotagmin-7; calciu 96.2 0.022 7.5E-07 45.2 8.6 73 160-242 17-95 (138)
12 1tjx_A Similar to synaptotagmi 96.2 0.024 8.1E-07 46.7 9.0 73 160-242 26-104 (159)
13 2yrb_A Protein fantom; beta sa 96.2 0.0052 1.8E-07 52.9 5.1 82 151-241 11-99 (156)
14 2b3r_A Phosphatidylinositol-4- 96.1 0.024 8.3E-07 45.7 8.7 73 160-242 21-99 (134)
15 3rdl_A Protein kinase C alpha 96.1 0.04 1.4E-06 43.7 9.9 72 160-242 17-94 (137)
16 1a25_A CALB, protein kinase C 95.8 0.066 2.3E-06 43.5 10.1 72 160-242 32-109 (149)
17 2bwq_A Regulating synaptic mem 95.8 0.051 1.7E-06 42.8 9.1 73 160-242 19-98 (129)
18 2r83_A Synaptotagmin-1; C2A-C2 95.8 0.044 1.5E-06 49.0 9.8 74 159-242 19-96 (284)
19 2dmh_A Myoferlin; beta-sandwic 95.8 0.077 2.6E-06 42.4 10.3 72 159-242 7-81 (140)
20 2d8k_A Synaptotagmin VII; exoc 95.8 0.015 5.1E-07 46.9 6.0 76 158-242 25-104 (141)
21 2chd_A Rabphilin-3A, exophilin 95.7 0.032 1.1E-06 44.9 7.6 75 158-242 28-109 (142)
22 3pyc_A E3 ubiquitin-protein li 95.7 0.13 4.4E-06 40.8 10.9 71 157-242 3-77 (132)
23 3m7f_B E3 ubiquitin-protein li 95.6 0.065 2.2E-06 45.0 9.4 73 157-242 6-85 (176)
24 1dqv_A Synaptotagmin III; beta 95.5 0.063 2.2E-06 48.8 9.8 73 160-242 21-97 (296)
25 3fbk_A RGS3, RGP3, regulator o 95.3 0.13 4.4E-06 42.1 10.0 74 158-242 26-104 (153)
26 2z0u_A WW domain-containing pr 95.0 0.027 9.1E-07 47.1 5.0 73 160-242 44-123 (155)
27 2ep6_A MCTP2 protein; beta san 94.9 0.12 4.3E-06 40.9 8.6 71 156-242 10-84 (133)
28 3kwu_A MUNC13-1; calcium bindi 94.8 0.2 6.8E-06 40.4 9.7 68 159-242 17-88 (148)
29 1v27_A Regulating synaptic mem 94.6 0.046 1.6E-06 43.6 5.2 73 160-242 22-101 (141)
30 2q3x_A Regulating synaptic mem 94.4 0.1 3.5E-06 43.8 7.3 68 160-240 31-106 (171)
31 1wfj_A Putative elicitor-respo 94.4 0.18 6.1E-06 40.0 8.3 71 156-242 7-82 (136)
32 3b7y_A E3 ubiquitin-protein li 94.4 0.17 5.9E-06 41.0 8.3 74 156-242 17-97 (153)
33 1dqv_A Synaptotagmin III; beta 94.4 0.25 8.4E-06 44.8 10.2 73 160-242 153-231 (296)
34 1rh8_A Piccolo protein; beta-s 94.2 0.048 1.7E-06 43.7 4.6 73 160-242 19-107 (142)
35 2nq3_A Itchy homolog E3 ubiqui 94.0 0.28 9.5E-06 41.6 9.3 69 157-242 34-106 (173)
36 1wfm_A Synaptotagmin XIII; C2 92.4 0.42 1.4E-05 38.4 7.5 73 160-242 27-101 (138)
37 3jzy_A Intersectin 2; C2 domai 91.9 0.77 2.6E-05 44.3 10.0 69 159-242 387-459 (510)
38 1cjy_A CPLA2, protein (cytosol 91.1 0.88 3E-05 47.6 10.1 74 158-243 17-97 (749)
39 1gmi_A Protein kinase C, epsil 90.5 1.5 5.2E-05 34.8 8.9 67 160-242 7-88 (136)
40 2fk9_A Protein kinase C, ETA t 87.4 2.9 0.0001 35.0 8.9 69 157-241 27-109 (157)
41 3nsj_A Perforin-1; pore formin 82.3 2.6 8.8E-05 42.4 7.2 71 158-242 393-466 (540)
42 3l9b_A Otoferlin; C2-domain, b 81.4 9.8 0.00034 32.0 9.4 76 154-242 16-91 (144)
43 2cjt_A UNC-13 homolog A, MUNC1 79.3 11 0.00038 29.9 8.9 65 160-241 6-71 (131)
44 1djx_A PLC-D1, phosphoinositid 78.4 8.5 0.00029 39.1 9.6 75 157-242 495-577 (624)
45 2dmh_A Myoferlin; beta-sandwic 74.8 5.8 0.0002 31.1 5.9 46 36-81 84-133 (140)
46 2cjs_A UNC-13 homolog A, MUNC1 68.1 21 0.00071 29.8 8.1 69 156-241 11-80 (167)
47 3l9b_A Otoferlin; C2-domain, b 66.5 10 0.00035 31.8 5.8 47 31-77 89-136 (144)
48 1rlw_A Phospholipase A2, CALB 63.1 14 0.00049 28.1 5.7 42 37-81 84-125 (126)
49 3pfq_A PKC-B, PKC-beta, protei 61.2 46 0.0016 33.5 10.6 72 160-242 173-250 (674)
50 2hje_A Autoinducer 2 sensor ki 59.5 6.3 0.00022 35.5 3.4 24 56-79 118-142 (221)
51 1wfj_A Putative elicitor-respo 58.7 10 0.00035 29.5 4.2 44 37-81 86-130 (136)
52 3ohm_B 1-phosphatidylinositol- 51.6 30 0.001 36.9 7.5 74 158-241 724-801 (885)
53 3c38_A Autoinducer 2 sensor ki 50.6 8.5 0.00029 35.6 2.8 24 56-79 137-161 (270)
54 3m7f_B E3 ubiquitin-protein li 49.9 15 0.00052 30.1 4.1 47 36-82 88-142 (176)
55 2ep6_A MCTP2 protein; beta san 49.9 6.5 0.00022 30.7 1.7 41 37-79 88-130 (133)
56 2zkm_X 1-phosphatidylinositol- 47.5 43 0.0015 35.1 7.9 74 158-241 677-755 (799)
57 3kwu_A MUNC13-1; calcium bindi 46.9 20 0.00069 28.2 4.2 41 36-78 102-144 (148)
58 3b7y_A E3 ubiquitin-protein li 44.6 28 0.00096 27.5 4.8 43 36-78 100-150 (153)
59 2yrb_A Protein fantom; beta sa 44.0 21 0.00071 30.4 4.0 43 37-79 103-148 (156)
60 3qr0_A Phospholipase C-beta (P 41.3 55 0.0019 34.5 7.5 73 158-241 649-727 (816)
61 3bxj_A RAS GTPase-activating p 29.0 10 0.00034 37.1 -0.5 67 161-240 13-79 (483)
62 1p0z_A Sensor kinase CITA; tra 28.2 57 0.0019 25.3 4.0 39 40-78 86-124 (131)
63 3by8_A Sensor protein DCUS; hi 27.8 43 0.0015 26.6 3.2 39 40-78 91-129 (142)
64 2nq3_A Itchy homolog E3 ubiqui 25.4 1.1E+02 0.0038 25.1 5.6 46 36-81 109-161 (173)
65 2wxf_A Phosphatidylinositol-4, 24.8 2.6E+02 0.0089 29.9 9.4 74 159-241 217-294 (940)
66 1gmi_A Protein kinase C, epsil 21.9 1E+02 0.0035 23.7 4.4 17 37-53 92-108 (136)
67 3kpb_A Uncharacterized protein 21.4 61 0.0021 23.8 2.8 17 58-74 94-110 (122)
68 2fk9_A Protein kinase C, ETA t 21.3 60 0.0021 26.8 3.0 17 37-53 114-130 (157)
69 3nqr_A Magnesium and cobalt ef 21.3 62 0.0021 24.3 2.9 17 58-74 100-116 (127)
70 4gqw_A CBS domain-containing p 20.3 65 0.0022 24.5 2.8 17 58-74 117-133 (152)
71 3gby_A Uncharacterized protein 20.0 67 0.0023 24.0 2.8 17 58-74 100-116 (128)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=97.11 E-value=0.012 Score=52.77 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=52.9
Q ss_pred EEEEEEeeccCCCc----ccCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGIST----EYSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~----~ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.++|+|.+|.+|+. ..+|.||+..+..... ....|+.++++. ++.|+.. |.+.|+.+ . +++..|
T Consensus 151 ~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~---nP~wne~--f~f~v~~~--~---l~~~~l 220 (284)
T 2r83_A 151 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTL---NPYYNES--FSFEVPFE--Q---IQKVQV 220 (284)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCS---SCEEEEE--EEEECCTT--T---GGGEEE
T ss_pred ceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCC---CCEEcee--EEEeCCHH--H---hCceEE
Confidence 57899999999996 3578999999875432 346677777763 4678754 66666655 3 356689
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 221 ~i~V~d~d~ 229 (284)
T 2r83_A 221 VVTVLDYDK 229 (284)
T ss_dssp EEEEEECCS
T ss_pred EEEEEeCCC
Confidence 999998754
No 2
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=96.97 E-value=0.0066 Score=47.79 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=53.5
Q ss_pred EEEEEEeeccCCCc-------ccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 160 QFRITVLQAVGIST-------EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 160 ~FrVtIlqAsGLp~-------~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
.++|+|.+|.+|+. ..+|-||...+.+.....+.|+.++++ .++.|+.. |.+.+... +...
T Consensus 4 ~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~-------~~~~ 71 (126)
T 1rlw_A 4 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND---INPVWNET--FEFILDPN-------QENV 71 (126)
T ss_dssp EEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC---SSCEEEEE--EEEEECTT-------SCCE
T ss_pred EEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCC---CCCcccce--EEEEecCC-------CCCE
Confidence 57899999999997 357899999998765567888888876 35678755 55555433 2457
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 72 l~i~V~d~d~ 81 (126)
T 1rlw_A 72 LEITLMDANY 81 (126)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999998754
No 3
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.64 E-value=0.014 Score=46.93 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=54.4
Q ss_pred EEEEEEeeccCCCc-----ccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEe-ecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGIST-----EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSA-TAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~-----~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~-VTee~~fl~yl~~~~L 233 (305)
.++|+|.+|.+|+. ..+|.||+..+.......+.|+.++++ .++.|+.. |.+. ++.+ . +++..|
T Consensus 23 ~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~~v~~~--~---~~~~~l 92 (138)
T 1ugk_A 23 AFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKT---LDPAFDET--FTFYGIPYT--Q---IQELAL 92 (138)
T ss_dssp EEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSC---SSCEEEEE--EEEECCCST--T---GGGCEE
T ss_pred EEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCC---CCCcEeeE--EEEcCcCHH--H---hccCEE
Confidence 57899999999995 346899999998654457888888876 35678754 5553 5544 2 467789
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 93 ~i~V~d~d~ 101 (138)
T 1ugk_A 93 HFTILSFDR 101 (138)
T ss_dssp EEEEEEECS
T ss_pred EEEEEECCC
Confidence 999998754
No 4
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=96.56 E-value=0.0091 Score=48.23 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=55.1
Q ss_pred eEEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 159 LQFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 159 ~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
-.++|+|++|.+|+.. .+|.||+..+.......+.|+.++++ .++.|+.. |.+.|+.+ . +.+..|.
T Consensus 34 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~---l~~~~L~ 103 (143)
T 3f04_A 34 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT---LNPVFNEQ--FTFKVPYS--E---LGGKTLV 103 (143)
T ss_dssp TEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSC---SSCEEEEE--EEECCCHH--H---HTTCEEE
T ss_pred CEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCC---CCCcCcCe--EEEeecHh--h---cCCCEEE
Confidence 3578999999999963 57899999997655557888888877 34578754 55556544 2 4567899
Q ss_pred EEEeeccc
Q psy7271 235 YQVWCSPL 242 (305)
Q Consensus 235 fEVwG~~~ 242 (305)
|+||-+..
T Consensus 104 i~V~d~d~ 111 (143)
T 3f04_A 104 MAVYDFDR 111 (143)
T ss_dssp EEEEECCS
T ss_pred EEEEeCCC
Confidence 99998754
No 5
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.54 E-value=0.009 Score=49.05 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=54.7
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEEE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQIY 235 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~f 235 (305)
.++|+|++|.+|+.. .+|.||+..+.......+.|+.++++ .++.|+.. |.+.|..+ . +.+..|.|
T Consensus 43 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~---l~~~~L~i 112 (152)
T 1rsy_A 43 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT---LNPVFNEQ--FTFKVPYS--E---LGGKTLVM 112 (152)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTC---SSCEEEEE--EEECCCHH--H---HTTCEEEE
T ss_pred EEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCC---CCCcCccc--EEEeecHH--H---cCCCEEEE
Confidence 678999999999963 56899999997654557888888876 35678754 55556543 2 35678999
Q ss_pred EEeeccc
Q psy7271 236 QVWCSPL 242 (305)
Q Consensus 236 EVwG~~~ 242 (305)
+||-+..
T Consensus 113 ~V~d~d~ 119 (152)
T 1rsy_A 113 AVYDFDR 119 (152)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9998754
No 6
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=96.41 E-value=0.017 Score=47.27 Aligned_cols=73 Identities=19% Similarity=0.171 Sum_probs=53.6
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.++|+|++|.+|+.. .+|.||+..+..... ..+.|+.++++ .++.|+. .|.+.|..+ . +++..|
T Consensus 31 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t---~nP~wne--~f~f~v~~~--~---l~~~~l 100 (153)
T 1w15_A 31 TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCT---PNAVFNE--LFVFDIPCE--S---LEEISV 100 (153)
T ss_dssp EEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSC---SSEEEEE--EEEEECCSS--S---STTEEE
T ss_pred EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCC---CCCeecc--eEEEECCHH--H---hCceEE
Confidence 678999999999953 578999999976433 25678888876 3577885 466667665 3 467789
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 101 ~v~V~d~d~ 109 (153)
T 1w15_A 101 EFLVLDSER 109 (153)
T ss_dssp EEEEEECCT
T ss_pred EEEEEeCCC
Confidence 999998754
No 7
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.34 E-value=0.0038 Score=50.85 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=54.0
Q ss_pred EEEEEEeeccCCCcc-----------cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccc
Q psy7271 160 QFRITVLQAVGISTE-----------YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPH 228 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~-----------ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl 228 (305)
.++|+|.+|.+|+.. .+|.||+..+.......+.|+.++++ .++.|+. .|.+.|+.+ . +
T Consensus 27 ~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t---~nP~wne--~f~f~v~~~--~---l 96 (147)
T 2enp_A 27 HLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKT---QKPVFEE--RYTFEIPFL--E---A 96 (147)
T ss_dssp EEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSC---SSCCCCB--CCEECCCHH--H---H
T ss_pred EEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCC---CCCeEee--eEEEEeChH--H---h
Confidence 678999999999973 67899999998654456788888776 3456874 455566554 2 3
Q ss_pred cCCcEEEEEeeccc
Q psy7271 229 QSTSQIYQVWCSPL 242 (305)
Q Consensus 229 ~~~~L~fEVwG~~~ 242 (305)
++..|.|+||-+..
T Consensus 97 ~~~~L~~~V~d~d~ 110 (147)
T 2enp_A 97 QRRTLLLTVVDFDK 110 (147)
T ss_dssp HHSEEEEEEECCST
T ss_pred ccCEEEEEEEECCC
Confidence 56689999998753
No 8
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.28 E-value=0.012 Score=47.48 Aligned_cols=73 Identities=15% Similarity=0.012 Sum_probs=53.6
Q ss_pred EEEEEEeeccCCCccc---CceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 160 QFRITVLQAVGISTEY---SDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~y---sdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
.++|+|.+|.+|+..- +|.||+..+..... ..+.|+.++++ .++.|+.. |.+.|+.+ - +++..|.
T Consensus 25 ~L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~---l~~~~L~ 94 (142)
T 2dmg_A 25 KLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKT---LNPVFDQS--FDFSVSLP--E---VQRRTLD 94 (142)
T ss_dssp EEEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSC---SSCEEEEE--EEECCCHH--H---HHHCEEE
T ss_pred EEEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCC---CCCCcCce--EEEEecHH--H---hCcCEEE
Confidence 5789999999999521 78999999976443 46788888876 35678744 66666544 2 4567899
Q ss_pred EEEeeccc
Q psy7271 235 YQVWCSPL 242 (305)
Q Consensus 235 fEVwG~~~ 242 (305)
|+||-+..
T Consensus 95 i~V~d~d~ 102 (142)
T 2dmg_A 95 VAVKNSGG 102 (142)
T ss_dssp EEEEECCC
T ss_pred EEEEECCC
Confidence 99998753
No 9
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=96.22 E-value=0.033 Score=45.26 Aligned_cols=73 Identities=11% Similarity=0.112 Sum_probs=53.4
Q ss_pred EEEEEEeeccCCCc-----ccCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 160 QFRITVLQAVGIST-----EYSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 160 ~FrVtIlqAsGLp~-----~ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
.++|+|++|.+|+. ..+|.||+..+..... ..+.|..++++ ..+.|+.. |.+.|+.+ . +++..
T Consensus 24 ~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~---~~~~~ 93 (148)
T 3fdw_A 24 SLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDT---VNPLYDET--LRYEIPES--L---LAQRT 93 (148)
T ss_dssp EEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSC---SSCEEEEE--EEEECCST--T---GGGCE
T ss_pred EEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCC---CCCcEeeE--EEEEeChh--H---hCceE
Confidence 57899999999994 2468999999875443 36778888877 34578755 55567665 3 46678
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 94 L~~~V~d~d~ 103 (148)
T 3fdw_A 94 LQFSVWHHGR 103 (148)
T ss_dssp EEEEEEEECG
T ss_pred EEEEEEECCC
Confidence 9999997654
No 10
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=96.21 E-value=0.023 Score=47.18 Aligned_cols=74 Identities=16% Similarity=0.150 Sum_probs=54.4
Q ss_pred eEEEEEEeeccCCCcc----cCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 159 LQFRITVLQAVGISTE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 159 ~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
-.++|+|.+|.+|+.. .+|-||+..+..... ..+.|+.++++ .++.|+.. |.+.|+.+ . +++..
T Consensus 37 ~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~---l~~~~ 106 (166)
T 2cm5_A 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKT---LNPEFNEE--FFYDIKHS--D---LAKKS 106 (166)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSC---SSCEEEEE--EEEECCGG--G---GGGCE
T ss_pred CEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCC---CCCcccce--EEEEcchH--h---cCCCE
Confidence 3678999999999963 578999999976432 46788888876 35678754 66666654 2 46788
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 107 L~i~V~d~d~ 116 (166)
T 2cm5_A 107 LDISVWDYDI 116 (166)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999998754
No 11
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=96.20 E-value=0.022 Score=45.23 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=54.1
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.++|+|.+|.+|+.. .+|.||+..+..... ..+.|+.++++ .++.|+. .|.+.|..+ . +.+..|
T Consensus 17 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t---~nP~wne--~f~f~v~~~--~---l~~~~l 86 (138)
T 3n5a_A 17 SIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRN---LNPIFNE--SFAFDIPTE--K---LRETTI 86 (138)
T ss_dssp EEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSC---SSCEEEE--EEEEECCGG--G---GGGEEE
T ss_pred eEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCC---CCCcCcc--eEEEECChh--h---cCceEE
Confidence 578999999999963 568999999976533 35678888877 3457874 466667665 3 456789
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 87 ~~~V~d~~~ 95 (138)
T 3n5a_A 87 IITVMDKDK 95 (138)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCC
Confidence 999998754
No 12
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=96.18 E-value=0.024 Score=46.74 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=53.7
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.++|+|.+|.+|+.. .+|.||+..+..... ..+.|+.++++ .++.|+. .|.+.|+.+ . +++..|
T Consensus 26 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne--~f~f~v~~~--~---l~~~~l 95 (159)
T 1tjx_A 26 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT---LNPYYNE--SFSFEVPFE--Q---IQKVQV 95 (159)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC---SSCEEEE--EEEEECCGG--G---GGGCEE
T ss_pred EEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCC---CCCcccc--eEEEEcCHH--H---hCCcEE
Confidence 678999999999963 578999999875432 35778888776 3567875 466666554 2 456789
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 96 ~i~V~d~d~ 104 (159)
T 1tjx_A 96 VVTVLDYDK 104 (159)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCC
Confidence 999998754
No 13
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.18 E-value=0.0052 Score=52.87 Aligned_cols=82 Identities=20% Similarity=0.229 Sum_probs=58.6
Q ss_pred CCCCCCCeeEEEEEEeeccCCCccc-------CceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCcc
Q psy7271 151 PHLSPGTELQFRITVLQAVGISTEY-------SDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAA 223 (305)
Q Consensus 151 ~~L~lG~~~~FrVtIlqAsGLp~~y-------sdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~ 223 (305)
.+|..|+.+ |.|.|.+|.==|..+ -.+||-|.||. .| +-+|+-++ |..+.|+.+-.+.|.+..-
T Consensus 11 ~~l~~gEnl-fEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~d-fE-tq~Tpv~~----G~~p~y~fts~Y~V~~d~~-- 81 (156)
T 2yrb_A 11 IHLERGENL-FEIHINKVTFSSEVLQASGDKEPVTFCTYAFYD-FE-LQTTPVVR----GLHPEYNFTSQYLVHVNDL-- 81 (156)
T ss_dssp SSCCSSCEE-EEEEEEEECCCHHHHHHHCSSCCEEEEEECSTT-CC-CEECCCEE----SSSCCCCEEEEEEECCSHH--
T ss_pred hhccCCCcE-EEEEEeEEEEcHHHHhhccccCCcEEEEEEEec-eE-eeeccccc----CCCCCcceEEEEEEEeCHH--
Confidence 466555554 888998887322212 22999999997 33 45554443 3456788888899888776
Q ss_pred ccccccCCcEEEEEeecc
Q psy7271 224 PLHPHQSTSQIYQVWCSP 241 (305)
Q Consensus 224 fl~yl~~~~L~fEVwG~~ 241 (305)
|++||+++.|.+|+.=-.
T Consensus 82 fl~yL~~~~l~lELhqa~ 99 (156)
T 2yrb_A 82 FLQYIQKNTITLEVHQAY 99 (156)
T ss_dssp HHHHHHHCCEEEEEEEEC
T ss_pred HHHHHhcCCEEEEEEEee
Confidence 999999999999998653
No 14
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=96.15 E-value=0.024 Score=45.67 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=53.4
Q ss_pred EEEEEEeeccCCCcc---cCceEEEEEeCCCC--ccceeeCcccCCCCCCCeeeeEEEEEEEe-ecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE---YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNLTSA-TAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~---ysdVFCQy~F~~~~--ee~fsTePvknt~~~~~~~F~hvq~~~V~-VTee~~fl~yl~~~~L 233 (305)
..+|+|.+|.+|+.. .+|-||+..+.... ...+.|+.++++ .++.|+. .|.+. |+.+ . +++..|
T Consensus 21 ~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wnE--~f~f~~v~~~--~---l~~~~L 90 (134)
T 2b3r_A 21 TLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKT---RNPTFNE--MLVYSGYSKE--T---LRQREL 90 (134)
T ss_dssp EEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSC---SSCEEEE--EEEEESCCHH--H---HTTCEE
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCC---CCCCCcc--EEEECCcCHH--H---hCcCEE
Confidence 568999999999963 56899999987542 346788888876 3456875 46666 5544 2 367789
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 91 ~~~V~d~d~ 99 (134)
T 2b3r_A 91 QLSVLSAES 99 (134)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCC
Confidence 999998754
No 15
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=96.14 E-value=0.04 Score=43.74 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=51.6
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCC--CccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHR--HDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~--~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.++|+|.+|.+|+.. .+|.||+..+... ....+.|+.++++ .++.|+.. |.+.+... .+ ...|
T Consensus 17 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t---~nP~wne~--f~f~~~~~--~~----~~~l 85 (137)
T 3rdl_A 17 KLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRST---LNPQWNES--FTFKLKPS--DK----DRRL 85 (137)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSC---SSCEEEEE--EEEECCGG--GG----GCEE
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCC---CCCCcccE--EEEEcCch--hc----CCEE
Confidence 577999999999863 5689999998643 2346788888877 35678754 55556554 22 3469
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 86 ~i~v~d~d~ 94 (137)
T 3rdl_A 86 SVEIWDWDR 94 (137)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCC
Confidence 999998754
No 16
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=95.84 E-value=0.066 Score=43.52 Aligned_cols=72 Identities=11% Similarity=0.152 Sum_probs=52.3
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCC--ccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~--ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.++|+|.+|.+|+.. .+|.||+..+.... ...+.|+.++++ ..+.|+.. |.+.++.. .+ ...|
T Consensus 32 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~~----~~~L 100 (149)
T 1a25_A 32 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCS---LNPEWNET--FRFQLKES--DK----DRRL 100 (149)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSC---SSCEEEEE--EEEECCSG--GG----GCEE
T ss_pred EEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCC---CCCcCCcE--EEEEeccc--cC----CCEE
Confidence 488999999999953 56899999987643 246788888876 35678765 55556654 22 3579
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 101 ~i~V~d~d~ 109 (149)
T 1a25_A 101 SVEIWDWDL 109 (149)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCC
Confidence 999998754
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=95.83 E-value=0.051 Score=42.75 Aligned_cols=73 Identities=15% Similarity=0.216 Sum_probs=52.0
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCC--ccceeeCcccCCCCCCCeeeeEEEEEEEee-cCCccccccccCCc
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNLTSAT-AAHAAPLHPHQSTS 232 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~--ee~fsTePvknt~~~~~~~F~hvq~~~V~V-Tee~~fl~yl~~~~ 232 (305)
.++|+|.+|.+|+.. .+|.||+..+.... ...+.|+.++++ ..+.|+.. |.+.+ ..+ -+.+..
T Consensus 19 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~~~~~~-----~~~~~~ 88 (129)
T 2bwq_A 19 QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKT---LEPKWNQT--FIYSPVHRR-----EFRERM 88 (129)
T ss_dssp EEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSB---SSCEEEEE--EEECSCCGG-----GGGGCE
T ss_pred EEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCC---CCCccccE--EEEccCCHH-----HhcCCe
Confidence 578999999999963 46899999987543 346788888876 35678754 55553 322 246778
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 89 l~~~V~d~d~ 98 (129)
T 2bwq_A 89 LEITLWDQAR 98 (129)
T ss_dssp EEEEEEEC--
T ss_pred EEEEEEECCc
Confidence 9999998754
No 18
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=95.82 E-value=0.044 Score=48.99 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=55.3
Q ss_pred eEEEEEEeeccCCCc----ccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 159 LQFRITVLQAVGIST----EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 159 ~~FrVtIlqAsGLp~----~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
-..+|+|++|.+|+. ..+|.||...+.......+.|+.++++ .++.|+. .|.+.|..+ . ++...|.
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~---~nP~wne--~f~f~v~~~--~---~~~~~l~ 88 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT---LNPVFNE--QFTFKVPYS--E---LAGKTLV 88 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSC---SSCEEEE--EEEECCCGG--G---CTTCEEE
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCC---CCCeeCc--eEEEEechH--H---hCcCEEE
Confidence 367899999999996 357899999997655556788888776 3556874 466666554 2 4677899
Q ss_pred EEEeeccc
Q psy7271 235 YQVWCSPL 242 (305)
Q Consensus 235 fEVwG~~~ 242 (305)
|+||-+..
T Consensus 89 ~~V~d~d~ 96 (284)
T 2r83_A 89 MAVYDFDR 96 (284)
T ss_dssp EEEEECCS
T ss_pred EEEEECCC
Confidence 99998753
No 19
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.82 E-value=0.077 Score=42.38 Aligned_cols=72 Identities=22% Similarity=0.082 Sum_probs=53.2
Q ss_pred eEEEEEEeeccCCCcc---cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEEE
Q psy7271 159 LQFRITVLQAVGISTE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQIY 235 (305)
Q Consensus 159 ~~FrVtIlqAsGLp~~---ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~f 235 (305)
-.++|+|.+|.+|+.. .+|-||...+.+. .+.|+.++++ ..+.|+.. |.+.+... .+ .....|.|
T Consensus 7 g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~---~~kT~v~~~t---~nP~wne~--f~f~v~~~--~~--~~~~~l~i 74 (140)
T 2dmh_A 7 GMLRVIVESASNIPKTKFGKPDPIVSVIFKDE---KKKTKKVDNE---LNPVWNEI--LEFDLRGI--PL--DFSSSLGI 74 (140)
T ss_dssp CEEEEEEEEEESCCCCSSSCCCEEEEEECSSC---EEECCCCCSC---SSCEEEEE--EEEECSSC--CC--CTTCEEEE
T ss_pred cEEEEEEEEeeCCCCCCCCCCCeEEEEEECCE---eEEeeeecCC---CCCccCcE--EEEEeccc--cc--CCCCEEEE
Confidence 3678999999999963 5789999998863 4778888776 35578765 55566654 22 25678999
Q ss_pred EEeeccc
Q psy7271 236 QVWCSPL 242 (305)
Q Consensus 236 EVwG~~~ 242 (305)
+||-+..
T Consensus 75 ~V~d~d~ 81 (140)
T 2dmh_A 75 IVKDFET 81 (140)
T ss_dssp EEEETTC
T ss_pred EEEECCC
Confidence 9998754
No 20
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.81 E-value=0.015 Score=46.89 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=53.8
Q ss_pred eeEEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 158 ELQFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.-.++|+|.+|.+|+.. .+|.||+..+.......+.|+.++++ .++.|+.. |.+.+... +-+....|
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~~~~~----~~~~~~~l 95 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKN---LNPHWNET--FLFEGFPY----EKVVQRIL 95 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTC---SSCCCCEE--EEECSCCH----HHHTTSEE
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCC---CCCccccE--EEECccCH----HHcccCEE
Confidence 34678999999999964 46899999998655556788887766 34568755 44443221 12466789
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 96 ~i~V~d~d~ 104 (141)
T 2d8k_A 96 YLQVLDYDR 104 (141)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCC
Confidence 999998754
No 21
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=95.71 E-value=0.032 Score=44.87 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=54.1
Q ss_pred eeEEEEEEeeccCCCcc----cCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEe-ecCCccccccccC
Q psy7271 158 ELQFRITVLQAVGISTE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSA-TAAHAAPLHPHQS 230 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~-VTee~~fl~yl~~ 230 (305)
.-.++|+|.+|.+|+.. .+|.||+..+..... ..+.|+.++++ .++.|+.. |.+. ++.+ . ++.
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~~~~~~--~---~~~ 97 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNT---RNPVWNET--LQYHGITEE--D---MQR 97 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSC---SSCEEEEE--EEEESCCHH--H---HHH
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCC---CCCcCcCE--EEEcccCHH--H---ccC
Confidence 34678999999999953 568999999986432 46788888876 35678865 5555 5443 2 345
Q ss_pred CcEEEEEeeccc
Q psy7271 231 TSQIYQVWCSPL 242 (305)
Q Consensus 231 ~~L~fEVwG~~~ 242 (305)
..|.|+||-+..
T Consensus 98 ~~l~i~V~d~d~ 109 (142)
T 2chd_A 98 KTLRISVCDEDK 109 (142)
T ss_dssp CEEEEEEEEECT
T ss_pred CEEEEEEEECCC
Confidence 689999998754
No 22
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=95.66 E-value=0.13 Score=40.81 Aligned_cols=71 Identities=24% Similarity=0.283 Sum_probs=51.5
Q ss_pred CeeEEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 157 TELQFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 157 ~~~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
.....+|+|.+|.+|+.. .+|-||...+... ...+.|+.++++ .++.|+..-.| .+... ..
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t---~nP~wne~f~f--~v~~~---------~~ 67 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNT---LDPKWNQHYDL--YVGKT---------DS 67 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSC---SSCEEEEEEEE--EEETT---------CC
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCC---CCCCccCEEEE--EeCCC---------CE
Confidence 356789999999999853 5789999988654 346888888777 35678876444 44433 13
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 68 l~~~v~d~d~ 77 (132)
T 3pyc_A 68 ITISVWNHKK 77 (132)
T ss_dssp EEEEEEEGGG
T ss_pred EEEEEEECCC
Confidence 9999998754
No 23
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=95.60 E-value=0.065 Score=44.95 Aligned_cols=73 Identities=11% Similarity=0.230 Sum_probs=51.6
Q ss_pred CeeEEEEEEeeccCCCcc----cCceEEEEEeCCCCc---cceeeCcccCCCCCCCeeeeEEEEEEEeecCCcccccccc
Q psy7271 157 TELQFRITVLQAVGISTE----YSDIFCQFNFLHRHD---EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQ 229 (305)
Q Consensus 157 ~~~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e---e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~ 229 (305)
..-.++|+|++|.+|+.. .+|-||...+..... ..+.|+.++++ ..+.|+.. |.+.|...
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t---~nP~Wne~--f~f~v~~~-------- 72 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKS---LNPKWNEE--ILFRVLPQ-------- 72 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSC---SSCEEEEE--EEEEECTT--------
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCC---CCCcccce--EEEEEcCC--------
Confidence 445688999999999853 568999999986443 45788888876 35678865 44555543
Q ss_pred CCcEEEEEeeccc
Q psy7271 230 STSQIYQVWCSPL 242 (305)
Q Consensus 230 ~~~L~fEVwG~~~ 242 (305)
...|.|+||-+..
T Consensus 73 ~~~L~~~V~d~d~ 85 (176)
T 3m7f_B 73 RHRILFEVFDENR 85 (176)
T ss_dssp TCEEEEEEEECC-
T ss_pred CCEEEEEEEECCC
Confidence 2579999998754
No 24
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=95.54 E-value=0.063 Score=48.78 Aligned_cols=73 Identities=16% Similarity=0.241 Sum_probs=55.0
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEEE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQIY 235 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~f 235 (305)
.++|+|++|.+|+.. .+|-||+..+.......+.|+.++++ .++.|+.. |.+.|+.+ . +++..|.|
T Consensus 21 ~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~---l~~~~L~~ 90 (296)
T 1dqv_A 21 QLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKT---LNPIFNET--FQFSVPLA--E---LAQRKLHF 90 (296)
T ss_dssp EEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSC---SSCEEEEE--EEEECCGG--G---GSSCCCEE
T ss_pred EEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCC---CCCcEeeE--EEEEecHH--H---hcCCEEEE
Confidence 589999999999963 47899999987555557888888776 35678755 55566544 2 46678999
Q ss_pred EEeeccc
Q psy7271 236 QVWCSPL 242 (305)
Q Consensus 236 EVwG~~~ 242 (305)
+||-+..
T Consensus 91 ~V~d~d~ 97 (296)
T 1dqv_A 91 SVYDFDR 97 (296)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 9998754
No 25
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=95.29 E-value=0.13 Score=42.13 Aligned_cols=74 Identities=11% Similarity=0.195 Sum_probs=52.3
Q ss_pred eeEEEEEEeeccCCCcc---cCceEEEEEeCCCC--ccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 158 ELQFRITVLQAVGISTE---YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~~---ysdVFCQy~F~~~~--ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
.=.++|+|.+|.+|+.. .+|.||+..+.... ...+.|..++++ .++.|+.. |.+.|+.+ .+ .. .
T Consensus 26 ~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~--~~---~~-~ 94 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDC---RDPAFHEH--FFFPVQEE--DD---QK-R 94 (153)
T ss_dssp SSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTC---SSCEEEEE--EEEECCGG--GT---TS-E
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCC---CCCccccE--EEEecccH--Hh---CC-E
Confidence 33578999999999863 57899999987543 235778888876 34678755 55566554 32 22 4
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 95 L~i~V~d~d~ 104 (153)
T 3fbk_A 95 LLVTVWNRAS 104 (153)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEeCCC
Confidence 9999998754
No 26
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=95.01 E-value=0.027 Score=47.13 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=54.5
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCc---cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHD---EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e---e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
..+|+|++|.+|++. .+|-||+..+..... ..+.|+.++++ .++.|+.+ |.+.|+.+ . +....
T Consensus 44 ~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~t---lnP~wnE~--F~f~v~~~--~---l~~~~ 113 (155)
T 2z0u_A 44 QFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDAS---DTLVFNEV--FWVSMSYP--A---LHQKT 113 (155)
T ss_dssp EEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECC---SSEEEEEE--EEEECCHH--H---HHHCE
T ss_pred EEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCC---CCCccccE--EEEEcCHH--H---hCcCE
Confidence 578999999999963 578999999976321 25788888887 35778865 55556654 2 36678
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 114 L~~~V~d~d~ 123 (155)
T 2z0u_A 114 LRVDVCTTDR 123 (155)
T ss_dssp EEEEEEEECT
T ss_pred EEEEEEECCC
Confidence 9999998754
No 27
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=94.92 E-value=0.12 Score=40.93 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=51.7
Q ss_pred CCeeEEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCC
Q psy7271 156 GTELQFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQST 231 (305)
Q Consensus 156 G~~~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~ 231 (305)
-..-.++|+|.+|.+|+.. .+|-||...+.+ ..+.|+.++++ ..+.|+.. |.+.+.+. +.
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~---~~~kT~~~~~t---~nP~wne~--f~f~~~~~--------~~ 73 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN---DRLQTHTVYKN---LNPEWNKV--FTFPIKDI--------HD 73 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT---EEEECCCCSSC---SSCCCCEE--EEEEESCT--------TC
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC---EEEEeeeecCC---CCCccccE--EEEEecCC--------CC
Confidence 3455689999999999953 568999999866 35788888876 34568865 44455432 25
Q ss_pred cEEEEEeeccc
Q psy7271 232 SQIYQVWCSPL 242 (305)
Q Consensus 232 ~L~fEVwG~~~ 242 (305)
.|.|+||-+..
T Consensus 74 ~l~i~V~d~d~ 84 (133)
T 2ep6_A 74 VLEVTVFDEDG 84 (133)
T ss_dssp EEEEEEEEEET
T ss_pred EEEEEEEECCC
Confidence 79999998754
No 28
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=94.81 E-value=0.2 Score=40.36 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=50.3
Q ss_pred eEEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 159 LQFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 159 ~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
=+.+|+|.+|.+|+.. .+|-||...+-. ..+.|+.++++ .++.|+.. |.+.+... +..|.
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~---~~~kT~~~~~t---~nP~Wne~--f~f~v~~~--------~~~l~ 80 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVGK---TKKRTKTIYGN---LNPVWEEN--FHFECHNS--------SDRIK 80 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT---EEEECCCCCSC---SSCEEEEE--EEEEECST--------TCEEE
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC---EEEECCccCCC---CCCCcccE--EEEEecCC--------CCEEE
Confidence 4678999999999963 578999999833 46788888877 34578765 55555433 24699
Q ss_pred EEEeeccc
Q psy7271 235 YQVWCSPL 242 (305)
Q Consensus 235 fEVwG~~~ 242 (305)
|+||-+..
T Consensus 81 ~~v~d~d~ 88 (148)
T 3kwu_A 81 VRVLDEDD 88 (148)
T ss_dssp EEEEECCC
T ss_pred EEEEECCC
Confidence 99998765
No 29
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=94.56 E-value=0.046 Score=43.58 Aligned_cols=73 Identities=15% Similarity=0.216 Sum_probs=52.3
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCC--ccceeeCcccCCCCCCCeeeeEEEEEEEe-ecCCccccccccCCc
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNLTSA-TAAHAAPLHPHQSTS 232 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~--ee~fsTePvknt~~~~~~~F~hvq~~~V~-VTee~~fl~yl~~~~ 232 (305)
.++|+|.+|.+|+.. .+|.||+..+.... ...+.|+.++++ .++.|+.. |.+. +..+ -+.+..
T Consensus 22 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t---~nP~wne~--f~f~~~~~~-----~~~~~~ 91 (141)
T 1v27_A 22 QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKT---LEPKWNQT--FIYSPVHRR-----EFRERM 91 (141)
T ss_dssp EEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSC---SSCCCCCC--CEECSCCTT-----GGGTCE
T ss_pred EEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCC---CCCccccE--EEEccCCHH-----HhcCCE
Confidence 578999999999963 46899999987543 246778888876 34567754 5555 3333 246788
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 92 l~i~V~d~d~ 101 (141)
T 1v27_A 92 LEITLWDQAR 101 (141)
T ss_dssp EEEEEEEBCS
T ss_pred EEEEEEECCC
Confidence 9999998754
No 30
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=94.45 E-value=0.1 Score=43.77 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=49.2
Q ss_pred EEEEEEeeccCCCc-----ccCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 160 QFRITVLQAVGIST-----EYSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 160 ~FrVtIlqAsGLp~-----~ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
.++|+|.+|.+|+. ..+|-||+..+..... ..+.|+.++++ .++.|+.. |.+.|.. +...
T Consensus 31 ~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~--------~~~~ 97 (171)
T 2q3x_A 31 QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKT---LDPLYQQS--LVFDESP--------QGKV 97 (171)
T ss_dssp EEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSC---SSCEEEEE--EECSSCC--------TTEE
T ss_pred EEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCC---CCCCCCcE--EEEEecC--------CCCE
Confidence 57899999999994 3568999999887543 25778888876 34568754 5544532 3468
Q ss_pred EEEEEe-ec
Q psy7271 233 QIYQVW-CS 240 (305)
Q Consensus 233 L~fEVw-G~ 240 (305)
|.|+|| -+
T Consensus 98 L~~~V~~d~ 106 (171)
T 2q3x_A 98 LQVIVWGDY 106 (171)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEcC
Confidence 999999 54
No 31
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=94.39 E-value=0.18 Score=40.00 Aligned_cols=71 Identities=10% Similarity=0.149 Sum_probs=50.8
Q ss_pred CCeeEEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCccc-CCCCCCCeeeeEEEEEEEeecCCccccccccC
Q psy7271 156 GTELQFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVK-NTGKGTPLGFYHIQNLTSATAAHAAPLHPHQS 230 (305)
Q Consensus 156 G~~~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvk-nt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~ 230 (305)
...-.++|+|.+|.+|+.. .+|-||...+..+ .+.|+.++ ++ .++.|+.. |.+.|.. ..
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~kT~~~~~~~---~nP~Wne~--f~f~v~~--------~~ 70 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQ---DQKSNVAEGMG---TTPEWNET--FIFTVSE--------GT 70 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSC---EEECCCCTTCC---SSCEEEEE--EEEEEES--------SC
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCc---cceeEeccCCC---CCCccCcE--EEEEECC--------CC
Confidence 3455788999999999963 4679999998764 36788777 44 35678766 4444443 24
Q ss_pred CcEEEEEeeccc
Q psy7271 231 TSQIYQVWCSPL 242 (305)
Q Consensus 231 ~~L~fEVwG~~~ 242 (305)
..|.|+||-+..
T Consensus 71 ~~l~~~V~d~~~ 82 (136)
T 1wfj_A 71 TELKAKIFDKDV 82 (136)
T ss_dssp CEEEEEECCSSS
T ss_pred CEEEEEEEECCC
Confidence 579999998753
No 32
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=94.36 E-value=0.17 Score=41.00 Aligned_cols=74 Identities=11% Similarity=0.236 Sum_probs=52.3
Q ss_pred CCeeEEEEEEeeccCCCcc----cCceEEEEEeCCCCc---cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccc
Q psy7271 156 GTELQFRITVLQAVGISTE----YSDIFCQFNFLHRHD---EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPH 228 (305)
Q Consensus 156 G~~~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e---e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl 228 (305)
...-.++|+|++|.+|+.. .+|-||...+....+ ..+.|+.++++ .++.|+.. |.+.+...
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~v~~~------- 84 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKS---LNPKWNEE--ILFRVHPQ------- 84 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSC---SSCCCCEE--EEEEECTT-------
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCC---CCCCCCCE--EEEEecCC-------
Confidence 3456789999999999953 568999999885432 46788888876 34568765 44455543
Q ss_pred cCCcEEEEEeeccc
Q psy7271 229 QSTSQIYQVWCSPL 242 (305)
Q Consensus 229 ~~~~L~fEVwG~~~ 242 (305)
+..|.|+||-+..
T Consensus 85 -~~~l~~~V~d~d~ 97 (153)
T 3b7y_A 85 -QHRLLFEVFDENR 97 (153)
T ss_dssp -TCEEEEEEEECCS
T ss_pred -CCEEEEEEEECCC
Confidence 3579999998754
No 33
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=94.36 E-value=0.25 Score=44.83 Aligned_cols=73 Identities=15% Similarity=0.119 Sum_probs=52.9
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCC--ccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~--ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.++|+|++|.+|+.. .+|.||+..+.... .....|..++++. ++.|+.. |.+.|+.+ - +++..|
T Consensus 153 ~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~---nP~wne~--f~f~v~~~--~---l~~~~L 222 (296)
T 1dqv_A 153 LLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTL---NPTYNEA--LVFDVAPE--S---VENVGL 222 (296)
T ss_dssp EEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCS---SCEEEEC--CCCCCCSG--G---GGSCCC
T ss_pred eeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCC---CCeECce--EEEEcCHH--H---ccCcEE
Confidence 578999999999853 56899999987422 2356788777763 4578754 55567665 3 366789
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 223 ~i~V~d~d~ 231 (296)
T 1dqv_A 223 SIAVVDYDC 231 (296)
T ss_dssp CCEEEECCS
T ss_pred EEEEEeCCC
Confidence 999998754
No 34
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=94.21 E-value=0.048 Score=43.69 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=52.1
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCc-----------cceeeCcccCCCCCCCeeeeEEEEEEEe-ecCCcc
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHD-----------EAFSTEPVKNTGKGTPLGFYHIQNLTSA-TAAHAA 223 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e-----------e~fsTePvknt~~~~~~~F~hvq~~~V~-VTee~~ 223 (305)
.++|+|++|.+|+.. .+|-||+..+..... ..+.|+.++++ .++.|+.. |.+. |+.+
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t---~nP~wne~--f~f~~v~~~-- 91 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKS---LNPEWNQT--VIYKSISME-- 91 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHH---HSCEEEEE--EEECSCCHH--
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCC---CCCCCCCE--EEECCcCHH--
Confidence 578999999999963 578999999987542 23567777765 35678765 5544 4433
Q ss_pred ccccccCCcEEEEEeeccc
Q psy7271 224 PLHPHQSTSQIYQVWCSPL 242 (305)
Q Consensus 224 fl~yl~~~~L~fEVwG~~~ 242 (305)
. +.+..|.|+||-+..
T Consensus 92 ~---l~~~~l~i~V~d~d~ 107 (142)
T 1rh8_A 92 Q---LMKKTLEVTVWDYDR 107 (142)
T ss_dssp H---HTTCEEEEEEEEECS
T ss_pred H---ccCCEEEEEEEECCC
Confidence 1 467789999998754
No 35
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=94.01 E-value=0.28 Score=41.60 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=50.0
Q ss_pred CeeEEEEEEeeccCCC-cc---cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCc
Q psy7271 157 TELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTS 232 (305)
Q Consensus 157 ~~~~FrVtIlqAsGLp-~~---ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~ 232 (305)
..-+.+|+|.+|.+|+ .. -+|-||+..+.+ ..+.|+.++++ ..+.|+.. |.+.|++ ...
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~---~~~kT~v~~~t---lnP~Wne~--f~f~v~~---------~~~ 96 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG---QSKKTEKCNNT---NSPKWKQP--LTVIVTP---------VSK 96 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT---EEEECCCCSSC---SSCEEEEE--EEEEECT---------TCE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC---EEeEccccCCC---CCCeECCE--EEEEeCC---------CCE
Confidence 3456899999999999 32 268999998865 46788888776 35678765 4444532 456
Q ss_pred EEEEEeeccc
Q psy7271 233 QIYQVWCSPL 242 (305)
Q Consensus 233 L~fEVwG~~~ 242 (305)
|.|+||-+..
T Consensus 97 L~~~V~D~d~ 106 (173)
T 2nq3_A 97 LHFRVWSHQT 106 (173)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999998754
No 36
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=92.42 E-value=0.42 Score=38.37 Aligned_cols=73 Identities=15% Similarity=0.044 Sum_probs=50.6
Q ss_pred EEEEEEeeccCCCc-ccCceEEEEEeCCC-CccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEEEEE
Q psy7271 160 QFRITVLQAVGIST-EYSDIFCQFNFLHR-HDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQIYQV 237 (305)
Q Consensus 160 ~FrVtIlqAsGLp~-~ysdVFCQy~F~~~-~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~fEV 237 (305)
..+|+|.+|..... ..+|-||+..+... ....+.|+.++++ .++.|+.+ |.+.|..+ . +++..|.|+|
T Consensus 27 ~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~t---lnP~wnE~--f~f~v~~~--~---l~~~~L~~~V 96 (138)
T 1wfm_A 27 ELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQ---LHTTWEEG--LVLPLAEE--E---LPTATLTLTL 96 (138)
T ss_dssp EEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEECCCCCCC---SSEECSSC--EEEECCTT--S---STTCEEEEEE
T ss_pred EEEEEEEEEEcCCCCCCcceEEEEEEEcCCCcccEecccCcCC---CCCcCCce--EEEEecHH--H---cCCCEEEEEE
Confidence 56788999985432 36789999998653 2235678887776 35678765 44456655 3 4677899999
Q ss_pred eeccc
Q psy7271 238 WCSPL 242 (305)
Q Consensus 238 wG~~~ 242 (305)
|-+..
T Consensus 97 ~d~d~ 101 (138)
T 1wfm_A 97 RTCDR 101 (138)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 98753
No 37
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=91.88 E-value=0.77 Score=44.34 Aligned_cols=69 Identities=9% Similarity=0.133 Sum_probs=50.6
Q ss_pred eEEEEEEeeccCCCcc----cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 159 LQFRITVLQAVGISTE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 159 ~~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
-+++|+|.+|.||+.. .+|-||...+.. ..+.|+.++++ .++.|+.. |.+.+... ....|.
T Consensus 387 ~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~---~~~~T~~~~~t---~nP~w~e~--f~f~~~~~-------~~~~l~ 451 (510)
T 3jzy_A 387 GRLMVHVIEATELKACKPNGKSNPYCEISMGS---QSYTTRTIQDT---LNPKWNFN--CQFFIKDL-------YQDVLC 451 (510)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT---EEEECCCCSSC---SSCEEEEE--EEEEESCT-------TTCEEE
T ss_pred ceEEEEeceeecCCCCCCCCCCCeEEEEEECC---eeccCCccCCC---CCCccCce--EEEEecCC-------CCCEEE
Confidence 4689999999999753 578999999843 46788888877 34578755 44445332 345799
Q ss_pred EEEeeccc
Q psy7271 235 YQVWCSPL 242 (305)
Q Consensus 235 fEVwG~~~ 242 (305)
|+||-+..
T Consensus 452 ~~v~d~d~ 459 (510)
T 3jzy_A 452 LTLFDRDQ 459 (510)
T ss_dssp EEEEECCS
T ss_pred EEEEeCCC
Confidence 99998765
No 38
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=91.12 E-value=0.88 Score=47.65 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=55.5
Q ss_pred eeEEEEEEeeccCCCc-------ccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccC
Q psy7271 158 ELQFRITVLQAVGIST-------EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQS 230 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~-------~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~ 230 (305)
.-..+|+|++|.+|+. ..+|-||+..+.......+.|+.++++ ..+.|+.+ |.+.|... ..
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~t---lNPvWNEt--F~F~v~~~-------~~ 84 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND---INPVWNET--FEFILDPN-------QE 84 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC---SSCEEEEE--EEEEECTT-------SC
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCC---CCCeeeeE--EEEEecCC-------CC
Confidence 4568999999999997 257899999998765567888888876 35678754 55555543 34
Q ss_pred CcEEEEEeecccc
Q psy7271 231 TSQIYQVWCSPLA 243 (305)
Q Consensus 231 ~~L~fEVwG~~~~ 243 (305)
..|.|+||-+..-
T Consensus 85 ~~L~~~V~D~D~~ 97 (749)
T 1cjy_A 85 NVLEITLMDANYV 97 (749)
T ss_dssp CBCEEEEEECCSS
T ss_pred CEEEEEEEECCCC
Confidence 4799999988654
No 39
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=90.47 E-value=1.5 Score=34.75 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=45.2
Q ss_pred EEEEEEeeccCCCcc---------------cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccc
Q psy7271 160 QFRITVLQAVGISTE---------------YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAP 224 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~---------------ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~f 224 (305)
..+|+|.+|.+|++. .+|-||...+-+ .....|+..+++ .++.|+.. |.+.|.+.
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~--~~~~~T~~~~~t---~nP~WnE~--f~f~v~~~--- 76 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD--SRIGQTATKQKT---NSPAWHDE--FVTDVCNG--- 76 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT--EEEEECCCCSSC---SSCEEEEE--EEEEEEEE---
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC--eEeeeeeEECCC---cCCccCCE--EEEEecCC---
Confidence 578999999999853 288999998733 223456655555 35678765 44444321
Q ss_pred cccccCCcEEEEEeeccc
Q psy7271 225 LHPHQSTSQIYQVWCSPL 242 (305)
Q Consensus 225 l~yl~~~~L~fEVwG~~~ 242 (305)
..|.|+||-+..
T Consensus 77 ------~~L~~~V~d~d~ 88 (136)
T 1gmi_A 77 ------RKIELAVFHDAP 88 (136)
T ss_dssp ------CEEEEEEEECCS
T ss_pred ------CEEEEEEEeCCC
Confidence 469999998653
No 40
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=87.36 E-value=2.9 Score=35.02 Aligned_cols=69 Identities=12% Similarity=0.092 Sum_probs=47.9
Q ss_pred CeeEEEEEEeeccCCCcc--------------cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCc
Q psy7271 157 TELQFRITVLQAVGISTE--------------YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHA 222 (305)
Q Consensus 157 ~~~~FrVtIlqAsGLp~~--------------ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~ 222 (305)
..=..+|+|.+|.+|++. .+|-||....-+. ....|...++| .++.|+-. |.+.|.+.
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~--~~~kT~v~~kt---lnP~WNE~--F~f~v~~~- 98 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQV--RVGQTSTKQKT---NKPTYNEE--FCANVTDG- 98 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTE--EEEECCCCSSC---SSCEEEEE--EEEEEEEE-
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCE--eeEEeeecCCC---CCCccCcE--EEEEcCCC-
Confidence 345789999999999853 4789999987442 24567776666 34578755 55555432
Q ss_pred cccccccCCcEEEEEeecc
Q psy7271 223 APLHPHQSTSQIYQVWCSP 241 (305)
Q Consensus 223 ~fl~yl~~~~L~fEVwG~~ 241 (305)
..|.|+||-..
T Consensus 99 --------~~L~~~V~D~d 109 (157)
T 2fk9_A 99 --------GHLELAVFHET 109 (157)
T ss_dssp --------CEEEEEEEECC
T ss_pred --------CEEEEEEEECC
Confidence 36899999754
No 41
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=82.28 E-value=2.6 Score=42.39 Aligned_cols=71 Identities=14% Similarity=0.147 Sum_probs=50.9
Q ss_pred eeEEEEEEeeccCCCcc---cCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 158 ELQFRITVLQAVGISTE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~~---ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
.-..+|+|++|.+|+.. .+|-||+..+.+. .+.|+.++++. ++.|+-+-.|. +.+. -....|.
T Consensus 393 ~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~---~~kTkvik~tl---NP~Wne~f~f~--~~~~------~~~~~L~ 458 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQ---EFRTGVVWNNN---NPRWTDKMDFE--NVLL------STGGPLR 458 (540)
T ss_dssp EEEEEEEEEEEESCCCSSCSCCCEEEEEEETTE---EEECCCBCSCS---SCBCCCCEEEE--EEET------TTCCCEE
T ss_pred ccEEEEEEEEccCCCcccCCCcCeEEEEEECCE---eeeeeeecCCC---CCCCCeEEEEE--EecC------CCCCEEE
Confidence 45889999999999874 4679999988652 38899998873 45677543333 2111 1456899
Q ss_pred EEEeeccc
Q psy7271 235 YQVWCSPL 242 (305)
Q Consensus 235 fEVwG~~~ 242 (305)
||||-+..
T Consensus 459 ~~V~D~D~ 466 (540)
T 3nsj_A 459 VQVWDADY 466 (540)
T ss_dssp EEEEECCS
T ss_pred EEEEECCC
Confidence 99999765
No 42
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=81.42 E-value=9.8 Score=31.99 Aligned_cols=76 Identities=12% Similarity=0.220 Sum_probs=54.5
Q ss_pred CCCCeeEEEEEEeeccCCCcccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 154 SPGTELQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 154 ~lG~~~~FrVtIlqAsGLp~~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
.-|+.+-++|+|+.|+|||. -+|=+++-.| + ...+.|+-+++.+ ..+.|+.+ |.-++.-. + ..+..|
T Consensus 16 ~~~~~msL~V~l~~a~~Lpg-~~Dp~akv~F--R-g~k~kTkvi~~~~--~npvfnE~--F~wpl~~~---l--d~~e~L 82 (144)
T 3l9b_A 16 PRGSHMALIVHLKTVSELRG-RADRIAKVTF--R-GQSFYSRVLENCE--DVADFDET--FRWPVASS---I--DRNEVL 82 (144)
T ss_dssp ---CCEEEEEEEEEEESCCS-CEEEEEEEEE--T-TEEEECCCEEEEC--SCEEEEEE--EEEEESSC---C--CTTCEE
T ss_pred cCCCcEEEEEEEEEecCCCC-CCCCeEEEEE--e-ccceeeEEeccCC--CCceEcce--EEecCCCC---C--CCCCEE
Confidence 46999999999999999995 5567777777 3 3577889987422 35678775 65577655 2 578889
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+|+=+.+
T Consensus 83 ~v~V~d~~~ 91 (144)
T 3l9b_A 83 EIQIFNYSK 91 (144)
T ss_dssp EEEEEEECT
T ss_pred EEEEEECcc
Confidence 999988643
No 43
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=79.33 E-value=11 Score=29.88 Aligned_cols=65 Identities=9% Similarity=0.088 Sum_probs=41.9
Q ss_pred EEEEEEeeccCCCc-ccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEEEEEe
Q psy7271 160 QFRITVLQAVGIST-EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQIYQVW 238 (305)
Q Consensus 160 ~FrVtIlqAsGLp~-~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~fEVw 238 (305)
..+|+|++|.+++. ..+|-||... .+ . +.|..+++. +.++.|+..-.| .|+.. +..|.|+||
T Consensus 6 ~L~V~V~~A~~l~~~g~~DPYv~v~--~~--~-~kt~~~~~~--t~nP~WnE~f~f--~v~~~--------~~~L~~~V~ 68 (131)
T 2cjt_A 6 LLCVGVKKAKFDGAQEKFNTYVTLK--VQ--N-VKSTTIAVR--GSQPSWEQDFMF--EINRL--------DLGLTVEVW 68 (131)
T ss_dssp EEEEEEEEEECSSCGGGCEEEEEEE--ET--T-EEEECCCEE--SSSCEEEEEEEE--EECCC--------SSEEEEEEE
T ss_pred EEEEEEEEeECCCCCCCcCeEEEEE--ec--C-EEEeEecCC--CCCceECCEEEE--EEeCC--------CCeEEEEEE
Confidence 56899999999974 3678999998 21 1 223334321 235678766444 45432 235999999
Q ss_pred ecc
Q psy7271 239 CSP 241 (305)
Q Consensus 239 G~~ 241 (305)
-+.
T Consensus 69 D~d 71 (131)
T 2cjt_A 69 NKG 71 (131)
T ss_dssp ECC
T ss_pred ECC
Confidence 886
No 44
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=78.45 E-value=8.5 Score=39.14 Aligned_cols=75 Identities=9% Similarity=-0.008 Sum_probs=54.4
Q ss_pred CeeEEEEEEeeccCCCcc------cCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccc
Q psy7271 157 TELQFRITVLQAVGISTE------YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPH 228 (305)
Q Consensus 157 ~~~~FrVtIlqAsGLp~~------ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl 228 (305)
...+++|+|..|.+||.. .+|-||+..+.+.+. ....|..+++++ .++.|+.+ |++.|+.. .+
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng--~NP~WnE~--f~F~v~~~--el--- 565 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNG--FNPRWDME--FEFEVTVP--DL--- 565 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCS--SSCEEEEE--EEEEESCG--GG---
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCC--CCCccCce--EEEEEecC--CC---
Confidence 678899999999999953 467999999876422 356788888774 35678865 55556544 22
Q ss_pred cCCcEEEEEeeccc
Q psy7271 229 QSTSQIYQVWCSPL 242 (305)
Q Consensus 229 ~~~~L~fEVwG~~~ 242 (305)
..|.|+||-+..
T Consensus 566 --~~L~~~V~D~D~ 577 (624)
T 1djx_A 566 --ALVRFMVEDYDS 577 (624)
T ss_dssp --CEEEEEEEECCS
T ss_pred --CEEEEEEEEcCC
Confidence 368999999854
No 45
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.78 E-value=5.8 Score=31.10 Aligned_cols=46 Identities=24% Similarity=0.318 Sum_probs=34.4
Q ss_pred ceEEEEeeeEeecccccccCccee---eeEEcCCC-CeeEEEEEEEEEec
Q psy7271 36 WFRLVGRAFVYLSNLMYPIPLIQK---VAIVNEKG-DVKGHLKIAVQIVT 81 (305)
Q Consensus 36 ~~~lIGrA~VyL~nL~y~V~l~~~---V~Ivs~~G-ev~G~L~V~V~p~~ 81 (305)
...+||.+.+-|+.|.-.-..+.- +++.+.+| ...|.|+|.+.=..
T Consensus 84 ~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 346899999999999776655544 45888777 46699999887554
No 46
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=68.08 E-value=21 Score=29.77 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=44.5
Q ss_pred CCeeEEEEEEeeccCCCc-ccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 156 GTELQFRITVLQAVGIST-EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 156 G~~~~FrVtIlqAsGLp~-~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
|..-..+|+|++|.+++. ..+|.||... .+ .+.|..+++. +.++.|+.. |.+.|+.. +..|.
T Consensus 11 g~~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~---~~kt~~~~~~--t~nP~WnE~--f~f~v~~~--------~~~L~ 73 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDGAQEKFNTYVTLK--VQ---NVESTTIAVR--GSQPSWEQD--FMFEINRL--------DLGLT 73 (167)
T ss_dssp SCCCEEEEEEEEEECSSCGGGCEEEEEEE--ET---TEEEECCCEE--SSSCEEEEE--EEEECCCT--------TSEEE
T ss_pred CceEEEEEEEEEEECCCCCCCCCeEEEEE--ec---ceEEEEecCC--CCCCCCCCE--EEEEeeCC--------CCEEE
Confidence 344578899999999874 3678999998 22 1334444421 235678866 44445532 23599
Q ss_pred EEEeecc
Q psy7271 235 YQVWCSP 241 (305)
Q Consensus 235 fEVwG~~ 241 (305)
|+||-+.
T Consensus 74 ~~V~D~d 80 (167)
T 2cjs_A 74 VEVWNKG 80 (167)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999986
No 47
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=66.49 E-value=10 Score=31.85 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=39.0
Q ss_pred CCCCCceEEEEeeeEeecccccccCcceeeeEEcCCCCee-EEEEEEE
Q psy7271 31 YDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVK-GHLKIAV 77 (305)
Q Consensus 31 yd~~~~~~lIGrA~VyL~nL~y~V~l~~~V~Ivs~~Gev~-G~L~V~V 77 (305)
|+++-..++||.+.|-|+.|.-.-.+.-..+|+|.+++.. |.+.++|
T Consensus 89 ~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l 136 (144)
T 3l9b_A 89 YSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEV 136 (144)
T ss_dssp ECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEE
Confidence 5666667899999999999998888888899999999988 5544444
No 48
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=63.11 E-value=14 Score=28.13 Aligned_cols=42 Identities=10% Similarity=0.028 Sum_probs=32.6
Q ss_pred eEEEEeeeEeecccccccCcceeeeEEcCCCCeeEEEEEEEEEec
Q psy7271 37 FRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVT 81 (305)
Q Consensus 37 ~~lIGrA~VyL~nL~y~V~l~~~V~Ivs~~Gev~G~L~V~V~p~~ 81 (305)
..+||.+.+-|+.|.-....+.-.++.. .-+|.|++.++.++
T Consensus 84 ~~~iG~~~i~l~~l~~~~~~~~~~~L~~---~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 84 DETLGTATFTVSSMKVGEKKEVPFIFNQ---VTEMVLEMSLEVAS 125 (126)
T ss_dssp CEEEEEEEEEGGGSCTTCEEEEEEEETT---TEEEEEEEEEECCC
T ss_pred CceeEEEEEEHHHccCCCcEEEEEEcCC---CceEEEEEEEEeCC
Confidence 4589999999999987776666677643 55788888888764
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=61.20 E-value=46 Score=33.49 Aligned_cols=72 Identities=11% Similarity=0.170 Sum_probs=50.3
Q ss_pred EEEEEEeeccCCCcc----cCceEEEEEeCCCCc--cceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcE
Q psy7271 160 QFRITVLQAVGISTE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 160 ~FrVtIlqAsGLp~~----ysdVFCQy~F~~~~e--e~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L 233 (305)
...|+|.+|.+|++. .+|-|++..+..... ....|+.++++ .++.|+.. |.+.+.+. . .+..|
T Consensus 173 ~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~t---lnP~wne~--f~f~~~~~--~----~~~~L 241 (674)
T 3pfq_A 173 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSS---LNPEWNET--FRFQLKES--D----KDRRL 241 (674)
T ss_dssp EEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSC---SSCEEEEE--EEEECCST--T----TTCEE
T ss_pred eeeeeeecccccCCCCcccccCcccccccccCccccccccccccccc---cCCCccce--eeeecccC--C----cccee
Confidence 367899999999863 578999998864432 35678888877 34578765 44455544 2 33469
Q ss_pred EEEEeeccc
Q psy7271 234 IYQVWCSPL 242 (305)
Q Consensus 234 ~fEVwG~~~ 242 (305)
.|+||-+..
T Consensus 242 ~v~v~d~d~ 250 (674)
T 3pfq_A 242 SVEIWDWDL 250 (674)
T ss_dssp EEEEEECCS
T ss_pred eeEEeeccc
Confidence 999998754
No 50
>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*
Probab=59.52 E-value=6.3 Score=35.47 Aligned_cols=24 Identities=33% Similarity=0.546 Sum_probs=21.2
Q ss_pred cceeeeEEc-CCCCeeEEEEEEEEE
Q psy7271 56 LIQKVAIVN-EKGDVKGHLKIAVQI 79 (305)
Q Consensus 56 l~~~V~Ivs-~~Gev~G~L~V~V~p 79 (305)
|..++||++ ..|||.|+|-++|.=
T Consensus 118 LvRR~pIi~~~tGeVlG~Ly~gvVL 142 (221)
T 2hje_A 118 LVRRVPILDPSTGEVLGFSFNAVVL 142 (221)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEC
T ss_pred EEEccceecCCCCcEEEEEEEEEEe
Confidence 567899999 899999999999864
No 51
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=58.69 E-value=10 Score=29.46 Aligned_cols=44 Identities=18% Similarity=0.163 Sum_probs=32.0
Q ss_pred eEEEEeeeEeeccccccc-CcceeeeEEcCCCCeeEEEEEEEEEec
Q psy7271 37 FRLVGRAFVYLSNLMYPI-PLIQKVAIVNEKGDVKGHLKIAVQIVT 81 (305)
Q Consensus 37 ~~lIGrA~VyL~nL~y~V-~l~~~V~Ivs~~Gev~G~L~V~V~p~~ 81 (305)
..+||.+.|-|+.|+-.- ....-.++. .+|...|.|++.+.=..
T Consensus 86 d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~~~G~i~l~l~~~p 130 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEEYKGEIWVALSFKP 130 (136)
T ss_dssp TCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTEEEEEEEEEEEEEE
T ss_pred CceEEEEEEEHHHhccCCCCCcEEEEee-cCCccCEEEEEEEEEEe
Confidence 468999999999985432 223345666 67889999999887664
No 52
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=51.57 E-value=30 Score=36.88 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=50.4
Q ss_pred eeEEEEEEeeccCCCcccCceEEEEEeCCCCc---cceeeCcccCCCCCCCeeeeE-EEEEEEeecCCccccccccCCcE
Q psy7271 158 ELQFRITVLQAVGISTEYSDIFCQFNFLHRHD---EAFSTEPVKNTGKGTPLGFYH-IQNLTSATAAHAAPLHPHQSTSQ 233 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~~ysdVFCQy~F~~~~e---e~fsTePvknt~~~~~~~F~h-vq~~~V~VTee~~fl~yl~~~~L 233 (305)
..+++|+|+.|.+||..-+|-|+...+.+.+. ..+.|..+++++ .++.|+. +-.|. .|+-. .+ ..|
T Consensus 724 ~~~L~V~Visaq~L~~~~~DPYV~V~l~g~p~D~~~k~kTkvi~~Ng--lNPvWnEe~F~F~-~V~~p--el-----a~L 793 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTSQGNS--FNPVWDEEPFDFP-KVVLP--TL-----ASL 793 (885)
T ss_dssp CEEEEEEEEEEESCCSSCCCEEEEEEEESSTTTCBCCCCCCCCSSCS--SSCBCCCCCEEEE-EESCG--GG-----CEE
T ss_pred ceEEEEEEEEeccCcccCCCcEEEEEEeCCCcccccceeeEEeeCCC--cCCeeccceeEEe-eEEcC--Cc-----CEE
Confidence 56899999999999988888999999887322 136788777654 3456775 33343 13322 12 248
Q ss_pred EEEEeecc
Q psy7271 234 IYQVWCSP 241 (305)
Q Consensus 234 ~fEVwG~~ 241 (305)
.|+||-+.
T Consensus 794 rf~V~D~d 801 (885)
T 3ohm_B 794 RIAAFEEG 801 (885)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 99999875
No 53
>3c38_A Autoinducer 2 sensor kinase/phosphatase LUXQ; 2-component system, quorum sensing, histidine kinase, hydrolase, inner membrane, membrane; 2.30A {Vibrio cholerae} PDB: 3c30_A
Probab=50.62 E-value=8.5 Score=35.60 Aligned_cols=24 Identities=21% Similarity=0.562 Sum_probs=20.3
Q ss_pred cceeeeEEc-CCCCeeEEEEEEEEE
Q psy7271 56 LIQKVAIVN-EKGDVKGHLKIAVQI 79 (305)
Q Consensus 56 l~~~V~Ivs-~~Gev~G~L~V~V~p 79 (305)
|..++||++ ..|||.|+|-++|.=
T Consensus 137 LvRr~pIid~~TGEVlG~Ly~gvVL 161 (270)
T 3c38_A 137 LMRRSSLIEAGTGQVVGYLYVGIVL 161 (270)
T ss_dssp EEEEEEECCCC-CCCCEEEEEEEEC
T ss_pred EEEccceecCCCCcEEEEEEEEEEe
Confidence 567899999 889999999999864
No 54
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=49.95 E-value=15 Score=30.13 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=31.3
Q ss_pred ceEEEEeeeEeecccccccCc-c-----eeeeEE--cCCCCeeEEEEEEEEEecC
Q psy7271 36 WFRLVGRAFVYLSNLMYPIPL-I-----QKVAIV--NEKGDVKGHLKIAVQIVTD 82 (305)
Q Consensus 36 ~~~lIGrA~VyL~nL~y~V~l-~-----~~V~Iv--s~~Gev~G~L~V~V~p~~~ 82 (305)
...+||.+.|-|..|...-.. + .-.++. ..++.++|.|+|.+.=+..
T Consensus 88 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 88 RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp -CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 346899999999999876433 1 233443 3567788999999887754
No 55
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=49.88 E-value=6.5 Score=30.67 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=29.3
Q ss_pred eEEEEeeeEeecccccccCcceeeeEEcCC--CCeeEEEEEEEEE
Q psy7271 37 FRLVGRAFVYLSNLMYPIPLIQKVAIVNEK--GDVKGHLKIAVQI 79 (305)
Q Consensus 37 ~~lIGrA~VyL~nL~y~V~l~~~V~Ivs~~--Gev~G~L~V~V~p 79 (305)
..+||.+.+-|+.|.-.. .+-.++.+.+ +...|.|+|.+.=
T Consensus 88 ~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 88 PDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp EEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred CCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEE
Confidence 457999999999986543 3455666644 4577999988763
No 56
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=47.52 E-value=43 Score=35.05 Aligned_cols=74 Identities=12% Similarity=0.061 Sum_probs=50.4
Q ss_pred eeEEEEEEeeccCCCcccCceEEEEEeCCCC-c--cceeeC-cccCCCCCCCeeeeEEEEEEE-eecCCccccccccCCc
Q psy7271 158 ELQFRITVLQAVGISTEYSDIFCQFNFLHRH-D--EAFSTE-PVKNTGKGTPLGFYHIQNLTS-ATAAHAAPLHPHQSTS 232 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~~ysdVFCQy~F~~~~-e--e~fsTe-Pvknt~~~~~~~F~hvq~~~V-~VTee~~fl~yl~~~~ 232 (305)
.-++.|+|..|.+||...+|-|++..+.+.+ + ..+.|. .+++++ .++.|+.. .|+. .|+.. .+. .
T Consensus 677 ~~~L~V~Visa~~L~~~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~--~NPvWnEe-~f~F~~v~~~--el~-----~ 746 (799)
T 2zkm_X 677 ATTLSITVISGQFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNS--INPVWKEE-PFVFEKILMP--ELA-----S 746 (799)
T ss_dssp CEEEEEEEEEEESCCSSCCCEEEEEEEECCTTSCCCCEECCCCSSSCC--SSCBCCCC-CEEEEEESSG--GGC-----E
T ss_pred eeeEEEEEEeccccCccCCCcEEEEEEEecCCCcccceeecccccCCC--CCCeeecc-eEEEEEEccC--Ccc-----E
Confidence 4478899999999998888999999987633 2 236788 776653 34567761 1444 34333 222 5
Q ss_pred EEEEEeecc
Q psy7271 233 QIYQVWCSP 241 (305)
Q Consensus 233 L~fEVwG~~ 241 (305)
|.|+||-+.
T Consensus 747 Lr~~V~D~d 755 (799)
T 2zkm_X 747 LRVAVMEEG 755 (799)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEEeC
Confidence 899999875
No 57
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=46.89 E-value=20 Score=28.20 Aligned_cols=41 Identities=12% Similarity=0.202 Sum_probs=27.9
Q ss_pred ceEEEEeeeEeecccccccCcceeeeEE--cCCCCeeEEEEEEEE
Q psy7271 36 WFRLVGRAFVYLSNLMYPIPLIQKVAIV--NEKGDVKGHLKIAVQ 78 (305)
Q Consensus 36 ~~~lIGrA~VyL~nL~y~V~l~~~V~Iv--s~~Gev~G~L~V~V~ 78 (305)
...+||.+.+-|..|. -...+-.++. +.++...|.|+|.+.
T Consensus 102 ~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~~~G~i~l~l~ 144 (148)
T 3kwu_A 102 SDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKSAVSGAIRLHIS 144 (148)
T ss_dssp SSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTCCCCCEEEEEEE
T ss_pred CCccEEEEEEEHHHCc--CCCCEEEEcccCCCCCCCceEEEEEEE
Confidence 4678999999999983 2334445555 344456788888775
No 58
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=44.61 E-value=28 Score=27.52 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=30.1
Q ss_pred ceEEEEeeeEeecccccccCc------ceeeeEEc--CCCCeeEEEEEEEE
Q psy7271 36 WFRLVGRAFVYLSNLMYPIPL------IQKVAIVN--EKGDVKGHLKIAVQ 78 (305)
Q Consensus 36 ~~~lIGrA~VyL~nL~y~V~l------~~~V~Ivs--~~Gev~G~L~V~V~ 78 (305)
...+||.+.+-|+.|.-.-.- ..-.++.. .++...|.|+|.+.
T Consensus 100 ~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~ 150 (153)
T 3b7y_A 100 RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMT 150 (153)
T ss_dssp CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEE
T ss_pred CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEE
Confidence 356899999999998766532 24455544 34567899998875
No 59
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=44.01 E-value=21 Score=30.36 Aligned_cols=43 Identities=7% Similarity=0.221 Sum_probs=35.8
Q ss_pred eEEEEeeeEeecccccccC-cceeeeEEcCCC--CeeEEEEEEEEE
Q psy7271 37 FRLVGRAFVYLSNLMYPIP-LIQKVAIVNEKG--DVKGHLKIAVQI 79 (305)
Q Consensus 37 ~~lIGrA~VyL~nL~y~V~-l~~~V~Ivs~~G--ev~G~L~V~V~p 79 (305)
+.+||+|.|.|.-|+-... +-..+++++-.| +.-|.|++.|.-
T Consensus 103 ~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL 148 (156)
T 2yrb_A 103 YETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRL 148 (156)
T ss_dssp EEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEE
T ss_pred ceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEE
Confidence 6789999999999995544 666899999999 678999988753
No 60
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=41.31 E-value=55 Score=34.49 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=50.2
Q ss_pred eeEEEEEEeeccCCCcccCceEEEEEeCCCCc----cceeeCcccCCCCCCCeeeeEE-EEEE-EeecCCccccccccCC
Q psy7271 158 ELQFRITVLQAVGISTEYSDIFCQFNFLHRHD----EAFSTEPVKNTGKGTPLGFYHI-QNLT-SATAAHAAPLHPHQST 231 (305)
Q Consensus 158 ~~~FrVtIlqAsGLp~~ysdVFCQy~F~~~~e----e~fsTePvknt~~~~~~~F~hv-q~~~-V~VTee~~fl~yl~~~ 231 (305)
..+++|+|+.|.+||..-+|-|++....+.+. .-+.|..+++++- ++.|+-. -.|. |.+ ++ + .
T Consensus 649 ~~~L~V~Visaq~L~~~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~ngl--NPvWNE~~F~F~~v~~-pe---l-----a 717 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTKIIENNGM--DPYYDEKVFVFKKVVL-PD---L-----A 717 (816)
T ss_dssp CEEEEEEEEEEECCCSSCCCEEEEEEEESSGGGCEEEEEECCCBCSCSS--CCBCCCCCEEEEEESC-GG---G-----C
T ss_pred ceEEEEEEEEcccCCCCCCCCeEEEEEeCCCcccccceeeeEEecCCCC--CCeEcCceeEEccccC-CC---c-----c
Confidence 56899999999999988888999999887432 2367888876543 4567653 3343 322 33 2 2
Q ss_pred cEEEEEeecc
Q psy7271 232 SQIYQVWCSP 241 (305)
Q Consensus 232 ~L~fEVwG~~ 241 (305)
.|.|+||=+.
T Consensus 718 ~Lrf~V~D~d 727 (816)
T 3qr0_A 718 VVRIIVSEEN 727 (816)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEecC
Confidence 4789999864
No 61
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=29.00 E-value=10 Score=37.11 Aligned_cols=67 Identities=6% Similarity=0.128 Sum_probs=3.4
Q ss_pred EEEEEeeccCCCcccCceEEEEEeCCCCccceeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEEEEEeec
Q psy7271 161 FRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQIYQVWCS 240 (305)
Q Consensus 161 FrVtIlqAsGLp~~ysdVFCQy~F~~~~ee~fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~fEVwG~ 240 (305)
.+|+|.+|.+|++. .|-||...+.+.. ...|..+++|..|.++.|+.+ |++.+... . ..|.|+||-+
T Consensus 13 L~V~VieAk~L~~~-ddpYv~v~l~~~~--~~kT~v~~kt~~glnP~WnE~--F~f~~~~~------~--~~L~v~V~d~ 79 (483)
T 3bxj_A 13 LKLWIIEARELPPK-KRYYCELCLDDML--YARTTSKPRSASGDTVFWGEH--FEFNNLPA------V--RALRLHLYRD 79 (483)
T ss_dssp C------------------------------------------------CC--EECC-----------------------
T ss_pred EEEEEEEcCCcCCC-CCCeEEEEECCeE--EeeeeEEeCCCCCCCCccccE--EEEecCCC------c--cEEEEEEEec
Confidence 56899999999873 2678887764422 245666666633345678766 44333222 1 4689999984
No 62
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=28.22 E-value=57 Score=25.34 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=28.6
Q ss_pred EEeeeEeecccccccCcceeeeEEcCCCCeeEEEEEEEE
Q psy7271 40 VGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQ 78 (305)
Q Consensus 40 IGrA~VyL~nL~y~V~l~~~V~Ivs~~Gev~G~L~V~V~ 78 (305)
=|+.++-+..=-+...+...+||.+.+|++.|.+-|.+.
T Consensus 86 ~G~~~~~~~~g~~g~~~~~~~PV~~~~g~viGvv~vg~~ 124 (131)
T 1p0z_A 86 NAKSYVSVRKGSLGSSLRGKSPIQDATGKVIGIVSVGYT 124 (131)
T ss_dssp HCCCEEEEEEETTEEEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CCCeEEEEEEccceeeEEEEEeEECCCCCEEEEEEEEEE
Confidence 455555444444566777889999999999999988763
No 63
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=27.83 E-value=43 Score=26.58 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=28.8
Q ss_pred EEeeeEeecccccccCcceeeeEEcCCCCeeEEEEEEEE
Q psy7271 40 VGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQ 78 (305)
Q Consensus 40 IGrA~VyL~nL~y~V~l~~~V~Ivs~~Gev~G~L~V~V~ 78 (305)
=|+.++-+..--+...+.-.+||.+..|++.|.+-|.+.
T Consensus 91 ~G~~~~~~~~~~~g~~~~~~~PV~~~~g~viGvv~vg~~ 129 (142)
T 3by8_A 91 NGEENVAINRGFLAQALRVFTPIYDENHKQIGVVAIGLE 129 (142)
T ss_dssp GTCCEEEEECSSSSCEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCCeEEEEecCccEEEEEEEEeEEcCCCCEEEEEEEeEE
Confidence 455555554445666777889999989999999988763
No 64
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=25.43 E-value=1.1e+02 Score=25.15 Aligned_cols=46 Identities=13% Similarity=0.158 Sum_probs=31.3
Q ss_pred ceEEEEeeeEeecccccccC-----cceeeeEEcC--CCCeeEEEEEEEEEec
Q psy7271 36 WFRLVGRAFVYLSNLMYPIP-----LIQKVAIVNE--KGDVKGHLKIAVQIVT 81 (305)
Q Consensus 36 ~~~lIGrA~VyL~nL~y~V~-----l~~~V~Ivs~--~Gev~G~L~V~V~p~~ 81 (305)
...+||.+.+-|..|.-.-+ +....++... ...+.|.|.|.+.-+.
T Consensus 109 ~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 109 SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 45689999999999874322 1234555554 3457899999887663
No 65
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=24.78 E-value=2.6e+02 Score=29.91 Aligned_cols=74 Identities=9% Similarity=0.204 Sum_probs=49.4
Q ss_pred eEEEEEEeeccCCCcc-cCceEEEEEeCCCCccc---eeeCcccCCCCCCCeeeeEEEEEEEeecCCccccccccCCcEE
Q psy7271 159 LQFRITVLQAVGISTE-YSDIFCQFNFLHRHDEA---FSTEPVKNTGKGTPLGFYHIQNLTSATAAHAAPLHPHQSTSQI 234 (305)
Q Consensus 159 ~~FrVtIlqAsGLp~~-ysdVFCQy~F~~~~ee~---fsTePvknt~~~~~~~F~hvq~~~V~VTee~~fl~yl~~~~L~ 234 (305)
=.|+|+|..+.+++.. .+++|.+-..+|..+.. ..|..+. . .....|+.-=+|.+.+..= . .+..|+
T Consensus 217 ~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~-~--~~~~~Wne~l~f~i~i~dL--P----r~a~L~ 287 (940)
T 2wxf_A 217 QPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVN-V--CSEPVWKQRLEFDISVCDL--P----RMARLC 287 (940)
T ss_dssp SEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEE-S--CSSCEEEEEEEEEEEGGGC--C----TTCEEE
T ss_pred CceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceeccccc-C--CCCcccceEEEcccccccC--C----cccEEE
Confidence 3789999999999974 66788888888876532 3333321 1 1245788876676666553 3 566799
Q ss_pred EEEeecc
Q psy7271 235 YQVWCSP 241 (305)
Q Consensus 235 fEVwG~~ 241 (305)
|.|||..
T Consensus 288 ~ti~~~~ 294 (940)
T 2wxf_A 288 FALYAVV 294 (940)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9999974
No 66
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=21.92 E-value=1e+02 Score=23.74 Aligned_cols=17 Identities=12% Similarity=0.166 Sum_probs=12.8
Q ss_pred eEEEEeeeEeecccccc
Q psy7271 37 FRLVGRAFVYLSNLMYP 53 (305)
Q Consensus 37 ~~lIGrA~VyL~nL~y~ 53 (305)
..+||.+.+-|+.|.-.
T Consensus 92 dd~iG~~~i~l~~l~~~ 108 (136)
T 1gmi_A 92 DDFVANCTIQFEELLQN 108 (136)
T ss_dssp CEEEEEEEEEHHHHTST
T ss_pred CCEEEEEEEEHHHhccc
Confidence 45788888888887653
No 67
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=21.45 E-value=61 Score=23.77 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=15.0
Q ss_pred eeeeEEcCCCCeeEEEE
Q psy7271 58 QKVAIVNEKGDVKGHLK 74 (305)
Q Consensus 58 ~~V~Ivs~~Gev~G~L~ 74 (305)
+.+||++++|++.|.+.
T Consensus 94 ~~l~Vvd~~g~~~Givt 110 (122)
T 3kpb_A 94 SGVPVVDDYRRVVGIVT 110 (122)
T ss_dssp SEEEEECTTCBEEEEEE
T ss_pred CeEEEECCCCCEEEEEe
Confidence 56999999999999875
No 68
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=21.34 E-value=60 Score=26.80 Aligned_cols=17 Identities=12% Similarity=0.176 Sum_probs=12.5
Q ss_pred eEEEEeeeEeecccccc
Q psy7271 37 FRLVGRAFVYLSNLMYP 53 (305)
Q Consensus 37 ~~lIGrA~VyL~nL~y~ 53 (305)
.-+||++.|-|+.|.-.
T Consensus 114 dd~iG~~~i~l~~l~~~ 130 (157)
T 2fk9_A 114 DHFVANCTLQFQELLRT 130 (157)
T ss_dssp CEEEEEEEEEHHHHHHH
T ss_pred CCEEEEEEEEHHHhhcc
Confidence 45788888888877654
No 69
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=21.30 E-value=62 Score=24.29 Aligned_cols=17 Identities=24% Similarity=0.483 Sum_probs=15.0
Q ss_pred eeeeEEcCCCCeeEEEE
Q psy7271 58 QKVAIVNEKGDVKGHLK 74 (305)
Q Consensus 58 ~~V~Ivs~~Gev~G~L~ 74 (305)
+.+||++++|++.|.+.
T Consensus 100 ~~lpVvd~~g~~~Giit 116 (127)
T 3nqr_A 100 HMAIVIDEFGGVSGLVT 116 (127)
T ss_dssp CEEEEECTTSCEEEEEE
T ss_pred eEEEEEeCCCCEEEEEE
Confidence 56999999999999875
No 70
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=20.33 E-value=65 Score=24.45 Aligned_cols=17 Identities=18% Similarity=0.593 Sum_probs=14.9
Q ss_pred eeeeEEcCCCCeeEEEE
Q psy7271 58 QKVAIVNEKGDVKGHLK 74 (305)
Q Consensus 58 ~~V~Ivs~~Gev~G~L~ 74 (305)
+.+||++++|++.|.+.
T Consensus 117 ~~l~Vvd~~g~~~Giit 133 (152)
T 4gqw_A 117 RRLPVVDSDGKLVGIIT 133 (152)
T ss_dssp CEEEEECTTSBEEEEEE
T ss_pred CEEEEECCCCcEEEEEE
Confidence 46999999999999875
No 71
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=20.05 E-value=67 Score=24.04 Aligned_cols=17 Identities=24% Similarity=0.477 Sum_probs=14.7
Q ss_pred eeeeEEcCCCCeeEEEE
Q psy7271 58 QKVAIVNEKGDVKGHLK 74 (305)
Q Consensus 58 ~~V~Ivs~~Gev~G~L~ 74 (305)
..+||++++|++.|.+.
T Consensus 100 ~~lpVvd~~g~~~Giit 116 (128)
T 3gby_A 100 SVVPLADEDGRYEGVVS 116 (128)
T ss_dssp SEEEEECTTCBEEEEEE
T ss_pred cEEEEECCCCCEEEEEE
Confidence 35899999999999875
Done!