Query psy7272
Match_columns 275
No_of_seqs 281 out of 1719
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 22:28:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4egx_A Kinesin-like protein KI 100.0 1.2E-41 4E-46 290.4 18.1 174 18-254 6-184 (184)
2 4ejq_A Kinesin-like protein KI 100.0 2.2E-30 7.7E-35 215.0 14.5 146 46-254 4-154 (154)
3 3bfn_A Kinesin-like protein KI 100.0 2.6E-32 8.9E-37 256.4 -0.1 163 36-221 193-355 (388)
4 1x88_A Kinesin-like protein KI 100.0 1.9E-32 6.5E-37 255.6 -2.4 162 37-221 195-358 (359)
5 2vvg_A Kinesin-2; motor protei 100.0 3.4E-32 1.2E-36 253.0 -0.8 163 36-221 180-343 (350)
6 1goj_A Kinesin, kinesin heavy 100.0 2.9E-31 1E-35 247.2 1.6 162 36-221 176-338 (355)
7 2zfi_A Kinesin-like protein KI 100.0 5.8E-32 2E-36 253.0 -4.0 172 34-222 183-363 (366)
8 1bg2_A Kinesin; motor protein, 100.0 1.8E-31 6.3E-36 246.0 -1.9 138 37-189 173-310 (325)
9 1t5c_A CENP-E protein, centrom 100.0 1.4E-31 4.8E-36 248.9 -2.9 161 36-221 170-336 (349)
10 3b6u_A Kinesin-like protein KI 100.0 1E-31 3.4E-36 251.4 -4.3 163 36-221 196-361 (372)
11 2wbe_C Bipolar kinesin KRP-130 100.0 5.4E-32 1.9E-36 253.6 -6.4 162 37-221 205-369 (373)
12 2nr8_A Kinesin-like protein KI 100.0 6.7E-31 2.3E-35 244.9 0.4 153 36-211 202-356 (358)
13 4a14_A Kinesin, kinesin-like p 100.0 5.8E-31 2E-35 244.5 -0.2 142 37-189 183-331 (344)
14 3cob_A Kinesin heavy chain-lik 100.0 9.3E-32 3.2E-36 251.6 -6.0 161 37-221 175-335 (369)
15 2y65_A Kinesin, kinesin heavy 100.0 1.4E-31 4.9E-36 250.1 -4.7 160 37-220 180-340 (365)
16 3nwn_A Kinesin-like protein KI 100.0 7.7E-31 2.6E-35 244.6 -0.1 153 36-211 203-357 (359)
17 2rep_A Kinesin-like protein KI 100.0 1.9E-30 6.5E-35 243.2 1.7 138 37-189 220-361 (376)
18 3lre_A Kinesin-like protein KI 100.0 4.3E-31 1.5E-35 246.2 -3.0 142 37-189 197-340 (355)
19 1f9v_A Kinesin-like protein KA 100.0 1.4E-31 4.8E-36 248.8 -6.7 137 38-189 187-326 (347)
20 3gbj_A KIF13B protein; kinesin 100.0 1.7E-30 5.8E-35 242.1 -0.2 172 10-189 143-335 (354)
21 2owm_A Nckin3-434, related to 100.0 3.9E-31 1.3E-35 252.6 -4.8 169 34-221 234-421 (443)
22 1ry6_A Internal kinesin; kines 100.0 8.3E-31 2.8E-35 244.5 -3.2 183 10-219 139-337 (360)
23 3dc4_A Kinesin-like protein NO 100.0 4.3E-30 1.5E-34 238.3 1.3 158 11-189 153-320 (344)
24 3t0q_A AGR253WP; kinesin, alph 100.0 2.5E-30 8.6E-35 240.6 -0.5 141 37-189 189-329 (349)
25 2h58_A Kinesin-like protein KI 99.9 3E-30 1E-34 238.3 -2.1 139 36-189 175-313 (330)
26 4etp_A Kinesin-like protein KA 99.9 1E-30 3.6E-35 247.3 -5.5 141 37-189 242-382 (403)
27 2heh_A KIF2C protein; kinesin, 99.9 7.9E-30 2.7E-34 239.5 -3.4 146 37-211 233-380 (387)
28 4h1g_A Maltose binding protein 99.9 4.4E-29 1.5E-33 251.7 -3.4 151 37-211 558-709 (715)
29 1v8k_A Kinesin-like protein KI 99.9 8.9E-29 3.1E-33 233.7 -2.4 133 37-189 253-387 (410)
30 3u06_A Protein claret segregat 99.9 6.8E-28 2.3E-32 228.3 0.9 142 37-197 234-375 (412)
31 3fm8_A Kinesin-like protein KI 99.9 3.7E-25 1.3E-29 176.9 9.8 100 138-244 24-124 (124)
32 1wln_A Afadin; beta sandwich, 99.8 1.2E-19 4.1E-24 144.2 9.6 106 139-248 10-118 (120)
33 3gqs_A Adenylate cyclase-like 99.5 3.3E-14 1.1E-18 110.1 8.7 84 156-246 17-104 (106)
34 1r21_A Antigen KI-67; beta san 99.5 3.8E-14 1.3E-18 113.4 7.4 85 156-247 26-111 (128)
35 2xt9_B Putative signal transdu 99.5 1.8E-13 6E-18 107.6 9.9 82 156-245 24-106 (115)
36 2jqj_A DNA damage response pro 99.5 1.7E-13 5.9E-18 112.7 9.2 83 157-245 31-125 (151)
37 2kb3_A Oxoglutarate dehydrogen 99.5 2.3E-13 8E-18 111.0 9.6 80 156-243 59-139 (143)
38 3po8_A RV0020C protein, putati 99.5 2.3E-13 8E-18 104.2 8.9 79 156-242 16-95 (100)
39 2kfu_A RV1827 PThr 22; FHA dom 99.4 4.8E-13 1.6E-17 111.4 10.1 82 156-245 68-150 (162)
40 1gxc_A CHK2, CDS1, serine/thre 99.4 7.7E-13 2.6E-17 108.6 8.9 81 158-244 43-141 (149)
41 3hx1_A SLR1951 protein; P74513 99.4 1.8E-12 6E-17 104.3 9.7 80 155-241 22-112 (131)
42 1lgp_A Cell cycle checkpoint p 99.4 7.3E-13 2.5E-17 104.0 7.0 83 157-245 18-112 (116)
43 1uht_A Expressed protein; FHA 99.4 9.8E-13 3.4E-17 103.6 7.3 75 159-239 28-107 (118)
44 3oun_A Putative uncharacterize 99.4 1.8E-12 6.1E-17 107.2 8.8 79 155-241 77-156 (157)
45 3va4_A Mediator of DNA damage 99.4 1.8E-12 6E-17 104.5 8.2 82 156-244 38-126 (132)
46 1g6g_A Protein kinase RAD53; b 99.3 4E-12 1.4E-16 101.5 9.0 77 164-246 37-122 (127)
47 4h87_A Kanadaptin; FHA domain 99.3 3.3E-12 1.1E-16 102.6 8.5 73 163-241 41-128 (130)
48 2ff4_A Probable regulatory pro 99.3 5.6E-12 1.9E-16 118.3 11.2 84 155-245 298-382 (388)
49 1g3g_A Protien kinase SPK1; FH 99.3 4.3E-12 1.5E-16 105.8 8.8 78 164-247 65-151 (164)
50 1mzk_A Kinase associated prote 99.3 4.4E-12 1.5E-16 102.8 7.9 79 157-242 21-117 (139)
51 1dmz_A Protein (protein kinase 99.3 4.9E-12 1.7E-16 104.8 8.0 79 157-241 19-122 (158)
52 2jpe_A Nuclear inhibitor of pr 99.3 1.8E-12 6.2E-17 105.2 4.9 82 157-243 48-136 (140)
53 2pie_A E3 ubiquitin-protein li 99.3 1E-11 3.5E-16 100.6 8.5 81 158-244 22-117 (138)
54 2kin_B Kinesin; motor protein, 99.3 8.1E-15 2.8E-19 112.3 -10.2 82 119-220 1-83 (100)
55 2csw_A Ubiquitin ligase protei 99.2 7.3E-12 2.5E-16 102.3 6.3 72 158-235 31-110 (145)
56 1qu5_A Protein kinase SPK1; FH 99.2 5.2E-12 1.8E-16 107.0 5.6 79 157-242 43-145 (182)
57 3els_A PRE-mRNA leakage protei 99.1 8E-11 2.8E-15 97.5 6.4 75 162-236 55-145 (158)
58 3elv_A PRE-mRNA leakage protei 99.1 2.3E-10 8E-15 98.1 7.7 81 157-237 96-193 (205)
59 3kin_B Kinesin heavy chain; mo 98.9 2.4E-12 8.2E-17 101.5 -9.5 78 123-220 1-79 (117)
60 3uv0_A Mutator 2, isoform B; F 98.8 5.7E-09 1.9E-13 79.1 6.2 77 159-244 17-102 (102)
61 4a0e_A YSCD, type III secretio 98.8 9.4E-09 3.2E-13 81.2 7.0 79 159-245 20-99 (123)
62 3huf_A DNA repair and telomere 98.6 5.5E-08 1.9E-12 88.1 7.6 77 158-237 16-106 (325)
63 3kt9_A Aprataxin; FHA domain, 98.3 2.5E-06 8.5E-11 65.3 8.1 74 160-241 19-98 (102)
64 2brf_A Bifunctional polynucleo 98.3 1.2E-06 3.9E-11 67.9 5.6 73 162-243 28-106 (110)
65 3i6u_A CDS1, serine/threonine- 98.2 1.4E-06 4.7E-11 81.7 6.2 82 157-244 22-121 (419)
66 1yj5_C 5' polynucleotide kinas 98.2 4E-06 1.4E-10 67.4 6.9 73 162-243 28-106 (143)
67 1wv3_A Similar to DNA segregat 98.1 4.3E-06 1.5E-10 73.4 5.8 70 162-242 91-167 (238)
68 1ujx_A Polynucleotide kinase 3 97.8 1.1E-05 3.6E-10 63.3 3.5 71 162-241 35-111 (119)
69 2hj1_A Hypothetical protein; s 89.3 0.17 5.7E-06 37.9 2.1 39 208-249 57-95 (97)
70 2q5w_D Molybdopterin convertin 79.5 1.3 4.6E-05 30.7 3.0 23 211-233 48-70 (77)
71 3po0_A Small archaeal modifier 75.8 2 7E-05 30.7 3.1 24 210-233 59-82 (89)
72 2cu3_A Unknown function protei 75.5 2.1 7.1E-05 28.9 2.9 23 211-233 31-57 (64)
73 1fm0_D Molybdopterin convertin 73.3 2.4 8.3E-05 29.6 2.9 23 211-233 52-74 (81)
74 1rws_A Hypothetical protein PF 72.7 1.5 5E-05 30.9 1.6 26 208-233 45-70 (77)
75 1vjk_A Molybdopterin convertin 70.6 2.5 8.6E-05 31.0 2.6 23 211-233 69-91 (98)
76 1ryj_A Unknown; beta/alpha pro 68.3 3.6 0.00012 28.2 2.8 23 211-233 41-63 (70)
77 1f0z_A THis protein; ubiquitin 68.0 2.2 7.4E-05 28.9 1.6 23 211-233 33-59 (66)
78 2k6p_A Uncharacterized protein 66.6 4.1 0.00014 29.3 2.9 25 210-234 26-50 (92)
79 1tyg_B YJBS; alpha beta barrel 64.7 4.6 0.00016 29.3 2.9 25 209-233 52-80 (87)
80 3dwg_C 9.5 kDa culture filtrat 60.8 5.8 0.0002 28.5 2.9 23 211-233 60-86 (93)
81 2l52_A Methanosarcina acetivor 60.0 4.3 0.00015 29.8 2.0 26 208-233 63-92 (99)
82 2kl0_A Putative thiamin biosyn 58.7 6.2 0.00021 27.4 2.6 25 209-233 30-58 (73)
83 2k5p_A THis protein, thiamine- 58.7 5.1 0.00017 28.3 2.1 26 209-234 34-63 (78)
84 1dm9_A Hypothetical 15.5 KD pr 57.6 7.7 0.00026 30.2 3.3 26 209-234 33-58 (133)
85 2g1e_A Hypothetical protein TA 57.5 6.4 0.00022 27.8 2.6 23 211-233 57-83 (90)
86 3hvz_A Uncharacterized protein 57.2 7 0.00024 27.6 2.7 22 212-233 44-65 (78)
87 3rpf_C Molybdopterin convertin 56.7 8.1 0.00028 26.5 2.9 25 209-233 42-67 (74)
88 1p9k_A ORF, hypothetical prote 55.9 5.1 0.00018 28.0 1.8 28 210-237 46-74 (79)
89 1ksk_A Ribosomal small subunit 50.2 15 0.0005 31.0 4.1 38 209-246 27-73 (234)
90 2qjl_A URM1, ubiquitin-related 46.9 13 0.00045 27.0 2.9 23 211-233 66-92 (99)
91 1v8c_A MOAD related protein; r 46.1 13 0.00043 30.2 2.9 24 210-233 53-80 (168)
92 3bbn_D Ribosomal protein S4; s 46.0 21 0.00072 29.8 4.3 26 209-234 113-139 (201)
93 2l32_A Small archaeal modifier 43.4 12 0.0004 26.1 2.0 24 209-233 36-59 (74)
94 3mml_A Allophanate hydrolase s 43.2 60 0.002 29.1 7.1 60 166-236 46-109 (318)
95 3dh3_A Ribosomal large subunit 42.9 19 0.00065 31.8 3.7 38 209-246 30-77 (290)
96 2k9x_A Tburm1, uncharacterized 42.7 12 0.00043 28.1 2.2 23 211-233 69-95 (110)
97 1vio_A Ribosomal small subunit 42.1 23 0.00078 30.0 4.1 38 209-246 26-72 (243)
98 2kmm_A Guanosine-3',5'-BIS(dip 37.1 21 0.00071 23.9 2.5 22 212-233 39-60 (73)
99 1c05_A Ribosomal protein S4 de 36.2 25 0.00085 28.1 3.2 26 209-234 75-101 (159)
100 3r8n_D 30S ribosomal protein S 35.2 6.3 0.00021 33.2 -0.6 26 209-234 119-145 (205)
101 1wgk_A Riken cDNA 2900073H19 p 35.0 16 0.00054 27.7 1.6 23 211-233 75-101 (114)
102 1nh2_B Transcription initiatio 34.7 22 0.00075 23.2 2.1 20 30-49 31-50 (53)
103 4h22_A Leucine-rich repeat fli 31.7 1.1E+02 0.0038 22.7 5.7 35 18-52 31-65 (103)
104 2vqe_D 30S ribosomal protein S 30.5 33 0.0011 28.7 3.1 26 209-234 123-149 (209)
105 2eki_A DRG 1, developmentally- 30.1 17 0.00057 26.7 1.0 23 212-234 63-85 (93)
106 1orj_A Flagellar protein FLIS; 28.7 59 0.002 25.0 4.1 24 23-46 100-123 (130)
107 1nvp_B Transcription initiatio 28.0 30 0.001 22.9 1.9 20 30-49 35-54 (57)
108 1vh6_A Flagellar protein FLIS; 24.9 48 0.0016 26.1 2.9 26 23-48 100-125 (145)
109 3oep_A Putative uncharacterize 24.4 1.1E+02 0.0038 29.0 5.8 27 209-235 297-325 (494)
110 3u7z_A Putative metal binding 20.5 65 0.0022 23.8 2.7 21 213-233 72-95 (101)
No 1
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=290.38 Aligned_cols=174 Identities=63% Similarity=1.073 Sum_probs=157.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEE
Q psy7272 18 IAEEAVDQLQASEKLIAELNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISL 97 (275)
Q Consensus 18 ~~~~~~~~L~e~E~L~~el~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~l 97 (275)
.+||+.++|+++|+||++|+++|||+|+.+++++++|..++.+||++...+.....|+..+.
T Consensus 6 ~~ee~~e~L~~~e~l~~el~~tWeeKl~~te~~~~e~~~~l~~~gi~~~~~~~~~gv~~~~~------------------ 67 (184)
T 4egx_A 6 FSEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKK------------------ 67 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEETTTEEEEEECCSS------------------
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCcchhhcccccceecCCC------------------
Confidence 47999999999999999999999999999999999999999999999887777777765222
Q ss_pred eeccCcccccccCccccccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCC
Q psy7272 98 VDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQE 177 (275)
Q Consensus 98 vDLAGSEr~~~~~~~~~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~ 177 (275)
.||++||++||..+..++|+|+++.++||+.++...
T Consensus 68 ------------------------------------------~PhLvnLn~Dp~ls~~l~y~L~~g~t~VGr~~~~~~-- 103 (184)
T 4egx_A 68 ------------------------------------------TPHLVNLNEDPLMSECLLYYIKDGITRVGREDGERR-- 103 (184)
T ss_dssp ------------------------------------------SCEEEECCCCTTCSSCSEEECCSEEEEEECSSSSSC--
T ss_pred ------------------------------------------CceEEeccCCcccCceEEEEECCCcCcCCCCCcCCC--
Confidence 799999999999999999999999999999876555
Q ss_pred cceeeecCCcccccceEEEEe-----CCEEEEEeCCCCceEECCeeeccceecCCCCEEEeCCceEEEEeCCchhhhhhh
Q psy7272 178 SQDIQLSGSHIKTEHCTFENV-----EGVVTLIPFQEALCYVNGRQISEPTVLNTGSRVILGKNHVFRFNHPDQVRVHRE 252 (275)
Q Consensus 178 ~~dI~L~~~~Is~~Hc~I~~~-----e~~vtL~~~s~a~t~VNG~~I~~~~~L~~GDrI~lG~~~~f~f~~P~~a~~~r~ 252 (275)
+||.|.|++|++.||.|.+. ++.++|.|.++|.|||||.+|.+++.|+|||||.||++|+|||++|.+|+.+|+
T Consensus 104 -~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~~~a~t~VNG~~I~~~~~L~~GDrI~lG~~h~Frfn~P~ea~~~r~ 182 (184)
T 4egx_A 104 -QDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERE 182 (184)
T ss_dssp -CSEECCSTTCCSEEEEEEEECCSSCSCEEEEEECTTCCEEETTEECCSCEECCTTCEEEETTTEEEEEECHHHHHHC--
T ss_pred -CeEEECccccccccEEEEEcCCCCceEEEEEeeCCCCeEEEcCEEccccEEcCCCCEEEECCCCEEEECChHHHHHhhc
Confidence 89999999999999999985 467999999999999999999999999999999999999999999999999998
Q ss_pred cc
Q psy7272 253 NK 254 (275)
Q Consensus 253 ~~ 254 (275)
++
T Consensus 183 ~s 184 (184)
T 4egx_A 183 RT 184 (184)
T ss_dssp --
T ss_pred CC
Confidence 74
No 2
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.97 E-value=2.2e-30 Score=214.96 Aligned_cols=146 Identities=62% Similarity=1.046 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCccccccccccccccc
Q psy7272 46 RTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKS 125 (275)
Q Consensus 46 ~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~~E~~~IN~S 125 (275)
.+|+++++|+.++.+||++.+++.....|+..+.
T Consensus 4 ~te~i~~ere~~l~e~gi~~~~~g~~~gv~~~~~---------------------------------------------- 37 (154)
T 4ejq_A 4 FTEAIRMEREALLAEMGVAMREDGGTLGVFSPKK---------------------------------------------- 37 (154)
T ss_dssp HHHHHHHHHHHHHHHTTEEECTTSSEEEECCCSS----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCeEeccCceeeeecCCC----------------------------------------------
Confidence 5788889999999999999887777777765322
Q ss_pred hhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeC-----C
Q psy7272 126 LTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVE-----G 200 (275)
Q Consensus 126 L~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e-----~ 200 (275)
.||++||++||+++..++|+|+++.++|||...... +||+|.+++|+++||.|.+.+ +
T Consensus 38 --------------~PhLvnLn~Dp~ls~~lvy~L~~g~t~IGR~~~~~~---~DI~L~~~~Vs~~H~~i~~~~~~~~~~ 100 (154)
T 4ejq_A 38 --------------TPHLVNLNEDPLMSECLLYYIKDGITRVGREDGERR---QDIVLSGHFIKEEHCVFRSDSRGGSEA 100 (154)
T ss_dssp --------------SCEEEECCCCTTCSSEEEEECCSEEEEEECSSCSSC---CSEECCCTTCCSEEEEEEEECTTSSSC
T ss_pred --------------CceEEEecCCcccCceEEEEeCCCCEEEcCCCCCCC---CCEEECCCCcccccEEEEEecCCCcee
Confidence 799999999999999999999999999999875444 999999999999999999864 3
Q ss_pred EEEEEeCCCCceEECCeeeccceecCCCCEEEeCCceEEEEeCCchhhhhhhcc
Q psy7272 201 VVTLIPFQEALCYVNGRQISEPTVLNTGSRVILGKNHVFRFNHPDQVRVHRENK 254 (275)
Q Consensus 201 ~vtL~~~s~a~t~VNG~~I~~~~~L~~GDrI~lG~~~~f~f~~P~~a~~~r~~~ 254 (275)
.+++.+.+.|+|||||.+|.+++.|++||+|.||.+++|+|++|.+|+.+|+++
T Consensus 101 ~~~~d~~S~ngt~VNG~~i~~~~~L~~GD~I~~G~~~~Frf~~P~~a~~~rerS 154 (154)
T 4ejq_A 101 VVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERT 154 (154)
T ss_dssp EEEEEECTTCCEEETTEECCSCEECCTTCEEEETTTEEEEEECHHHHHHHHTCC
T ss_pred EEEEecCCCCceEECCEEcCCceECCCCCEEEECCcEEEEEcChHHhhhhccCC
Confidence 677888899999999999999999999999999999999999999999999874
No 3
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.6e-32 Score=256.40 Aligned_cols=163 Identities=26% Similarity=0.281 Sum_probs=110.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCccccc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTR 115 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~ 115 (275)
...+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+.............|+|+|||||||||..++++.|.|
T Consensus 193 ~V~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~If~i~v~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~r 269 (388)
T 3bfn_A 193 PISSFADFERHFLPASRNRTVGATRLN---QRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLR 269 (388)
T ss_dssp ECCSHHHHHHHHHHHTC--------------CGGGSEEEEEEEEEEEESSTTCCEEEEEEEEEECCCTTC----------
T ss_pred EeCCHHHHHHHHHHHhhccccccccCC---CCCCCCeEEEEEEEEEeccCCCCceeEEEEEEEECCCCcccccccCccch
Confidence 345778888888899999999999998 55999999999987655444444567899999999999999999999999
Q ss_pred cccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEE
Q psy7272 116 LKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTF 195 (275)
Q Consensus 116 ~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I 195 (275)
++|+.+||+||++||+||.||+++.+|+ |||+|+||++|+++++ |++.+.|+ ++|.+....+.
T Consensus 270 lkE~~~INkSL~aLg~vI~aL~~~~~hV------PYRdSkLTrlLqdsLg--GnskT~mI---a~iSP~~~~~~------ 332 (388)
T 3bfn_A 270 LKESGAINTSLFVLGKVVDALNQGLPRV------PYRDSKLTRLLQDSLG--GSAHSILI---ANIAPERRFYL------ 332 (388)
T ss_dssp ----CCCCHHHHHHHHHHHHHHTTCSCC------CGGGSHHHHHTTTSSS--TTCEEEEE---EEECCSGGGHH------
T ss_pred hHHHhHhhhhHHHHHHHHHHHhcCCCCC------cCcccHHHHHHHHhhC--CCccEEEE---EEECCccccHH------
Confidence 9999999999999999999999988877 9999999999999988 99888666 66666554444
Q ss_pred EEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 196 ENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 196 ~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
++..||+++++++.+.|...+++
T Consensus 333 ---ETlsTLrfA~rak~I~n~p~~n~ 355 (388)
T 3bfn_A 333 ---DTVSALNFAARSKEVINRPFTNE 355 (388)
T ss_dssp ---HHHHHHHHHCSEEEEC-------
T ss_pred ---HHHHHHHHHHHHhhCcCcCcccC
Confidence 67778899999998888877765
No 4
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=99.96 E-value=1.9e-32 Score=255.64 Aligned_cols=162 Identities=29% Similarity=0.380 Sum_probs=119.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeee--cCCCCcceeEeeeEEeeccCcccccccCcccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVD--DMTDLTTEKVSKISLVDLAGSERADSTGAKGT 114 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~--~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~ 114 (275)
..+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+... ...+....+.|+|+|||||||||..++++.|+
T Consensus 195 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~ 271 (359)
T 1x88_A 195 VHNKDEVYQILEKGAAKRTTAATLMN---AYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDK 271 (359)
T ss_dssp ECSGGGHHHHHHHHHHHHHHHHHHST---THHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC---------
T ss_pred cCCHHHHHHHHHHHHhhcccccccCC---CCCCCccEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCCcccccCCccc
Confidence 45678889999999999999999998 55999999999876443 23344456789999999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceE
Q psy7272 115 RLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCT 194 (275)
Q Consensus 115 ~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~ 194 (275)
|++|+.+||+||++||+||.||+++.+|+ |||+|+||++|+++++ |++.+.|+ ++|.+....+.
T Consensus 272 rl~E~~~INkSL~aLg~vI~aL~~~~~hv------PyRdSkLT~lLqdsLg--Gnskt~mI---a~vsP~~~~~~----- 335 (359)
T 1x88_A 272 RAREAGNINQSLLTLGRVITALVERTPHV------PYRESKLTRILQDSLG--GRTRTSII---ATISPASLNLE----- 335 (359)
T ss_dssp ------CCCHHHHHHHHHHHHHHTTCSCC------CGGGSHHHHHTGGGSS--SSSEEEEE---EEECCCGGGHH-----
T ss_pred chHHHhhhhHHHHHHHHHHHHHhcCCCCC------ccccchHHHHHHHHhC--CCCeEEEE---EEECCCcccHH-----
Confidence 99999999999999999999999988887 9999999999999988 99888666 66666555444
Q ss_pred EEEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 195 FENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 195 I~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
++..||+++++|+.+.|...|++
T Consensus 336 ----ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 336 ----ETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp ----HHHHHHHHHHHHTTCCCCCC---
T ss_pred ----HHHHHHHHHHHHhhccCcceeCC
Confidence 66668888888877777766653
No 5
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=99.96 E-value=3.4e-32 Score=253.02 Aligned_cols=163 Identities=29% Similarity=0.363 Sum_probs=113.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecC-CCCcceeEeeeEEeeccCcccccccCcccc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDM-TDLTTEKVSKISLVDLAGSERADSTGAKGT 114 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~-~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~ 114 (275)
...+++|.++.+..+.++|.++.|.|| .+|||||+||+|.+..... .+....+.|+|+|||||||||..+++++|+
T Consensus 180 ~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~ 256 (350)
T 2vvg_A 180 RVTTAAELSALMDKGFANRHVAATQMN---DTSSRSHSIFMVRIECSEVIENKEVIRVGKLNLVDLAGSERQSKTGATGE 256 (350)
T ss_dssp EESSHHHHHHHHHHHHHHC-------------CTTCEEEEEEEEEEEEC----CEEEEEEEEEEECCCCCC---------
T ss_pred EcCCHHHHHHHHHHHHhccccccccCC---CCCCcceEEEEEEEEEeeccCCCccEEEEEEEEEeCCCCCccccccccHH
Confidence 345788999999999999999999998 5699999999997655433 334456789999999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceE
Q psy7272 115 RLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCT 194 (275)
Q Consensus 115 ~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~ 194 (275)
|++|+++||+||++||+||.||++++.|+ |||+|+||++|+++++ |++.+.++ ++|.+....+.
T Consensus 257 rl~E~~~IN~SL~aLg~vI~aL~~~~~hv------PyRdSkLT~lLqdsLg--Gnskt~mI---~~isP~~~~~~----- 320 (350)
T 2vvg_A 257 TLVEGAKINLSLSALGLVISKLVEGATHI------PYRDSKLTRLLQDSLG--GNSKTLMC---ANISPASTNYD----- 320 (350)
T ss_dssp ------CTTHHHHHHHHHHHHHHHTCSSC------CGGGCHHHHHTTTTTT--SSSEEEEE---EEECCBGGGHH-----
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHcCCCCC------CccccHHHHHHHHhcC--CCccEEEE---EEeCCccccHH-----
Confidence 99999999999999999999999988777 9999999999999988 99887666 66666554444
Q ss_pred EEEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 195 FENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 195 I~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
++..||+++++++.+.|...+++
T Consensus 321 ----ETl~TL~fA~rak~i~n~~~~n~ 343 (350)
T 2vvg_A 321 ----ETMSTLRYADRAKQIKNKPRINE 343 (350)
T ss_dssp ----HHHHHHHHHHHHTTCBCCCCCCB
T ss_pred ----HHHHHHHHHHHHhhccccceecC
Confidence 66668888888888888777764
No 6
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=99.96 E-value=2.9e-31 Score=247.22 Aligned_cols=162 Identities=26% Similarity=0.318 Sum_probs=135.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCccccc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTR 115 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~ 115 (275)
...+++|.++.+..+.++|.++.|.|| .+|||||+||+|.+...... ....+.|+|+|||||||||..+++++|++
T Consensus 176 ~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~skL~lVDLAGSEr~~~t~~~g~r 251 (355)
T 1goj_A 176 YVSSVQEVYEVMRRGGNARAVAATNMN---QESSRSHSIFVITITQKNVE-TGSAKSGQLFLVDLAGSEKVGKTGASGQT 251 (355)
T ss_dssp ECCSHHHHHHHHHHHHHHHHHHHHHTT---CCGGGCEEEEEEEEEEEETT-TTEEEEEEEEEEECCCCSCCTTSSSCCCC
T ss_pred eCCCHHHHHHHHHHHHhhcCcccccCC---CCCCCceEEEEEEEEEeccC-CCceeeeEEEEEECCCCCcccccccchhh
Confidence 345788999999999999999999998 55999999999987654433 34567899999999999999999999999
Q ss_pred cccccccccchhhHHHHHHHhhhcc-cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceE
Q psy7272 116 LKEGANINKSLTTLGKVISALAEIT-PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCT 194 (275)
Q Consensus 116 ~~E~~~IN~SL~~Lg~vi~al~~~~-~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~ 194 (275)
++|+++||+||++||+||.||++++ .|+ |||+|+||++|+++++ |++.+.++ ++|.+......
T Consensus 252 l~E~~~IN~SL~aLg~vI~aL~~~~~~hv------PyRdSkLT~lLqdsLg--Gns~t~mI---~~isP~~~~~~----- 315 (355)
T 1goj_A 252 LEEAKKINKSLSALGMVINALTDGKSSHV------PYRDSKLTRILQESLG--GNSRTTLI---INCSPSSYNDA----- 315 (355)
T ss_dssp TTTTGGGTSHHHHHHHHHHHHHHCSCSCC------CGGGCHHHHHTGGGTT--SSCEEEEE---EEECCBGGGHH-----
T ss_pred HHHHHhhhhHHHHHHHHHHHHhcCCCCCC------CCccCHHHHHHHHHhC--CCCcEEEE---EEECcccccHH-----
Confidence 9999999999999999999999864 565 9999999999999988 98877666 56655444433
Q ss_pred EEEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 195 FENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 195 I~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
++..||+++++++.+.|...+++
T Consensus 316 ----ETl~TL~fA~rak~I~n~~~vn~ 338 (355)
T 1goj_A 316 ----ETLSTLRFGMRAKSIKNKAKVNA 338 (355)
T ss_dssp ----HHHHHHHHHHHHHTCBCCCCCCS
T ss_pred ----HHHHHHHHHHHHhhccCCceeCC
Confidence 66678888888888888777764
No 7
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=99.96 E-value=5.8e-32 Score=252.97 Aligned_cols=172 Identities=37% Similarity=0.438 Sum_probs=123.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecC---CCCcceeEeeeEEeeccCcccccccC
Q psy7272 34 AELNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDM---TDLTTEKVSKISLVDLAGSERADSTG 110 (275)
Q Consensus 34 ~el~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~---~~~~~~~~s~l~lvDLAGSEr~~~~~ 110 (275)
+....+++|.++.+..+.++|.++.|.|| .+|||||+||+|.+..... .+....+.|+|+|||||||||..+++
T Consensus 183 ~~~V~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~ 259 (366)
T 2zfi_A 183 KLAVTSYNDIQDLMDSGNKPRTVAATNMN---ETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTG 259 (366)
T ss_dssp CEECCSHHHHHHHHHHHHHHHTSGGGGTT---THHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC----
T ss_pred EEEECCHHHHHHHHHHHhhccccccccCC---CCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCCCccccccC
Confidence 33456789999999999999999999998 5599999999987644322 23345678999999999999999999
Q ss_pred ccccccccccccccchhhHHHHHHHhhhcccC------CcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeec
Q psy7272 111 AKGTRLKEGANINKSLTTLGKVISALAEITPH------LVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLS 184 (275)
Q Consensus 111 ~~~~~~~E~~~IN~SL~~Lg~vi~al~~~~~~------l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~ 184 (275)
++|+|++|+.+||+||++||+||.||++.... .....++|||+|+||++|++.++ |++.+.++ ++|.+.
T Consensus 260 ~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLg--Gnskt~mI---a~isP~ 334 (366)
T 2zfi_A 260 AKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLG--GNSRTAMV---AALSPA 334 (366)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSS--TTCEEEEE---EEECCB
T ss_pred CCccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhC--CCceEEEE---EEeCCC
Confidence 99999999999999999999999999985310 01123459999999999999988 99888666 666665
Q ss_pred CCcccccceEEEEeCCEEEEEeCCCCceEECCeeeccc
Q psy7272 185 GSHIKTEHCTFENVEGVVTLIPFQEALCYVNGRQISEP 222 (275)
Q Consensus 185 ~~~Is~~Hc~I~~~e~~vtL~~~s~a~t~VNG~~I~~~ 222 (275)
...+. ++..||+++++|+.+.|...+..+
T Consensus 335 ~~~~~---------ETlsTLrfA~rak~I~~~~~~~~~ 363 (366)
T 2zfi_A 335 DINYD---------ETLSTLRYADRAKQIRNTVSVNHH 363 (366)
T ss_dssp GGGHH---------HHHHHHHHHHHTC-----------
T ss_pred cccHH---------HHHHHHHHHHHHhhccCCCCCCCC
Confidence 55544 667788889889888887777543
No 8
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=99.96 E-value=1.8e-31 Score=245.96 Aligned_cols=138 Identities=28% Similarity=0.375 Sum_probs=118.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCcccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRL 116 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~ 116 (275)
..+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+...... ......|+|+|||||||||..++++.|.|+
T Consensus 173 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~skl~lVDLAGSEr~~~t~~~g~rl 248 (325)
T 1bg2_A 173 VCSPDEVMDTIDEGKSNRHVAVTNMN---EHSSRSHSIFLINVKQENTQ-TEQKLSGKLYLVDLAGSEKVSKTGAEGAVL 248 (325)
T ss_dssp ECSHHHHHHHHHHHHHHTTTTCSCHH---HHHHHSEEEEEEEEEEEETT-TCCEEEEEEEEEECCCSCCCCCCSSSCTTS
T ss_pred CCCHHHHHHHHHHHHhhCceeecCCC---CCCCCCeEEEEEEEEEEecC-CCcEEEEEEEEEECCCCCcccccCCccccc
Confidence 35788999999999999999999998 55999999999987654433 344678999999999999999999999999
Q ss_pred ccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 117 KEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 117 ~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
+|+.+||+||++||+||.||+++..|+ |||+|+||++||+.++ |++.+.++ ++|.+......
T Consensus 249 ~E~~~IN~SL~aLg~vI~aL~~~~~hv------PyRdSkLT~lLqdsLg--Gns~t~mi---a~vsP~~~~~~ 310 (325)
T 1bg2_A 249 DEAKNINKSLSALGNVISALAEGSTYV------PYRDSKMTRILQDSLG--GNCRTTIV---ICCSPSSYNES 310 (325)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTCSCC------CGGGSHHHHHGGGTSS--SSCEEEEE---EEECCBGGGHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCC------cccccHHHHHHHHHhC--CCCcEEEE---EEECCccccHH
Confidence 999999999999999999999987777 9999999999999988 99887666 66665554443
No 9
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=99.96 E-value=1.4e-31 Score=248.87 Aligned_cols=161 Identities=30% Similarity=0.315 Sum_probs=126.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCC----CcceeEeeeEEeeccCcccccccCc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTD----LTTEKVSKISLVDLAGSERADSTGA 111 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~----~~~~~~s~l~lvDLAGSEr~~~~~~ 111 (275)
...+++|.++.+..+.++|.++.|.|| .+|||||+||++.+....... ....+.|+|+|||||||||..++++
T Consensus 170 ~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~ 246 (349)
T 1t5c_A 170 VVYTSEMALKWITKGEKSRHYGETKMN---QRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGA 246 (349)
T ss_dssp ECSSHHHHHHHHHHHHHTTSSSSSSSS---CTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC----
T ss_pred EeCCHHHHHHHHHHhhcccccccccCC---CCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCC
Confidence 345788999999999999999999998 569999999998765443321 2346789999999999999999999
Q ss_pred cccccccccccccchhhHHHHHHHhhhcc--cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 112 KGTRLKEGANINKSLTTLGKVISALAEIT--PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 112 ~~~~~~E~~~IN~SL~~Lg~vi~al~~~~--~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
.|.|++|+++||+||++||+||.||++++ .|+ |||+|+||++||++++ |++.+.++ ++|.+.
T Consensus 247 ~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hv------PyRdSkLT~lLqdsLg--Gnskt~mI---~~isP~----- 310 (349)
T 1t5c_A 247 AGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFI------NYRDSKLTRILQNSLG--GNAKTRII---CTITPV----- 310 (349)
T ss_dssp ---CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSS------CGGGSHHHHHTGGGTT--SSSEEEEE---EEECTT-----
T ss_pred ccccchhhhHHhHHHHHHHHHHHHHhccCCCCCC------cccccHHHHHHHHhcC--CCceEEEE---EEeCCC-----
Confidence 99999999999999999999999999865 355 9999999999999988 98877655 555432
Q ss_pred ccceEEEEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 190 TEHCTFENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 190 ~~Hc~I~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
+ +.++..||+++++|+.+.|...+++
T Consensus 311 --~----~~ETlsTL~fA~rak~I~n~~~vn~ 336 (349)
T 1t5c_A 311 --S----FDETLTALQFASTAKYMKNTPYVNE 336 (349)
T ss_dssp --C----SHHHHHHHHHHHHHTTCCCCCCCCE
T ss_pred --C----HHHHHHHHHHHHHHhhcccCceecc
Confidence 1 3478889999988888888877764
No 10
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=99.96 E-value=1e-31 Score=251.45 Aligned_cols=163 Identities=28% Similarity=0.383 Sum_probs=124.8
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecC--CCCcceeEeeeEEeeccCcccccccCccc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDM--TDLTTEKVSKISLVDLAGSERADSTGAKG 113 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~--~~~~~~~~s~l~lvDLAGSEr~~~~~~~~ 113 (275)
...+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+..... .+....+.|+|+|||||||||..++++.|
T Consensus 196 ~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g 272 (372)
T 3b6u_A 196 VTKSVKEIEHVMNVGNQNRSVGATNMN---EHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQG 272 (372)
T ss_dssp ECCSHHHHHHHHHHHHHHHTTTCSSHH---HHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEEECCCCCE--------
T ss_pred EecCHHHHHHHHHHHHHhcCcccccCC---CCCCcceEEEEEEEEEeecCCCCCcceEEEEEEEEECCCCccccccCcch
Confidence 345788999999999999999999998 5599999999997655432 33456778999999999999999999999
Q ss_pred cccccccccccchhhHHHHHHHhhhcc-cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccc
Q psy7272 114 TRLKEGANINKSLTTLGKVISALAEIT-PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEH 192 (275)
Q Consensus 114 ~~~~E~~~IN~SL~~Lg~vi~al~~~~-~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~H 192 (275)
+|++|+.+||+||++||+||.||++++ .|+ |||+|+||++|+++++ |++.+.++ ++|.+....+.
T Consensus 273 ~rl~E~~~INkSL~aLg~vI~aL~~~~~~hv------PyRdSkLT~lLqdsLg--Gnskt~mI---a~vsP~~~~~~--- 338 (372)
T 3b6u_A 273 ERLKEATKINLSLSALGNVISALVDGKSTHI------PYRDSKLTRLLQDSLG--GNAKTVMV---ANVGPASYNVE--- 338 (372)
T ss_dssp --EEEGGGCCHHHHHHHHHHHHHHCC---CC------CGGGSHHHHHTTTTTT--SSSEEEEE---EEECCBGGGHH---
T ss_pred hhhhhHhhhhhhHHHHHHHHHHHhcCCCCCC------cccccHHHHHHHHhcC--CCccEEEE---EEeCCcccCHH---
Confidence 999999999999999999999999864 465 9999999999999998 99888766 66666555544
Q ss_pred eEEEEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 193 CTFENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 193 c~I~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
++..||+++++++.+.|...+++
T Consensus 339 ------ETlsTLrfA~rak~I~n~~~~n~ 361 (372)
T 3b6u_A 339 ------ETLTTLRYANRAKNIKNKPRVNE 361 (372)
T ss_dssp ------HHHHHHHHHHHHTTCBCCCCCCC
T ss_pred ------HHHHHHHHHHHHhhccccceecC
Confidence 66668888888887777777764
No 11
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=99.96 E-value=5.4e-32 Score=253.65 Aligned_cols=162 Identities=28% Similarity=0.391 Sum_probs=117.8
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecC--CCCcceeEeeeEEeeccCcccccccCcc-c
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDM--TDLTTEKVSKISLVDLAGSERADSTGAK-G 113 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~--~~~~~~~~s~l~lvDLAGSEr~~~~~~~-~ 113 (275)
..+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+..... .+....+.|+|+|||||||||..++++. |
T Consensus 205 V~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g 281 (373)
T 2wbe_C 205 VHSKDDVYKLLEKGKERRKTATTLMN---AQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKG 281 (373)
T ss_dssp ESSHHHHHHHHHHHHHHHTTTCSCHH---HHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC-----------
T ss_pred cCCHHHHHHHHHHHhhhhccccccCC---CCCCCccEEEEEEEEEecCCCCCCcceeEEEEEEEECCCCCccccccCccc
Confidence 45678888888999999999999998 5599999999997654432 3344567899999999999999999997 9
Q ss_pred cccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccce
Q psy7272 114 TRLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHC 193 (275)
Q Consensus 114 ~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc 193 (275)
.|++|+.+||+||++||+||.||+++.+|+ |||+|+||++|+++++ |++.+.++ ++|.+....+.
T Consensus 282 ~rl~E~~~INkSL~aLg~vI~aL~~~~~hv------PyRdSkLT~lLqdsLg--Gnskt~mI---a~isP~~~~~~---- 346 (373)
T 2wbe_C 282 IRVRETVNINQSLLTLGRVITALVDRAPHV------PYRESKLTRLLQESLG--GRTKTSII---ATISPGHKDIE---- 346 (373)
T ss_dssp ---------CHHHHHHHHHHHHHHHCSSCC------CGGGCHHHHHTHHHHH--SSSEEEEE---EEECCBGGGHH----
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCcC------ccccchHHHHHHHHhC--CCceEEEE---EEeCCCcccHH----
Confidence 999999999999999999999999988887 9999999999999998 99888666 66666555544
Q ss_pred EEEEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 194 TFENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 194 ~I~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
++..||+++++++.+.|...|++
T Consensus 347 -----ETlsTLrfA~rak~I~n~p~vN~ 369 (373)
T 2wbe_C 347 -----ETLSTLEYAHRAKNIQNKPEVNQ 369 (373)
T ss_dssp -----HHHHHHHHHHHHHTCEECCCCCE
T ss_pred -----HHHHHHHHHHHHhhccccceecc
Confidence 66668888888887777766654
No 12
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=99.96 E-value=6.7e-31 Score=244.94 Aligned_cols=153 Identities=29% Similarity=0.311 Sum_probs=105.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCC-CCcceeEeeeEEeeccCcccccccCcccc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMT-DLTTEKVSKISLVDLAGSERADSTGAKGT 114 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~-~~~~~~~s~l~lvDLAGSEr~~~~~~~~~ 114 (275)
...+++|.+..+..+.++|.++.|.|| ..|||||+||+|.+...... .......|+|+|||||||||..++++.|+
T Consensus 202 ~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~If~i~v~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~ 278 (358)
T 2nr8_A 202 LTSQEEDAFSLLFEGETNRIIASHTMN---KNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQ 278 (358)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHHHHHT---CCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------
T ss_pred EcCCHHHHHHHHHHHHhccccccccCC---CCCCcCeEEEEEEEEEEeccCCCCCEEEEEEEEEECCCCCcccccCCchh
Confidence 345688999999999999999999998 55999999999977554322 23345679999999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHhhhcc-cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccce
Q psy7272 115 RLKEGANINKSLTTLGKVISALAEIT-PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHC 193 (275)
Q Consensus 115 ~~~E~~~IN~SL~~Lg~vi~al~~~~-~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc 193 (275)
|++|+.+||+||++||+||.||++++ .|+ |||+|+||++||++++ |++.+.++ ++|.+....+.
T Consensus 279 rl~E~~~INkSL~aLg~vI~aL~~~~~~hi------PyRdSkLT~LLqdsLg--Gnskt~mI---a~isP~~~~~~---- 343 (358)
T 2nr8_A 279 VLKEATYINKSLSFLEQAIIALGDQKRDHI------PFRQCKLTHALKDSLG--GNCNMVLV---TNIYGEAAQLE---- 343 (358)
T ss_dssp ------CCSTHHHHHHHHHHHHHC-----C------CGGGSHHHHHTHHHHS--SSSEEEEE---EEECCSGGGHH----
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCCcC------CCccCHHHHHHHHhcC--CCCeEEEE---EEeCCchhhHH----
Confidence 99999999999999999999999754 466 9999999999999988 99888666 66666555444
Q ss_pred EEEEeCCEEEEEeCCCCc
Q psy7272 194 TFENVEGVVTLIPFQEAL 211 (275)
Q Consensus 194 ~I~~~e~~vtL~~~s~a~ 211 (275)
++..||+++++++
T Consensus 344 -----ETlsTLrfA~Rak 356 (358)
T 2nr8_A 344 -----ETLSSLRFASRMK 356 (358)
T ss_dssp -----HHHHHHHHHTTGG
T ss_pred -----HHHHHHHHHHHhc
Confidence 4444555555543
No 13
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=99.96 E-value=5.8e-31 Score=244.50 Aligned_cols=142 Identities=30% Similarity=0.323 Sum_probs=96.5
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCC-------CCcceeEeeeEEeeccCccccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMT-------DLTTEKVSKISLVDLAGSERADST 109 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~-------~~~~~~~s~l~lvDLAGSEr~~~~ 109 (275)
..+++|.++.+..+.++|.++.|.|| ..|||||+||+|.+...... .......|+|+|||||||||..++
T Consensus 183 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t 259 (344)
T 4a14_A 183 VEGLDEVLSLLEMGNAARHTGATHLN---HLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKT 259 (344)
T ss_dssp CCSHHHHHHHHHHHHHHHHC---------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC---
T ss_pred ccCHHHHHHHHHhcchhcccCcchhh---hcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhccc
Confidence 45788899999999999999999998 55999999999977654321 223457799999999999999999
Q ss_pred CccccccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 110 GAKGTRLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 110 ~~~~~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
++.|+|++|+.+||+||++||+||.||++.+.. ..++|||+|+||++||+.++ |++.+.++ ++|.+....+.
T Consensus 260 ~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~---~~hvPyRdSkLT~lLqdsLg--Gnskt~mI---~~vsP~~~~~~ 331 (344)
T 4a14_A 260 GSTGERLKESIQINSSLLALGNVISALGDPQRR---GSHIPYRDSKITRILKDSLG--GNAKTVMI---ACVSPSSSDFD 331 (344)
T ss_dssp -----------CCCSHHHHHHHHHHHHTCTTTT---TSCCCGGGCHHHHHTTTSSS--TTSEEEEE---EEECCBGGGHH
T ss_pred CCchhhhhhheeechhHHhhhhHHHhcCCcccc---CCCCCcchhhHHHHhHhhcC--CCcceEEE---EEeCCCccchh
Confidence 999999999999999999999999999975421 12349999999999999988 99888666 66666554443
No 14
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=99.96 E-value=9.3e-32 Score=251.55 Aligned_cols=161 Identities=29% Similarity=0.334 Sum_probs=136.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCcccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRL 116 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~ 116 (275)
..+++|.++.+..+.++|.++.|.|| .+|||||+||++.+...... ......|+|+|||||||||..++++.|.|+
T Consensus 175 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~skL~lVDLAGSEr~~~t~~~g~rl 250 (369)
T 3cob_A 175 ISTYEELKTIIQRGSEQRHTTGTLMN---EQSSRSHLIVSVIIESTNLQ-TQAIARGKLSFVDLAGSERVKKSGSAGNQL 250 (369)
T ss_dssp ECSHHHHHHHHHHHHHHTCCCSCCTT---CHHHHSEEEEEEEEEEEETT-TCCEEEEEEEEEECCCSSCCCCCSSCSHHH
T ss_pred eCCHHHHHHHHHHHhhcceeecccCC---CCCCcceEEEEEEEEEecCC-CCcEEEEEEEEEeCCCCCcccccCccchhh
Confidence 45678888888888899999999998 55999999999977554432 345678999999999999999999999999
Q ss_pred ccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEE
Q psy7272 117 KEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFE 196 (275)
Q Consensus 117 ~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~ 196 (275)
+|+++||+||++||+||.||+++.+|+ |||+|+||++|+++++ |++.+.++ ++|.+....+.
T Consensus 251 ~E~~~INkSL~aLg~vI~aL~~~~~hv------PyRdSkLT~lLqdsLg--Gnskt~mI---a~isP~~~~~~------- 312 (369)
T 3cob_A 251 KEAQSINKSLSALGDVISALSSGNQHI------PYRNHKLTMLMSDSLG--GNAKTLMF---VNISPAESNLD------- 312 (369)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTTCSCC------CGGGCHHHHHTTTTTT--SSSEEEEE---EEECCBGGGHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcC------CCcCCHHHHHHHHhcC--CCccEEEE---EEeCCccccHH-------
Confidence 999999999999999999999988877 9999999999999998 99888776 66666655544
Q ss_pred EeCCEEEEEeCCCCceEECCeeecc
Q psy7272 197 NVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 197 ~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
++..||+++++++.+.|+..++.
T Consensus 313 --ETl~TLrfA~rak~i~~~~~~n~ 335 (369)
T 3cob_A 313 --ETHNSLTYASRVRSIVNDPSKNV 335 (369)
T ss_dssp --HHHHHHHHHHHHHTCBCCCCCCE
T ss_pred --HHHHHHHHHHHHhhcccCCcccC
Confidence 66678888888888888776654
No 15
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=99.96 E-value=1.4e-31 Score=250.07 Aligned_cols=160 Identities=29% Similarity=0.333 Sum_probs=116.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCcccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRL 116 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~ 116 (275)
..+++|.++.+..+.++|.++.|.|| .+|||||+||+|.+...... ......|+|+|||||||||..+++++|.|+
T Consensus 180 V~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~skL~lVDLAGSEr~~~t~~~g~rl 255 (365)
T 2y65_A 180 VSSPEDVFEVIEEGKSNRHIAVTNMN---EHSSRSHSVFLINVKQENLE-NQKKLSGKLYLVDLAGSEKVSKTGAEGTVL 255 (365)
T ss_dssp ECSHHHHHHHHHHHHHHHTTTCSCHH---HHHHTSEEEEEEEEEEEETT-TCCEEEEEEEEEECCCCCC-----------
T ss_pred cCCHHHHHHHHHHHHhhcccccccCC---CCCCCceEEEEEEEEEEecC-CCCEeEEEEEEEECCCCCcchhcCCcchhH
Confidence 45788999999999999999999998 55999999999987654433 334677999999999999999999999999
Q ss_pred ccccccccchhhHHHHHHHhhhcc-cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEE
Q psy7272 117 KEGANINKSLTTLGKVISALAEIT-PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTF 195 (275)
Q Consensus 117 ~E~~~IN~SL~~Lg~vi~al~~~~-~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I 195 (275)
+|+.+||+||++||+||.||+++. .|+ |||+|+||++|+++++ |++.+.++ ++|.+......
T Consensus 256 ~E~~~INkSL~aLg~vI~aL~~~~~~hv------PyRdSkLT~lLqdsLg--Gnskt~mI---~~isP~~~~~~------ 318 (365)
T 2y65_A 256 DEAKNINKSLSALGNVISALADGNKTHI------PYRDSKLTRILQESLG--GNARTTIV---ICCSPASFNES------ 318 (365)
T ss_dssp -----CCHHHHHHHHHHHHHHHCCCSCC------CGGGCHHHHHTGGGTT--SSSEEEEE---EEECCBGGGHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCC------ccccCHHHHHHHhhcC--CCccEEEE---EEecCccCCHH------
Confidence 999999999999999999999863 565 9999999999999988 99887666 66665554444
Q ss_pred EEeCCEEEEEeCCCCceEECCeeec
Q psy7272 196 ENVEGVVTLIPFQEALCYVNGRQIS 220 (275)
Q Consensus 196 ~~~e~~vtL~~~s~a~t~VNG~~I~ 220 (275)
++..||+++.+|+.+.|...++
T Consensus 319 ---ETl~TL~fA~rak~I~n~~~~n 340 (365)
T 2y65_A 319 ---ETKSTLDFGRRAKTVKNVVCVN 340 (365)
T ss_dssp ---HHHHHHHHHHHHTTCEEECCCE
T ss_pred ---HHHHHHHHHHHHhcccCcceeC
Confidence 5666788887777666655554
No 16
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=99.96 E-value=7.7e-31 Score=244.61 Aligned_cols=153 Identities=29% Similarity=0.302 Sum_probs=106.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecC-CCCcceeEeeeEEeeccCcccccccCcccc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDM-TDLTTEKVSKISLVDLAGSERADSTGAKGT 114 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~-~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~ 114 (275)
...+++|.++....+.++|.++.|.|| .+|||||+||+|.+..... ........|+|+|||||||||..+++++|+
T Consensus 203 ~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~i~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~ 279 (359)
T 3nwn_A 203 LTSQEEDAFSLLFEGETNRIIASHTMN---KNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQ 279 (359)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHHHHHT---CCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------
T ss_pred EecCHHHHHHHHHhhhhhcccccccCc---cccCcceEEEEEEEEeecccccCcccccccceeeeccccccccccCCchh
Confidence 356788999999999999999999998 5599999999997654332 334556789999999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHhhhc-ccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccce
Q psy7272 115 RLKEGANINKSLTTLGKVISALAEI-TPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHC 193 (275)
Q Consensus 115 ~~~E~~~IN~SL~~Lg~vi~al~~~-~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc 193 (275)
|++|+.+||+||++||+||.||+++ .+|+ |||+|+||++||+.++ |++.+.++ ++|.+....+.
T Consensus 280 rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hV------PYRdSkLT~lLqdsLg--Gnskt~mI---~~isP~~~~~~---- 344 (359)
T 3nwn_A 280 VLKEATYINKSLSFLEQAIIALGDQKRDHI------PFRQCKLTHALKDSLG--GNCNMVLV---TNIYGEAAQLE---- 344 (359)
T ss_dssp ------CCSTHHHHHHHHHHHHHC-----C------CGGGSHHHHHTHHHHS--SSSEEEEE---EEECCSGGGHH----
T ss_pred HHHhhhhhcccHHHHHHHHHHHHhcCCCcC------CcccCHHHHHHHHhcC--CCccEEEE---EEeCCchhhHH----
Confidence 9999999999999999999999974 3566 9999999999999988 99888777 77766555544
Q ss_pred EEEEeCCEEEEEeCCCCc
Q psy7272 194 TFENVEGVVTLIPFQEAL 211 (275)
Q Consensus 194 ~I~~~e~~vtL~~~s~a~ 211 (275)
++..||+++++|+
T Consensus 345 -----ETlsTL~fA~rak 357 (359)
T 3nwn_A 345 -----ETLSSLRFASRMK 357 (359)
T ss_dssp -----HHHHHHHHHTTGG
T ss_pred -----HHHHHHHHHHHHc
Confidence 4444555555543
No 17
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.9e-30 Score=243.22 Aligned_cols=138 Identities=30% Similarity=0.330 Sum_probs=95.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCccc---
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKG--- 113 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~--- 113 (275)
..+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+...... ......|+|+|||||||||..++++.|
T Consensus 220 V~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~Ifti~v~~~~~~-~~~~~~skL~lVDLAGSEr~~~t~~~g~~~ 295 (376)
T 2rep_A 220 VSCEKEVDALLHLARQNRAVARTAQN---ERSSRSHSVFQLQISGEHSS-RGLQCGAPLSLVDLAGSERLDPGLALGPGE 295 (376)
T ss_dssp ECSHHHHHHHHHHHHHHHHHCC--------CGGGSEEEEEEEEEEEESS-SCCEEEEEEEEEECCCCC------------
T ss_pred eCCHHHHHHHHHHHHhhcccccccCC---CCCCCceEEEEEEEEEEecC-CCcEEEeEEEEEECCCCcccccccccCccc
Confidence 34678999999999999999999998 56999999999987654432 334567999999999999999999999
Q ss_pred -cccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 114 -TRLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 114 -~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
+|++|+.+||+||++||+||.||+++..|+ |||+|+||++||++++ |++.+.|+ ++|.+....+.
T Consensus 296 ~~rlkE~~~INkSL~aLg~vI~aL~~~~~hV------PYRdSkLT~LLqdsLg--GnskT~mI---a~isP~~~~~~ 361 (376)
T 2rep_A 296 RERLRETQAINSSLSTLGLVIMALSNKESHV------PYRNSKLTYLLQNSLG--GSAKMLMF---VNISPLEENVS 361 (376)
T ss_dssp ------------CHHHHHHHHHHHHTTCSCC------CGGGSHHHHHTGGGTS--TTCEEEEE---EEECCCGGGHH
T ss_pred cchhhHHhHhhHHHHHHHHHHHHHhcCCCcc------CCcCCHHHHHHHHhhC--CCCeEEEE---EEeCCchhhHH
Confidence 999999999999999999999999988887 9999999999999988 99888777 67766555544
No 18
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=99.96 E-value=4.3e-31 Score=246.15 Aligned_cols=142 Identities=32% Similarity=0.415 Sum_probs=93.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCC--CCcceeEeeeEEeeccCcccccccCcccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMT--DLTTEKVSKISLVDLAGSERADSTGAKGT 114 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~--~~~~~~~s~l~lvDLAGSEr~~~~~~~~~ 114 (275)
..+++|.++.+..+.++|.++.|.|| ..|||||+||+|.+...... .....+.|+|+|||||||||..++++.|+
T Consensus 197 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~ 273 (355)
T 3lre_A 197 PKSSEEILHLLDNGNKNRTQHPTDMN---ATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGT 273 (355)
T ss_dssp CCSHHHHHHHHHHHHHTSCBC--------CBCTTCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC---------
T ss_pred cCCHHHHHHHHHHHHhcCCcccccCc---CCCCCCcEEEEEEEEEecCCCCCCCCEEEEEEEEEECCCCCcCcCCCCccH
Confidence 35788888989999999999999998 55999999999977654432 23446779999999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 115 RLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 115 ~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
|++|+.+||+||++||+||.||++.+.. -.++|||+|+||++||++++ |++.+.++ ++|.+......
T Consensus 274 rl~E~~~INkSL~aLg~vI~aL~~~~~~---~~hiPyRdSkLT~lL~dsLg--Gnskt~mI---a~isP~~~~~~ 340 (355)
T 3lre_A 274 RFVEGTNINRSLLALGNVINALADSKRK---NQHIPYRNSKLTRLLKDSLG--GNCQTIMI---AAVSPSSVFYD 340 (355)
T ss_dssp --------CHHHHHHHHHHHHHC-----------CCGGGSHHHHHTTTTSS--TTSEEEEE---EEECCBGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC---CCcCCcccCHHHHHHHHhcC--CCceEEEE---EEeCCchhhHH
Confidence 9999999999999999999999975431 12349999999999999988 99888776 66666555544
No 19
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=99.95 E-value=1.4e-31 Score=248.77 Aligned_cols=137 Identities=30% Similarity=0.392 Sum_probs=106.7
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCccccccc
Q psy7272 38 ETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRLK 117 (275)
Q Consensus 38 ~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~~ 117 (275)
.+++|.+..++.+.++|.++.|.|| .+|||||+||+|.+...... ......|+|+|||||||||..++++.|+|++
T Consensus 187 ~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~ 262 (347)
T 1f9v_A 187 ESEEMVEIILKKANKLRSTASTASN---EHSSASHSIFIIHLSGSNAK-TGAHSYGTLNLVDLAGSERINVSQVVGDRLR 262 (347)
T ss_dssp SSGGGHHHHHHHHC--------------CCGGGSEEEEEEEEEEECC---CCEEEEEEEEEECCCCCCCCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHhccceeeccCC---CCCCCceEEEEEEEEEecCC-CCceeeeEEEEEECCCCccccccccchhhhH
Confidence 4678888999999999999999998 55999999999987554332 2345789999999999999999999999999
Q ss_pred cccccccchhhHHHHHHHhhhcc---cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 118 EGANINKSLTTLGKVISALAEIT---PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 118 E~~~IN~SL~~Lg~vi~al~~~~---~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
|+.+||+||++||+||.||++.. .|+ |||+|+||++||++++ |++.+.|+ ++|.+....+.
T Consensus 263 E~~~IN~SL~aLg~vI~aL~~~~~~~~hi------PyRdSkLT~lLqdsLg--Gnskt~mI---~~vsP~~~~~~ 326 (347)
T 1f9v_A 263 ETQNINKSLSCLGDVIHALGQPDSTKRHI------PFRNSKLTYLLQYSLT--GDSKTLMF---VNISPSSSHIN 326 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCC---CCC------CGGGSHHHHHHHHHHS--TTCEEEEE---EEECCSGGGHH
T ss_pred HHHHHhHHHHHHHHHHHHHhcccCCCCcC------ccccCHHHHHHHHHhC--CCccEEEE---EEeCCccccHH
Confidence 99999999999999999999866 555 9999999999999988 99888776 67666555544
No 20
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=99.95 E-value=1.7e-30 Score=242.09 Aligned_cols=172 Identities=33% Similarity=0.396 Sum_probs=117.2
Q ss_pred eEEecCCcchHHHHHHHHHHH------------------HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCce
Q psy7272 10 QTVAPASVIAEEAVDQLQASE------------------KLIAELNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNT 71 (275)
Q Consensus 10 ~~~~~~~~~~~~~~~~L~e~E------------------~L~~el~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrs 71 (275)
..|..+|.|.|.+.|.|.... .|.+....+++|.+..++.+.++|.++.|.|| ..||||
T Consensus 143 v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRS 219 (354)
T 3gbj_A 143 VEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMN---EESSRS 219 (354)
T ss_dssp EEEEEEEEETTEEEETTC------CBCBC------CCBTTCCCEEECSHHHHHHHHHHHHHCC-------------CTTS
T ss_pred eeceeEEEecCeeeEccCCCCCCcceEEEEcCCCCEEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCC---CCCCcc
Confidence 345666777777666664321 12222335789999999999999999999998 559999
Q ss_pred eeEEeeeeeee---cCCCCcceeEeeeEEeeccCcccccccCccccccccccccccchhhHHHHHHHhhhcccCCcCCCC
Q psy7272 72 VGVFSPQKAVD---DMTDLTTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEITPHLVNLNE 148 (275)
Q Consensus 72 h~if~i~~~~~---~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~ 148 (275)
|+||+|.+... ...+....+.|+|+|||||||||..++++.|+|++|+.+||+||++||+||.||++.........+
T Consensus 220 H~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~h 299 (354)
T 3gbj_A 220 HAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKF 299 (354)
T ss_dssp EEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHHHC------CCC
T ss_pred cEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCc
Confidence 99999976443 234445567899999999999999999999999999999999999999999999974321111234
Q ss_pred CCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 149 DPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 149 ~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
+|||+|+||++||+.++ |++.+.|+ ++|.+....+.
T Consensus 300 vPyRdSkLT~lLqdsLg--Gnskt~mI---a~vsP~~~~~~ 335 (354)
T 3gbj_A 300 VPYRDSVLTWLLKDSLG--GNSKTAMV---ATVSPAADNYD 335 (354)
T ss_dssp CCGGGSHHHHHTHHHHS--TTCEEEEE---EEECCBGGGHH
T ss_pred ccccccHHHHHHHHHhC--CCCeEEEE---EEeCCCcchHH
Confidence 49999999999999998 99888777 67766655544
No 21
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=99.95 E-value=3.9e-31 Score=252.60 Aligned_cols=169 Identities=33% Similarity=0.354 Sum_probs=118.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeec---CCCCcceeEeeeEEeeccCcccccccC
Q psy7272 34 AELNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDD---MTDLTTEKVSKISLVDLAGSERADSTG 110 (275)
Q Consensus 34 ~el~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~---~~~~~~~~~s~l~lvDLAGSEr~~~~~ 110 (275)
+....+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+.... ..+....+.|+|+|||||||||..+++
T Consensus 234 e~~V~s~~e~~~ll~~G~~~R~~~~T~~N---~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~ 310 (443)
T 2owm_A 234 EVPVRGLEEIIRWMRIGDGSRTVASTKMN---DTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTE 310 (443)
T ss_dssp CEECCSHHHHHHHHHHHHTTSCBCSSSSS---CBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC-----
T ss_pred EEEcCCHHHHHHHHHHHHhhCCcccCcCC---CccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECCCCccccccC
Confidence 34456789999999999999999999998 559999999999765432 234456778999999999999999999
Q ss_pred ccccccccccccccchhhHHHHHHHhhhcccCC----------------cCCCCCCCCcceeEEEeeccccccCCCCCCC
Q psy7272 111 AKGTRLKEGANINKSLTTLGKVISALAEITPHL----------------VNLNEDPFMSECLIYYIKDGRTKVGSAESNL 174 (275)
Q Consensus 111 ~~~~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l----------------~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~ 174 (275)
++|+|++|+.+||+||++||+||.||++.+.+. ....++|||+|+||++||+.++ |++.+.|
T Consensus 311 ~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLg--GnskT~m 388 (443)
T 2owm_A 311 ATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLG--GNSKTAM 388 (443)
T ss_dssp ---------CCSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTT--SSCEEEE
T ss_pred CccccccchhhhcHHHHHHHHHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhC--CCCcEEE
Confidence 999999999999999999999999999865431 1123569999999999999998 9988766
Q ss_pred CCCcceeeecCCcccccceEEEEeCCEEEEEeCCCCceEECCeeecc
Q psy7272 175 PQESQDIQLSGSHIKTEHCTFENVEGVVTLIPFQEALCYVNGRQISE 221 (275)
Q Consensus 175 ~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~s~a~t~VNG~~I~~ 221 (275)
+ ++|.+. + +.++..||+++.+|+.+.|...+++
T Consensus 389 I---a~iSP~-------~----~~ETlsTLrfA~rak~I~n~~~vN~ 421 (443)
T 2owm_A 389 I---ACISPT-------D----YDETLSTLRYADQAKRIRTRAVVNQ 421 (443)
T ss_dssp E---EEECSS-------C----HHHHHHHHHHHHHHTTCEECCCCCC
T ss_pred E---EEeccc-------c----HHHHHHHHHHHHHHhhccccceecc
Confidence 5 555432 2 3578889999988887777766654
No 22
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=99.95 E-value=8.3e-31 Score=244.50 Aligned_cols=183 Identities=22% Similarity=0.211 Sum_probs=138.4
Q ss_pred eEEecCCcchHHHHHHHHHHHHH--HH-------------HHHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeE
Q psy7272 10 QTVAPASVIAEEAVDQLQASEKL--IA-------------ELNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGV 74 (275)
Q Consensus 10 ~~~~~~~~~~~~~~~~L~e~E~L--~~-------------el~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~i 74 (275)
..|..+|.|.|.+.|.|.....+ .+ .-..+++|.++.+..+.++|.++.|.|| .+|||||+|
T Consensus 139 v~vS~~EIYnE~v~DLL~~~~~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N---~~SSRSH~i 215 (360)
T 1ry6_A 139 IFISFYEIYCGKLYDLLQKRKMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQN---DESSRSHAI 215 (360)
T ss_dssp EEEEEEEEETTEEEESCCC-----------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCT---TGGGGSEEE
T ss_pred EEEEEEEeeCCeeEEcccCCccceeeEcCCCCEEEcCcEEEEeCCHHHHHHHHHHHhhhhhccccccc---CCCccceEE
Confidence 45666677777666655433221 11 1124679999999999999999999998 569999999
Q ss_pred EeeeeeeecCCCCcceeEeeeEEeeccCcccccccCccc-cccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCc
Q psy7272 75 FSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKG-TRLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMS 153 (275)
Q Consensus 75 f~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~-~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~ 153 (275)
|+|.+.... .....|+|+|||||||||..++++.| .+++|+++||+||++||+||.||++++.|+ |||+
T Consensus 216 f~i~v~~~~----~~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hv------PyRd 285 (360)
T 1ry6_A 216 LNIDLKDIN----KNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHI------PFRD 285 (360)
T ss_dssp EEEEEEETT----TTEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSC------CGGG
T ss_pred EEEEEEecc----CCcceeEEEEEECCCCccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCC------cccc
Confidence 999875432 23567999999999999999999877 568999999999999999999999887777 9999
Q ss_pred ceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeCCCCceEECCeee
Q psy7272 154 ECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPFQEALCYVNGRQI 219 (275)
Q Consensus 154 s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~s~a~t~VNG~~I 219 (275)
|+||++||++++ |++.+.++ ++|.+...... ++..||+++++++.+.|....
T Consensus 286 SkLT~lLqdsLg--Gnskt~mI---a~isP~~~~~~---------ETlsTLrfA~rak~i~n~~~~ 337 (360)
T 1ry6_A 286 SELTKVLRDIFV--GKSKSIMI---ANISPTISCCE---------QTLNTLRYSSRVKNKGNSKLE 337 (360)
T ss_dssp CHHHHHTGGGGS--SSCEEEEE---EEECCBGGGHH---------HHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHhC--CCCeEEEE---EEeCCCcccHH---------HHHHHHHHHHHHhhcccCccc
Confidence 999999999988 99888766 66666555544 566677788777777664433
No 23
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=99.95 E-value=4.3e-30 Score=238.35 Aligned_cols=158 Identities=19% Similarity=0.220 Sum_probs=106.5
Q ss_pred EEecCCcchHHHHHHHHHHH----------HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeee
Q psy7272 11 TVAPASVIAEEAVDQLQASE----------KLIAELNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKA 80 (275)
Q Consensus 11 ~~~~~~~~~~~~~~~L~e~E----------~L~~el~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~ 80 (275)
.|..+|.|.|.+.|.|.... .+......+++|.+..++.+.++|.++.|.|| ..|||||+||+|.+.
T Consensus 153 ~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~Ifti~v~ 229 (344)
T 3dc4_A 153 YASFIEIYNEKPFDLLGSTPHMPMVAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMN---SNSSRSHAIVTIHVK 229 (344)
T ss_dssp EEEEEEEESSCEEETTSSCTTSBCCSSTTTCSCCEECSSHHHHHHHHHHHHHTCC-------------CCEEEEEEEEEE
T ss_pred EEEEEEEeCCeeEEccCCCCCCccccccccCceecccCCHHHHHHHHHHHHhhcccccccCC---CCCCCceEEEEEEEE
Confidence 45556666666655553221 11111234789999999999999999999998 559999999999874
Q ss_pred eecCCCCcceeEeeeEEeeccCcccccccCccccccccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEe
Q psy7272 81 VDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYI 160 (275)
Q Consensus 81 ~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L 160 (275)
. ....|+|+|||||||||..++++.|++++|+.+||+||++||+||.||++++.|+ |||+|+||++|
T Consensus 230 ~-------~~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~~hi------PyRdSkLT~lL 296 (344)
T 3dc4_A 230 S-------KTHHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVI------PYRDSVLTTVL 296 (344)
T ss_dssp C-------SSCEEEEEEEECCCCCCC-------------CCSCCHHHHHHHHHHHHHTTCSSC------CGGGSHHHHHT
T ss_pred e-------cCcEEEEEEEECCCCccccccccccchhHHHHHHhHhHHHHHHHHHHHhccCCcC------CccccHHHHHH
Confidence 3 2357999999999999999999999999999999999999999999999988877 99999999999
Q ss_pred eccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 161 KDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 161 ~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
|++++ |++.+.++ ++|.+....+.
T Consensus 297 qdsLg--Gnskt~mI---a~isP~~~~~~ 320 (344)
T 3dc4_A 297 QASLT--AQSYLTFL---ACISPHQCDLS 320 (344)
T ss_dssp TTTSS--TTCEEEEE---EEECCCGGGHH
T ss_pred HHHhC--CCCEEEEE---EEeCCchhhHH
Confidence 99998 99888776 66666555544
No 24
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=99.95 E-value=2.5e-30 Score=240.56 Aligned_cols=141 Identities=27% Similarity=0.328 Sum_probs=103.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCcccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRL 116 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~ 116 (275)
..+++|.+..+..+.++|.++.|.|| .+|||||+||++.+...... ......|+|+|||||||||..+++++|+|+
T Consensus 189 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl 264 (349)
T 3t0q_A 189 MTSTSQVDTILKKASKMRSTAATRSN---ERSSRSHSVFMVHINGRNLH-TGETSQGKLNLVDLAGSERINSSAVTGERL 264 (349)
T ss_dssp CCCHHHHHHHHHHC---------------CTGGGSEEEEEEEEEEEETT-TCCEEEEEEEEEECCCCCCCC----CCHHH
T ss_pred eCCHHHHHHHHHHHHHhCcccccccc---cccCCcceEEEEEEEEEecC-CCCeeEEEEEEEeCCCCCccccccCccccc
Confidence 35789999999999999999999998 55999999999987654433 234567999999999999999999999999
Q ss_pred ccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 117 KEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 117 ~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
+|+.+||+||++||+||.||++....- .++|||+|+||++||++++ |++.+.++ ++|.+....+.
T Consensus 265 ~E~~~INkSL~aLg~vI~aL~~~~~~~---~hiPyRdSkLT~lLqdsLg--Gnskt~mi---~~vsP~~~~~~ 329 (349)
T 3t0q_A 265 RETQNINKSLSCLGDVIYALNTPDAGK---RYIPFRNSKLTYLLQYSLV--GDSKTLMF---VNIPPDPNHIS 329 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTGGG---SCCCGGGSHHHHHHGGGSS--TTCEEEEE---EEECCCGGGHH
T ss_pred hhHHhhhHhHHHHHHHHHHHhcccCCC---CcCCCcCCHHHHHHHHhcC--CCceEEEE---EEeCCchhhHH
Confidence 999999999999999999999765410 2339999999999999988 99888776 67766555544
No 25
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=99.95 E-value=3e-30 Score=238.33 Aligned_cols=139 Identities=28% Similarity=0.412 Sum_probs=113.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCccccc
Q psy7272 36 LNETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTR 115 (275)
Q Consensus 36 l~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~ 115 (275)
...+++|.++.++.+.++|.++.|.|| .+|||||+||++.+...... ......|+|+|||||||||..++++.|.|
T Consensus 175 ~v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~skL~lVDLAGSEr~~~t~~~g~r 250 (330)
T 2h58_A 175 QVQSVDDINKVFEFGHTNRTTEFTNLN---EHSSRSHALLIVTVRGVDCS-TGLRTTGKLNLVDLAGSERVGKSGAEGSR 250 (330)
T ss_dssp EECSHHHHHHHHHHHHHHTTCTTCCSC---SCGGGSEEEEEEEEEEEETT-TTEEEEEEEEEEECCCCCCCC------HH
T ss_pred EeCCHHHHHHHHHHHHhhCCcccccCC---CCcCCccEEEEEEEEEEecC-CCcEEEEEEEEEeCCCCCcccccCCchhh
Confidence 345788899999999999999999998 55999999999987554332 34567899999999999999999999999
Q ss_pred cccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 116 LKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 116 ~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
++|+.+||+||++||+||.||++++.|+ |||+|+||++||+.++ |++.+.++ ++|.+......
T Consensus 251 ~~E~~~IN~SL~aLg~vI~aL~~~~~hv------PyRdSkLT~lL~dsLg--Gns~t~mI---~~isP~~~~~~ 313 (330)
T 2h58_A 251 LREAQHINKSLSALGDVIAALRSRQGHV------PFRNSKLTYLLQDSLS--GDSKTLMV---VQVSPVEKNTS 313 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSCC------CGGGSHHHHHTHHHHS--TTCEEEEE---EEECCBGGGHH
T ss_pred hHHHHHhhHhHHHHHHHHHHHhcCCCCC------cccccHHHHHHHHHhC--CCceEEEE---EEeCCccccHH
Confidence 9999999999999999999999988887 9999999999999988 99888766 66666555444
No 26
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1e-30 Score=247.27 Aligned_cols=141 Identities=28% Similarity=0.347 Sum_probs=112.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCcccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRL 116 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~ 116 (275)
..+++|.+..+..+.++|.++.|.|| .+|||||+||+|.+...... ......|+|+|||||||||..++++.|+|+
T Consensus 242 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl 317 (403)
T 4etp_A 242 LESEEMVEIILKKANKLRSTASTASN---EHSSRSHSIFIIHLSGSNAK-TGAHSYGTLNLVDLAGSERINVSQVVGDRL 317 (403)
T ss_dssp CCCHHHHHHHHHHHC--C----CHHH---HHHHTSEEEEEEEEEEEETT-TCCEEEEEEEEEECCCCCCCCCSSCCHHHH
T ss_pred eCCHHHHHHHHHHHHHhcccccccCC---cccCCcccEEEEEEEEeecC-CCCeeEEEEEEEECCCCccccccCChhHHH
Confidence 34678888889999999999999998 55999999999987554432 234567999999999999999999999999
Q ss_pred ccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCccc
Q psy7272 117 KEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 117 ~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
+|+.+||+||++||+||.||++..+.- .++|||+|+||++|+++++ |++.+.|+ ++|.+....+.
T Consensus 318 ~E~~~INkSL~aLg~vI~aL~~~~~~~---~hiPyRdSkLT~LLqdsLg--Gnskt~mi---~~vsP~~~~~~ 382 (403)
T 4etp_A 318 RETQNINKSLSALGDVIHALGQPDSTK---RHIPFRNSKLTYLLQYSLT--GDSKTLMF---VNISPSSSHIN 382 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCTTT---SCCCGGGSHHHHHTGGGTS--TTCEEEEE---EEECCSGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCC---CcCCcccchHHHHHHHhcC--CCceEEEE---EEeCCchhhHH
Confidence 999999999999999999999865410 2339999999999999998 99888776 67666655544
No 27
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=99.94 E-value=7.9e-30 Score=239.46 Aligned_cols=146 Identities=25% Similarity=0.222 Sum_probs=99.8
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccC-ccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTG-AKGTR 115 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~-~~~~~ 115 (275)
..+++|.++.++.+.++|.++.|.|| .+|||||+||+|.+... ....|+|+|||||||||..+++ +.+++
T Consensus 233 V~s~~e~~~ll~~G~~~R~~~~T~~N---~~SSRSH~Ifti~v~~~------~~~~skL~lVDLAGSER~~~t~~~~~~~ 303 (387)
T 2heh_A 233 VNSADDVIKMIDMGSACRTSGQTFAN---SNSSRSHACFQIILRAK------GRMHGKFSLVDLAGNERGADTSSADRQT 303 (387)
T ss_dssp ESSHHHHHHHHHHHHHHC------------CGGGSEEEEEEEEESS------SSEEEEEEEEECCCCC------------
T ss_pred eCCHHHHHHHHHHHHhhCCcccCcCc---CCcccceEEEEEEEEEC------CeeeeEEEEEECCCCccccccccccccc
Confidence 45788899999999999999999998 55999999999977543 2467999999999999998876 46788
Q ss_pred cccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeecc-ccccCCCCCCCCCCcceeeecCCcccccceE
Q psy7272 116 LKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDG-RTKVGSAESNLPQESQDIQLSGSHIKTEHCT 194 (275)
Q Consensus 116 ~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~-~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~ 194 (275)
++|+++||+||++||+||.||+++..|+ |||+|+||++|||+ ++ |++.+.++ ++|.+....+.
T Consensus 304 ~~E~~~INkSL~aLg~vI~aL~~~~~hv------PYRdSKLTrlLqdsllG--gnskT~mI---a~isP~~~~~~----- 367 (387)
T 2heh_A 304 RMEGAEINKSLLALKECIRALGQNKAHT------PFRESKLTQVLRDSFIG--ENSRTCMI---ATISPGISSCE----- 367 (387)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHTTCSCC------CGGGSHHHHHTGGGGSS--TTEEEEEE---EEECCBGGGHH-----
T ss_pred hhhHHHHhHHHHHHHHHHHHHhcCCCCC------CccccHHHHHHhhhccC--CCCeEEEE---EEeCCccchHH-----
Confidence 9999999999999999999999988777 99999999999998 46 78877666 66666555444
Q ss_pred EEEeCCEEEEEeCCCCc
Q psy7272 195 FENVEGVVTLIPFQEAL 211 (275)
Q Consensus 195 I~~~e~~vtL~~~s~a~ 211 (275)
++..||+++++++
T Consensus 368 ----ETlsTLrfA~rak 380 (387)
T 2heh_A 368 ----YTLNTLRYADRVK 380 (387)
T ss_dssp ----HHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHHhc
Confidence 4444555554443
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=99.94 E-value=4.4e-29 Score=251.72 Aligned_cols=151 Identities=24% Similarity=0.318 Sum_probs=106.1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCcccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRL 116 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~ 116 (275)
..+++|.++.+..+.++|.++.|.|| .+|||||+||+|.+..... .......|+|+|||||||||..+++++|+|+
T Consensus 558 v~~~~~~~~~~~~g~~~r~~~~t~~n---~~ssRSH~i~~i~~~~~~~-~~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~ 633 (715)
T 4h1g_A 558 IKSPEQAITILNQANKKRSTAATKSN---DHSSRSHSIFIIDLQGYNS-LTKESSYGTLNLIDLAGSERLNNSRAEGDRL 633 (715)
T ss_dssp CSCHHHHHHHHHHHHCC-------------CGGGSEEEEEEEEEEEET-TTCCEEEEEEEEEECCCCCC---------CH
T ss_pred cCCHHHHHHHHHHHHhccCccccccc---CccccccEEEEEEEEEEec-CCCCEeEEEEEEEeCCCcccccccCChhHHH
Confidence 45678888888899999999999998 5699999999997755433 2345678999999999999999999999999
Q ss_pred ccccccccchhhHHHHHHHhhhcc-cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEE
Q psy7272 117 KEGANINKSLTTLGKVISALAEIT-PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTF 195 (275)
Q Consensus 117 ~E~~~IN~SL~~Lg~vi~al~~~~-~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I 195 (275)
+|+++||+||++||+||.||+.+. +|+ |||+|+||++||++++ |++.+.++ ++|.+....+.
T Consensus 634 ~E~~~IN~sL~~L~~vi~al~~~~~~~v------pyR~SkLT~lL~~slg--gn~~t~~i---~~isp~~~~~~------ 696 (715)
T 4h1g_A 634 KETQAINKSLSCLGDVIHSLNLKDGSHV------PYRNSKLTYLLKHSLG--GNSKTLMF---VNISPLTKDLN------ 696 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCCCC------CGGGCHHHHHTGGGTS--TTCEEEEE---EEECCBGGGHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcC------CCccCHHHHHHHhhcC--CCceEEEE---EEECCChhhHH------
Confidence 999999999999999999998654 565 9999999999999988 99887666 66665554444
Q ss_pred EEeCCEEEEEeCCCCc
Q psy7272 196 ENVEGVVTLIPFQEAL 211 (275)
Q Consensus 196 ~~~e~~vtL~~~s~a~ 211 (275)
++..||+++++++
T Consensus 697 ---et~~tL~fa~r~~ 709 (715)
T 4h1g_A 697 ---ETINSLRFATKVN 709 (715)
T ss_dssp ---HHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHhc
Confidence 4455666665543
No 29
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=99.94 E-value=8.9e-29 Score=233.73 Aligned_cols=133 Identities=26% Similarity=0.238 Sum_probs=92.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccC-ccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTG-AKGTR 115 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~-~~~~~ 115 (275)
..+++|.++.+..+.++|.++.|.|| .+|||||+||+|.+... ....|+|+|||||||||..+++ +.+++
T Consensus 253 V~s~~e~~~ll~~G~~~R~~~~T~~N---~~SSRSH~Ifti~v~~~------~~~~skL~lVDLAGSER~~~t~~~~~~~ 323 (410)
T 1v8k_A 253 VTCADDVIKMINMGSACRTSGQTFAN---SNSSRSHACFQILLRTK------GRLHGKFSLVDLAGNERGADTSSADRQT 323 (410)
T ss_dssp ESSHHHHHHHHHHHHHTCC-----------CCCSSEEEEEEEEESS------SSEEEEEEEEECCCCCC-----------
T ss_pred eCCHHHHHHHHHHHHhhCCcccccCC---CCCCCceEEEEEEEEeC------CcceeEEEEEECCCccccccccccccch
Confidence 45678888888899999999999998 55999999999977543 2467999999999999998876 46788
Q ss_pred cccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeecc-ccccCCCCCCCCCCcceeeecCCccc
Q psy7272 116 LKEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDG-RTKVGSAESNLPQESQDIQLSGSHIK 189 (275)
Q Consensus 116 ~~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~-~t~IGr~~~~~~~~~~dI~L~~~~Is 189 (275)
++|+++||+||++||+||.||+++..|+ |||+|+||++|+++ ++ |++.+.|+ ++|.+....+.
T Consensus 324 ~~E~~~INkSL~aLg~vI~aL~~~~~hI------PYRdSKLTrLLqdsllG--gnskT~mI---a~iSP~~~~~~ 387 (410)
T 1v8k_A 324 RMEGAEINKSLLALKECIRALGQNKAHT------PFRESKLTQVLRDSFIG--ENSRTCMI---AMISPGISSCE 387 (410)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHTC------------CCCCHHHHHTTHHHHS--SSEEEEEE---EEECCBGGGHH
T ss_pred hHHHHHHhHHHHHHHHHHHHHhcCCCCC------CcccchhHHHHhhcccC--CCceEEEE---EEeCCccccHH
Confidence 9999999999999999999999887777 99999999999998 46 78877666 66666555444
No 30
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=99.93 E-value=6.8e-28 Score=228.32 Aligned_cols=142 Identities=20% Similarity=0.213 Sum_probs=105.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhccccccCCceeeEEeeeeeeecCCCCcceeEeeeEEeeccCcccccccCcccccc
Q psy7272 37 NETWEEKLKRTEEIRIQREAVFAEMGVAVKEDGNTVGVFSPQKAVDDMTDLTTEKVSKISLVDLAGSERADSTGAKGTRL 116 (275)
Q Consensus 37 ~~t~EE~L~~~e~~~~~r~~~~t~~~~~~~~ssrsh~if~i~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~~~~~ 116 (275)
..+++|.+..+..+.++|.++.|.|| .+|||||+||+|.+...... ......|+|+|||||||||.. .+.|+
T Consensus 234 v~s~~e~~~ll~~g~~~R~~~~T~~N---~~SSRSH~if~i~v~~~~~~-~~~~~~~kL~lVDLAGSEr~~----~~~rl 305 (412)
T 3u06_A 234 VLDPNHLRHLMHTAKMNRATASTAGN---ERSSRSHAVTKLELIGRHAE-KQEISVGSINLVDLAGSESPK----TSTRM 305 (412)
T ss_dssp CCSHHHHHHHHHHHHHHCC-----CH---HHHTTCEEEEEEEEEEEETT-TTEEEEEEEEEEECCCCCC-----------
T ss_pred eCCHHHHHHHHHHHHhcccccccCCC---CCCcCceEEEEEEEEEEeCC-CCCEEEEEEEEEECCCCCcCC----ccchh
Confidence 34678888888889999999999998 55999999999977554432 344677999999999999974 46899
Q ss_pred ccccccccchhhHHHHHHHhhhcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEE
Q psy7272 117 KEGANINKSLTTLGKVISALAEITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFE 196 (275)
Q Consensus 117 ~E~~~IN~SL~~Lg~vi~al~~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~ 196 (275)
+|+.+||+||++||+||.||+++++|+ |||+|+||++|+++++ |++.+.|+ ++|.+....+....+.+.
T Consensus 306 ~E~~~INkSL~aLg~vI~aL~~~~~hi------PyRdSkLT~LLqdsLg--Gnskt~mI---~~vsP~~~~~~ETl~TLr 374 (412)
T 3u06_A 306 TETKNINRSLSELTNVILALLQKQDHI------PYRNSKLTHLLMPSLG--GNSKTLMF---INVSPFQDCFQESVKSLR 374 (412)
T ss_dssp ---CTTTHHHHHHHHHHHHHHTTCSCC------CGGGSHHHHHHGGGTS--TTCEEEEE---EEECCBGGGHHHHHHHHH
T ss_pred HhHHHHhHHHHHHHHHHHHHhccCCCC------CccccHHHHHHHHhcC--CCceEEEE---EEeCCChhhHHHHHHHHH
Confidence 999999999999999999999988887 9999999999999998 99988777 777777666664444444
Q ss_pred E
Q psy7272 197 N 197 (275)
Q Consensus 197 ~ 197 (275)
+
T Consensus 375 f 375 (412)
T 3u06_A 375 F 375 (412)
T ss_dssp H
T ss_pred H
Confidence 3
No 31
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.92 E-value=3.7e-25 Score=176.95 Aligned_cols=100 Identities=47% Similarity=0.784 Sum_probs=93.3
Q ss_pred hcccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEE-eCCEEEEEeCCCCceEECC
Q psy7272 138 EITPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFEN-VEGVVTLIPFQEALCYVNG 216 (275)
Q Consensus 138 ~~~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~-~e~~vtL~~~s~a~t~VNG 216 (275)
...||+++|+++|+....++|+|+++ ++|||.++ +||+|.++.|+++||.|.. .++.++|+|+++|+|||||
T Consensus 24 ~~~PhLvnLn~Dp~~s~~l~y~L~~~-t~IGR~~~------~DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~~ngt~VNG 96 (124)
T 3fm8_A 24 DDKCFLVNLNADPALNELLVYYLKEH-TLIGSANS------QDIQLCGMGILPEHCIIDITSEGQVMLTPQKNTRTFVNG 96 (124)
T ss_dssp ---CEEEETTCCTTSSCCCEEECCSE-EEEESSTT------CSEECCSTTCCSSCEEEEECTTSCEEEEECTTCCEEETT
T ss_pred CCccEEEEeCCCCccCceEEEECCCC-eEECCCCC------CCEEECCCCeecceEEEEECCCCeEEEEECCCCCEEECC
Confidence 34799999999999999999999996 89999877 9999999999999999998 5889999999999999999
Q ss_pred eeeccceecCCCCEEEeCCceEEEEeCC
Q psy7272 217 RQISEPTVLNTGSRVILGKNHVFRFNHP 244 (275)
Q Consensus 217 ~~I~~~~~L~~GDrI~lG~~~~f~f~~P 244 (275)
++|.+++.|++||+|.||++++|+|++|
T Consensus 97 ~~V~~~~~L~~GD~I~lG~~~~FrFn~P 124 (124)
T 3fm8_A 97 SSVSSPIQLHHGDRILWGNNHFFRLNLP 124 (124)
T ss_dssp EECCSCEEECTTCEEEETTTEEEEEECC
T ss_pred EEcCCcEECCCCCEEEECCCeEEEEECc
Confidence 9999999999999999999999999998
No 32
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.80 E-value=1.2e-19 Score=144.16 Aligned_cols=106 Identities=38% Similarity=0.616 Sum_probs=94.4
Q ss_pred cccCCcCCCCCCCCcc--eeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEEC
Q psy7272 139 ITPHLVNLNEDPFMSE--CLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVN 215 (275)
Q Consensus 139 ~~~~l~~l~~~P~r~s--~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VN 215 (275)
..||+++++.+|..+. ...|.|..+.+.|||.... .+||.|.++.|++.||.|...++.++|+|+ +.|+||||
T Consensus 10 ~~p~Lv~l~~d~~~s~~~~~~~~L~~~~~~IGr~r~~----~~di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vN 85 (120)
T 1wln_A 10 KLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKFD----DNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVD 85 (120)
T ss_dssp GCCEEEEECSSSCCCSSCCCEEECCSEEEECSSSCCS----TTCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEET
T ss_pred CcCEEEEeCCChhhccCccEEEEECCCCEEECCCCCC----CCcEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEEC
Confidence 3689999999998853 7889999888999974211 199999999999999999999999999999 79999999
Q ss_pred CeeeccceecCCCCEEEeCCceEEEEeCCchhh
Q psy7272 216 GRQISEPTVLNTGSRVILGKNHVFRFNHPDQVR 248 (275)
Q Consensus 216 G~~I~~~~~L~~GDrI~lG~~~~f~f~~P~~a~ 248 (275)
|++|.+++.|++||+|.||..++|+|.+|.+++
T Consensus 86 g~~i~~~~~L~~GD~I~iG~~~~~~f~~p~~~~ 118 (120)
T 1wln_A 86 GQRISETTMLQSGMRLQFGTSHVFKFVDPSGPS 118 (120)
T ss_dssp SCBCSSCEEECTTCEEEETTTEEEEEECSSCSS
T ss_pred CEEcCCCEECCCCCEEEECCceEEEEECCcccc
Confidence 999999899999999999988999999998764
No 33
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.52 E-value=3.3e-14 Score=110.11 Aligned_cols=84 Identities=24% Similarity=0.307 Sum_probs=72.6
Q ss_pred eEEEeecc-ccccCCCC-CCCCCCcceeeecCCcccccceEEEEe-CCEEEEEeC-CCCceEECCeeeccceecCCCCEE
Q psy7272 156 LIYYIKDG-RTKVGSAE-SNLPQESQDIQLSGSHIKTEHCTFENV-EGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRV 231 (275)
Q Consensus 156 Lt~~L~~~-~t~IGr~~-~~~~~~~~dI~L~~~~Is~~Hc~I~~~-e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI 231 (275)
..|.|..+ ..+|||.. . +||.+.++.|++.||.|... ++.++|+++ |.++|||||++|.++..|++||+|
T Consensus 17 ~~~~l~~~~~~~iGR~~~~------~di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~vng~~i~~~~~L~~Gd~i 90 (106)
T 3gqs_A 17 AEFHLDSGKTYIVGSDPQV------ADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVIVEGRKIEHQSTLSANQVV 90 (106)
T ss_dssp CEEEECTTCEEEEESCTTT------CSEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCEETTEECSSEEECCTTCCE
T ss_pred EEEEECCCCEEEEeECCCc------CCEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeEECCEECCCCeECCCCCEE
Confidence 34566655 45899987 4 89999999999999999998 788999999 899999999999888899999999
Q ss_pred EeCCceEEEEeCCch
Q psy7272 232 ILGKNHVFRFNHPDQ 246 (275)
Q Consensus 232 ~lG~~~~f~f~~P~~ 246 (275)
.|| ...|+|.+|.+
T Consensus 91 ~~G-~~~~~~~~~~~ 104 (106)
T 3gqs_A 91 ALG-TTLFLLVDYAA 104 (106)
T ss_dssp EET-TEEEEEEEEC-
T ss_pred EEC-CEEEEEEccCC
Confidence 999 56788987754
No 34
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.49 E-value=3.8e-14 Score=113.43 Aligned_cols=85 Identities=22% Similarity=0.327 Sum_probs=74.8
Q ss_pred eEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeeccceecCCCCEEEeC
Q psy7272 156 LIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 156 Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
..|.|.....+|||... +||.+.++.|++.||.|...++.++|+|+ |.|+|||||++|.++..|++||.|.||
T Consensus 26 ~~~~l~~~~~~IGR~~~------~di~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~~i~~~~~L~~Gd~i~iG 99 (128)
T 1r21_A 26 PHFPLSLSTCLFGRGIE------CDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDEPVRLKHGDVITII 99 (128)
T ss_dssp EEEECCSSEEEEESSTT------SSEECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTEECSSCEECCTTEEEECS
T ss_pred eEEEECCCCEEECCCCC------CCEEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCEECCCcEEcCCCCEEEEC
Confidence 45677777889999876 99999999999999999999999999999 899999999999988999999999999
Q ss_pred CceEEEEeCCchh
Q psy7272 235 KNHVFRFNHPDQV 247 (275)
Q Consensus 235 ~~~~f~f~~P~~a 247 (275)
...|+|..+..+
T Consensus 100 -~~~~~~~~~~~~ 111 (128)
T 1r21_A 100 -DRSFRYENESLQ 111 (128)
T ss_dssp -SCEEEEEEC---
T ss_pred -CEEEEEEeCCcc
Confidence 577888877443
No 35
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.47 E-value=1.8e-13 Score=107.58 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=72.2
Q ss_pred eEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeeccceecCCCCEEEeC
Q psy7272 156 LIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 156 Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
..+.|..+..+|||... ++|.+.++.|++.||.|...++.++|+|+ |.++|||||++|. +..|++||+|.||
T Consensus 24 ~~~~l~~~~~~IGR~~~------~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~-~~~L~~gd~i~iG 96 (115)
T 2xt9_B 24 SRFLLDQPTTSAGRHPD------SDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNREPVD-SAVLANGDEVQIG 96 (115)
T ss_dssp CEEEECSSEEEEESSTT------SSEECCSTTSCSSCEEEEEETTEEEEEECSCSSCEEETTEECS-EEEECTTCEEEET
T ss_pred eEEEECCCCEEECCCCC------CCEEeCCcccChhheEEEEECCEEEEEECCCCCCeEECCEEcc-eEECCCCCEEEEC
Confidence 35667777889999876 99999999999999999999999999999 8999999999997 6899999999999
Q ss_pred CceEEEEeCCc
Q psy7272 235 KNHVFRFNHPD 245 (275)
Q Consensus 235 ~~~~f~f~~P~ 245 (275)
. ..|+|..|.
T Consensus 97 ~-~~l~~~~~~ 106 (115)
T 2xt9_B 97 K-FRLVFLTGP 106 (115)
T ss_dssp T-EEEEEEC--
T ss_pred C-EEEEEEeCC
Confidence 4 678887653
No 36
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.46 E-value=1.7e-13 Score=112.73 Aligned_cols=83 Identities=24% Similarity=0.459 Sum_probs=71.7
Q ss_pred EEEee-ccccccCCCCCCCCCCcceeeecCCcccccceEEEE--------eCCEEEEEeCCCCceEECCeeecc-ceecC
Q psy7272 157 IYYIK-DGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFEN--------VEGVVTLIPFQEALCYVNGRQISE-PTVLN 226 (275)
Q Consensus 157 t~~L~-~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~--------~e~~vtL~~~s~a~t~VNG~~I~~-~~~L~ 226 (275)
.+.|. .+..+|||... |+|.|.++.|++.||.|.. .++.++|+|+|.++|||||++|.. +..|+
T Consensus 31 ~~~l~~~~~~~IGR~~~------~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~DlS~NGT~VNg~~i~~~~~~L~ 104 (151)
T 2jqj_A 31 KVEITNRNVTTIGRSRS------CDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDKSRNGTFINGNRLVKKDYILK 104 (151)
T ss_dssp EEEEECCSCEEEESSTT------SSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEECCSSCEEETTEECCSSCEEEC
T ss_pred EEEEcCCCeEEeCCCCC------CCEEECCCCCccccCEEEEecccCCcCcCCEEEEEECCCCCeEECCEEcCCCceECC
Confidence 34454 47789999876 9999999999999999998 788999999999999999999987 68999
Q ss_pred CCCEEEeCCc--eEEEEeCCc
Q psy7272 227 TGSRVILGKN--HVFRFNHPD 245 (275)
Q Consensus 227 ~GDrI~lG~~--~~f~f~~P~ 245 (275)
+||.|.||.+ ..|+|.++.
T Consensus 105 ~GD~I~lG~~~~~~f~~~~~~ 125 (151)
T 2jqj_A 105 NGDRIVFGKSCSFLFKYASSS 125 (151)
T ss_dssp SSEEEEETTTEEEEEEECSSC
T ss_pred CCCEEEECCCcEEEEEEcCCC
Confidence 9999999984 557776654
No 37
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.45 E-value=2.3e-13 Score=111.04 Aligned_cols=80 Identities=23% Similarity=0.348 Sum_probs=71.3
Q ss_pred eEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeeccceecCCCCEEEeC
Q psy7272 156 LIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 156 Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
..+.|..+..+|||... +||.|.++.|++.||.|...++.++|+|+ |.|+|||||++|. +..|++||+|.||
T Consensus 59 ~~~~L~~~~~~IGR~~~------~di~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT~VNg~~i~-~~~L~~GD~I~iG 131 (143)
T 2kb3_A 59 ARFLLDQPTTTAGRHPE------SDIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGTYVNREPRN-AQVMQTGDEIQIG 131 (143)
T ss_dssp CEEEECSSEEEESSCTT------CSBCCCCSSCCSSSEEEEEETTEEEEEESCCSSCCEETTEECS-EEECCTTEEEEET
T ss_pred eEEEeCCCCeeccCCCC------CCEEeCCCCcChhhEEEEEECCEEEEEECCCcCCeEECCEEcc-eEECCCCCEEEEC
Confidence 34667777889999876 99999999999999999999999999999 8999999999997 6899999999999
Q ss_pred CceEEEEeC
Q psy7272 235 KNHVFRFNH 243 (275)
Q Consensus 235 ~~~~f~f~~ 243 (275)
. ..|+|..
T Consensus 132 ~-~~l~f~~ 139 (143)
T 2kb3_A 132 K-FRLVFLA 139 (143)
T ss_dssp T-EEEEEEE
T ss_pred C-EEEEEEe
Confidence 5 6666753
No 38
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.45 E-value=2.3e-13 Score=104.16 Aligned_cols=79 Identities=16% Similarity=0.251 Sum_probs=69.8
Q ss_pred eEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeeccceecCCCCEEEeC
Q psy7272 156 LIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 156 Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
..+.|..+...|||... ++|.+.++.|++.||.|...++.++|+++ |.++|||||+++. +..|++||+|.||
T Consensus 16 ~~~~l~~~~~~IGR~~~------~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~-~~~L~~gd~i~iG 88 (100)
T 3po8_A 16 RTYQLREGSNIIGRGQD------AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQ-EWQLADGDVIRLG 88 (100)
T ss_dssp CEEECCSEEEEEESSTT------CSEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTEECS-EEECCTTCEEEET
T ss_pred cEEEECCCCEEEeCCCC------CCEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCEECc-eEECCCCCEEEEC
Confidence 45667777789999876 99999999999999999999999999999 8999999999997 6899999999999
Q ss_pred CceEEEEe
Q psy7272 235 KNHVFRFN 242 (275)
Q Consensus 235 ~~~~f~f~ 242 (275)
. ..|+|.
T Consensus 89 ~-~~~~~~ 95 (100)
T 3po8_A 89 H-SEIIVR 95 (100)
T ss_dssp T-EEEEEE
T ss_pred C-EEEEEE
Confidence 6 555553
No 39
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.43 E-value=4.8e-13 Score=111.37 Aligned_cols=82 Identities=21% Similarity=0.314 Sum_probs=72.9
Q ss_pred eEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeeccceecCCCCEEEeC
Q psy7272 156 LIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 156 Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
..|.|.....+|||... |+|.|.++.|++.||.|...++.++|+|+ |.|+|||||++|. +..|++||+|.||
T Consensus 68 ~~~~L~~~~~~IGR~~~------~di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~VNg~~i~-~~~L~~GD~I~iG 140 (162)
T 2kfu_A 68 SRFLLDQAITSAGRHPD------SDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVD-SAVLANGDEVQIG 140 (162)
T ss_dssp CEEETTSSEEEEESCSS------SSEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEETTBCCS-EEECCSSCEEEET
T ss_pred eEEEECCCCEEECCCCC------CCEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEECCEEcc-eEECCCCCEEEEC
Confidence 35677777889999876 99999999999999999999999999999 8999999999997 6899999999999
Q ss_pred CceEEEEeCCc
Q psy7272 235 KNHVFRFNHPD 245 (275)
Q Consensus 235 ~~~~f~f~~P~ 245 (275)
. ..|+|..+.
T Consensus 141 ~-~~l~f~~~~ 150 (162)
T 2kfu_A 141 K-FRLVFLTGP 150 (162)
T ss_dssp T-EEEEEECSC
T ss_pred C-EEEEEEeCC
Confidence 5 677776554
No 40
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.40 E-value=7.7e-13 Score=108.61 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=70.9
Q ss_pred EEeeccccccCCCCCCCCCCcceeeecCCc---------ccccceEEEEeCC-----EEEEEeCCCCceEECCeeec--c
Q psy7272 158 YYIKDGRTKVGSAESNLPQESQDIQLSGSH---------IKTEHCTFENVEG-----VVTLIPFQEALCYVNGRQIS--E 221 (275)
Q Consensus 158 ~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~---------Is~~Hc~I~~~e~-----~vtL~~~s~a~t~VNG~~I~--~ 221 (275)
+.|.....+|||... |+|.+.++. |++.||.|...++ .++|++.|.|+|||||++|. .
T Consensus 43 i~L~~~~~~IGR~~~------~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~StNGT~VNg~~i~~~~ 116 (149)
T 1gxc_A 43 LECVNDNYWFGRDKS------CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGK 116 (149)
T ss_dssp EEECSSEEEEESSTT------CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEECCSSCEEETTEECCTTC
T ss_pred EEECCCCEEecCCCC------CCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEECCCCCeEECCEECCCCC
Confidence 456667788999876 999999885 9999999998877 89999999999999999997 5
Q ss_pred ceecCCCCEEEeCCc--eEEEEeCC
Q psy7272 222 PTVLNTGSRVILGKN--HVFRFNHP 244 (275)
Q Consensus 222 ~~~L~~GDrI~lG~~--~~f~f~~P 244 (275)
+..|++||+|.||.. ..|.|.+.
T Consensus 117 ~~~L~~GD~I~lG~~~~~~f~f~d~ 141 (149)
T 1gxc_A 117 RRPLNNNSEIALSLSRNKVFVFFDL 141 (149)
T ss_dssp EEECCTTEEEEESSTTCEEEEEEET
T ss_pred eEECCCCCEEEECCCCCeEEEEEEC
Confidence 789999999999975 56888765
No 41
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.38 E-value=1.8e-12 Score=104.29 Aligned_cols=80 Identities=15% Similarity=0.312 Sum_probs=69.0
Q ss_pred eeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEe---CC--EEEEEeC------CCCceEECCeeeccce
Q psy7272 155 CLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENV---EG--VVTLIPF------QEALCYVNGRQISEPT 223 (275)
Q Consensus 155 ~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~---e~--~vtL~~~------s~a~t~VNG~~I~~~~ 223 (275)
...+.|.....+|||... |||.+.++.||+.||.|... ++ .++|+++ |.|+|||||++|.+ .
T Consensus 22 ~~~~~l~~~~~~IGR~~~------~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT~vNg~~i~~-~ 94 (131)
T 3hx1_A 22 RREVLLTETFYTIGRSPR------ADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGLMINGKKVQE-H 94 (131)
T ss_dssp EEEEEECSSEEEEESSTT------SSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCEEETTEEESE-E
T ss_pred cEEEEECCCCEEECCCCC------CCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCceEECCEEeEe-E
Confidence 456778877889999987 99999999999999999876 33 4999998 89999999999976 8
Q ss_pred ecCCCCEEEeCCceEEEE
Q psy7272 224 VLNTGSRVILGKNHVFRF 241 (275)
Q Consensus 224 ~L~~GDrI~lG~~~~f~f 241 (275)
.|++||.|.||...+++|
T Consensus 95 ~L~~GD~I~iG~~~~~~~ 112 (131)
T 3hx1_A 95 IIQTGDEIVMGPQVSVRY 112 (131)
T ss_dssp ECCTTCEEECSTTCEEEE
T ss_pred ECCCCCEEEECCEEEEEE
Confidence 999999999998777555
No 42
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.37 E-value=7.3e-13 Score=104.03 Aligned_cols=83 Identities=16% Similarity=0.248 Sum_probs=71.2
Q ss_pred EEEeeccccccCCCCCCCCCCcceeeecCC-cccccceEEEEe--CCEEEEEeCCCCceEECCeeecc--ceecCCCCEE
Q psy7272 157 IYYIKDGRTKVGSAESNLPQESQDIQLSGS-HIKTEHCTFENV--EGVVTLIPFQEALCYVNGRQISE--PTVLNTGSRV 231 (275)
Q Consensus 157 t~~L~~~~t~IGr~~~~~~~~~~dI~L~~~-~Is~~Hc~I~~~--e~~vtL~~~s~a~t~VNG~~I~~--~~~L~~GDrI 231 (275)
.+.|.....+|||... ++|.+.+. .|++.||.|... ++.++|++.|.++|||||++|.. +..|++||.|
T Consensus 18 ~~~l~~~~~~iGR~~~------~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D~S~NGt~vng~~l~~~~~~~L~~GD~i 91 (116)
T 1lgp_A 18 HVLLRKREWTIGRRRG------CDLSFPSNKLVSGDHCRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVI 91 (116)
T ss_dssp CEEECSSEEEEESSTT------SSEECTTCTTSCTTCEEEEECTTTCCEEEEECSSSCCCCCCCCCCCSSCCCCCTTCEE
T ss_pred EEEECCCCEEECCCCC------CCEEeCCCCCCChhHeEEEEECCCCeEEEEECCcCCcEECCEEcCCCCcEECCCCCEE
Confidence 3456677788999986 99999864 999999999986 78999999889999999999974 7899999999
Q ss_pred EeCCc-------eEEEEeCCc
Q psy7272 232 ILGKN-------HVFRFNHPD 245 (275)
Q Consensus 232 ~lG~~-------~~f~f~~P~ 245 (275)
.||.. ..|.|.++.
T Consensus 92 ~~G~~~~~~~~~~~f~f~~~~ 112 (116)
T 1lgp_A 92 YLVYRKNEPEHNVAYLYESLS 112 (116)
T ss_dssp EEECCSSCGGGCEEEECCCSC
T ss_pred EEeccCCCCCceEEEEEEccc
Confidence 99974 468887764
No 43
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.36 E-value=9.8e-13 Score=103.64 Aligned_cols=75 Identities=19% Similarity=0.281 Sum_probs=65.8
Q ss_pred Eeec-cccccCCC-CCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeecc--ceecCCCCEEEe
Q psy7272 159 YIKD-GRTKVGSA-ESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISE--PTVLNTGSRVIL 233 (275)
Q Consensus 159 ~L~~-~~t~IGr~-~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~--~~~L~~GDrI~l 233 (275)
.|.. ....|||. .. ++|.+.++.|++.||.|...++.++|+|+ |.|+|||||++|.. +..|++||+|.|
T Consensus 28 ~l~~~~~~~iGR~~~~------~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vng~~l~~~~~~~L~~gd~i~l 101 (118)
T 1uht_A 28 DYKPGSTIRVGRIVRG------NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKL 101 (118)
T ss_dssp CBCTTCCEEEESSSTT------CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESSSBCCTTCEEECCTTEEEEE
T ss_pred EECCCCEEEEcCCCCC------CCEEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEECCEECCCCCeEEcCCCCEEEE
Confidence 4444 35689998 55 99999999999999999999999999999 89999999999975 789999999999
Q ss_pred CCceEE
Q psy7272 234 GKNHVF 239 (275)
Q Consensus 234 G~~~~f 239 (275)
|...+.
T Consensus 102 G~~~~~ 107 (118)
T 1uht_A 102 GEYTSI 107 (118)
T ss_dssp TTTEEE
T ss_pred CCeEEE
Confidence 987643
No 44
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.36 E-value=1.8e-12 Score=107.22 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=70.6
Q ss_pred eeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeeccceecCCCCEEEe
Q psy7272 155 CLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 155 ~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
...+.|.....+|||... |||.|.++.|++.||.|...++.++|+|+ |.|+|||||++|. +..|++||+|.|
T Consensus 77 g~~~~L~~~~~~IGR~~~------~dI~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~~i~-~~~L~~GD~I~l 149 (157)
T 3oun_A 77 GRTYQLREGSNIIGRGQD------AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQ-EWQLADGDVIRL 149 (157)
T ss_dssp CCEEECCSEEEEEESSTT------CSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTEECS-EEECCTTCEEEE
T ss_pred CeEEEECCCcEEEEeCCC------CCEEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCEECc-eEECCCCCEEEE
Confidence 345667777789999876 99999999999999999999999999999 8999999999996 688999999999
Q ss_pred CCceEEEE
Q psy7272 234 GKNHVFRF 241 (275)
Q Consensus 234 G~~~~f~f 241 (275)
| ...|+|
T Consensus 150 G-~~~l~f 156 (157)
T 3oun_A 150 G-HSEIIV 156 (157)
T ss_dssp T-TEEEEE
T ss_pred C-CEEEEE
Confidence 9 466776
No 45
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.35 E-value=1.8e-12 Score=104.45 Aligned_cols=82 Identities=11% Similarity=0.092 Sum_probs=70.8
Q ss_pred eEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEe--CCEEEEEeC-CCCceEECCeee----ccceecCCC
Q psy7272 156 LIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENV--EGVVTLIPF-QEALCYVNGRQI----SEPTVLNTG 228 (275)
Q Consensus 156 Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~--e~~vtL~~~-s~a~t~VNG~~I----~~~~~L~~G 228 (275)
..+.|..+..+|||... |||.+.++.|++.||.|... ++.++|+|+ |.|+|||||++| ..+..|++|
T Consensus 38 ~~~~L~~~~~~IGR~~~------~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~~i~l~~~~~~~L~~G 111 (132)
T 3va4_A 38 RDFPLYLGKNVVGRSPD------CSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKPPRVLPPGVSHRLRDQ 111 (132)
T ss_dssp EEEEECSEEEEEESSTT------SSEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTTTEEECTTCCEECCTT
T ss_pred eEEEECCCCEEEccCCC------CCEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCEEcccCCCCEEECCCC
Confidence 45667777889999876 99999999999999999986 588999999 899999999996 357889999
Q ss_pred CEEEeCCceEEEEeCC
Q psy7272 229 SRVILGKNHVFRFNHP 244 (275)
Q Consensus 229 DrI~lG~~~~f~f~~P 244 (275)
|+|.|| ...|+|...
T Consensus 112 D~I~lG-~~~l~f~~~ 126 (132)
T 3va4_A 112 ELILFA-DFPCQYHRL 126 (132)
T ss_dssp CEEEET-TEEEEEEEC
T ss_pred CEEEEC-CEEEEEEEC
Confidence 999999 566777643
No 46
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.33 E-value=4e-12 Score=101.54 Aligned_cols=77 Identities=16% Similarity=0.260 Sum_probs=67.0
Q ss_pred ccccCCCCCCCCCCcceeeecCC-cccccceEEEE-eCCEEEEEeCCCCceEECCeeecc--ceecCCCCEEEeCCce--
Q psy7272 164 RTKVGSAESNLPQESQDIQLSGS-HIKTEHCTFEN-VEGVVTLIPFQEALCYVNGRQISE--PTVLNTGSRVILGKNH-- 237 (275)
Q Consensus 164 ~t~IGr~~~~~~~~~~dI~L~~~-~Is~~Hc~I~~-~e~~vtL~~~s~a~t~VNG~~I~~--~~~L~~GDrI~lG~~~-- 237 (275)
..+|||... ++|.+.++ .|++.||.|.. .++.++|+|+|.++|||||.+|.. +..|++||.|.||...
T Consensus 37 ~~~IGR~~~------~di~l~~~~~vSr~Ha~i~~~~~g~~~l~DlS~NGT~vNg~~l~~~~~~~L~~Gd~I~lG~~~~~ 110 (127)
T 1g6g_A 37 VWTFGRNPA------CDYHLGNISRLSNKHFQILLGEDGNLLLNDISTNGTWLNGQKVEKNSNQLLSQGDEITVGVGVES 110 (127)
T ss_dssp EEEEESSTT------SSEECCSCTTSCSSCEEEEECTTSCEEEEECCSSCCEETTEECCTTCCEECCTTCEEEECTTSGG
T ss_pred CEEECCCCC------CCEEeCCCCCCChhHeEEEECCCCcEEEEECCcCCeEECCEEcCCCCeEEcCCCCEEEECCCccC
Confidence 567899887 99999997 59999999999 588999999999999999999975 6899999999999764
Q ss_pred ---EEEEeCCch
Q psy7272 238 ---VFRFNHPDQ 246 (275)
Q Consensus 238 ---~f~f~~P~~ 246 (275)
-|.|..|..
T Consensus 111 ~~i~f~~~~~~~ 122 (127)
T 1g6g_A 111 DILSLVIFINDK 122 (127)
T ss_dssp GCEEEEEEECHH
T ss_pred ceEEEEEEeCch
Confidence 366666643
No 47
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.33 E-value=3.3e-12 Score=102.57 Aligned_cols=73 Identities=15% Similarity=0.198 Sum_probs=60.9
Q ss_pred cccccCCCCCCCCCCcceeeecCCcccccceEEEE-----------eCCEEEEEeC-CCCceEECCeeecc--ceecCCC
Q psy7272 163 GRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFEN-----------VEGVVTLIPF-QEALCYVNGRQISE--PTVLNTG 228 (275)
Q Consensus 163 ~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~-----------~e~~vtL~~~-s~a~t~VNG~~I~~--~~~L~~G 228 (275)
...+|||... |||.|.++.||+.||.|.+ .++.++|.|+ |.|+|||||++|.. ++.|++|
T Consensus 41 ~~~~IGR~~~------~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~Dl~StNGT~vNg~ri~~~~~~~L~~G 114 (130)
T 4h87_A 41 SYCLFGRLSG------CDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLYDLGSTHGTFLNKTRIPPRTYCRVHVG 114 (130)
T ss_dssp SEEEEESSTT------SSEECCCTTSCSSCEEEEEBCCCCCC------CCEEEEECSCSSCEEETTEECCTTCCEECCTT
T ss_pred ceEEEcCCcC------CCEEeCCCCcchhcEEEEEecccCccceeccCCcceEeeCCCCCceEECCEECCCCceeECCCC
Confidence 3458999876 9999999999999999964 3567999998 99999999999964 5789999
Q ss_pred CEEEeCCce-EEEE
Q psy7272 229 SRVILGKNH-VFRF 241 (275)
Q Consensus 229 DrI~lG~~~-~f~f 241 (275)
|.|.||... .|.|
T Consensus 115 D~I~~G~str~yvl 128 (130)
T 4h87_A 115 HVVRFGGSTRLFIL 128 (130)
T ss_dssp CEEEETTCSEEEEE
T ss_pred CEEEECCceEEEEE
Confidence 999999644 4554
No 48
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.32 E-value=5.6e-12 Score=118.27 Aligned_cols=84 Identities=18% Similarity=0.298 Sum_probs=75.4
Q ss_pred eeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCEEEEEeC-CCCceEECCeeeccceecCCCCEEEe
Q psy7272 155 CLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPF-QEALCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 155 ~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~-s~a~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
.-.+.|..+..+|||... |||.+.++.||+.||.|...++.++|+|+ |.|+|||||++|.++..|++||.|.|
T Consensus 298 g~~~~l~~~~~~iGR~~~------~di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~~~~~L~~gd~i~~ 371 (388)
T 2ff4_A 298 GRGYPLQAAATRIGRLHD------NDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRSAVTLNDGDHIRI 371 (388)
T ss_dssp CCEEECCSSEEEEESSTT------SSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTEECSSEEEECTTCEEEE
T ss_pred CcEEEECCCCEEEecCCC------CeEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCEECCCceECCCCCEEEE
Confidence 345677778889999887 99999999999999999999999999998 89999999999988899999999999
Q ss_pred CCceEEEEeCCc
Q psy7272 234 GKNHVFRFNHPD 245 (275)
Q Consensus 234 G~~~~f~f~~P~ 245 (275)
| ...|+|..+.
T Consensus 372 G-~~~~~~~~~~ 382 (388)
T 2ff4_A 372 C-DHEFTFQISA 382 (388)
T ss_dssp T-TEEEEEECSC
T ss_pred C-CEEEEEEeCC
Confidence 9 5778887653
No 49
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.32 E-value=4.3e-12 Score=105.80 Aligned_cols=78 Identities=15% Similarity=0.257 Sum_probs=67.6
Q ss_pred ccccCCCCCCCCCCcceeeecCC-cccccceEEEE-eCCEEEEEeCCCCceEECCeeecc--ceecCCCCEEEeCCce--
Q psy7272 164 RTKVGSAESNLPQESQDIQLSGS-HIKTEHCTFEN-VEGVVTLIPFQEALCYVNGRQISE--PTVLNTGSRVILGKNH-- 237 (275)
Q Consensus 164 ~t~IGr~~~~~~~~~~dI~L~~~-~Is~~Hc~I~~-~e~~vtL~~~s~a~t~VNG~~I~~--~~~L~~GDrI~lG~~~-- 237 (275)
...|||... +||.|.++ .|++.||.|.. .++.++|+|+|.|+|||||.+|.. +..|++||.|.||...
T Consensus 65 ~~~IGR~~~------~di~l~d~~~vSr~Ha~I~~~~~g~~~l~DlS~NGT~vNg~~i~~~~~~~L~~GD~I~iG~~~~~ 138 (164)
T 1g3g_A 65 VWTFGRNPA------CDYHLGNISRLSNKHFQILLGEDGNLLLNDISTNGTWLNGQKVEKNSNQLLSQGDEITVGVGVES 138 (164)
T ss_dssp EEEEESSSS------SSEECCCCTTTTSSCEEEEECSTTCEEEEECCSSCEEETTEEECTTEEEECCTTCEEEESCSSTT
T ss_pred cEEECCCCC------CCEEeCCcCCcChhHEEEEECCCCCEEEEECCCCCeEECCEEcCCCCceEcCCCCEEEECCCCCC
Confidence 568999877 99999998 69999999999 589999999999999999999976 6899999999999852
Q ss_pred ---EEEEeCCchh
Q psy7272 238 ---VFRFNHPDQV 247 (275)
Q Consensus 238 ---~f~f~~P~~a 247 (275)
-|.|..|...
T Consensus 139 ~~~~f~~~~~~~~ 151 (164)
T 1g3g_A 139 DILSLVIFINDKF 151 (164)
T ss_dssp SCEEEEEEECHHH
T ss_pred CcEEEEEEeCchh
Confidence 4777767543
No 50
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.30 E-value=4.4e-12 Score=102.83 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=67.5
Q ss_pred EEEeecc-----ccccCCCCCCCCCCcceeeecCCcccccceEEEEeCC--EEEEEeC-CCCceEECCeeecc-------
Q psy7272 157 IYYIKDG-----RTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEG--VVTLIPF-QEALCYVNGRQISE------- 221 (275)
Q Consensus 157 t~~L~~~-----~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~--~vtL~~~-s~a~t~VNG~~I~~------- 221 (275)
.|.|..+ ..+|||... ++|.+.++.|++.||.|...++ .++|+++ |.|+|||||++|..
T Consensus 21 ~~~l~~~~~~~~~~~IGR~~~------~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~~i~~~~~~~~~ 94 (139)
T 1mzk_A 21 QHAVNSTSSSKLPVKLGRVSP------SDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGSRK 94 (139)
T ss_dssp EEEECTTCSTTCSEEEESSSS------CSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTEESSCCCTTTCC
T ss_pred EEEecCCCCccceEEeeCCCC------CCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCEECcCccccccc
Confidence 5566654 568999887 8999999999999999998874 7999999 89999999999984
Q ss_pred ---ceecCCCCEEEeCCceEEEEe
Q psy7272 222 ---PTVLNTGSRVILGKNHVFRFN 242 (275)
Q Consensus 222 ---~~~L~~GDrI~lG~~~~f~f~ 242 (275)
+..|++||.|.||... |+|.
T Consensus 95 ~~~~~~L~~GD~I~iG~~~-~~~~ 117 (139)
T 1mzk_A 95 WGNPVELASDDIITLGTTT-KVYV 117 (139)
T ss_dssp CCCCEECCTTEEEECSSSC-EEEE
T ss_pred CCceEECCCCCEEEECCEE-EEEE
Confidence 7899999999999654 4554
No 51
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.30 E-value=4.9e-12 Score=104.84 Aligned_cols=79 Identities=15% Similarity=0.299 Sum_probs=67.2
Q ss_pred EEEeeccc--cccCCCCCCCCCCcceeeecCCcccccceEEEEeC---------------CEEEEEeCCCCceEECCeee
Q psy7272 157 IYYIKDGR--TKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVE---------------GVVTLIPFQEALCYVNGRQI 219 (275)
Q Consensus 157 t~~L~~~~--t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e---------------~~vtL~~~s~a~t~VNG~~I 219 (275)
.+.|..+. .+|||... |+|.+.++.|++.||.|.... +.++|+|.|.|+|||||++|
T Consensus 19 ~i~L~~~~~~~~IGR~~~------~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~DlStNGT~VNg~ri 92 (158)
T 1dmz_A 19 SLEIQQGVNPFFIGRSED------CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTNVSYLNNNRM 92 (158)
T ss_dssp CEEETTSCSCEEEESSTT------SSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEECSTTCCEETTEEC
T ss_pred EEEEcCCCceEEECCCCC------CCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEECCcCCeEECCEEc
Confidence 34455544 78999876 999999999999999999876 78999999999999999999
Q ss_pred cc--ceecCCCCEEEe-----CCceE-EEE
Q psy7272 220 SE--PTVLNTGSRVIL-----GKNHV-FRF 241 (275)
Q Consensus 220 ~~--~~~L~~GDrI~l-----G~~~~-f~f 241 (275)
.. +..|++||+|.| |...+ |++
T Consensus 93 ~~~~~~~L~~GD~I~l~~d~~G~~~l~f~~ 122 (158)
T 1dmz_A 93 IQGTKFLLQDGDEIKIIWDKNNKFVIGFKV 122 (158)
T ss_dssp CSSEEEECCSSCCEESCCCTTTTCCCCEEE
T ss_pred CCCceEEcCCCCEEEEeecCCCCEEEEEEE
Confidence 76 689999999999 86543 444
No 52
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.29 E-value=1.8e-12 Score=105.21 Aligned_cols=82 Identities=13% Similarity=0.182 Sum_probs=69.1
Q ss_pred EEEeecc-ccccCCCCCCCCCCcceeeecCCcccccceEEEEeC--CEEEEEeC-CCCceEECCeeec--cceecCCCCE
Q psy7272 157 IYYIKDG-RTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVE--GVVTLIPF-QEALCYVNGRQIS--EPTVLNTGSR 230 (275)
Q Consensus 157 t~~L~~~-~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e--~~vtL~~~-s~a~t~VNG~~I~--~~~~L~~GDr 230 (275)
.+.|... ..+|||.... +||.+.++.|++.||.|...+ +.++|+|+ |.|+|||||++|. ++..|++||.
T Consensus 48 ~~~l~~~~~~~IGR~~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~vNg~~l~~~~~~~L~~gd~ 122 (140)
T 2jpe_A 48 KLIIDEKKYYLFGRNPDL-----CDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDST 122 (140)
T ss_dssp EECCSSCSBCCBSSCTTT-----SSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEESSSCEECSSSCCEECTTCC
T ss_pred EEEeCCCCeEEecCCCcc-----CCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeEECCEECCCCccEECCCCCE
Confidence 4556654 4889998752 799999999999999999987 89999998 9999999999998 6889999999
Q ss_pred EEeCCceE-EEEeC
Q psy7272 231 VILGKNHV-FRFNH 243 (275)
Q Consensus 231 I~lG~~~~-f~f~~ 243 (275)
|.||...+ |+|..
T Consensus 123 i~~G~~~~~f~~~~ 136 (140)
T 2jpe_A 123 VSFGASTRAYTLRE 136 (140)
T ss_dssp BBCSSCCCCBCCBC
T ss_pred EEECCceEEEEEec
Confidence 99997554 54443
No 53
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.27 E-value=1e-11 Score=100.57 Aligned_cols=81 Identities=17% Similarity=0.295 Sum_probs=68.7
Q ss_pred EEee-ccccccCCCCCCCCCCcceeeecCCc----ccccceEEEE-eCCEEEEEeC-CCCceEECCeeecc--ceecCCC
Q psy7272 158 YYIK-DGRTKVGSAESNLPQESQDIQLSGSH----IKTEHCTFEN-VEGVVTLIPF-QEALCYVNGRQISE--PTVLNTG 228 (275)
Q Consensus 158 ~~L~-~~~t~IGr~~~~~~~~~~dI~L~~~~----Is~~Hc~I~~-~e~~vtL~~~-s~a~t~VNG~~I~~--~~~L~~G 228 (275)
+.|. ....+|||... ++|.+.++. ||+.||.|.. .++.++|+|+ |.|+|||||.+|.. +..|++|
T Consensus 22 ~~l~~~~~~~IGR~~~------~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~l~~~~~~~L~~G 95 (138)
T 2pie_A 22 LLLEDGCEVTVGRGFG------VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQG 95 (138)
T ss_dssp EEECTTCCEEEESSSS------SSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSCSSCEEETTEECCTTCCEECCTT
T ss_pred EEecCCCeEEECCCCC------CCEEeCCCCcCCCCChhHeEEEEcCCCcEEEEECCCCCCeEECCEEcCCCCcEECCCC
Confidence 3343 55678999886 999999998 9999999998 6888999999 99999999999976 7899999
Q ss_pred CEEEeCCc------eEEEEeCC
Q psy7272 229 SRVILGKN------HVFRFNHP 244 (275)
Q Consensus 229 DrI~lG~~------~~f~f~~P 244 (275)
|.|.||.. ..|.|...
T Consensus 96 D~I~lG~~~~~~~~~~f~~~~~ 117 (138)
T 2pie_A 96 DYIQLGVPLENKENAEYEYEVT 117 (138)
T ss_dssp CEEEESCCCTTCSSCSEEEEEE
T ss_pred CEEEECCCCCCCceEEEEEEec
Confidence 99999972 34777544
No 54
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.25 E-value=8.1e-15 Score=112.35 Aligned_cols=82 Identities=32% Similarity=0.320 Sum_probs=63.2
Q ss_pred ccccccchhhHHHHHHHhhhc-ccCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEE
Q psy7272 119 GANINKSLTTLGKVISALAEI-TPHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFEN 197 (275)
Q Consensus 119 ~~~IN~SL~~Lg~vi~al~~~-~~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~ 197 (275)
+++||+||++||+||.||+++ .+|+ |||+|+||++|++.++ |++.+.++ ++|.+....+.
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~~~hv------PyRdSkLT~lL~dsLg--Gnskt~mi---~~vsp~~~~~~-------- 61 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGTKTHV------PYRDSKMTRILQDSLD--GNCRTTIV---ICCSPSVFNEA-------- 61 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTCCSSC------CGGGCHHHHHTHHHHH--SSEEEEEE---EEECCBGGGHH--------
T ss_pred CCcchHHHHHHHHHHHHHHhcCCCCC------CCccchHHHHHHHHhc--CCCceeEE---EEeCcccchHH--------
Confidence 468999999999999999986 3565 9999999999999988 88877665 55555544443
Q ss_pred eCCEEEEEeCCCCceEECCeeec
Q psy7272 198 VEGVVTLIPFQEALCYVNGRQIS 220 (275)
Q Consensus 198 ~e~~vtL~~~s~a~t~VNG~~I~ 220 (275)
++..||+++++++.+.|...++
T Consensus 62 -ETl~TL~fA~rak~i~~~~~~n 83 (100)
T 2kin_B 62 -ETKSTLMFGQRAKTIKNTVSVN 83 (100)
T ss_dssp -HHHHHHHHHHHHHTCEEEECCE
T ss_pred -HHHHHHHHHHHHHhccCcceec
Confidence 5566777777777666655554
No 55
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.24 E-value=7.3e-12 Score=102.29 Aligned_cols=72 Identities=19% Similarity=0.275 Sum_probs=63.7
Q ss_pred EEeeccccccCCCCCCCCCCcceeeecCCc----ccccceEEEE-eCCEEEEEeC-CCCceEECCeeecc--ceecCCCC
Q psy7272 158 YYIKDGRTKVGSAESNLPQESQDIQLSGSH----IKTEHCTFEN-VEGVVTLIPF-QEALCYVNGRQISE--PTVLNTGS 229 (275)
Q Consensus 158 ~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~----Is~~Hc~I~~-~e~~vtL~~~-s~a~t~VNG~~I~~--~~~L~~GD 229 (275)
+++.....+|||... ++|.+.++. |++.||.|.. .++.++|+|+ |.|+|||||++|.. +..|++||
T Consensus 31 ~l~~~~~~~IGR~~~------~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~i~~~~~~~L~~GD 104 (145)
T 2csw_A 31 LLEDGCEVTVGRGFG------VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGD 104 (145)
T ss_dssp ECCTTCCEEEESSTT------SSEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSSCSSCEEESSCBCCBTCCEECCSSC
T ss_pred EeCCCCcEEECCCCC------CCEEECCCCcCCCCChhHeEEEEcCCCeEEEEECCCCCCeEECCEECCCCccEECCCCC
Confidence 334455678999886 999999998 9999999999 5888999998 99999999999976 78999999
Q ss_pred EEEeCC
Q psy7272 230 RVILGK 235 (275)
Q Consensus 230 rI~lG~ 235 (275)
.|.||.
T Consensus 105 ~I~iG~ 110 (145)
T 2csw_A 105 YIQLGV 110 (145)
T ss_dssp CEEESC
T ss_pred EEEECC
Confidence 999997
No 56
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.24 E-value=5.2e-12 Score=107.00 Aligned_cols=79 Identities=16% Similarity=0.313 Sum_probs=67.3
Q ss_pred EEEeeccc--cccCCCCCCCCCCcceeeecCCcccccceEEEEeC---------------CEEEEEeCCCCceEECCeee
Q psy7272 157 IYYIKDGR--TKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVE---------------GVVTLIPFQEALCYVNGRQI 219 (275)
Q Consensus 157 t~~L~~~~--t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e---------------~~vtL~~~s~a~t~VNG~~I 219 (275)
.+.|..+. .+|||... |+|.+.++.|++.||.|.... +.++|+|+|.|+|||||++|
T Consensus 43 ~i~L~~~~~~~~IGR~~~------~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~~~~~l~DlStNGT~VNg~ri 116 (182)
T 1qu5_A 43 SLEIQQGVNPFFIGRSED------CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTNVSYLNNNRM 116 (182)
T ss_dssp CCCBTTCCSSEEESSSTT------SSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSCCEEEECCCSSSCCEETTEEC
T ss_pred EEEEcCCCceEEECCCCC------CCEEECCCCcChHHeEEEEecCccccccccccccccceEEEEECCcCCeEECCEEc
Confidence 34455544 78999876 999999999999999999877 88999999999999999999
Q ss_pred cc--ceecCCCCEEEe-----CCceEEEEe
Q psy7272 220 SE--PTVLNTGSRVIL-----GKNHVFRFN 242 (275)
Q Consensus 220 ~~--~~~L~~GDrI~l-----G~~~~f~f~ 242 (275)
.. +..|++||+|.| |. ..|.|.
T Consensus 117 ~~~~~~~L~~GD~I~l~~d~~G~-~~l~f~ 145 (182)
T 1qu5_A 117 IQGTKFLLQDGDEIKIIWDKNNK-FVIGFK 145 (182)
T ss_dssp CSSEEEECCTTBCCEEEEEGGGT-EEEECC
T ss_pred CCCcceEcCCCCEEEEEEcCCCC-EEEEEE
Confidence 76 689999999999 85 445553
No 57
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.11 E-value=8e-11 Score=97.50 Aligned_cols=75 Identities=15% Similarity=0.132 Sum_probs=61.2
Q ss_pred ccccccCCCCCCC---------CCCcceeeecCCcccccceEEEEeCCE----EEEEeC-CCCceEECCeeecc--ceec
Q psy7272 162 DGRTKVGSAESNL---------PQESQDIQLSGSHIKTEHCTFENVEGV----VTLIPF-QEALCYVNGRQISE--PTVL 225 (275)
Q Consensus 162 ~~~t~IGr~~~~~---------~~~~~dI~L~~~~Is~~Hc~I~~~e~~----vtL~~~-s~a~t~VNG~~I~~--~~~L 225 (275)
.....|||..... ....|||.+..+.||+.||.|...++. ++|.++ |.|+|||||++|.. +..|
T Consensus 55 ~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~~~~~l~Dl~StNGT~VNg~ri~~~~~~~L 134 (158)
T 3els_A 55 RSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVIPGARYIEL 134 (158)
T ss_dssp CSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTEEEEEEEECSCSSCCEETTEECCTTCCEEC
T ss_pred CCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCeeEEEEEeCCCCCccEECCEEcCCCceEEc
Confidence 3456889985200 001299999999999999999987765 999999 99999999999975 6889
Q ss_pred CCCCEEEeCCc
Q psy7272 226 NTGSRVILGKN 236 (275)
Q Consensus 226 ~~GDrI~lG~~ 236 (275)
++||+|.||..
T Consensus 135 ~~GD~I~~G~s 145 (158)
T 3els_A 135 RSGDVLTLSEF 145 (158)
T ss_dssp CTTEEEESSSC
T ss_pred CCCCEEEECCC
Confidence 99999999954
No 58
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.07 E-value=2.3e-10 Score=98.10 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=63.0
Q ss_pred EEEe-eccccccCCCCCCC---------CCCcceeeecCCcccccceEEEEeCC----EEEEEeC-CCCceEECCeeecc
Q psy7272 157 IYYI-KDGRTKVGSAESNL---------PQESQDIQLSGSHIKTEHCTFENVEG----VVTLIPF-QEALCYVNGRQISE 221 (275)
Q Consensus 157 t~~L-~~~~t~IGr~~~~~---------~~~~~dI~L~~~~Is~~Hc~I~~~e~----~vtL~~~-s~a~t~VNG~~I~~ 221 (275)
++.| .....+|||..... -...|||.+..+.||+.||.|....+ .++|.++ |.|+|||||++|..
T Consensus 96 ~~~L~~~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~~~~~l~DLgStNGTfVNG~rI~~ 175 (205)
T 3elv_A 96 RYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVIPG 175 (205)
T ss_dssp EEECSSCSEEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTEEEEEEEECSCSSCCEETTEECCB
T ss_pred EEEecCCCceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCceeEEEEeCCCCCCCeECCEECCC
Confidence 3444 44567899985300 01129999999999999999987643 4899999 99999999999975
Q ss_pred --ceecCCCCEEEeCCce
Q psy7272 222 --PTVLNTGSRVILGKNH 237 (275)
Q Consensus 222 --~~~L~~GDrI~lG~~~ 237 (275)
+..|++||.|.||...
T Consensus 176 ~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 176 ARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp TSCEECCTTCEEESSSSG
T ss_pred CceeECCCCCEEEECCCC
Confidence 3689999999999644
No 59
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=98.92 E-value=2.4e-12 Score=101.51 Aligned_cols=78 Identities=32% Similarity=0.308 Sum_probs=60.5
Q ss_pred ccchhhHHHHHHHhhhcc-cCCcCCCCCCCCcceeEEEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeCCE
Q psy7272 123 NKSLTTLGKVISALAEIT-PHLVNLNEDPFMSECLIYYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEGV 201 (275)
Q Consensus 123 N~SL~~Lg~vi~al~~~~-~~l~~l~~~P~r~s~Lt~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~ 201 (275)
|+||++||+||.||+++. +|+ |||+|+||++|+++++ |++.+.++ ++|.+....+. ++.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hv------PyRdSkLT~lL~dsLg--gn~~t~~i---~~isp~~~~~~---------eTl 60 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHV------PYRDSKMTRILQDSLG--GNCRTTIV---ICCSPSVFNEA---------ETK 60 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSC------CGGGSHHHHHTHHHHH--SSSEEEEE---EEECCSGGGHH---------HHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCC------CCcchHHHHHHHHHcC--CCccceee---eeeCCCcccHH---------HHH
Confidence 899999999999999864 465 9999999999999988 88877555 55555444433 566
Q ss_pred EEEEeCCCCceEECCeeec
Q psy7272 202 VTLIPFQEALCYVNGRQIS 220 (275)
Q Consensus 202 vtL~~~s~a~t~VNG~~I~ 220 (275)
.||.++++++.+.|...++
T Consensus 61 ~TL~fa~rak~i~n~~~~n 79 (117)
T 3kin_B 61 STLMFGQRAKTIKNTVSVN 79 (117)
T ss_dssp HHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHhCcccCCceec
Confidence 6788887777777765554
No 60
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=98.82 E-value=5.7e-09 Score=79.09 Aligned_cols=77 Identities=17% Similarity=0.261 Sum_probs=61.3
Q ss_pred EeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEeC-CEEEEEeCCCCc-eEECCeeeccceecCCCCE------
Q psy7272 159 YIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENVE-GVVTLIPFQEAL-CYVNGRQISEPTVLNTGSR------ 230 (275)
Q Consensus 159 ~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e-~~vtL~~~s~a~-t~VNG~~I~~~~~L~~GDr------ 230 (275)
+..+....|||.++ +++.|.++.|++.||.|...+ |.+.+. |.++ +||||+++ .+..|..||.
T Consensus 17 l~~~~~~rIGR~~~------~~l~LddpsVs~~HAti~~~~~G~~~l~--S~nGtVFVNGqrv-~~~~I~~gDtI~g~v~ 87 (102)
T 3uv0_A 17 LKADTIYRIGRQKG------LEISIADESMELAHATACILRRGVVRLA--ALVGKIFVNDQEE-TVVDIGMENAVAGKVK 87 (102)
T ss_dssp CCTTCCEEEESSTT------STEECCCTTSCTTCEEEEEEETTEEEEE--ESSSCEEETTEEE-SEEEECGGGCBTTEEE
T ss_pred eecCcEEEEcCCCC------CcEEECCcccccceEEEEecCCceEEEE--eccCcEEECCEEe-eeEEccCCcccccEEE
Confidence 33345668899977 999999999999999998755 555554 8888 69999999 8999999999
Q ss_pred EEeCCceE-EEEeCC
Q psy7272 231 VILGKNHV-FRFNHP 244 (275)
Q Consensus 231 I~lG~~~~-f~f~~P 244 (275)
++||+-.- ++|.+|
T Consensus 88 lrFGnvea~l~~~~~ 102 (102)
T 3uv0_A 88 LRFGNVEARLEFGED 102 (102)
T ss_dssp EEETTEEEEEEEC--
T ss_pred EEecCEEEEEEecCC
Confidence 99996543 666654
No 61
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=98.79 E-value=9.4e-09 Score=81.16 Aligned_cols=79 Identities=25% Similarity=0.259 Sum_probs=70.0
Q ss_pred EeeccccccCCCC-CCCCCCcceeeecCCcccccceEEEEeCCEEEEEeCCCCceEECCeeeccceecCCCCEEEeCCce
Q psy7272 159 YIKDGRTKVGSAE-SNLPQESQDIQLSGSHIKTEHCTFENVEGVVTLIPFQEALCYVNGRQISEPTVLNTGSRVILGKNH 237 (275)
Q Consensus 159 ~L~~~~t~IGr~~-~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~~vtL~~~s~a~t~VNG~~I~~~~~L~~GDrI~lG~~~ 237 (275)
-|.++..+||+.+ . |||+|.++.|++.||.+...++.+.|. .+.+++|+||+++.+...|..|+.+.+| ..
T Consensus 20 ~L~~~~~~IGs~~~~------~DLvL~D~~Vs~~H~~L~~~~~g~~L~-~s~ngt~vdG~~v~~~~~L~~g~~l~lG-~~ 91 (123)
T 4a0e_A 20 ELPHGRCVFGSDPLQ------SDIVLSDSEIAPVHLVLMVDEEGIRLT-DSAEPLLQEGLPVPLGTLLRAGSCLEVG-FL 91 (123)
T ss_dssp EECSEEEEEESCTTT------CSEECCCTTSCSSCEEEEEETTEEEEE-EESSCCEETTEECCTTCBCCTTSCEEET-TE
T ss_pred EcCCCcEEECCCCCC------CCEEEeCCCccceeEEEEECCCeEEEE-eccCCEEECCEEcccccccCCCCEEEEc-cE
Confidence 4566778899987 6 999999999999999999999999997 7888999999999887799999999999 67
Q ss_pred EEEEeCCc
Q psy7272 238 VFRFNHPD 245 (275)
Q Consensus 238 ~f~f~~P~ 245 (275)
.|.|.+..
T Consensus 92 ~l~~~~~~ 99 (123)
T 4a0e_A 92 LWTFVAVG 99 (123)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 78887553
No 62
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=98.62 E-value=5.5e-08 Score=88.12 Aligned_cols=77 Identities=18% Similarity=0.195 Sum_probs=60.2
Q ss_pred EEeeccccccCCCCCCCCCCcceeeecCCcccccceEEEEe-----------CCEEEEEeC-CCCceEECCeeeccc-ee
Q psy7272 158 YYIKDGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENV-----------EGVVTLIPF-QEALCYVNGRQISEP-TV 224 (275)
Q Consensus 158 ~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~-----------e~~vtL~~~-s~a~t~VNG~~I~~~-~~ 224 (275)
+.|..+...|||...... +.|.+.+++||++||.|+.. ...++|+|+ |+++|||||++|... ..
T Consensus 16 ~~L~pg~YlIGR~~~~~~---~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLgSknGTfVNGerI~~~~~~ 92 (325)
T 3huf_A 16 RILFPGTYIVGRNVSDDS---SHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLDTKFGTKVNEKVVGQNGDS 92 (325)
T ss_dssp EEECSEEEEEESSCCCBT---TEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECSCSSCEEETTEECCTTCEE
T ss_pred EEecCCeEEECCCCCccC---ceeecCCCCccccceEEEEecccccccccCCcceEEEEECCCCCCEEECCEECCCceee
Confidence 344455588999875322 45799999999999999875 237899997 999999999999753 34
Q ss_pred c-CCCCEEEeCCce
Q psy7272 225 L-NTGSRVILGKNH 237 (275)
Q Consensus 225 L-~~GDrI~lG~~~ 237 (275)
| .+||+|.||...
T Consensus 93 L~~dgd~I~fG~~~ 106 (325)
T 3huf_A 93 YKEKDLKIQLGKCP 106 (325)
T ss_dssp ECSSEEEEEETTCS
T ss_pred ecCCCCEEEecCCc
Confidence 5 589999999754
No 63
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=98.29 E-value=2.5e-06 Score=65.26 Aligned_cols=74 Identities=8% Similarity=0.156 Sum_probs=58.2
Q ss_pred eecccc-ccCCCCCCCCCCcceeeecCCcccccceEEEEe--CCEEEEEeCCCCceEECCeeecc--ceecCCCCEEEeC
Q psy7272 160 IKDGRT-KVGSAESNLPQESQDIQLSGSHIKTEHCTFENV--EGVVTLIPFQEALCYVNGRQISE--PTVLNTGSRVILG 234 (275)
Q Consensus 160 L~~~~t-~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~--e~~vtL~~~s~a~t~VNG~~I~~--~~~L~~GDrI~lG 234 (275)
|.++.+ +|||++. . .+.+..+|+.||.+... .+.+++.+...|++++||+++.+ ...|++||+|.|-
T Consensus 19 L~~g~~v~iGR~p~------t--~I~DkrcSR~h~~L~~~~~~g~v~vk~lg~Np~~vng~~l~k~~~~~L~~GD~l~Ll 90 (102)
T 3kt9_A 19 LPHLEAVVIGRGPE------T--KITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMV 90 (102)
T ss_dssp CCBTCEEEECSSTT------T--CCCCTTSCSSCEEEEEETTTTEEEEEECSSSCCEETTEECCBTCEEEECTTCCEEEE
T ss_pred cCCCCcEEeccCCc------c--ccccCcccCcceEEEEecCCCEEEEEECcCCCCeECCEEcCCCCeEEeCCCCEEEEc
Confidence 444444 5799865 3 33688999999999876 56889999999999999999964 5889999999987
Q ss_pred CceE-EEE
Q psy7272 235 KNHV-FRF 241 (275)
Q Consensus 235 ~~~~-f~f 241 (275)
...+ |++
T Consensus 91 ~~~~~~~v 98 (102)
T 3kt9_A 91 NELYPYIV 98 (102)
T ss_dssp TTEEEEEE
T ss_pred cCCceEEE
Confidence 5443 443
No 64
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=98.26 E-value=1.2e-06 Score=67.94 Aligned_cols=73 Identities=11% Similarity=0.143 Sum_probs=59.1
Q ss_pred ccccccCCCCCCCCCCcceeeecCCcccccceEEEE--eCCEEEEEeCCCCceEECCeeec--cceecCCCCEEEe--CC
Q psy7272 162 DGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFEN--VEGVVTLIPFQEALCYVNGRQIS--EPTVLNTGSRVIL--GK 235 (275)
Q Consensus 162 ~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~--~e~~vtL~~~s~a~t~VNG~~I~--~~~~L~~GDrI~l--G~ 235 (275)
.+..+|||.+.. .+.+..+|++||.+.. .++.+++.+...|++++||.++. ....|++||+|.| |
T Consensus 28 ~g~~viGR~p~t--------~I~DkrcSR~hv~L~ad~~~~~v~vk~lG~Np~~vng~~l~k~~~~~L~~GD~leLl~g- 98 (110)
T 2brf_A 28 GQALVLGRGPLT--------QVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGVGDTLYLVNG- 98 (110)
T ss_dssp TCCEEECSBTTT--------TBCCTTSCSSCEEEEEETTTTEEEEEECSSSCCEEC-CBCCTTCEEEEETTCEEEEETT-
T ss_pred CCCEEEcCCCCc--------ccccccceeeeEEEEEecCCCEEEEEEcccCCcEECCEEcCCCCEEEecCCCEEEEccC-
Confidence 477899998642 3577899999999974 46899999999999999999995 4778999999987 5
Q ss_pred ceEEEEeC
Q psy7272 236 NHVFRFNH 243 (275)
Q Consensus 236 ~~~f~f~~ 243 (275)
.|.|++..
T Consensus 99 ~y~~~v~f 106 (110)
T 2brf_A 99 LHPLTLRW 106 (110)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEe
Confidence 67777765
No 65
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.21 E-value=1.4e-06 Score=81.71 Aligned_cols=82 Identities=16% Similarity=0.163 Sum_probs=66.8
Q ss_pred EEEeeccccccCCCCCCCCCCcceeeecCCcc---------cccceEEEEeCC-----EEEEEeCCCCceEECCeeec--
Q psy7272 157 IYYIKDGRTKVGSAESNLPQESQDIQLSGSHI---------KTEHCTFENVEG-----VVTLIPFQEALCYVNGRQIS-- 220 (275)
Q Consensus 157 t~~L~~~~t~IGr~~~~~~~~~~dI~L~~~~I---------s~~Hc~I~~~e~-----~vtL~~~s~a~t~VNG~~I~-- 220 (275)
.+.|..+..+|||... |+|.+.++.+ |+.||.|....+ .++|++.|.++|||||..+.
T Consensus 22 ~~~l~~~~~~iGR~~~------~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D~S~nGt~vn~~~~~~~ 95 (419)
T 3i6u_A 22 NLECVNDNYWFGRDKS------CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKG 95 (419)
T ss_dssp CEEECSSEEEEESSTT------SSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEECCSSCEEETTEECCTT
T ss_pred ceEecCCCEEecCCCc------cCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEECCcCCceECcccccCC
Confidence 4567788889999876 9999999876 999999975422 48899999999999999995
Q ss_pred cceecCCCCEEEeCCce--EEEEeCC
Q psy7272 221 EPTVLNTGSRVILGKNH--VFRFNHP 244 (275)
Q Consensus 221 ~~~~L~~GDrI~lG~~~--~f~f~~P 244 (275)
.+..|.+||.|.+|... +|.|.+.
T Consensus 96 ~~~~l~~~d~i~~~~~~~~~~~~~~~ 121 (419)
T 3i6u_A 96 KRRPLNNNSEIALSLSRNKVFVFFDL 121 (419)
T ss_dssp CEEECCTTEEEEESSTTCEEEEEEES
T ss_pred CcccCCCCCEeeeeccccceEEEecc
Confidence 45679999999999654 4666543
No 66
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.15 E-value=4e-06 Score=67.43 Aligned_cols=73 Identities=10% Similarity=0.065 Sum_probs=59.4
Q ss_pred ccccccCCCCCCCCCCcceeeecCCcccccceEEEE--eCCEEEEEeCCCCceEECCeeec--cceecCCCCEEE--eCC
Q psy7272 162 DGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFEN--VEGVVTLIPFQEALCYVNGRQIS--EPTVLNTGSRVI--LGK 235 (275)
Q Consensus 162 ~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~--~e~~vtL~~~s~a~t~VNG~~I~--~~~~L~~GDrI~--lG~ 235 (275)
.+..+|||.+. ..+.+..+|++||.+.. ..+.+++.+...|.++|||.++. ....|++||+|. .|
T Consensus 28 ~g~vvIGRgPe--------t~ItDkRcSR~qv~L~ad~~~g~V~Vk~lG~NP~~vng~~L~k~~~~~L~~GD~LeLl~g- 98 (143)
T 1yj5_C 28 GQALVLGRGPL--------TQVTDRKCSRNQVELIADPESRTVAVKQLGVNPSTVGVHELKPGLSGSLSLGDVLYLVNG- 98 (143)
T ss_dssp TCEEEECSBTT--------TTBCCSSSCSSCEEEEEETTTTEEEEEECSSSCCEETTEECCTTCEEEECTTCEEESSSS-
T ss_pred CCCEEEcCCCc--------cccccccccceeEEEEEecCCCeEEEEEcccCCcEECCEEecCCCEEEecCCCEEEEecC-
Confidence 46788999854 34678899999999975 45799999999999999999995 467899999998 45
Q ss_pred ceEEEEeC
Q psy7272 236 NHVFRFNH 243 (275)
Q Consensus 236 ~~~f~f~~ 243 (275)
.|.|+|..
T Consensus 99 ~y~f~V~f 106 (143)
T 1yj5_C 99 LYPLTLRW 106 (143)
T ss_dssp CSEEEEEE
T ss_pred CceEEEEe
Confidence 56666655
No 67
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.06 E-value=4.3e-06 Score=73.38 Aligned_cols=70 Identities=9% Similarity=0.110 Sum_probs=56.1
Q ss_pred ccccccCCCCCCCCCCcceeeecCCcccccceEEEEe--C--CEEEEEeC-CCCc-eEECCeeeccceecC-CCCEEEeC
Q psy7272 162 DGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFENV--E--GVVTLIPF-QEAL-CYVNGRQISEPTVLN-TGSRVILG 234 (275)
Q Consensus 162 ~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~--e--~~vtL~~~-s~a~-t~VNG~~I~~~~~L~-~GDrI~lG 234 (275)
+...+||+... +||++.++ . |+.+... + +.++|+++ |+++ +||||++|.++..|+ .||.|.+|
T Consensus 91 ~~~itIG~~~~------~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~~i~~~~~L~~~GD~I~ig 160 (238)
T 1wv3_A 91 QDTMTIGPNAY------DDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQLTNKAYIGDHIYVE 160 (238)
T ss_dssp CSEEEEESSTT------SSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTEECCSSEEEEETTCEEEET
T ss_pred CceEEEeCCCC------CeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCEEeccceeccCCcCEEEEC
Confidence 33778999776 99999888 2 5666655 3 58899998 5676 599999999999999 99999999
Q ss_pred CceEEEEe
Q psy7272 235 KNHVFRFN 242 (275)
Q Consensus 235 ~~~~f~f~ 242 (275)
...|.|.
T Consensus 161 -~~~~~~~ 167 (238)
T 1wv3_A 161 -GIWLEVQ 167 (238)
T ss_dssp -TEEEEEC
T ss_pred -CEEEEEE
Confidence 5666664
No 68
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=97.82 E-value=1.1e-05 Score=63.30 Aligned_cols=71 Identities=10% Similarity=0.073 Sum_probs=56.8
Q ss_pred ccccccCCCCCCCCCCcceeeecCCcccccceEEEE--eCCEEEEEeCCCCceEECCeeec--cceecCCCCEEE--eCC
Q psy7272 162 DGRTKVGSAESNLPQESQDIQLSGSHIKTEHCTFEN--VEGVVTLIPFQEALCYVNGRQIS--EPTVLNTGSRVI--LGK 235 (275)
Q Consensus 162 ~~~t~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~--~e~~vtL~~~s~a~t~VNG~~I~--~~~~L~~GDrI~--lG~ 235 (275)
.+..+|||.+. ..+.+..+|++||.+.. .++.+++.+...|++++||.++. ....|++||+|. .|
T Consensus 35 ~g~~viGRgp~--------t~I~DkrcSR~qv~L~ad~~~~~v~vk~lG~NP~~vng~~l~k~~~~~L~~GD~l~Ll~g- 105 (119)
T 1ujx_A 35 GQALVLGRGPL--------TQVTDRKCSRNQVELIADPESRTVAVKQLGVNPSTVGVQELKPGLSGSLSLGDVLYLVNG- 105 (119)
T ss_dssp SCCEEESBBTT--------TTBCCTTSCTTSEEEEEETTTTEEEEEECSSSCCBSSSSBCCTTCEEEEETTCCCBCBTT-
T ss_pred CCCEEEcCCCC--------cccccccccceeEEEEEecCCCEEEEEEcccCCcEECCEEecCCCEEEecCCCEEEEecC-
Confidence 46788999854 34578899999999975 45799999999999999999995 467899999997 45
Q ss_pred ceEEEE
Q psy7272 236 NHVFRF 241 (275)
Q Consensus 236 ~~~f~f 241 (275)
.|.|+|
T Consensus 106 ~y~~~v 111 (119)
T 1ujx_A 106 LYPLTL 111 (119)
T ss_dssp BSCCEE
T ss_pred CeEEEE
Confidence 444444
No 69
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=89.34 E-value=0.17 Score=37.92 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=24.9
Q ss_pred CCCceEECCeeeccceecCCCCEEEeCCceEEEEeCCchhhh
Q psy7272 208 QEALCYVNGRQISEPTVLNTGSRVILGKNHVFRFNHPDQVRV 249 (275)
Q Consensus 208 s~a~t~VNG~~I~~~~~L~~GDrI~lG~~~~f~f~~P~~a~~ 249 (275)
....+-|||+.+...+.|++||||.|=. +...||.++|.
T Consensus 57 ~~~~V~Vng~~v~~d~~L~dGDRVEIyr---pl~~DPk~~Rr 95 (97)
T 2hj1_A 57 STNKIGIFSRPIKLTDVLKEGDRIEIYR---PLLADPKEIRR 95 (97)
T ss_dssp TTSEEEEEECSCCTTCBCCTTCEEEECC---CCC--------
T ss_pred cccEEEEcCEECCCCccCCCCCEEEEEe---cccCCHHHHhh
Confidence 3567899999999889999999998752 33358988875
No 70
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=79.48 E-value=1.3 Score=30.65 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=20.7
Q ss_pred ceEECCeeeccceecCCCCEEEe
Q psy7272 211 LCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
.+.|||+.+...+.|++||+|.|
T Consensus 48 ~v~vNg~~v~~~~~L~~gD~V~i 70 (77)
T 2q5w_D 48 QVAVNEEFVQKSDFIQPNDTVAL 70 (77)
T ss_dssp EEEETTEEECTTSEECTTCEEEE
T ss_pred EEEECCEECCCCCCcCCCCEEEE
Confidence 58999999988899999999976
No 71
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=75.76 E-value=2 Score=30.68 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=21.2
Q ss_pred CceEECCeeeccceecCCCCEEEe
Q psy7272 210 ALCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 210 a~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
..+.|||+.+...+.|++||.|.|
T Consensus 59 ~~v~VN~~~v~~~~~l~~gDeV~i 82 (89)
T 3po0_A 59 INVLRNGEAAALGEATAAGDELAL 82 (89)
T ss_dssp SEEEETTEECCTTSBCCTTCEEEE
T ss_pred EEEEECCEECCCCcccCCCCEEEE
Confidence 468999999988889999999976
No 72
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=75.53 E-value=2.1 Score=28.85 Aligned_cols=23 Identities=17% Similarity=0.140 Sum_probs=19.6
Q ss_pred ceEECCeeeccc----eecCCCCEEEe
Q psy7272 211 LCYVNGRQISEP----TVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~~~----~~L~~GDrI~l 233 (275)
.+.|||+.+... +.|++||+|.|
T Consensus 31 ~vavN~~~v~~~~~~~~~L~dgD~v~i 57 (64)
T 2cu3_A 31 AVLLNEEAFLGLEVPDRPLRDGDVVEV 57 (64)
T ss_dssp EEEETTEEEEGGGCCCCCCCTTCEEEE
T ss_pred EEEECCEECCccccCCcCCCCCCEEEE
Confidence 488999999754 88999999976
No 73
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=73.27 E-value=2.4 Score=29.55 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=20.4
Q ss_pred ceEECCeeeccceecCCCCEEEe
Q psy7272 211 LCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
.+.|||+.+...+.|++||.|.|
T Consensus 52 ~v~vN~~~v~~~~~l~~gD~V~i 74 (81)
T 1fm0_D 52 LAAVNQTLVSFDHPLTDGDEVAF 74 (81)
T ss_dssp EEEETTEECCTTCBCCTTCEEEE
T ss_pred EEEECCEECCCCCCCCCCCEEEE
Confidence 58899999988889999999876
No 74
>1rws_A Hypothetical protein PF1061; residual dipolar couplings, structural genomics, unknown FUN; NMR {Pyrococcus furiosus} SCOP: d.15.3.2 PDB: 1sf0_A
Probab=72.69 E-value=1.5 Score=30.86 Aligned_cols=26 Identities=27% Similarity=0.405 Sum_probs=22.3
Q ss_pred CCCceEECCeeeccceecCCCCEEEe
Q psy7272 208 QEALCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 208 s~a~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
....+.|||+.+...+.|++||+|.|
T Consensus 45 ~~v~VavNg~~v~~~~~L~dGD~V~i 70 (77)
T 1rws_A 45 ESAIAKVNGKVVLEDDEVKDGDFVEV 70 (77)
T ss_dssp CSSCEEETTEEECSSSCCCSSCCCBC
T ss_pred cCEEEEECCEECCCCCCcCCCCEEEE
Confidence 44568999999988899999999876
No 75
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=70.64 E-value=2.5 Score=30.96 Aligned_cols=23 Identities=35% Similarity=0.283 Sum_probs=20.4
Q ss_pred ceEECCeeeccceecCCCCEEEe
Q psy7272 211 LCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
.+.|||+.+...+.|++||+|.|
T Consensus 69 ~v~VNg~~v~~~~~L~dGDeV~i 91 (98)
T 1vjk_A 69 NIAVNGRYVSWDEELKDGDVVGV 91 (98)
T ss_dssp EEEETTBCCCTTCBCCTTCEEEE
T ss_pred EEEECCEECCCCCCCCCCCEEEE
Confidence 47899999988889999999987
No 76
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=68.29 E-value=3.6 Score=28.19 Aligned_cols=23 Identities=13% Similarity=0.235 Sum_probs=20.3
Q ss_pred ceEECCeeeccceecCCCCEEEe
Q psy7272 211 LCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
.+.+||..+.....|++||+|.|
T Consensus 41 ~vavN~~~v~~~~~L~~gD~V~i 63 (70)
T 1ryj_A 41 VVKKNGQIVIDEEEIFDGDIIEV 63 (70)
T ss_dssp EEEETTEECCTTSBCCTTCEEEE
T ss_pred EEEECCEECCCcccCCCCCEEEE
Confidence 48899999988789999999876
No 77
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=67.96 E-value=2.2 Score=28.92 Aligned_cols=23 Identities=13% Similarity=0.408 Sum_probs=19.7
Q ss_pred ceEECCeeecc----ceecCCCCEEEe
Q psy7272 211 LCYVNGRQISE----PTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~~----~~~L~~GDrI~l 233 (275)
.+.|||.-+.. .+.|++||+|.|
T Consensus 33 ~vavN~~~v~~~~~~~~~L~~gD~v~i 59 (66)
T 1f0z_A 33 ALAINQQIVPREQWAQHIVQDGDQILL 59 (66)
T ss_dssp EEEETTEEECHHHHTTCCCCTTEEECE
T ss_pred EEEECCEECCchhcCCcCCCCCCEEEE
Confidence 58999999975 688999999865
No 78
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=66.59 E-value=4.1 Score=29.31 Aligned_cols=25 Identities=16% Similarity=0.333 Sum_probs=21.1
Q ss_pred CceEECCeeeccceecCCCCEEEeC
Q psy7272 210 ALCYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 210 a~t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
..+.|||+.+.....|+.||.|.+-
T Consensus 26 G~V~VNg~~~~~~~~v~~gd~I~v~ 50 (92)
T 2k6p_A 26 GAVWLNGSCAKASKEVKAGDTISLH 50 (92)
T ss_dssp TCCEETTEECCTTCBCCTTCEEEEC
T ss_pred CcEEECCEEcCCCCCcCCCCEEEEE
Confidence 4689999998667789999999874
No 79
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=64.66 E-value=4.6 Score=29.26 Aligned_cols=25 Identities=12% Similarity=0.040 Sum_probs=20.6
Q ss_pred CCceEECCeeecc----ceecCCCCEEEe
Q psy7272 209 EALCYVNGRQISE----PTVLNTGSRVIL 233 (275)
Q Consensus 209 ~a~t~VNG~~I~~----~~~L~~GDrI~l 233 (275)
...+.|||+-|.. .+.|++||+|.|
T Consensus 52 ~vaVavNg~iV~~~~~~~~~L~dGD~Vei 80 (87)
T 1tyg_B 52 IVIVERNKEIIGKERYHEVELCDRDVIEI 80 (87)
T ss_dssp CCEEEETTEEECGGGTTTSBCCSSSEEEE
T ss_pred CEEEEECCEECChhhcCCcCCCCCCEEEE
Confidence 3458999999975 578999999976
No 80
>3dwg_C 9.5 kDa culture filtrate antigen CFP10A; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3dwm_A
Probab=60.82 E-value=5.8 Score=28.47 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=19.4
Q ss_pred ceEECCeeec----cceecCCCCEEEe
Q psy7272 211 LCYVNGRQIS----EPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~----~~~~L~~GDrI~l 233 (275)
.++|||+.+. ..+.|++||.|.|
T Consensus 60 ~v~VN~~~v~~~~~~~~~L~~gDeV~i 86 (93)
T 3dwg_C 60 NIYVNDEDVRFSGGLATAIADGDSVTI 86 (93)
T ss_dssp EEEETTEEGGGTTGGGCBCCTTCEEEE
T ss_pred EEEECCEEccCcCCCCcCCCCCCEEEE
Confidence 5789999987 3688999999876
No 81
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=59.98 E-value=4.3 Score=29.81 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=20.7
Q ss_pred CCCceEECCeee----ccceecCCCCEEEe
Q psy7272 208 QEALCYVNGRQI----SEPTVLNTGSRVIL 233 (275)
Q Consensus 208 s~a~t~VNG~~I----~~~~~L~~GDrI~l 233 (275)
+...+.|||+.+ ...+.|++||.|.|
T Consensus 63 ~~~~v~VNg~~v~~~~~~~~~L~~gD~V~i 92 (99)
T 2l52_A 63 GSINILINGNNIRHLEGLETLLKDSDEIGI 92 (99)
T ss_dssp SSCEEEETTSCGGGTTSTTSCCCTTEEEEE
T ss_pred cccEEEECCEEccccCCCCCCCCCCCEEEE
Confidence 334689999988 45678999999876
No 82
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=58.72 E-value=6.2 Score=27.44 Aligned_cols=25 Identities=12% Similarity=0.165 Sum_probs=20.5
Q ss_pred CCceEECCeeecc----ceecCCCCEEEe
Q psy7272 209 EALCYVNGRQISE----PTVLNTGSRVIL 233 (275)
Q Consensus 209 ~a~t~VNG~~I~~----~~~L~~GDrI~l 233 (275)
...+.+||.-|.+ .+.|++||+|.+
T Consensus 30 ~vAV~vNg~iVpr~~~~~~~L~dGD~veI 58 (73)
T 2kl0_A 30 HFAVALNYDVVPRGKWDETPVTAGDEIEI 58 (73)
T ss_dssp SCEEEESSSEECHHHHTTCBCCTTCEEEE
T ss_pred cEEEEECCEECChHHcCcccCCCCCEEEE
Confidence 3458999999975 478999999976
No 83
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=58.66 E-value=5.1 Score=28.30 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=21.2
Q ss_pred CCceEECCeeeccc----eecCCCCEEEeC
Q psy7272 209 EALCYVNGRQISEP----TVLNTGSRVILG 234 (275)
Q Consensus 209 ~a~t~VNG~~I~~~----~~L~~GDrI~lG 234 (275)
...+.+||.-|.+. +.|++||+|.|=
T Consensus 34 ~vAVavNg~iVpr~~~~~~~L~dGD~IEIv 63 (78)
T 2k5p_A 34 YVTVELNGEVLEREAFDATTVKDGDAVEFL 63 (78)
T ss_dssp TCCEEETTEECCTTHHHHCEECSSBCEEEC
T ss_pred cEEEEECCEECChHHcCcccCCCCCEEEEE
Confidence 34589999999764 789999999873
No 84
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=57.57 E-value=7.7 Score=30.18 Aligned_cols=26 Identities=12% Similarity=0.207 Sum_probs=21.5
Q ss_pred CCceEECCeeeccceecCCCCEEEeC
Q psy7272 209 EALCYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 209 ~a~t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
...+.|||..+.....|+.||.|.|-
T Consensus 33 ~G~V~VNG~~vk~s~~V~~GD~I~I~ 58 (133)
T 1dm9_A 33 GGKVHYNGQRSKPSKIVELNATLTLR 58 (133)
T ss_dssp TTCEEETTEECCTTCBCCTTCEEEEE
T ss_pred CCcEEECCEEcCCCCEeCCCCEEEEE
Confidence 45799999998667789999998773
No 85
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=57.53 E-value=6.4 Score=27.82 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=19.3
Q ss_pred ceEECCeeec----cceecCCCCEEEe
Q psy7272 211 LCYVNGRQIS----EPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~----~~~~L~~GDrI~l 233 (275)
.+.|||+.+. ..+.|++||.|.|
T Consensus 57 ~v~vN~~~v~~~~~~~~~l~~gD~V~i 83 (90)
T 2g1e_A 57 IILVNGNNITSMKGLDTEIKDDDKIDL 83 (90)
T ss_dssp EEEESSSBGGGTCSSSCBCCTTCEEEE
T ss_pred EEEECCEEccccCCCCcCCCCCCEEEE
Confidence 5789999886 4678999999877
No 86
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=57.15 E-value=7 Score=27.65 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=19.6
Q ss_pred eEECCeeeccceecCCCCEEEe
Q psy7272 212 CYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 212 t~VNG~~I~~~~~L~~GDrI~l 233 (275)
..|||+.+.-.++|++||.|.|
T Consensus 44 AkVNG~~v~L~~~L~~gd~VeI 65 (78)
T 3hvz_A 44 AKVDGRIVPIDYKVKTGEIIDV 65 (78)
T ss_dssp EEETTEEECTTCBCCTTCBEEE
T ss_pred EEECCEEcCCCcccCCCCEEEE
Confidence 5789999988899999999876
No 87
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=56.74 E-value=8.1 Score=26.54 Aligned_cols=25 Identities=24% Similarity=0.214 Sum_probs=19.5
Q ss_pred CCceEECCeee-ccceecCCCCEEEe
Q psy7272 209 EALCYVNGRQI-SEPTVLNTGSRVIL 233 (275)
Q Consensus 209 ~a~t~VNG~~I-~~~~~L~~GDrI~l 233 (275)
...+.|||+.| ...+.|++||.|.|
T Consensus 42 ~~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 42 VCAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp TCEEEESSSEECCTTCCCCTTCEEEE
T ss_pred ccEEEECCEEcCCCCcCCCCCCEEEE
Confidence 34678999885 45678999999876
No 88
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=55.90 E-value=5.1 Score=28.01 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=22.3
Q ss_pred CceEECCeeecc-ceecCCCCEEEeCCce
Q psy7272 210 ALCYVNGRQISE-PTVLNTGSRVILGKNH 237 (275)
Q Consensus 210 a~t~VNG~~I~~-~~~L~~GDrI~lG~~~ 237 (275)
..++|||+.+.. ...+..||.|.++...
T Consensus 46 G~V~VNG~~v~~~~~~v~~gd~I~v~~~~ 74 (79)
T 1p9k_A 46 GQVKVDGAVETRKRCKIVAGQTVSFAGHS 74 (79)
T ss_dssp HHHEETTBCCCCSSCCCCSSEEEEETTEE
T ss_pred CEEEECCEEecCCCCCCCCCCEEEECCEE
Confidence 468999999854 4579999999998544
No 89
>1ksk_A Ribosomal small subunit pseudouridine synthase A; RSUA, lyase; 2.00A {Escherichia coli} SCOP: d.265.1.3 d.66.1.5 PDB: 1ksl_A 1ksv_A*
Probab=50.23 E-value=15 Score=31.03 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=29.2
Q ss_pred CCceEECCeeec-cceecCCCCEEEeC--------CceEEEEeCCch
Q psy7272 209 EALCYVNGRQIS-EPTVLNTGSRVILG--------KNHVFRFNHPDQ 246 (275)
Q Consensus 209 ~a~t~VNG~~I~-~~~~L~~GDrI~lG--------~~~~f~f~~P~~ 246 (275)
...+.|||+.+. ....++.||.|.+- ..+++.++.|.-
T Consensus 27 ~G~V~VNG~~v~~~~~~v~~gD~I~v~~~~i~~e~d~~~lvvnKP~G 73 (234)
T 1ksk_A 27 GNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQG 73 (234)
T ss_dssp TTCEEETTEECCCTTCEECTTCCEEETTEEECCCCCCCEEEEEECTT
T ss_pred cCeEEECCEEeCCCCCCCCCCCEEEEeCeEeecCCCCEEEEEECCCC
Confidence 346899999997 56789999998873 456777888754
No 90
>2qjl_A URM1, ubiquitin-related modifier 1; ubiquitin-like protein, signaling protein; 1.44A {Saccharomyces cerevisiae} PDB: 2pko_A 2ax5_A
Probab=46.93 E-value=13 Score=27.02 Aligned_cols=23 Identities=13% Similarity=0.335 Sum_probs=18.8
Q ss_pred ceEECCeeec----cceecCCCCEEEe
Q psy7272 211 LCYVNGRQIS----EPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~----~~~~L~~GDrI~l 233 (275)
.++|||+.+. ..+.|++||.|.|
T Consensus 66 ~v~VN~~~~~~~~~~d~~L~dgDeVa~ 92 (99)
T 2qjl_A 66 ITLINDTDWELEGEKDYILEDGDIISF 92 (99)
T ss_dssp EEEETTEEGGGGTGGGCBCCTTCEEEE
T ss_pred EEEECCEEccccCCCCcCcCCCCEEEE
Confidence 4789999764 4678999999887
No 91
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=46.14 E-value=13 Score=30.21 Aligned_cols=24 Identities=25% Similarity=0.470 Sum_probs=20.9
Q ss_pred CceEECCeeecc----ceecCCCCEEEe
Q psy7272 210 ALCYVNGRQISE----PTVLNTGSRVIL 233 (275)
Q Consensus 210 a~t~VNG~~I~~----~~~L~~GDrI~l 233 (275)
..+.|||+.+.. .+.|++||.|.|
T Consensus 53 v~VaVNg~~v~~~~~~dt~L~dGDeVai 80 (168)
T 1v8c_A 53 VSVFLEGRDVRYLQGLSTPLSPGATLDL 80 (168)
T ss_dssp CEEEETTEEGGGTTGGGCBCCTTCEEEE
T ss_pred EEEEECCEECCCcCCCccCCCCCCEEEE
Confidence 358999999976 789999999987
No 92
>3bbn_D Ribosomal protein S4; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=45.98 E-value=21 Score=29.84 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=20.9
Q ss_pred CCceEECCeeecc-ceecCCCCEEEeC
Q psy7272 209 EALCYVNGRQISE-PTVLNTGSRVILG 234 (275)
Q Consensus 209 ~a~t~VNG~~I~~-~~~L~~GDrI~lG 234 (275)
...+.|||+.++. ...++.||.|.+-
T Consensus 113 ~G~V~VNG~~V~~pS~~V~~gD~I~V~ 139 (201)
T 3bbn_D 113 HRHILVNGRIVDIPSYRCKPQDTIMAR 139 (201)
T ss_dssp TTCEEETTEECCCTTCBCCTTEEEEEC
T ss_pred CCcEEeCCEEEeecceecCCCCEEEEc
Confidence 4578999999975 4578999998875
No 93
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=43.37 E-value=12 Score=26.08 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=18.9
Q ss_pred CCceEECCeeeccceecCCCCEEEe
Q psy7272 209 EALCYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 209 ~a~t~VNG~~I~~~~~L~~GDrI~l 233 (275)
..-+.+||+.+.....+. ||+|.+
T Consensus 36 ~VvV~vNG~~v~~d~~l~-GD~VeI 59 (74)
T 2l32_A 36 EVTVLVDGRPVPEDQSVE-VDRVKV 59 (74)
T ss_dssp CCCEECCCCCCCTTSSSC-CCCEEE
T ss_pred eEEEEECCEECCHHHCCC-CCEEEE
Confidence 346899999997766665 999976
No 94
>3mml_A Allophanate hydrolase subunit 2; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=43.16 E-value=60 Score=29.07 Aligned_cols=60 Identities=15% Similarity=0.230 Sum_probs=37.2
Q ss_pred ccCCCCCCCCCCcceeeecCCcccccceEEEEeCC--EEEEEeCCCCceEECCeeec--cceecCCCCEEEeCCc
Q psy7272 166 KVGSAESNLPQESQDIQLSGSHIKTEHCTFENVEG--VVTLIPFQEALCYVNGRQIS--EPTVLNTGSRVILGKN 236 (275)
Q Consensus 166 ~IGr~~~~~~~~~~dI~L~~~~Is~~Hc~I~~~e~--~vtL~~~s~a~t~VNG~~I~--~~~~L~~GDrI~lG~~ 236 (275)
.+||...... -.|.+.++.+. +..+ .+-|.= ......+||++|. .+..++.||++.||..
T Consensus 46 LvGN~~~aa~---LEitl~G~~l~-------f~~~~~~iAvtG-A~~~~~ldg~~v~~~~~~~v~~G~~L~~g~~ 109 (318)
T 3mml_A 46 LVANPGESAT---IEVTFGGFSAR-------VCGGDVAIAVTG-ADTDPAVNGIPFGTNSIHHVHDGQVISLGAP 109 (318)
T ss_dssp HTTCCTTCCE---EEEESSCCEEE-------EESSCEEEEEEE-SCCCCEETTEECCTTSCEEECTTCEEECCCC
T ss_pred HhCCCCCCcE---EEEecCceEEE-------ECcCCEEEEEEC-CCCcceECCEEcCCCeEEEECCCCEEEeCCC
Confidence 4577554322 35566665433 3333 222222 3457789999995 5788999999999953
No 95
>3dh3_A Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli}
Probab=42.92 E-value=19 Score=31.75 Aligned_cols=38 Identities=16% Similarity=0.292 Sum_probs=28.4
Q ss_pred CCceEECCeeeccceecCCCCEEEeCC----------ceEEEEeCCch
Q psy7272 209 EALCYVNGRQISEPTVLNTGSRVILGK----------NHVFRFNHPDQ 246 (275)
Q Consensus 209 ~a~t~VNG~~I~~~~~L~~GDrI~lG~----------~~~f~f~~P~~ 246 (275)
...+.|||+.+.....+..||.|.+-. .+++.++.|.-
T Consensus 30 ~G~V~VNG~~v~~~~~V~~gD~I~v~~~~i~~~~~ed~~~lvvnKP~G 77 (290)
T 3dh3_A 30 QGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDLVLIALNKPVG 77 (290)
T ss_dssp TTCEEETTEECCTTCEECTTCCEEETTEEECCCCGGGCCEEEEEECTT
T ss_pred CCCEEECCEEccCCcCcCCCCEEEeccccccccccccceEEEEECCCc
Confidence 457899999997677899999998852 24566777743
No 96
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=42.66 E-value=12 Score=28.10 Aligned_cols=23 Identities=35% Similarity=0.377 Sum_probs=19.3
Q ss_pred ceEECCeeec----cceecCCCCEEEe
Q psy7272 211 LCYVNGRQIS----EPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~----~~~~L~~GDrI~l 233 (275)
-+.|||+.+. ..++|++||.|.|
T Consensus 69 lVLVNg~d~e~l~gldt~L~dgD~V~f 95 (110)
T 2k9x_A 69 LVLVNSCDAEVVGGMDYVLNDGDTVEF 95 (110)
T ss_dssp EEEESSSBHHHHTSSCCCCCSSCEEEE
T ss_pred EEEECCeeeeccCCcccCCCCcCEEEE
Confidence 4789998884 4688999999987
No 97
>1vio_A Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae} SCOP: d.265.1.3 d.66.1.5
Probab=42.12 E-value=23 Score=30.03 Aligned_cols=38 Identities=13% Similarity=0.343 Sum_probs=29.2
Q ss_pred CCceEECCeeec-cceecCCCCEEEeC-------Cce-EEEEeCCch
Q psy7272 209 EALCYVNGRQIS-EPTVLNTGSRVILG-------KNH-VFRFNHPDQ 246 (275)
Q Consensus 209 ~a~t~VNG~~I~-~~~~L~~GDrI~lG-------~~~-~f~f~~P~~ 246 (275)
...+.|||+++. ....+..||.|.+- ..+ ++.++.|.-
T Consensus 26 ~G~V~VNG~~v~~~~~~v~~gD~I~v~~~~i~~ed~~~~lvvnKP~G 72 (243)
T 1vio_A 26 QSAVKINGEIVKSGSVQISQEDEIYFEDELLTWIEEGQYFMLNKPQG 72 (243)
T ss_dssp TTCEEETTEECCCTTCEECTTSCEEETTEECCSSCCCCEEEEEECTT
T ss_pred cCcEEECCEEeCCCCCCcCCCCEEEEeccccccCCCCEEEEEECCCC
Confidence 346899999995 56789999999884 356 778888854
No 98
>2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis}
Probab=37.14 E-value=21 Score=23.90 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=18.6
Q ss_pred eEECCeeeccceecCCCCEEEe
Q psy7272 212 CYVNGRQISEPTVLNTGSRVIL 233 (275)
Q Consensus 212 t~VNG~~I~~~~~L~~GDrI~l 233 (275)
..|||+.+.-.+.|..||.|.|
T Consensus 39 a~vNg~lvdl~~~L~~~~~Vei 60 (73)
T 2kmm_A 39 AKVNHKLVPLSYVLNSGDQVEV 60 (73)
T ss_dssp EEETTEECCTTCBCCSSSBEEE
T ss_pred EEECCEEeCCCcCcCCCCEEEE
Confidence 4789999988899999998765
No 99
>1c05_A Ribosomal protein S4 delta 41; two subdomains, unique topology, possible helix-turn-helix motif, ribosome; NMR {Geobacillus stearothermophilus} SCOP: d.66.1.2 PDB: 1c06_A 1eg0_A 1qd7_C
Probab=36.24 E-value=25 Score=28.08 Aligned_cols=26 Identities=12% Similarity=0.307 Sum_probs=20.9
Q ss_pred CCceEECCeeec-cceecCCCCEEEeC
Q psy7272 209 EALCYVNGRQIS-EPTVLNTGSRVILG 234 (275)
Q Consensus 209 ~a~t~VNG~~I~-~~~~L~~GDrI~lG 234 (275)
...+.|||+.+. ....+..||.|.+-
T Consensus 75 ~G~V~VNG~~v~~ps~~V~~gD~I~V~ 101 (159)
T 1c05_A 75 HGHILVDGSRVNIPSYRVKPGQTIAVR 101 (159)
T ss_dssp TTCEEETTEECCCSSCBCCTTCEEEEC
T ss_pred CCCEEECCEEeCcCCcEeCCCCEEEEe
Confidence 346899999996 45679999999885
No 100
>3r8n_D 30S ribosomal protein S4; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 1p6g_D 1p87_D 2aw7_D 2avy_D 2i2u_D 2i2p_D* 2qan_D* 2qb9_D* 2qbb_D* 2qbd_D 2qbf_D 2qbh_D* 2qbj_D* 2qou_D* 2qow_D* 2qoy_D* 2qp0_D* 2vho_D 2vhp_D 2wwl_D* ...
Probab=35.23 E-value=6.3 Score=33.25 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=21.2
Q ss_pred CCceEECCeeecc-ceecCCCCEEEeC
Q psy7272 209 EALCYVNGRQISE-PTVLNTGSRVILG 234 (275)
Q Consensus 209 ~a~t~VNG~~I~~-~~~L~~GDrI~lG 234 (275)
...+.|||+.+.. ...++.||.|.+-
T Consensus 119 ~G~V~VNG~~V~~ps~~Vk~GD~I~V~ 145 (205)
T 3r8n_D 119 HKAIMVNGRVVNIASYQVSPNDVVSIR 145 (205)
T ss_dssp TTCCBSSSSBCCCTTCBCCTTBCCBCC
T ss_pred CCCEEECCEEEccCCcCcCCCCEEEec
Confidence 4578999999964 5679999998875
No 101
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=34.95 E-value=16 Score=27.68 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=19.0
Q ss_pred ceEECCeeec----cceecCCCCEEEe
Q psy7272 211 LCYVNGRQIS----EPTVLNTGSRVIL 233 (275)
Q Consensus 211 ~t~VNG~~I~----~~~~L~~GDrI~l 233 (275)
-++|||+.+. ..+.|++||.|.|
T Consensus 75 ~VlVN~~di~~l~gldt~L~dGDeV~i 101 (114)
T 1wgk_A 75 LVLINDADWELLGELDYQLQDQDSILF 101 (114)
T ss_dssp EEEESSSBHHHHCTTTCBCCSSEEEEE
T ss_pred EEEECCeeeeccCCcCcCCCCCCEEEE
Confidence 4899998773 4688999999887
No 102
>1nh2_B Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 PDB: 1ytf_B*
Probab=34.71 E-value=22 Score=23.23 Aligned_cols=20 Identities=30% Similarity=0.680 Sum_probs=14.6
Q ss_pred HHHHHHHHHhHHHHHHHHHH
Q psy7272 30 EKLIAELNETWEEKLKRTEE 49 (275)
Q Consensus 30 E~L~~el~~t~EE~L~~~e~ 49 (275)
|..++||.+.|+.||..+..
T Consensus 31 e~vL~eLk~~We~KL~~s~v 50 (53)
T 1nh2_B 31 EQTLQDLKNIWQKKLTETKV 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 56689999999999986544
No 103
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=31.66 E-value=1.1e+02 Score=22.68 Aligned_cols=35 Identities=29% Similarity=0.261 Sum_probs=30.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy7272 18 IAEEAVDQLQASEKLIAELNETWEEKLKRTEEIRI 52 (275)
Q Consensus 18 ~~~~~~~~L~e~E~L~~el~~t~EE~L~~~e~~~~ 52 (275)
.-+-+.|.|.|.|..+.++...++|+.+..+..+.
T Consensus 31 qVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr 65 (103)
T 4h22_A 31 QVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKH 65 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678899999999999999999999998777655
No 104
>2vqe_D 30S ribosomal protein S4; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.66.1.2 PDB: 1hnw_D* 1hnx_D* 1hnz_D* 1ibk_D* 1fka_D* 1ibm_D 1xmo_D* 1ibl_D* 1xnq_D* 1xnr_D* 1yl4_G 2b64_D* 2b9m_D* 2b9o_D* 2hgi_G 2hgp_G 2hgr_G 2hhh_D* 1xmq_D* 2j02_D* ...
Probab=30.53 E-value=33 Score=28.68 Aligned_cols=26 Identities=19% Similarity=0.385 Sum_probs=21.3
Q ss_pred CCceEECCeeec-cceecCCCCEEEeC
Q psy7272 209 EALCYVNGRQIS-EPTVLNTGSRVILG 234 (275)
Q Consensus 209 ~a~t~VNG~~I~-~~~~L~~GDrI~lG 234 (275)
...+.|||+.+. ....+..||.|.+-
T Consensus 123 ~G~V~VNG~~v~~ps~~V~~gD~I~V~ 149 (209)
T 2vqe_D 123 HGHITVNGRRVDLPSYRVRPGDEIAVA 149 (209)
T ss_dssp TTCEEETTEECCCTTCBCCTTCEEEEC
T ss_pred CCCEEECCEEeCcCCcCcCCCCEEEEc
Confidence 346899999996 55679999999885
No 105
>2eki_A DRG 1, developmentally-regulated GTP-binding protein 1; protein NEDD3, neural precursor cell expressed developmentally DOWN-regulated protein 3; NMR {Homo sapiens}
Probab=30.10 E-value=17 Score=26.73 Aligned_cols=23 Identities=9% Similarity=0.120 Sum_probs=19.5
Q ss_pred eEECCeeeccceecCCCCEEEeC
Q psy7272 212 CYVNGRQISEPTVLNTGSRVILG 234 (275)
Q Consensus 212 t~VNG~~I~~~~~L~~GDrI~lG 234 (275)
+.+||++|....+|.+||.|.|=
T Consensus 63 aK~~~qrVgldh~L~d~DVV~Iv 85 (93)
T 2eki_A 63 VKHNPQKVGKDHTLEDEDVIQIV 85 (93)
T ss_dssp SSSSSEEECSSCCCCSSEEECEE
T ss_pred ccCCCEECCCCcEecCCCEEEEE
Confidence 44699999999999999988763
No 106
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=28.68 E-value=59 Score=25.05 Aligned_cols=24 Identities=33% Similarity=0.632 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHH
Q psy7272 23 VDQLQASEKLIAELNETWEEKLKR 46 (275)
Q Consensus 23 ~~~L~e~E~L~~el~~t~EE~L~~ 46 (275)
.+.|.|..+++.++..+|+|....
T Consensus 100 ~~~l~ev~~ll~~lreaW~~i~~~ 123 (130)
T 1orj_A 100 KEELQKILEILKDLREAWEEVKKK 123 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999998663
No 107
>1nvp_B Transcription initiation factor IIA alpha chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1
Probab=27.97 E-value=30 Score=22.91 Aligned_cols=20 Identities=35% Similarity=0.732 Sum_probs=14.0
Q ss_pred HHHHHHHHHhHHHHHHHHHH
Q psy7272 30 EKLIAELNETWEEKLKRTEE 49 (275)
Q Consensus 30 E~L~~el~~t~EE~L~~~e~ 49 (275)
|..++||.+-|+.||..+..
T Consensus 35 e~vL~eLk~~We~KL~~s~a 54 (57)
T 1nvp_B 35 EQVLMELKTLWENKLMQSRA 54 (57)
T ss_dssp HHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 56789999999999976543
No 108
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=24.95 E-value=48 Score=26.07 Aligned_cols=26 Identities=12% Similarity=0.482 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy7272 23 VDQLQASEKLIAELNETWEEKLKRTE 48 (275)
Q Consensus 23 ~~~L~e~E~L~~el~~t~EE~L~~~e 48 (275)
.+.|.|..+++.++..+|+|......
T Consensus 100 ~~~ldev~~ll~~LreaW~~i~~~~~ 125 (145)
T 1vh6_A 100 TGMLAEVEGYVTDFRDAWKQAIQSER 125 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 47899999999999999999876543
No 109
>3oep_A Putative uncharacterized protein TTHA0988; KIPI, KIPA, cyclophilin, allophanate hydrolase, structural G unknown function, NPPSFA; 1.75A {Thermus thermophilus} PDB: 3opf_A 3ore_A
Probab=24.41 E-value=1.1e+02 Score=29.03 Aligned_cols=27 Identities=11% Similarity=0.263 Sum_probs=22.4
Q ss_pred CCceEECCeeec--cceecCCCCEEEeCC
Q psy7272 209 EALCYVNGRQIS--EPTVLNTGSRVILGK 235 (275)
Q Consensus 209 ~a~t~VNG~~I~--~~~~L~~GDrI~lG~ 235 (275)
.....+||+++. .+..++.||++.||.
T Consensus 297 ~~~~~ldg~~v~~~~~~~v~~G~~L~~g~ 325 (494)
T 3oep_A 297 GFVALLEGEEIPPGQSFLWPRGKTLRFRP 325 (494)
T ss_dssp SEEEEETTEEECSSEEEEECTTCEEEEEE
T ss_pred CCcceECCEEccCCeEEEECCCCEEEeCC
Confidence 446789999995 577899999999995
No 110
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=20.48 E-value=65 Score=23.81 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=16.9
Q ss_pred EECCeeecc---ceecCCCCEEEe
Q psy7272 213 YVNGRQISE---PTVLNTGSRVIL 233 (275)
Q Consensus 213 ~VNG~~I~~---~~~L~~GDrI~l 233 (275)
.+||.+.+. ...|++||.|.|
T Consensus 72 ~vng~~~~~Ga~~~~v~dGD~i~~ 95 (101)
T 3u7z_A 72 TKGGEQVNTSADQTPVSDGDAFEL 95 (101)
T ss_dssp EETTEECCSCGGGCBCCTTCEEEE
T ss_pred EECCEEhhhchhheEecCCCEEEE
Confidence 578888864 678999999876
Done!