Query psy7273
Match_columns 413
No_of_seqs 166 out of 214
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 22:29:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7273.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7273hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yrb_A Protein fantom; beta sa 93.3 0.26 8.9E-06 44.1 8.0 78 154-238 10-94 (156)
2 1rlw_A Phospholipase A2, CALB 88.1 6.9 0.00024 31.5 11.5 65 164-238 4-75 (126)
3 1ugk_A Synaptotagmin IV, KIAA1 77.7 11 0.00038 31.0 8.7 53 164-219 23-80 (138)
4 3f04_A Synaptotagmin-1; C2A, c 74.9 10 0.00036 31.3 7.8 55 163-220 34-92 (143)
5 1rsy_A Synaptotagmin I; calciu 73.3 10 0.00035 31.9 7.4 54 164-220 43-100 (152)
6 3pyc_A E3 ubiquitin-protein li 71.3 22 0.00074 28.9 8.8 56 161-220 3-62 (132)
7 3rdl_A Protein kinase C alpha 67.3 18 0.00061 29.3 7.5 54 164-220 17-76 (137)
8 2d8k_A Synaptotagmin VII; exoc 66.5 19 0.00064 29.7 7.5 55 162-219 25-83 (141)
9 1tjx_A Similar to synaptotagmi 66.2 21 0.00073 30.0 8.0 54 164-220 26-85 (159)
10 2b3r_A Phosphatidylinositol-4- 65.8 29 0.00098 28.5 8.6 53 164-219 21-78 (134)
11 3fdw_A Synaptotagmin-like prot 65.1 29 0.00098 28.8 8.5 54 164-220 24-84 (148)
12 3m7f_B E3 ubiquitin-protein li 63.1 19 0.00065 31.0 7.2 57 161-220 6-69 (176)
13 2r83_A Synaptotagmin-1; C2A-C2 61.9 22 0.00074 32.8 7.8 68 163-238 19-90 (284)
14 3kwu_A MUNC13-1; calcium bindi 61.1 30 0.001 28.6 7.8 52 163-220 17-72 (148)
15 2cm5_A Rabphilin-3A; protein t 59.2 40 0.0014 28.5 8.5 54 164-220 38-97 (166)
16 2dmh_A Myoferlin; beta-sandwic 58.8 31 0.0011 28.1 7.5 53 162-220 6-61 (140)
17 1dqv_A Synaptotagmin III; beta 58.7 34 0.0012 32.0 8.6 68 163-238 20-91 (296)
18 2dmg_A KIAA1228 protein; beta- 57.4 26 0.00088 28.8 6.8 54 164-220 25-83 (142)
19 2enp_A B/K protein; C2 type 1, 56.4 10 0.00035 31.5 4.1 56 164-224 27-93 (147)
20 2ep6_A MCTP2 protein; beta san 55.5 28 0.00095 28.3 6.6 54 161-220 11-68 (133)
21 1w15_A Synaptotagmin IV; metal 55.2 28 0.00094 29.0 6.6 54 164-220 31-90 (153)
22 3n5a_A Synaptotagmin-7; calciu 54.9 30 0.001 28.0 6.6 54 164-220 17-76 (138)
23 3b7y_A E3 ubiquitin-protein li 54.9 21 0.00073 29.7 5.9 57 161-220 18-81 (153)
24 1a25_A CALB, protein kinase C 54.4 40 0.0014 28.0 7.5 54 164-220 32-91 (149)
25 2chd_A Rabphilin-3A, exophilin 54.0 46 0.0016 27.2 7.7 54 163-219 29-88 (142)
26 2bwq_A Regulating synaptic mem 51.5 45 0.0015 26.6 7.2 53 164-219 19-77 (129)
27 1rh8_A Piccolo protein; beta-s 48.4 24 0.00081 28.9 5.0 53 164-219 19-86 (142)
28 1wfj_A Putative elicitor-respo 48.4 92 0.0031 25.0 8.7 56 160-220 7-66 (136)
29 3fbk_A RGS3, RGP3, regulator o 44.4 69 0.0024 26.7 7.5 55 163-220 27-86 (153)
30 1gmi_A Protein kinase C, epsil 44.4 59 0.002 26.5 6.9 52 164-220 7-73 (136)
31 2nq3_A Itchy homolog E3 ubiqui 39.3 79 0.0027 27.4 7.2 54 161-220 34-91 (173)
32 2q3x_A Regulating synaptic mem 35.9 68 0.0023 27.4 6.2 54 164-220 31-91 (171)
33 2z0u_A WW domain-containing pr 35.8 48 0.0016 28.3 5.1 67 164-238 44-117 (155)
34 1v27_A Regulating synaptic mem 35.3 46 0.0016 27.0 4.7 53 164-219 22-80 (141)
35 2r83_A Synaptotagmin-1; C2A-C2 33.3 1.1E+02 0.0037 27.9 7.5 54 164-220 151-210 (284)
36 3jzy_A Intersectin 2; C2 domai 32.9 1E+02 0.0034 30.8 7.8 53 162-220 386-442 (510)
37 2fk9_A Protein kinase C, ETA t 31.9 1.4E+02 0.0046 25.8 7.5 55 161-220 27-95 (157)
38 2eqr_A N-COR1, N-COR, nuclear 28.1 27 0.00094 25.6 1.9 27 22-49 12-38 (61)
39 1cjy_A CPLA2, protein (cytosol 27.3 1.4E+02 0.0049 32.5 8.2 57 161-220 16-79 (749)
40 1x41_A Transcriptional adaptor 25.5 47 0.0016 24.1 2.8 20 22-41 8-27 (60)
41 2elk_A SPCC24B10.08C protein; 24.5 51 0.0017 23.8 2.8 28 22-49 9-36 (58)
42 2yus_A SWI/SNF-related matrix- 24.0 48 0.0017 25.8 2.8 20 22-41 18-37 (79)
43 2yqk_A Arginine-glutamic acid 23.3 51 0.0017 24.4 2.6 27 22-49 9-35 (63)
44 2yum_A ZZZ3 protein, zinc fing 21.8 47 0.0016 25.0 2.2 20 22-41 8-27 (75)
45 2cqq_A RSGI RUH-037, DNAJ homo 20.7 1.1E+02 0.0038 23.3 4.2 49 22-73 8-59 (72)
No 1
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=93.26 E-value=0.26 Score=44.11 Aligned_cols=78 Identities=24% Similarity=0.462 Sum_probs=56.6
Q ss_pred CCCCCCCCeEEEEEEEEeecCCC-------CCCCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhH
Q psy7273 154 PPHLSPGTELQFRITVLQAVGIS-------TEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSF 226 (413)
Q Consensus 154 p~~l~~g~~ltf~V~I~~a~Glp-------~~~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~f 226 (413)
-.+|.+|..+ |.|-|.++.==| .....+||=|.|++ .| +-+| |+- .+....|+.+..+.|.+..-|
T Consensus 10 ~~~l~~gEnl-fEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~d-fE-tq~T-pv~---~G~~p~y~fts~Y~V~~d~~f 82 (156)
T 2yrb_A 10 TIHLERGENL-FEIHINKVTFSSEVLQASGDKEPVTFCTYAFYD-FE-LQTT-PVV---RGLHPEYNFTSQYLVHVNDLF 82 (156)
T ss_dssp CSSCCSSCEE-EEEEEEEECCCHHHHHHHCSSCCEEEEEECSTT-CC-CEEC-CCE---ESSSCCCCEEEEEEECCSHHH
T ss_pred hhhccCCCcE-EEEEEeEEEEcHHHHhhccccCCcEEEEEEEec-eE-eeec-ccc---cCCCCCcceEEEEEEEeCHHH
Confidence 3466676665 788888876222 22345999999994 33 4445 433 135778888999999999999
Q ss_pred HHHhhcCCEEEe
Q psy7273 227 IEYLKTQPLVFE 238 (413)
Q Consensus 227 i~~l~~~~l~iE 238 (413)
+.||..+.+.+|
T Consensus 83 l~yL~~~~l~lE 94 (156)
T 2yrb_A 83 LQYIQKNTITLE 94 (156)
T ss_dssp HHHHHHCCEEEE
T ss_pred HHHHhcCCEEEE
Confidence 999999999887
No 2
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=88.15 E-value=6.9 Score=31.49 Aligned_cols=65 Identities=14% Similarity=0.192 Sum_probs=46.9
Q ss_pred EEEEEEEeecCCCC-------CCCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEE
Q psy7273 164 QFRITVLQAVGIST-------EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLV 236 (413)
Q Consensus 164 tf~V~I~~a~Glp~-------~~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~ 236 (413)
.++|+|.+|.+||. ..+|-||.+.+.+.....+.|..++++ ....|+.+..|.+... ....|.
T Consensus 4 ~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v~~~-------~~~~l~ 73 (126)
T 1rlw_A 4 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND---INPVWNETFEFILDPN-------QENVLE 73 (126)
T ss_dssp EEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC---SSCEEEEEEEEEECTT-------SCCEEE
T ss_pred EEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCC---CCCcccceEEEEecCC-------CCCEEE
Confidence 57899999999996 457899999998655566777665533 4778887777776322 245677
Q ss_pred Ee
Q psy7273 237 FE 238 (413)
Q Consensus 237 iE 238 (413)
|+
T Consensus 74 i~ 75 (126)
T 1rlw_A 74 IT 75 (126)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 3
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=77.68 E-value=11 Score=30.96 Aligned_cols=53 Identities=17% Similarity=0.285 Sum_probs=38.2
Q ss_pred EEEEEEEeecCCC-CC----CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE----YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNIT 219 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~----~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~ 219 (413)
.+.|+|.+|.+|+ .+ .+|-||...+.......+.|..++++ ....|+.+..|.
T Consensus 23 ~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~ 80 (138)
T 1ugk_A 23 AFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKT---LDPAFDETFTFY 80 (138)
T ss_dssp EEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSC---SSCEEEEEEEEE
T ss_pred EEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCC---CCCcEeeEEEEc
Confidence 5789999999999 33 36899999887544456777665533 467788766664
No 4
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=74.94 E-value=10 Score=31.26 Aligned_cols=55 Identities=20% Similarity=0.248 Sum_probs=38.6
Q ss_pred EEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 163 LQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 163 ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
-.++|+|.+|.+|+ .+ .+|.||...+.......+.|..++++ ....|+.+..|.+
T Consensus 34 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 92 (143)
T 3f04_A 34 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT---LNPVFNEQFTFKV 92 (143)
T ss_dssp TEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSC---SSCEEEEEEEECC
T ss_pred CEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCC---CCCcCcCeEEEee
Confidence 35789999999999 33 56899999886544456777665543 3567886555554
No 5
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=73.32 E-value=10 Score=31.91 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=38.4
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.++|+|.+|.+|+ .+ .+|.||...+.......+.|..++++ ....|+.+..|.+
T Consensus 43 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 100 (152)
T 1rsy_A 43 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT---LNPVFNEQFTFKV 100 (152)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTC---SSCEEEEEEEECC
T ss_pred EEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCC---CCCcCcccEEEee
Confidence 6789999999999 33 46899999887544456667665533 4778886655543
No 6
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=71.30 E-value=22 Score=28.91 Aligned_cols=56 Identities=25% Similarity=0.312 Sum_probs=40.4
Q ss_pred CeEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 161 TELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 161 ~~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.....+|+|.+|.+|+ .+ .+|-||...+.+. ...+.|..++++ ....|+.+..|.+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t---~nP~wne~f~f~v 62 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNT---LDPKWNQHYDLYV 62 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSC---SSCEEEEEEEEEE
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCC---CCCCccCEEEEEe
Confidence 4567899999999998 44 4689999988642 356777665533 4678887766655
No 7
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=67.27 E-value=18 Score=29.34 Aligned_cols=54 Identities=13% Similarity=0.270 Sum_probs=37.5
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCC--cccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHR--HDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~--~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.++|+|.+|.+|+ .+ .+|.||...+... ....+.|..+.++ ....|+.+..|.+
T Consensus 17 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t---~nP~wne~f~f~~ 76 (137)
T 3rdl_A 17 KLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRST---LNPQWNESFTFKL 76 (137)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSC---SSCEEEEEEEEEC
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCC---CCCCcccEEEEEc
Confidence 5789999999999 34 4679999988542 2345667665533 4677886665554
No 8
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.51 E-value=19 Score=29.68 Aligned_cols=55 Identities=13% Similarity=0.208 Sum_probs=37.5
Q ss_pred eEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEE
Q psy7273 162 ELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNIT 219 (413)
Q Consensus 162 ~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~ 219 (413)
.-.++|+|.+|.+|+ .+ .+|.||...+.......+.|..++++ ....|+.+..|.
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~ 83 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKN---LNPHWNETFLFE 83 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTC---SSCCCCEEEEEC
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCC---CCCccccEEEEC
Confidence 346789999999999 44 46799999987544445666555432 356677665554
No 9
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=66.16 E-value=21 Score=30.03 Aligned_cols=54 Identities=17% Similarity=0.257 Sum_probs=37.2
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCcc--cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e--~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.++|+|.+|.+|+ .+ .+|.||.+.+.+... ..+.|..++++ ....|+.+..|.+
T Consensus 26 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 85 (159)
T 1tjx_A 26 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT---LNPYYNESFSFEV 85 (159)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC---SSCEEEEEEEEEC
T ss_pred EEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCC---CCCcccceEEEEc
Confidence 6789999999999 43 468999998864322 34566555532 4678886655554
No 10
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=65.83 E-value=29 Score=28.54 Aligned_cols=53 Identities=15% Similarity=0.155 Sum_probs=36.6
Q ss_pred EEEEEEEeecCCCCC---CCeeEEEeeeCCC--cccceecCcccCCCCCcceEEeEEEEEE
Q psy7273 164 QFRITVLQAVGISTE---YSDIFCQFNFLHR--HDEAFSTEPVKNTGKGTPLGFYHIQNIT 219 (413)
Q Consensus 164 tf~V~I~~a~Glp~~---~s~VfcQy~f~~~--~e~~~st~p~~~~~~~~~~~F~h~~~~~ 219 (413)
.++|+|.+|.|||.+ .+|-||...+... ....+.|..++++ ....|+.+..|.
T Consensus 21 ~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wnE~f~f~ 78 (134)
T 2b3r_A 21 TLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKT---RNPTFNEMLVYS 78 (134)
T ss_dssp EEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSC---SSCEEEEEEEEE
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCC---CCCCCccEEEEC
Confidence 578999999999953 5689999988642 2345667665533 356688665555
No 11
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=65.15 E-value=29 Score=28.83 Aligned_cols=54 Identities=9% Similarity=0.103 Sum_probs=37.0
Q ss_pred EEEEEEEeecCCC-CC----CCeeEEEeeeCCCcc--cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~----~s~VfcQy~f~~~~e--~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.++|+|++|.+|+ .+ .+|.||...+..... ..+.|..++++ ....|+.+..|.+
T Consensus 24 ~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 84 (148)
T 3fdw_A 24 SLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDT---VNPLYDETLRYEI 84 (148)
T ss_dssp EEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSC---SSCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCC---CCCcEeeEEEEEe
Confidence 5789999999999 33 468999998864332 24566555533 3567887666654
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=63.11 E-value=19 Score=31.01 Aligned_cols=57 Identities=14% Similarity=0.255 Sum_probs=40.1
Q ss_pred CeEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcc---cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 161 TELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHD---EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 161 ~~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e---~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
..=.++|+|++|.+|+ .+ .+|-||.+.+.+... ..+.|..+++ .....|+.+..|.+
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~---t~nP~Wne~f~f~v 69 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKK---SLNPKWNEEILFRV 69 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSS---CSSCEEEEEEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECC---CCCCcccceEEEEE
Confidence 4567899999999998 33 467999998875333 4566766553 34678887766665
No 13
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=61.94 E-value=22 Score=32.78 Aligned_cols=68 Identities=22% Similarity=0.264 Sum_probs=44.4
Q ss_pred EEEEEEEEeecCCCC-C---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEEEe
Q psy7273 163 LQFRITVLQAVGIST-E---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFE 238 (413)
Q Consensus 163 ltf~V~I~~a~Glp~-~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~iE 238 (413)
-.++|+|.+|.||+. + .+|-||...+.......+.|..+.++ ....|+.+..|.+ ..+ -+....|.|+
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~---~nP~wne~f~f~v--~~~---~~~~~~l~~~ 90 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT---LNPVFNEQFTFKV--PYS---ELAGKTLVMA 90 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSC---SSCEEEEEEEECC--CGG---GCTTCEEEEE
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCC---CCCeeCceEEEEe--chH---HhCcCEEEEE
Confidence 367899999999993 3 57899999887544446667665533 4667886655554 432 1234556666
No 14
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=61.10 E-value=30 Score=28.59 Aligned_cols=52 Identities=15% Similarity=0.135 Sum_probs=37.6
Q ss_pred EEEEEEEEeecCCCC-C---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 163 LQFRITVLQAVGIST-E---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 163 ltf~V~I~~a~Glp~-~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
=.++|+|.+|.||+. + .+|-||...+.+ ..+.|..+.++ ....|+.+..|.+
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~---~~~kT~~~~~t---~nP~Wne~f~f~v 72 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVGK---TKKRTKTIYGN---LNPVWEENFHFEC 72 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT---EEEECCCCCSC---SSCEEEEEEEEEE
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC---EEEECCccCCC---CCCCcccEEEEEe
Confidence 467899999999993 3 568999998843 35667665533 4667887666655
No 15
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=59.21 E-value=40 Score=28.54 Aligned_cols=54 Identities=17% Similarity=0.211 Sum_probs=37.8
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCc--ccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~--e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.+.|+|.+|.+|+ .+ .+|-||.+.+.+.. ...+.|..++++ ....|+.+..|.+
T Consensus 38 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 97 (166)
T 2cm5_A 38 GLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKT---LNPEFNEEFFYDI 97 (166)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSC---SSCEEEEEEEEEC
T ss_pred EEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCC---CCCcccceEEEEc
Confidence 6789999999999 33 46899999887532 245667665533 4677886655554
No 16
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.85 E-value=31 Score=28.12 Aligned_cols=53 Identities=21% Similarity=0.174 Sum_probs=38.4
Q ss_pred eEEEEEEEEeecCCC-CC--CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 162 ELQFRITVLQAVGIS-TE--YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 162 ~ltf~V~I~~a~Glp-~~--~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.-.++|+|.+|.+|+ .+ .+|-||...+.+. .+.|..++++ ....|+.+..|.+
T Consensus 6 ~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~---~~kT~v~~~t---~nP~wne~f~f~v 61 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKFGKPDPIVSVIFKDE---KKKTKKVDNE---LNPVWNEILEFDL 61 (140)
T ss_dssp CCEEEEEEEEEESCCCCSSSCCCEEEEEECSSC---EEECCCCCSC---SSCEEEEEEEEEC
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCE---eEEeeeecCC---CCCccCcEEEEEe
Confidence 346889999999999 44 5789999998853 4666665533 4677887766655
No 17
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=58.74 E-value=34 Score=31.96 Aligned_cols=68 Identities=22% Similarity=0.333 Sum_probs=46.3
Q ss_pred EEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEEEe
Q psy7273 163 LQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFE 238 (413)
Q Consensus 163 ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~iE 238 (413)
-.++|+|.+|.||| .+ .+|-||...+.......+.|..++++ ....|+.+..|.+ +.+ -+.+..|.|+
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t---~nP~wne~f~f~v--~~~---~l~~~~L~~~ 91 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKT---LNPIFNETFQFSV--PLA---ELAQRKLHFS 91 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSC---SSCEEEEEEEEEC--CGG---GGSSCCCEEE
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCC---CCCcEeeEEEEEe--cHH---HhcCCEEEEE
Confidence 36899999999999 33 46899999886444456777665533 4678887766665 432 1344567777
No 18
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.42 E-value=26 Score=28.75 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=36.8
Q ss_pred EEEEEEEeecCCC-CCC--CeeEEEeeeCCCcc--cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TEY--SDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~~--s~VfcQy~f~~~~e--~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.+.|+|.+|.+|+ .+. +|-||...+..... ..+.|..++++ ....|+.+..|.+
T Consensus 25 ~L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 83 (142)
T 2dmg_A 25 KLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKT---LNPVFDQSFDFSV 83 (142)
T ss_dssp EEEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSC---SSCEEEEEEEECC
T ss_pred EEEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCC---CCCCcCceEEEEe
Confidence 5789999999999 332 68999998875333 45667665533 4677886555543
No 19
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.43 E-value=10 Score=31.53 Aligned_cols=56 Identities=13% Similarity=0.166 Sum_probs=37.3
Q ss_pred EEEEEEEeecCCCCC-----------CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCH
Q psy7273 164 QFRITVLQAVGISTE-----------YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSK 224 (413)
Q Consensus 164 tf~V~I~~a~Glp~~-----------~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe 224 (413)
.+.|+|.+|.+|+.. .+|-||...+.......+.|..++++ ....|+.+..| .|+.
T Consensus 27 ~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t---~nP~wne~f~f--~v~~ 93 (147)
T 2enp_A 27 HLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKT---QKPVFEERYTF--EIPF 93 (147)
T ss_dssp EEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSC---SSCCCCBCCEE--CCCH
T ss_pred EEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCC---CCCeEeeeEEE--EeCh
Confidence 678999999999962 57899999887533345666554432 35566654444 3454
No 20
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=55.46 E-value=28 Score=28.28 Aligned_cols=54 Identities=17% Similarity=0.276 Sum_probs=38.2
Q ss_pred CeEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 161 TELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 161 ~~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
..=.++|+|.+|.||+ .+ .+|-||...+.+. .+.|..++++ ....|+.+..|.+
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~kT~~~~~t---~nP~wne~f~f~~ 68 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGND---RLQTHTVYKN---LNPEWNKVFTFPI 68 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTE---EEECCCCSSC---SSCCCCEEEEEEE
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCE---EEEeeeecCC---CCCccccEEEEEe
Confidence 4557889999999999 44 4679999988753 4566555532 4667776666655
No 21
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=55.21 E-value=28 Score=29.03 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=37.1
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCccc--ceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDE--AFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~--~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.+.|+|.+|.+|+ .+ .+|.||.+.+...... .+.|..+++ .....|+.+..|.+
T Consensus 31 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~---t~nP~wne~f~f~v 90 (153)
T 1w15_A 31 TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC---TPNAVFNELFVFDI 90 (153)
T ss_dssp EEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCS---CSSEEEEEEEEEEC
T ss_pred EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccC---CCCCeecceEEEEC
Confidence 6789999999999 33 4689999988643222 346666553 34788886666654
No 22
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=54.95 E-value=30 Score=27.96 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=37.0
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCcc--cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e--~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.++|+|.+|.+|+ .+ .+|.||.+.+.+... ..+.|..+.++ ....|+.+..|.+
T Consensus 17 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t---~nP~wne~f~f~v 76 (138)
T 3n5a_A 17 SIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRN---LNPIFNESFAFDI 76 (138)
T ss_dssp EEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSC---SSCEEEEEEEEEC
T ss_pred eEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCC---CCCcCcceEEEEC
Confidence 5789999999999 34 467999998875322 24556565533 4668886655554
No 23
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=54.88 E-value=21 Score=29.66 Aligned_cols=57 Identities=14% Similarity=0.272 Sum_probs=38.5
Q ss_pred CeEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcc---cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 161 TELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHD---EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 161 ~~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e---~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
..-.++|+|.+|.+|+ .+ .+|-||...+.+..+ ..+.|..+.++ ....|+.+..|.+
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 81 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKS---LNPKWNEEILFRV 81 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSC---SSCCCCEEEEEEE
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCC---CCCCCCCEEEEEe
Confidence 5567899999999999 33 567999998874332 45667665532 4667776666655
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=54.36 E-value=40 Score=27.96 Aligned_cols=54 Identities=11% Similarity=0.188 Sum_probs=37.8
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCc--ccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~--e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.++|+|.+|.+|+ .+ .+|-||...+.... ...+.|..+++ .....|+.+..|.+
T Consensus 32 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~---t~nP~wne~f~f~v 91 (149)
T 1a25_A 32 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKC---SLNPEWNETFRFQL 91 (149)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSS---CSSCEEEEEEEEEC
T ss_pred EEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCC---CCCCcCCcEEEEEe
Confidence 4889999999999 33 46899999887522 23566666553 24677887766655
No 25
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=53.98 E-value=46 Score=27.19 Aligned_cols=54 Identities=13% Similarity=0.289 Sum_probs=37.5
Q ss_pred EEEEEEEEeecCCC-CC---CCeeEEEeeeCCCc--ccceecCcccCCCCCcceEEeEEEEEE
Q psy7273 163 LQFRITVLQAVGIS-TE---YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNIT 219 (413)
Q Consensus 163 ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~--e~~~st~p~~~~~~~~~~~F~h~~~~~ 219 (413)
-.++|+|.+|.+|+ .+ .+|.||...+.+.. ...+.|..+++ .....|+.+..|.
T Consensus 29 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~---t~nP~wne~f~f~ 88 (142)
T 2chd_A 29 SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRN---TRNPVWNETLQYH 88 (142)
T ss_dssp TEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCS---CSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCC---CCCCcCcCEEEEc
Confidence 36789999999999 33 46899999887532 24566766553 2467788765554
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=51.53 E-value=45 Score=26.62 Aligned_cols=53 Identities=21% Similarity=0.243 Sum_probs=36.4
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCc--ccceecCcccCCCCCcceEEeEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNIT 219 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~--e~~~st~p~~~~~~~~~~~F~h~~~~~ 219 (413)
.+.|+|.+|.+|+ .+ .+|-||...+.... ...+.|..++++ ....|+.+..|.
T Consensus 19 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~ 77 (129)
T 2bwq_A 19 QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKT---LEPKWNQTFIYS 77 (129)
T ss_dssp EEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSB---SSCEEEEEEEEC
T ss_pred EEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCC---CCCccccEEEEc
Confidence 5789999999999 33 36799999886432 344667665532 466788665554
No 27
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=48.41 E-value=24 Score=28.93 Aligned_cols=53 Identities=21% Similarity=0.226 Sum_probs=36.0
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCcc-----------cceecCcccCCCCCcceEEeEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRHD-----------EAFSTEPVKNTGKGTPLGFYHIQNIT 219 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e-----------~~~st~p~~~~~~~~~~~F~h~~~~~ 219 (413)
.+.|+|.+|.||+ .+ .+|-||...+.+... ..+.|..+++ .....|+.+..|.
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~---t~nP~wne~f~f~ 86 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK---SLNPEWNQTVIYK 86 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHH---HHSCEEEEEEEEC
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCC---CCCCCCCCEEEEC
Confidence 5789999999999 33 568999999886432 2345554442 2366787765554
No 28
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=48.36 E-value=92 Score=25.01 Aligned_cols=56 Identities=16% Similarity=0.246 Sum_probs=39.7
Q ss_pred CCeEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 160 GTELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 160 g~~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
...=.++|+|.+|.+|+ .+ .+|-||.+.+.+. .+.|..+++ +.....|+.+..|.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~kT~~~~~--~~~nP~Wne~f~f~v 66 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQ---DQKSNVAEG--MGTTPEWNETFIFTV 66 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSC---EEECCCCTT--CCSSCEEEEEEEEEE
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCc---cceeEeccC--CCCCCccCcEEEEEE
Confidence 35667899999999999 44 4679999988754 355655441 234778887777766
No 29
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=44.41 E-value=69 Score=26.69 Aligned_cols=55 Identities=11% Similarity=0.161 Sum_probs=36.9
Q ss_pred EEEEEEEEeecCCC-C--CCCeeEEEeeeCCCc--ccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 163 LQFRITVLQAVGIS-T--EYSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 163 ltf~V~I~~a~Glp-~--~~s~VfcQy~f~~~~--e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
=.++|+|.+|.+|+ . ..+|.||.+.+.... ...+.|..++++ ....|+.+..|.+
T Consensus 27 ~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 86 (153)
T 3fbk_A 27 RVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDC---RDPAFHEHFFFPV 86 (153)
T ss_dssp SEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTC---SSCEEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCC---CCCccccEEEEec
Confidence 35789999999999 3 357899999886432 234566555532 4667876655544
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=44.37 E-value=59 Score=26.47 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=33.2
Q ss_pred EEEEEEEeecCCC-CC--------------CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE--------------YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~--------------~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
+.+|+|.+|.+|+ .+ .+|-||...+-+ .....|....+ .....|+.+..|.+
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~--~~~~~T~~~~~---t~nP~WnE~f~f~v 73 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD--SRIGQTATKQK---TNSPAWHDEFVTDV 73 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT--EEEEECCCCSS---CSSCEEEEEEEEEE
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC--eEeeeeeEECC---CcCCccCCEEEEEe
Confidence 6789999999999 44 288999988743 22334433332 23566776555544
No 31
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=39.28 E-value=79 Score=27.43 Aligned_cols=54 Identities=19% Similarity=0.152 Sum_probs=38.4
Q ss_pred CeEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 161 TELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 161 ~~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
..-+++|+|.+|.+|+ .+ -+|-||...+.+ ..+.|..++++ ....|+.+..|.+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~---~~~kT~v~~~t---lnP~Wne~f~f~v 91 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG---QSKKTEKCNNT---NSPKWKQPLTVIV 91 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT---EEEECCCCSSC---SSCEEEEEEEEEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC---EEeEccccCCC---CCCeECCEEEEEe
Confidence 3456899999999999 32 368999998865 46667655532 4677887766655
No 32
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=35.88 E-value=68 Score=27.42 Aligned_cols=54 Identities=11% Similarity=0.117 Sum_probs=36.2
Q ss_pred EEEEEEEeecCCC-CC----CCeeEEEeeeCCCcc--cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE----YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~----~s~VfcQy~f~~~~e--~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.+.|+|.+|.+|+ .+ .+|-||.+.+.+... ..+.|..++++ ....|+.+..|.+
T Consensus 31 ~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 91 (171)
T 2q3x_A 31 QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKT---LDPLYQQSLVFDE 91 (171)
T ss_dssp EEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSC---SSCEEEEEEECSS
T ss_pred EEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCC---CCCCCCcEEEEEe
Confidence 5789999999999 33 468999998875322 24566655533 3667876555543
No 33
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=35.81 E-value=48 Score=28.28 Aligned_cols=67 Identities=21% Similarity=0.272 Sum_probs=44.2
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCc-c--cceecCcccCCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRH-D--EAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLV 236 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~-e--~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~ 236 (413)
..+|+|++|.+|+ .+ .+|-||...+.... + ..+-|..++++ ....|+.+..|.| +.+- +....|.
T Consensus 44 ~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~t---lnP~wnE~F~f~v--~~~~---l~~~~L~ 115 (155)
T 2z0u_A 44 QFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDAS---DTLVFNEVFWVSM--SYPA---LHQKTLR 115 (155)
T ss_dssp EEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECC---SSEEEEEEEEEEC--CHHH---HHHCEEE
T ss_pred EEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCC---CCCccccEEEEEc--CHHH---hCcCEEE
Confidence 5689999999999 33 57899999887521 1 25667666533 4788987777765 5432 2334455
Q ss_pred Ee
Q psy7273 237 FE 238 (413)
Q Consensus 237 iE 238 (413)
|+
T Consensus 116 ~~ 117 (155)
T 2z0u_A 116 VD 117 (155)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 34
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=35.26 E-value=46 Score=26.96 Aligned_cols=53 Identities=21% Similarity=0.243 Sum_probs=34.4
Q ss_pred EEEEEEEeecCCC-CC---CCeeEEEeeeCCCc--ccceecCcccCCCCCcceEEeEEEEEE
Q psy7273 164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRH--DEAFSTEPVKNTGKGTPLGFYHIQNIT 219 (413)
Q Consensus 164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~--e~~~st~p~~~~~~~~~~~F~h~~~~~ 219 (413)
.++|+|.+|.+|+ .+ .+|.||...+.... ...+.|..++++ ....|+.+..|.
T Consensus 22 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t---~nP~wne~f~f~ 80 (141)
T 1v27_A 22 QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKT---LEPKWNQTFIYS 80 (141)
T ss_dssp EEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSC---SSCCCCCCCEEC
T ss_pred EEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCC---CCCccccEEEEc
Confidence 5789999999999 33 36899999886432 234566555432 345566544443
No 35
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=33.33 E-value=1.1e+02 Score=27.93 Aligned_cols=54 Identities=17% Similarity=0.262 Sum_probs=36.3
Q ss_pred EEEEEEEeecCCCC-C---CCeeEEEeeeCCCcc--cceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 164 QFRITVLQAVGIST-E---YSDIFCQFNFLHRHD--EAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 164 tf~V~I~~a~Glp~-~---~s~VfcQy~f~~~~e--~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.+.|+|.+|.+|+. + .+|.||...+..... ..+.|...+++ ....|+.+..|.+
T Consensus 151 ~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v 210 (284)
T 2r83_A 151 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT---LNPYYNESFSFEV 210 (284)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC---SSCEEEEEEEEEC
T ss_pred ceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCC---CCCEEceeEEEeC
Confidence 57899999999993 3 568999998864222 23456554433 3678887666655
No 36
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=32.93 E-value=1e+02 Score=30.81 Aligned_cols=53 Identities=11% Similarity=0.273 Sum_probs=38.2
Q ss_pred eEEEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 162 ELQFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 162 ~ltf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
.-+++|+|.+|.||+ .+ .+|-||.+.+.+ ..+.|..++++ ....|+.+..|.+
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~---~~~~T~~~~~t---~nP~w~e~f~f~~ 442 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMGS---QSYTTRTIQDT---LNPKWNFNCQFFI 442 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT---EEEECCCCSSC---SSCEEEEEEEEEE
T ss_pred CceEEEEeceeecCCCCCCCCCCCeEEEEEECC---eeccCCccCCC---CCCccCceEEEEe
Confidence 347899999999997 33 578999998853 36777666543 3667887666655
No 37
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=31.90 E-value=1.4e+02 Score=25.82 Aligned_cols=55 Identities=16% Similarity=0.111 Sum_probs=36.1
Q ss_pred CeEEEEEEEEeecCCC-CC-------------CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 161 TELQFRITVLQAVGIS-TE-------------YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 161 ~~ltf~V~I~~a~Glp-~~-------------~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
..=+.+|+|.+|.+|+ .+ .+|-||....-+ .....|...+++ ....++-+..|.|
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~--~~~~kT~v~~kt---lnP~WNE~F~f~v 95 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ--VRVGQTSTKQKT---NKPTYNEEFCANV 95 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT--EEEEECCCCSSC---SSCEEEEEEEEEE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC--EeeEEeeecCCC---CCCccCcEEEEEc
Confidence 3457899999999999 43 478999998753 234455443322 3556766655544
No 38
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.07 E-value=27 Score=25.62 Aligned_cols=27 Identities=19% Similarity=0.286 Sum_probs=21.3
Q ss_pred cCCCcHHHHHHHHHHHHhcccccccchH
Q psy7273 22 ECTWTEREFALAAWAFRKWKYHQFTSLR 49 (413)
Q Consensus 22 ~~~wt~~e~~lar~~~~kWk~~~~~sLr 49 (413)
...||++|.+++..++.+.- .+|-.++
T Consensus 12 ~~~WT~eE~~~F~~~~~~~g-k~w~~Ia 38 (61)
T 2eqr_A 12 MNVWTDHEKEIFKDKFIQHP-KNFGLIA 38 (61)
T ss_dssp CCSCCHHHHHHHHHHHHHST-TCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhC-CCHHHHH
Confidence 56799999999999999864 3555555
No 39
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=27.30 E-value=1.4e+02 Score=32.49 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=42.7
Q ss_pred CeEEEEEEEEeecCCCC-------CCCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273 161 TELQFRITVLQAVGIST-------EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV 220 (413)
Q Consensus 161 ~~ltf~V~I~~a~Glp~-------~~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v 220 (413)
..-.++|+|++|.||+. ..+|-||...+.+.....+.|..++++ ....|+.+..|.+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~t---lNPvWNEtF~F~v 79 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND---INPVWNETFEFIL 79 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC---SSCEEEEEEEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCC---CCCeeeeEEEEEe
Confidence 34578999999999997 367899999988654556677665532 4778887776666
No 40
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=25.46 E-value=47 Score=24.10 Aligned_cols=20 Identities=20% Similarity=0.162 Sum_probs=16.8
Q ss_pred cCCCcHHHHHHHHHHHHhcc
Q psy7273 22 ECTWTEREFALAAWAFRKWK 41 (413)
Q Consensus 22 ~~~wt~~e~~lar~~~~kWk 41 (413)
-..||++|.+++..++.+.-
T Consensus 8 ~~~WT~eED~~L~~~v~~~G 27 (60)
T 1x41_A 8 DPSWTAQEEMALLEAVMDCG 27 (60)
T ss_dssp CSSSCHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHC
Confidence 45799999999999998644
No 41
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=24.53 E-value=51 Score=23.81 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=19.6
Q ss_pred cCCCcHHHHHHHHHHHHhcccccccchH
Q psy7273 22 ECTWTEREFALAAWAFRKWKYHQFTSLR 49 (413)
Q Consensus 22 ~~~wt~~e~~lar~~~~kWk~~~~~sLr 49 (413)
-..||++|.+++..++.+--..+...++
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~W~~IA 36 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGNWADIA 36 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 4469999999999999864333333333
No 42
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=24.00 E-value=48 Score=25.77 Aligned_cols=20 Identities=35% Similarity=0.449 Sum_probs=17.3
Q ss_pred cCCCcHHHHHHHHHHHHhcc
Q psy7273 22 ECTWTEREFALAAWAFRKWK 41 (413)
Q Consensus 22 ~~~wt~~e~~lar~~~~kWk 41 (413)
...||++|.+++..++.+.-
T Consensus 18 ~~~WT~eEd~~Ll~~v~~~G 37 (79)
T 2yus_A 18 GREWTEQETLLLLEALEMYK 37 (79)
T ss_dssp SCCCCHHHHHHHHHHHHHSS
T ss_pred CCCcCHHHHHHHHHHHHHhC
Confidence 46799999999999999744
No 43
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.30 E-value=51 Score=24.41 Aligned_cols=27 Identities=30% Similarity=0.471 Sum_probs=20.3
Q ss_pred cCCCcHHHHHHHHHHHHhcccccccchH
Q psy7273 22 ECTWTEREFALAAWAFRKWKYHQFTSLR 49 (413)
Q Consensus 22 ~~~wt~~e~~lar~~~~kWk~~~~~sLr 49 (413)
...||++|.+++..++.+--. .|..++
T Consensus 9 ~~~WT~eE~~~Fe~~l~~yGK-df~~I~ 35 (63)
T 2yqk_A 9 EKCWTEDEVKRFVKGLRQYGK-NFFRIR 35 (63)
T ss_dssp CCSCCHHHHHHHHHHHHHTCS-CHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHhCc-cHHHHH
Confidence 457999999999999997554 343443
No 44
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.76 E-value=47 Score=25.05 Aligned_cols=20 Identities=20% Similarity=0.204 Sum_probs=16.6
Q ss_pred cCCCcHHHHHHHHHHHHhcc
Q psy7273 22 ECTWTEREFALAAWAFRKWK 41 (413)
Q Consensus 22 ~~~wt~~e~~lar~~~~kWk 41 (413)
-..||++|.+++..++.+.-
T Consensus 8 ~~~WT~eEd~~L~~~v~~~g 27 (75)
T 2yum_A 8 NQLWTVEEQKKLEQLLIKYP 27 (75)
T ss_dssp SSCCCHHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHhC
Confidence 45799999999999998643
No 45
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=20.70 E-value=1.1e+02 Score=23.31 Aligned_cols=49 Identities=16% Similarity=0.344 Sum_probs=34.1
Q ss_pred cCCCcHHHHHHHHHHHHhcc---cccccchHHHHHhhcccHHHHHHHHHHhcccc
Q psy7273 22 ECTWTEREFALAAWAFRKWK---YHQFTSLRDDLWGNAIFLKEANAISVELKKKT 73 (413)
Q Consensus 22 ~~~wt~~e~~lar~~~~kWk---~~~~~sLrE~l~~na~lvKEAN~IS~EL~K~V 73 (413)
...||++|..++.+|+.+.- -.|...+++.+ + =-++|--.-.++|.+.+
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l-g--Rt~~eV~~~y~~L~~d~ 59 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-G--RSVTDVTTKAKQLKDSV 59 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-T--SCHHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh-C--CCHHHHHHHHHHHHHhc
Confidence 34699999999999999765 24566777775 3 34555555566666654
Done!