Psyllid ID: psy7274

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQEDPNI
Secondary Structure (PSIPRED)
cccccccccccHHHHHHcccHHHHcccccccccccccccccccccccccccccccccccccHHHHccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccHHHHHccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
HccccHHHcccHHHHHccHHHcccccHHcEEEccccccEEccHHHcEccccccccccHHHccHHHcccEcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHcccccHHHHHHHHcccccccccHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHcccccHHHccccccccccHHccccHHHcccHHHHHccHHHcccccHHHccccHHHHHHHHccccccccccHHHHHccHHHcccccHHHccccccccccccccccccHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mlmfnphkrigvegalahpyleqyydpadepicdfglarvadpehdhtgfLTEYVAtrwyrapeimlnskgytksiDIWSVGCILAEmisnrpifpgkhyLDQLNHILgilgsptpedlSCIINEKARSYlqslpfkpkvpweilypnadpNALDLLGKmltfnphkrigvedalahpyleqyydpadepvswreNWGKMlmfnphkrigvegalahpyleqyydpadepvswreNWGKMlmfnphkrigvegalahpyleqyydpadepvaeepfrfsmelddlpkETLKRLIFEETRvfkqedpni
Flexible Loop (DISEMBL)
mlmfnphkriGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIfeetrvfkqedpni
Low Complexity Region (SEG)
MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQEDPNI
Disordered region (IsUnstruct)
********RIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA*********************TLKRLIFE************
Disordered Region (DISOPRED)
MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETR**K******
Disordered Region (DISEMBL)
MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQEDPNI
Disordered Region (DISPRO)
*LMFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQ*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQEDPNI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	308
FB|FBgn0003256	426	rl "rolled" [Drosophila melano	0.532	0.384	0.871	1.4e-78
UNIPROTKB|F1NRN9	320	MAPK1 "Uncharacterized protein	0.532	0.512	0.871	5.5e-77
UNIPROTKB|F1P066	321	MAPK1 "Uncharacterized protein	0.532	0.510	0.871	5.5e-77
ZFIN|ZDB-GENE-030722-2	369	mapk1 "mitogen-activated prote	0.532	0.444	0.865	5.5e-77
UNIPROTKB|P26696	361	mapk1 "Mitogen-activated prote	0.532	0.454	0.871	9e-77
UNIPROTKB|F1MI27	320	MAPK1 "Mitogen-activated prote	0.532	0.512	0.865	3.9e-76
UNIPROTKB|P46196	360	MAPK1 "Mitogen-activated prote	0.532	0.455	0.865	3.9e-76
UNIPROTKB|E2R2N2	360	MAPK1 "Uncharacterized protein	0.532	0.455	0.859	5e-76
UNIPROTKB|P28482	360	MAPK1 "Mitogen-activated prote	0.532	0.455	0.859	5e-76
UNIPROTKB|F1RL02	325	MAPK1 "Uncharacterized protein	0.532	0.504	0.859	5e-76

FB|FBgn0003256 rl "rolled" [Drosophila melanogaster (taxid:7227)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 143/164 (87%), Positives = 153/164 (93%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLAR+ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   225 DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 284

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILG+LGSP+ +DL CIINEKAR+YL+SLPFKP VPW  L+PN
Sbjct:   285 LSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPN 344

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             AD  ALDLLGKMLTFNPHKRI VE+ALAHPYLEQYYDP DEPV+
Sbjct:   345 ADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVA 388

GO:0004707 "MAP kinase activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=NAS;IDA;TAS

GO:0005737 "cytoplasm" evidence=NAS;IDA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IMP

GO:0004705 "JUN kinase activity" evidence=IDA

GO:0007369 "gastrulation" evidence=NAS

GO:0008595 "anterior/posterior axis specification, embryo" evidence=TAS

GO:0008293 "torso signaling pathway" evidence=NAS

GO:0000165 "MAPK cascade" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0045467 "R7 cell development" evidence=TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0043066 "negative regulation of apoptotic process" evidence=NAS

GO:0007507 "heart development" evidence=NAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=NAS

GO:0045500 "sevenless signaling pathway" evidence=NAS

GO:0050803 "regulation of synapse structure and activity" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP

GO:0071243 "cellular response to arsenic-containing substance" evidence=IDA

GO:0034614 "cellular response to reactive oxygen species" evidence=IDA

GO:0071276 "cellular response to cadmium ion" evidence=IDA

GO:0007067 "mitosis" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0019901 "protein kinase binding" evidence=IPI

GO:0046534 "positive regulation of photoreceptor cell differentiation" evidence=IMP

GO:0008134 "transcription factor binding" evidence=IPI

GO:0034334 "adherens junction maintenance" evidence=IMP

GO:0030054 "cell junction" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0050804 "regulation of synaptic transmission" evidence=IMP

GO:0048149 "behavioral response to ethanol" evidence=IMP

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0007552 "metamorphosis" evidence=IMP

GO:0090303 "positive regulation of wound healing" evidence=IMP

UNIPROTKB|F1NRN9 MAPK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 143/164 (87%), Positives = 151/164 (92%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   122 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 181

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   182 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 241

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             ADP ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEPV+
Sbjct:   242 ADPKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPVA 285

GO:0005524 "ATP binding" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

UNIPROTKB|F1P066 MAPK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 143/164 (87%), Positives = 151/164 (92%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   123 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 182

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   183 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 242

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             ADP ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEPV+
Sbjct:   243 ADPKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPVA 286

GO:0005524 "ATP binding" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

ZFIN|ZDB-GENE-030722-2 mapk1 "mitogen-activated protein kinase 1" [Danio rerio (taxid:7955)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 142/164 (86%), Positives = 151/164 (92%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   171 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 230

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP + KVPW  L+PN
Sbjct:   231 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINIKARNYLLSLPLRSKVPWNRLFPN 290

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             ADP ALDLL KMLTFNPHKRI VE+ALAHPYLEQYYDP DEPV+
Sbjct:   291 ADPKALDLLDKMLTFNPHKRIEVEEALAHPYLEQYYDPTDEPVA 334

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0007369 "gastrulation" evidence=IMP

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|P26696 mapk1 "Mitogen-activated protein kinase 1" [Xenopus laevis (taxid:8355)]

 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 143/164 (87%), Positives = 151/164 (92%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   165 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 224

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   225 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 284

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             ADP ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEPV+
Sbjct:   285 ADPKALDLLDKMLTFNPHKRIEVEAALAHPYLEQYYDPSDEPVA 328

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0070849 "response to epidermal growth factor stimulus" evidence=ISS

UNIPROTKB|F1MI27 MAPK1 "Mitogen-activated protein kinase 1" [Bos taurus (taxid:9913)]

 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 142/164 (86%), Positives = 150/164 (91%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   122 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 181

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   182 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 241

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             AD  ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEPV+
Sbjct:   242 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPVA 285

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P46196 MAPK1 "Mitogen-activated protein kinase 1" [Bos taurus (taxid:9913)]

 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 142/164 (86%), Positives = 150/164 (91%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   222 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             AD  ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEPV+
Sbjct:   282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPVA 325

GO:0005737 "cytoplasm" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0070849 "response to epidermal growth factor stimulus" evidence=ISS

GO:0005819 "spindle" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R2N2 MAPK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 141/164 (85%), Positives = 150/164 (91%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   222 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             AD  ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEP++
Sbjct:   282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIA 325

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P28482 MAPK1 "Mitogen-activated protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 141/164 (85%), Positives = 150/164 (91%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   222 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             AD  ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEP++
Sbjct:   282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIA 325

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0000189 "MAPK import into nucleus" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0019233 "sensory perception of pain" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0032839 "dendrite cytoplasm" evidence=IEA

GO:0033267 "axon part" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0043204 "perikaryon" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0043627 "response to estrogen stimulus" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0045727 "positive regulation of translation" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=ISS

GO:0038127 "ERBB signaling pathway" evidence=IDA

GO:0019902 "phosphatase binding" evidence=IPI

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IDA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IDA;TAS

GO:0032872 "regulation of stress-activated MAPK cascade" evidence=TAS

GO:0090170 "regulation of Golgi inheritance" evidence=TAS

GO:2000641 "regulation of early endosome to late endosome transport" evidence=TAS

GO:0005634 "nucleus" evidence=IDA;TAS

GO:0005739 "mitochondrion" evidence=TAS

GO:0005769 "early endosome" evidence=TAS

GO:0005770 "late endosome" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005925 "focal adhesion" evidence=TAS

GO:0005856 "cytoskeleton" evidence=TAS

GO:0051493 "regulation of cytoskeleton organization" evidence=TAS

GO:0005901 "caveola" evidence=TAS

GO:0072584 "caveolin-mediated endocytosis" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0070849 "response to epidermal growth factor stimulus" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006917 "induction of apoptosis" evidence=TAS

GO:0006935 "chemotaxis" evidence=TAS

GO:0006950 "response to stress" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0000165 "MAPK cascade" evidence=TAS

GO:0000186 "activation of MAPKK activity" evidence=TAS

GO:0000187 "activation of MAPK activity" evidence=TAS

GO:0002224 "toll-like receptor signaling pathway" evidence=TAS

GO:0002755 "MyD88-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0002756 "MyD88-independent toll-like receptor signaling pathway" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0007265 "Ras protein signal transduction" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0034130 "toll-like receptor 1 signaling pathway" evidence=TAS

GO:0034134 "toll-like receptor 2 signaling pathway" evidence=TAS

GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS

GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS

GO:0035666 "TRIF-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0051090 "regulation of sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0051403 "stress-activated MAPK cascade" evidence=TAS

GO:0060397 "JAK-STAT cascade involved in growth hormone signaling pathway" evidence=TAS

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|F1RL02 MAPK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 141/164 (85%), Positives = 150/164 (91%)

Query:    29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
             D  ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM
Sbjct:   127 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 186

Query:    89 ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +SNRPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PN
Sbjct:   187 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 246

Query:   149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             AD  ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEP++
Sbjct:   247 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIA 290

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	308
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-120
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-99
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-78
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-75
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-74
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-73
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-69
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-69
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-58
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-54
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-53
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-53
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-53
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-52
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-51
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-49
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-46
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-44
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-44
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-43
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-42
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-42
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-41
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-41
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-40
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	8e-39
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-37
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-37
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-36
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-36
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	7e-36
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	9e-36
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-35
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-35
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-35
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-34
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-34
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-34
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	7e-33
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-32
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-32
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	9e-32
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-31
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-31
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-31
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-29
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-28
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-28
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-27
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-27
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-27
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-25
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-24
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-24
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	5e-23
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-22
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-20
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	4e-20
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-19
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	7e-19
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-18
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-16
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-15
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-15
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	9e-15
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	7e-14
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-14
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-13
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-13
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-13
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-12
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-11
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-11
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-11
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-11
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-10
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	6e-10
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	8e-10
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	9e-10
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-09
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-09
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	1e-09
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-09
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-09
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-08
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-08
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	7e-08
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-08
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-07
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-07
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	3e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	5e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	7e-07
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	9e-07
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-06
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-06
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-06
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	5e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	6e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	7e-06
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	7e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	7e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-05
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-05
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-05
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	5e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	7e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	7e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	9e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-04
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	3e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-04
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	4e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	5e-04
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	5e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-04
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	6e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-04
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	6e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	6e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	6e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	8e-04
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	9e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	0.001
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	0.001
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.001
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.001
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	0.001
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.001
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.001
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	0.001
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.001
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.001
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.002
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.002
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.003
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.003
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.004
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.004

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  348 bits (896), Expect = e-120
 Identities = 134/164 (81%), Positives = 152/164 (92%)

Query: 29  DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           D  ICDFGLAR+ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTK+IDIWSVGCILAEM
Sbjct: 144 DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEM 203

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           +SNRP+FPGK YL QLN ILG+LG+P+ EDL+CII+ +AR+Y++SLPFKPKVPW  L+PN
Sbjct: 204 LSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPN 263

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
           ADP ALDLL KMLTFNPHKRI VE+ALAHPYLEQY+DP+DEPV+
Sbjct: 264 ADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVA 307

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  294 bits (755), Expect = 4e-99
 Identities = 102/161 (63%), Positives = 128/161 (79%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           ICDFGLAR  DP+ D  GFLTEYV TRWYRAPE++L+S  YTK+IDIWSVGCI AE+++ 
Sbjct: 144 ICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTR 203

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P+FPG+ Y+DQLN I+ +LG+P+ EDL  I +EKAR+YL+SLP KPK P   L+P A P
Sbjct: 204 KPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASP 263

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            A+DLL KML F+P KRI  ++ALAHPYL Q +DP DEPV+
Sbjct: 264 EAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVA 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score =  241 bits (617), Expect = 2e-78
 Identities = 98/161 (60%), Positives = 126/161 (78%), Gaps = 1/161 (0%)

Query: 32  ICDFGLARVADPEH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           ICDFGLAR       ++ GF+TEYVATRWYRAPEIML+ + YTK+ID+WSVGCILAE++ 
Sbjct: 146 ICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLG 205

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +P+F GK Y+DQLN IL +LG+P  E LS I + KA++Y++SLP  PK P+E ++PNA+
Sbjct: 206 RKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNAN 265

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
           P ALDLL K+L F+P KRI VE+AL HPYL  ++DP DEPV
Sbjct: 266 PLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEPV 306

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  233 bits (597), Expect = 2e-75
 Identities = 95/163 (58%), Positives = 121/163 (74%), Gaps = 3/163 (1%)

Query: 29  DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           D  ICDFGLAR    + D   F+TEYV TRWYRAPE++LN   YT +ID+WSVGCI AE+
Sbjct: 146 DLKICDFGLARTTSEKGD---FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAEL 202

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           +  +P+FPGK Y+ QL  I  +LGSP+ EDL  I NEKAR Y++SLP+ P+  +  L+P+
Sbjct: 203 LGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPH 262

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
           A+P A+DLL KML F+P KRI VE+ALAHPYL   +DP+DEPV
Sbjct: 263 ANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPV 305

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  228 bits (583), Expect = 6e-74
 Identities = 78/149 (52%), Positives = 95/149 (63%), Gaps = 4/149 (2%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR            T YV TRWYRAPE++L  KGY+  +DIWSVGCI AE++S 
Sbjct: 139 LADFGLARSFGSPVR---PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSR 195

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           RP+FPGK  +DQL  I   LG+P PE      +  AR+Y  S P K  +P   L+PNA P
Sbjct: 196 RPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS-LARNYKFSFPKKAGMPLPKLFPNASP 254

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            ALDLL +ML ++PHKRI  E ALAHPY 
Sbjct: 255 QALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  229 bits (586), Expect = 1e-73
 Identities = 89/161 (55%), Positives = 116/161 (72%), Gaps = 1/161 (0%)

Query: 32  ICDFGLARVADPEH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFG+AR       +H  F+TEYVATRWYRAPE++L+   YT +ID+WSVGCI AEM+ 
Sbjct: 148 IGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG 207

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            R +FPGK+Y+ QL  IL +LGSP+ E L+ I +++ R Y+Q+LP K  VPW  ++P A 
Sbjct: 208 RRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKAS 267

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
           P ALDLL +ML F+P +RI VE AL HP+L QY+DP DEP 
Sbjct: 268 PEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEPT 308

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  219 bits (559), Expect = 2e-69
 Identities = 85/161 (52%), Positives = 115/161 (71%), Gaps = 6/161 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR  D E      +T YVATRWYRAPEIMLN   Y +++DIWSVGCI+AE+++ 
Sbjct: 159 ILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 212

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           + +FPG  ++DQL  I+ ++G+P  E L  I +E AR+Y+QSLP  PK  ++ ++  A+P
Sbjct: 213 KTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANP 272

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            A+DLL KML  +P KRI   +ALAHPYL +Y+DP DEPV+
Sbjct: 273 LAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEPVA 313

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  218 bits (557), Expect = 3e-69
 Identities = 82/162 (50%), Positives = 113/162 (69%), Gaps = 2/162 (1%)

Query: 32  ICDFGLARVADPEHDHTGF--LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           + DFGLAR      ++     LT+YVATRWYRAPEI+L S  YTK +D+WSVGCIL EM+
Sbjct: 148 LADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEML 207

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
             +P+FPG   L+QL  I+ ++G P+ ED+  I +  A + L SLP +P+ P + L P A
Sbjct: 208 LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA 267

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
             +ALDLL K+L FNP+KR+  E+AL HPY+ Q+++P+DEPV
Sbjct: 268 SDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPV 309

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  190 bits (485), Expect = 1e-58
 Identities = 83/164 (50%), Positives = 114/164 (69%), Gaps = 6/164 (3%)

Query: 29  DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           D  ICDFGLAR+ DP+      +T YV+TR+YRAPEIML  + Y   +DIWS GCI AEM
Sbjct: 146 DLKICDFGLARIQDPQ------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           +  +P+FPGK +++Q + I  +LG+P  + ++ I +E    ++QSLP +  VP+   + N
Sbjct: 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKN 259

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
           ADP+A+DLL KML F+P KRI   +ALAHPYL  Y+DP DEPV+
Sbjct: 260 ADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPVA 303

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  179 bits (456), Expect = 2e-54
 Identities = 85/159 (53%), Positives = 111/159 (69%), Gaps = 6/159 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR AD E      +T YVATRWYRAPEIMLN   Y +++DIWSVGCI+AE++  
Sbjct: 159 ILDFGLARQADDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG 212

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           + +FPG  Y+DQL  I+ ++G+P+PE L  I +E AR Y+QSLP  P+   + ++  A+P
Sbjct: 213 KALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANP 272

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A+DLL KML  +  KRI   +ALAHPY  QY+DP DEP
Sbjct: 273 LAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPEDEP 311

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score =  178 bits (452), Expect = 1e-53
 Identities = 84/161 (52%), Positives = 110/161 (68%), Gaps = 6/161 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR  D E      +T YVATRWYRAPEIMLN   Y +++DIWSVGCI+AE+++ 
Sbjct: 161 ILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 214

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           R +FPG  ++DQL  IL ++G+P  E L  I +E AR+Y+QSL   PK+ +  ++  A+P
Sbjct: 215 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP 274

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            A+DLL KML  +  KRI    ALAH Y  QY+DP DEPV+
Sbjct: 275 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 315

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  175 bits (447), Expect = 2e-53
 Identities = 70/152 (46%), Positives = 89/152 (58%), Gaps = 11/152 (7%)

Query: 32  ICDFGLAR---VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + DFGLAR   +    + H       V T WYRAPEI+L SK Y+ ++DIWSVGCI AEM
Sbjct: 139 LADFGLARAFGIPLRTYTHE------VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEM 192

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           I+ +P+FPG   +DQL  I  ILG+PT E    +   K   Y  + P  P    E + P 
Sbjct: 193 ITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV--TKLPDYKPTFPKFPPKDLEKVLPR 250

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            DP  +DLL KML +NP KRI  ++AL HPY 
Sbjct: 251 LDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  176 bits (449), Expect = 3e-53
 Identities = 83/163 (50%), Positives = 110/163 (67%), Gaps = 3/163 (1%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM--LNSKGYTKSIDIWSVGCILAEMI 89
           ICDFGLARVA  +     F T+YVATRWYRAPE+     SK YT +IDIWS+GCI AE++
Sbjct: 144 ICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVL 202

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           + +P+FPGK+ + QL+ I  +LG+P+PE +S + NEKAR YL S+  K  VP+   +PNA
Sbjct: 203 TGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNA 262

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
           DP AL LL ++L F+P  R   E+ALA PY +       EP +
Sbjct: 263 DPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSA 305

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  175 bits (444), Expect = 2e-52
 Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 6/159 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR AD E      +T YV TRWYRAPE++LN   Y +++DIWSVGCI+AEM++ 
Sbjct: 158 ILDFGLARHADAE------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG 211

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           + +F GK YLDQL  IL + G P PE +  + ++ A+SY++SLP  P+  +  L+P A P
Sbjct: 212 KTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASP 271

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A+DLL KML  +  KR+   +AL HPY + + D  +E 
Sbjct: 272 QAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEET 310

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score =  173 bits (439), Expect = 1e-51
 Identities = 71/161 (44%), Positives = 106/161 (65%), Gaps = 1/161 (0%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR+ DP + H G+L+E + T+WYR+P ++L+   YTK+ID+W+ GCI AEM++ 
Sbjct: 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 215

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P+F G H L+Q+  IL  +     ED + ++N    S++++   +P+ P   L P  +P
Sbjct: 216 KPLFAGAHELEQMQLILESVPVVREEDRNELLNVIP-SFVRNDGGEPRRPLRDLLPGVNP 274

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            ALD L ++LTFNP  R+  E+AL HPY+  Y  P DEPVS
Sbjct: 275 EALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVS 315

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  167 bits (424), Expect = 2e-49
 Identities = 75/159 (47%), Positives = 108/159 (67%), Gaps = 6/159 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR  D E      +T YV TRWYRAPE++LN   YT+++DIWSVGCI+AEM++ 
Sbjct: 159 ILDFGLARQTDSE------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG 212

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P+F G  +LDQL  I+ + G+P+ E +  + +E A++Y++ LP   K  +  L PNA+P
Sbjct: 213 KPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANP 272

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A+++L KML  +   RI   +ALAHPY E+++DP DE 
Sbjct: 273 LAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDET 311

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  157 bits (399), Expect = 3e-46
 Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 19/157 (12%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR+   E       +  VATRWYRAPE++  ++ Y   +D+W+VGCI AE+++ 
Sbjct: 140 IADFGLARLFSEEEPRL--YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP------FKPKVP--WE 143
            P+FPG++ ++QL  +   LG+P  E             L SLP      F    P   E
Sbjct: 198 SPLFPGENDIEQLAIVFRTLGTPNEETW---------PGLTSLPDYNKITFPESKPIPLE 248

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            ++P+A P ALDLL  +L ++P KR+   +AL HPY 
Sbjct: 249 EIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  154 bits (392), Expect = 1e-44
 Identities = 74/171 (43%), Positives = 103/171 (60%), Gaps = 21/171 (12%)

Query: 32  ICDFGLARVADPEHDHTGFL-TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFGLAR A      T F+ T YV TR+YRAPE++L   GY +++DIWSVGCI+ EMI 
Sbjct: 159 ILDFGLARTAG-----TSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIR 212

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP--- 147
              +FPG  ++DQ N I+  LG+P+ E +S  +    R+Y+++ P      +E L+P   
Sbjct: 213 GTVLFPGTDHIDQWNKIIEQLGTPSDEFMS-RLQPTVRNYVENRPKYAGYSFEELFPDVL 271

Query: 148 ----NADPNAL------DLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
               +   N L      DLL KML  +P KRI V+DAL HPY+  +YDP++
Sbjct: 272 FPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSE 322

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  151 bits (383), Expect = 6e-44
 Identities = 64/155 (41%), Positives = 87/155 (56%), Gaps = 17/155 (10%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR       +T    +YV+TRWYRAPEI+L S  Y+  +DIW++GCI+AE+ + 
Sbjct: 140 IADFGLAREIRSRPPYT----DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTL 195

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPED------LSCIINEKARSYLQSLPFKPKVPWEIL 145
           RP+FPG   +DQL  I  +LG+PT +D      L+  +  +        P         L
Sbjct: 196 RPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR-------FPQFAPTSLHQL 248

Query: 146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            PNA P A+DL+  ML ++P KR     AL HPY 
Sbjct: 249 IPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  150 bits (381), Expect = 2e-43
 Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 14/152 (9%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P       +T  V TRWYRAPE++  ++ Y   +D+WSVGCI AE++ 
Sbjct: 143 LADFGLARSFGSPN----RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLL 198

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPE---DLSCIINEKARSYLQSLPFKPKVPWEILYP 147
             P  PG   +DQL  I   LG+PT E    ++ + +     Y++  PF P  P + ++P
Sbjct: 199 RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD-----YVEFKPFPPT-PLKQIFP 252

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
            A  +ALDLL ++LT NP+KRI    AL HPY
Sbjct: 253 AASDDALDLLQRLLTLNPNKRITARQALEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  149 bits (377), Expect = 3e-42
 Identities = 69/156 (44%), Positives = 100/156 (64%), Gaps = 11/156 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           ICDFGLARV +P  D +  +T+ V T++YRAPEI++ S+ YT ++DIWSVGCI AE++  
Sbjct: 144 ICDFGLARVEEP--DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGR 201

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLS--CIINEKARSYLQSLPFKPKVPWEILYPNA 149
           R +F  +  + QL+ I  +LG+P+ E +   C   E AR+++   P KP     +LY  +
Sbjct: 202 RILFQAQSPIQQLDLITDLLGTPSLEAMRSAC---EGARAHILRGPHKPPS-LPVLYTLS 257

Query: 150 DPN---ALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
                 A+ LL +ML F+P KRI   DALAHPYL++
Sbjct: 258 SQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  145 bits (369), Expect = 7e-42
 Identities = 66/153 (43%), Positives = 83/153 (54%), Gaps = 17/153 (11%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR+    +     LT  V T WYRAPE++L S  Y   +D+WSVGCI AE+   
Sbjct: 148 IADFGLARI----YSFEMALTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRR 202

Query: 92  RPIFPGKHYLDQLNHILGILGSPT----PEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
           RP+F G    DQL+ I  ++G P+    P ++S       RS   S P      ++   P
Sbjct: 203 RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL-----PRS---SFPSYTPRSFKSFVP 254

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
                 LDLL KMLTFNPHKRI   +AL HPY 
Sbjct: 255 EICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  143 bits (364), Expect = 4e-41
 Identities = 64/161 (39%), Positives = 81/161 (50%), Gaps = 28/161 (17%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR     +      T  V T WYR PE++L +  Y   +D+WSVGCILAE+   
Sbjct: 141 LADFGLARPYTKRNS--ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG 198

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP----FKPKVPWEILYP 147
           +PIF G   L+QL  I  + GSPT E+            +  LP     KPK P    Y 
Sbjct: 199 KPIFQGSTELEQLEKIFELCGSPTDENW---------PGVSKLPWFENLKPKKP----YK 245

Query: 148 N---------ADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
                      DP+ALDLL K+LT +P KRI  + AL H Y
Sbjct: 246 RRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  143 bits (363), Expect = 6e-41
 Identities = 67/159 (42%), Positives = 89/159 (55%), Gaps = 24/159 (15%)

Query: 32  ICDFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           ICDFGLAR    P        T+ V T WYRAPE++L +K Y+ +ID+WSVGCI AE+++
Sbjct: 147 ICDFGLAREYGSPLKP----YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT 202

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP------FKPKVPWEI 144
            +P+FPGK  +DQLN I  +LG+P          EK       LP      F      ++
Sbjct: 203 KKPLFPGKSEIDQLNKIFKLLGTP---------TEKIWPGFSELPGAKKKTFTKYPYNQL 253

Query: 145 --LYPNA--DPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
              +P      N  DLL ++LT++P KRI  EDAL HPY
Sbjct: 254 RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  141 bits (357), Expect = 4e-40
 Identities = 68/149 (45%), Positives = 89/149 (59%), Gaps = 7/149 (4%)

Query: 32  ICDFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P +    F  E V T WYRAP+++L S+ Y+ SIDIWSVGCI+AEMI+
Sbjct: 141 LADFGLARAFGIPVNT---FSNE-VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMIT 196

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            RP+FPG +  DQL  I  I+G+PT      I       Y  + P  P    + L+P+AD
Sbjct: 197 GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ--LPEYKPTFPRYPPQDLQQLFPHAD 254

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPY 179
           P  +DLL ++L  NP  RI   DAL HP+
Sbjct: 255 PLGIDLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  137 bits (348), Expect = 8e-39
 Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 10/148 (6%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           DFG  R    +  +T    EY++TRWYRAPE +L    Y   +DIW+VGC+  E++S  P
Sbjct: 142 DFGSCRGIYSKPPYT----EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP 197

Query: 94  IFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI--LYPNADP 151
           +FPG + LDQ+  I  +LG+P  E    ++ +  +S   +  F  K    +  L PNA  
Sbjct: 198 LFPGTNELDQIAKIHDVLGTPDAE----VLKKFRKSRHMNYNFPSKKGTGLRKLLPNASA 253

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPY 179
             LDLL K+L ++P +RI  + AL HPY
Sbjct: 254 EGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  135 bits (342), Expect = 1e-37
 Identities = 65/164 (39%), Positives = 85/164 (51%), Gaps = 25/164 (15%)

Query: 32  ICDFGLARVAD-----PEHDHTGFLTEY---VATRWYRAPEIMLNSKGYTKSIDIWSVGC 83
           I DFGLAR  D     P+    G   +Y   V TRWYR PE++L  + YT ++DIW +GC
Sbjct: 156 IADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGC 215

Query: 84  ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE 143
           + AEM + RPI  GK  +DQL+ I  + G+PT E              +SLP    V   
Sbjct: 216 VFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETW---------PGWRSLPGCEGVHSF 266

Query: 144 ILYPNA--------DPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
             YP           P  LDLL K+L+ +P+KR+   DAL HPY
Sbjct: 267 TNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  134 bits (340), Expect = 1e-37
 Identities = 68/157 (43%), Positives = 88/157 (56%), Gaps = 21/157 (13%)

Query: 32  ICDFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P   +T      V T WYRAPEI+L S+ Y+  +DIWS+GCI AEM++
Sbjct: 140 LADFGLARAFGVPVRTYT----HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN 195

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP-FKPKVP------WE 143
            RP+FPG   +DQL  I   LG+P         +E     + SLP +KP  P        
Sbjct: 196 RRPLFPGDSEIDQLFRIFRTLGTP---------DEDVWPGVTSLPDYKPTFPKWARQDLS 246

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            + PN D + LDLL KML ++P KRI  + AL HPY 
Sbjct: 247 KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  131 bits (332), Expect = 1e-36
 Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 32/149 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR  DP       LT +V T  Y APE+ L  KGY K++DIWS+G IL E+++ 
Sbjct: 138 LADFGLARQLDP----GEKLTTFVGTPEYMAPEV-LLGKGYGKAVDIWSLGVILYELLTG 192

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P FPG    DQL  +   +G P P                               +  P
Sbjct: 193 KPPFPGD---DQLLELFKKIGKPKPPFPPP------------------------EWDISP 225

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            A DL+ K+L  +P KR+  E+AL HP+ 
Sbjct: 226 EAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  132 bits (334), Expect = 1e-36
 Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 5/151 (3%)

Query: 32  ICDFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           +CDFG AR +          LT+YVATRWYRAPE+++    Y K +D+W++GCI+AE++ 
Sbjct: 141 LCDFGFARALRARPASP---LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLD 197

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA- 149
             P+FPG   +DQL  I   LG   P       +    + +           E  YP   
Sbjct: 198 GEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKV 257

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
              ALD L   L  +P +R+  ++ L HPY 
Sbjct: 258 SSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score =  132 bits (332), Expect = 7e-36
 Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 20/170 (11%)

Query: 32  ICDFGLARVADPEHDHTGFL-TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFGLAR A      T F+ T YV TR+YRAPE++L   GY +++DIWSVGCI+ E++ 
Sbjct: 164 ILDFGLARTAC-----TNFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGELVK 217

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN-- 148
              IF G  ++DQ N ++  LG+P+ E ++ +     R+Y+++ P  P + +E L+P+  
Sbjct: 218 GSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQ-PTVRNYVENRPQYPGISFEELFPDWI 276

Query: 149 ----------ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
                         A DLL KML  +P KRI V++AL HPY+  +YDPA+
Sbjct: 277 FPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE 326

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score =  131 bits (331), Expect = 9e-36
 Identities = 71/170 (41%), Positives = 105/170 (61%), Gaps = 20/170 (11%)

Query: 32  ICDFGLARVADPEHDHTGFL-TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFGLAR A      T F+ T YV TR+YRAPE++L   GY +++DIWSVGCI+ EM+ 
Sbjct: 160 ILDFGLARTAG-----TSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVR 213

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA- 149
           ++ +FPG+ Y+DQ N ++  LG+P PE +   +    R+Y+++ P    + +  L+P++ 
Sbjct: 214 HKILFPGRDYIDQWNKVIEQLGTPCPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDSL 272

Query: 150 -----------DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
                         A DLL KML  +P KRI V++AL HPY+  +YDPA+
Sbjct: 273 FPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDPAE 322

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  130 bits (328), Expect = 1e-35
 Identities = 59/163 (36%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLAR+ +        L   V T WYRAPE++L ++ YTK+IDIW++GCI AE+++ 
Sbjct: 153 IGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL 212

Query: 92  RPIFPGK---------HYLDQLNHILGILGSPTPEDLSCIIN----EKARSYLQSLPFK- 137
            PIF G+            DQL  I  +LG+PT +D   I      +      ++  +  
Sbjct: 213 EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS 272

Query: 138 -PKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
                W   +   D    DLL K+L ++P KRI  E+AL HPY
Sbjct: 273 NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  130 bits (329), Expect = 1e-35
 Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 17/174 (9%)

Query: 32  ICDFGLAR--VADPEHDHTGF---------LTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           I DFGLAR     P  D             +T  V T WYRAPE+++ ++ Y  ++D+WS
Sbjct: 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWS 219

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           VGCI AE+++ +P+FPG++ +DQL  I  +LG  TP + +    +K   Y +  P KPK 
Sbjct: 220 VGCIFAELLTGKPLFPGENEIDQLGRIFELLG--TPNEDNWPQAKKLPLYTEFTPRKPK- 276

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY---YDPADEPV 191
             + ++PNA  +A+DLL  +L  NP +RI  ++AL H Y +      DP+  P 
Sbjct: 277 DLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCDPSQLPF 330

Length = 335

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  128 bits (323), Expect = 3e-35
 Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 27/149 (18%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA+        +  LT +V T WY APE++L   GY   +D+WS+G IL E+++ 
Sbjct: 139 IADFGLAKKL---LKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTG 195

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P F G++ LDQL  I  ILG P   D                                 
Sbjct: 196 KPPFSGENILDQLQLIRRILGPPLEFD-----------------------EPKWSSG-SE 231

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            A DL+ K L  +P KR   E+ L HP+ 
Sbjct: 232 EAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  127 bits (321), Expect = 1e-34
 Identities = 63/170 (37%), Positives = 89/170 (52%), Gaps = 23/170 (13%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR           +T  V T WYRAPE++L    YT +ID+W+VGCILAE++++
Sbjct: 149 IADFGLARTY---GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH 205

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP----FK-PKVPWEIL- 145
           +P+ PGK  ++QL+ I+ +LG+P         NE        LP    F  PK P+  L 
Sbjct: 206 KPLLPGKSEIEQLDLIIQLLGTP---------NESIWPGFSDLPLVGKFTLPKQPYNNLK 256

Query: 146 --YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL-EQYY--DPADEP 190
             +P      L LL  +L ++P KR   E+AL   Y  E+    +P   P
Sbjct: 257 HKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPEMMP 306

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  126 bits (317), Expect = 2e-34
 Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 21/156 (13%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P   +T      V T WYRAPEI+L  K Y+ ++DIWS+GCI AEM++
Sbjct: 141 LADFGLARAFGVPVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 196

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP-FKPKVP-W-----E 143
            R +FPG   +DQL  I   LG+P         +E     + SLP +KP  P W      
Sbjct: 197 RRALFPGDSEIDQLFRIFRTLGTP---------DEVVWPGVTSLPDYKPSFPKWARQDFS 247

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
            + P  D +  DLL +ML ++P+KRI  + ALAHP+
Sbjct: 248 KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score =  127 bits (320), Expect = 4e-34
 Identities = 71/170 (41%), Positives = 101/170 (59%), Gaps = 20/170 (11%)

Query: 32  ICDFGLARVADPEHDHTGFLTE-YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFGLAR A      T F+   YV TR+YRAPE++L   GY +++DIWSVGCI+ EMI 
Sbjct: 167 ILDFGLARTAG-----TSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIK 220

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN-- 148
              +FPG  ++DQ N ++  LG+P PE +   +    R+Y+++ P      +E L+P+  
Sbjct: 221 GGVLFPGTDHIDQWNKVIEQLGTPCPEFMK-KLQPTVRTYVENRPKYAGYSFEKLFPDVL 279

Query: 149 --AD--------PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
             AD          A DLL KML  +  KRI V++AL HPY+  +YDP++
Sbjct: 280 FPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  122 bits (308), Expect = 7e-33
 Identities = 66/158 (41%), Positives = 86/158 (54%), Gaps = 21/158 (13%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P        T  V T WYRAPEI+L S+ Y+  +DIWSVGCI AEM++
Sbjct: 144 LADFGLARAFGIPVRT----FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN 199

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP-FKPKVP-W-----E 143
            +P+FPG   +D+L  I  ILG+P         NE+    + SLP +K   P W      
Sbjct: 200 QKPLFPGDSEIDELFKIFRILGTP---------NEETWPGVTSLPDYKSAFPKWPPKDLA 250

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
            + P  +P  +DLL KML  +P KRI    AL H Y +
Sbjct: 251 TVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288

Length = 294

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  121 bits (304), Expect = 2e-32
 Identities = 60/151 (39%), Positives = 78/151 (51%), Gaps = 8/151 (5%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I D GL R  + P        T  + T WYRAPE++L S  Y+  +DIWSVGCI AEM  
Sbjct: 152 IADLGLGRAFSIP----VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR 207

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +P+FPG   L QL HI  +LG+PT +    +   +        P           P+  
Sbjct: 208 KQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRD---WHEFPQWKPQDLSRAVPDLS 264

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
           P  LDLL KML ++P KRI  + AL HPY +
Sbjct: 265 PEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  120 bits (302), Expect = 4e-32
 Identities = 59/157 (37%), Positives = 77/157 (49%), Gaps = 26/157 (16%)

Query: 34  DFGLAR-----VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           DFGLAR     V     +        V T WYR P+++  +K Y+ SID+WS GCI AE+
Sbjct: 142 DFGLARAFGIPVRCYSAE--------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 193

Query: 89  ISN--RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP----W 142
            +N  RP+FPG    DQL  I  +LG+PT E    +      S L      P  P     
Sbjct: 194 -ANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV------SKLPDYKPYPMYPATTSL 246

Query: 143 EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
             + P  +    DLL  +L  NP +RI  E+AL HPY
Sbjct: 247 VNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  119 bits (300), Expect = 9e-32
 Identities = 61/148 (41%), Positives = 79/148 (53%), Gaps = 7/148 (4%)

Query: 34  DFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
           DFGLAR    P   +T      V T WYRAPE++L S  Y+  +DIWS+G I AEM + +
Sbjct: 144 DFGLARAFGIPVRVYT----HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN 152
           P+F G   +DQL  I  ILG+PT +    +       Y  + P   K        N D +
Sbjct: 200 PLFHGDSEIDQLFRIFRILGTPTEDVWPGV--TSLPDYKNTFPKWKKGSLRSAVKNLDED 257

Query: 153 ALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            LDLL KML ++P KRI  + AL HPY 
Sbjct: 258 GLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  119 bits (299), Expect = 1e-31
 Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG AR+     D     T+YVATRWYRAPE+++    Y   +D+W++GC+ AE+++ 
Sbjct: 141 LCDFGFARILTGPGDD---YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P++PGK  +DQL  I   LG   P         +    L     + + P E  +PN   
Sbjct: 198 QPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISS 257

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPY 179
            AL  L   L  +P +R+  E+ L HPY
Sbjct: 258 PALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score =  118 bits (298), Expect = 2e-31
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 11/152 (7%)

Query: 34  DFGLARVAD-PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
           DFGLAR    P   ++      V T WYR P+++L S  Y+ S+D+W VGCI  EM + R
Sbjct: 146 DFGLARAKSVPSKTYS----NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201

Query: 93  PIFPG-KHYLDQLNHILGILGSPTPEDLSCII-NEKARSYLQSLPFKPKVPWEILYPNAD 150
           P+FPG     DQL+ I  +LG+PT E    +  N + + Y  S PF P  P     P  D
Sbjct: 202 PLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY--SFPFYPPRPLINHAPRLD 259

Query: 151 --PNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
             P+  +L  K L + P KRI   +A+ HPY 
Sbjct: 260 RIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  117 bits (295), Expect = 4e-31
 Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 7/150 (4%)

Query: 32  ICDFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           +CDFG AR +A P   +T    +YVATRWYRAPE+++    Y +++DIW+VGC++ EM++
Sbjct: 141 LCDFGFARTLAAPGEVYT----DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLT 196

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF-KPKVPWEILYPNA 149
             P+FPG   +DQL HI+  LG+  P     I  +        LP  K   P E  +P  
Sbjct: 197 GEPLFPGDSDIDQLYHIIKCLGNLIPR-HQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKL 255

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
               LDL  + L  +P  R      L H +
Sbjct: 256 SGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  112 bits (281), Expect = 4e-29
 Identities = 60/151 (39%), Positives = 80/151 (52%), Gaps = 13/151 (8%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+    +     LT  V T WYRAPE++L S  Y   +D+WSVGCI AEM   
Sbjct: 149 LADFGLARI----YSCQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRR 203

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI--LYPNA 149
           +P+F G    DQL  I  ++G P  +D    +       L    F P+ P  +  + P  
Sbjct: 204 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT------LPRGAFSPRGPRPVQSVVPEI 257

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
           + +   LL +MLTFNPHKRI    AL HP+ 
Sbjct: 258 EESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  109 bits (275), Expect = 5e-28
 Identities = 59/157 (37%), Positives = 77/157 (49%), Gaps = 19/157 (12%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+ + E       T  V T WYR PE++L  + Y  +ID+WS GCIL E+ + 
Sbjct: 157 LADFGLARLYNSEESRP--YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK 214

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP----FKPKVPWEIL-- 145
           +PIF     L QL  I  + GSP P     +I          LP     KPK  +     
Sbjct: 215 KPIFQANQELAQLELISRLCGSPCPAVWPDVIK---------LPYFNTMKPKKQYRRRLR 265

Query: 146 --YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
             +      ALDLL  MLT +P KR   E+AL  P+L
Sbjct: 266 EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  110 bits (276), Expect = 7e-28
 Identities = 49/62 (79%), Positives = 51/62 (82%), Gaps = 1/62 (1%)

Query: 238 GKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMEL-DDLPKETLKRLIFE 296
            KML FNPHKRI VE ALAHPYLEQY+DP+DEPVAEEPF F  EL DDLPKE LK LIFE
Sbjct: 273 DKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEPFPFDFELFDDLPKEKLKELIFE 332

Query: 297 ET 298
           E 
Sbjct: 333 EI 334

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score =  108 bits (271), Expect = 1e-27
 Identities = 61/152 (40%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR        T   +  V T WYR P+I+L S  Y+  ID+W VGCI  EM + 
Sbjct: 145 LADFGLARAKSIP---TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTG 201

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCII-NEKARSYLQSLPFKPKVPWEILYPNAD 150
           RP+FPG    +QL+ I  ILG+PT E    I+ NE+ +SY  + P           P  D
Sbjct: 202 RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSY--NYPKYRADCLHNHAPRLD 259

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
            +  +LL K+L F   KRI  E+A+ HPY   
Sbjct: 260 SDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  107 bits (269), Expect = 4e-27
 Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 4/151 (2%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR  +  ++      T  V T WYR PE++L  + Y   ID+W  GCI+AEM +
Sbjct: 160 LADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWT 219

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP--FKPKVPWEILYPN 148
             PI  G     QL  I  + GS TPE    +   +    ++ LP   K KV   +    
Sbjct: 220 RSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKME-LPQGQKRKVKERLKPYV 278

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
            DP+ALDL+ K+L  +P KRI  + AL H +
Sbjct: 279 KDPHALDLIDKLLVLDPAKRIDADTALNHDF 309

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  106 bits (266), Expect = 6e-27
 Identities = 65/150 (43%), Positives = 80/150 (53%), Gaps = 13/150 (8%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+    +     LT  V T WYRAPE++L S  Y   +D+WSVGCI AEM   
Sbjct: 151 LADFGLARI----YSFQMALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRR 205

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKA--RSYLQSLPFKPKVPWEILYPNA 149
           +P+F G   +DQL  IL ++G P  ED      + A  R    S   K   P E    + 
Sbjct: 206 KPLFRGSSDVDQLGKILDVIGLPGEEDWP---RDVALPRQAFHS---KSAQPIEKFVTDI 259

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
           D    DLL K LTFNP KRI    AL+HPY
Sbjct: 260 DELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score =  101 bits (253), Expect = 3e-25
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 6/150 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR        T   +  V T WYR P+++L S  Y+  ID+W VGCIL EM + 
Sbjct: 144 LADFGLARAKSVP---TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATG 200

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCII-NEKARSYLQSLPFKPKVPWEILYPNAD 150
           RP+FPG    ++L+ I  +LG+PT E    I  NE+ RSYL   P     P     P  D
Sbjct: 201 RPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYL--FPQYRAQPLINHAPRLD 258

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            + +DLL  +L +    RI  E AL H Y 
Sbjct: 259 TDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score =  102 bits (254), Expect = 2e-24
 Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 8/156 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG A+              Y+ +R+YRAPE+ML +  YT  ID+WS+GCI+AEMI  
Sbjct: 212 LCDFGSAKNLLAGQRSV----SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            PIF G+  +DQL  I+ +LG+PT + L  +    A      +  KPK   + ++P   P
Sbjct: 268 YPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDV--KPK-DLKKVFPKGTP 324

Query: 152 -NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
            +A++ + + L + P KR+   +ALA P+ +   DP
Sbjct: 325 DDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360

Length = 440

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 99.7 bits (248), Expect = 3e-24
 Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 8/152 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR        T   +  V T WYR P+++L S  Y+  ID+W VGCI  EM S 
Sbjct: 145 LADFGLARAKSVP---TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASG 201

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCI-INEKARSYLQSLP-FKPKVPWEILYPNA 149
           RP+FPG    D+L+ I  +LG+PT E    I  N++ ++Y  + P +KP+ P     P  
Sbjct: 202 RPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY--NFPKYKPQ-PLINHAPRL 258

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
           D   ++LL K L +   KRI  E+A+ H Y  
Sbjct: 259 DTEGIELLTKFLQYESKKRISAEEAMKHAYFR 290

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 95.8 bits (238), Expect = 5e-23
 Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 11/154 (7%)

Query: 32  ICDFGLARVAD-PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P   ++      V T WYR P+++L +  Y+ ++DIW  GCI  EM+ 
Sbjct: 144 LADFGLARAKSIPSQTYSS----EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQ 199

Query: 91  NRPIFPG-KHYLDQLNHILGILGSPTPE---DLSCIINEKARSYLQSLPFKPKVPWEILY 146
            +P FPG     +QL  I  +LG PT +    +S + N K   +L   P + +V W+ L 
Sbjct: 200 GQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRL- 258

Query: 147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            +  P A DL  +ML   P  RI  +DAL HPY 
Sbjct: 259 -SRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 94.7 bits (235), Expect = 1e-22
 Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 4/148 (2%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG AR      +     TEYVATRWYR+PE++L +  Y K++D+WSVGCIL E+   
Sbjct: 141 LCDFGFARNLSEGSNAN--YTEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDG 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-D 150
           +P+FPG+  +DQL  I  +LG    E +    +      L+          E  Y     
Sbjct: 198 QPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILS 257

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHP 178
              LDL+  +L  NP  R   E  L HP
Sbjct: 258 GVLLDLMKNLLKLNPTDRYLTEQCLNHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 88.4 bits (220), Expect = 4e-20
 Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRF-SMELDDLPKETLKRLIFEE 297
           KML+F+P KRI  + ALAHPYL Q +DP DEPVA+ PF F   + D+L +E LK LI+EE
Sbjct: 271 KMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPPFDFDFFDDDELTEEELKELIYEE 330

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 88.2 bits (218), Expect = 4e-20
 Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 20/167 (11%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D G AR+ +        L   V T WYRAPE++L ++ YTK+IDIW++GCI AE++++
Sbjct: 153 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 212

Query: 92  RPIF---------PGKHYLDQLNHILGILGSPTPEDL---------SCIINEKARSYLQS 133
            PIF            ++ DQL+ I  ++G P  +D          S ++ +  R+   +
Sbjct: 213 EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN 272

Query: 134 LPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
                 +    + P  D  A  LL K+LT +P KRI  E A+  PY 
Sbjct: 273 CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 86.3 bits (213), Expect = 2e-19
 Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 38/176 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D G AR+ +        L   V T WYRAPE++L ++ YTK+IDIW++GCI AE++++
Sbjct: 153 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 212

Query: 92  RPIFPGKH---------YLDQLNHILGILGSPTPEDLSCI------------------IN 124
            PIF  +          + DQL+ I  ++G P  +D   I                   N
Sbjct: 213 EPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN 272

Query: 125 EKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
                Y++    KP           D     LL K+LT +P KRI  E AL  PY 
Sbjct: 273 SSLIKYMEKHKVKP-----------DSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 84.7 bits (209), Expect = 7e-19
 Identities = 61/170 (35%), Positives = 80/170 (47%), Gaps = 31/170 (18%)

Query: 26  DPADEPICDFGLARVAD-PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           D  +  + DFGLAR    P H ++      V T WYR P+++L S  Y+  +D+W VGCI
Sbjct: 138 DTGELKLADFGLARAKSVPSHTYS----NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCI 193

Query: 85  LAEMISNRPIFPG-KHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP-FKP---- 138
             EMI     FPG K   DQL  I  +LG+P         NE     + SLP FKP    
Sbjct: 194 FVEMIQGVAAFPGMKDIQDQLERIFLVLGTP---------NEDTWPGVHSLPHFKPERFT 244

Query: 139 -------KVPWEIL-YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
                  +  W  L Y N   +A DL  K+L   P  R+  + AL+H Y 
Sbjct: 245 LYSPKNLRQAWNKLSYVN---HAEDLASKLLQCFPKNRLSAQAALSHEYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 85.2 bits (209), Expect = 1e-18
 Identities = 39/166 (23%), Positives = 57/166 (34%), Gaps = 23/166 (13%)

Query: 32  ICDFGLARVADPEHDHTG---FLTEYVATRWYRAPEIMLNSKG--YTKSIDIWSVGCILA 86
           + DFGLA++       +      +  V T  Y APE++L       + S DIWS+G  L 
Sbjct: 143 LIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLY 202

Query: 87  EMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY 146
           E+++  P F G+              S        II E         P           
Sbjct: 203 ELLTGLPPFEGEK------------NSSATSQTLKIILE------LPTPSLASPLSPSNP 244

Query: 147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
                 A DLL K+L  +P  R+     L+H  L        +   
Sbjct: 245 ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSD 290

Length = 384

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+F+P KRI VE ALAHPYL   +DP+DEPV + PF F  E D L +E +K LI+ E 
Sbjct: 273 KMLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQTPFSFDFEEDALTEEDIKELIYNEM 332

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 74.9 bits (184), Expect = 2e-15
 Identities = 33/59 (55%), Positives = 41/59 (69%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEE 297
           KML+F+P KRI    ALAHPYL  Y+DP DEPVAEE F +S    DLP +T K +++ E
Sbjct: 270 KMLVFDPQKRISAAEALAHPYLAPYHDPTDEPVAEEKFDWSFNDADLPVDTWKVMMYSE 328

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 72.9 bits (180), Expect = 4e-15
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 42/153 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA+    E   T     +  T  Y APE+ L  KGY K++D WS+G +L EM++ 
Sbjct: 134 LTDFGLAKELSSEGSRT---NTFCGTPEYLAPEV-LLGKGYGKAVDWWSLGVLLYEMLTG 189

Query: 92  RPIFPGK--HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           +P F  +    + +                  I+ +        L F   +         
Sbjct: 190 KPPFYAEDRKEIYEK-----------------ILKDP-------LRFPEFL--------- 216

Query: 150 DPNALDLLGKMLTFNPHKRIG---VEDALAHPY 179
            P A DL+  +L  +P KR+G    E+  AHP+
Sbjct: 217 SPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 72.6 bits (179), Expect = 7e-15
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 34/151 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG A+      +          T ++ APE++   + Y ++ DIWS+GC + EM + 
Sbjct: 142 LADFGCAKRLGDI-ETGEGTGSVRGTPYWMAPEVI-RGEEYGRAADIWSLGCTVIEMATG 199

Query: 92  RPIFPGKHYLDQ-LNHILGILGSPT-PEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           +P +         L  I      P  PE LS                             
Sbjct: 200 KPPWSELGNPMAALYKIGSSGEPPEIPEHLS----------------------------- 230

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
              A D L K L  +P KR   ++ L HP+L
Sbjct: 231 -EEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 73.2 bits (180), Expect = 9e-15
 Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEE 297
           K+L F+P KRI VE AL HPYL  ++DP DEPV ++PF FS E +D  +E L+ +I EE
Sbjct: 274 KLLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQKPFDFSFESEDSMEE-LRDMIIEE 331

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 70.8 bits (174), Expect = 7e-14
 Identities = 30/60 (50%), Positives = 38/60 (63%)

Query: 238 GKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEE 297
            +ML F+P +RI VE AL HP+L QY+DP DEP    PF F  E  +L +E LK  I +E
Sbjct: 275 SQMLQFDPEERITVEQALQHPFLAQYHDPDDEPTCPPPFDFDFEAIELSREQLKEAIVKE 334

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 69.2 bits (170), Expect = 7e-14
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + DFGL++           L   V T  Y APE++L    Y++  DIWS+G IL E+
Sbjct: 134 LADFGLSK---LLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 26/34 (76%), Positives = 30/34 (88%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML FNPHKRI VE ALAHPYLEQY+DP+DEP+ +
Sbjct: 275 MLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAE 308

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+ +P KRI    ALAHPYL +Y+DP DEPVA  P+  S E  DL  +  K L+++E 
Sbjct: 280 KMLVLDPDKRITAAEALAHPYLAEYHDPEDEPVA-PPYDQSFESRDLTVDEWKELVYKEI 338

Query: 299 RVFKQ 303
             FK 
Sbjct: 339 MNFKP 343

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 67.7 bits (166), Expect = 4e-13
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 34/147 (23%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           DFGLA++       + F   YV T +Y +PE + +     KS DIWS+GC++ E+ +  P
Sbjct: 153 DFGLAKIL---GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKS-DIWSLGCLIYELCALSP 208

Query: 94  IFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA 153
            F  ++ L QL                        S ++   F  ++P      +++ N 
Sbjct: 209 PFTARNQL-QLA-----------------------SKIKEGKF-RRIP---YRYSSELNE 240

Query: 154 LDLLGKMLTFNPHKRIGVEDALAHPYL 180
             ++  ML  +P KR   E+ L  P +
Sbjct: 241 --VIKSMLNVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 64.6 bits (158), Expect = 5e-12
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 48/161 (29%)

Query: 34  DFGLARV----------ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 83
           DFGL++V           D + D     T       Y APE++L  +G++K++D WS+GC
Sbjct: 136 DFGLSKVGLVRRQINLNDDEKEDKRIVGTPD-----YIAPEVILG-QGHSKTVDWWSLGC 189

Query: 84  ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE 143
           IL E +   P F G+                TPE     I +   +         K+ W 
Sbjct: 190 ILYEFLVGIPPFHGE----------------TPE----EIFQNILNG--------KIEW- 220

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIG---VEDALAHPYLE 181
                    A+DL+ K+L  +P KR+G   +E+   HP+ +
Sbjct: 221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 63.7 bits (156), Expect = 1e-11
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT 48
           ML+F+P KRI  + ALAHPYL Q +DP DEP+           + + T
Sbjct: 272 MLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPPFDFDFFDDDELT 319

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 37/152 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DF +A    P+       T    T  Y APE +L  +GY+ ++D WS+G    E +  
Sbjct: 141 ITDFNIATKVTPDT----LTTSTSGTPGYMAPE-VLCRQGYSVAVDWWSLGVTAYECLRG 195

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +  + G                        I ++       +         ++LYP    
Sbjct: 196 KRPYRGH--------------------SRTIRDQIRAKQETA---------DVLYPATWS 226

Query: 152 -NALDLLGKMLTFNPHKRIG--VEDALAHPYL 180
             A+D + K+L  +P KR+G  ++D   HPY 
Sbjct: 227 TEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 61.0 bits (149), Expect = 7e-11
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 34/149 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG+++V              V T +Y +PE+   +K Y    DIWS+GC+L E+ + 
Sbjct: 144 LGDFGISKVLS---STVDLAKTVVGTPYYLSPEL-CQNKPYNYKSDIWSLGCVLYELCTL 199

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +  F G++ L+    IL   G   P      I  +  S L+                   
Sbjct: 200 KHPFEGENLLELALKILK--GQYPP------IPSQYSSELR------------------- 232

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
              +L+  +L  +P +R  +   L  P++
Sbjct: 233 ---NLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 61.7 bits (150), Expect = 8e-11
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDD-LPKETLKRLIFEE 297
           ++L FNP  R+  E AL HPY+  Y  P DEPV+  PF    ELDD L    +  +I+  
Sbjct: 282 QILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVSLHPFHIEDELDDILLMTEIHSIIYNW 341

Query: 298 T 298
            
Sbjct: 342 D 342

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+ +  KRI    ALAH Y  QY+DP DEPVA +P+  S E  DL  +  K L ++E 
Sbjct: 282 KMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEV 340

Query: 299 RVF 301
             F
Sbjct: 341 ISF 343

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 58.9 bits (142), Expect = 6e-10
 Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 238 GKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEE 297
            KML+ +  KRI    ALAHPY  QY+DP DEP A EP+  S E  +   E  K L +EE
Sbjct: 279 EKMLVLDSDKRISASEALAHPYFSQYHDPEDEPEA-EPYDESPENKERTIEEWKELTYEE 337

Query: 298 TRVFK 302
              FK
Sbjct: 338 VSSFK 342

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 58.0 bits (141), Expect = 7e-10
 Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 35/149 (23%)

Query: 32  ICDFGLA-RVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGL+ +++D     T      V T ++ APE ++N K Y    DIWS+G    E+  
Sbjct: 139 LIDFGLSAQLSD-----TKARNTMVGTPYWMAPE-VINGKPYDYKADIWSLGITAIELAE 192

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +P +     L  +  +  I  +  P   +            S  FK             
Sbjct: 193 GKPPY---SELPPMKALFKIATNGPPGLRN--------PEKWSDEFK------------- 228

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPY 179
               D L K L  NP KR   E  L HP+
Sbjct: 229 ----DFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 2/46 (4%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDD 284
           K+L+FNP+KR+  E AL HPY+ Q+++P+DEPV   P    + LDD
Sbjct: 277 KLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVLPYPIT--IPLDD 320

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 58.8 bits (142), Expect = 9e-10
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 34/190 (17%)

Query: 26  DPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 85
           DP    ICD G     D  H  T      V+TR YR+PE++L   G+  S D+WS+GCI+
Sbjct: 283 DPCRVRICDLG--GCCDERHSRTAI----VSTRHYRSPEVVL-GLGWMYSTDMWSMGCII 335

Query: 86  AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
            E+ + + ++     L+ L+ +   LG    E       E+AR    S           L
Sbjct: 336 YELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSA--------GQL 387

Query: 146 YPNADPNAL-------------------DLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
            P  DP  L                   DL+  +L ++  KR+       HPY+ +YY  
Sbjct: 388 RPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPE 447

Query: 187 ADEPVSWREN 196
             +  ++ +N
Sbjct: 448 CRQHPNYPDN 457

Length = 467

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 20/34 (58%), Positives = 25/34 (73%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           +L F+P KRI VE AL HPYL  ++DP DEP+C 
Sbjct: 275 LLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQ 308

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 58.0 bits (140), Expect = 1e-09
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+ +   RI    ALAHPY E+++DP DE  A  P+  S +  D   E  KRL F E 
Sbjct: 280 KMLVLDAESRITAAEALAHPYFEEFHDPEDETEA-PPYDDSFDEVDQSLEEWKRLTFTEI 338

Query: 299 RVFK 302
             F+
Sbjct: 339 LSFQ 342

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 55/170 (32%)

Query: 32  ICDFGLARVADPEHDHTGFLTE-----------------YVATRWYRAPEIMLNSKGYTK 74
           I DFG A+V DP         +                 +V T  Y +PE +LN K   K
Sbjct: 143 ITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPE-LLNEKPAGK 201

Query: 75  SIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSL 134
           S D+W++GCI+ +M++ +P F G                          NE        L
Sbjct: 202 SSDLWALGCIIYQMLTGKPPFRGS-------------------------NEY-------L 229

Query: 135 PFKPKVPWEILYP-NADPNALDLLGKMLTFNPHKRIGVEDAL----AHPY 179
            F+  +  E  +P N  P+A DL+ K+L  +P  R+GV +      AHP+
Sbjct: 230 TFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA+   PE      LT  V T  Y  PEI + ++ Y +  D+W+ GCIL +M + 
Sbjct: 155 ITDFGLAKQKQPE----SKLTSVVGTILYSCPEI-VKNEPYGEKADVWAFGCILYQMCTL 209

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDL 119
           +P F   + L     I+  +  P PE +
Sbjct: 210 QPPFYSTNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 58.0 bits (140), Expect = 1e-09
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 48/172 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFGL ++   + D T     +  T  Y APE++L   GYTK++D W++G +L EM++ 
Sbjct: 134 LCDFGLCKLNMKDDDKT---NTFCGTPEYLAPELLL-GHGYTKAVDWWTLGVLLYEMLTG 189

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP-NAD 150
            P F  ++                       +NE  R  LQ           + +P   D
Sbjct: 190 LPPFYDEN-----------------------VNEMYRKILQE---------PLRFPDGFD 217

Query: 151 PNALDLLGKMLTFNPHKRIGV---EDALAHPYLEQYYDPADEPVSWRENWGK 199
            +A DLL  +L+ +P +R+G    ++   HP+  Q        +SW++   K
Sbjct: 218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ--------LSWKKLLMK 261

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 22/34 (64%), Positives = 27/34 (79%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+F+P KRI VE ALAHPYL   +DP+DEP+C 
Sbjct: 274 MLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQ 307

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 41/151 (27%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           DFG+A+          F   +  + ++ APE++    GY  + DIWS+GC + EM + +P
Sbjct: 145 DFGMAKQVVEF----SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKP 200

Query: 94  IFPGKHYLDQLNHILGILGSPT----PEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
            +     L+ +  +  I  S      P+ LS                             
Sbjct: 201 PW---SQLEGVAAVFKIGRSKELPPIPDHLS----------------------------- 228

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
              A D + K L  +P  R    + L HP++
Sbjct: 229 -DEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 55.2 bits (133), Expect = 8e-09
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 27/149 (18%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPE-IMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFG+++ +D  +D+   ++   +  W  APE I   S+GY+  +DIWS+GC++ EM  
Sbjct: 149 ISDFGISKKSDDIYDNDQNMSMQGSVFWM-APEVIHSYSQGYSAKVDIWSLGCVVLEM-- 205

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               F G+        I  +           + N+++          P +P ++   N  
Sbjct: 206 ----FAGRRPWSDEEAIAAMFK---------LGNKRSA---------PPIPPDVS-MNLS 242

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPY 179
           P ALD L    T NP  R    + L HP+
Sbjct: 243 PVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPIC 33
           ML F+P +RI VE AL HP+L QY+DP DEP C
Sbjct: 277 MLQFDPEERITVEQALQHPFLAQYHDPDDEPTC 309

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 17/34 (50%), Positives = 27/34 (79%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           +L+FNP+KR+  E AL HPY+ Q+++P+DEP+  
Sbjct: 278 LLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVLP 311

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG ++           +     T ++ +PE+ ++ +GY +  D+WSVGC + EM++ 
Sbjct: 145 LGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEV-ISGEGYGRKADVWSVGCTVVEMLTE 203

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD- 150
           +P  P   + + +  I  I   PT   L   ++  AR++L+               NA  
Sbjct: 204 KP--PWAEF-EAMAAIFKIATQPTNPQLPSHVSPDARNFLRR----------TFVENAKK 250

Query: 151 -PNALDLL 157
            P+A +LL
Sbjct: 251 RPSAEELL 258

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 31/156 (19%)

Query: 25  YDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 84
            D  +    D  L R  D +       +  V T  Y APE+ L    Y    D WS+G I
Sbjct: 162 NDSHNLLFRDNVLVRRRDHKQRRVRANST-VGTPDYIAPEV-LRGTPYGLECDWWSLGVI 219

Query: 85  LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI 144
           L EM+   P F                     E  + IIN K     +SL F P  P   
Sbjct: 220 LYEMLYGFPPF---------------YSDTLQETYNKIINWK-----ESLRFPPDPPVS- 258

Query: 145 LYPNADPNALDLLGKMLTFNPHKRIG-VEDALAHPY 179
                 P A+DL+ ++L  +P  R+G  E+  +HP+
Sbjct: 259 ------PEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 48/154 (31%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           DFGL+R              +V T  Y APE  +   G  K  D WS+GC++ E +   P
Sbjct: 140 DFGLSRNGLENKK-------FVGTPDYLAPET-ILGVGDDKMSDWWSLGCVIFEFLFGYP 191

Query: 94  IFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN----- 148
            F  +                TP+ +                F   +   I +P      
Sbjct: 192 PFHAE----------------TPDAV----------------FDNILSRRINWPEEVKEF 219

Query: 149 ADPNALDLLGKMLTFNPHKRIG---VEDALAHPY 179
             P A+DL+ ++L  +P KR+G    ++  +HP+
Sbjct: 220 CSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPF 253

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 53.0 bits (127), Expect = 4e-08
 Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 36/150 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG++R+     D     T +  T +Y +PE  L  +GY    DIWS+GCIL EM   
Sbjct: 146 IGDFGVSRLLMGSCD---LATTFTGTPYYMSPE-ALKHQGYDSKSDIWSLGCILYEMCCL 201

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G+++L     +L I+  PTP                SL            P    
Sbjct: 202 AHAFEGQNFLSV---VLRIVEGPTP----------------SL------------PETYS 230

Query: 152 NALD-LLGKMLTFNPHKRIGVEDALAHPYL 180
             L+ ++  ML  +P  R    + L +P++
Sbjct: 231 RQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 53.0 bits (127), Expect = 5e-08
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           +CDFGL++    ++  T     +  T  Y APE++L+ KGYTK +D WS+G ++ EM
Sbjct: 137 LCDFGLSKANLTDNKTT---NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEM 190

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 52.3 bits (126), Expect = 6e-08
 Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 40/157 (25%)

Query: 32  ICDFGLARVADPEHDHTGFLTE-----YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 86
           +CDFG+          +G L       +V T  Y APE  +    Y+   DIWS+G  L 
Sbjct: 142 LCDFGV----------SGQLVNSLAKTFVGTSSYMAPE-RIQGNDYSVKSDIWSLGLSLI 190

Query: 87  EMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY 146
           E+ + R  FP     D  + I         E L  I+NE            P++P     
Sbjct: 191 ELATGR--FPYPPENDPPDGIF--------ELLQYIVNEPP----------PRLPSGKF- 229

Query: 147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
               P+  D +   L  +P +R   ++ L HP++++Y
Sbjct: 230 ---SPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 52.9 bits (127), Expect = 7e-08
 Identities = 20/34 (58%), Positives = 25/34 (73%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+F+P KRI    ALAHPYL  Y+DP DEP+ +
Sbjct: 271 MLVFDPQKRISAAEALAHPYLAPYHDPTDEPVAE 304

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPAD-EPVAEEPFRFSMELDDLPKETLKRLIFEE 297
           KML+ +P KRI V+ AL HPY+  +YDP++ E     P+  S++  +   E  K LI++E
Sbjct: 293 KMLVIDPEKRISVDDALQHPYINVWYDPSEVEAPPPAPYDHSIDEREHTVEEWKELIYKE 352

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 52.3 bits (126), Expect = 8e-08
 Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 38/154 (24%)

Query: 34  DFGLA-RVADPEHDHTGFLTEYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMIS 90
           DFG A ++ +        +     T  Y APE++   K  G+ ++ DIWS+GC++ EM +
Sbjct: 142 DFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT 201

Query: 91  NRPIFPGKHYLDQLNHILGILGS----PTPEDLSCIINEKARSYLQSLPFKPKVPWEILY 146
            +  +     LD    I+  +G+    P P+ L                           
Sbjct: 202 GKRPWSE---LDNEFQIMFHVGAGHKPPIPDSL--------------------------- 231

Query: 147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
               P   D L + L  +P KR    + L HP++
Sbjct: 232 -QLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 34/156 (21%), Positives = 49/156 (31%), Gaps = 36/156 (23%)

Query: 25  YDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 84
                  I D G+++V              + T  Y APE+    + Y+   DIWS+GC+
Sbjct: 137 VANDLVKIGDLGISKVLK-----KNMAKTQIGTPHYMAPEVW-KGRPYSYKSDIWSLGCL 190

Query: 85  LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI 144
           L EM +  P F  +   D    +      P P   S  +    RS               
Sbjct: 191 LYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRS--------------- 235

Query: 145 LYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
                          ML   P  R   +  LA P +
Sbjct: 236 ---------------MLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 19/34 (55%), Positives = 24/34 (70%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+ +P KRI    ALAHPYL +Y+DP DEP+  
Sbjct: 281 MLVLDPDKRITAAEALAHPYLAEYHDPEDEPVAP 314

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 51/189 (26%)

Query: 55  VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSP 114
           V T  Y APE++L  KGYT+  D WSVG IL EM+  +P F                 +P
Sbjct: 209 VGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFL----------------AP 251

Query: 115 TPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHK--RIGVE 172
           TP +       K  ++  +L   P+V          P A+DL+ K+      +  R G +
Sbjct: 252 TPTETQL----KVINWENTLHIPPQV-------KLSPEAVDLITKLCCSAEERLGRNGAD 300

Query: 173 DALAHPYLEQYYDPAD---EPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE 229
           D  AHP+  +    +D   +P  +                     ++HP     +DP +E
Sbjct: 301 DIKAHPFFSEVDFSSDIRTQPAPYVPK------------------ISHPMDTSNFDPVEE 342

Query: 230 PVSWRENWG 238
              W +  G
Sbjct: 343 ESPWNDASG 351

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 36/148 (24%)

Query: 34  DFGLA-RVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
           DFG+A ++ D   D        V T ++ APE++  S   T S DIWS+GC + E+++  
Sbjct: 142 DFGVATKLNDVSKDDASV----VGTPYWMAPEVIEMSGASTAS-DIWSLGCTVIELLTGN 196

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN 152
           P +   + L+ +  +  I+    P                 LP               P 
Sbjct: 197 PPY---YDLNPMAALFRIVQDDHP----------------PLP-----------EGISPE 226

Query: 153 ALDLLGKMLTFNPHKRIGVEDALAHPYL 180
             D L +    +P+ R   +  L HP++
Sbjct: 227 LKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 49.5 bits (119), Expect = 5e-07
 Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 41/155 (26%)

Query: 34  DFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
           DFG A+ +   +   T     +  T  Y APEI+LN KGY  S+D WS+G +L E+++ R
Sbjct: 136 DFGFAKKLKSGQKTWT-----FCGTPEYVAPEIILN-KGYDFSVDYWSLGILLYELLTGR 189

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN-ADP 151
           P F                     ++    I      Y   L    K    + +PN  D 
Sbjct: 190 PPFGE------------------DDEDPMEI------YNDILKGNGK----LEFPNYIDK 221

Query: 152 NALDLLGKMLTFNPHKRIG-----VEDALAHPYLE 181
            A DL+ ++L  NP +R+G     ++D   H +  
Sbjct: 222 AAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFN 256

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 49.8 bits (119), Expect = 5e-07
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 33/152 (21%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-SKGYTKSIDIWSVGCILAEMISNR 92
           DFGL++    E +   +   +  T  Y APE++   S G+ K++D WS+G +  E+++  
Sbjct: 148 DFGLSKEFLAEEEERAY--SFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA 205

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN 152
             F                   T +      +E +R  L+S P  P              
Sbjct: 206 SPF-------------------TVDGEQNSQSEISRRILKSKPPFP--------KTMSAE 238

Query: 153 ALDLLGKMLTFNPHKRIGVEDA---LAHPYLE 181
           A D + K+L  +P KR+G   A     HP+ +
Sbjct: 239 ARDFIQKLLEKDPKKRLGANGADEIKNHPFFQ 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 36/132 (27%)

Query: 55  VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSP 114
           V T  Y APE+ L   GY K  D WS+G I+ EM+   P F                 S 
Sbjct: 200 VGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPF----------------CSD 242

Query: 115 TPEDLSC--IINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRI--- 169
            P++ +   IIN K     ++L F  +VP         P A DL+ ++      +R+   
Sbjct: 243 NPQE-TYRKIINWK-----ETLQFPDEVP-------LSPEAKDLIKRLCC-EAERRLGNN 288

Query: 170 GVEDALAHPYLE 181
           GV +  +HP+ +
Sbjct: 289 GVNEIKSHPFFK 300

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 49.1 bits (117), Expect = 9e-07
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 32/150 (21%)

Query: 32  ICDFGLARVADPEHDHTG---FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           I DFG A  A      TG   F  + + T  + APE+ L  + Y +S D+WSVGC++ EM
Sbjct: 145 IADFGAA--ARLAAKGTGAGEFQGQLLGTIAFMAPEV-LRGEQYGRSCDVWSVGCVIIEM 201

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
            + +P +  + + + L  I  I  + T                      P +P  +    
Sbjct: 202 ATAKPPWNAEKHSNHLALIFKIASATTA---------------------PSIPEHL---- 236

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHP 178
             P   D+  + L   P  R    + L HP
Sbjct: 237 -SPGLRDVTLRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 38/150 (25%)

Query: 34  DFGLARVADPEHDHTGFLT---EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           DFGL+          G +T     V +  Y APE +L  KGY  ++D WS+GC+L E + 
Sbjct: 144 DFGLS---------KGIVTYANSVVGSPDYMAPE-VLRGKGYDFTVDYWSLGCMLYEFLC 193

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKA-RSYLQSLPFKPKVPWEILYPNA 149
             P F G                 TP +     N K  +  LQ    +P   ++    N 
Sbjct: 194 GFPPFSGS----------------TPNET--WENLKYWKETLQ----RPV--YDDPRFNL 229

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
              A DL+ K++     +   +ED   HP+
Sbjct: 230 SDEAWDLITKLINDPSRRFGSLEDIKNHPF 259

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 51/157 (32%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG A+        T  L     T  Y APEI+L SKGY K++D W++G ++ EM++ 
Sbjct: 142 ITDFGFAKRVK---GRTYTL---CGTPEYLAPEIIL-SKGYGKAVDWWALGILIYEMLAG 194

Query: 92  RPIF----PGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
            P F    P + Y      I           L   +               + P      
Sbjct: 195 YPPFFDDNPIQIY----EKI-----------LEGKV---------------RFP-----S 219

Query: 148 NADPNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
              P+A DL+  +L  +  KR+G     V D   HP+
Sbjct: 220 FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 22/132 (16%)

Query: 32  ICDFGLARVADPEHDHTGFLTE---YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           I DFG+++  +     T           + ++ APE++  +  YT+  DIWS+GC++ EM
Sbjct: 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTS-YTRKADIWSLGCLVVEM 205

Query: 89  ISNRPIFPGKHYLDQLNHI--LGILGSPT-PEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
           ++ +  FP      QL  I  +G   SP  P ++S     +A  +L+         +EI 
Sbjct: 206 LTGKHPFPD---CTQLQAIFKIGENASPEIPSNIS----SEAIDFLEKT-------FEID 251

Query: 146 YPNADPNALDLL 157
           + N  P A +LL
Sbjct: 252 H-NKRPTAAELL 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 42/152 (27%)

Query: 34  DFGLARVADPEHDHTGFLTE-YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
           DFGL +    E  H G +T  +  T  Y APEI++ S G+ K++D WS+G ++ +M++  
Sbjct: 143 DFGLCK----ESIHEGTVTHTFCGTIEYMAPEILMRS-GHGKAVDWWSLGALMYDMLTGA 197

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN 152
           P F  ++    ++ IL                 K +    +LP           P   P 
Sbjct: 198 PPFTAENRKKTIDKIL-----------------KGK---LNLP-----------PYLTPE 226

Query: 153 ALDLLGKMLTFNPHKRIG--VEDAL---AHPY 179
           A DLL K+L  NP  R+G    DA    +HP+
Sbjct: 227 ARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF 258

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG      PE       +  V T ++ APE+ +  K Y   +DIWS+G +  EMI  
Sbjct: 157 LTDFGFCAQITPEQSKR---STMVGTPYWMAPEV-VTRKAYGPKVDIWSLGIMAIEMIEG 212

Query: 92  RPIFPGKHYLDQLNHILGILGSP---TPEDLSCIINE 125
            P +  ++ L  L +++   G+P    PE LS I  +
Sbjct: 213 EPPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRD 248

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 12/107 (11%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL++ +    DH      +  T  Y APE+ +N +G+T+S D WS G ++ EM++ 
Sbjct: 139 LTDFGLSKESI---DHEKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTG 194

Query: 92  RPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFK 137
              F GK   + +  IL   LG P        ++ +A+S L++L FK
Sbjct: 195 SLPFQGKDRKETMTMILKAKLGMPQ------FLSPEAQSLLRAL-FK 234

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 47.6 bits (113), Expect = 4e-06
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML  +  KR+    AL HPY + + D  +E   ++P+  S+E + L  +  K+ I++E 
Sbjct: 279 KMLELDVDKRLTATEALEHPYFDSFRDADEET-EQQPYDDSLENEKLSVDEWKKHIYKEV 337

Query: 299 RVF 301
           + F
Sbjct: 338 KSF 340

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 47.3 bits (112), Expect = 4e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 234 RENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPK--ETLK 291
           R+   KML+ +P KRI V+ AL HPY+  +YDPA E  A  P  +  +L++     E  K
Sbjct: 292 RDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA-EAEAPPPQIYDAQLEEREHAIEEWK 350

Query: 292 RLIFEE 297
            LI++E
Sbjct: 351 ELIYKE 356

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 47.1 bits (112), Expect = 5e-06
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 34/129 (26%)

Query: 55  VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSP 114
           V T  Y APE++L + GYT+  D WSVG IL EM+  +P F                 + 
Sbjct: 205 VGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGQPPFL----------------AD 247

Query: 115 TP-EDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG--- 170
           TP E    +IN +      +L    +             A DL+ ++       R+G   
Sbjct: 248 TPAETQLKVINWE-----TTLHIPSQA-------KLSREASDLILRLCC-GAEDRLGKNG 294

Query: 171 VEDALAHPY 179
            ++  AHP+
Sbjct: 295 ADEIKAHPF 303

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 46.6 bits (110), Expect = 5e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 56  ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPT 115
            T ++ +PE+ ++ +GY +  D+WS+GC + EM++ +P  P   Y + +  I  I   PT
Sbjct: 171 GTPYWMSPEV-ISGEGYGRKADVWSLGCTVVEMLTEKP--PWAEY-EAMAAIFKIATQPT 226

Query: 116 PEDLSCIINEKARSYLQSL 134
              L   I+E AR +L  +
Sbjct: 227 NPQLPSHISEHARDFLGCI 245

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG++++   E+     +   V T +Y +PE +     Y    DIW++GC+L E+++ 
Sbjct: 142 LGDFGISKILGSEYSMAETV---VGTPYYMSPE-LCQGVKYNFKSDIWALGCVLYELLTL 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
           +  F   + L+ +  I+    +P     S  +     S LQ  P K     E+L
Sbjct: 198 KRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 46.4 bits (111), Expect = 6e-06
 Identities = 42/153 (27%), Positives = 57/153 (37%), Gaps = 36/153 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG A     E          V T ++ APE++   K Y   +DIWS+G +  EM   
Sbjct: 157 LADFGFAAQLTKEKSKR---NSVVGTPYWMAPEVIK-RKDYGPKVDIWSLGIMCIEMAEG 212

Query: 92  RPIFPGKHYLDQ--LNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
            P  P   YL +  L  +  I     P                  P K    W       
Sbjct: 213 EP--P---YLREPPLRALFLITTKGIP------------------PLKNPEKW------- 242

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
            P   D L K L  +P KR   E+ L HP+L++
Sbjct: 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 46.6 bits (110), Expect = 7e-06
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 234 RENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPK--ETLK 291
           R+   KML+ +P KRI V+ AL HPY+  +YDPA E  A  P  +  +LD+     E  K
Sbjct: 288 RDLLSKMLVIDPAKRISVDEALQHPYINVWYDPA-EVEAPPPQIYDKQLDEREHTIEEWK 346

Query: 292 RLIFEE 297
            LI++E
Sbjct: 347 ELIYKE 352

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 46.2 bits (109), Expect = 7e-06
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 9/95 (9%)

Query: 56  ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPT 115
            T ++ +PE+ ++ +GY +  DIWSVGC + EM++ +P  P   + + +  I  I   PT
Sbjct: 171 GTPYWMSPEV-ISGEGYGRKADIWSVGCTVVEMLTEKP--PWAEF-EAMAAIFKIATQPT 226

Query: 116 PEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
              L   +++  R +L+ +  + K     L P+AD
Sbjct: 227 NPVLPPHVSDHCRDFLKRIFVEAK-----LRPSAD 256

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 46.1 bits (109), Expect = 7e-06
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           DFG+AR  +   D        V T +Y +PEI  N + Y    DIWS+GC+L E+ + + 
Sbjct: 145 DFGIARQLN---DSMELAYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKH 200

Query: 94  IFPGKHY 100
            F G + 
Sbjct: 201 PFEGNNL 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 34  DFGLAR---VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           DFG AR          H+  L     T ++ APE+ +N  GY +  DIWS+GC + EM +
Sbjct: 145 DFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV-INESGYGRKSDIWSIGCTVFEMAT 203

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +P       +D+L  +  I                 R  +  LP            +  
Sbjct: 204 GKPPLAS---MDRLAAMFYI--------------GAHRGLMPRLP-----------DSFS 235

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
             A+D +   LT + H+R      L H +L
Sbjct: 236 AAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 34/147 (23%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           D G+ARV + + D    L   + T +Y +PE+  N K Y    D+W++GC + EM + + 
Sbjct: 145 DLGIARVLENQCDMASTL---IGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKH 200

Query: 94  IFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA 153
            F  K                   D++ ++    R     LP  PK        +  P  
Sbjct: 201 AFNAK-------------------DMNSLV---YRIIEGKLPPMPK--------DYSPEL 230

Query: 154 LDLLGKMLTFNPHKRIGVEDALAHPYL 180
            +L+  ML+  P KR  V+  L  PY+
Sbjct: 231 GELIATMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 52/165 (31%)

Query: 34  DFGLARVA-----------DPEHDHTGFLTEYV-ATRWYRAPEIMLNSKGYTKSIDIWSV 81
           DFGL+++              E D   FL + V  T  Y APE++L  +GY K +D W++
Sbjct: 144 DFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAM 202

Query: 82  GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP 141
           G IL E +     F G                 TPE+L                F   + 
Sbjct: 203 GIILYEFLVGCVPFFGD----------------TPEEL----------------FGQVIS 230

Query: 142 WEILYPNAD----PNALDLLGKMLTFNPHKRIGVEDAL---AHPY 179
            +I +P  D     +A DL+ ++L  NP +R+G   A     H +
Sbjct: 231 DDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF 275

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 39/154 (25%), Positives = 58/154 (37%), Gaps = 42/154 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG+ +        T   + +  T  Y APEI+     Y  ++D W++G +L EM++ 
Sbjct: 137 IADFGMCKEGILGGVTT---STFCGTPDYIAPEILSYQP-YGPAVDWWALGVLLYEMLAG 192

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-D 150
           +  F G    +    IL        ED                        E+ YP    
Sbjct: 193 QSPFEGDDEDELFQSIL--------ED------------------------EVRYPRWLS 220

Query: 151 PNALDLLGKMLTFNPHKRIGV-----EDALAHPY 179
             A  +L   LT NP KR+G      +D   HP+
Sbjct: 221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPF 254

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 32/163 (19%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG++               YV T  Y APE +   + Y    D+WS+G    E+   
Sbjct: 136 LCDFGVST-----QLVNSIAKTYVGTNAYMAPERISGEQ-YGIHSDVWSLGISFMELALG 189

Query: 92  RPIFPGKHYLD-QLNHILGILGSPTP-EDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           R  FP   Y   Q N      GS  P + L CI++E            P +P        
Sbjct: 190 R--FP---YPQIQKNQ-----GSLMPLQLLQCIVDEDP----------PVLPVGQF---- 225

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
               +  + + +   P +R   E+ + HP++ QY D   E VS
Sbjct: 226 SEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNAEVVS 268

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 33/155 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFG+++V +     T      +V T  Y +PE  +  + Y+ + DIWS+G  L E   
Sbjct: 141 IADFGISKVLEN----TLDQCNTFVGTVTYMSPE-RIQGESYSYAADIWSLGLTLLECAL 195

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +  FP   +L          G P+  +L   I +            P +P E       
Sbjct: 196 GK--FP---FLPP--------GQPSFFELMQAICDGP---------PPSLPAEE----FS 229

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYD 185
           P   D +   L  +P KR    + L HP++ +  D
Sbjct: 230 PEFRDFISACLQKDPKKRPSAAELLQHPFI-KKAD 263

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 16/33 (48%), Positives = 20/33 (60%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPIC 33
           +L FNP  R+  E AL HPY+  Y  P DEP+ 
Sbjct: 283 ILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVS 315

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 34/155 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL++    E     +   +  T  Y APEI+    G+ K++D WS+G ++ E+   
Sbjct: 146 LTDFGLSKEFLSEEKERTY--SFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFEL--- 200

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
                              L   +P  L    N ++    + L   P  P         P
Sbjct: 201 -------------------LTGASPFTLEGERNTQSEVSRRILKCDPPFP-----SFIGP 236

Query: 152 NALDLLGKMLTFNPHKRI-----GVEDALAHPYLE 181
            A DLL K+L  +P KR+     G  +   HP+ +
Sbjct: 237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 52/175 (29%), Positives = 69/175 (39%), Gaps = 55/175 (31%)

Query: 32  ICDFGLA-RVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFG A +V D      G       T  Y APE+ + SKG+ K++D W++G +L E I+
Sbjct: 159 VTDFGFAKKVPDRTFTLCG-------TPEYLAPEV-IQSKGHGKAVDWWTMGVLLYEFIA 210

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP-WEILYPNA 149
             P F      D            TP           R Y + L  + K P W       
Sbjct: 211 GYPPF-----FDD-----------TP----------FRIYEKILAGRLKFPNW------F 238

Query: 150 DPNALDLLGKMLTFNPHKRI-----GVEDALAHPY--------LEQYYDPADEPV 191
           D  A DL+  +L  +  KR+     GV D   HPY        L   Y PA  PV
Sbjct: 239 DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPV 293

Length = 329

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 45.1 bits (106), Expect = 2e-05
 Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 38/153 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG      PE      +   V T ++ APE+ +  K Y   +DIWS+G +  EM+  
Sbjct: 156 LTDFGFCAQITPEQSKRSTM---VGTPYWMAPEV-VTRKAYGPKVDIWSLGIMAIEMVEG 211

Query: 92  RPIFPGKHYLDQLNHILGILGSP---TPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
            P +  ++ L  L +++   G+P    PE LS I                          
Sbjct: 212 EPPYLNENPLRAL-YLIATNGTPELQNPEKLSPIFR------------------------ 246

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
                 D L + L  +  KR   ++ L HP+L+
Sbjct: 247 ------DFLNRCLEMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 42/154 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL +      D T     +  T  + APE++  +  YT+++D W +G ++ EM+  
Sbjct: 142 IADFGLCKEGMGFGDRTS---TFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIYEMLVG 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              FPG    D+             E    I+N+                 E+ YP    
Sbjct: 198 ESPFPGD---DE------------EEVFDSIVND-----------------EVRYPRFLS 225

Query: 152 N-ALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
             A+ ++ ++L  NP +R+G      ED    P+
Sbjct: 226 REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPF 259

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+R    + D+       +  RW  APE +   K  +KS D+WS G +L E+ + 
Sbjct: 144 ISDFGLSRDLY-DDDYYKVKGGKLPIRWM-APESLKEGKFTSKS-DVWSFGVLLWEIFTL 200

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 36/149 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG+ +      +  G  + +  T  Y APEI+   K Y +S+D WS G +L EM+  
Sbjct: 137 IADFGMCKE---NMNGEGKASTFCGTPDYIAPEILKGQK-YNESVDWWSFGVLLYEMLIG 192

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +  F G+   D+L                 I+N++        P  P+  W         
Sbjct: 193 QSPFHGEDE-DELFD--------------SILNDR--------PHFPR--W------ISK 221

Query: 152 NALDLLGKMLTFNPHKRIGVE-DALAHPY 179
            A D L K+   +P KR+GV+ D   HP+
Sbjct: 222 EAKDCLSKLFERDPTKRLGVDGDIRQHPF 250

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+R    + D+       +  RW  APE +   K  +KS D+WS G +L E+ + 
Sbjct: 143 ISDFGLSRDLY-DDDYYRKRGGKLPIRWM-APESLKEGKFTSKS-DVWSFGVLLWEIFTL 199

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 44.3 bits (104), Expect = 4e-05
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+ +  KRI    ALAH Y  QY+DP DEP+ D
Sbjct: 283 MLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 316

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 39/151 (25%), Positives = 53/151 (35%), Gaps = 35/151 (23%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-----DIWSVGCILAEM 88
           DFG A  A    +        V T  Y APE++    G  K       D WS+G I  EM
Sbjct: 145 DFGSA--ARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEM 202

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           I  R                    SP  E  S        ++ + L F    P +   P 
Sbjct: 203 IYGR--------------------SPFHEGTSAKTYNNIMNFQRFLKF----PED---PK 235

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
              + LDL+  +L     +R+G E    HP+
Sbjct: 236 VSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 44.3 bits (104), Expect = 4e-05
 Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 38/153 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG      PE      +   V T ++ APE+ +  K Y   +DIWS+G +  EM+  
Sbjct: 156 LTDFGFCAQITPEQSKRSTM---VGTPYWMAPEV-VTRKAYGPKVDIWSLGIMAIEMVEG 211

Query: 92  RPIFPGKHYLDQLNHILGILGSP---TPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
            P +  ++ L  L +++   G+P    PE LS +                          
Sbjct: 212 EPPYLNENPLRAL-YLIATNGTPELQNPERLSAVFR------------------------ 246

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
                 D L + L  +  +R   ++ L HP+L+
Sbjct: 247 ------DFLNRCLEMDVDRRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 44.2 bits (104), Expect = 4e-05
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 29/132 (21%)

Query: 55  VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSP 114
           V T ++ APE++  +  Y   +DIWS+G ++ EM+   P +     +  +     +  SP
Sbjct: 178 VGTPYWMAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR---LRDSP 233

Query: 115 TPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDA 174
            P         K ++  +                  P   D L +MLT  P +R   ++ 
Sbjct: 234 PP---------KLKNAHKI----------------SPVLRDFLERMLTREPQERATAQEL 268

Query: 175 LAHPYLEQYYDP 186
           L HP+L Q   P
Sbjct: 269 LDHPFLLQTGLP 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 29/151 (19%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG++         T     +  T +Y APE  +  K Y+ + D+WS+G  L E+  N
Sbjct: 146 LCDFGVSGELVNSLAGT-----FTGTSFYMAPE-RIQGKPYSITSDVWSLGLTLLEVAQN 199

Query: 92  RPIFP--GKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           R  FP  G+  L  +  +  I+  P PE    + +E       S  FK            
Sbjct: 200 RFPFPPEGEPPLGPIELLSYIVNMPNPE----LKDEPGNGIKWSEEFK------------ 243

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
                D + + L  +P +R    D L HP++
Sbjct: 244 -----DFIKQCLEKDPTRRPTPWDMLEHPWI 269

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 43.6 bits (104), Expect = 5e-05
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+R    +  +       +  +W  APE + + K  +KS D+WS G +L E+ + 
Sbjct: 143 ISDFGLSRDIYEDDYYRKRGGGKLPIKWM-APESLKDGKFTSKS-DVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG   VA   + ++   + +V T ++ APE++   K Y    DIWS+G  + EM + 
Sbjct: 142 LCDFG---VAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198

Query: 92  RP 93
            P
Sbjct: 199 NP 200

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 32  ICDFGL-ARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFG+ A +AD           +V T  + APE+M    GY    DIWS G    E+ +
Sbjct: 143 IADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT 202

Query: 91  NRPIFPGKHY 100
                P   Y
Sbjct: 203 GAA--PYSKY 210

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.5 bits (102), Expect = 7e-05
 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 56  ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPT 115
            T ++ +PE+ ++ +GY +  D+WSV C + EM++ +P  P   Y + +  I  I   PT
Sbjct: 171 GTPYWMSPEV-ISGEGYGRKADVWSVACTVVEMLTEKP--PWAEY-EAMAAIFKIATQPT 226

Query: 116 PEDLSCIINEKARSYLQSL 134
              L   +++  R +L+ +
Sbjct: 227 KPMLPDGVSDACRDFLKQI 245

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 42/154 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTE-YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFG+ +    E+   G  T  +  T  Y APEI+   + Y KS+D W+ G +L EM++
Sbjct: 142 IADFGMCK----ENIFGGKTTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLA 196

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +P F G+   D+             ++L   I E   SY +SL                
Sbjct: 197 GQPPFDGE---DE-------------DELFQSIMEHNVSYPKSL---------------S 225

Query: 151 PNALDLLGKMLTFNPHKRIGV-----EDALAHPY 179
             A+ +   +LT +P KR+G       D   H +
Sbjct: 226 KEAVSICKGLLTKHPAKRLGCGPTGERDIREHAF 259

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.9 bits (101), Expect = 9e-05
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 32/136 (23%)

Query: 32  ICDFG----LARVADPEHDHTGFLTEYVATRWYRAPEIM-LNSKGYTKSIDIWSVGCILA 86
           I DFG    LA +       TG L        Y APE++    +GY    DIWS+GC + 
Sbjct: 150 ISDFGTSKRLAGINPCTETFTGTLQ-------YMAPEVIDKGPRGYGAPADIWSLGCTIV 202

Query: 87  EMISNRPIFPGKHYLDQLNHILGILG-----SPTPEDLSCIINEKARSYLQSLPFKPKVP 141
           EM + +P F     L +    +  +G        PE LS     +A++++    F+P   
Sbjct: 203 EMATGKPPF---IELGEPQAAMFKVGMFKIHPEIPESLS----AEAKNFILRC-FEPD-- 252

Query: 142 WEILYPNADPNALDLL 157
                P+   +A DLL
Sbjct: 253 -----PDKRASAHDLL 263

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 42.9 bits (101), Expect = 9e-05
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 5/67 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA V  PE +    +   V T  Y APE++ N + YT S D W +GC++ EMI  
Sbjct: 143 ISDLGLA-VEIPEGET---IRGRVGTVGYMAPEVVKNER-YTFSPDWWGLGCLIYEMIEG 197

Query: 92  RPIFPGK 98
           +  F  +
Sbjct: 198 KSPFRQR 204

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 18/31 (58%), Positives = 21/31 (67%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
           ML+ +  KRI    ALAHPY  QY+DP DEP
Sbjct: 281 MLVLDSDKRISASEALAHPYFSQYHDPEDEP 311

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 15/22 (68%), Positives = 15/22 (68%)

Query: 239 KMLMFNPHKRIGVEGALAHPYL 260
           KML FNPHKRI    AL HPY 
Sbjct: 266 KMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 38/154 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG      PE       +  V T ++ APE+ +  K Y   +DIWS+G +  EM+  
Sbjct: 156 LTDFGFCAQITPEQSKR---STMVGTPYWMAPEV-VTRKAYGPKVDIWSLGIMAIEMVEG 211

Query: 92  RPIFPGKHYLDQLNHILGILGSP---TPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
            P +  ++ L  L +++   G+P    PE LS I             F+           
Sbjct: 212 EPPYLNENPLRAL-YLIATNGTPELQNPEKLSAI-------------FR----------- 246

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
                 D L + L  +  KR   ++ L HP+L+ 
Sbjct: 247 ------DFLNRCLEMDVEKRGSAKELLQHPFLKI 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 34  DFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
           DFG AR+   P      +   YV T +Y  PEI  N     KS DIWS+GCIL E+ + +
Sbjct: 143 DFGSARLLTSP----GAYACTYVGTPYYVPPEIWENMPYNNKS-DIWSLGCILYELCTLK 197

Query: 93  PIF 95
             F
Sbjct: 198 HPF 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           DFG+ARV    +         + T +Y +PEI  N + Y    DIW++GC+L EM + + 
Sbjct: 144 DFGIARVL---NSTVELARTCIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKH 199

Query: 94  IF 95
            F
Sbjct: 200 AF 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 29/122 (23%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           D GL R    +   T      V T +Y +PE  ++  GY    DIWS+GC+L EM + + 
Sbjct: 149 DLGLGRFFSSK---TTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQS 204

Query: 94  IF----------------------PGKHYLDQLNHILGILGSPTPE---DLSCIINEKAR 128
            F                      P  HY ++L  ++    +P PE   D+S ++     
Sbjct: 205 PFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264

Query: 129 SY 130
            +
Sbjct: 265 MH 266

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPAD 29
           ML+ +P KRI V+ AL HPY+  +YDP++
Sbjct: 294 MLVIDPEKRISVDDALQHPYINVWYDPSE 322

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 24/82 (29%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQ--------------------YYDPADEPVAEEPFRF 278
           +ML+F+P KRI    ALAHPYL++                     Y    EP A  PF  
Sbjct: 270 RMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYTSDFEPSANPPFDD 329

Query: 279 SMELD----DLPKETLKRLIFE 296
             E +       KE L + I E
Sbjct: 330 EYEKNLTSVRQVKEELHQFILE 351

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA V                T  Y APE++   + Y  S+D +++GC L EMI+ 
Sbjct: 136 ISDLGLA-VELKGGKKI---KGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAG 190

Query: 92  RPIF 95
           R  F
Sbjct: 191 RSPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 38/175 (21%), Positives = 61/175 (34%), Gaps = 47/175 (26%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-----RWYRAPE-----IMLNSKGYTKSIDIWSV 81
           +CDFG+          +G L   +A      + Y APE         +  YT   D+WS+
Sbjct: 144 LCDFGV----------SGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSL 193

Query: 82  GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP 141
           G  + EM   R  +P + Y +    +  I+    P                +LP      
Sbjct: 194 GLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP----------------TLP------ 231

Query: 142 WEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWREN 196
                     +A D + K L   P++R      L HP+L +Y +   +   W   
Sbjct: 232 -----SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNADVDMAEWVTG 281

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 5/67 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA V  PE +    +   V T  Y APE+ LN++ YT S D W +GC++ EMI  
Sbjct: 143 ISDLGLA-VKIPEGE---SIRGRVGTVGYMAPEV-LNNQRYTLSPDYWGLGCLIYEMIEG 197

Query: 92  RPIFPGK 98
           +  F G+
Sbjct: 198 QSPFRGR 204

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D G+A++       T F    V T +Y +PE +   K Y +  D+W++G +L E  + 
Sbjct: 142 IGDLGVAKLLSDN---TNFANTIVGTPYYLSPE-LCEDKPYNEKSDVWALGVVLYECCT- 196

Query: 92  RPIFPGKHYLDQLNHILGIL 111
                GKH  D  N    IL
Sbjct: 197 -----GKHPFDANNQGALIL 211

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 51/204 (25%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL +      +H G  + +  T  Y APE+ L+ + Y +++D W +G +L EM+  
Sbjct: 137 LTDFGLCK---ENIEHNGTTSTFCGTPEYLAPEV-LHKQPYDRTVDWWCLGAVLYEMLYG 192

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F  ++  +  ++IL                        + P +       L PN   
Sbjct: 193 LPPFYSRNTAEMYDNIL------------------------NKPLQ-------LKPNITN 221

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLM--FNPHKRI 209
           +A  LL  +L  +  KR+G +D         ++     P++W +   K +   FNP+   
Sbjct: 222 SARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFF----SPINWDDLINKKITPPFNPN--- 274

Query: 210 GVEGALAHPYLEQYYDP--ADEPV 231
                ++ P   +++DP   +EPV
Sbjct: 275 -----VSGPNDLRHFDPEFTEEPV 293

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 14/161 (8%)

Query: 27  PADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 86
           P +  + DFG A   D  H  T     +  T    +PE +L    Y    DIWS G +L 
Sbjct: 221 PENAVLGDFGAACKLD-AHPDTPQCYGWSGTLETNSPE-LLALDPYCAKTDIWSAGLVLF 278

Query: 87  EM-ISNRPIFPGK-----HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKP-- 138
           EM + N  +F  +       L  +   + +     P++ S  + +  + Y  ++  +P  
Sbjct: 279 EMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQY--AIVLRPPY 336

Query: 139 KVPWEILYPNADPNALD-LLGKMLTFNPHKRIGVEDALAHP 178
            +P  ++        ++ L+ KMLTF+   R   +D L+ P
Sbjct: 337 TIP-PVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376

Length = 392

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+R    +  +       +  RW  APE + +    +KS D+WS G +L E+ + 
Sbjct: 146 ISDFGLSRDVYDDDYYRKKTGGKLPIRWM-APESLKDGIFTSKS-DVWSFGVLLWEIFTL 203

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 14/21 (66%), Positives = 14/21 (66%)

Query: 1   MLMFNPHKRIGVEGALAHPYL 21
           ML FNPHKRI    AL HPY 
Sbjct: 267 MLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDP--ADEPICDFGLARVADPEH 45
           ML+ +P KRI V+ AL HPY+  +YDP  A+ P      A++ + EH
Sbjct: 298 MLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREH 344

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 41/178 (23%), Positives = 67/178 (37%), Gaps = 49/178 (27%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRP 93
           DFGL +      +H+   + +  T  Y APE+ L  + Y +++D W +G +L EM+   P
Sbjct: 139 DFGLCK---EGIEHSKTTSTFCGTPEYLAPEV-LRKQPYDRTVDWWCLGAVLYEMLYGLP 194

Query: 94  IFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA 153
            F  +                T E    I+N+  R                L PN   +A
Sbjct: 195 PFYSRD---------------TAEMYDNILNKPLR----------------LKPNISVSA 223

Query: 154 LDLLGKMLTFNPHKRIG----VEDALAHPYLEQYYDPADEPVSWRENWGKMLM--FNP 205
             LL  +L  +  KR+G      +   H +           ++W +   K +   FNP
Sbjct: 224 RHLLEGLLQKDRTKRLGAKDDFLEIKNHVFF--------SSINWDDLVNKKITPPFNP 273

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 26/106 (24%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS--- 90
           D GL R    +   T      V T +Y +PE  ++  GY    DIWS+GC+L EM +   
Sbjct: 149 DLGLGRFFSSK---TTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQS 204

Query: 91  -------------------NRPIFPGKHYLDQLNHILGILGSPTPE 117
                              + P  P +HY ++L  ++ +   P P+
Sbjct: 205 PFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPD 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA V  PE   T  +   V T  Y APE++ N + YT S D W++GC+L EMI+ 
Sbjct: 143 ISDLGLA-VHVPE-GQT--IKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAG 197

Query: 92  RPIF 95
           +  F
Sbjct: 198 QSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
           ML+ +   RI    ALAHPY E+++DP DE 
Sbjct: 281 MLVLDAESRITAAEALAHPYFEEFHDPEDET 311

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 36/157 (22%)

Query: 32  ICDFGLA-----RVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 86
           +CDFG++      +AD           +V T  Y +PE  +    YT   D+WS+G  + 
Sbjct: 145 LCDFGVSGELINSIAD----------TFVGTSTYMSPE-RIQGGKYTVKSDVWSLGISII 193

Query: 87  EMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
           E+   + P        D  +  +GIL     + L  I+ E            P++P    
Sbjct: 194 ELALGKFPFAFSNIDDDGQDDPMGIL-----DLLQQIVQEPP----------PRLPSS-D 237

Query: 146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
           +P    +  D +   L  +P +R   +   A P   Q
Sbjct: 238 FP---EDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 32/130 (24%)

Query: 55  VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSP 114
           V T  Y APE+ + + GY K  D WS+G I+ EM+   P F                 S 
Sbjct: 197 VGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEMLIGYPPF----------------CSE 239

Query: 115 TPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG---V 171
           TP++       K  ++ ++L F P+VP           A DL+ +  T +   RIG   V
Sbjct: 240 TPQE----TYRKVMNWKETLVFPPEVP-------ISEKAKDLILRFCT-DSENRIGSNGV 287

Query: 172 EDALAHPYLE 181
           E+  +HP+ E
Sbjct: 288 EEIKSHPFFE 297

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 9/84 (10%)

Query: 26  DPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGC 83
           +P    + DFG A  + P +        +V T ++ APE++L  +   Y   +D+WS+G 
Sbjct: 156 EPGQVKLADFGSASKSSPAN-------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 208

Query: 84  ILAEMISNRPIFPGKHYLDQLNHI 107
              E+   +P     + +  L HI
Sbjct: 209 TCIELAERKPPLFNMNAMSALYHI 232

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 7/66 (10%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG   V+    D       +V TR Y +PE +  +  YT   DIWS+G  L EM   
Sbjct: 141 LCDFG---VSGQLIDSMA--NSFVGTRSYMSPERLQGTH-YTVQSDIWSLGLSLVEMAIG 194

Query: 92  R-PIFP 96
           R PI P
Sbjct: 195 RYPIPP 200

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 26/106 (24%)

Query: 34  DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS--- 90
           D GL R    +   T      V T +Y +PE  ++  GY    DIWS+GC+L EM +   
Sbjct: 149 DLGLGRFFSSK---TTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQS 204

Query: 91  -------------------NRPIFPGKHYLDQLNHILGILGSPTPE 117
                              + P  P  HY ++L  ++ +  +P PE
Sbjct: 205 PFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPE 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 14/23 (60%), Positives = 17/23 (73%)

Query: 238 GKMLMFNPHKRIGVEGALAHPYL 260
            +ML ++PHKRI  E ALAHPY 
Sbjct: 261 SQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 234 RENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPK--ETLK 291
           R+   KML+ +  KRI V+ AL HPY+  +YDP+ E  A  P     +LD+     E  K
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYINVWYDPS-EAEAPPPKIPDKQLDEREHTIEEWK 353

Query: 292 RLIFEE 297
            LI++E
Sbjct: 354 ELIYKE 359

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 32  ICDFGLARVADPEHD-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFGLA+V   + D +           WY APE +  SK  + S D+WS G  L E+ +
Sbjct: 150 ISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APECLRTSKFSSAS-DVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 32  ICDFGLARVADPEHDHTGFLTE-YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFG+ +    EH   G  T  +  T  Y APEI +  + Y KS+D W+ G +L EM++
Sbjct: 142 IADFGMCK----EHMVDGVTTRTFCGTPDYIAPEI-IAYQPYGKSVDWWAYGVLLYEMLA 196

Query: 91  NRPIFPGK 98
            +P F G+
Sbjct: 197 GQPPFDGE 204

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)

Query: 32  ICDFGLAR--VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           ICDFGLAR    DP++   G  +  +  +W  APE + + K YT   D+WS G +L E+ 
Sbjct: 215 ICDFGLARDIYKDPDYVRKG--SARLPLKWM-APESIFD-KVYTTQSDVWSFGVLLWEIF 270

Query: 90  S 90
           S
Sbjct: 271 S 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 40.5 bits (94), Expect = 6e-04
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 26  DPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGC 83
           +P    + DFG A +A P +        +V T ++ APE++L  +   Y   +D+WS+G 
Sbjct: 160 EPGQVKLADFGSASIASPAN-------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 212

Query: 84  ILAEMISNRPIFPGKHYLDQLNHI 107
              E+   +P     + +  L HI
Sbjct: 213 TCIELAERKPPLFNMNAMSALYHI 236

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 40.8 bits (95), Expect = 7e-04
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 55  VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIF 95
           V T  Y APE++L + GYT+  D WSVG IL EM+  +P F
Sbjct: 209 VGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG A+      D T  L     T  Y APE+ + SKG+ K++D W++G ++ EM+  
Sbjct: 142 LTDFGFAKKL---RDRTWTL---CGTPEYLAPEV-IQSKGHNKAVDWWALGILIYEMLVG 194

Query: 92  RPIFPGK 98
            P F   
Sbjct: 195 YPPFFDD 201

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 40.3 bits (94), Expect = 8e-04
 Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 52/173 (30%)

Query: 32  ICDFGLARVADPEHDHTGFLTE-YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFG+ +    E    G  T  +  T  Y APEI L    Y  S+D W++G +L EM+ 
Sbjct: 137 LADFGMCK----EGIFNGKTTSTFCGTPDYIAPEI-LQEMLYGPSVDWWAMGVLLYEMLC 191

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDL-SCIINEKARSYLQSLPFKPKVPWEILYPN- 148
               F  +                  +DL   I+N+                 E++YP  
Sbjct: 192 GHAPFEAE----------------NEDDLFEAILND-----------------EVVYPTW 218

Query: 149 ADPNALDLLGKMLTFNPHKRIGV-----EDA-LAHPYL-----EQYYDPADEP 190
              +A+D+L   +T NP  R+G      E+A L HP+      E+      EP
Sbjct: 219 LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEP 271

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 40.5 bits (94), Expect = 9e-04
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-SKGYTKSIDIWSVGCILAEMIS 90
           I DFGL++    E          V T +Y +PE++L+ +K Y    D+W++GCI+ E+ S
Sbjct: 183 IGDFGLSKNIGIE----SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238

Query: 91  NRPIFPGKHYLDQL 104
            +  F   +   QL
Sbjct: 239 GKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 14/23 (60%), Positives = 18/23 (78%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQ 23
           ML+F+P KRI    ALAHPYL++
Sbjct: 271 MLVFDPDKRISAADALAHPYLDE 293

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 16/29 (55%), Positives = 22/29 (75%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPAD 29
           ML+ +P KRI V+ AL HPY+  +YDPA+
Sbjct: 294 MLVIDPAKRISVDEALQHPYINVWYDPAE 322

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 18/116 (15%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT------------RWYRAPEIMLNSKGYTKSIDIW 79
           +C  GL ++ D      GF   Y AT             +Y APEI    K Y+K  D++
Sbjct: 176 LCSNGLVKLGD-----FGFSKMYAATVSDDVGRTFCGTPYYVAPEIW-RRKPYSKKADMF 229

Query: 80  SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP 135
           S+G +L E+++ +  F G++  + ++  L     P P  +S  + E   + L S P
Sbjct: 230 SLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDP 285

Length = 496

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 50/187 (26%), Positives = 71/187 (37%), Gaps = 34/187 (18%)

Query: 27  PADEPICDFGLARVADPEHDHTGFLTEYVATRWY--------RAPEIMLNSKGYTKSIDI 78
           P D  + DFG A           F  +  A ++Y         APE +L    Y  ++DI
Sbjct: 218 PGDVCLGDFGAA----------CFPVDINANKYYGWAGTIATNAPE-LLARDPYGPAVDI 266

Query: 79  WSVGCILAEMISNRPIFPGKHYLD-------QLNHIL---GILGSPTPEDLSCIINEKAR 128
           WS G +L EM +       K  LD       Q+  I+   G   +  P D    ++E   
Sbjct: 267 WSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI 326

Query: 129 SYLQSLPFKP--KVPWEILYPNADPNALD-LLGKMLTFNPHKRIGVEDALAHPYLEQYYD 185
              +    KP  +  W  LY    P  L+ L+ KML F+ H R   E  L     +   D
Sbjct: 327 GLAKKSSRKPGSRPLWTNLY--ELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384

Query: 186 PADEPVS 192
           P   P+ 
Sbjct: 385 PYPNPME 391

Length = 391

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA V  PE +    +   V T  Y APE++ N K YT S D W +GC++ EMI  
Sbjct: 143 ISDLGLA-VQIPEGET---VRGRVGTVGYMAPEVINNEK-YTFSPDWWGLGCLIYEMIQG 197

Query: 92  RPIF 95
           +  F
Sbjct: 198 QSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)

Query: 32  ICDFGLAR--VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           ICDFGLAR    DP++   G     +  +W  APE + + + YT   D+WS G +L E+ 
Sbjct: 220 ICDFGLARDIYKDPDYVRKG--DARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIF 275

Query: 90  S-NRPIFPGKH 99
           S     +PG  
Sbjct: 276 SLGASPYPGVK 286

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + D GLA V   +       T+   T  Y APEI L  + Y+  +D +++GC + EM++ 
Sbjct: 136 LSDLGLA-VELKDGKTI---TQRAGTNGYMAPEI-LKEEPYSYPVDWFAMGCSIYEMVAG 190

Query: 92  RPIF 95
           R  F
Sbjct: 191 RTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 38/151 (25%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CD+GL ++      + G       T  Y +PE  +    Y  S D W+VG +  E+++ 
Sbjct: 151 LCDYGLCKIIGTPSCYDG-------TLDYFSPE-KIKGHNYDVSFDWWAVGVLTYELLT- 201

Query: 92  RPIFPGKH-YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
                GKH + +  +  L        E L        +   + LPF   V          
Sbjct: 202 -----GKHPFKEDEDEEL------DLESL-------LKRQQKKLPFIKNV---------S 234

Query: 151 PNALDLLGKMLTFNPHKR-IGVEDALAHPYL 180
            NA D +  ML +N + R     + + HP+L
Sbjct: 235 KNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265

Length = 267

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 46/160 (28%)

Query: 32  ICDFGLARVADPEHDHTGFLTE-YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFG+ +    E    G  T  +  T  Y APEI L    Y  S+D W++G ++ EM++
Sbjct: 137 LADFGMCK----EGILNGVTTTTFCGTPDYIAPEI-LQELEYGPSVDWWALGVLMYEMMA 191

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN-A 149
            +P F   +  D    IL         D                        ++LYP   
Sbjct: 192 GQPPFEADNEDDLFESIL--------HD------------------------DVLYPVWL 219

Query: 150 DPNALDLLGKMLTFNPHKRIG------VEDA-LAHPYLEQ 182
              A+ +L   +T NP+KR+G       EDA   HP+ ++
Sbjct: 220 SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 47/160 (29%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVA------TRWYRAPEIM---LNSKGYTKSIDIWSVG 82
           +CDFG+          +G+L + VA       + Y APE +   LN KGY    D+WS+G
Sbjct: 145 LCDFGI----------SGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLG 194

Query: 83  CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW 142
             + E+ + R  FP   +      +  ++  P+                      P++P 
Sbjct: 195 ITMIELATGR--FPYDSWKTPFQQLKQVVEEPS----------------------PQLPA 230

Query: 143 EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
           E   P       D + K L  N  +R    + L HP+ E 
Sbjct: 231 EKFSPEFQ----DFVNKCLKKNYKERPNYPELLQHPFFEL 266

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 6/61 (9%)

Query: 32  ICDFGLAR--VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           ICDFGLAR    DP++   G     +  +W  APE + + K YT   D+WS G +L E+ 
Sbjct: 214 ICDFGLARDIYKDPDYVRKG--DARLPLKWM-APESIFD-KVYTTQSDVWSFGVLLWEIF 269

Query: 90  S 90
           S
Sbjct: 270 S 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 14/21 (66%), Positives = 16/21 (76%)

Query: 1   MLMFNPHKRIGVEGALAHPYL 21
           ML ++PHKRI  E ALAHPY 
Sbjct: 263 MLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 38.6 bits (91), Expect = 0.002
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 239 KMLMFNPHKRIGVEGALAHPYL 260
           KML +NP KRI  + AL HPY 
Sbjct: 261 KMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 9/84 (10%)

Query: 26  DPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGC 83
           +P    + DFG A +  P +        +V T ++ APE++L  +   Y   +D+WS+G 
Sbjct: 150 EPGTVKLADFGSASLVSPAN-------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 202

Query: 84  ILAEMISNRPIFPGKHYLDQLNHI 107
              E+   +P     + +  L HI
Sbjct: 203 TCIELAERKPPLFNMNAMSALYHI 226

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 36/152 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG+ +        T     +  T  Y APEI+L  K Y  S+D WS G +L EM+  
Sbjct: 137 IADFGMCKENMLGDAKT---CTFCGTPDYIAPEILLGQK-YNTSVDWWSFGVLLYEMLIG 192

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +  F   H  D+                     E  +S     P  P+  W         
Sbjct: 193 QSPF---HGHDE--------------------EELFQSIRMDNPCYPR--W------LTR 221

Query: 152 NALDLLGKMLTFNPHKRIGVE-DALAHPYLEQ 182
            A D+L K+    P +R+GV+ D   HP+  +
Sbjct: 222 EAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 238 GKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFR--FSMELDDLPKETLKRLIF 295
            ++L F+P  R   E ALA PY +       EP A+   +  F  E   L KE ++ LI+
Sbjct: 271 ERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSAQPITKLEFEFERRRLTKEDVRELIY 330

Query: 296 EE 297
            E
Sbjct: 331 RE 332

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR+ + ++++T         +W  APE  L  +   KS D+WS G +L E+++ 
Sbjct: 143 IADFGLARLIE-DNEYTARQGAKFPIKW-TAPEAALYGRFTIKS-DVWSFGILLTELVTK 199

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPED 118
            R  +PG +  + L  +      P P+D
Sbjct: 200 GRVPYPGMNNREVLEQVERGYRMPCPQD 227

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	308
KOG0660|consensus	359		100.0
KOG0659|consensus	318		100.0
KOG0593|consensus	396		100.0
KOG0661|consensus	538		100.0
KOG0658|consensus	364		100.0
KOG0665|consensus	369		100.0
KOG0663|consensus	419		100.0
KOG0594|consensus	323		100.0
KOG0600|consensus	560		100.0
KOG0666|consensus	438		100.0
KOG0667|consensus	586		100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0605|consensus	550		100.0
KOG0598|consensus	357		100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0581|consensus	364		100.0
KOG0615|consensus	475		100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
KOG0662|consensus	292		100.0
KOG0592|consensus	604		100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0599|consensus	411		100.0
KOG0669|consensus	376		100.0
KOG0575|consensus	592		99.98
KOG0664|consensus	449		99.98
KOG0616|consensus	355		99.97
KOG0694|consensus	694		99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
KOG0033|consensus	355		99.97
KOG0588|consensus	786		99.97
KOG0671|consensus	415		99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
KOG0591|consensus	375		99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
KOG0578|consensus	550		99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
KOG0583|consensus	370		99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
PHA03212	391	serine/threonine kinase US3; Provisional	99.96
KOG0198|consensus	313		99.96
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
KOG0604|consensus	400		99.96
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.96
KOG0690|consensus	516		99.96
KOG0597|consensus	808		99.96
KOG0670|consensus	752		99.96
KOG0612|consensus	1317		99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
KOG0986|consensus	591		99.95
KOG0582|consensus	516		99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
KOG4717|consensus	864		99.95
KOG0614|consensus	732		99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
KOG0032|consensus	382		99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.95
KOG0983|consensus	391		99.95
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.95
KOG0585|consensus	576		99.95
KOG0201|consensus	467		99.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.95
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.95
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
KOG0596|consensus	677		99.94
KOG0668|consensus	338		99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
KOG0580|consensus	281		99.94
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.94
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.94
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.94
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.94
KOG0603|consensus	612		99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.94
KOG0610|consensus	459		99.94
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.94
PHA03211	461	serine/threonine kinase US3; Provisional	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
KOG0595|consensus	429		99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
KOG0696|consensus	683		99.94
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.94
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.94
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.94
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.94
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.94
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.93
KOG0589|consensus	426		99.93
PTZ00283	496	serine/threonine protein kinase; Provisional	99.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.93
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.93
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.93
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.93
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.93
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.93
PHA03209	357	serine/threonine kinase US3; Provisional	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
PHA03210	501	serine/threonine kinase US3; Provisional	99.93
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.93
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.93
KOG4279|consensus	1226		99.93
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
KOG0608|consensus	1034		99.92
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.92
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.92
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.92
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.92
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.92
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.92
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.92
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.92
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.92
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.92
KOG4645|consensus	1509		99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.92
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.92
KOG0192|consensus	362		99.92
PHA02988	283	hypothetical protein; Provisional	99.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.92
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.92
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.92
KOG0579|consensus	1187		99.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.91
KOG1006|consensus	361		99.91
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.91
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.91
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
KOG0611|consensus	668		99.91
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.91
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.91
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.91
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.91
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.91
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.91
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.91
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.91
KOG0607|consensus	463		99.91
KOG0574|consensus	502		99.9
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.9
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.9
KOG0577|consensus	948		99.9
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.9
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.9
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.9
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.9
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.9
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.9
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.9
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.9
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.9
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.9
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.9
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.9
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.9
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.9
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.9
KOG0584|consensus	632		99.9
PHA02882	294	putative serine/threonine kinase; Provisional	99.9
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.9
KOG4236|consensus	888		99.9
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.9
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.9
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.9
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.9
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.89
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.89
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.89
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.89
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.89
KOG1290|consensus	590		99.89
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.89
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.89
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.89
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.89
KOG0197|consensus	468		99.89
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.89
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.89
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.89
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.89
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.89
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.89
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.89
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.89
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.89
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.89
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.89
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.89
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.88
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.88
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.88
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.88
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.88
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.88
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.88
PLN00181	793	protein SPA1-RELATED; Provisional	99.88
KOG2345|consensus	302		99.88
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.88
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.88
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.88
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.88
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.88
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.88
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.88
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.88
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.88
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.88
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.88
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.88
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.88
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.88
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.88
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.88
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.88
KOG0695|consensus	593		99.88
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
KOG1989|consensus	738		99.88
KOG1027|consensus	903		99.88
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.88
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.88
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.87
KOG4721|consensus	904		99.87
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.87
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.87
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.87
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.87
KOG1035|consensus	1351		99.87
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.87
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.87
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.87
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.87
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.87
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.87
KOG1167|consensus	418		99.87
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.87
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.87
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.87
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.87
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.87
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.87
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.87
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.87
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.87
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.87
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.87
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.87
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.87
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.87
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.87
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.87
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.87
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.87
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.87
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.87
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.87
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.87
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.86
KOG0586|consensus	596		99.86
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.86
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.86
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.86
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.86
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.86
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.86
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.86
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.86
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.86
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.86
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.86
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.86
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.86
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.86
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.86
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.86
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.86
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.86
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.85
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.85
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.85
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.85
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.85
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.85
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.85
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.85
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.85
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.85
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.85
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.85
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.85
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.85
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.85
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.85
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.85
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.84
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.84
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.84
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.84
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.84
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.84
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.84
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.84
KOG0193|consensus	678		99.84
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.84
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.84
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.84
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.84
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.83
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.83
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.83
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.83
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.83
KOG0984|consensus	282		99.83
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.82
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.82
KOG1026|consensus	774		99.82
KOG1151|consensus	775		99.82
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.81
KOG0587|consensus	953		99.81
KOG0606|consensus	1205		99.81
KOG3653|consensus	534		99.8
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.8
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.8
KOG1095|consensus	1025		99.8
KOG1187|consensus	361		99.79
KOG4257|consensus	974		99.79
KOG0199|consensus	1039		99.78
KOG0196|consensus	996		99.77
KOG0590|consensus	601		99.75
KOG0200|consensus	609		99.75
KOG4250|consensus	732		99.73
KOG0603|consensus	612		99.73
KOG0194|consensus	474		99.72
KOG1094|consensus	807		99.72
KOG4278|consensus	1157		99.72
KOG0576|consensus	829		99.7
KOG2052|consensus	513		99.68
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.65
KOG1033|consensus	516		99.63
KOG1025|consensus	1177		99.58
KOG1024|consensus	563		99.57
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.55
KOG1240|consensus	1431		99.52
KOG1345|consensus	378		99.51
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.5
KOG1152|consensus	772		99.48
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.45
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.39
KOG0590|consensus	601		99.31
KOG4158|consensus	598		99.3
KOG0606|consensus	1205		99.25
KOG1023|consensus	484		98.98
KOG1164|consensus	322		98.95
KOG1163|consensus	341		98.78
KOG1165|consensus	449		98.77
PRK12274	218	serine/threonine protein kinase; Provisional	98.67
PRK09188	365	serine/threonine protein kinase; Provisional	98.62
KOG2137|consensus	700		98.62
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.6
KOG0195|consensus	448		98.59
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.52
KOG1166|consensus	974		98.37
KOG0601|consensus	524		98.31
COG4248	637	Uncharacterized protein with protein kinase and he	97.64
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.53
KOG0601|consensus	524		97.38
PRK10345	210	hypothetical protein; Provisional	97.15
smart00090	237	RIO RIO-like kinase.	97.14
KOG0659|consensus	318		97.11
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.77
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.75
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	96.7
PRK14879	211	serine/threonine protein kinase; Provisional	96.69
KOG0665|consensus	369		96.53
KOG1266|consensus	458		96.47
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.43
KOG0033|consensus	355		96.24
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.18
KOG0671|consensus	415		96.12
KOG1093|consensus	725		95.95
KOG0670|consensus	752		95.7
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	95.69
KOG0663|consensus	419		95.69
KOG0599|consensus	411		95.29
KOG1826|consensus	2724		95.29
KOG0662|consensus	292		95.26
PHA03212	391	serine/threonine kinase US3; Provisional	95.24
KOG0666|consensus	438		94.99
KOG1167|consensus	418		94.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	94.89
PHA03209	357	serine/threonine kinase US3; Provisional	94.86
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	94.81
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	94.76
KOG0660|consensus	359		94.58
KOG0661|consensus	538		94.57
PTZ00284	467	protein kinase; Provisional	94.56
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	94.5
KOG1243|consensus	690		94.49
KOG0667|consensus	586		94.48
PTZ00036	440	glycogen synthase kinase; Provisional	94.35
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	94.15
PRK10271	188	thiK thiamine kinase; Provisional	94.1
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	94.01
KOG0615|consensus	475		93.76
KOG1290|consensus	590		93.58
KOG0594|consensus	323		93.5
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	93.34
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	92.76
KOG0576|consensus	829		92.71
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	92.64
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	92.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	92.56
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	92.5
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	92.44
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	92.38
PHA03211	461	serine/threonine kinase US3; Provisional	92.12
KOG0664|consensus	449		92.11
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.07
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	92.07
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	92.01
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	91.63
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	91.41
PHA03210	501	serine/threonine kinase US3; Provisional	91.36
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.27
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	90.9
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	90.8
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	90.76
KOG0588|consensus	786		90.63
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	90.62
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	90.34
KOG3087|consensus	229		90.3
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	90.29
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	90.28
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	90.2
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	90.11

>KOG0660|consensus

Probab=100.00  E-value=7.1e-56  Score=371.50  Aligned_cols=211  Identities=54%  Similarity=0.933  Sum_probs=195.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|+|++       .+|.+||||||+||..... ...+.+|.++.|+||||||+++....|+.++||||+|||
T Consensus       146 ViHRDLKPsNll~n-------~~c~lKI~DFGLAR~~~~~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI  217 (359)
T KOG0660|consen  146 VIHRDLKPSNLLLN-------ADCDLKICDFGLARYLDKF-FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCI  217 (359)
T ss_pred             ccccccchhheeec-------cCCCEEeccccceeecccc-CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHH
Confidence            36999999999999       9999999999999988765 456678999999999999999998999999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||++|+++|+|.+..+|+..|...+|+|+++.+..+.+.+++.|+++++..++.+|..+++++++.+++||.+||.+|
T Consensus       218 ~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fd  297 (359)
T KOG0660|consen  218 LAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFD  297 (359)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFN  244 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  244 (308)
                      |.+|+||+|+|+||||                                                                
T Consensus       298 P~kRita~eAL~hPYl----------------------------------------------------------------  313 (359)
T KOG0660|consen  298 PKKRITAEEALAHPYL----------------------------------------------------------------  313 (359)
T ss_pred             ccccCCHHHHhcChhh----------------------------------------------------------------
Confidence            9999999999999998                                                                


Q ss_pred             CCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhccCC
Q psy7274         245 PHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQED  305 (308)
Q Consensus       245 p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  305 (308)
                                      ..+|+|++||.+...|.. ++.. ++.++||++||+|+..|++..
T Consensus       314 ----------------~~~hdp~dEP~~~~~~~~-~~~~-~~~~~~r~~i~~e~~~~~~~~  356 (359)
T KOG0660|consen  314 ----------------APYHDPEDEPVCQPIFDS-FEHE-LTEEELRELIYKEILDFHPDV  356 (359)
T ss_pred             ----------------hhhcCCccCCCCCCCCcc-cccc-ccHHHHHHHHHHHHHhhCccc
Confidence                            557889999988655443 3434 899999999999999999764

>KOG0659|consensus

Probab=100.00  E-value=4.6e-43  Score=282.78  Aligned_cols=170  Identities=41%  Similarity=0.719  Sum_probs=147.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||.|+||+       ++|.+||+|||+|+.+.+....   .+..|.|+||||||+++|.+.|+..+||||+|||
T Consensus       122 IlHRDlKPnNLLis-------~~g~lKiADFGLAr~f~~p~~~---~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI  191 (318)
T KOG0659|consen  122 ILHRDLKPNNLLIS-------SDGQLKIADFGLARFFGSPNRI---QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCI  191 (318)
T ss_pred             hhcccCCccceEEc-------CCCcEEeecccchhccCCCCcc---cccceeeeeccChHHhccchhcCCcchhhhHHHH
Confidence            46999999999999       9999999999999998765432   3445899999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||+.|.+.|+|.++.+|+..|++.+|+|.++.|..+..-....-++   ..+..+...+++.++.++.||+.+||.+|
T Consensus       192 ~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~---~~P~~~~~~lf~aas~d~ldLl~~m~~yn  268 (318)
T KOG0659|consen  192 FAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ---QFPKPPLNNLFPAASSDALDLLSKMLTYN  268 (318)
T ss_pred             HHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh---cCCCCccccccccccHHHHHHHHhhhccC
Confidence            999999999999999999999999999999999998765432222122   34455556689999999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      |.+|+||.|+|+|+||+..+.++
T Consensus       269 P~~Rita~qaL~~~yf~~~P~pt  291 (318)
T KOG0659|consen  269 PKKRITASQALKHPYFKSLPLPT  291 (318)
T ss_pred             chhcccHHHHhcchhhhcCCCCC
Confidence            99999999999999998755443

>KOG0593|consensus

Probab=100.00  E-value=8.1e-43  Score=286.13  Aligned_cols=167  Identities=37%  Similarity=0.689  Sum_probs=142.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .+|.+||||||+||.+..+.   ...|.||.|+||||||++.+...|+.++||||+||++
T Consensus       123 IHRDIKPENILit-------~~gvvKLCDFGFAR~L~~pg---d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~  192 (396)
T KOG0593|consen  123 IHRDIKPENILIT-------QNGVVKLCDFGFARTLSAPG---DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVF  192 (396)
T ss_pred             ecccCChhheEEe-------cCCcEEeccchhhHhhcCCc---chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHH
Confidence            5999999999999       99999999999999987533   2368899999999999999988899999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC-CCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF-KPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++|.++|+|.++.+|+..|...+|...|....-+.......-+ ++|. ....+++..+|+++..+.||+++||+.|
T Consensus       193 aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv-~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~d  271 (396)
T KOG0593|consen  193 AELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV-RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMD  271 (396)
T ss_pred             HHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee-ecCCCCCccchhhhcccchHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999888765533221111111 1222 3445677889999999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |++|++++|+|.|+||.++
T Consensus       272 P~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  272 PDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             ccccccHHHHhcChHHHHH
Confidence            9999999999999999665

>KOG0661|consensus

Probab=100.00  E-value=2.1e-41  Score=292.72  Aligned_cols=167  Identities=38%  Similarity=0.654  Sum_probs=149.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      -|||+|||||||.       .+..|||+|||+||.+.+...    .|.||.|+||||||+++....|+.++||||+|||+
T Consensus       132 FHRDlKPENiLi~-------~~~~iKiaDFGLARev~SkpP----YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~  200 (538)
T KOG0661|consen  132 FHRDLKPENILIS-------GNDVIKIADFGLAREVRSKPP----YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIM  200 (538)
T ss_pred             ccccCChhheEec-------ccceeEecccccccccccCCC----cchhhhcccccchHHhhhccccCCchHHHHHHHHH
Confidence            4999999999998       688999999999998865433    58899999999999999888899999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +|+++-+++|+|.++.+|+.+|++++|+|....|..... -+....-.+|.....++..+.+.++.++.+||.+||.+||
T Consensus       201 aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~-La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP  279 (538)
T KOG0661|consen  201 AELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN-LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDP  279 (538)
T ss_pred             HHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH-HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999988876421 2333444677788888999999999999999999999999


Q ss_pred             CCCCCHHHHhcCCcccccc
Q psy7274         166 HKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~  184 (308)
                      .+||||+|+|+||||+...
T Consensus       280 ~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  280 DKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             ccCccHHHHhcCccccccc
Confidence            9999999999999998643

>KOG0658|consensus

Probab=100.00  E-value=7e-41  Score=281.73  Aligned_cols=168  Identities=39%  Similarity=0.767  Sum_probs=144.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -+||||||+|+|+|+      ..|.+||||||.|+....+...    .+|+.|+.|||||++++...|+.++||||.||+
T Consensus       146 IcHRDIKPqNlLvD~------~tg~LKicDFGSAK~L~~~epn----iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV  215 (364)
T KOG0658|consen  146 ICHRDIKPQNLLVDP------DTGVLKICDFGSAKVLVKGEPN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCV  215 (364)
T ss_pred             cccCCCChheEEEcC------CCCeEEeccCCcceeeccCCCc----eeEEEeccccCHHHHcCccccCceeEEhhhhHH
Confidence            489999999999995      7799999999999998765543    568999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccc-cCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI-LYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||+.|+++|+|++..+|+..|++++|+|+.+++..+-...   .....+.....+|.. +....++++.+|+.++|++
T Consensus       216 ~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y---~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y  292 (364)
T KOG0658|consen  216 MAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNY---TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQY  292 (364)
T ss_pred             HHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccc---ccccCcccccccceeecccCCCHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999887553211   122234445555555 5677899999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccC
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~  185 (308)
                      +|.+|.++.|++.||||....+
T Consensus       293 ~P~~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  293 SPSKRLSALEALAHPFFDELRD  314 (364)
T ss_pred             ChhhcCCHHHHhcchhhHHhhC
Confidence            9999999999999999976533

>KOG0665|consensus

Probab=100.00  E-value=3.7e-40  Score=272.36  Aligned_cols=165  Identities=41%  Similarity=0.769  Sum_probs=143.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||++.       .+|.+||+|||+|+.-...    -.++.+++|+.|+|||++++ .+|...+||||+||++
T Consensus       140 ihRdLkPsnivv~-------~~~~lKi~dfg~ar~e~~~----~~mtpyVvtRyyrapevil~-~~~ke~vdiwSvGci~  207 (369)
T KOG0665|consen  140 IHRDLKPSNIVVN-------SDCTLKILDFGLARTEDTD----FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  207 (369)
T ss_pred             eecccCcccceec-------chhheeeccchhhcccCcc----cccCchhheeeccCchheec-cCCcccchhhhhhhHH
Confidence            5999999999998       9999999999999976543    23788999999999999986 4599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCC------------ChhH
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA------------DPNA  153 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------s~~~  153 (308)
                      +||++|+.+|+|.+..+|+.++.+.+|+|.+..+.++. ...+.|..+.+......+.+.+|+.            +..+
T Consensus       208 gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~-~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~a  286 (369)
T KOG0665|consen  208 GELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ-PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLA  286 (369)
T ss_pred             HHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh-HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHH
Confidence            99999999999999999999999999999999887764 4567777777776666666665542            3568


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ++|+.+||..||++|.+++++|+|||++-|
T Consensus       287 rdll~~MLvi~pe~Risv~daL~HPY~~vw  316 (369)
T KOG0665|consen  287 RDLLSKMLVIDPEKRISVDDALRHPYIKVW  316 (369)
T ss_pred             HHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence            999999999999999999999999999754

>KOG0663|consensus

Probab=100.00  E-value=1.7e-40  Score=275.71  Aligned_cols=172  Identities=35%  Similarity=0.609  Sum_probs=144.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|||||++|+|+.       ..|.+||+|||+||.++.+..   .++..|.|.||||||++++...|++++||||+|||
T Consensus       198 ilHRDLK~SNLLm~-------~~G~lKiaDFGLAR~ygsp~k---~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI  267 (419)
T KOG0663|consen  198 ILHRDLKTSNLLLS-------HKGILKIADFGLAREYGSPLK---PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCI  267 (419)
T ss_pred             eEecccchhheeec-------cCCcEEecccchhhhhcCCcc---cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHH
Confidence            36999999999998       999999999999999876532   26888999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCC--CChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN--ADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~ll~~~L~  162 (308)
                      ++||++++++|+|.+..+|+.+|+..+|+|....|..+..-...+.. ..+..+...+...|+.  .+....+|+.++|.
T Consensus       268 ~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~-~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt  346 (419)
T KOG0663|consen  268 FAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKM-TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLT  346 (419)
T ss_pred             HHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhcc-ccCCCCchhhhhhccccccchhHHHHHHHHhc
Confidence            99999999999999999999999999999999999876554333221 1222233333444444  45999999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccCCC
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      +||.+|.||+|+|+|.||...+.+.
T Consensus       347 ~dP~kR~tA~~~L~h~~F~e~P~p~  371 (419)
T KOG0663|consen  347 YDPGKRITAEDGLKHEYFRETPLPI  371 (419)
T ss_pred             cCccccccHHHhhcccccccCCCCC
Confidence            9999999999999999998865543

>KOG0594|consensus

Probab=100.00  E-value=9.8e-39  Score=268.82  Aligned_cols=168  Identities=38%  Similarity=0.713  Sum_probs=144.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       ++|.+||+|||+|+...-+..   ..++.++|.||||||++++...|+..+||||+|||+
T Consensus       142 lHRDLKPQNlLi~-------~~G~lKlaDFGlAra~~ip~~---~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIf  211 (323)
T KOG0594|consen  142 LHRDLKPQNLLIS-------SSGVLKLADFGLARAFSIPMR---TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIF  211 (323)
T ss_pred             ecccCCcceEEEC-------CCCcEeeeccchHHHhcCCcc---cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHH
Confidence            6999999999999       899999999999997653322   257789999999999999988899999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCC-CCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKP-KVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++++++|+|.++.+++.+|.+.+|+|....|..+.....  |....+... ..++....+..++++.+++.+||+++
T Consensus       212 aEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~--~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~  289 (323)
T KOG0594|consen  212 AEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPD--YKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYD  289 (323)
T ss_pred             HHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcccccc--ccccCcCCCCccchHHhccccCccHHHHHHHHhccC
Confidence            999999999999999999999999999999999987653222  221333333 55666667778899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~  185 (308)
                      |.+|.||..+|.||||.....
T Consensus       290 p~~R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  290 PAKRISAKGALTHPYFSELPE  310 (323)
T ss_pred             cccCcCHHHHhcChhhccccc
Confidence            999999999999999977533

>KOG0600|consensus

Probab=100.00  E-value=1e-38  Score=277.85  Aligned_cols=170  Identities=34%  Similarity=0.541  Sum_probs=141.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||.+|||||       .+|.+||+|||+|+.+.....  ..+|..|.|.||||||+++|...|+.++|+||+||||
T Consensus       240 lHRDIK~SNiLid-------n~G~LKiaDFGLAr~y~~~~~--~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl  310 (560)
T KOG0600|consen  240 LHRDIKGSNILID-------NNGVLKIADFGLARFYTPSGS--APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCIL  310 (560)
T ss_pred             eeccccccceEEc-------CCCCEEeccccceeeccCCCC--cccccceEEeeccChHHhcCCcccccceeehhhhHHH
Confidence            6999999999999       899999999999998765542  2378899999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      .||+.|+++|+|.++.+|+.+|+.+.|.|....|....-.....+..  .......+.+.+..+++.+.+|+..||.+||
T Consensus       311 ~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp--~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP  388 (560)
T KOG0600|consen  311 AELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKP--QQPYKRRLRETFKDFPASALDLLEKLLSLDP  388 (560)
T ss_pred             HHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCC--CCcccchHHHHhccCCHHHHHHHHHHhccCc
Confidence            99999999999999999999999999999999887221111111110  1112333455677899999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .+|.||.++|+|+||..-..+
T Consensus       389 ~kR~tA~~aL~seyF~t~p~~  409 (560)
T KOG0600|consen  389 DKRGTASSALQSEYFTTEPLP  409 (560)
T ss_pred             cccccHHHHhcCcccccCCCC
Confidence            999999999999999544333

>KOG0666|consensus

Probab=100.00  E-value=7.1e-36  Score=246.22  Aligned_cols=178  Identities=36%  Similarity=0.596  Sum_probs=136.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||.|||+...   -...|.|||+|||+||.+..+...-......|.|.||||||+++|...|+.++||||+|||+
T Consensus       154 lHRDLKPaNIlvmgd---gperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIf  230 (438)
T KOG0666|consen  154 LHRDLKPANILVMGD---GPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIF  230 (438)
T ss_pred             eeccCCcceEEEecc---CCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHH
Confidence            699999999999821   11239999999999999876543332346678999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCCC---------HHHHHHHHHHhhCCCChhhHhhhhhHHHH-HHhhcCCC--CCCCCc---cccCCCCC
Q psy7274          86 AEMISNRPIFPGKH---------YLDQLNHILGILGSPTPEDLSCIINEKAR-SYLQSLPF--KPKVPW---EILYPNAD  150 (308)
Q Consensus        86 ~ell~g~~pf~~~~---------~~~~l~~i~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~---~~~~~~~s  150 (308)
                      +||++-.++|.|..         ..+|+.+|++++|+|..+.|..+.+.-.. ..++....  .....+   -.....-+
T Consensus       231 aElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~  310 (438)
T KOG0666|consen  231 AELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKD  310 (438)
T ss_pred             HHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCC
Confidence            99999999998753         36899999999999999998876542211 11111111  111111   11122346


Q ss_pred             hhHHHHHHHhcccCCCCCCCHHHHhcCCccccccCC
Q psy7274         151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       151 ~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      +.+.+||.+||++||.+|+|++++|+|+||.....+
T Consensus       311 ~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  311 PSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             chHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence            679999999999999999999999999999886444

>KOG0667|consensus

Probab=100.00  E-value=1.3e-35  Score=266.53  Aligned_cols=166  Identities=33%  Similarity=0.580  Sum_probs=130.5

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .-.|+|||||||||-.+     ..+.|||+|||.|+.....      ..+|+.++.|||||+++| ..|+.++|||||||
T Consensus       309 ~IIHcDLKPENILL~~~-----~r~~vKVIDFGSSc~~~q~------vytYiQSRfYRAPEVILG-lpY~~~IDmWSLGC  376 (586)
T KOG0667|consen  309 GIIHCDLKPENILLKDP-----KRSRIKVIDFGSSCFESQR------VYTYIQSRFYRAPEVILG-LPYDTAIDMWSLGC  376 (586)
T ss_pred             CeeeccCChhheeeccC-----CcCceeEEecccccccCCc------ceeeeeccccccchhhcc-CCCCCccceeehhh
Confidence            34799999999999732     4568999999999976533      347899999999999997 55999999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC---------------------------
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF---------------------------  136 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------  136 (308)
                      |++||++|.++|+|.++.+|+..|++++|.|++..+.....  ..+|..+...                           
T Consensus       377 IlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~--~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~  454 (586)
T KOG0667|consen  377 ILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK--AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKAR  454 (586)
T ss_pred             hHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc--cceehhccCCceeeeeeecccccccchhhhhhhhhhc
Confidence            99999999999999999999999999999999877664322  2233222100                           


Q ss_pred             -----C-CCCCccccCC-CCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         137 -----K-PKVPWEILYP-NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       137 -----~-~~~~~~~~~~-~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                           . ....+..... .....++|||++||.+||.+|+|+.++|+||||...
T Consensus       455 ~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  455 LERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             ccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence                 0 1111222222 234567999999999999999999999999999864

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.5e-34  Score=256.33  Aligned_cols=208  Identities=51%  Similarity=0.959  Sum_probs=177.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++......   .......+|..|+|||++.+...++.++|+||+||++
T Consensus       130 ~H~dlkp~Nil~~-------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  199 (337)
T cd07858         130 LHRDLKPSNLLLN-------ANCDLKICDFGLARTTSEKG---DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIF  199 (337)
T ss_pred             ecCCCCHHHEEEc-------CCCCEEECcCccccccCCCc---ccccccccccCccChHHHhcCCCCCCcccHHHHHHHH
Confidence            6999999999999       88999999999998764332   2234567899999999987545589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+....+..+....|.+.+..+..+.......+....+......+....+.+++++.+||.+||+.+|
T Consensus       200 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  279 (337)
T cd07858         200 AELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDP  279 (337)
T ss_pred             HHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCCh
Confidence            99999999999999999999999999999988887777777777777766666666666677899999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNP  245 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p  245 (308)
                      .+|||++++++||||...                                                              
T Consensus       280 ~~Rps~~ell~h~~~~~~--------------------------------------------------------------  297 (337)
T cd07858         280 SKRITVEEALAHPYLASL--------------------------------------------------------------  297 (337)
T ss_pred             hhccCHHHHHcCcchhhh--------------------------------------------------------------
Confidence            999999999999999542                                                              


Q ss_pred             CCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhcc
Q psy7274         246 HKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQ  303 (308)
Q Consensus       246 ~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  303 (308)
                                        +++...|.++.+|+|+|++...+.++++++|+.|+.+||+
T Consensus       298 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (337)
T cd07858         298 ------------------HDPSDEPVCQTPFSFDFEEDALTEEDIKELIYNEMLAYHP  337 (337)
T ss_pred             ------------------cCcccCccCCCccchhhhhhhcCHHHHHHHHHHHHhhcCC
Confidence                              3444556667789999998889999999999999999985

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0605|consensus

Probab=100.00  E-value=6.3e-35  Score=256.18  Aligned_cols=173  Identities=27%  Similarity=0.499  Sum_probs=141.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCC---------------------CCCC---------------
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPE---------------------HDHT---------------   48 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~---------------------~~~~---------------   48 (308)
                      =.||||||+|+|||       ..|++||+|||||......                     ....               
T Consensus       262 yIHRDIKPdNlLiD-------~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (550)
T KOG0605|consen  262 YIHRDIKPDNLLID-------AKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQL  334 (550)
T ss_pred             cccccCChhheeec-------CCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHH
Confidence            46999999999999       9999999999998643210                     0000               


Q ss_pred             --------CCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHh
Q psy7274          49 --------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLS  120 (308)
Q Consensus        49 --------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~  120 (308)
                              ....+.|||+-|+|||++++ .+|+..+|+||||||+||||.|.+||.+.+..+.+.+|++.-..       
T Consensus       335 ~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-------  406 (550)
T KOG0605|consen  335 QTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET-------  406 (550)
T ss_pred             HHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-------
Confidence                    01245799999999999986 66999999999999999999999999999999999998754211       


Q ss_pred             hhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCC---HHHHhcCCccccccCCCCCCchhhhhh
Q psy7274         121 CIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG---VEDALAHPYLEQYYDPADEPVSWRENW  197 (308)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t---~~eil~hp~f~~~~~~~~~~~~~~~~~  197 (308)
                                   +.....       ...+.++.|||.+||+ ||.+|++   ++||.+||||+.+            .|
T Consensus       407 -------------l~fP~~-------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v------------~W  453 (550)
T KOG0605|consen  407 -------------LKFPEE-------VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV------------DW  453 (550)
T ss_pred             -------------ccCCCc-------CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC------------Cc
Confidence                         111111       1356999999999999 9999996   8999999999886            77


Q ss_pred             hhhcccCCCccccccccccccccccccC
Q psy7274         198 GKMLMFNPHKRIGVEGALAHPYLEQYYD  225 (308)
Q Consensus       198 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~  225 (308)
                      +.+....|+..+.+...+|+.||+.|..
T Consensus       454 ~~l~~~~apfvP~v~~~~DT~yFddF~e  481 (550)
T KOG0605|consen  454 DHLREMPAPFVPQVNSELDTQYFDDFPE  481 (550)
T ss_pred             chhhcCCCCCCCCCCCcccccccccCcc
Confidence            8888888999999999999999997754

>KOG0598|consensus

Probab=100.00  E-value=2.8e-35  Score=248.39  Aligned_cols=169  Identities=27%  Similarity=0.444  Sum_probs=134.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||+|       .+|+++|+|||+|+........   ..++|||+.|||||++++ .+|+.+||+||+|+++
T Consensus       147 iyRDlKPENILLd-------~~GHi~LtDFgL~k~~~~~~~~---t~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGill  215 (357)
T KOG0598|consen  147 IYRDLKPENILLD-------EQGHIKLTDFGLCKEDLKDGDA---TRTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILL  215 (357)
T ss_pred             eeccCCHHHeeec-------CCCcEEEeccccchhcccCCCc---cccccCCccccChHHHhc-CCCCcccchHhHHHHH
Confidence            6999999999999       9999999999999965433222   356799999999999986 5799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|.+||.+.+.......|...-...                              ...-.+.+++++|+++|+.||
T Consensus       216 YeML~G~pPF~~~~~~~~~~~I~~~k~~~------------------------------~p~~ls~~ardll~~LL~rdp  265 (357)
T KOG0598|consen  216 YEMLTGKPPFYAEDVKKMYDKILKGKLPL------------------------------PPGYLSEEARDLLKKLLKRDP  265 (357)
T ss_pred             HHHhhCCCCCcCccHHHHHHHHhcCcCCC------------------------------CCccCCHHHHHHHHHHhccCH
Confidence            99999999999999888888776432110                              011268999999999999999


Q ss_pred             CCCC----CHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccC
Q psy7274         166 HKRI----GVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  225 (308)
Q Consensus       166 ~~R~----t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~  225 (308)
                      ++|+    .++++.+||||..+        +|.....+.  ..|...+.+.+..+.++|+..+.
T Consensus       266 ~~RLg~~~d~~~ik~HpfF~~i--------nW~~l~~k~--l~PpF~P~~~~~~~~~~Fd~eft  319 (357)
T KOG0598|consen  266 RQRLGGPGDAEEIKRHPFFKGI--------NWEKLLAKK--LSPPFKPNVTGLEDTSNFDNEFT  319 (357)
T ss_pred             HHhcCCCCChHHhhcCcccccC--------CHHHHHhcC--CCCCeecCCCCccccccccHHHH
Confidence            9997    58899999999874        554444433  34566677777777777776544

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=8.7e-34  Score=251.32  Aligned_cols=171  Identities=48%  Similarity=0.846  Sum_probs=143.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+++...............+||..|+|||++.+. ..++.++||||+||+
T Consensus       125 vH~dlkp~NIll~-------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvv  197 (338)
T cd07859         125 FHRDLKPKNILAN-------ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI  197 (338)
T ss_pred             ecCCCCHHHeEEC-------CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHH
Confidence            6999999999999       89999999999998653322112223456899999999997542 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|++||.+.+...++..+....|.|....+..+.......+..........++...++..++.+.++|.+||..|
T Consensus       198 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  277 (338)
T cd07859         198 FAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFD  277 (338)
T ss_pred             HHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcC
Confidence            99999999999999999999999999999999888877776666666666555556666667788999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |++|||++++++||||+..
T Consensus       278 P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         278 PKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             cccCCCHHHHhcCchhhhc
Confidence            9999999999999999763

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0581|consensus

Probab=100.00  E-value=1.1e-34  Score=244.99  Aligned_cols=145  Identities=26%  Similarity=0.497  Sum_probs=117.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       +.|.|||||||.++.+...     ...+++||..|||||.+.+ ..|+.++||||||+.+
T Consensus       201 IHRDIKPsNlLvN-------skGeVKicDFGVS~~lvnS-----~a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsl  267 (364)
T KOG0581|consen  201 IHRDIKPSNLLVN-------SKGEVKICDFGVSGILVNS-----IANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSL  267 (364)
T ss_pred             eeccCCHHHeeec-------cCCCEEeccccccHHhhhh-----hcccccccccccChhhhcC-CcCCcccceecccHHH
Confidence            6999999999998       9999999999999987544     2577899999999999975 5699999999999999


Q ss_pred             HHHhhCCCCCCCC--CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMISNRPIFPGK--HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~g~~pf~~~--~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      .|+++|+.||...  .....+..+..+...|+|....                          ..+|+++++|+..||+.
T Consensus       268 lE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~--------------------------~~fS~ef~~FV~~CL~K  321 (364)
T KOG0581|consen  268 LELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE--------------------------GEFSPEFRSFVSCCLRK  321 (364)
T ss_pred             HHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc--------------------------ccCCHHHHHHHHHHhcC
Confidence            9999999999774  2333444444444444442111                          13689999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccCCCCC
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYDPADE  189 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~~~~~  189 (308)
                      ||.+|+|+.|+++|||++........
T Consensus       322 dp~~R~s~~qLl~Hpfi~~~~~~~vd  347 (364)
T KOG0581|consen  322 DPSERPSAKQLLQHPFIKKFEDPNVD  347 (364)
T ss_pred             CcccCCCHHHHhcCHHHhhccccccc
Confidence            99999999999999999886554443

>KOG0615|consensus

Probab=100.00  E-value=1.5e-35  Score=252.51  Aligned_cols=144  Identities=30%  Similarity=0.464  Sum_probs=111.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG   82 (308)
                      -.||||||+|||+.    ....++.+||+|||+|+....    ..++.+.|||+.|.|||++.+.  ..++.++|+||+|
T Consensus       297 I~HRDiKPeNILl~----~~~e~~llKItDFGlAK~~g~----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlG  368 (475)
T KOG0615|consen  297 IIHRDIKPENILLS----NDAEDCLLKITDFGLAKVSGE----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLG  368 (475)
T ss_pred             cccccCCcceEEec----cCCcceEEEecccchhhcccc----ceehhhhcCCccccChhheecCCeecccchheeeecc
Confidence            36999999999998    112348999999999998753    3457889999999999998643  2355689999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHH-HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          83 CILAEMISNRPIFPGKHYLD-QLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |++|-+++|.+||.+..... ....|...-...-+..                           +..+|+++++||.+||
T Consensus       369 cvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~---------------------------w~~Iseea~dlI~~mL  421 (475)
T KOG0615|consen  369 CVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQ---------------------------WDRISEEALDLINWML  421 (475)
T ss_pred             ceEEEEeccCCCcccccCCccHHHHHhcCcccccChh---------------------------hhhhhHHHHHHHHHhh
Confidence            99999999999998765433 3333332211111111                           2346899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ..||+.|+|++|+|+||||+..
T Consensus       422 ~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  422 VVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             EeCcccCcCHHHHhcChhhhcc
Confidence            9999999999999999999864

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-33  Score=246.24  Aligned_cols=171  Identities=76%  Similarity=1.314  Sum_probs=147.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++...............+||..|+|||++.+...++.++|+||+||++
T Consensus       128 vH~dlkp~Nill~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil  200 (336)
T cd07849         128 LHRDLKPSNLLLN-------TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCIL  200 (336)
T ss_pred             eccCCCHHHEEEC-------CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999987654333333345568899999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+...++..+...++.+.++.+..+.......+....+.....++....+..+.++.++|.+||+.+|
T Consensus       201 ~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  280 (336)
T cd07849         201 AEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNP  280 (336)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCCh
Confidence            99999999999999999999999999999999888887777777777777666666666677789999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||+.++++||||+.+
T Consensus       281 ~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         281 HKRITVEEALAHPYLEQY  298 (336)
T ss_pred             hhCcCHHHHhcCcccccc
Confidence            999999999999999654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0662|consensus

Probab=100.00  E-value=2.3e-34  Score=220.37  Aligned_cols=166  Identities=34%  Similarity=0.683  Sum_probs=141.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||+||+|+||+       .+|.+|++|||+|+.+.-+.   .+.+..+.|.||++|.++++.+-|++..|+||.|||+
T Consensus       123 lhrdlkpqnllin-------~ngelkladfglarafgipv---rcysaevvtlwyrppdvlfgakly~tsidmwsagcif  192 (292)
T KOG0662|consen  123 LHRDLKPQNLLIN-------RNGELKLADFGLARAFGIPV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF  192 (292)
T ss_pred             hhccCCcceEEec-------cCCcEEecccchhhhcCCce---EeeeceeeeeeccCcceeeeeehhccchHhhhcchHH
Confidence            5999999999998       99999999999999886543   2245568899999999999988899999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+.. |+++|+|.+-.+|+.+|+..+|+|..+.|..+..-  ..|..-.-......|..+.|+.+...+||+.++|.-+
T Consensus       193 aelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l--pdyk~yp~ypattswsqivp~lns~grdllqkll~cn  270 (292)
T KOG0662|consen  193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL--PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCN  270 (292)
T ss_pred             HHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC--CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccC
Confidence            99986 88999999999999999999999999988865321  1111111123445677788899999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|++|+.+++||||...
T Consensus       271 p~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  271 PAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             cccccCHHHHhcCcccccc
Confidence            9999999999999999764

>KOG0592|consensus

Probab=100.00  E-value=1.5e-33  Score=247.59  Aligned_cols=139  Identities=26%  Similarity=0.432  Sum_probs=119.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC----------CCCccCcccccccchhhHhhCCCCCCc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH----------TGFLTEYVATRWYRAPEIMLNSKGYTK   74 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~gt~~y~aPE~l~~~~~~~~   74 (308)
                      -.||||||+|||+|       +++++||+|||.|+.+......          ....+++|||..|.+||++. ....++
T Consensus       195 IIHRDlKPENILLd-------~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~-~~~~~~  266 (604)
T KOG0592|consen  195 IIHRDLKPENILLD-------KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN-DSPAGP  266 (604)
T ss_pred             ceeccCChhheeEc-------CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhc-CCCCCc
Confidence            47999999999999       9999999999999987643221          11125689999999999985 456899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHH
Q psy7274          75 SIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNAL  154 (308)
Q Consensus        75 ~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  154 (308)
                      .+|+|+||||+|.|+.|.+||.+.+....+++|+.+-...                               .++.++.++
T Consensus       267 ~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~f-------------------------------p~~fp~~a~  315 (604)
T KOG0592|consen  267 SSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEF-------------------------------PEGFPEDAR  315 (604)
T ss_pred             ccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccC-------------------------------CCCCCHHHH
Confidence            9999999999999999999999999999999998654322                               235679999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         155 DLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       155 ~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      +|+.++|..||.+|+|+++|.+||||..
T Consensus       316 dLv~KLLv~dp~~Rlt~~qIk~HpFF~~  343 (604)
T KOG0592|consen  316 DLIKKLLVRDPSDRLTSQQIKAHPFFEG  343 (604)
T ss_pred             HHHHHHHccCccccccHHHHhhCccccc
Confidence            9999999999999999999999999977

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.6e-32  Score=243.79  Aligned_cols=165  Identities=49%  Similarity=0.902  Sum_probs=144.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.....      .+..+||..|+|||++.+...++.++||||+||++
T Consensus       140 vHrdikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  206 (343)
T cd07878         140 IHRDLKPSNVAVN-------EDCELRILDFGLARQADDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM  206 (343)
T ss_pred             ecccCChhhEEEC-------CCCCEEEcCCccceecCCC------cCCccccccccCchHhcCCccCCchhhhHhHHHHH
Confidence            6999999999999       8999999999999875432      34568999999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+....+.+.+..+..+.......+...++..+...+...+...++.+.+||.+||+.||
T Consensus       207 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp  286 (343)
T cd07878         207 AELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDS  286 (343)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCCh
Confidence            99999999999999999999999999999888887777766777777776666666666677788999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|+|++|+++||||..+
T Consensus       287 ~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         287 DKRISASEALAHPYFSQY  304 (343)
T ss_pred             hhCCCHHHHhcCcchhcc
Confidence            999999999999999653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=3e-32  Score=241.05  Aligned_cols=206  Identities=53%  Similarity=0.941  Sum_probs=171.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++       .++.+||+|||+|+........ .......+||..|+|||++.+...++.++|+||+||
T Consensus       126 ivH~dlkp~Nili~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv  198 (332)
T cd07857         126 VLHRDLKPGNLLVN-------ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGC  198 (332)
T ss_pred             cccCCCCHHHeEEc-------CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHH
Confidence            37999999999999       8899999999999876432211 112345689999999999876566899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|++||.+.+....+..+...+|.+..+.+..+.......+.......+..++....+..+..+.+|+.+||+.
T Consensus       199 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  278 (332)
T cd07857         199 ILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAF  278 (332)
T ss_pred             HHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccC
Confidence            99999999999999999999999999999998887777766655555555555555666666777889999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMF  243 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  243 (308)
                      ||.+|||+.+++.||||+.                                                             
T Consensus       279 ~P~~R~t~~~ll~~~~~~~-------------------------------------------------------------  297 (332)
T cd07857         279 DPTKRISVEEALEHPYLAI-------------------------------------------------------------  297 (332)
T ss_pred             CcccCCCHHHHhcChhhhh-------------------------------------------------------------
Confidence            9999999999999999944                                                             


Q ss_pred             CCCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHH
Q psy7274         244 NPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET  298 (308)
Q Consensus       244 ~p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  298 (308)
                                         +++|...|.|..+++++|++. -+++.+|.+|.+||
T Consensus       298 -------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  332 (332)
T cd07857         298 -------------------WHDPDDEPVCQKPFDFSFESE-DSMEELRDMIIEEV  332 (332)
T ss_pred             -------------------hcCccccccccccccCCcccc-ccHHHHHHHHhhcC
Confidence                               466777788888899998765 49999999999885

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=8.4e-32  Score=241.80  Aligned_cols=169  Identities=41%  Similarity=0.705  Sum_probs=134.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......  ....+..++|+.|+|||++.+...++.++||||+||+
T Consensus       124 ivH~dlkp~Nili~-------~~~~~kL~Dfg~a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  194 (372)
T cd07853         124 ILHRDIKPGNLLVN-------SNCVLKICDFGLARVEEPDE--SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCI  194 (372)
T ss_pred             eeCCCCChHHEEEC-------CCCCEEeccccceeecccCc--cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHH
Confidence            36999999999999       88999999999998654322  1123456789999999998765668999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCC--ccccCCCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP--WEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++||++|+.||.+.+..+++..+...+|.+..+.+..... ....+....+......  ........++++.+||.+||+
T Consensus       195 l~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~  273 (372)
T cd07853         195 FAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE-GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLV  273 (372)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH-HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCC
Confidence            9999999999999999999999999999999877765433 2333333322222111  112234568899999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .||.+|||++++++||||+..
T Consensus       274 ~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         274 FDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CChhhCcCHHHHhcCHhhCCC
Confidence            999999999999999999764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.9e-32  Score=241.36  Aligned_cols=205  Identities=47%  Similarity=0.830  Sum_probs=171.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++......      .....+|..|+|||++.+...++.++||||+||+
T Consensus       139 i~H~dlkp~Nill~-------~~~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~  205 (343)
T cd07851         139 IIHRDLKPSNIAVN-------EDCELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  205 (343)
T ss_pred             eecCCCCHHHeEEC-------CCCCEEEcccccccccccc------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHH
Confidence            37999999999999       8899999999999865432      3445789999999998765568899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++++++|+.||.+.+..+.+..+....+.+.+..+..+.......+....+......+...+...+..+.+||.+||..|
T Consensus       206 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~  285 (343)
T cd07851         206 MAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence            99999999999999999999999999998888877777666667777776666666666666778999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFN  244 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  244 (308)
                      |.+|||++++++||||..+..+                                                          
T Consensus       286 P~~Rpt~~ell~h~~~~~~~~~----------------------------------------------------------  307 (343)
T cd07851         286 PDKRITAAEALAHPYLAEYHDP----------------------------------------------------------  307 (343)
T ss_pred             hhhCCCHHHHhcCCCccccCCC----------------------------------------------------------
Confidence            9999999999999999654222                                                          


Q ss_pred             CCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhcc
Q psy7274         245 PHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQ  303 (308)
Q Consensus       245 p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  303 (308)
                                            .+++. ..+++.+++..++..++|+++|+.||.+|++
T Consensus       308 ----------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (343)
T cd07851         308 ----------------------EDEPV-APPYDQSFESRDLTVDEWKELVYKEIMNFKP  343 (343)
T ss_pred             ----------------------ccccc-ccccCcchhhhhcCHHHHHHHhHHHHHhccC
Confidence                                  22222 3567777777889999999999999999985

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0599|consensus

Probab=100.00  E-value=1.1e-33  Score=229.68  Aligned_cols=140  Identities=29%  Similarity=0.482  Sum_probs=117.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC-----CCCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-----SKGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DiWS   80 (308)
                      .||||||+|||++       .+.++||+|||+|+.+..+..    +...|||+.|.|||.+..     ..+|+..+|+|+
T Consensus       145 VHRDLKpENILld-------dn~~i~isDFGFa~~l~~Gek----LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa  213 (411)
T KOG0599|consen  145 VHRDLKPENILLD-------DNMNIKISDFGFACQLEPGEK----LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWA  213 (411)
T ss_pred             hhcccChhheeec-------cccceEEeccceeeccCCchh----HHHhcCCCcccChhheeeecccCCCCccchhhHHH
Confidence            6999999999999       999999999999999876543    677899999999999853     356899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +|+|+|.++.|.+||-.....-.+..|.+.-.......|                           .++|..++|||++|
T Consensus       214 ~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW---------------------------adis~~~KdLIsrl  266 (411)
T KOG0599|consen  214 CGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW---------------------------ADISATVKDLISRL  266 (411)
T ss_pred             HHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch---------------------------hhccccHHHHHHHH
Confidence            999999999999999777666666666654332222222                           35689999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |+.||.+|+|++|+|+||||.++
T Consensus       267 LqVdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  267 LQVDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             HeeCchhcccHHHHhcChHHHHH
Confidence            99999999999999999999654

>KOG0669|consensus

Probab=100.00  E-value=5.1e-33  Score=223.37  Aligned_cols=174  Identities=33%  Similarity=0.495  Sum_probs=140.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .|||+|++|+||+       .+|.+||+|||+|+.++...... ...+..+.|.||++||.++|.+.|++++|||..|||
T Consensus       146 lHRDmKaaNvLIt-------~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCi  218 (376)
T KOG0669|consen  146 LHRDMKAANVLIT-------KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCI  218 (376)
T ss_pred             HhhcccHhhEEEc-------CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHH
Confidence            5999999999999       99999999999998776543221 225777899999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhc--CCCCCCCCccccCC--CCChhHHHHHHHh
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQS--LPFKPKVPWEILYP--NADPNALDLLGKM  160 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~s~~~~~ll~~~  160 (308)
                      ++||.+|.++++|.+...++..|....|.-.++.|+.+.+.....-+..  ++............  .-++++.+||.+|
T Consensus       219 maeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~l  298 (376)
T KOG0669|consen  219 MAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKL  298 (376)
T ss_pred             HHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHH
Confidence            9999999999999999999999999999999998887655444333311  22222211111111  1257899999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccccCC
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      |.+||.+|+++.+++.|.||..-+.+
T Consensus       299 l~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  299 LKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             hccCcccCcchHhhhchhhhhcCCcc
Confidence            99999999999999999999765444

>KOG0575|consensus

Probab=99.98  E-value=9.4e-33  Score=246.00  Aligned_cols=145  Identities=28%  Similarity=0.488  Sum_probs=124.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||..|++++       ++.+|||+|||+|..+..+...   -.+.|||+.|.|||++. ..+++..+||||+||+|
T Consensus       140 iHRDLKLGNlfL~-------~~~~VKIgDFGLAt~le~~~Er---k~TlCGTPNYIAPEVl~-k~gHsfEvDiWSlGcvm  208 (592)
T KOG0575|consen  140 IHRDLKLGNLFLN-------ENMNVKIGDFGLATQLEYDGER---KKTLCGTPNYIAPEVLN-KSGHSFEVDIWSLGCVM  208 (592)
T ss_pred             eecccchhheeec-------CcCcEEecccceeeeecCcccc---cceecCCCcccChhHhc-cCCCCCchhhhhhhhHH
Confidence            6999999999999       9999999999999988755332   25679999999999986 57799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |.|+.|+|||..++-.+.+.+|...-..                               +...+|.+|++||.+||..||
T Consensus       209 YtLL~G~PPFetk~vkety~~Ik~~~Y~-------------------------------~P~~ls~~A~dLI~~lL~~~P  257 (592)
T KOG0575|consen  209 YTLLVGRPPFETKTVKETYNKIKLNEYS-------------------------------MPSHLSAEAKDLIRKLLRPNP  257 (592)
T ss_pred             HhhhhCCCCcccchHHHHHHHHHhcCcc-------------------------------cccccCHHHHHHHHHHhcCCc
Confidence            9999999999999988888888643211                               112578999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCch
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVS  192 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~  192 (308)
                      .+|||+++||.|+||+....+...+++
T Consensus       258 ~~Rpsl~~vL~h~Ff~~g~~p~~lp~~  284 (592)
T KOG0575|consen  258 SERPSLDEVLDHPFFKSGFTPARLPSS  284 (592)
T ss_pred             ccCCCHHHHhcCHhhhCCCcCCCCCcc
Confidence            999999999999999777777666654

>KOG0664|consensus

Probab=99.98  E-value=1e-32  Score=224.09  Aligned_cols=169  Identities=36%  Similarity=0.621  Sum_probs=140.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||.|+|++       ++|.+||||||+||......  ...++..+.|.+|+|||++.|.+.|+.++||||+|||+
T Consensus       178 LHRDIKPGNLLVN-------SNCvLKICDFGLARvee~d~--~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF  248 (449)
T KOG0664|consen  178 LHRDIKPGNLLVN-------SNCILKICDFGLARTWDQRD--RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF  248 (449)
T ss_pred             hhccCCCccEEec-------cCceEEecccccccccchhh--hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHH
Confidence            6999999999998       99999999999999876543  33478889999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCc-cccCC--CCChhHHHHHHHhcc
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW-EILYP--NADPNALDLLGKMLT  162 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~~ll~~~L~  162 (308)
                      .|++.++.+|...+..+++..|.+.+|+|+.+.+..-.........+..+..+..+. -.+..  ....++.+++.+||.
T Consensus       249 aELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~  328 (449)
T KOG0664|consen  249 AELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLH  328 (449)
T ss_pred             HHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhC
Confidence            999999999999999999999999999999999886655444444443333333221 11111  344678899999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      +||++|++.++++.|+|....
T Consensus       329 ~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  329 FDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             CCCcccccHhhhccccccccc
Confidence            999999999999999999764

>KOG0616|consensus

Probab=99.97  E-value=2.1e-32  Score=224.31  Aligned_cols=164  Identities=28%  Similarity=0.445  Sum_probs=131.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .+|||||+|||||       ++|.+||+|||+|+.+...      .-+.|||+.|+|||++. .++|+.++|+||+|+++
T Consensus       166 iYRDLKPENiLlD-------~~G~iKitDFGFAK~v~~r------T~TlCGTPeYLAPEii~-sk~ynkavDWWalGVLI  231 (355)
T KOG0616|consen  166 IYRDLKPENLLLD-------QNGHIKITDFGFAKRVSGR------TWTLCGTPEYLAPEIIQ-SKGYNKAVDWWALGVLI  231 (355)
T ss_pred             eeccCChHHeeec-------cCCcEEEEeccceEEecCc------EEEecCCccccChHHhh-cCCCCcchhHHHHHHHH
Confidence            5799999999999       9999999999999987543      35679999999999986 47799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||+.|.+||.+.+....+.+|++.--                               .+.+..++++++||+++|+.|-
T Consensus       232 YEMlaG~pPF~~~~~~~iY~KI~~~~v-------------------------------~fP~~fs~~~kdLl~~LL~vD~  280 (355)
T KOG0616|consen  232 YEMLAGYPPFYDDNPIQIYEKILEGKV-------------------------------KFPSYFSSDAKDLLKKLLQVDL  280 (355)
T ss_pred             HHHHcCCCCCcCCChHHHHHHHHhCcc-------------------------------cCCcccCHHHHHHHHHHHhhhh
Confidence            999999999999999988888875311                               1123578999999999999999


Q ss_pred             CCCC-----CHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  223 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  223 (308)
                      .+|.     +.++|..||||++        +.|.....+-... |...+......++.+|+.+
T Consensus       281 t~R~gnlknG~~dIk~H~wF~~--------v~W~~i~~r~ie~-P~~pp~~~~~gdtsnfd~y  334 (355)
T KOG0616|consen  281 TKRFGNLKNGVEDIKNHPWFKG--------VDWEAILQRKIEP-PFEPPNIHGPGDTSNFDDY  334 (355)
T ss_pred             HhhhcCcCCCccccccCccccc--------ccHHHHhhccccC-CCCCccccCCccccccccc
Confidence            9995     4789999999986        5676666653322 2222455555566666554

>KOG0694|consensus

Probab=99.97  E-value=3.5e-32  Score=245.20  Aligned_cols=169  Identities=22%  Similarity=0.438  Sum_probs=139.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .+||||.+|||+|       ..|++||+|||+++..-...   ...+++|||+.|+|||++.+ ..|+.++|+||+||++
T Consensus       490 IYRDlKLdNiLLD-------~eGh~kiADFGlcKe~m~~g---~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLl  558 (694)
T KOG0694|consen  490 IYRDLKLDNLLLD-------TEGHVKIADFGLCKEGMGQG---DRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLL  558 (694)
T ss_pred             eeeecchhheEEc-------ccCcEEecccccccccCCCC---CccccccCChhhcChhhhcc-CcccchhhHHHHHHHH
Confidence            4799999999999       99999999999999654222   22578899999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||+.|..||+|++..+....|..---                               .....+|.+++++|+++|..+|
T Consensus       559 yeML~Gq~PF~gddEee~FdsI~~d~~-------------------------------~yP~~ls~ea~~il~~ll~k~p  607 (694)
T KOG0694|consen  559 YEMLVGESPFPGDDEEEVFDSIVNDEV-------------------------------RYPRFLSKEAIAIMRRLLRKNP  607 (694)
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHhcCCC-------------------------------CCCCcccHHHHHHHHHHhccCc
Confidence            999999999999999999988864210                               0112578999999999999999


Q ss_pred             CCCCCH-----HHHhcCCccccccCCCCCCchhhhhhhhhcc--cCCCccccccccccccccccccCCCC
Q psy7274         166 HKRIGV-----EDALAHPYLEQYYDPADEPVSWRENWGKMLM--FNPHKRIGVEGALAHPYLEQYYDPAD  228 (308)
Q Consensus       166 ~~R~t~-----~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~  228 (308)
                      .+|+++     ++|.+||||+.+            +|..+..  ..|+.++.+.+..|..+|++.+....
T Consensus       608 ~kRLG~~e~d~~~i~~hpFFr~i------------~w~~L~~r~i~PPf~P~i~~~~D~snFd~eFt~e~  665 (694)
T KOG0694|consen  608 EKRLGSGERDAEDIKKHPFFRSI------------DWDDLLNRRIKPPFVPTIKGPEDVSNFDEEFTSEK  665 (694)
T ss_pred             ccccCCCCCCchhhhhCCccccC------------CHHHHhhccCCCCCCcccCChhhhcccchhhhcCC
Confidence            999974     789999999885            3454443  56888888888889889887766543

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=4.2e-31  Score=236.62  Aligned_cols=165  Identities=39%  Similarity=0.734  Sum_probs=129.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......    .....+||..|+|||++.+ ..++.++||||+||++
T Consensus       148 vH~Dlkp~NIll~-------~~~~~kL~DfG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il  215 (364)
T cd07875         148 IHRDLKPSNIVVK-------SDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  215 (364)
T ss_pred             ecCCCCHHHEEEC-------CCCcEEEEeCCCccccCCCC----cccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHH
Confidence            6999999999999       88999999999998654321    1345689999999999865 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccC------------CCCChhH
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY------------PNADPNA  153 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~s~~~  153 (308)
                      |+|++|+.||.+.+..+.+..+...++.|.++.+..+. .....+....+......+...+            ...+..+
T Consensus       216 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (364)
T cd07875         216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA  294 (364)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhh-HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHH
Confidence            99999999999999999999999999999887655432 2233333333332222222211            1235678


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ++||.+||+.||.+|||++++|+||||..+
T Consensus       295 ~dll~~mL~~dP~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         295 RDLLSKMLVIDASKRISVDEALQHPYINVW  324 (364)
T ss_pred             HHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence            999999999999999999999999999654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=1.9e-31  Score=231.31  Aligned_cols=163  Identities=36%  Similarity=0.693  Sum_probs=131.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+...++.++||||+||++
T Consensus       125 vH~dlkp~Nil~~-------~~~~~kl~DfG~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l  194 (288)
T cd07871         125 LHRDLKPQNLLIN-------EKGELKLADFGLARAKSVPTK---TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIL  194 (288)
T ss_pred             ccCCCCHHHEEEC-------CCCCEEECcCcceeeccCCCc---cccCceecccccChHHhcCCcccCcHHHHHHHHHHH
Confidence            6999999999999       889999999999986543211   134457899999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHH-HHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKA-RSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++|++||.+.+..+.+..+....+.|..+.+..+..... ..+.  .+.....++....+..+.++++||++||++|
T Consensus       195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d  272 (288)
T cd07871         195 YEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYL--FPQYRAQPLINHAPRLDTDGIDLLSSLLLYE  272 (288)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccc--cCccCCCchHHhCCCCCHHHHHHHHHhcCcC
Confidence            999999999999999999999999999999988776543211 1111  1222223333445678899999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|+|++|+++||||
T Consensus       273 p~~R~t~~~~l~hp~f  288 (288)
T cd07871         273 TKSRISAEAALRHSYF  288 (288)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.5e-31  Score=234.84  Aligned_cols=172  Identities=58%  Similarity=1.047  Sum_probs=147.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.++|+|||++.................+|.+|+|||++.+...++.++|+||+||+
T Consensus       124 i~H~dlkp~nili~-------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i  196 (330)
T cd07834         124 VIHRDLKPSNILVN-------SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI  196 (330)
T ss_pred             eecCCCCHHHEEEc-------CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHH
Confidence            37999999999999       88999999999999765543211224556789999999998765468999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|++||.+.+..+.+..+....|.+.+..+..........+....+.....++....+.++..+.++|.+||+.+
T Consensus       197 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  276 (330)
T cd07834         197 FAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD  276 (330)
T ss_pred             HHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence            99999999999999999999999999999998887766666677777777777777777778889999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++++++||||+.+
T Consensus       277 P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         277 PKKRITADEALAHPYLAQL  295 (330)
T ss_pred             hhhCCCHHHHHhCccHHhh
Confidence            9999999999999999654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=4.1e-31  Score=241.82  Aligned_cols=164  Identities=32%  Similarity=0.628  Sum_probs=128.0

Q ss_pred             CCCCCCCCCcccCccccccCCC-CCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDP-ADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~-~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .+ +.+||+|||+|+.......    ...++||+.|+|||++.+...|+.++||||+||+
T Consensus       192 iHrDLKp~NILl~-------~~~~~vkL~DFGla~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  260 (440)
T PTZ00036        192 CHRDLKPQNLLID-------PNTHTLKLCDFGSAKNLLAGQR----SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCI  260 (440)
T ss_pred             ecCCcCHHHEEEc-------CCCCceeeeccccchhccCCCC----cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHH
Confidence            6999999999998       44 4799999999987653321    2456889999999998766679999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccC-CCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY-PNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~ll~~~L~~  163 (308)
                      +|||++|.+||.+.+..+++..+...+|.|..+.+..... ....  ...+......+...+ ...+.++++||.+||++
T Consensus       261 l~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~-~~~~--~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~  337 (440)
T PTZ00036        261 IAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNP-NYAD--IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKY  337 (440)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhch-hhhc--ccCCccCchhHHHHhccCCCHHHHHHHHHHCCC
Confidence            9999999999999999999999999999988776653211 0000  011111122222222 24678999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+|+|+.|+|+||||..+
T Consensus       338 dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        338 EPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             ChhHCcCHHHHhCChhHHhh
Confidence            99999999999999999764

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=3.8e-31  Score=234.21  Aligned_cols=170  Identities=50%  Similarity=0.922  Sum_probs=145.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC-CCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+||+++       .++.+||+|||++........ ........+|+.+|+|||++.+...++.++|+||+||+
T Consensus       129 vH~dlkp~Nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~  201 (334)
T cd07855         129 IHRDLKPSNLLVN-------EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI  201 (334)
T ss_pred             ecCCCCHHHEEEc-------CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHH
Confidence            7999999999999       899999999999986543221 11223456899999999998654568999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|++||.+.+...++..+....|.|+...+..........+....+.....++....+..+.++.++|.+||+.+
T Consensus       202 l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  281 (334)
T cd07855         202 FAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFD  281 (334)
T ss_pred             HHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCC
Confidence            99999999999999999999999999999999888777766666677777777777777778888999999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||+++++.||||..
T Consensus       282 P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         282 PEERITVEQALQHPFLAQ  299 (334)
T ss_pred             hhhCcCHHHHHhChhhhh
Confidence            999999999999999954

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0033|consensus

Probab=99.97  E-value=1.8e-31  Score=213.61  Aligned_cols=164  Identities=25%  Similarity=0.407  Sum_probs=126.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||+||+|+|+..    .....-+||+|||+|..++...    ...+.+||+.|+|||++.. ..|+.++|||+.|+|+
T Consensus       132 vHRDvkP~nllLAS----K~~~A~vKL~~FGvAi~l~~g~----~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViL  202 (355)
T KOG0033|consen  132 VHRDLKPENLLLAS----KAKGAAVKLADFGLAIEVNDGE----AWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVIL  202 (355)
T ss_pred             eeccCChhheeeee----ccCCCceeecccceEEEeCCcc----ccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHH
Confidence            69999999999861    1234569999999999887322    2567899999999999875 5599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |-|+.|++||.|.+....+..|...-...++..                           ++.+++++++|+++||..||
T Consensus       203 fiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~---------------------------w~~is~~Ak~LvrrML~~dP  255 (355)
T KOG0033|consen  203 YILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPE---------------------------WDTVTPEAKSLIRRMLTVNP  255 (355)
T ss_pred             HHHHhCCCCCCCccHHHHHHHHhccccCCCCcc---------------------------cCcCCHHHHHHHHHHhccCh
Confidence            999999999999998888888875433222211                           34679999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPH  206 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (308)
                      ++|+|+.|+|+|||+.+- +.....+..++...++.+++..
T Consensus       256 ~kRIta~EAL~HpWi~~r-~~~As~~H~~dtvd~lrkfNar  295 (355)
T KOG0033|consen  256 KKRITADEALKHPWICNR-ERVASAIHRQDTVDCLKKFNAR  295 (355)
T ss_pred             hhhccHHHHhCCchhcch-HHHHHHhhhHHHHHHHHHhhHH
Confidence            999999999999999652 2222223334444455555443

>KOG0588|consensus

Probab=99.97  E-value=1.2e-31  Score=240.42  Aligned_cols=141  Identities=28%  Similarity=0.408  Sum_probs=120.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -+||||||+|+|+|       ..+.+||+|||+|..-..    ...+.+.||++.|.|||++.|..+.+.++||||+|||
T Consensus       133 icHRDLKpENlLLd-------~~~nIKIADFGMAsLe~~----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVI  201 (786)
T KOG0588|consen  133 ICHRDLKPENLLLD-------VKNNIKIADFGMASLEVP----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVI  201 (786)
T ss_pred             ceeccCCchhhhhh-------cccCEeeeccceeecccC----CccccccCCCcccCCchhhcCCCCCCCccccchhHHH
Confidence            58999999999999       788899999999986543    2346788999999999999887767899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||.|++|+.||.+++-...+.++....-                               .+..+++.++.+||++||..|
T Consensus       202 LfALLtG~LPFdDdNir~LLlKV~~G~f-------------------------------~MPs~Is~eaQdLLr~ml~VD  250 (786)
T KOG0588|consen  202 LFALLTGKLPFDDDNIRVLLLKVQRGVF-------------------------------EMPSNISSEAQDLLRRMLDVD  250 (786)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHcCcc-------------------------------cCCCcCCHHHHHHHHHHhccC
Confidence            9999999999998887777776654321                               112467899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      |.+|+|.+||++|||+..+....
T Consensus       251 p~~RiT~~eI~kHP~l~g~~~~~  273 (786)
T KOG0588|consen  251 PSTRITTEEILKHPFLSGYTSLP  273 (786)
T ss_pred             ccccccHHHHhhCchhhcCCCCC
Confidence            99999999999999998875543

>KOG0671|consensus

Probab=99.97  E-value=2.8e-32  Score=230.53  Aligned_cols=169  Identities=28%  Similarity=0.529  Sum_probs=125.6

Q ss_pred             CCCCCCCCCCcccCccc-------------cccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCC
Q psy7274           5 NPHKRIGVEGALAHPYL-------------EQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG   71 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~-------------~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~   71 (308)
                      -.|.||||+|||+-..-             ..+..+..|||+|||.|.......      ++.|.|+.|||||++++ .+
T Consensus       213 l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h------s~iVsTRHYRAPEViLg-LG  285 (415)
T KOG0671|consen  213 LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH------STIVSTRHYRAPEVILG-LG  285 (415)
T ss_pred             eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc------ceeeeccccCCchheec-cC
Confidence            36999999999964111             123356789999999998765432      55689999999999985 67


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcC--CC-------------
Q psy7274          72 YTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSL--PF-------------  136 (308)
Q Consensus        72 ~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~-------------  136 (308)
                      ++.++||||+||||+|+++|..+|++.++.+++.+|..++|..+...+.+..   ..+|....  .+             
T Consensus       286 wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~---~~Kyf~~~rldw~e~~~~~~~k~v~  362 (415)
T KOG0671|consen  286 WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR---KEKYFRRGRLDWPEVSSKGKSKYVF  362 (415)
T ss_pred             cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh---hHhhhhcccccCccccccccchhhh
Confidence            9999999999999999999999999999999999999999955554444331   22222211  11             


Q ss_pred             CCCCCccccCCC---CChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         137 KPKVPWEILYPN---ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       137 ~~~~~~~~~~~~---~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ....++......   ...++.|||++||.+||.+|+|+.|+|.||||+..
T Consensus       363 ~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  363 EPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             cCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence            011122111111   23457899999999999999999999999999764

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=4e-30  Score=229.86  Aligned_cols=165  Identities=39%  Similarity=0.756  Sum_probs=130.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......    .....+||..|+|||++.+ ..++.++||||+||++
T Consensus       145 vHrDlkp~NIl~~-------~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il  212 (359)
T cd07876         145 IHRDLKPSNIVVK-------SDCTLKILDFGLARTACTNF----MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  212 (359)
T ss_pred             ccCCCCHHHEEEC-------CCCCEEEecCCCccccccCc----cCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHH
Confidence            7999999999999       89999999999998653321    1345688999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCC------------CCChhH
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP------------NADPNA  153 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~s~~~  153 (308)
                      |+|++|+.||.+.+..+++..+...++.|....+..... ....+....+......+...++            ..+..+
T Consensus       213 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (359)
T cd07876         213 GELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP-TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQA  291 (359)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH-HHHHHHhhCCCCCCcchhhhccccccccccccccccchhH
Confidence            999999999999999999999999999888766554332 2333443333333333322221            246789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ++||.+||+.||++|||+.|+|+||||..+
T Consensus       292 ~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  321 (359)
T cd07876         292 RDLLSKMLVIDPDKRISVDEALRHPYITVW  321 (359)
T ss_pred             HHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence            999999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=5.7e-30  Score=227.65  Aligned_cols=165  Identities=48%  Similarity=0.820  Sum_probs=140.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.....      .....||.+|+|||++.+...++.++|+||+||++
T Consensus       142 vH~dlkp~NIll~-------~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il  208 (345)
T cd07877         142 IHRDLKPSNLAVN-------EDCELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM  208 (345)
T ss_pred             eecCCChHHEEEc-------CCCCEEEeccccccccccc------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999999865322      23457899999999987655688999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+....+..+....+.+.+..+..+.......+...++..+...+.......++++.+||.+||+.||
T Consensus       209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  288 (345)
T cd07877         209 AELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDS  288 (345)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCCh
Confidence            99999999999988888888888888988888877776666666666666666666665566788999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|+|+.++++||||..+
T Consensus       289 ~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         289 DKRITAAQALAHAYFAQY  306 (345)
T ss_pred             hhcCCHHHHhcChhhhhc
Confidence            999999999999999654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=1.5e-30  Score=228.64  Aligned_cols=172  Identities=33%  Similarity=0.549  Sum_probs=124.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.   ..+.++.+||+|||+|+...............+||+.|+|||++.+...++.++||||+||++
T Consensus       130 vHrDlkp~Nil~~~---~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  206 (317)
T cd07868         130 LHRDLKPANILVMG---EGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF  206 (317)
T ss_pred             EcCCCCHHHEEEec---CCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHH
Confidence            69999999999941   111567899999999987654332222245678999999999987766689999999999999


Q ss_pred             HHHhhCCCCCCCCCH---------HHHHHHHHHhhCCCChhhHhhhhhHHH-----HHHhhcCCCCC--CCCccccCCCC
Q psy7274          86 AEMISNRPIFPGKHY---------LDQLNHILGILGSPTPEDLSCIINEKA-----RSYLQSLPFKP--KVPWEILYPNA  149 (308)
Q Consensus        86 ~ell~g~~pf~~~~~---------~~~l~~i~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~  149 (308)
                      ++|++|++||.+...         .+++..+...+|.|....+........     ..+........  ...+.......
T Consensus       207 ~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (317)
T cd07868         207 AELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP  286 (317)
T ss_pred             HHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCC
Confidence            999999999976442         467888899999988877765432110     01100000000  00011112234


Q ss_pred             ChhHHHHHHHhcccCCCCCCCHHHHhcCCcc
Q psy7274         150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       150 s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f  180 (308)
                      +..+.+||.+||++||.+|+|++|+|+||||
T Consensus       287 ~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         287 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             ChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            6789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=6.7e-30  Score=228.10  Aligned_cols=165  Identities=39%  Similarity=0.749  Sum_probs=129.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......    .....+||..|+|||++.+ ..++.++||||+||++
T Consensus       141 vHrDikp~Nill~-------~~~~~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il  208 (355)
T cd07874         141 IHRDLKPSNIVVK-------SDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  208 (355)
T ss_pred             ccCCCChHHEEEC-------CCCCEEEeeCcccccCCCcc----ccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHH
Confidence            7999999999998       89999999999998654321    1345689999999999864 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccc------------cCCCCChhH
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI------------LYPNADPNA  153 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~s~~~  153 (308)
                      ++|++|+.||.+.+..+.+..+...++.+.++.+.... .....+....+......+..            .....+.++
T Consensus       209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (355)
T cd07874         209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA  287 (355)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhc-HHHHHHHhcCCccccccchhhccccccccccccccccchHH
Confidence            99999999999999999999999999998887665542 22333433333221111111            112245678


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ++||.+||..||.+|||+.|+|+||||..+
T Consensus       288 ~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         288 RDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             HHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence            999999999999999999999999999654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.1e-30  Score=228.32  Aligned_cols=166  Identities=45%  Similarity=0.848  Sum_probs=139.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.....      .....+|..|+|||++.+...++.++|+||+||+
T Consensus       138 i~H~dlkp~NIll~-------~~~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi  204 (342)
T cd07879         138 IIHRDLKPGNLAVN-------EDCELKILDFGLARHADAE------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI  204 (342)
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEeeCCCCcCCCCC------CCCceeeecccChhhhcCccccCchHHHHHHHHH
Confidence            37999999999999       8899999999999865321      2345789999999998764558899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||++|+.||.+.+....+..+....|.+.+.............+....+..+...+...++..+..+.+||.+||+.|
T Consensus       205 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  284 (342)
T cd07879         205 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD  284 (342)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC
Confidence            99999999999999988889999998898888877766555555555555555555556666778899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||+++++.||||+..
T Consensus       285 P~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         285 VDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             hhhCcCHHHHhcCcchhhc
Confidence            9999999999999999664

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=1.5e-30  Score=240.36  Aligned_cols=174  Identities=27%  Similarity=0.394  Sum_probs=122.9

Q ss_pred             CCCCCCCCCCcccCcccccc---------CCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCch
Q psy7274           5 NPHKRIGVEGALAHPYLEQY---------YDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS   75 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~---------~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~   75 (308)
                      -.||||||+|||++.....+         ...+.+||+|||++......      .+..+||+.|+|||++.+ ..|+.+
T Consensus       253 IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~------~~~~~gt~~Y~APE~~~~-~~~~~~  325 (467)
T PTZ00284        253 LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS------RTAIVSTRHYRSPEVVLG-LGWMYS  325 (467)
T ss_pred             eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccc------cccccCCccccCcHHhhc-CCCCcH
Confidence            37999999999997211000         01235999999988643221      245689999999999875 559999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCC----CCCCcccc------
Q psy7274          76 IDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFK----PKVPWEIL------  145 (308)
Q Consensus        76 ~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------  145 (308)
                      +||||+||++|||++|+.||.+.+..+++..+...+|.++..............+.......    ....+..+      
T Consensus       326 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (467)
T PTZ00284        326 TDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPV  405 (467)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccch
Confidence            99999999999999999999999999999999999998766544322222222222111110    00000000      


Q ss_pred             -CCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccccC
Q psy7274         146 -YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       146 -~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~  185 (308)
                       ....++.+.|||.+||++||.+|+|++|+|+||||..+..
T Consensus       406 ~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        406 REVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             hhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence             0012467889999999999999999999999999987533

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=7.2e-30  Score=225.41  Aligned_cols=200  Identities=48%  Similarity=0.884  Sum_probs=167.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.....      ....+++..|+|||++.+...++.++|+||+||+
T Consensus       129 iiH~dl~p~Nili~-------~~~~~~l~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  195 (328)
T cd07856         129 VVHRDLKPSNILIN-------ENCDLKICDFGLARIQDPQ------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCI  195 (328)
T ss_pred             cccCCCCHHHEeEC-------CCCCEEeCccccccccCCC------cCCCcccccccCceeeeccCCcCcHHHHHHHHHH
Confidence            36999999999998       8899999999999854321      2345788899999987654568999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+++|.+.........+.+.+|.++.+........+...+....+.....+.....+..+..+.++|.+||+.+
T Consensus       196 l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  275 (328)
T cd07856         196 FAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFD  275 (328)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCC
Confidence            99999999999999988888888999999988877766666666666666655566666666778899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFN  244 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  244 (308)
                      |.+|||+++++.||||..                                                              
T Consensus       276 P~~R~t~~ell~~~~~~~--------------------------------------------------------------  293 (328)
T cd07856         276 PQKRISAAEALAHPYLAP--------------------------------------------------------------  293 (328)
T ss_pred             hhhCCCHHHHhcCCcccc--------------------------------------------------------------
Confidence            999999999999999954                                                              


Q ss_pred             CCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHH
Q psy7274         245 PHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEE  297 (308)
Q Consensus       245 p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  297 (308)
                                        +++|..+|.+.+.|+++++..++.++.|+-++|.|
T Consensus       294 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (328)
T cd07856         294 ------------------YHDPTDEPVAEEKFDWSFNDADLPVDTWKVMMYSE  328 (328)
T ss_pred             ------------------ccCCccccCchhhcCCchhcccCCHHHHHHHhcCC
Confidence                              34555556666789999998999999999998865

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0591|consensus

Probab=99.97  E-value=8.4e-31  Score=213.57  Aligned_cols=126  Identities=27%  Similarity=0.462  Sum_probs=108.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||.||+|+       .+|.+||+|||+++.+...   ..+.+++|||++||+||++.+ .+|+.++||||+||++
T Consensus       150 mHRDIKPaNIFl~-------~~gvvKLGDfGL~r~l~s~---~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCll  218 (375)
T KOG0591|consen  150 MHRDIKPANIFLT-------ANGVVKLGDFGLGRFLSSK---TTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLL  218 (375)
T ss_pred             eeccCcchheEEc-------CCCceeeccchhHhHhcch---hHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHH
Confidence            5999999999999       9999999999999998764   334678999999999999875 6699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||+.-++||.|++..+.-.+|.+.--.|.|..                             ..|.++..+|..|+..||
T Consensus       219 yEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~-----------------------------~YS~~l~~li~~ci~vd~  269 (375)
T KOG0591|consen  219 YEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDE-----------------------------HYSTDLRELINMCIAVDP  269 (375)
T ss_pred             HHHHhcCCCcccccHHHHHHHHHcCCCCCCcHH-----------------------------HhhhHHHHHHHHHccCCc
Confidence            999999999999988888888876533333321                             246889999999999999


Q ss_pred             CCCCCH
Q psy7274         166 HKRIGV  171 (308)
Q Consensus       166 ~~R~t~  171 (308)
                      ..||+.
T Consensus       270 ~~RP~t  275 (375)
T KOG0591|consen  270 EQRPDT  275 (375)
T ss_pred             ccCCCc
Confidence            999985

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=2.3e-30  Score=224.50  Aligned_cols=159  Identities=40%  Similarity=0.683  Sum_probs=129.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......    ......||..|+|||++.+ ..++.++||||+||++
T Consensus       132 iH~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il  199 (290)
T cd07862         132 VHRDLKPQNILVT-------SSGQIKLADFGLARIYSFQM----ALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIF  199 (290)
T ss_pred             eeCCCCHHHEEEc-------CCCCEEEccccceEeccCCc----ccccccccccccChHHHhC-CCCCCccchHHHHHHH
Confidence            6999999999999       88999999999998764321    1345679999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..+....+.+.+..+........    .........++....+.+++.+.+|+.+||+.||
T Consensus       200 ~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  275 (290)
T cd07862         200 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  275 (290)
T ss_pred             HHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccc----hhccCCCCCCHHHHccCCCHHHHHHHHHHhccCc
Confidence            999999999999999999999999988888776653321110    0112233344555667789999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      ++|||+.++|+||||
T Consensus       276 ~~R~s~~~~l~hp~f  290 (290)
T cd07862         276 AKRISAYSALSHPYF  290 (290)
T ss_pred             hhcCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0578|consensus

Probab=99.96  E-value=2.1e-30  Score=229.24  Aligned_cols=138  Identities=26%  Similarity=0.482  Sum_probs=117.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||.+|||++       .+|.+||+|||+|..+......   .++.+||++|||||++. ...|+.++||||||++.
T Consensus       391 iHrDIKSDnILL~-------~~g~vKltDFGFcaqi~~~~~K---R~TmVGTPYWMAPEVvt-rk~YG~KVDIWSLGIMa  459 (550)
T KOG0578|consen  391 IHRDIKSDNILLT-------MDGSVKLTDFGFCAQISEEQSK---RSTMVGTPYWMAPEVVT-RKPYGPKVDIWSLGIMA  459 (550)
T ss_pred             eeeccccceeEec-------cCCcEEEeeeeeeeccccccCc---cccccCCCCccchhhhh-hcccCccccchhhhhHH
Confidence            6999999999999       9999999999999988765433   46779999999999985 46699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      .||+-|.+||-.++....+.+|... |+|....                           ...+|+.+++||.+||+.|+
T Consensus       460 IEMveGEPPYlnE~PlrAlyLIa~n-g~P~lk~---------------------------~~klS~~~kdFL~~cL~~dv  511 (550)
T KOG0578|consen  460 IEMVEGEPPYLNENPLRALYLIATN-GTPKLKN---------------------------PEKLSPELKDFLDRCLVVDV  511 (550)
T ss_pred             HHHhcCCCCccCCChHHHHHHHhhc-CCCCcCC---------------------------ccccCHHHHHHHHHHhhcch
Confidence            9999999999888877777776542 3332211                           23579999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|++|.|+|+||||+.
T Consensus       512 ~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  512 EQRASAKELLEHPFLKM  528 (550)
T ss_pred             hcCCCHHHHhcChhhhh
Confidence            99999999999999954

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=3.2e-29  Score=223.52  Aligned_cols=166  Identities=42%  Similarity=0.744  Sum_probs=128.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.......    .....+|..|+|||++.+ ..++.++||||+||+
T Consensus       139 i~H~dlkp~Nil~~-------~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~  206 (353)
T cd07850         139 IIHRDLKPSNIVVK-------SDCTLKILDFGLARTAGTSFM----MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI  206 (353)
T ss_pred             eeeCCCCHHHEEEC-------CCCCEEEccCccceeCCCCCC----CCCCcccccccCHHHHhC-CCCCCchhhHhHHHH
Confidence            36999999999999       889999999999987643221    234578899999999865 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCC-------------CCCh
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP-------------NADP  151 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~s~  151 (308)
                      +++|++|+.||.+.+...++..+...+|.|....+..+. .....+....+.....++...++             ..+.
T Consensus       207 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (353)
T cd07850         207 MGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQ-PTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKAS  285 (353)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh-hhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchh
Confidence            999999999999999999999999999988776544432 22233333333222222222211             2356


Q ss_pred             hHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       152 ~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .+++||.+||+.||++|||+.|+|.||||+.+
T Consensus       286 ~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~  317 (353)
T cd07850         286 QARDLLSKMLVIDPEKRISVDDALQHPYINVW  317 (353)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence            78999999999999999999999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0583|consensus

Probab=99.96  E-value=4.1e-30  Score=227.86  Aligned_cols=137  Identities=26%  Similarity=0.456  Sum_probs=112.9

Q ss_pred             CCCCCCCCCCcccCccccccCCC-CCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCC-CchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDP-ADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGY-TKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~-~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~~~DiWSlG   82 (308)
                      -.||||||+|||++       .+ +++||+|||++....   .....+.+.|||+.|+|||++.+...| +.++||||+|
T Consensus       141 i~HRDLK~ENilld-------~~~~~~Kl~DFG~s~~~~---~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~G  210 (370)
T KOG0583|consen  141 IVHRDLKPENILLD-------GNEGNLKLSDFGLSAISP---GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLG  210 (370)
T ss_pred             EeeCCCCHHHEEec-------CCCCCEEEeccccccccC---CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhH
Confidence            47999999999999       77 999999999999774   123346888999999999998764415 5899999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCC-ChhHHHHHHHhc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-DPNALDLLGKML  161 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~ll~~~L  161 (308)
                      +++|.|++|+.||...+....+..|...--                               .+...+ |+++.+|+++||
T Consensus       211 ViLy~ml~G~~PF~d~~~~~l~~ki~~~~~-------------------------------~~p~~~~S~~~~~Li~~mL  259 (370)
T KOG0583|consen  211 VILYVLLCGRLPFDDSNVPNLYRKIRKGEF-------------------------------KIPSYLLSPEARSLIEKML  259 (370)
T ss_pred             HHHHHHHhCCCCCCCccHHHHHHHHhcCCc-------------------------------cCCCCcCCHHHHHHHHHHc
Confidence            999999999999998776666666442100                               011234 899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ..||.+|+|+.+++.||||+.
T Consensus       260 ~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  260 VPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CCCcccCCCHHHHhhChhhcc
Confidence            999999999999999999986

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=1.2e-29  Score=222.17  Aligned_cols=168  Identities=33%  Similarity=0.620  Sum_probs=133.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....++|..|+|||++.+...++.++||||+||++
T Consensus       126 vH~dlkp~Nill~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  195 (309)
T cd07872         126 LHRDLKPQNLLIN-------ERGELKLADFGLARAKSVPTK---TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIF  195 (309)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEECccccceecCCCcc---ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999986543221   123457899999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+..+.+..+...++.+....+..+........ ...+.....++....+.+++++++||.+||+.||
T Consensus       196 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  274 (309)
T cd07872         196 FEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN-YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYES  274 (309)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh-hhcCccCCCchhhhccCCCHHHHHHHHHhccCCh
Confidence            999999999999999999999999999999887766543322111 1122222223333456688999999999999999


Q ss_pred             CCCCCHHHHhcCCcccccc
Q psy7274         166 HKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~  184 (308)
                      .+|+|++|+++||||+...
T Consensus       275 ~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         275 KKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hhCCCHHHHhcChhhhhcc
Confidence            9999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=4.1e-29  Score=221.97  Aligned_cols=165  Identities=44%  Similarity=0.803  Sum_probs=136.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++......      .....++..|+|||++.+...++.++|+||+||++
T Consensus       140 ~H~dlkp~Nill~-------~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll  206 (343)
T cd07880         140 IHRDLKPGNLAVN-------EDCELKILDFGLARQTDSE------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIM  206 (343)
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEeecccccccccC------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            6999999999998       8899999999999865432      23457789999999987545588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +++++|+.||.+.+....+..+....+.++......+.......+...++......+....+..+..+.++|.+||..||
T Consensus       207 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  286 (343)
T cd07880         207 AEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDA  286 (343)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCCh
Confidence            99999999999988888888888887777776666655555666666665554444555567789999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||+.+++.||||+..
T Consensus       287 ~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         287 ESRITAAEALAHPYFEEF  304 (343)
T ss_pred             hhCCCHHHHhcCccHhhh
Confidence            999999999999999653

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=1.6e-29  Score=220.79  Aligned_cols=166  Identities=29%  Similarity=0.546  Sum_probs=121.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......   ......+||..|+|||++.+...++.++||||+||++
T Consensus       125 vH~dlkp~Nill~-------~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  194 (303)
T cd07869         125 LHRDLKPQNLLIS-------DTGELKLADFGLARAKSVPS---HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIF  194 (303)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEECCCCcceeccCCC---ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHH
Confidence            6999999999998       88999999999997643221   1134567899999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCC-CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhh-cCCCCCCCCccccC--CCCChhHHHHHHHhc
Q psy7274          86 AEMISNRPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQ-SLPFKPKVPWEILY--PNADPNALDLLGKML  161 (308)
Q Consensus        86 ~ell~g~~pf~~~-~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~s~~~~~ll~~~L  161 (308)
                      ++|++|..||.+. +..+++..+...++.+....+.......  .+.. .........+...+  ...+..+.+||.+||
T Consensus       195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL  272 (303)
T cd07869         195 VEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP--HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLL  272 (303)
T ss_pred             HHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc--ccccccccccCCccHHHHhhccCCChHHHHHHHHHh
Confidence            9999999999875 4456777888888887766554332110  0000 00000000111111  124578999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      +.||++|+|++++++||||+..
T Consensus       273 ~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         273 QCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             ccCchhccCHHHHhcCcccccC
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=2.6e-29  Score=217.63  Aligned_cols=164  Identities=35%  Similarity=0.604  Sum_probs=122.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+|+........  .....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       122 ~H~dlkp~Nill~-------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil  191 (287)
T cd07848         122 VHRDIKPENLLIS-------HNDVLKLCDFGFARNLSEGSNA--NYTEYVATRWYRSPELLLG-APYGKAVDMWSVGCIL  191 (287)
T ss_pred             ecCCCCHHHEEEc-------CCCcEEEeeccCcccccccccc--cccccccccccCCcHHHcC-CCCCCchhHHhHHHHH
Confidence            6999999999999       8899999999999876432211  1344679999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC--CCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF--KPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      |+|++|++||++.+..+.+..+....+..+...+........... ...+.  .............+.++.+||.+||+.
T Consensus       192 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~  270 (287)
T cd07848         192 GELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG-LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKL  270 (287)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc-cccCcccCcccHHHhhhcccCHHHHHHHHHHccC
Confidence            999999999999988888888888777766655443221100000 00000  000001112234688999999999999


Q ss_pred             CCCCCCCHHHHhcCCcc
Q psy7274         164 NPHKRIGVEDALAHPYL  180 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f  180 (308)
                      ||++|+|++++|+||||
T Consensus       271 ~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         271 NPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=4.5e-29  Score=224.99  Aligned_cols=175  Identities=24%  Similarity=0.268  Sum_probs=120.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......  .......+||+.|+|||++.+ ..++.++||||+||++
T Consensus       204 vHrDiKP~NIll~-------~~~~vkL~DFG~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  273 (391)
T PHA03212        204 IHRDIKAENIFIN-------HPGDVCLGDFGAACFPVDIN--ANKYYGWAGTIATNAPELLAR-DPYGPAVDIWSAGIVL  273 (391)
T ss_pred             ccCCCChHhEEEc-------CCCCEEEEeCCccccccccc--ccccccccCccCCCChhhhcC-CCCCcHHHHHHHHHHH
Confidence            7999999999998       88999999999997543221  111345689999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCC-------CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHH---hhcCCCC-CCCCccccCCCCChhHH
Q psy7274          86 AEMISNRPIFPGK-------HYLDQLNHILGILGSPTPEDLSCIINEKARSY---LQSLPFK-PKVPWEILYPNADPNAL  154 (308)
Q Consensus        86 ~ell~g~~pf~~~-------~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~s~~~~  154 (308)
                      |||++|+.+|.+.       ....++..+....|.++.+........-...+   ....... ...+.......++.++.
T Consensus       274 ~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  353 (391)
T PHA03212        274 FEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLE  353 (391)
T ss_pred             HHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHH
Confidence            9999999776443       24567777888777765432211100000001   1111111 01111111123567899


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCCccccccCCCCCC
Q psy7274         155 DLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP  190 (308)
Q Consensus       155 ~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~~~~  190 (308)
                      +||.+||++||.+||||+|+|+||||+.+..+...|
T Consensus       354 ~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~~~  389 (391)
T PHA03212        354 YLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYPNP  389 (391)
T ss_pred             HHHHHHhcCChhhCCCHHHHhcChhhccCCCCCCCC
Confidence            999999999999999999999999998876554443

>KOG0198|consensus

Probab=99.96  E-value=4.4e-30  Score=219.72  Aligned_cols=142  Identities=27%  Similarity=0.407  Sum_probs=107.7

Q ss_pred             CCCCCCCCCcccCccccccCC-CCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYD-PADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~-~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       . ++.+||+|||+|+................||+.|||||++..+.....++||||+||+
T Consensus       139 vH~DiK~~NiLl~-------~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCt  211 (313)
T KOG0198|consen  139 VHCDIKPANILLD-------PSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCT  211 (313)
T ss_pred             eccCcccceEEEe-------CCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCE
Confidence            5999999999999       6 7999999999999776422222224567999999999999753323359999999999


Q ss_pred             HHHHhhCCCCCCCC-CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~-~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +.||+||++||... .....+..+..   ..                        ..  ..+...++.++.+||.+|+..
T Consensus       212 VvEM~Tg~~PW~~~~~~~~~~~~ig~---~~------------------------~~--P~ip~~ls~~a~~Fl~~C~~~  262 (313)
T KOG0198|consen  212 VVEMLTGKPPWSEFFEEAEALLLIGR---ED------------------------SL--PEIPDSLSDEAKDFLRKCFKR  262 (313)
T ss_pred             EEeccCCCCcchhhcchHHHHHHHhc---cC------------------------CC--CCCCcccCHHHHHHHHHHhhc
Confidence            99999999999763 22222222211   00                        00  122345789999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+||||+++|.|||.+..
T Consensus       263 ~p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  263 DPEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             CcccCcCHHHHhhChhhhcc
Confidence            99999999999999999764

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.96  E-value=3.8e-29  Score=216.65  Aligned_cols=159  Identities=37%  Similarity=0.674  Sum_probs=126.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......    .+..+||..|+|||++.+ ..++.++||||+||++
T Consensus       130 vH~dikp~Nili~-------~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l  197 (288)
T cd07863         130 VHRDLKPENILVT-------SGGQVKLADFGLARIYSCQMA----LTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIF  197 (288)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEECccCccccccCccc----CCCccccccccCchHhhC-CCCCCcchhhhHHHHH
Confidence            6999999999999       889999999999987643221    244578999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+++|.+....+.+..+....+.+....+........    .........++....+.++..+.+||.+||+.||
T Consensus       198 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  273 (288)
T cd07863         198 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR----GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNP  273 (288)
T ss_pred             HHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc----cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCc
Confidence            999999999999998899999998888877665543211100    0111122333445556788999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+.+++.||||
T Consensus       274 ~~R~t~~~~l~hp~f  288 (288)
T cd07863         274 HKRISAFRALQHPFF  288 (288)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=4.4e-29  Score=219.25  Aligned_cols=172  Identities=33%  Similarity=0.549  Sum_probs=121.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||+..   ....++.+||+|||+|+...............+||..|+|||++.+...++.++||||+||++
T Consensus       130 vH~Dlkp~Nil~~~---~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il  206 (317)
T cd07867         130 LHRDLKPANILVMG---EGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF  206 (317)
T ss_pred             EcCCCCHHHEEEcc---CCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHH
Confidence            69999999999941   111668899999999987654332222235568899999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCC---------HHHHHHHHHHhhCCCChhhHhhhhhHHH-HHHhhcC--CCCCCC----CccccCCCC
Q psy7274          86 AEMISNRPIFPGKH---------YLDQLNHILGILGSPTPEDLSCIINEKA-RSYLQSL--PFKPKV----PWEILYPNA  149 (308)
Q Consensus        86 ~ell~g~~pf~~~~---------~~~~l~~i~~~~~~p~~~~~~~~~~~~~-~~~~~~~--~~~~~~----~~~~~~~~~  149 (308)
                      +||++|++||.+..         ...++..+...+|.+....+........ .......  ......    .........
T Consensus       207 ~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (317)
T cd07867         207 AELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKP  286 (317)
T ss_pred             HHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCC
Confidence            99999999997543         2456777888888887777654321100 0000000  000000    001111234


Q ss_pred             ChhHHHHHHHhcccCCCCCCCHHHHhcCCcc
Q psy7274         150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       150 s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f  180 (308)
                      +..+.+||.+||+.||.+|||++|+|+||||
T Consensus       287 ~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         287 DSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             ChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            6779999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0604|consensus

Probab=99.96  E-value=1.9e-29  Score=207.31  Aligned_cols=151  Identities=28%  Similarity=0.449  Sum_probs=116.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|+|..    ....++.+||+|||+|+.....    ..+.+.|.|++|.|||++ +...|+..+|+||+||++
T Consensus       183 AHRDlKpENLLyt----~t~~na~lKLtDfGFAK~t~~~----~~L~TPc~TPyYvaPevl-g~eKydkscdmwSlgVim  253 (400)
T KOG0604|consen  183 AHRDLKPENLLYT----TTSPNAPLKLTDFGFAKETQEP----GDLMTPCFTPYYVAPEVL-GPEKYDKSCDMWSLGVIM  253 (400)
T ss_pred             hhccCChhheeee----cCCCCcceEecccccccccCCC----ccccCCcccccccCHHHh-CchhcCCCCCccchhHHH
Confidence            6999999999976    2336788999999999976532    226778999999999997 456699999999999999


Q ss_pred             HHHhhCCCCCCCCCHH----HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          86 AEMISNRPIFPGKHYL----DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~----~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |-|++|.+||......    ..-.+|.......+...|.                           .+|++++|+|+++|
T Consensus       254 YIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs---------------------------~VSe~aKdlIR~LL  306 (400)
T KOG0604|consen  254 YILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWS---------------------------CVSEAAKDLIRKLL  306 (400)
T ss_pred             HHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHh---------------------------HHHHHHHHHHHHHh
Confidence            9999999999765421    1222333322223333333                           45899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccccCCCCCCch
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQYYDPADEPVS  192 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~~~~~~~~~~  192 (308)
                      ..+|.+|+|+++++.|||+.+....-..+.+
T Consensus       307 kt~PteRlTI~~~m~hpwi~~~~~vp~tpl~  337 (400)
T KOG0604|consen  307 KTEPTERLTIEEVMDHPWINQYEAVPQTPLS  337 (400)
T ss_pred             cCCchhheeHHHhhcCchhcccccCCCCCch
Confidence            9999999999999999999887655555543

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.96  E-value=2.8e-28  Score=216.11  Aligned_cols=172  Identities=46%  Similarity=0.850  Sum_probs=139.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC--CCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH--TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      -.||||||+||+++       .++.+||+|||+++........  ......++||.+|+|||++.+...++.++|+||+|
T Consensus       128 i~H~dl~p~nill~-------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG  200 (337)
T cd07852         128 VIHRDLKPSNILLN-------SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVG  200 (337)
T ss_pred             eecCCCCHHHEEEc-------CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHH
Confidence            37999999999999       8999999999999866433211  11234568999999999886656688999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|+.||.+....+....+....+.+..+.+..+........................+..+.++.++|.+||+
T Consensus       201 ~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  280 (337)
T cd07852         201 CILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLV  280 (337)
T ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhcc
Confidence            99999999999999999999999999998988887776655444444444444444455556667789999999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .||++|||+.++++||||+..
T Consensus       281 ~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         281 FNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             CCcccccCHHHHhhChhhhhh
Confidence            999999999999999999764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0690|consensus

Probab=99.96  E-value=4.3e-29  Score=207.49  Aligned_cols=168  Identities=24%  Similarity=0.417  Sum_probs=136.9

Q ss_pred             CCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHH
Q psy7274           7 HKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA   86 (308)
Q Consensus         7 HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~   86 (308)
                      -||||.+|+|+|       ++|++||+|||+++.--..   ...+.++|||+.|.|||++- ...|+.++|+|.+|+++|
T Consensus       291 YRDlKLENLlLD-------kDGHIKitDFGLCKE~I~~---g~t~kTFCGTPEYLAPEVle-DnDYgraVDWWG~GVVMY  359 (516)
T KOG0690|consen  291 YRDLKLENLLLD-------KDGHIKITDFGLCKEEIKY---GDTTKTFCGTPEYLAPEVLE-DNDYGRAVDWWGVGVVMY  359 (516)
T ss_pred             eeechhhhheec-------cCCceEeeecccchhcccc---cceeccccCChhhcCchhhc-cccccceeehhhhhHHHH
Confidence            489999999999       9999999999999864322   23367899999999999985 466999999999999999


Q ss_pred             HHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCC
Q psy7274          87 EMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPH  166 (308)
Q Consensus        87 ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~  166 (308)
                      ||++|+.||...++...+..|.-.-                               -.+...++++++.||.++|..||.
T Consensus       360 EMmCGRLPFyn~dh~kLFeLIl~ed-------------------------------~kFPr~ls~eAktLLsGLL~kdP~  408 (516)
T KOG0690|consen  360 EMMCGRLPFYNKDHEKLFELILMED-------------------------------LKFPRTLSPEAKTLLSGLLKKDPK  408 (516)
T ss_pred             HHHhccCcccccchhHHHHHHHhhh-------------------------------ccCCccCCHHHHHHHHHHhhcChH
Confidence            9999999999998887777765210                               011235789999999999999999


Q ss_pred             CCCC-----HHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCC
Q psy7274         167 KRIG-----VEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  226 (308)
Q Consensus       167 ~R~t-----~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~  226 (308)
                      +|++     |.||.+|+||..        ++|.....+  +..|+..+.+....++.||+..+..
T Consensus       409 kRLGgGpdDakEi~~h~FF~~--------v~W~~~~~K--ki~PPfKPqVtSetDTryFD~EFT~  463 (516)
T KOG0690|consen  409 KRLGGGPDDAKEIMRHRFFAS--------VDWEATYRK--KIEPPFKPQVTSETDTRYFDEEFTS  463 (516)
T ss_pred             hhcCCCchhHHHHHhhhhhcc--------CCHHHHHHh--ccCCCCCCCcccccchhhhhhhhhc
Confidence            9996     789999999976        556555444  3567777888889999999876553

>KOG0597|consensus

Probab=99.96  E-value=2.3e-29  Score=222.31  Aligned_cols=143  Identities=29%  Similarity=0.513  Sum_probs=118.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||+||.|||++       +.|++|+||||+|+.....   ....+...||+.|||||++. +..|+..+|+||+|||+
T Consensus       122 lhrd~kPqniLl~-------~~~~~KlcdFg~Ar~m~~~---t~vltsikGtPlYmAPElv~-e~pyd~~sDlWslGcil  190 (808)
T KOG0597|consen  122 LHRDMKPQNILLE-------KGGTLKLCDFGLARAMSTN---TSVLTSIKGTPLYMAPELVE-EQPYDHTSDLWSLGCIL  190 (808)
T ss_pred             ccccCCcceeeec-------CCCceeechhhhhhhcccC---ceeeeeccCcccccCHHHHc-CCCccchhhHHHHHHHH
Confidence            6999999999999       9999999999999988654   33367788999999999986 56799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ||+++|++||...+-......|..-.-.|                               .+.+|..+++||.++|..||
T Consensus       191 YE~~~G~PPF~a~si~~Lv~~I~~d~v~~-------------------------------p~~~S~~f~nfl~gLL~kdP  239 (808)
T KOG0597|consen  191 YELYVGQPPFYARSITQLVKSILKDPVKP-------------------------------PSTASSSFVNFLQGLLIKDP  239 (808)
T ss_pred             HHHhcCCCCchHHHHHHHHHHHhcCCCCC-------------------------------cccccHHHHHHHHHHhhcCh
Confidence            99999999998776555555554211111                               12578999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEP  190 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~  190 (308)
                      .+|+|..+++.|||.+....-.+.+
T Consensus       240 ~~RltW~~Ll~HpF~k~~~~~~~~~  264 (808)
T KOG0597|consen  240 AQRLTWTDLLGHPFWKGKINIAELP  264 (808)
T ss_pred             hhcccHHHHhcChHHhhhhhhhccc
Confidence            9999999999999998754443333

>KOG0670|consensus

Probab=99.96  E-value=7.9e-30  Score=223.14  Aligned_cols=167  Identities=34%  Similarity=0.544  Sum_probs=126.7

Q ss_pred             ccCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           3 MFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         3 ~~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      |.-.|.||||+|||++.      +...+||||||.|.......     .+.|..++.|+|||+++| ..|++..|+||+|
T Consensus       555 c~vlHaDIKPDNiLVNE------~k~iLKLCDfGSA~~~~ene-----itPYLVSRFYRaPEIiLG-~~yd~~iD~WSvg  622 (752)
T KOG0670|consen  555 CGVLHADIKPDNILVNE------SKNILKLCDFGSASFASENE-----ITPYLVSRFYRAPEIILG-LPYDYPIDTWSVG  622 (752)
T ss_pred             cCeeecccCccceEecc------CcceeeeccCcccccccccc-----ccHHHHHHhccCcceeec-CcccCCccceeec
Confidence            34579999999999983      66789999999998765432     678899999999999986 5699999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC--------------------CCCCCc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF--------------------KPKVPW  142 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~  142 (308)
                      |+||||+||+.+|+|.+..+.+...+.+-|..+...+..-.- ....|...+..                    ++...+
T Consensus       623 ctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF-~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl  701 (752)
T KOG0670|consen  623 CTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQF-KDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDL  701 (752)
T ss_pred             eeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcch-hhhhcccccceEEEeccccccceeEEEecccCcchhH
Confidence            999999999999999999999999999988877655543211 11111111110                    010111


Q ss_pred             ccc----------CCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         143 EIL----------YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       143 ~~~----------~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ...          .+..-..+++||.+||.+||++|+|+.++|+||||+.
T Consensus       702 ~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  702 GSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            000          0112346889999999999999999999999999963

>KOG0612|consensus

Probab=99.95  E-value=7.3e-29  Score=233.82  Aligned_cols=168  Identities=23%  Similarity=0.365  Sum_probs=140.9

Q ss_pred             ccCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC---C-CCCCchhhH
Q psy7274           3 MFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN---S-KGYTKSIDI   78 (308)
Q Consensus         3 ~~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~-~~~~~~~Di   78 (308)
                      |.-.||||||+|||||       ..|+|||+|||.|-.+..++.-.  ....||||-|.+||++..   + ..|+..+|+
T Consensus       194 mgyVHRDiKPDNvLld-------~~GHikLADFGsClkm~~dG~V~--s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDw  264 (1317)
T KOG0612|consen  194 MGYVHRDIKPDNVLLD-------KSGHIKLADFGSCLKMDADGTVR--SSVAVGTPDYISPEVLQSQGDGKGEYGRECDW  264 (1317)
T ss_pred             ccceeccCCcceeEec-------ccCcEeeccchhHHhcCCCCcEE--eccccCCCCccCHHHHHhhcCCccccCCccch
Confidence            3558999999999999       99999999999998887543222  356799999999999852   2 348999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHh---hCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          79 WSVGCILAEMISNRPIFPGKHYLDQLNHILGI---LGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        79 WSlG~il~ell~g~~pf~~~~~~~~l~~i~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      ||+||++|||+.|..||..++-.+.+.+|++.   ++.|.                              ...+|+++++
T Consensus       265 WSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~------------------------------~~~VSeeakd  314 (1317)
T KOG0612|consen  265 WSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD------------------------------ETDVSEEAKD  314 (1317)
T ss_pred             hhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc------------------------------ccccCHHHHH
Confidence            99999999999999999999999999988753   22220                              1247899999


Q ss_pred             HHHHhcccCCCCCCC---HHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCcccccccccccccccc
Q psy7274         156 LLGKMLTFNPHKRIG---VEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  222 (308)
Q Consensus       156 ll~~~L~~dP~~R~t---~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  222 (308)
                      ||.++++- |..|++   ++++..||||.++            .|+.+....|+.-+.+++..|+.+|+.
T Consensus       315 LI~~ll~~-~e~RLgrngiedik~HpFF~g~------------~W~~iR~~~pP~vPevssd~DTsnFd~  371 (1317)
T KOG0612|consen  315 LIEALLCD-REVRLGRNGIEDIKNHPFFEGI------------DWDNIRESVPPVVPEVSSDDDTSNFDV  371 (1317)
T ss_pred             HHHHHhcC-hhhhcccccHHHHHhCccccCC------------ChhhhhhcCCCCCCcCCCCCccccccc
Confidence            99998864 889998   9999999999875            567888889999999999999999943

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=2.1e-28  Score=213.49  Aligned_cols=167  Identities=35%  Similarity=0.632  Sum_probs=129.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||++........   ......++..|+|||++.+...++.++||||+||++
T Consensus       126 ~H~dlkp~Nil~~-------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l  195 (301)
T cd07873         126 LHRDLKPQNLLIN-------ERGELKLADFGLARAKSIPTK---TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF  195 (301)
T ss_pred             eCCCCCHHHEEEC-------CCCcEEECcCcchhccCCCCC---cccccceeecccCcHHHhCCCCCccHHHHHHHHHHH
Confidence            6999999999999       889999999999976543211   123456789999999987666688999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+..+++..+...++.+....+.......... ....+...........+.+++.+.+||.+||+.||
T Consensus       196 ~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp  274 (301)
T cd07873         196 YEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK-SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEG  274 (301)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc-ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999988877766443221100 00111111111223345678899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|+|++|+++||||+..
T Consensus       275 ~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         275 RKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             ccCcCHHHHhcCcccccc
Confidence            999999999999999765

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0986|consensus

Probab=99.95  E-value=9.3e-29  Score=213.31  Aligned_cols=151  Identities=27%  Similarity=0.353  Sum_probs=117.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      +-|||||+|||+|       ..|+++|+|+|+|..+.....    .+..+||.+|||||++.+.. |+.++|+||+||++
T Consensus       309 VYRDLKPeNILLD-------d~GhvRISDLGLAvei~~g~~----~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCll  376 (591)
T KOG0986|consen  309 VYRDLKPENILLD-------DHGHVRISDLGLAVEIPEGKP----IRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLL  376 (591)
T ss_pred             eeccCChhheeec-------cCCCeEeeccceEEecCCCCc----cccccCcccccCHHHHcCCc-ccCCccHHHHHhHH
Confidence            4599999999999       999999999999998876543    34569999999999997655 99999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||+.|+.||...........+-+..-.                           .-.++....|++++++.+.+|+.||
T Consensus       377 Yemi~G~sPFr~~KeKvk~eEvdrr~~~---------------------------~~~ey~~kFS~eakslc~~LL~Kdp  429 (591)
T KOG0986|consen  377 YEMIAGHSPFRQRKEKVKREEVDRRTLE---------------------------DPEEYSDKFSEEAKSLCEGLLTKDP  429 (591)
T ss_pred             HHHHcccCchhhhhhhhhHHHHHHHHhc---------------------------chhhcccccCHHHHHHHHHHHccCH
Confidence            9999999999765433222222111000                           0012234679999999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccccCCCCCCchhhhhhhhhccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQYYDPADEPVSWRENWGKMLMF  203 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~  203 (308)
                      .+|++     ++++.+||||+.        ++|+..-..++.+
T Consensus       430 ~~RLGcrg~ga~evk~HpfFk~--------lnw~rleagml~P  464 (591)
T KOG0986|consen  430 EKRLGCRGEGAQEVKEHPFFKD--------LNWRRLEAGMLEP  464 (591)
T ss_pred             HHhccCCCcCcchhhhCccccc--------CCHhHHhccCCCC
Confidence            99996     579999999987        5666666666553

>KOG0582|consensus

Probab=99.95  E-value=1.5e-28  Score=211.71  Aligned_cols=154  Identities=19%  Similarity=0.303  Sum_probs=114.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC-CccCcccccccchhhHh-hCCCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG-FLTEYVATRWYRAPEIM-LNSKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~-~~~~~~gt~~y~aPE~l-~~~~~~~~~~DiWSlG   82 (308)
                      -.|||||+.||||+       ++|.|||+|||.+..+........ .+.+.+||++|||||++ .+..+|+.++||||+|
T Consensus       147 ~IHRdvKAgnILi~-------~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfG  219 (516)
T KOG0582|consen  147 HIHRDVKAGNILID-------SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFG  219 (516)
T ss_pred             ceecccccccEEEc-------CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhh
Confidence            46999999999999       999999999998775543322211 12678999999999994 4456799999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++..||.+|..||..-.....+-  ..+-|.|+.-..........                   ...+..++.++..||+
T Consensus       220 ITA~ELA~G~aPf~k~pPmkvLl--~tLqn~pp~~~t~~~~~d~~-------------------k~~~ksf~e~i~~CL~  278 (516)
T KOG0582|consen  220 ITACELAHGHAPFSKYPPMKVLL--LTLQNDPPTLLTSGLDKDED-------------------KKFSKSFREMIALCLV  278 (516)
T ss_pred             HHHHHHhcCCCCcccCChHHHHH--HHhcCCCCCcccccCChHHh-------------------hhhcHHHHHHHHHHhh
Confidence            99999999999997655444332  23334443221111111111                   1346789999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccCC
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .||.+||||+++|+|+||+.....
T Consensus       279 kDP~kRptAskLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  279 KDPSKRPTASKLLKHAFFKKAKSK  302 (516)
T ss_pred             cCcccCCCHHHHhccHHHhhccch
Confidence            999999999999999999886554

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=1.6e-28  Score=216.41  Aligned_cols=137  Identities=21%  Similarity=0.393  Sum_probs=109.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......   ......+||+.|+|||++.+ ..++.++||||+||+
T Consensus       116 ivHrDlkp~NIll~-------~~~~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i  184 (323)
T cd05571         116 VVYRDLKLENLMLD-------KDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV  184 (323)
T ss_pred             eEeCCCCHHHEEEC-------CCCCEEEeeCCCCcccccCC---CcccceecCccccChhhhcC-CCCCccccCcccchh
Confidence            36999999999999       88999999999997543221   11345689999999999864 568999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|+.||.+.+.......+....  .                             .+...+++++.+||.+||+.|
T Consensus       185 l~elltg~~Pf~~~~~~~~~~~~~~~~--~-----------------------------~~p~~~~~~~~~li~~~L~~d  233 (323)
T cd05571         185 MYEMMCGRLPFYNQDHEKLFELILMEE--I-----------------------------RFPRTLSPEAKSLLAGLLKKD  233 (323)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHcCC--C-----------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            999999999998877655444432110  0                             011346789999999999999


Q ss_pred             CCCCC-----CHHHHhcCCccccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~~  183 (308)
                      |++|+     ++.++++||||...
T Consensus       234 P~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         234 PKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             HHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999     89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4717|consensus

Probab=99.95  E-value=2.3e-28  Score=213.91  Aligned_cols=141  Identities=24%  Similarity=0.380  Sum_probs=122.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -+||||||+|+++-      .+-|.|||+|||++..+.++..    +++.||+..|.|||+++|.....+++||||+|||
T Consensus       139 VVHRDLKPENVVFF------EKlGlVKLTDFGFSNkf~PG~k----L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVI  208 (864)
T KOG4717|consen  139 VVHRDLKPENVVFF------EKLGLVKLTDFGFSNKFQPGKK----LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVI  208 (864)
T ss_pred             hhcccCCcceeEEe------eecCceEeeeccccccCCCcch----hhcccchhhccCchhhhcCccCCcchhhhHHHHH
Confidence            47999999999876      2789999999999998876543    6788999999999999987756689999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|-|++|++||+..++.+.+.+|+..-.+.+                               ..+|.+|++||..||+.|
T Consensus       209 LyMLVCGq~PFqeANDSETLTmImDCKYtvP-------------------------------shvS~eCrdLI~sMLvRd  257 (864)
T KOG4717|consen  209 LYMLVCGQPPFQEANDSETLTMIMDCKYTVP-------------------------------SHVSKECRDLIQSMLVRD  257 (864)
T ss_pred             HHHHHhCCCccccccchhhhhhhhcccccCc-------------------------------hhhhHHHHHHHHHHHhcC
Confidence            9999999999999999999999875432221                               246899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~  186 (308)
                      |++|.+.++|..|+|++..-.+
T Consensus       258 PkkRAslEeI~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  258 PKKRASLEEIVSTSWLQAGDRG  279 (864)
T ss_pred             chhhccHHHHhccccccCCCCC
Confidence            9999999999999999876443

>KOG0614|consensus

Probab=99.95  E-value=3e-28  Score=212.79  Aligned_cols=167  Identities=24%  Similarity=0.431  Sum_probs=139.4

Q ss_pred             CCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHH
Q psy7274           7 HKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA   86 (308)
Q Consensus         7 HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~   86 (308)
                      -|||||+|.+++       .+|-+||.|||+|+.+..+..    .-++|||+.|.|||++++ ++.+.++|.||+|+++|
T Consensus       543 YRDLKPENllLd-------~~Gy~KLVDFGFAKki~~g~K----TwTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~  610 (732)
T KOG0614|consen  543 YRDLKPENLLLD-------NRGYLKLVDFGFAKKIGSGRK----TWTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIY  610 (732)
T ss_pred             eccCChhheeec-------cCCceEEeehhhHHHhccCCc----eeeecCCcccccchhhhc-cCcchhhHHHHHHHHHH
Confidence            499999999999       999999999999999876543    356899999999999986 67999999999999999


Q ss_pred             HHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCC
Q psy7274          87 EMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPH  166 (308)
Q Consensus        87 ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~  166 (308)
                      ||++|.+||.|.+....++.|...+..                             -.+...++..+.+|++++...+|.
T Consensus       611 ELL~G~pPFs~~dpmktYn~ILkGid~-----------------------------i~~Pr~I~k~a~~Lik~LCr~~P~  661 (732)
T KOG0614|consen  611 ELLTGSPPFSGVDPMKTYNLILKGIDK-----------------------------IEFPRRITKTATDLIKKLCRDNPT  661 (732)
T ss_pred             HHHcCCCCCCCCchHHHHHHHHhhhhh-----------------------------hhcccccchhHHHHHHHHHhcCcH
Confidence            999999999999999999988754321                             011224678899999999999999


Q ss_pred             CCCC-----HHHHhcCCccccccCCCCCCchhhhhhhhhc--ccCCCccccccccccccccccccCC
Q psy7274         167 KRIG-----VEDALAHPYLEQYYDPADEPVSWRENWGKML--MFNPHKRIGVEGALAHPYLEQYYDP  226 (308)
Q Consensus       167 ~R~t-----~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~  226 (308)
                      +|++     +.+|.+|.||.++            .|..+.  ...|+--..+.+..|+.+|+.+...
T Consensus       662 ERLG~~~~gI~DIkkH~Wf~gf------------dweglr~~~L~pPi~~~va~ptD~s~Fd~~p~d  716 (732)
T KOG0614|consen  662 ERLGYQKGGINDIKKHRWFEGF------------DWEGLRSRTLPPPIIPSVANPTDVSNFDNFPPD  716 (732)
T ss_pred             hhhccccCChHHHHhhhhhhcC------------ChhhhhhccCCCCccccCCCcccchhccCCCcc
Confidence            9997     8899999999875            455443  3456666788899999999887443

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=1.4e-27  Score=206.45  Aligned_cols=163  Identities=33%  Similarity=0.600  Sum_probs=124.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.......   ......++..|+|||++.+...++.++||||+||++
T Consensus       121 ~H~dl~~~nil~~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  190 (284)
T cd07839         121 LHRDLKPQNLLIN-------KNGELKLADFGLARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF  190 (284)
T ss_pred             ecCCCCHHHEEEc-------CCCcEEECccchhhccCCCCC---CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHH
Confidence            6999999999999       889999999999986543221   134457889999999987656689999999999999


Q ss_pred             HHHhhCCCC-CCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPI-FPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~p-f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|..| |.+.+..+.+..+...++.+....+........  +...........+....+..++++.+||.+||..|
T Consensus       191 ~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  268 (284)
T cd07839         191 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD--YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCN  268 (284)
T ss_pred             HHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc--ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCC
Confidence            999998765 677777888888888888877665554322111  10001111222234445678899999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|||++++++||||
T Consensus       269 P~~R~t~~~il~h~~f  284 (284)
T cd07839         269 PVQRISAEEALQHPYF  284 (284)
T ss_pred             hhhcCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0032|consensus

Probab=99.95  E-value=5.2e-28  Score=214.47  Aligned_cols=147  Identities=29%  Similarity=0.429  Sum_probs=118.7

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .-.||||||+|+|+..   ..+.++.+|++|||+|......    ......|||+.|+|||++.. ..|+..+||||+||
T Consensus       155 gvvHrDlKpEN~L~~~---~~~~~~~ik~~DFGla~~~~~~----~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gv  226 (382)
T KOG0032|consen  155 GVVHRDLKPENLLLAS---KDEGSGRIKLIDFGLAKFIKPG----ERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGV  226 (382)
T ss_pred             CceeccCCHHHeeecc---ccCCCCcEEEeeCCCceEccCC----ceEeeecCCccccCchhhcC-CCCCcccchhHHHH
Confidence            4479999999999872   1122468999999999987652    22577899999999999853 66999999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|.|++|.+||.+.+.......|...-....                           ...++.+|..+++|+++||..
T Consensus       227 i~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~---------------------------~~~w~~is~~akd~i~~ll~~  279 (382)
T KOG0032|consen  227 ILYILLSGVPPFWGETEFEIFLAILRGDFDFT---------------------------SEPWDDISESAKDFIRKLLEF  279 (382)
T ss_pred             HHHHHhhCCCCCcCCChhHHHHHHHcCCCCCC---------------------------CCCccccCHHHHHHHHHhccc
Confidence            99999999999999998777776553211111                           123457799999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccC
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~  185 (308)
                      ||.+|+|+.++|+|||++....
T Consensus       280 dp~~R~ta~~~L~HpWi~~~~~  301 (382)
T KOG0032|consen  280 DPRKRLTAAQALQHPWIKSIGE  301 (382)
T ss_pred             CcccCCCHHHHhcCccccCCcc
Confidence            9999999999999999987533

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=1.7e-27  Score=205.96  Aligned_cols=163  Identities=38%  Similarity=0.642  Sum_probs=126.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.......   .......++..|+|||++.+...++.++|+||+||++
T Consensus       123 ~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il  192 (285)
T cd07861         123 LHRDLKPQNLLID-------NKGVIKLADFGLARAFGIPV---RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIF  192 (285)
T ss_pred             eecCCCHHHEEEc-------CCCcEEECcccceeecCCCc---ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHH
Confidence            6999999999999       89999999999998654321   1123447789999999987656688999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+....+.+..+...++.+....+......  ..+....+.............+++++.++|.+||..||
T Consensus       193 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  270 (285)
T cd07861         193 AEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL--PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDP  270 (285)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh--HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCCh
Confidence            9999999999999888888888888887776665543321  12222222222222233345678999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+.+++.||||
T Consensus       271 ~~Rpt~~~ll~~~~~  285 (285)
T cd07861         271 AKRISAKKALNHPYF  285 (285)
T ss_pred             hhCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.95  E-value=2.7e-27  Score=210.26  Aligned_cols=181  Identities=40%  Similarity=0.753  Sum_probs=132.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++.      .++.+||+|||+++.........+.....+|+..|+|||++.+...++.++|+||+||+
T Consensus       135 ivH~dikp~Nili~~------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (342)
T cd07854         135 VLHRDLKPANVFINT------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI  208 (342)
T ss_pred             cccCCCCHHHEEEcC------CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHH
Confidence            369999999999971      45678999999998664332222223344788999999988765668899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+....+......+.+........... ............+.....+..+.++.+||.+||+.|
T Consensus       209 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  287 (342)
T cd07854         209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIP-SFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFN  287 (342)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhh-hhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCC
Confidence            9999999999999888877777776655555444333322111 111111223334445556678899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCCCCCch
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPADEPVS  192 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~~~~~~  192 (308)
                      |.+|||++++++||||+.+..+.+.+++
T Consensus       288 P~~R~t~~ell~h~~~~~~~~~~~~~~~  315 (342)
T cd07854         288 PMDRLTAEEALMHPYMSCYSCPFDEPVS  315 (342)
T ss_pred             chhccCHHHHhCCCccccccCCccccCC
Confidence            9999999999999999887666555543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0983|consensus

Probab=99.95  E-value=6.9e-28  Score=195.96  Aligned_cols=149  Identities=23%  Similarity=0.419  Sum_probs=117.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .|||+||+|||+|       ..|.+|+||||++..+.....+    +...|-+.|||||.+--  ...|+-.+||||+|+
T Consensus       214 iHRDvKPSNILlD-------e~GniKlCDFGIsGrlvdSkAh----trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGI  282 (391)
T KOG0983|consen  214 IHRDVKPSNILLD-------ERGNIKLCDFGISGRLVDSKAH----TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGI  282 (391)
T ss_pred             eecccCccceEEc-------cCCCEEeecccccceeeccccc----ccccCCccccCccccCCCCCCccchhhhhhhhcc
Confidence            5999999999999       9999999999999876554433    34578889999998742  245888999999999


Q ss_pred             HHHHHhhCCCCCCCC-CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISNRPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g~~pf~~~-~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      .++||.||+.||.|. .+.+.+.+|.+-  .|+.                       .+.   -.++|+.+.+|+..||+
T Consensus       283 TlveLaTg~yPy~~c~tdFe~ltkvln~--ePP~-----------------------L~~---~~gFSp~F~~fv~~CL~  334 (391)
T KOG0983|consen  283 TLVELATGQYPYKGCKTDFEVLTKVLNE--EPPL-----------------------LPG---HMGFSPDFQSFVKDCLT  334 (391)
T ss_pred             chhhhhcccCCCCCCCccHHHHHHHHhc--CCCC-----------------------CCc---ccCcCHHHHHHHHHHhh
Confidence            999999999999985 456677766651  1211                       000   01368999999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccCCCCCCchh
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYDPADEPVSW  193 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~~~~~~~~~  193 (308)
                      .|+.+||.-.++|+|||+..+.....+.-+|
T Consensus       335 kd~r~RP~Y~~Ll~h~Fi~~ye~a~~dVa~W  365 (391)
T KOG0983|consen  335 KDHRKRPKYNKLLEHPFIKRYETAEVDVASW  365 (391)
T ss_pred             cCcccCcchHHHhcCcceeecchhhccHHHH
Confidence            9999999999999999998875554444444

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.95  E-value=6.3e-28  Score=213.02  Aligned_cols=135  Identities=21%  Similarity=0.392  Sum_probs=107.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       117 vHrDikp~NIll~-------~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil  185 (328)
T cd05593         117 VYRDLKLENLMLD-------KDGHIKITDFGLCKEGITDA---ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM  185 (328)
T ss_pred             EecccCHHHeEEC-------CCCcEEEecCcCCccCCCcc---cccccccCCcCccChhhhcC-CCCCccCCccccchHH
Confidence            6999999999999       88999999999987543221   11345689999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+.......+....  .                             .+...++.++.+||.+||+.||
T Consensus       186 ~elltG~~Pf~~~~~~~~~~~~~~~~--~-----------------------------~~p~~~~~~~~~li~~~L~~dP  234 (328)
T cd05593         186 YEMMCGRLPFYNQDHEKLFELILMED--I-----------------------------KFPRTLSADAKSLLSGLLIKDP  234 (328)
T ss_pred             HHHhhCCCCCCCCCHHHHHHHhccCC--c-----------------------------cCCCCCCHHHHHHHHHHcCCCH
Confidence            99999999998876655444332100  0                             0112467899999999999999


Q ss_pred             CCCC-----CHHHHhcCCcccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~  182 (308)
                      .+|+     ++.++++||||..
T Consensus       235 ~~R~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         235 NKRLGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCC
Confidence            9997     8999999999965

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0585|consensus

Probab=99.95  E-value=4.1e-28  Score=210.44  Aligned_cols=142  Identities=23%  Similarity=0.332  Sum_probs=116.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC--CCCccCcccccccchhhHhhCCC---CCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH--TGFLTEYVATRWYRAPEIMLNSK---GYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiWS   80 (308)
                      .||||||+|+||+       ++|++||+|||.+.....+...  ...+...+||+.++|||.+.++.   ..+.+.||||
T Consensus       232 iHRDIKPsNLLl~-------~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWa  304 (576)
T KOG0585|consen  232 IHRDIKPSNLLLS-------SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWA  304 (576)
T ss_pred             eccccchhheEEc-------CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhh
Confidence            6999999999999       9999999999999876433211  12345679999999999987632   3568999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||+||.|+.|+.||.+....+...+|++..-..+.                             .+.+.++++|||.+|
T Consensus       305 lGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~-----------------------------~pe~~e~~kDli~~l  355 (576)
T KOG0585|consen  305 LGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPE-----------------------------NPEINEDLKDLIKRL  355 (576)
T ss_pred             hhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCC-----------------------------cccccHHHHHHHHHH
Confidence            999999999999999999999999888753111100                             124578999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |+.||.+|++..++..|||....
T Consensus       356 L~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  356 LEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hhcChhheeehhhheecceeccC
Confidence            99999999999999999999775

>KOG0201|consensus

Probab=99.95  E-value=1.4e-28  Score=211.62  Aligned_cols=137  Identities=25%  Similarity=0.417  Sum_probs=111.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|||||+.|||+.       .+|.+|++|||+|..+......   ..+++||+.|||||++. ..+|+.++||||||++
T Consensus       132 kiHrDIKaanil~s-------~~g~vkl~DfgVa~ql~~~~~r---r~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGIT  200 (467)
T KOG0201|consen  132 KIHRDIKAANILLS-------ESGDVKLADFGVAGQLTNTVKR---RKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGIT  200 (467)
T ss_pred             eecccccccceeEe-------ccCcEEEEecceeeeeechhhc---cccccccccccchhhhc-cccccchhhhhhhhHH
Confidence            36999999999998       8899999999999987654322   26789999999999997 4679999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      .+||++|.+|+........+..|                           +...+..   +....|+.+++|+..||..|
T Consensus       201 aiEla~GePP~s~~hPmrvlflI---------------------------pk~~PP~---L~~~~S~~~kEFV~~CL~k~  250 (467)
T KOG0201|consen  201 AIELAKGEPPHSKLHPMRVLFLI---------------------------PKSAPPR---LDGDFSPPFKEFVEACLDKN  250 (467)
T ss_pred             HHHHhcCCCCCcccCcceEEEec---------------------------cCCCCCc---cccccCHHHHHHHHHHhhcC
Confidence            99999999999776542222111                           1111111   12257899999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |+.||+|.++|+|+|++.
T Consensus       251 P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  251 PEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             cccCcCHHHHhhhHHHHh
Confidence            999999999999999987

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.6e-27  Score=207.05  Aligned_cols=132  Identities=25%  Similarity=0.398  Sum_probs=108.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.....      ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       123 ~H~dlkp~NIli~-------~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il  188 (291)
T cd05612         123 VYRDLKPENILLD-------KEGHIKLTDFGFAKKLRDR------TWTLCGTPEYLAPEVIQS-KGHNKAVDWWALGILI  188 (291)
T ss_pred             eecCCCHHHeEEC-------CCCCEEEEecCcchhccCC------cccccCChhhcCHHHHcC-CCCCchhhHHHHHHHH
Confidence            6999999999998       8899999999999876432      233579999999999864 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+.......+....  +                             .+....+..+++||++||+.||
T Consensus       189 ~~l~~g~~pf~~~~~~~~~~~i~~~~--~-----------------------------~~~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         189 YEMLVGYPPFFDDNPFGIYEKILAGK--L-----------------------------EFPRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCC--c-----------------------------CCCccCCHHHHHHHHHHcCCCH
Confidence            99999999998887666555543210  0                             0112357899999999999999


Q ss_pred             CCCCC-----HHHHhcCCcccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~  182 (308)
                      .+|++     ++++++||||+.
T Consensus       238 ~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         238 TRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HHccCCccCCHHHHhcCccccC
Confidence            99995     999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.95  E-value=1.8e-27  Score=208.35  Aligned_cols=171  Identities=35%  Similarity=0.593  Sum_probs=129.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++........   ..+...++..|+|||++.+...++.++|+||+||+
T Consensus       129 i~H~dl~p~nil~~-------~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~i  198 (309)
T cd07845         129 IIHRDLKVSNLLLT-------DKGCLKIADFGLARTYGLPAK---PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCI  198 (309)
T ss_pred             eecCCCCHHHEEEC-------CCCCEEECccceeeecCCccC---CCCcccccccccChhhhcCCCCcCchHHHHHHHHH
Confidence            37999999999999       889999999999987654321   12334568899999998765668999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|++||.+.+..+++..+...++.+....+........... ...+......+...+...++.+.+||.+||+.|
T Consensus       199 l~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d  277 (309)
T cd07845         199 LAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK-FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYD  277 (309)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccc-ccccCCCCCchHHhccccCHHHHHHHHHHhcCC
Confidence            9999999999999999999999999988887765543321110000 001111111222233456899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~  186 (308)
                      |.+|||++++++||||+....+
T Consensus       278 p~~R~t~~~il~h~~f~~~~~~  299 (309)
T cd07845         278 PKKRATAEEALESSYFKEKPLP  299 (309)
T ss_pred             hhhCcCHHHHhcChhhccCCCC
Confidence            9999999999999999876544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.95  E-value=1.8e-27  Score=209.41  Aligned_cols=136  Identities=25%  Similarity=0.411  Sum_probs=110.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       118 vH~dlkp~NIli~-------~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  186 (320)
T cd05590         118 IYRDLKLDNVLLD-------HEGHCKLADFGMCKEGIFNG---KTTSTFCGTPDYIAPEILQE-MLYGPSVDWWAMGVLL  186 (320)
T ss_pred             EeCCCCHHHeEEC-------CCCcEEEeeCCCCeecCcCC---CcccccccCccccCHHHHcC-CCCCCccchhhhHHHH
Confidence            6999999999999       89999999999987643221   11345689999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.....                               ......+.++.+||++||+.||
T Consensus       187 ~el~~g~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~~~~~~~~~~~li~~~L~~dP  235 (320)
T cd05590         187 YEMLCGHAPFEAENEDDLFEAILNDEV-------------------------------VYPTWLSQDAVDILKAFMTKNP  235 (320)
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHhcCCC-------------------------------CCCCCCCHHHHHHHHHHcccCH
Confidence            999999999998887666555532110                               0112357899999999999999


Q ss_pred             CCCCCH------HHHhcCCccccc
Q psy7274         166 HKRIGV------EDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~------~eil~hp~f~~~  183 (308)
                      .+|+++      +++++||||..+
T Consensus       236 ~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         236 TMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             HHCCCCCCCCCHHHHHcCCCcCCC
Confidence            999998      999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.95  E-value=6.3e-28  Score=208.94  Aligned_cols=139  Identities=26%  Similarity=0.365  Sum_probs=107.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||++........    ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       124 iH~dikp~Nill~-------~~~~~kl~Dfg~~~~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil  191 (285)
T cd05631         124 VYRDLKPENILLD-------DRGHIRISDLGLAVQIPEGET----VRGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLI  191 (285)
T ss_pred             EeCCCCHHHEEEC-------CCCCEEEeeCCCcEEcCCCCe----ecCCCCCCCccCHhhhcC-CCCCcccCchhHHHHH
Confidence            6999999999998       889999999999987543211    244589999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+.......+........                           .......+.++.+||++||..||
T Consensus       192 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~~P  244 (285)
T cd05631         192 YEMIQGQSPFRKRKERVKREEVDRRVKEDQ---------------------------EEYSEKFSEDAKSICRMLLTKNP  244 (285)
T ss_pred             HHHHhCCCCCCCCCcchhHHHHHHHhhccc---------------------------ccCCccCCHHHHHHHHHHhhcCH
Confidence            999999999987654332222221111000                           01123568899999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~  183 (308)
                      .+|+|     ++++++||||...
T Consensus       245 ~~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         245 KERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             HHhcCCCCCCHHHHhcCHhhcCC
Confidence            99997     8999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=2.5e-27  Score=204.87  Aligned_cols=166  Identities=36%  Similarity=0.728  Sum_probs=130.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+||+++       .++.++|+|||++........  .......|+.+|+|||++.+...++.++||||+||++
T Consensus       121 ~H~dl~p~ni~~~-------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l  191 (286)
T cd07832         121 MHRDLKPANLLIS-------ADGVLKIADFGLARLFSEEEP--RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIF  191 (286)
T ss_pred             ecCCcCHHHEEEc-------CCCcEEEeeeeecccccCCCC--CccccccCcccccCceeeeccccCCchhHHHHHHHHH
Confidence            6999999999999       789999999999987654321  1134457899999999987656678999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|.++|.+.+....+..+...++.+.+..+........... ...+.....++....+..+..+.+||.+||..+|
T Consensus       192 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  270 (286)
T cd07832         192 AELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNK-ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDP  270 (286)
T ss_pred             HHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhc-ccCCCCCcchHHHhCCCccHHHHHHHHHHhccCh
Confidence            999999999999999999999999899888766654322111100 1112223334455566778999999999999999


Q ss_pred             CCCCCHHHHhcCCccc
Q psy7274         166 HKRIGVEDALAHPYLE  181 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~  181 (308)
                      .+|||++++++||||.
T Consensus       271 ~~R~~~~~~l~h~~~~  286 (286)
T cd07832         271 SKRLSAAEALRHPYFT  286 (286)
T ss_pred             hhCCCHHHHhhCcCcC
Confidence            9999999999999993

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0596|consensus

Probab=99.94  E-value=8.6e-28  Score=211.85  Aligned_cols=144  Identities=24%  Similarity=0.477  Sum_probs=106.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC----------CCCch
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK----------GYTKS   75 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----------~~~~~   75 (308)
                      .|.||||.|+|+        -.|.+||+|||+|..+..+.... .-.+.+||..||+||.+....          ..+.+
T Consensus       482 VHSDLKPANFLl--------VkG~LKLIDFGIA~aI~~DTTsI-~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~  552 (677)
T KOG0596|consen  482 VHSDLKPANFLL--------VKGRLKLIDFGIANAIQPDTTSI-VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRK  552 (677)
T ss_pred             eecCCCcccEEE--------EeeeEEeeeechhcccCccccce-eeccccCcccccCHHHHhhccccccCCCcceeecCc
Confidence            699999999998        57999999999999886654322 235679999999999985311          15678


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCC--hhH
Q psy7274          76 IDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD--PNA  153 (308)
Q Consensus        76 ~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~  153 (308)
                      +||||+|||+|+|+.|++||..  ...++.++..+.. |.-                      .+.    |+..+  .++
T Consensus       553 SDvWSLGCILYqMvYgktPf~~--~~n~~aKl~aI~~-P~~----------------------~Ie----fp~~~~~~~l  603 (677)
T KOG0596|consen  553 SDVWSLGCILYQMVYGKTPFGQ--IINQIAKLHAITD-PNH----------------------EIE----FPDIPENDEL  603 (677)
T ss_pred             cchhhhhhHHHHHHhcCCchHH--HHHHHHHHHhhcC-CCc----------------------ccc----ccCCCCchHH
Confidence            9999999999999999999942  2334444433221 100                      011    12221  239


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCccccccCCC
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      +++++.||.+||++|||+.++|+|||++.+.-+.
T Consensus       604 i~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~~  637 (677)
T KOG0596|consen  604 IDVMKCCLARDPKKRWSIPELLQHPFLQIQPIPV  637 (677)
T ss_pred             HHHHHHHHhcCcccCCCcHHHhcCcccccccccc
Confidence            9999999999999999999999999997754443

>KOG0668|consensus

Probab=99.94  E-value=1.1e-27  Score=190.15  Aligned_cols=170  Identities=28%  Similarity=0.545  Sum_probs=131.2

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .--|||+||.|++||.      ..-.++|+|+|+|....+....    .-.+.++.|.-||++.....|+.+.|+||+||
T Consensus       152 GImHRDVKPhNvmIdh------~~rkLrlIDWGLAEFYHp~~eY----nVRVASRyfKGPELLVdy~~YDYSLD~WS~Gc  221 (338)
T KOG0668|consen  152 GIMHRDVKPHNVMIDH------ELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGC  221 (338)
T ss_pred             CcccccCCcceeeech------hhceeeeeecchHhhcCCCcee----eeeeehhhcCCchheeechhccccHHHHHHHH
Confidence            3469999999999994      6677999999999988776543    34588999999999988788999999999999


Q ss_pred             HHHHHhhCC-CCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHH-HHHHhhcCCCCCCCCccccCCC-----CChhHHHH
Q psy7274          84 ILAEMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEK-ARSYLQSLPFKPKVPWEILYPN-----ADPNALDL  156 (308)
Q Consensus        84 il~ell~g~-~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~s~~~~~l  156 (308)
                      +++.|+..+ +.|.|.++.+|+-+|..++|+-.....-.-.... ...|..-+....+.+|..+...     ++++++||
T Consensus       222 mlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDl  301 (338)
T KOG0668|consen  222 MLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDL  301 (338)
T ss_pred             HHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHH
Confidence            999999987 5568999999999999999975332221111000 1122222333445555554332     57999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         157 LGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |.++|.+|..+|+||.|++.||||...
T Consensus       302 ldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  302 LDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             HHHHHhhccccccchHHHhcCchHHHH
Confidence            999999999999999999999999654

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=1.6e-27  Score=210.32  Aligned_cols=135  Identities=21%  Similarity=0.396  Sum_probs=108.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       118 vHrDikp~NIll~-------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  186 (325)
T cd05594         118 VYRDLKLENLMLD-------KDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM  186 (325)
T ss_pred             EecCCCCCeEEEC-------CCCCEEEecCCCCeecCCCC---cccccccCCcccCCHHHHcc-CCCCCcccccccccee
Confidence            6999999999999       89999999999987543221   11345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+.......+.....                               .+....++++.+||.+||+.||
T Consensus       187 ~el~tG~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~~~~~~~li~~~L~~dP  235 (325)
T cd05594         187 YEMMCGRLPFYNQDHEKLFELILMEEI-------------------------------RFPRTLSPEAKSLLSGLLKKDP  235 (325)
T ss_pred             eeeccCCCCCCCCCHHHHHHHHhcCCC-------------------------------CCCCCCCHHHHHHHHHHhhcCH
Confidence            999999999988776555444321100                               0112467899999999999999


Q ss_pred             CCCC-----CHHHHhcCCcccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~  182 (308)
                      ++|+     ++.++++||||..
T Consensus       236 ~~R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         236 KQRLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             HHhCCCCCCCHHHHhcCCCcCC
Confidence            9997     8999999999976

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=5.3e-27  Score=212.04  Aligned_cols=168  Identities=23%  Similarity=0.298  Sum_probs=117.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......... .....+||..|+|||++.+ ..++.++||||+||+
T Consensus       206 ivHrDlkp~Nill~-------~~~~~~l~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvi  276 (392)
T PHA03207        206 IIHRDVKTENIFLD-------EPENAVLGDFGAACKLDAHPDTP-QCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLV  276 (392)
T ss_pred             ccccCCCHHHEEEc-------CCCCEEEccCccccccCcccccc-cccccccccCccCHhHhcC-CCCCchhhHHHHHHH
Confidence            37999999999999       88999999999998664432211 1235689999999999864 558999999999999


Q ss_pred             HHHHhhCCCCCCCCC---HHHHHHHHHHhhCCCChhhHhhh---hhHHHHHHhhcCCCCCCCCcccc--CCCCChhHHHH
Q psy7274          85 LAEMISNRPIFPGKH---YLDQLNHILGILGSPTPEDLSCI---INEKARSYLQSLPFKPKVPWEIL--YPNADPNALDL  156 (308)
Q Consensus        85 l~ell~g~~pf~~~~---~~~~l~~i~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~l  156 (308)
                      +|||++|+.||.+..   ...++..+...++..+.+.....   .......+...  ..+.......  ....+.++.+|
T Consensus       277 l~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l  354 (392)
T PHA03207        277 LFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIV--LRPPYTIPPVIRKYGMHMDVEYL  354 (392)
T ss_pred             HHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhccc--ccCCccccchhhccCcchhHHHH
Confidence            999999999997754   35666667766665433221110   00111111111  1111111111  12356789999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         157 LGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |++||+.||.+|||+.++|.||||...
T Consensus       355 i~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        355 IAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             HHHHhccChhhCCCHHHHhhCchhhcc
Confidence            999999999999999999999999653

>KOG0580|consensus

Probab=99.94  E-value=2.9e-27  Score=188.78  Aligned_cols=133  Identities=24%  Similarity=0.397  Sum_probs=115.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|+|++       ..+.+||+|||.+..-..+.     -.+.|||.-|.+||+.. +..++..+|+|++|++.
T Consensus       146 IhRdiKpenlLlg-------~~~~lkiAdfGwsV~~p~~k-----R~tlcgt~dyl~pEmv~-~~~hd~~Vd~w~lgvl~  212 (281)
T KOG0580|consen  146 IHRDIKPENLLLG-------SAGELKIADFGWSVHAPSNK-----RKTLCGTLDYLPPEMVE-GRGHDKFVDLWSLGVLC  212 (281)
T ss_pred             ccCCCCHHHhccC-------CCCCeeccCCCceeecCCCC-----ceeeecccccCCHhhcC-CCCccchhhHHHHHHHH
Confidence            6999999999999       99999999999997654322     35679999999999875 46799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ||++.|.+||...+..+.+.+|...--..                               ...++.++.|||.+||..+|
T Consensus       213 yeflvg~ppFes~~~~etYkrI~k~~~~~-------------------------------p~~is~~a~dlI~~ll~~~p  261 (281)
T KOG0580|consen  213 YEFLVGLPPFESQSHSETYKRIRKVDLKF-------------------------------PSTISGGAADLISRLLVKNP  261 (281)
T ss_pred             HHHHhcCCchhhhhhHHHHHHHHHccccC-------------------------------CcccChhHHHHHHHHhccCc
Confidence            99999999999998888888887542211                               13578999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|.+..|++.|||+..
T Consensus       262 ~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  262 IERLALTEVMDHPWIVA  278 (281)
T ss_pred             cccccHHHHhhhHHHHh
Confidence            99999999999999854

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.94  E-value=1.5e-27  Score=211.47  Aligned_cols=132  Identities=28%  Similarity=0.404  Sum_probs=109.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       153 vHrDLkp~NILl~-------~~~~ikL~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  218 (340)
T PTZ00426        153 VYRDLKPENLLLD-------KDGFIKMTDFGFAKVVDTR------TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFI  218 (340)
T ss_pred             EccCCCHHHEEEC-------CCCCEEEecCCCCeecCCC------cceecCChhhcCHHHHhC-CCCCccccccchhhHH
Confidence            6999999999999       8999999999999876432      234589999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|..||.+.+.......+.....                               .+.+..+..+.++|++||+.||
T Consensus       219 ~ell~G~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~~~~~~~li~~~l~~dp  267 (340)
T PTZ00426        219 YEILVGCPPFYANEPLLIYQKILEGII-------------------------------YFPKFLDNNCKHLMKKLLSHDL  267 (340)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHhcCCC-------------------------------CCCCCCCHHHHHHHHHHcccCH
Confidence            999999999988876655555432110                               0112457899999999999999


Q ss_pred             CCCC-----CHHHHhcCCcccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~  182 (308)
                      .+|+     |++++++||||+.
T Consensus       268 ~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        268 TKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCC
Confidence            9996     8999999999976

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.94  E-value=7.7e-27  Score=201.77  Aligned_cols=163  Identities=37%  Similarity=0.671  Sum_probs=127.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........   ......++..|+|||++.+...++.++|+||+||++
T Consensus       122 ~H~~l~p~nill~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il  191 (284)
T cd07860         122 LHRDLKPQNLLIN-------TEGAIKLADFGLARAFGVPVR---TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF  191 (284)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEeeccchhhcccCcc---ccccccccccccCCeEEecCCCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999986543221   123446788999999876655578899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+.+..+.+....+.....  ...+....+......+....+.+++++.++|.+||+.||
T Consensus       192 ~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  269 (284)
T cd07860         192 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDP  269 (284)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhH--HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCc
Confidence            999999999999998888888888888887655443221  122222233333333344455678999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      ++|||++++++||||
T Consensus       270 ~~Rpt~~~~l~~~~f  284 (284)
T cd07860         270 NKRISAKAALAHPFF  284 (284)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.94  E-value=5.6e-27  Score=205.97  Aligned_cols=135  Identities=28%  Similarity=0.469  Sum_probs=108.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       118 vH~dlkp~Nill~-------~~~~~kL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il  186 (316)
T cd05592         118 IYRDLKLDNVLLD-------KDGHIKIADFGMCKENMNGE---GKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGVLL  186 (316)
T ss_pred             EeCCCCHHHeEEC-------CCCCEEEccCcCCeECCCCC---CccccccCCccccCHHHHcC-CCCCCcccchhHHHHH
Confidence            6999999999999       88999999999998643322   11345689999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+....  +                             .+....+.++.+||.+||..||
T Consensus       187 ~ell~G~~Pf~~~~~~~~~~~i~~~~--~-----------------------------~~~~~~~~~~~~ll~~~l~~~P  235 (316)
T cd05592         187 YEMLIGQSPFHGEDEDELFDSILNDR--P-----------------------------HFPRWISKEAKDCLSKLFERDP  235 (316)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCC--C-----------------------------CCCCCCCHHHHHHHHHHccCCH
Confidence            99999999999887665555443210  0                             0112357889999999999999


Q ss_pred             CCCCCH-HHHhcCCcccc
Q psy7274         166 HKRIGV-EDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~-~eil~hp~f~~  182 (308)
                      .+|+++ +++++||||..
T Consensus       236 ~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         236 TKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             HHcCCChHHHHcCcccCC
Confidence            999986 58889999976

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.94  E-value=5.9e-27  Score=209.72  Aligned_cols=142  Identities=25%  Similarity=0.399  Sum_probs=106.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC--------------------------------CCCccC
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH--------------------------------TGFLTE   53 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~--------------------------------~~~~~~   53 (308)
                      .||||||+|||++       .++.+||+|||+|+........                                ......
T Consensus       123 vHrDlKp~NILi~-------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (363)
T cd05628         123 IHRDIKPDNLLLD-------SKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFS  195 (363)
T ss_pred             EecCCCHHHeEEC-------CCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhcccccccc
Confidence            6999999999999       8899999999999754321100                                001134


Q ss_pred             cccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhc
Q psy7274          54 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQS  133 (308)
Q Consensus        54 ~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  133 (308)
                      .+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+.+..+........                  
T Consensus       196 ~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~------------------  256 (363)
T cd05628         196 TVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLI------------------  256 (363)
T ss_pred             ccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCccc------------------
Confidence            689999999999865 5699999999999999999999999998887776666653211100                  


Q ss_pred             CCCCCCCCccccCCCCChhHHHHHHHhcccCCC---CCCCHHHHhcCCccccc
Q psy7274         134 LPFKPKVPWEILYPNADPNALDLLGKMLTFNPH---KRIGVEDALAHPYLEQY  183 (308)
Q Consensus       134 ~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~---~R~t~~eil~hp~f~~~  183 (308)
                      .+  +       ...+++++++||.+|+. +|.   .|++++|+++||||+..
T Consensus       257 ~p--~-------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         257 FP--P-------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             CC--C-------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            00  0       01357899999999876 454   45799999999999763

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.9e-27  Score=208.53  Aligned_cols=136  Identities=29%  Similarity=0.534  Sum_probs=108.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||+.|+|||++.+ ..++.++||||+||++
T Consensus       115 ~HrDlkp~Nili~-------~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil  183 (312)
T cd05585         115 IYRDLKPENILLD-------YQGHIALCDFGLCKLNMKDD---DKTNTFCGTPEYLAPELLLG-HGYTKAVDWWTLGVLL  183 (312)
T ss_pred             EeCCCCHHHeEEC-------CCCcEEEEECcccccCccCC---CccccccCCcccCCHHHHcC-CCCCCccceechhHHH
Confidence            6999999999999       88999999999998643221   11345689999999999865 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+....+..+...   +                            ..+...+++++.+||.+||..||
T Consensus       184 ~el~tg~~pf~~~~~~~~~~~~~~~---~----------------------------~~~~~~~~~~~~~li~~~L~~dp  232 (312)
T cd05585         184 YEMLTGLPPFYDENVNEMYRKILQE---P----------------------------LRFPDGFDRDAKDLLIGLLSRDP  232 (312)
T ss_pred             HHHHhCCCCcCCCCHHHHHHHHHcC---C----------------------------CCCCCcCCHHHHHHHHHHcCCCH
Confidence            9999999999887765544443211   0                            01123467899999999999999


Q ss_pred             CCCC---CHHHHhcCCccccc
Q psy7274         166 HKRI---GVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~---t~~eil~hp~f~~~  183 (308)
                      .+|+   ++.+++.||||...
T Consensus       233 ~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         233 TRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHcCCCCCHHHHHcCCCcCCC
Confidence            9997   58999999999763

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=3.9e-27  Score=207.56  Aligned_cols=136  Identities=22%  Similarity=0.389  Sum_probs=108.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||+
T Consensus       116 ivH~Dlkp~NIll~-------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi  184 (323)
T cd05595         116 VVYRDIKLENLMLD-------KDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV  184 (323)
T ss_pred             eEecCCCHHHEEEc-------CCCCEEecccHHhccccCCC---CccccccCCcCcCCcccccC-CCCCchhchhhhHHH
Confidence            36999999999999       88999999999987543221   11345689999999999865 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+.......+.....                               .+...+++++.+||.+||..|
T Consensus       185 l~ell~g~~Pf~~~~~~~~~~~~~~~~~-------------------------------~~p~~~~~~~~~li~~~L~~d  233 (323)
T cd05595         185 MYEMMCGRLPFYNQDHERLFELILMEEI-------------------------------RFPRTLSPEAKSLLAGLLKKD  233 (323)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhcCCC-------------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            9999999999988776555444431100                               011246789999999999999


Q ss_pred             CCCCC-----CHHHHhcCCcccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~  182 (308)
                      |.+|+     ++.++++|+||..
T Consensus       234 P~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         234 PKQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             HHHhCCCCCCCHHHHHcCCCcCC
Confidence            99998     8999999999976

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.94  E-value=7.5e-27  Score=201.50  Aligned_cols=162  Identities=40%  Similarity=0.702  Sum_probs=123.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       . +.+||+|||+++.......    .....++..|+|||++.++..++.++|+||+||+
T Consensus       121 i~H~dl~p~ni~l~-------~-~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~  188 (282)
T cd07831         121 IFHRDIKPENILIK-------D-DILKLADFGSCRGIYSKPP----YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCV  188 (282)
T ss_pred             ceecccCHHHEEEc-------C-CCeEEEecccccccccCCC----cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHH
Confidence            37999999999998       6 9999999999987643322    2345789999999987655567899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||++|.+||.+.+..+.+..+...++.+...............+  ..+...........+..+.++.++|.+||..+
T Consensus       189 l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  266 (282)
T cd07831         189 FFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY--NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYD  266 (282)
T ss_pred             HHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc--cCcccccccHHHHcccccHHHHHHHHHHhccC
Confidence            9999999999999999888888888888777654322111110000  01111111122233467899999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|||++++++||||
T Consensus       267 P~~R~~~~~~l~~~~~  282 (282)
T cd07831         267 PDERITAKQALRHPYF  282 (282)
T ss_pred             cccccCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0603|consensus

Probab=99.94  E-value=2.1e-27  Score=213.09  Aligned_cols=129  Identities=26%  Similarity=0.415  Sum_probs=106.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++      ++.++++|+|||.++.....      +.+.+-|..|.|||++. ..+|+.++||||+|++|
T Consensus       437 vhRDLkp~NIL~~------~~~g~lrltyFG~a~~~~~~------~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlL  503 (612)
T KOG0603|consen  437 VHRDLKPGNILLD------GSAGHLRLTYFGFWSELERS------CDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLL  503 (612)
T ss_pred             eecCCChhheeec------CCCCcEEEEEechhhhCchh------hcccchhhcccChhhhc-cCCCCcchhhHHHHHHH
Confidence            6999999999993      18899999999999987543      33457799999999986 57799999999999999


Q ss_pred             HHHhhCCCCCCCCCHH-HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYL-DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++|+.||...... +...+|    +.+.-.                             ..+|..+++||.+||+.|
T Consensus       504 y~ML~G~tp~~~~P~~~ei~~~i----~~~~~s-----------------------------~~vS~~AKdLl~~LL~~d  550 (612)
T KOG0603|consen  504 YEMLTGRTLFAAHPAGIEIHTRI----QMPKFS-----------------------------ECVSDEAKDLLQQLLQVD  550 (612)
T ss_pred             HHHHhCCCccccCCchHHHHHhh----cCCccc-----------------------------cccCHHHHHHHHHhccCC
Confidence            9999999999776554 222222    222111                             257899999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|+++.+++.||||
T Consensus       551 P~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  551 PALRLGADEIGAHPWF  566 (612)
T ss_pred             hhhCcChhhhccCcch
Confidence            9999999999999999

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=3.5e-27  Score=207.27  Aligned_cols=137  Identities=24%  Similarity=0.391  Sum_probs=108.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||+
T Consensus       117 ivHrDlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvi  185 (316)
T cd05620         117 IIYRDLKLDNVMLD-------RDGHIKIADFGMCKENVFGD---NRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGVL  185 (316)
T ss_pred             eEecCCCHHHeEEC-------CCCCEEeCccCCCeecccCC---CceeccCCCcCccCHHHHcC-CCCCcccchhhhHHH
Confidence            37999999999999       88999999999987532211   11345689999999999865 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+....+..+...  .+                             ......+.++.+||.+||+.|
T Consensus       186 l~el~~g~~Pf~~~~~~~~~~~~~~~--~~-----------------------------~~~~~~~~~~~~li~~~l~~d  234 (316)
T cd05620         186 LYEMLIGQSPFHGDDEDELFESIRVD--TP-----------------------------HYPRWITKESKDILEKLFERD  234 (316)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhC--CC-----------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            99999999999888765544443211  00                             011235789999999999999


Q ss_pred             CCCCCCH-HHHhcCCccccc
Q psy7274         165 PHKRIGV-EDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~-~eil~hp~f~~~  183 (308)
                      |.+|+++ +++++||||+..
T Consensus       235 P~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         235 PTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             HHHcCCChHHHHcCCCcCCC
Confidence            9999997 589999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=1.1e-27  Score=211.87  Aligned_cols=142  Identities=26%  Similarity=0.429  Sum_probs=106.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.........  ....+||..|+|||++.+...++.++||||+||+
T Consensus       126 ivHrDlkp~Nili~-------~~~~~kl~DfG~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  196 (332)
T cd05614         126 IVYRDIKLENILLD-------SEGHVVLTDFGLSKEFLSEEKER--TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGIL  196 (332)
T ss_pred             cEecCCCHHHeEEC-------CCCCEEEeeCcCCccccccCCCc--cccccCCccccCHHHhcCCCCCCCccccccchhh
Confidence            36999999999999       88999999999998654322111  2346899999999998755558899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||++|+.||.+.........+....                   ...   ..     .+...++..+.++|.+||..|
T Consensus       197 l~elltg~~pf~~~~~~~~~~~~~~~~-------------------~~~---~~-----~~~~~~~~~~~~li~~~l~~d  249 (332)
T cd05614         197 IFELLTGASPFTLEGERNTQSEVSRRI-------------------LKC---DP-----PFPSFIGPEAQDLLHKLLRKD  249 (332)
T ss_pred             hhhhhcCCCCCCCCCCCCCHHHHHHHH-------------------hcC---CC-----CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999997543211111111000                   000   00     011246789999999999999


Q ss_pred             CCCCC-----CHHHHhcCCcccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~  182 (308)
                      |++|+     +++++++||||+.
T Consensus       250 p~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         250 PKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             HHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999     7889999999976

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.94  E-value=7.3e-27  Score=205.21  Aligned_cols=136  Identities=26%  Similarity=0.435  Sum_probs=107.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       118 vHrdikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il  186 (316)
T cd05619         118 VYRDLKLDNILLD-------TDGHIKIADFGMCKENMLGDA---KTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGVLL  186 (316)
T ss_pred             EeCCCCHHHEEEC-------CCCCEEEccCCcceECCCCCC---ceeeecCCccccCHHHHcC-CCCCchhhhhhHHHHH
Confidence            6999999999999       889999999999875432211   1345679999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+...  .+                             ......+.++.+||.+||+.||
T Consensus       187 ~el~~G~~pf~~~~~~~~~~~i~~~--~~-----------------------------~~~~~~~~~~~~li~~~l~~~P  235 (316)
T cd05619         187 YEMLIGQSPFHGHDEEELFQSIRMD--NP-----------------------------CYPRWLTREAKDILVKLFVREP  235 (316)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhC--CC-----------------------------CCCccCCHHHHHHHHHHhccCH
Confidence            9999999999887765554443211  00                             0012357889999999999999


Q ss_pred             CCCCCHH-HHhcCCccccc
Q psy7274         166 HKRIGVE-DALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~-eil~hp~f~~~  183 (308)
                      .+|+++. ++++||||+..
T Consensus       236 ~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         236 ERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             hhcCCChHHHHcCcccCCC
Confidence            9999996 89999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0610|consensus

Probab=99.94  E-value=3.9e-27  Score=201.37  Aligned_cols=144  Identities=26%  Similarity=0.463  Sum_probs=114.9

Q ss_pred             ccCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCC--------------------------------CCC---
Q psy7274           3 MFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPE--------------------------------HDH---   47 (308)
Q Consensus         3 ~~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~--------------------------------~~~---   47 (308)
                      |.-.-|||||+||||.       ++|+|.|+||-++......                                ...   
T Consensus       198 lGivYRDLKPENILvr-------edGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~  270 (459)
T KOG0610|consen  198 LGIVYRDLKPENILVR-------EDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRK  270 (459)
T ss_pred             hceeeccCCcceeEEe-------cCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccc
Confidence            4456799999999999       9999999999997643110                                000   


Q ss_pred             ------------------CCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q psy7274          48 ------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILG  109 (308)
Q Consensus        48 ------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~  109 (308)
                                        .....++|||-.|.|||++.| .+.+.+||+|++|+++|||+.|..||.|.+..+.+..|+.
T Consensus       271 k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~  349 (459)
T KOG0610|consen  271 KKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG  349 (459)
T ss_pred             cccccccccchhhhcCCCCccccccccccccccceeeec-CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc
Confidence                              011246799999999999975 6699999999999999999999999999999988877753


Q ss_pred             hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCC----HHHHhcCCccccc
Q psy7274         110 ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG----VEDALAHPYLEQY  183 (308)
Q Consensus       110 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t----~~eil~hp~f~~~  183 (308)
                      .   +..                 .+   .      .+.++..++|||+++|..||.+|+.    |.||.+||||+..
T Consensus       350 ~---~l~-----------------Fp---~------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  350 Q---PLK-----------------FP---E------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV  398 (459)
T ss_pred             C---CCc-----------------CC---C------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence            2   111                 00   0      1246789999999999999999998    9999999999874

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.94  E-value=2.2e-27  Score=209.70  Aligned_cols=132  Identities=28%  Similarity=0.412  Sum_probs=107.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.....      ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       140 vH~dlkp~NIll~-------~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  205 (329)
T PTZ00263        140 IYRDLKPENLLLD-------NKGHVKVTDFGFAKKVPDR------TFTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLL  205 (329)
T ss_pred             eecCCCHHHEEEC-------CCCCEEEeeccCceEcCCC------cceecCChhhcCHHHHcC-CCCCCcceeechHHHH
Confidence            6999999999999       8999999999999876432      234589999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+....+..+...  .+                             .+...++..+.+||.+||+.||
T Consensus       206 ~elltg~~pf~~~~~~~~~~~i~~~--~~-----------------------------~~p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        206 YEFIAGYPPFFDDTPFRIYEKILAG--RL-----------------------------KFPNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHhcC--Cc-----------------------------CCCCCCCHHHHHHHHHHhhcCH
Confidence            9999999999887765555444321  00                             0012357889999999999999


Q ss_pred             CCCCC-----HHHHhcCCcccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~  182 (308)
                      .+|++     +++++.||||..
T Consensus       255 ~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        255 TKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HHcCCCCCCCHHHHhcCCccCC
Confidence            99997     799999999976

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=3e-27  Score=208.11  Aligned_cols=135  Identities=24%  Similarity=0.406  Sum_probs=110.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       118 vHrDikp~Nill~-------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il  186 (321)
T cd05591         118 IYRDLKLDNILLD-------AEGHCKLADFGMCKEGILNG---VTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGVLM  186 (321)
T ss_pred             eccCCCHHHeEEC-------CCCCEEEeecccceecccCC---ccccccccCccccCHHHHcC-CCCCCccceechhHHH
Confidence            6999999999999       89999999999998643221   11345689999999999864 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.....                               ......+.++.++|.+||+.||
T Consensus       187 ~el~tg~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~~~~~~~ll~~~L~~dp  235 (321)
T cd05591         187 YEMMAGQPPFEADNEDDLFESILHDDV-------------------------------LYPVWLSKEAVSILKAFMTKNP  235 (321)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCCCCCCHHHHHHHHHHhccCH
Confidence            999999999999887766665542110                               0012357899999999999999


Q ss_pred             CCCC-------CHHHHhcCCcccc
Q psy7274         166 HKRI-------GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~-------t~~eil~hp~f~~  182 (308)
                      ++|+       +++++++||||..
T Consensus       236 ~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         236 NKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             HHcCCCCCCCCCHHHHhcCCccCC
Confidence            9999       8999999999965

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.4e-27  Score=206.70  Aligned_cols=142  Identities=25%  Similarity=0.417  Sum_probs=111.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+....      .....+||..|+|||++.+ ..++.++||||+||+
T Consensus       122 ivH~dlkp~Nil~~-------~~~~~kL~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~i  187 (333)
T cd05600         122 YIHRDLKPENFLID-------ASGHIKLTDFGLSKGIVT------YANSVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCM  187 (333)
T ss_pred             ccccCCCHHHEEEC-------CCCCEEEEeCcCCccccc------ccCCcccCccccChhHhcC-CCCCCccceecchHH
Confidence            36999999999999       899999999999986543      1345689999999999865 469999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|..||.+.+..+.+..+.........                  +     ........++.++.+||.+||..+
T Consensus       188 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~------------------~-----~~~~~~~~~s~~~~~li~~~l~~~  244 (333)
T cd05600         188 LYEFLCGFPPFSGSTPNETWENLKYWKETLQR------------------P-----VYDDPRFNLSDEAWDLITKLINDP  244 (333)
T ss_pred             HhhhhhCCCCCCCCCHHHHHHHHHhccccccC------------------C-----CCCccccccCHHHHHHHHHHhhCh
Confidence            99999999999988876666555432110000                  0     000001246889999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|++++++++||||...
T Consensus       245 ~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         245 SRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             hhhcCCHHHHHhCcccCCC
Confidence            9999999999999999763

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=4.7e-27  Score=207.18  Aligned_cols=135  Identities=24%  Similarity=0.395  Sum_probs=109.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       123 vH~dlkp~Nill~-------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil  191 (324)
T cd05587         123 IYRDLKLDNVMLD-------AEGHIKIADFGMCKENIFGG---KTTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLL  191 (324)
T ss_pred             EecCCCHHHeEEc-------CCCCEEEeecCcceecCCCC---CceeeecCCccccChhhhcC-CCCCcccchhhhHHHH
Confidence            6999999999999       88999999999987532211   11345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.....                               .+...++.++.+++.+||..||
T Consensus       192 ~elltG~~pf~~~~~~~~~~~i~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~P  240 (324)
T cd05587         192 YEMLAGQPPFDGEDEDELFQSIMEHNV-------------------------------SYPKSLSKEAVSICKGLLTKHP  240 (324)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCCCCCCHHHHHHHHHHhhcCH
Confidence            999999999998877666655532110                               0112467899999999999999


Q ss_pred             CCCCCH-----HHHhcCCcccc
Q psy7274         166 HKRIGV-----EDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~-----~eil~hp~f~~  182 (308)
                      .+|+++     +++++||||..
T Consensus       241 ~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         241 AKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCC
Confidence            999986     89999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=7.9e-27  Score=209.26  Aligned_cols=141  Identities=23%  Similarity=0.337  Sum_probs=110.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC---CCCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS---KGYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DiWSlG   82 (308)
                      .||||||+|||++       .++.+||+|||+++........  .....+||+.|+|||++.+.   ..++.++||||+|
T Consensus       164 vHrDLkp~NILl~-------~~~~~kL~DfG~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlG  234 (370)
T cd05596         164 IHRDVKPDNMLLD-------KSGHLKLADFGTCMKMDANGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (370)
T ss_pred             eccCCCHHHEEEc-------CCCCEEEEeccceeeccCCCcc--cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehh
Confidence            6999999999999       8999999999999876432211  12456899999999998643   2378999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++|||++|+.||.+.+....+..+.......                          .+. ....++.++.+||.+||+
T Consensus       235 vilyelltG~~Pf~~~~~~~~~~~i~~~~~~~--------------------------~~~-~~~~~s~~~~~li~~~L~  287 (370)
T cd05596         235 VFLYEMLVGDTPFYADSLVGTYSKIMDHKNSL--------------------------TFP-DDIEISKQAKDLICAFLT  287 (370)
T ss_pred             HHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcC--------------------------CCC-CcCCCCHHHHHHHHHHcc
Confidence            99999999999999888766655554311100                          000 012468999999999999


Q ss_pred             cCCCC--CCCHHHHhcCCcccc
Q psy7274         163 FNPHK--RIGVEDALAHPYLEQ  182 (308)
Q Consensus       163 ~dP~~--R~t~~eil~hp~f~~  182 (308)
                      .+|.+  |+|++++++||||+.
T Consensus       288 ~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         288 DREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             ChhhccCCCCHHHHhcCcccCC
Confidence            99988  999999999999976

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=7.6e-27  Score=205.83  Aligned_cols=136  Identities=21%  Similarity=0.405  Sum_probs=109.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++|+||+||++
T Consensus       123 vHrdlkp~Nill~-------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il  191 (324)
T cd05589         123 VYRDLKLDNLLLD-------TEGFVKIADFGLCKEGMGFG---DRTSTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLI  191 (324)
T ss_pred             EecCCCHHHeEEC-------CCCcEEeCcccCCccCCCCC---CcccccccCccccCHhHhcC-CCCCcccchhhHHHHH
Confidence            6999999999999       89999999999987543221   11345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.....                               .....++..+.++|.+||+.||
T Consensus       192 ~el~~G~~pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~~~~~~~li~~~L~~dP  240 (324)
T cd05589         192 YEMLVGESPFPGDDEEEVFDSIVNDEV-------------------------------RYPRFLSREAISIMRRLLRRNP  240 (324)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------------------CCCCCCCHHHHHHHHHHhhcCH
Confidence            999999999998877666555432110                               0112467899999999999999


Q ss_pred             CCCC-----CHHHHhcCCccccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~~  183 (308)
                      .+|+     ++.++++||||+..
T Consensus       241 ~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         241 ERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             hHcCCCCCCCHHHHhhCCCcCCC
Confidence            9999     69999999999763

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=2.1e-26  Score=199.13  Aligned_cols=163  Identities=35%  Similarity=0.740  Sum_probs=120.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++.........   .....++.+|+|||++.+...++.++|+||+||+
T Consensus       121 i~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i  190 (286)
T cd07847         121 CIHRDVKPENILIT-------KQGQIKLCDFGFARILTGPGDD---YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCV  190 (286)
T ss_pred             ceecCCChhhEEEc-------CCCcEEECccccceecCCCccc---ccCcccccccCCHHHHhCCCCcCchhhhHHHHHH
Confidence            36999999999998       8899999999999876543211   2345688999999998765668899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcC--C-CCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSL--P-FKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      +++|++|++||.+.+..+.+..+....+...+........   ..+....  + .....+.....+.++..+.+|+.+||
T Consensus       191 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  267 (286)
T cd07847         191 FAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST---NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCL  267 (286)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc---ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHh
Confidence            9999999999999888777777766555443321111000   0010000  0 01111233345567899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      ..+|++|||+.+++.||||
T Consensus       268 ~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         268 QMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCCccccCCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.94  E-value=5.6e-27  Score=206.58  Aligned_cols=135  Identities=22%  Similarity=0.378  Sum_probs=109.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       123 vHrDlkp~Nill~-------~~~~~kL~DfG~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  191 (323)
T cd05616         123 IYRDLKLDNVMLD-------SEGHIKIADFGMCKENMWDGV---TTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLL  191 (323)
T ss_pred             EecCCCHHHeEEC-------CCCcEEEccCCCceecCCCCC---ccccCCCChhhcCHHHhcC-CCCCCccchhchhHHH
Confidence            6999999999999       899999999999985432211   1345689999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+....+..+......                               +....+.++.+++.+||+.||
T Consensus       192 ~elltg~~Pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~li~~~l~~~p  240 (323)
T cd05616         192 YEMLAGQAPFEGEDEDELFQSIMEHNVA-------------------------------YPKSMSKEAVAICKGLMTKHP  240 (323)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------------------------CCCcCCHHHHHHHHHHcccCH
Confidence            9999999999988876666555432110                               112467899999999999999


Q ss_pred             CCCCCH-----HHHhcCCcccc
Q psy7274         166 HKRIGV-----EDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~-----~eil~hp~f~~  182 (308)
                      .+|+++     .++++||||+.
T Consensus       241 ~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         241 GKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             HhcCCCCCCCHHHHhcCCCcCC
Confidence            999984     89999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.2e-26  Score=212.15  Aligned_cols=167  Identities=25%  Similarity=0.338  Sum_probs=110.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++.+||+|||+|+........ ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       282 vHrDLKP~NILl~-------~~~~vkL~DFGla~~~~~~~~~-~~~~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL  352 (461)
T PHA03211        282 IHRDIKTENVLVN-------GPEDICLGDFGAACFARGSWST-PFHYGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVI  352 (461)
T ss_pred             EECcCCHHHEEEC-------CCCCEEEcccCCceeccccccc-ccccccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHH
Confidence            6999999999999       8899999999999865432211 11234579999999999865 5599999999999999


Q ss_pred             HHHhhCCCC-CCCC------CHHHHHHHHHHhhCCCChhhHhhh---hhHHHHH--HhhcCCCCCCCCccccCCCCChhH
Q psy7274          86 AEMISNRPI-FPGK------HYLDQLNHILGILGSPTPEDLSCI---INEKARS--YLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        86 ~ell~g~~p-f~~~------~~~~~l~~i~~~~~~p~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      |||++|..+ |.+.      ....++..++...+..........   .......  .....+......|.. +..++.++
T Consensus       353 ~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  431 (461)
T PHA03211        353 FEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTR-YYKLDLDV  431 (461)
T ss_pred             HHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhh-hccccchH
Confidence            999998754 4332      123445555444332211110000   0000000  011111122222322 23567899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      .+||.+||++||.+|||+.|+|+||||+.
T Consensus       432 ~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        432 EYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            99999999999999999999999999964

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=1.9e-26  Score=200.46  Aligned_cols=164  Identities=37%  Similarity=0.654  Sum_probs=125.4

Q ss_pred             CCCCCCCCCCcccCccccccCC-CCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYD-PADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~-~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+||+++       . ++.+||+|||+++.......   ..+...++.+|+|||++.+...++.++|+||+||
T Consensus       131 i~H~dl~~~nil~~-------~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~  200 (295)
T cd07837         131 VMHRDLKPQNLLVD-------KQKGLLKIADLGLGRAFSIPVK---SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGC  200 (295)
T ss_pred             eeecCCChHHEEEe-------cCCCeEEEeecccceecCCCcc---ccCCcccccCCCChHHhhCCCCCCchHHHHHHHH
Confidence            36999999999998       5 88999999999986543211   1233467889999999876566899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|..||.+.+....+..+...++.+....+..........   ..+...........+..+..+.+||.+||..
T Consensus       201 ~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  277 (295)
T cd07837         201 IFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWH---EFPQWKPQDLSRAVPDLSPEGLDLLQKMLRY  277 (295)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchh---hcCcccchhHHHhccccCHHHHHHHHHHccC
Confidence            9999999999999999888888888888877766554332211110   0111111122233456789999999999999


Q ss_pred             CCCCCCCHHHHhcCCccc
Q psy7274         164 NPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~  181 (308)
                      ||.+|||+++++.||||+
T Consensus       278 ~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         278 DPAKRISAKAALTHPYFD  295 (295)
T ss_pred             ChhhcCCHHHHhcCCCcC
Confidence            999999999999999994

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0595|consensus

Probab=99.94  E-value=5.2e-27  Score=200.40  Aligned_cols=145  Identities=26%  Similarity=0.404  Sum_probs=112.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+.. ......-.+||+|||+||.....    ....+.||++.|||||++.. ..|+.++|+||+|+|+
T Consensus       131 iHRDLKPQNiLLs~~-~~~~~~~~LKIADFGfAR~L~~~----~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Il  204 (429)
T KOG0595|consen  131 IHRDLKPQNILLSTT-ARNDTSPVLKIADFGFARFLQPG----SMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTIL  204 (429)
T ss_pred             eeccCCcceEEeccC-CCCCCCceEEecccchhhhCCch----hHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHH
Confidence            699999999999821 11111167999999999988743    23567899999999999864 5599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|++||...+..+.+..+...-...+                            ......+....+|+...|+.++
T Consensus       205 yq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~----------------------------~~~~~~s~~~~~Ll~~ll~~~~  256 (429)
T KOG0595|consen  205 YQCLTGKPPFDAETPKELLLYIKKGNEIVP----------------------------VLPAELSNPLRELLISLLQRNP  256 (429)
T ss_pred             HHHHhCCCCccccCHHHHHHHHhccccccC----------------------------chhhhccCchhhhhhHHHhcCc
Confidence            999999999999988877765543211110                            0011346778899999999999


Q ss_pred             CCCCCHHHHhcCCcccccc
Q psy7274         166 HKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~  184 (308)
                      .+|.+..+-+.|++...-.
T Consensus       257 ~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  257 KDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             cccCchHHhhhhhhcccCc
Confidence            9999999999999997644

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=2.3e-26  Score=199.86  Aligned_cols=165  Identities=39%  Similarity=0.721  Sum_probs=126.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.......   ......++..|+|||.+.+...++.++|+||+||+
T Consensus       127 i~H~dl~p~nili~-------~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~  196 (293)
T cd07843         127 ILHRDLKTSNLLLN-------NRGILKICDFGLAREYGSPLK---PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCI  196 (293)
T ss_pred             eeeccCCHHHEEEC-------CCCcEEEeecCceeeccCCcc---ccccccccccccCchhhcCCccccchhhHHHHHHH
Confidence            37999999999999       889999999999987654321   12345678899999998765557899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCC--CChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN--ADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~ll~~~L~  162 (308)
                      +++|++|.++|.+.+..+.+..+....+.|.+..+........... ..........+...++.  +++.+.++|.+||+
T Consensus       197 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  275 (293)
T cd07843         197 FAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK-KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLT  275 (293)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc-cccccccchhhhccccccCCChHHHHHHHHHhc
Confidence            9999999999999999999999999899888877664422111000 00111111112223344  48899999999999


Q ss_pred             cCCCCCCCHHHHhcCCcc
Q psy7274         163 FNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f  180 (308)
                      .+|++|||+.|++.||||
T Consensus       276 ~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         276 YDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cCccccCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0696|consensus

Probab=99.94  E-value=1.2e-26  Score=198.39  Aligned_cols=167  Identities=21%  Similarity=0.381  Sum_probs=129.5

Q ss_pred             CCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHH
Q psy7274           7 HKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA   86 (308)
Q Consensus         7 HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~   86 (308)
                      -||||.+|||+|       ++|++||+|||+++..-.+..   ...++|||+-|+|||++. ...|+.++|+||+|+++|
T Consensus       473 YRDLKLDNvmLd-------~eGHiKi~DFGmcKEni~~~~---TTkTFCGTPdYiAPEIi~-YqPYgksvDWWa~GVLLy  541 (683)
T KOG0696|consen  473 YRDLKLDNVMLD-------SEGHIKIADFGMCKENIFDGV---TTKTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLY  541 (683)
T ss_pred             eeeccccceEec-------cCCceEeeecccccccccCCc---ceeeecCCCcccccceEE-ecccccchhHHHHHHHHH
Confidence            489999999999       999999999999986433222   146789999999999986 577999999999999999


Q ss_pred             HHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCC
Q psy7274          87 EMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPH  166 (308)
Q Consensus        87 ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~  166 (308)
                      ||+.|++||.|++..+.++.|.+---                               .....+|.++.++.+.+|...|.
T Consensus       542 EmlaGQpPFdGeDE~elF~aI~ehnv-------------------------------syPKslSkEAv~ickg~ltK~P~  590 (683)
T KOG0696|consen  542 EMLAGQPPFDGEDEDELFQAIMEHNV-------------------------------SYPKSLSKEAVAICKGLLTKHPG  590 (683)
T ss_pred             HHHcCCCCCCCCCHHHHHHHHHHccC-------------------------------cCcccccHHHHHHHHHHhhcCCc
Confidence            99999999999999999988875311                               11124689999999999999999


Q ss_pred             CCCCH-----HHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccC
Q psy7274         167 KRIGV-----EDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  225 (308)
Q Consensus       167 ~R~t~-----~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~  225 (308)
                      +|+.+     ++|..||||+.+        +|...-  .....|+.++.+.-..+..+|+.++.
T Consensus       591 kRLGcg~~ge~di~~H~FFR~i--------DWek~E--~~eiqPPfkPk~k~~r~~eNFD~~Ft  644 (683)
T KOG0696|consen  591 KRLGCGPEGERDIREHPFFRRI--------DWEKLE--RREIQPPFKPKIKCGRDAENFDKFFT  644 (683)
T ss_pred             cccCCCCccccchhhCcchhhc--------cHHHHh--hccCCCCCCCccccCCchhhhhHHHh
Confidence            99975     689999999874        432221  22345555555555555555555443

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.9e-27  Score=208.61  Aligned_cols=143  Identities=28%  Similarity=0.471  Sum_probs=110.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC--------------------------CCCCCccCccccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH--------------------------DHTGFLTEYVATR   58 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~--------------------------~~~~~~~~~~gt~   58 (308)
                      -.||||||+|||++       .++.+||+|||+++......                          .........+||.
T Consensus       122 iiH~Dlkp~NIll~-------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  194 (350)
T cd05573         122 FIHRDIKPDNILID-------ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTP  194 (350)
T ss_pred             eeccCCCHHHeEEC-------CCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCc
Confidence            36999999999999       89999999999998664332                          0001134567999


Q ss_pred             ccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCC
Q psy7274          59 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKP  138 (308)
Q Consensus        59 ~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  138 (308)
                      .|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+.......+........                  .+.  
T Consensus       195 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------~p~--  253 (350)
T cd05573         195 DYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLR------------------FPP--  253 (350)
T ss_pred             cccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCccc------------------CCC--
Confidence            9999999865 4699999999999999999999999998876665555543111000                  000  


Q ss_pred             CCCccccCCCCChhHHHHHHHhcccCCCCCCC-HHHHhcCCccccc
Q psy7274         139 KVPWEILYPNADPNALDLLGKMLTFNPHKRIG-VEDALAHPYLEQY  183 (308)
Q Consensus       139 ~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t-~~eil~hp~f~~~  183 (308)
                             ...+++++.+||.+||. ||.+|++ ++++++||||+..
T Consensus       254 -------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         254 -------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             -------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence                   11257999999999998 9999999 9999999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=1.6e-26  Score=199.76  Aligned_cols=163  Identities=41%  Similarity=0.757  Sum_probs=129.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       +++.+||+|||+++.......   .....++|..|++||++.+...++.++|+||+||++
T Consensus       122 ~h~dl~p~ni~~~-------~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l  191 (284)
T cd07836         122 LHRDLKPQNLLIN-------KRGELKLADFGLARAFGIPVN---TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIM  191 (284)
T ss_pred             eeCCCCHHHEEEC-------CCCcEEEeecchhhhhcCCcc---ccccccccccccChHHhcCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999986543211   123456788999999987656688999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.+|.+.+..+.+..+.+..+.|....+..+...  ..+....+.........+.+..+..+.+++.+||+.||
T Consensus       192 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  269 (284)
T cd07836         192 AEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL--PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNP  269 (284)
T ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcC--chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCc
Confidence            9999999999999999999999988888888776654421  12222222222223334445678999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+||++.++++||||
T Consensus       270 ~~R~~~~~~l~~~~f  284 (284)
T cd07836         270 ELRISAHDALQHPWF  284 (284)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=8.2e-27  Score=208.86  Aligned_cols=142  Identities=27%  Similarity=0.477  Sum_probs=107.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-----------------------------------CC
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-----------------------------------GF   50 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-----------------------------------~~   50 (308)
                      .||||||+|||++       .++.+||+|||++..........                                   ..
T Consensus       123 vH~Dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (364)
T cd05599         123 IHRDIKPDNLLLD-------AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRAL  195 (364)
T ss_pred             EeccCCHHHeEEC-------CCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccc
Confidence            6999999999999       89999999999987643211000                                   01


Q ss_pred             ccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHH
Q psy7274          51 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSY  130 (308)
Q Consensus        51 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~  130 (308)
                      ....+||+.|+|||++.+ ..++.++||||+||++|||++|..||.+.+..+....+......                 
T Consensus       196 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~-----------------  257 (364)
T cd05599         196 AYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKET-----------------  257 (364)
T ss_pred             ccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCc-----------------
Confidence            123579999999999864 56999999999999999999999999988766555544321100                 


Q ss_pred             hhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCC---HHHHhcCCccccc
Q psy7274         131 LQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG---VEDALAHPYLEQY  183 (308)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t---~~eil~hp~f~~~  183 (308)
                         .....       ...+++++.+||.+||. +|.+|++   ++++++||||+..
T Consensus       258 ---~~~~~-------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         258 ---LQFPD-------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             ---cCCCC-------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence               00000       01357899999999997 9999998   9999999999764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.94  E-value=2e-26  Score=202.56  Aligned_cols=135  Identities=25%  Similarity=0.400  Sum_probs=108.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       118 vH~dlkp~Nill~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslGvil  186 (318)
T cd05570         118 IYRDLKLDNVLLD-------SEGHIKIADFGMCKEGILGGV---TTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGVLL  186 (318)
T ss_pred             EccCCCHHHeEEC-------CCCcEEecccCCCeecCcCCC---cccceecCccccCHHHhcC-CCCCcchhhhhHHHHH
Confidence            6999999999999       889999999999875322211   1244579999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+.......+.....                               ......+..+.+||.+||..||
T Consensus       187 ~~l~~G~~pf~~~~~~~~~~~i~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~dP  235 (318)
T cd05570         187 YEMLAGQSPFEGDDEDELFQSILEDEV-------------------------------RYPRWLSKEAKSILKSFLTKNP  235 (318)
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCCCcCCHHHHHHHHHHccCCH
Confidence            999999999988776555444322100                               0112457899999999999999


Q ss_pred             CCCCCH-----HHHhcCCcccc
Q psy7274         166 HKRIGV-----EDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~-----~eil~hp~f~~  182 (308)
                      .+|+|+     .++++||||+.
T Consensus       236 ~~R~s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         236 EKRLGCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCC
Confidence            999999     99999999976

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=3e-26  Score=199.54  Aligned_cols=169  Identities=37%  Similarity=0.711  Sum_probs=130.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++........   .....++..|+|||.+.+...++.++|+||+||++
T Consensus       124 ~H~dl~p~nill~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il  193 (298)
T cd07841         124 LHRDLKPNNLLIA-------SDGVLKLADFGLARSFGSPNRK---MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIF  193 (298)
T ss_pred             eecCCChhhEEEc-------CCCCEEEccceeeeeccCCCcc---ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       8899999999999876543211   23346788999999986656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|.++|.+.+..+.+..+....+.+....+.......  .+. ........+....+...+..+.++|.+||..||
T Consensus       194 ~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  270 (298)
T cd07841         194 AELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP--DYV-EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNP  270 (298)
T ss_pred             HHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc--ccc-cccccCCcchhhhcccccHHHHHHHHHHhcCCc
Confidence            99999999999988888888888888877766554322111  111 111122233344556678999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      ++|||+.++++|+||++...+.
T Consensus       271 ~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         271 NKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             ccCcCHHHHhhCccccCCCCCC
Confidence            9999999999999998865543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.94  E-value=2.4e-26  Score=203.20  Aligned_cols=156  Identities=23%  Similarity=0.393  Sum_probs=108.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......     ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       126 vH~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~-----~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il  192 (331)
T cd06649         126 MHRDVKPSNILVN-------SRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL  192 (331)
T ss_pred             EcCCCChhhEEEc-------CCCcEEEccCcccccccccc-----cccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHH
Confidence            5999999999998       88999999999998654321     244579999999999865 5599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhh----Hhh----------------------hhhHHHHHHhhcCCCCCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPED----LSC----------------------IINEKARSYLQSLPFKPK  139 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~----~~~----------------------~~~~~~~~~~~~~~~~~~  139 (308)
                      |+|++|+.||.+.+..+... +   ++.+....    ...                      ........+...... +.
T Consensus       193 ~el~tg~~p~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  267 (331)
T cd06649         193 VELAIGRYPIPPPDAKELEA-I---FGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPP-PK  267 (331)
T ss_pred             HHHHhCCCCCCCCCHHHHHH-H---hcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCC-cC
Confidence            99999999998766544322 2   12111000    000                      000000111111000 00


Q ss_pred             CCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         140 VPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       140 ~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                          ......++++++||.+||+.||++|||++++++||||+..
T Consensus       268 ----~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         268 ----LPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             ----CCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                0012357899999999999999999999999999999764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.94  E-value=9.5e-27  Score=208.65  Aligned_cols=141  Identities=23%  Similarity=0.329  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC---CCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK---GYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiWSlG   82 (308)
                      .||||||+|||++       .++.+||+|||+|.........  .....+||..|+|||++.+..   .++.++|+||+|
T Consensus       164 vHrDLKp~NILl~-------~~~~~kL~DFG~a~~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG  234 (370)
T cd05621         164 IHRDVKPDNMLLD-------KHGHLKLADFGTCMKMDETGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (370)
T ss_pred             EecCCCHHHEEEC-------CCCCEEEEecccceecccCCce--ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeeh
Confidence            6999999999999       8999999999999876432211  124568999999999986432   378899999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++|+|++|+.||.+.+....+..+........                          +. ....++..+++++.+||.
T Consensus       235 ~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--------------------------~p-~~~~~s~~~~~li~~~L~  287 (370)
T cd05621         235 VFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN--------------------------FP-EDVEISKHAKNLICAFLT  287 (370)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC--------------------------CC-CcccCCHHHHHHHHHHcc
Confidence            999999999999998887666655543211100                          00 001357899999999998


Q ss_pred             cCCCC--CCCHHHHhcCCcccc
Q psy7274         163 FNPHK--RIGVEDALAHPYLEQ  182 (308)
Q Consensus       163 ~dP~~--R~t~~eil~hp~f~~  182 (308)
                      .++.+  |+|++++++||||+.
T Consensus       288 ~~~~r~~R~~~~e~l~hp~~~~  309 (370)
T cd05621         288 DREVRLGRNGVEEIKQHPFFKN  309 (370)
T ss_pred             CchhccCCCCHHHHhcCcccCC
Confidence            65544  889999999999976

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.94  E-value=4e-27  Score=208.11  Aligned_cols=140  Identities=26%  Similarity=0.375  Sum_probs=109.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC-----CCCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-----SKGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DiWS   80 (308)
                      .||||||+|||++       .++.+||+|||+|.........  .....+||+.|+|||++..     ...++.++||||
T Consensus       124 ~H~Dlkp~NIll~-------~~~~~kL~Dfg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws  194 (330)
T cd05601         124 VHRDIKPENVLID-------RTGHIKLADFGSAARLTANKMV--NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWS  194 (330)
T ss_pred             EcccCchHheEEC-------CCCCEEeccCCCCeECCCCCce--eeecccCCccccCHHHhccccccccCCCCCcceeec
Confidence            6999999999999       8999999999999876533211  1234579999999999852     345789999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||++|+|++|+.||.+.+....+..+.......                          .+. ..+.++.++.+||.+|
T Consensus       195 lG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~--------------------------~~~-~~~~~~~~~~~li~~l  247 (330)
T cd05601         195 LGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFL--------------------------KFP-EDPKVSSDFLDLIQSL  247 (330)
T ss_pred             ccceeeeeccCCCCCCCCCHHHHHHHHHcCCCcc--------------------------CCC-CCCCCCHHHHHHHHHH
Confidence            9999999999999998877666555544321000                          000 0124678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCcccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      |. +|.+|+|++++++||||..
T Consensus       248 l~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         248 LC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             cc-ChhhCCCHHHHhCCCCcCC
Confidence            98 9999999999999999976

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.94  E-value=3.6e-26  Score=197.48  Aligned_cols=163  Identities=39%  Similarity=0.711  Sum_probs=126.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||+|+||+++       .++.++|+|||+++.......   ......++..|+|||++.+...++.++|+||+||++
T Consensus       121 ~H~dl~p~nil~~-------~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l  190 (283)
T cd07835         121 LHRDLKPQNLLID-------REGALKLADFGLARAFGVPVR---TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIF  190 (283)
T ss_pred             eCCCCCHHHEEEc-------CCCcEEEeecccccccCCCcc---ccCccccccCCCCCceeecCcccCcHHHHHHHHHHH
Confidence            6999999999999       889999999999986543211   123346788999999876655578999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+....+..+....+.|....+......  ..+....+...........+..+..+.++|.+||+.||
T Consensus       191 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  268 (283)
T cd07835         191 AEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSL--PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDP  268 (283)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhc--hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCCh
Confidence            9999999999999988888888888888887765443221  11222222222223333455678999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||++++++||||
T Consensus       269 ~~Rpt~~~il~~~~~  283 (283)
T cd07835         269 AKRISAKAALQHPYF  283 (283)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.94  E-value=2.6e-26  Score=200.95  Aligned_cols=167  Identities=37%  Similarity=0.617  Sum_probs=124.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC--------CCCccCcccccccchhhHhhCCCCCCchhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH--------TGFLTEYVATRWYRAPEIMLNSKGYTKSID   77 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~--------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~D   77 (308)
                      .||||||+||+++       .++.+||+|||+++........        ....+..+|+..|+|||++.+...++.++|
T Consensus       137 ~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  209 (311)
T cd07866         137 LHRDIKAANILID-------NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD  209 (311)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence            6999999999999       8999999999999865432211        111244577899999999876566899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          78 IWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        78 iWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      |||+||++++|++|+++|.+.+.......+....+.+.+..+........... ..........+...+...++.+.++|
T Consensus       210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  288 (311)
T cd07866         210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEG-VHSFTNYPRTLEERFGKLGPEGLDLL  288 (311)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccc-cccCCCCCccHHHHcccCChhHHHHH
Confidence            99999999999999999999999999999888888777665543211000000 00001111122233445678899999


Q ss_pred             HHhcccCCCCCCCHHHHhcCCcc
Q psy7274         158 GKMLTFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~hp~f  180 (308)
                      .+||..||.+|||+.+++.||||
T Consensus       289 ~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         289 SKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHcccCcccCcCHHHHhcCCCC
Confidence            99999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=9.2e-27  Score=205.21  Aligned_cols=135  Identities=28%  Similarity=0.489  Sum_probs=109.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+ ..++.++||||+||++
T Consensus       122 vH~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  190 (323)
T cd05584         122 IYRDLKPENILLD-------AQGHVKLTDFGLCKESIHEGT---VTHTFCGTIEYMAPEILMR-SGHGKAVDWWSLGALM  190 (323)
T ss_pred             ecCCCCHHHeEEC-------CCCCEEEeeCcCCeecccCCC---cccccCCCccccChhhccC-CCCCCcceecccHHHH
Confidence            6999999999999       889999999999875432211   1244579999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+....+..+....                               ..+.+..++.+.+||.+||+.||
T Consensus       191 ~ell~G~~pf~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p  239 (323)
T cd05584         191 YDMLTGAPPFTAENRKKTIDKILKGK-------------------------------LNLPPYLTPEARDLLKKLLKRNP  239 (323)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCCCCCCHHHHHHHHHHcccCH
Confidence            99999999998887665555443210                               01123467899999999999999


Q ss_pred             CCCC-----CHHHHhcCCcccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~  182 (308)
                      .+|+     +++++++||||..
T Consensus       240 ~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         240 SSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             hHcCCCCCCCHHHHhcCCCcCC
Confidence            9999     8999999999976

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=2.7e-26  Score=201.32  Aligned_cols=168  Identities=36%  Similarity=0.644  Sum_probs=119.5

Q ss_pred             CCCCCCCCCcccCccccccCC----CCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYD----PADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~----~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .    ++.+||+|||+++...............++|.+|+|||++.+...++.++|+||+
T Consensus       130 ~h~dlkp~Nil~~-------~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl  202 (316)
T cd07842         130 LHRDLKPANILVM-------GEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAI  202 (316)
T ss_pred             eeCCCCHHHEEEc-------CCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHH
Confidence            6999999999998       6    8999999999998764432211112345789999999998765668999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCH---------HHHHHHHHHhhCCCChhhHhhhhhHHH-HHHhhcC--CCCCCCCccc---cC
Q psy7274          82 GCILAEMISNRPIFPGKHY---------LDQLNHILGILGSPTPEDLSCIINEKA-RSYLQSL--PFKPKVPWEI---LY  146 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~---------~~~l~~i~~~~~~p~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~---~~  146 (308)
                      ||++++|++|++||.+...         ...+..++..++.+.+..+........ .......  ..........   ..
T Consensus       203 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (316)
T cd07842         203 GCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKH  282 (316)
T ss_pred             HHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhc
Confidence            9999999999999977553         245667777777776655543222110 0100000  0000000111   11


Q ss_pred             CCCChhHHHHHHHhcccCCCCCCCHHHHhcCCcc
Q psy7274         147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       147 ~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f  180 (308)
                      ...+..+.++|.+||+.||++|||+.|+++||||
T Consensus       283 ~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         283 KKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             cCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            2567889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=3.1e-26  Score=197.71  Aligned_cols=164  Identities=49%  Similarity=0.862  Sum_probs=130.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+||+++       .++.+||+|||.+.......   .......++..|+|||.+.+...++.++|+||+||++
T Consensus       120 ~H~dl~p~nili~-------~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l  189 (283)
T cd05118         120 LHRDLKPENLLIN-------TEGVLKLADFGLARSFGSPV---RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF  189 (283)
T ss_pred             eecCcCHHHEEEC-------CCCcEEEeeeeeeEecCCCc---ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHH
Confidence            6999999999999       88999999999998765432   1123457888999999987654689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.+|.+.+..+++..+...++.+.+..+...... ........+...........+.++.++.++|.+||..||
T Consensus       190 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  268 (283)
T cd05118         190 AELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL-ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDP  268 (283)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh-hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCc
Confidence            9999999999999999999999999998888776654431 111111222223333344456678999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+||++++++.||||
T Consensus       269 ~~Rp~~~~ll~~~~~  283 (283)
T cd05118         269 HKRITAEQALAHPYF  283 (283)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=5.9e-26  Score=195.82  Aligned_cols=163  Identities=44%  Similarity=0.762  Sum_probs=131.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.......   ......++..|+|||.+.+...++.++|+||+||++
T Consensus       120 ~H~~l~~~ni~~~-------~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l  189 (282)
T cd07829         120 LHRDLKPQNILIN-------RDGVLKLADFGLARAFGIPLR---TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIF  189 (282)
T ss_pred             ccCCCChheEEEc-------CCCCEEEecCCcccccCCCcc---ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHH
Confidence            6999999999999       889999999999987644321   123446678899999987654689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +++++|+++|.+.+..+.+..+.+.++.+....+.......  .+....+..........++..+..+.++|.+||..||
T Consensus       190 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  267 (282)
T cd07829         190 AEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP--DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNP  267 (282)
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc--cccccccccCccchHHhcccccHHHHHHHHHhhccCc
Confidence            99999999999999999999999999988887776543322  1222233333344445566678999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+||++++++.||||
T Consensus       268 ~~Rp~~~~~l~~p~~  282 (282)
T cd07829         268 AKRISAKEALKHPYF  282 (282)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0589|consensus

Probab=99.93  E-value=6.5e-27  Score=205.51  Aligned_cols=138  Identities=30%  Similarity=0.496  Sum_probs=122.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||+.||+++       +++.|||+|||+|+...+..   +...+++||+.|++||++. +..|+.++||||+||++
T Consensus       128 LHRDlK~~Niflt-------k~~~VkLgDfGlaK~l~~~~---~~a~tvvGTp~YmcPEil~-d~pYn~KSDiWsLGC~~  196 (426)
T KOG0589|consen  128 LHRDLKCANIFLT-------KDKKVKLGDFGLAKILNPED---SLASTVVGTPYYMCPEILS-DIPYNEKSDIWSLGCCL  196 (426)
T ss_pred             hcccchhhhhhcc-------ccCceeecchhhhhhcCCch---hhhheecCCCcccCHHHhC-CCCCCccCcchhhcchH
Confidence            6999999999999       99999999999999987653   2357789999999999875 57799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++-++.|.+.+......+|......|.+.                              ..+.+++.+++.||..+|
T Consensus       197 yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~------------------------------~ys~el~~lv~~~l~~~P  246 (426)
T KOG0589|consen  197 YEMCTLKPAFKASNMSELILKINRGLYSPLPS------------------------------MYSSELRSLVKSMLRKNP  246 (426)
T ss_pred             HHHHhcccccCccchHHHHHHHhhccCCCCCc------------------------------cccHHHHHHHHHHhhcCC
Confidence            99999999999999999999998877666553                              346899999999999999


Q ss_pred             CCCCCHHHHhcCCcccccc
Q psy7274         166 HKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~  184 (308)
                      ..||++.++|.+|.+..+.
T Consensus       247 ~~RPsa~~LL~~P~l~~~~  265 (426)
T KOG0589|consen  247 EHRPSALELLRRPHLLRYL  265 (426)
T ss_pred             ccCCCHHHHhhChhhhhHH
Confidence            9999999999999887543

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.9e-26  Score=213.72  Aligned_cols=139  Identities=22%  Similarity=0.393  Sum_probs=111.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++....... .......+||..|+|||++.+ ..++.++||||+||++
T Consensus       165 iHrDLKP~NILl~-------~~~~vkL~DFGls~~~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvil  235 (496)
T PTZ00283        165 IHRDIKSANILLC-------SNGLVKLGDFGFSKMYAATVS-DDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLL  235 (496)
T ss_pred             ecCCCCHHHEEEe-------CCCCEEEEecccCeecccccc-ccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999987643221 111345689999999999865 5599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+..+.+..+.....                              ..+.+..++++.+++.+||..||
T Consensus       236 yeLltG~~Pf~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~~L~~dP  285 (496)
T PTZ00283        236 YELLTLKRPFDGENMEEVMHKTLAGRY------------------------------DPLPPSISPEMQEIVTALLSSDP  285 (496)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHhcCCC------------------------------CCCCCCCCHHHHHHHHHHcccCh
Confidence            999999999988776555544432110                              01123567899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+||++.++++|||++.+
T Consensus       286 ~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        286 KRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             hhCcCHHHHHhCHHHHHh
Confidence            999999999999998754

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.6e-27  Score=209.37  Aligned_cols=137  Identities=24%  Similarity=0.434  Sum_probs=108.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+...++.++||||+||++
T Consensus       118 vHrDlkp~Nili~-------~~~~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil  187 (330)
T cd05586         118 VYRDLKPENILLD-------ATGHIALCDFGLSKANLTDN---KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV  187 (330)
T ss_pred             EeccCCHHHeEEC-------CCCCEEEecCCcCcCCCCCC---CCccCccCCccccCHHHHcCCCCCCCccceeccccEE
Confidence            6999999999999       88999999999997543221   1134568999999999987655689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.....                          ..+    ...++.++.+||.+||..||
T Consensus       188 ~elltG~~Pf~~~~~~~~~~~i~~~~~--------------------------~~~----~~~~~~~~~~li~~~L~~~P  237 (330)
T cd05586         188 FEMCCGWSPFYAEDTQQMYRNIAFGKV--------------------------RFP----KNVLSDEGRQFVKGLLNRNP  237 (330)
T ss_pred             EEeccCCCCCCCCCHHHHHHHHHcCCC--------------------------CCC----CccCCHHHHHHHHHHcCCCH
Confidence            999999999988776554444321100                          000    01357899999999999999


Q ss_pred             CCCC----CHHHHhcCCcccc
Q psy7274         166 HKRI----GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~----t~~eil~hp~f~~  182 (308)
                      .+|+    +++++++||||..
T Consensus       238 ~~R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         238 QHRLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             HHCCCCCCCHHHHhcCccccC
Confidence            9998    6899999999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.93  E-value=1.2e-26  Score=209.06  Aligned_cols=144  Identities=29%  Similarity=0.436  Sum_probs=105.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC--------------------------------------
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD--------------------------------------   46 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~--------------------------------------   46 (308)
                      -.||||||+||||+       .++++||+|||+++.......                                      
T Consensus       122 ivHrDlKp~Nili~-------~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (381)
T cd05626         122 FIHRDIKPDNILID-------LDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQ  194 (381)
T ss_pred             eeecCCcHHHEEEC-------CCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhc
Confidence            37999999999999       889999999999864321000                                      


Q ss_pred             ------CCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHh
Q psy7274          47 ------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLS  120 (308)
Q Consensus        47 ------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~  120 (308)
                            ........+||..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+....+...     
T Consensus       195 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-----  268 (381)
T cd05626         195 RATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLH-----  268 (381)
T ss_pred             cccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccC-----
Confidence                  0001134689999999999864 5689999999999999999999999988776555444432111000     


Q ss_pred             hhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc--CCCCCCCHHHHhcCCccccc
Q psy7274         121 CIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF--NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~--dP~~R~t~~eil~hp~f~~~  183 (308)
                                   .+         ....+++++++||.+|+..  ++..|++++++++||||+..
T Consensus       269 -------------~~---------~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         269 -------------IP---------PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             -------------CC---------CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence                         00         0124689999999997655  44459999999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.93  E-value=7.5e-27  Score=210.45  Aligned_cols=142  Identities=31%  Similarity=0.502  Sum_probs=106.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC---------------------------------------
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD---------------------------------------   46 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~---------------------------------------   46 (308)
                      .||||||+|||++       .++.+||+|||+|+.......                                       
T Consensus       123 vHrDlKp~NILl~-------~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (382)
T cd05625         123 IHRDIKPDNILID-------RDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERR  195 (382)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence            6999999999999       899999999999864321000                                       


Q ss_pred             -----CCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhh
Q psy7274          47 -----HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSC  121 (308)
Q Consensus        47 -----~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~  121 (308)
                           ........+||+.|+|||++.+ ..++.++||||+||++|||++|++||.+.+..+....+........      
T Consensus       196 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~------  268 (382)
T cd05625         196 AARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLH------  268 (382)
T ss_pred             hccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcC------
Confidence                 0001124579999999999865 5699999999999999999999999998876655544432111000      


Q ss_pred             hhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCC---HHHHhcCCccccc
Q psy7274         122 IINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG---VEDALAHPYLEQY  183 (308)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t---~~eil~hp~f~~~  183 (308)
                                        .+   ....+++++.++|.+|+ .+|.+|++   ++++++||||+..
T Consensus       269 ------------------~p---~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         269 ------------------IP---PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             ------------------CC---CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence                              00   01246899999999986 59999997   9999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.93  E-value=5.5e-26  Score=198.74  Aligned_cols=167  Identities=34%  Similarity=0.554  Sum_probs=121.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+||+++       .++.+||+|||++......... .......+++..|+|||.+.+...++.++|+||+||+
T Consensus       141 ~H~dl~p~nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  213 (310)
T cd07865         141 LHRDMKAANILIT-------KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI  213 (310)
T ss_pred             eccCCCHHHEEEC-------CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHH
Confidence            6999999999999       8899999999999866433211 1122445788899999988765557899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCC--CCccccCCCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPK--VPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++|++|+++|.+.+....+..+....|..++..+............ ..+....  .+........+..+.+||.+||.
T Consensus       214 l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~  292 (310)
T cd07865         214 MAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKM-ELPQGQKRKVKERLKPYVKDPHALDLIDKLLV  292 (310)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhc-cCCCccchhhHHhcccccCCHHHHHHHHHHhc
Confidence            99999999999999888888888888887766554433211111100 0111000  00000111246788999999999


Q ss_pred             cCCCCCCCHHHHhcCCcc
Q psy7274         163 FNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f  180 (308)
                      .||.+|||++++++||||
T Consensus       293 ~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         293 LDPAKRIDADTALNHDFF  310 (310)
T ss_pred             CChhhccCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.93  E-value=4.8e-26  Score=197.56  Aligned_cols=164  Identities=36%  Similarity=0.694  Sum_probs=121.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++........   .....++..|+|||++.+...++.++||||+||++
T Consensus       125 ~H~dl~p~nil~~-------~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il  194 (291)
T cd07844         125 LHRDLKPQNLLIS-------ERGELKLADFGLARAKSVPSKT---YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIF  194 (291)
T ss_pred             ecccCCHHHEEEc-------CCCCEEECccccccccCCCCcc---ccccccccccCCcHHhhcCcccCcHHHHHHHHHHH
Confidence            7999999999999       8899999999998764322111   12335788999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCC-HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCC--hhHHHHHHHhcc
Q psy7274          86 AEMISNRPIFPGKH-YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD--PNALDLLGKMLT  162 (308)
Q Consensus        86 ~ell~g~~pf~~~~-~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~ll~~~L~  162 (308)
                      ++|++|+.+|.+.. ..+++..+...++.+.+..+.......... ..........+.....+..+  ..+.+++.+||+
T Consensus       195 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  273 (291)
T cd07844         195 YEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK-PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQ  273 (291)
T ss_pred             HHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc-cccccccCChhHHHhCcCCCCchhHHHHHHHHhc
Confidence            99999999998766 667788888888888777665443211000 00011111122222333445  889999999999


Q ss_pred             cCCCCCCCHHHHhcCCcc
Q psy7274         163 FNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f  180 (308)
                      .+|.+|||+.++++||||
T Consensus       274 ~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         274 YEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cCcccccCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.93  E-value=7.5e-26  Score=195.73  Aligned_cols=165  Identities=35%  Similarity=0.654  Sum_probs=121.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       +++.+||+|||++.......   ...+...++.+|+|||++.+...++.++||||+||+
T Consensus       121 i~h~~l~p~ni~~~-------~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~  190 (286)
T cd07846         121 IIHRDIKPENILVS-------QSGVVKLCDFGFARTLAAPG---EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCL  190 (286)
T ss_pred             ccccCCCHHHEEEC-------CCCcEEEEeeeeeeeccCCc---cccCcccceeeccCcHHhccccccCchHhHHHHHHH
Confidence            36999999999999       89999999999998764432   113456789999999998755557889999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC-CCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF-KPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++|+++|.+....+.+..+....+................... ..+. ....+.....+.++..+.+|+.+||..
T Consensus       191 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  269 (286)
T cd07846         191 VTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM-RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRI  269 (286)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc-ccccccCcchHHHhCCCcCHHHHHHHHHHhcC
Confidence            99999999999998888888888777665443221111100000000 0010 111122234567789999999999999


Q ss_pred             CCCCCCCHHHHhcCCcc
Q psy7274         164 NPHKRIGVEDALAHPYL  180 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f  180 (308)
                      +|.+|||+.++++||||
T Consensus       270 ~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         270 DPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CcccchhHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.5e-26  Score=208.05  Aligned_cols=142  Identities=26%  Similarity=0.397  Sum_probs=105.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC------------C------------------------
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH------------T------------------------   48 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~------------~------------------------   48 (308)
                      -.||||||+|||++       .++.+||+|||+|+........            .                        
T Consensus       122 ivHrDlkp~NIll~-------~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (377)
T cd05629         122 FIHRDIKPDNILID-------RGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQI  194 (377)
T ss_pred             eeccCCCHHHEEEC-------CCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence            37999999999999       8899999999999643210000            0                        


Q ss_pred             --------CCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHh
Q psy7274          49 --------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLS  120 (308)
Q Consensus        49 --------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~  120 (308)
                              ......+||+.|+|||++.+ ..++.++||||+||++|||++|.+||.+.+..+.+..+.......      
T Consensus       195 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~------  267 (377)
T cd05629         195 ATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL------  267 (377)
T ss_pred             hhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc------
Confidence                    00013579999999999864 569999999999999999999999998887766665554321100      


Q ss_pred             hhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCC---CCHHHHhcCCcccc
Q psy7274         121 CIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKR---IGVEDALAHPYLEQ  182 (308)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R---~t~~eil~hp~f~~  182 (308)
                                    .      +. -...++.++.+||.+||. +|.+|   +|+.++++||||+.
T Consensus       268 --------------~------~p-~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         268 --------------Y------FP-DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             --------------C------CC-CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence                          0      00 001357899999999998 77775   59999999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=4.3e-26  Score=203.62  Aligned_cols=164  Identities=24%  Similarity=0.301  Sum_probs=108.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......    ......||..|+|||++.+ ..++.++||||+||++
T Consensus       179 vHrDlkp~Nill~-------~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl  246 (357)
T PHA03209        179 IHRDVKTENIFIN-------DVDQVCIGDLGAAQFPVVAP----AFLGLAGTVETNAPEVLAR-DKYNSKADIWSAGIVL  246 (357)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEecCccccccccCc----ccccccccccccCCeecCC-CCCCchhhHHHHHHHH
Confidence            6999999999999       88999999999997543221    1234579999999999865 4599999999999999


Q ss_pred             HHHhhCC-CCCCCCC---------HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccc----cCCCCCh
Q psy7274          86 AEMISNR-PIFPGKH---------YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI----LYPNADP  151 (308)
Q Consensus        86 ~ell~g~-~pf~~~~---------~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~  151 (308)
                      |||+++. ++|.+..         ...++..+...++..+..............+..... ....++..    ...+++.
T Consensus       247 ~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  325 (357)
T PHA03209        247 FEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYAS-LERQPYTRYPCFQRVNLPI  325 (357)
T ss_pred             HHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcc-cCCCcccccHHHhccCCCc
Confidence            9999854 4554322         123344444444443322111000011111111100 00111110    0124577


Q ss_pred             hHHHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       152 ~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ++.+||.+||+.||.+||||.|+|+||||++
T Consensus       326 ~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        326 DGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             hHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            8899999999999999999999999999975

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=2.6e-26  Score=198.32  Aligned_cols=139  Identities=22%  Similarity=0.339  Sum_probs=106.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++........   .....||..|+|||++.+ ..++.++|+||+||+
T Consensus       118 i~H~dlkp~Nili~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG~i  186 (280)
T cd05608         118 IIYRDLKPENVLLD-------NDGNVRISDLGLAVELKDGQSK---TKGYAGTPGFMAPELLQG-EEYDFSVDYFALGVT  186 (280)
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEeeCccceecCCCCcc---ccccCCCcCccCHHHhcC-CCCCccccHHHHHHH
Confidence            37999999999999       8899999999999866433211   234588999999999865 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|+|++|+.||.+.........+.. ....+                            .......+..+.+++.+||+.
T Consensus       187 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~  238 (280)
T cd05608         187 LYEMIAARGPFRARGEKVENKELKQRILNDS----------------------------VTYPDKFSPASKSFCEALLAK  238 (280)
T ss_pred             HHHHHhCCCCCCCCCcchhHHHHHHhhcccC----------------------------CCCcccCCHHHHHHHHHHhcC
Confidence            9999999999976543221111111 00000                            011234678999999999999


Q ss_pred             CCCCCC-----CHHHHhcCCcccc
Q psy7274         164 NPHKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       164 dP~~R~-----t~~eil~hp~f~~  182 (308)
                      ||++|+     |++++++||||+.
T Consensus       239 ~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         239 DPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             CHHHhcCCCCCCHHHHhcChhhhc
Confidence            999999     8899999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=5.1e-26  Score=211.30  Aligned_cols=166  Identities=28%  Similarity=0.300  Sum_probs=113.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.+......  .....+||..|+|||++.+ ..++.++||||+||++
T Consensus       289 iHrDLKP~NILl~-------~~~~vkL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  358 (501)
T PHA03210        289 IHRDIKLENIFLN-------CDGKIVLGDFGTAMPFEKEREA--FDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLIL  358 (501)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEEeCCCceecCccccc--ccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHH
Confidence            6999999999998       8899999999999876543221  1234689999999999865 5699999999999999


Q ss_pred             HHHhhCCCC-CCC--CCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCC-CCCCcccc--CCCCChhHHHHHHH
Q psy7274          86 AEMISNRPI-FPG--KHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFK-PKVPWEIL--YPNADPNALDLLGK  159 (308)
Q Consensus        86 ~ell~g~~p-f~~--~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~ll~~  159 (308)
                      |||++|..+ +.+  .....++..+...++.+..+ +... ..+...++...... ....+..+  ....+.++.++|.+
T Consensus       359 ~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~k  436 (501)
T PHA03210        359 LDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEE-FPDP-PCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVK  436 (501)
T ss_pred             HHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhh-cCCc-HHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHH
Confidence            999998754 432  34456666666655543222 1110 01111222111100 00000000  11356788999999


Q ss_pred             hcccCCCCCCCHHHHhcCCccccc
Q psy7274         160 MLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||++||.+|||+.|+|+||||...
T Consensus       437 mL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        437 MLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             HhccCcccCcCHHHHhhChhhhcC
Confidence            999999999999999999999763

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.93  E-value=2.1e-26  Score=205.35  Aligned_cols=141  Identities=23%  Similarity=0.245  Sum_probs=104.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++..    +...+.++||||+
T Consensus       190 vHrDlkp~NIll~-------~~~~~kL~DfG~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dvwsl  259 (353)
T PLN00034        190 VHRDIKPSNLLIN-------SAKNVKIADFGVSRILAQTMD---PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSL  259 (353)
T ss_pred             eecCCCHHHEEEc-------CCCCEEEcccccceecccccc---cccccccCccccCccccccccccCcCCCcchhHHHH
Confidence            6999999999999       889999999999987643221   1245689999999998742    2234568999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|||++|+.||......+....+.......                      .     .......+.++.+||.+||
T Consensus       260 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------------------~-----~~~~~~~~~~l~~li~~~l  312 (353)
T PLN00034        260 GVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ----------------------P-----PEAPATASREFRHFISCCL  312 (353)
T ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC----------------------C-----CCCCCccCHHHHHHHHHHc
Confidence            999999999999997433221111111110000                      0     0112346789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ..||++|||+.|+++||||...
T Consensus       313 ~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        313 QREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             cCChhhCcCHHHHhcCcccccC
Confidence            9999999999999999999764

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=1.4e-26  Score=204.12  Aligned_cols=135  Identities=25%  Similarity=0.427  Sum_probs=108.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       118 vH~dikp~NIll~-------~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il  186 (323)
T cd05575         118 IYRDLKPENILLD-------SQGHVVLTDFGLCKEGIEHS---KTTSTFCGTPEYLAPEVLRK-QPYDRTVDWWCLGAVL  186 (323)
T ss_pred             EeCCCCHHHeEEC-------CCCcEEEeccCCCcccccCC---CccccccCChhhcChhhhcC-CCCCccccccccchhh
Confidence            6999999999999       89999999999987543221   11345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|..||.+.+..+....+...   +                            ..+.+..+..+.++|.+||+.||
T Consensus       187 ~ell~g~~pf~~~~~~~~~~~i~~~---~----------------------------~~~~~~~~~~~~~li~~~l~~~p  235 (323)
T cd05575         187 YEMLYGLPPFYSRDTAEMYDNILNK---P----------------------------LRLKPNISVSARHLLEGLLQKDR  235 (323)
T ss_pred             hhhhcCCCCCCCCCHHHHHHHHHcC---C----------------------------CCCCCCCCHHHHHHHHHHhhcCH
Confidence            9999999999887765555444321   0                            01123568899999999999999


Q ss_pred             CCCCCH----HHHhcCCcccc
Q psy7274         166 HKRIGV----EDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~----~eil~hp~f~~  182 (308)
                      .+|+++    .+++.||||..
T Consensus       236 ~~R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         236 TKRLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             HhCCCCCCCHHHHHcCCCcCC
Confidence            999997    69999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=8.3e-26  Score=196.40  Aligned_cols=167  Identities=38%  Similarity=0.692  Sum_probs=126.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++.      .++.+||+|||++........   ..+..+++..|+|||++.+...++.++|+||+||++
T Consensus       124 ~H~dl~p~nill~~------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~  194 (294)
T PLN00009        124 LHRDLKPQNLLIDR------RTNALKLADFGLARAFGIPVR---TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIF  194 (294)
T ss_pred             eCCCCCcceEEEEC------CCCEEEEcccccccccCCCcc---ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            69999999999971      345799999999976543211   124457889999999987655688999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+..+.+..+....+.|....+......  ..+....+...........+..++.+.+++.+||..+|
T Consensus       195 ~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  272 (294)
T PLN00009        195 AEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL--PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDP  272 (294)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc--hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCCh
Confidence            9999999999998888888888888888776655432211  11111122222222333446678999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+||+++++++||||...
T Consensus       273 ~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        273 SKRITARAALEHEYFKDL  290 (294)
T ss_pred             hhCcCHHHHhcCchHhHH
Confidence            999999999999999764

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.93  E-value=4.1e-26  Score=204.70  Aligned_cols=141  Identities=23%  Similarity=0.318  Sum_probs=107.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC---CCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK---GYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiWSlG   82 (308)
                      .||||||+|||++       .++.+||+|||+|+........  .....+||+.|+|||++.+..   .++.++||||+|
T Consensus       164 vHrDLkp~NIll~-------~~~~ikL~DfG~a~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlG  234 (371)
T cd05622         164 IHRDVKPDNMLLD-------KSGHLKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (371)
T ss_pred             EeCCCCHHHEEEC-------CCCCEEEEeCCceeEcCcCCcc--cccCcccCccccCHHHHhccCCCccCCCccceeehh
Confidence            6999999999999       8999999999999876432211  124568999999999986432   378999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++|||++|+.||.+.+....+..+........                          +. ....++..+.+||.+||.
T Consensus       235 vilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--------------------------~~-~~~~~s~~~~~li~~~L~  287 (371)
T cd05622         235 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT--------------------------FP-DDNDISKEAKNLICAFLT  287 (371)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc--------------------------CC-CcCCCCHHHHHHHHHHcC
Confidence            999999999999998887666655543211100                          00 012468999999999998


Q ss_pred             cCCCC--CCCHHHHhcCCcccc
Q psy7274         163 FNPHK--RIGVEDALAHPYLEQ  182 (308)
Q Consensus       163 ~dP~~--R~t~~eil~hp~f~~  182 (308)
                      .++.+  |++++++++|+||+.
T Consensus       288 ~~~~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         288 DREVRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             ChhhhcCCCCHHHHhcCcccCC
Confidence            44433  779999999999976

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.93  E-value=1.7e-26  Score=206.51  Aligned_cols=141  Identities=28%  Similarity=0.459  Sum_probs=106.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC--------------------------------CCCccC
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH--------------------------------TGFLTE   53 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~--------------------------------~~~~~~   53 (308)
                      .||||||+|||++       .++.+||+|||+|+........                                ......
T Consensus       123 vHrDLkp~NIli~-------~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (360)
T cd05627         123 IHRDIKPDNLLLD-------AKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYS  195 (360)
T ss_pred             EccCCCHHHEEEC-------CCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccc
Confidence            6999999999999       8999999999998754321100                                001124


Q ss_pred             cccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhc
Q psy7274          54 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQS  133 (308)
Q Consensus        54 ~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  133 (308)
                      .+||+.|+|||++.+ ..++.++||||+||++|||++|++||.+.+....+..+.......                   
T Consensus       196 ~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~-------------------  255 (360)
T cd05627         196 TVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETL-------------------  255 (360)
T ss_pred             cCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCce-------------------
Confidence            589999999999865 569999999999999999999999999887766655554211100                   


Q ss_pred             CCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCC---HHHHhcCCcccc
Q psy7274         134 LPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG---VEDALAHPYLEQ  182 (308)
Q Consensus       134 ~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t---~~eil~hp~f~~  182 (308)
                       ....       ....+.++++||.+|+. ||.+|++   ++++++||||+.
T Consensus       256 -~~p~-------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         256 -VFPP-------EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             -ecCC-------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence             0000       01357899999999874 9999984   899999999976

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=4.4e-26  Score=201.38  Aligned_cols=139  Identities=21%  Similarity=0.392  Sum_probs=102.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       118 vH~Dikp~Nili~-------~~~~~kL~DfG~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  186 (329)
T cd05618         118 IYRDLKLDNVLLD-------SEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLM  186 (329)
T ss_pred             eeCCCCHHHEEEC-------CCCCEEEeeCCccccccCCCC---ccccccCCccccCHHHHcC-CCCCCccceecccHHH
Confidence            6999999999999       899999999999975432211   1345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHH-----HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          86 AEMISNRPIFPGKHYL-----DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~-----~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      |+|++|+.||......     .....+...                   ...   ...     .+....+..+.+||.+|
T Consensus       187 ~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------------------i~~---~~~-----~~p~~~~~~~~~ll~~~  239 (329)
T cd05618         187 FEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-------------------ILE---KQI-----RIPRSLSVKAASVLKSF  239 (329)
T ss_pred             HHHhhCCCCCccCCCcCCcccccHHHHHHH-------------------Hhc---CCC-----CCCCCCCHHHHHHHHHH
Confidence            9999999999532100     000000000                   000   000     11235678999999999


Q ss_pred             cccCCCCCCC------HHHHhcCCcccc
Q psy7274         161 LTFNPHKRIG------VEDALAHPYLEQ  182 (308)
Q Consensus       161 L~~dP~~R~t------~~eil~hp~f~~  182 (308)
                      |..||.+|+|      ++++++||||+.
T Consensus       240 L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         240 LNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             hcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            9999999998      479999999976

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=6.5e-26  Score=199.80  Aligned_cols=136  Identities=23%  Similarity=0.393  Sum_probs=108.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       123 vHrDikp~Nill~-------~~~~ikL~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil  191 (323)
T cd05615         123 IYRDLKLDNVMLD-------SEGHIKIADFGMCKEHMVDGV---TTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLL  191 (323)
T ss_pred             eccCCCHHHeEEC-------CCCCEEEeccccccccCCCCc---cccCccCCccccCHHHHcC-CCCCCccchhhhHHHH
Confidence            6999999999999       899999999999986432211   1234579999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+.......+.....                               ......+.++.+++.+||+.+|
T Consensus       192 ~elltG~~pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~~~~~~~li~~~l~~~p  240 (323)
T cd05615         192 YEMLAGQPPFDGEDEDELFQSIMEHNV-------------------------------SYPKSLSKEAVSICKGLMTKHP  240 (323)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------------------CCCccCCHHHHHHHHHHcccCH
Confidence            999999999998876665555442110                               0112457899999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~  183 (308)
                      .+|++     .+++++||||+..
T Consensus       241 ~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         241 SKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             hhCCCCCCCCHHHHhcCcccCCC
Confidence            99997     4789999999763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=7.6e-26  Score=195.80  Aligned_cols=166  Identities=34%  Similarity=0.654  Sum_probs=122.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........  ......+++.+|+|||++.+...++.++|+||+||++
T Consensus       122 ~H~dl~~~ni~~~-------~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l  192 (288)
T cd07833         122 IHRDIKPENILVS-------ESGVLKLCDFGFARALRARPA--SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIM  192 (288)
T ss_pred             ecCCCCHHHeEEC-------CCCCEEEEeeecccccCCCcc--ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHH
Confidence            6999999999999       899999999999987654322  1234568899999999987654689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCC-CChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN-ADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+++|.+.+..+.+..+...++...+.............-...........+...++. ++.++.+||.+||..+
T Consensus       193 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  272 (288)
T cd07833         193 AELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMD  272 (288)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccC
Confidence            999999999999888888888877777666643332211000000000000001111122233 4889999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |++|||++++++||||
T Consensus       273 p~~Rps~~~il~~~~f  288 (288)
T cd07833         273 PKERLTCDELLQHPYF  288 (288)
T ss_pred             chhcccHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=2.9e-26  Score=202.26  Aligned_cols=135  Identities=25%  Similarity=0.430  Sum_probs=109.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......   ......+||..|+|||++.+ ..++.++||||+||++
T Consensus       118 iHrDlkp~Nili~-------~~~~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  186 (325)
T cd05602         118 VYRDLKPENILLD-------SQGHIVLTDFGLCKENIEHN---GTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVL  186 (325)
T ss_pred             EecCCCHHHeEEC-------CCCCEEEccCCCCcccccCC---CCcccccCCccccCHHHHcC-CCCCCccccccccHHH
Confidence            6999999999998       88999999999997543221   11345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.....                               ...+.++..+.++|.+||+.||
T Consensus       187 ~el~~g~~pf~~~~~~~~~~~i~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p  235 (325)
T cd05602         187 YEMLYGLPPFYSRNTAEMYDNILNKPL-------------------------------QLKPNITNSARHLLEGLLQKDR  235 (325)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHhCCc-------------------------------CCCCCCCHHHHHHHHHHcccCH
Confidence            999999999998876665554432100                               1123568899999999999999


Q ss_pred             CCCCCHH----HHhcCCcccc
Q psy7274         166 HKRIGVE----DALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~----eil~hp~f~~  182 (308)
                      .+|+++.    ++++|+||..
T Consensus       236 ~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         236 TKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             HHCCCCCCCHHHHhcCcccCC
Confidence            9999875    8999999964

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=5.8e-26  Score=210.06  Aligned_cols=139  Identities=22%  Similarity=0.349  Sum_probs=111.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+....... .......+||+.|+|||++.+ ..++.++||||+||++
T Consensus       191 vHrDlkp~NIll~-------~~~~~kL~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l  261 (478)
T PTZ00267        191 MHRDLKSANIFLM-------PTGIIKLGDFGFSKQYSDSVS-LDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVIL  261 (478)
T ss_pred             EECCcCHHhEEEC-------CCCcEEEEeCcCceecCCccc-cccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHH
Confidence            6999999999999       889999999999987653321 112345689999999998864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+......+                              ....++.++.++|.+||..||
T Consensus       262 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~------------------------------~~~~~s~~~~~li~~~L~~dP  311 (478)
T PTZ00267        262 YELLTLHRPFKGPSQREIMQQVLYGKYDP------------------------------FPCPVSSGMKALLDPLLSKNP  311 (478)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCC------------------------------CCccCCHHHHHHHHHHhccCh
Confidence            99999999998877666555543211111                              012457899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ++|||+++++.|+|++..
T Consensus       312 ~~Rps~~~~l~~~~~~~~  329 (478)
T PTZ00267        312 ALRPTTQQLLHTEFLKYV  329 (478)
T ss_pred             hhCcCHHHHHhCHHHHHH
Confidence            999999999999998653

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.93  E-value=7e-26  Score=200.37  Aligned_cols=143  Identities=21%  Similarity=0.341  Sum_probs=108.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||+|.........  .....+||+.|+|||++.+    ...++.++||||+
T Consensus       124 iHrDlkp~Nili~-------~~~~~kL~DfG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSl  194 (332)
T cd05623         124 VHRDIKPDNILMD-------MNGHIRLADFGSCLKLMEDGTV--QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSL  194 (332)
T ss_pred             EecCCCHHHEEEC-------CCCCEEEeecchheecccCCcc--eecccccCccccCHHHHhccccCCCCCCCcCCEEee
Confidence            6999999999998       8899999999999765432211  1234579999999999862    3458899999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|||++|+.||.+.+..+.+..+.....                          ..++......++.++.+||++||
T Consensus       195 Gvil~ell~g~~Pf~~~~~~~~~~~i~~~~~--------------------------~~~~p~~~~~~s~~~~~li~~ll  248 (332)
T cd05623         195 GVCMYEMLYGETPFYAESLVETYGKIMNHKE--------------------------RFQFPAQVTDVSEDAKDLIRRLI  248 (332)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc--------------------------cccCCCccccCCHHHHHHHHHHc
Confidence            9999999999999998877666655542110                          00111112356899999999999


Q ss_pred             ccCCCC--CCCHHHHhcCCccccc
Q psy7274         162 TFNPHK--RIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~--R~t~~eil~hp~f~~~  183 (308)
                      ..++.+  |++++++++||||...
T Consensus       249 ~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         249 CSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             cChhhhcCCCCHHHHhCCCCcCCC
Confidence            775554  6899999999999763

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=1.7e-25  Score=198.19  Aligned_cols=170  Identities=32%  Similarity=0.622  Sum_probs=128.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC-----------CCCCCccCcccccccchhhHhhCCCCCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH-----------DHTGFLTEYVATRWYRAPEIMLNSKGYT   73 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~-----------~~~~~~~~~~gt~~y~aPE~l~~~~~~~   73 (308)
                      -.||||||+||+++       .++.+||+|||+++......           ..........++..|+|||.+.+...++
T Consensus       140 i~H~dl~~~nill~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  212 (335)
T PTZ00024        140 FMHRDLSPANIFIN-------SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYH  212 (335)
T ss_pred             eecccccHHHeEEC-------CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCC
Confidence            37999999999999       88999999999998654111           0111123446788999999987655579


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      .++|+||+||++++|++|++||.+.+..+++..+...++.|....+.......  .+. .........+....+..+.++
T Consensus       213 ~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~  289 (335)
T PTZ00024        213 FAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLP--LYT-EFTPRKPKDLKTIFPNASDDA  289 (335)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcc--ccc-ccCcCCcccHHHhCcCCChHH
Confidence            99999999999999999999999999999999999988888776554321100  000 000111122233445678899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCcccccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~  184 (308)
                      .++|.+||..+|++|+|+++++.||||+...
T Consensus       290 ~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        290 IDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             HHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence            9999999999999999999999999998753

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.93  E-value=2.5e-25  Score=193.13  Aligned_cols=163  Identities=31%  Similarity=0.618  Sum_probs=117.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........   ....+++..|+|||++.+...++.++|+||+||++
T Consensus       125 ~H~dlkp~Nil~~-------~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l  194 (291)
T cd07870         125 LHRDLKPQNLLIS-------YLGELKLADFGLARAKSIPSQT---YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIF  194 (291)
T ss_pred             ccCCCChHHEEEc-------CCCcEEEeccccccccCCCCCC---CCCccccccccCCceeecCCCCCcHHHHHHHHHHH
Confidence            7999999999998       8899999999999864332111   23346789999999986555688999999999999


Q ss_pred             HHHhhCCCCCCCCC-HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhc-CCCCCCCCccccCC--CCChhHHHHHHHhc
Q psy7274          86 AEMISNRPIFPGKH-YLDQLNHILGILGSPTPEDLSCIINEKARSYLQS-LPFKPKVPWEILYP--NADPNALDLLGKML  161 (308)
Q Consensus        86 ~ell~g~~pf~~~~-~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~s~~~~~ll~~~L  161 (308)
                      ++|++|..||.+.+ ..+++..+...+|.|....+.......  .+... .+............  ..+.++.+++.+||
T Consensus       195 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l  272 (291)
T cd07870         195 IEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP--NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQML  272 (291)
T ss_pred             HHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc--cccchhccccCCcchhhhccccCCChHHHHHHHHHh
Confidence            99999999997654 346677777778877766554332110  11000 00111111111111  12578999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      ..||.+|||+.+++.||||
T Consensus       273 ~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         273 MMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             CcCcccCcCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=6.3e-26  Score=200.39  Aligned_cols=144  Identities=20%  Similarity=0.369  Sum_probs=102.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++|+||+||++
T Consensus       118 vH~dlkp~Nili~-------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l  186 (329)
T cd05588         118 IYRDLKLDNVLLD-------AEGHIKLTDYGMCKEGIRPG---DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLM  186 (329)
T ss_pred             EecCCCHHHeEEC-------CCCCEEECcCccccccccCC---CccccccCCccccCHHHHcC-CCCCCccceechHHHH
Confidence            6999999999999       88999999999997532211   11345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||......+          .+........     .......  ..     .+...++..+.++|.+||+.||
T Consensus       187 ~el~~g~~Pf~~~~~~~----------~~~~~~~~~~-----~~~~~~~--~~-----~~p~~~~~~~~~li~~~L~~dP  244 (329)
T cd05588         187 FEMMAGRSPFDIVGMSD----------NPDQNTEDYL-----FQVILEK--QI-----RIPRSLSVKASSVLKGFLNKDP  244 (329)
T ss_pred             HHHHHCCCCcccccccc----------cccccchHHH-----HHHHHcC--CC-----CCCCCCCHHHHHHHHHHhccCH
Confidence            99999999996422100          0000000000     0000000  00     1123467899999999999999


Q ss_pred             CCCCC------HHHHhcCCcccc
Q psy7274         166 HKRIG------VEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t------~~eil~hp~f~~  182 (308)
                      .+|+|      ++++++||||..
T Consensus       245 ~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         245 KERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHcCCCCCCCCHHHHhcCCCCCC
Confidence            99997      789999999965

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=1.1e-25  Score=199.22  Aligned_cols=171  Identities=22%  Similarity=0.337  Sum_probs=112.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||++.......     ....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       126 vH~dlkp~Nili~-------~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il  192 (333)
T cd06650         126 MHRDVKPSNILVN-------SRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL  192 (333)
T ss_pred             EecCCChhhEEEc-------CCCCEEEeeCCcchhhhhhc-----cccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHH
Confidence            5999999999998       88999999999997653221     234578999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhh-------------------hhHHHHHHhhcCCCCCCCCcccc
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCI-------------------INEKARSYLQSLPFKPKVPWEIL  145 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  145 (308)
                      |+|++|+.||...........+.. ..+.+........                   .......+..... .+..    .
T Consensus       193 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~  267 (333)
T cd06650         193 VEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEP-PPKL----P  267 (333)
T ss_pred             HHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCC-CccC----C
Confidence            999999999987654333221110 1111110000000                   0000000000000 0000    0


Q ss_pred             CCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccccCCCCCCchhh
Q psy7274         146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWR  194 (308)
Q Consensus       146 ~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~~~~~~~~  194 (308)
                      ....+.++.+||.+||++||.+|||++|+++||||+...........|.
T Consensus       268 ~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~~~~~~~~~  316 (333)
T cd06650         268 SGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEAEEVDFAGWL  316 (333)
T ss_pred             CCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCccccccHHHHH
Confidence            1135688999999999999999999999999999987654443334443

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.93  E-value=3e-26  Score=202.16  Aligned_cols=136  Identities=26%  Similarity=0.456  Sum_probs=108.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+ ..++.++||||+||+
T Consensus       117 ivH~Dlkp~NIll~-------~~~~~kL~DfG~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~i  185 (325)
T cd05604         117 IVYRDLKPENILLD-------SQGHVVLTDFGLCKEGIAQSD---TTTTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGAV  185 (325)
T ss_pred             eeecCCCHHHeEEC-------CCCCEEEeecCCcccCCCCCC---CcccccCChhhCCHHHHcC-CCCCCcCccccccce
Confidence            36999999999999       899999999999875432211   1345689999999999865 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+..+.+..+....                               ....+..+..+.++|.+||..+
T Consensus       186 l~el~~G~~pf~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~ll~~ll~~~  234 (325)
T cd05604         186 LYEMLYGLPPFYCRDVAEMYDNILHKP-------------------------------LVLRPGASLTAWSILEELLEKD  234 (325)
T ss_pred             ehhhhcCCCCCCCCCHHHHHHHHHcCC-------------------------------ccCCCCCCHHHHHHHHHHhccC
Confidence            999999999998877655544443210                               0112356789999999999999


Q ss_pred             CCCCCCH----HHHhcCCcccc
Q psy7274         165 PHKRIGV----EDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~----~eil~hp~f~~  182 (308)
                      |.+|+++    .++++||||..
T Consensus       235 p~~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         235 RQRRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             HHhcCCCCCCHHHHhcCCCcCC
Confidence            9999986    58999999976

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG4279|consensus

Probab=99.93  E-value=7.9e-26  Score=204.20  Aligned_cols=141  Identities=25%  Similarity=0.447  Sum_probs=106.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~i   84 (308)
                      +|||||-+|+||+.      -.|.+||+|||.++.+..-..   ...++.||..|||||++-.+ ++|+.++||||+||+
T Consensus       697 VHRDIKGDNVLvNT------ySGvlKISDFGTsKRLAginP---~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT  767 (1226)
T KOG4279|consen  697 VHRDIKGDNVLVNT------YSGVLKISDFGTSKRLAGINP---CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCT  767 (1226)
T ss_pred             eeccccCCcEEEee------ccceEEecccccchhhccCCc---cccccccchhhhChHhhccCCcCCCchhhhhhccce
Confidence            69999999999984      468899999999987643222   23567899999999999644 679999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +.||.||++||..-.....  .++++ |                    ....-+.     +...+|.+++.||.+|+..|
T Consensus       768 ~vEMATGrPPF~ElgspqA--AMFkV-G--------------------myKvHP~-----iPeelsaeak~FilrcFepd  819 (1226)
T KOG4279|consen  768 MVEMATGRPPFVELGSPQA--AMFKV-G--------------------MYKVHPP-----IPEELSAEAKNFILRCFEPD  819 (1226)
T ss_pred             eEeeccCCCCeeecCChhH--hhhhh-c--------------------ceecCCC-----CcHHHHHHHHHHHHHHcCCC
Confidence            9999999999954321111  11110 0                    0000011     11246789999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+||+|.++|..||++.-
T Consensus       820 ~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  820 PCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             cccCccHHHhccCcccccC
Confidence            9999999999999999764

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=3e-25  Score=191.68  Aligned_cols=164  Identities=41%  Similarity=0.717  Sum_probs=127.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.++|+|||++........    .+..+++..|+|||++.+...++.++|+||+||+
T Consensus       120 i~H~dl~~~ni~i~-------~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~  188 (283)
T cd07830         120 FFHRDLKPENLLVS-------GPEVVKIADFGLAREIRSRPP----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCI  188 (283)
T ss_pred             cccCCCChhhEEEc-------CCCCEEEeecccceeccCCCC----cCCCCCcccccCceeeecCcCcCCccchhhHHHH
Confidence            37999999999999       899999999999987643321    2445789999999988655668899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+++|++.+..+.+..+...++.+....+....... .......+...........+..+..+.++|++||+.+
T Consensus       189 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  267 (283)
T cd07830         189 MAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA-SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWD  267 (283)
T ss_pred             HHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh-ccccccccccccccHHHHcccCCHHHHHHHHHhcccC
Confidence            999999999999999999999999988888776554322111 0111111222222233344555789999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|||++|++.||||
T Consensus       268 p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         268 PKKRPTASQALQHPYF  283 (283)
T ss_pred             cccCCCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0608|consensus

Probab=99.92  E-value=3.9e-26  Score=204.23  Aligned_cols=172  Identities=24%  Similarity=0.344  Sum_probs=120.9

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC--------------------------------------
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH--------------------------------------   45 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~--------------------------------------   45 (308)
                      .-.||||||+|||||       .+|+|||+|||||..+.-..                                      
T Consensus       749 GFIHRDiKPDNILID-------rdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~  821 (1034)
T KOG0608|consen  749 GFIHRDIKPDNILID-------RDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMR  821 (1034)
T ss_pred             cceecccCccceEEc-------cCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHh
Confidence            457999999999999       99999999999987542110                                      


Q ss_pred             CC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhh
Q psy7274          46 DH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIIN  124 (308)
Q Consensus        46 ~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~  124 (308)
                      .+ .......|||..|+|||++.. .+|+..+|+||.|||||||+.|++||-.....+.-.+|+++-             
T Consensus       822 ~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~-------------  887 (1034)
T KOG0608|consen  822 QHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWR-------------  887 (1034)
T ss_pred             hhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehh-------------
Confidence            00 011356799999999999874 679999999999999999999999997765444333332211             


Q ss_pred             HHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCC---HHHHhcCCccccccCCCCCCchhhhhhhhhc
Q psy7274         125 EKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIG---VEDALAHPYLEQYYDPADEPVSWRENWGKML  201 (308)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t---~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~  201 (308)
                          ++   +.       --...++|.++.+||.++.+ +++.|++   ++++..||||+.+        +|    ..+.
T Consensus       888 ----~~---l~-------~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgI--------Df----sslR  940 (1034)
T KOG0608|consen  888 ----NF---LH-------IPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGI--------DF----SSLR  940 (1034)
T ss_pred             ----hc---cc-------cccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccccc--------ch----Hhhh
Confidence                00   00       00123678999999998654 6889985   7889999999875        32    2244


Q ss_pred             ccCCCccccccccccccccccc
Q psy7274         202 MFNPHKRIGVEGALAHPYLEQY  223 (308)
Q Consensus       202 ~~~~~~r~~~~~~~~~~~~~~~  223 (308)
                      +....--+.+....|+.+|+.+
T Consensus       941 kq~ApYIP~ItHptDTSNFdpv  962 (1034)
T KOG0608|consen  941 KQRAPYIPRITHPTDTSNFDPV  962 (1034)
T ss_pred             hccCCcCccccCCCccccCCcC
Confidence            4433344455556667777643

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.92  E-value=1.4e-25  Score=193.83  Aligned_cols=165  Identities=38%  Similarity=0.626  Sum_probs=124.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+||+++       .++.+||+|||++.........  ..+...++..|+|||.+.+...++.++||||+||++
T Consensus       122 ~h~dl~p~nil~~-------~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l  192 (287)
T cd07840         122 LHRDIKGSNILIN-------NDGVLKLADFGLARPYTKRNSA--DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCIL  192 (287)
T ss_pred             eeccCcHHHeEEc-------CCCCEEEccccceeeccCCCcc--cccccccccccCCceeeEccccCChHHHHHHHHHHH
Confidence            6999999999999       8999999999999876543211  123446788999999876655689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCC-ChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-DPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+.||.+.+....+..+....+.+....+.............. .......+...+... +..+.+++.+||..+
T Consensus       193 ~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  271 (287)
T cd07840         193 AELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP-KKPYKRRLREFFKHLIDPSALDLLDKLLTLD  271 (287)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc-cccchhHHHHHhcccCCHHHHHHHHHHcCCC
Confidence            999999999999998888888888888887766554322100000000 000001111223333 889999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+||+++++++||||
T Consensus       272 P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         272 PKKRISADQALQHEYF  287 (287)
T ss_pred             hhhCcCHHHHhhCcCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.92  E-value=6.6e-26  Score=199.61  Aligned_cols=136  Identities=24%  Similarity=0.381  Sum_probs=107.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......   ......+||..|+|||++.+ ..++.++||||+||+
T Consensus       117 ivH~Dlkp~NIll~-------~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  185 (321)
T cd05603         117 IIYRDLKPENILLD-------SQGHVVLTDFGLCKEGVEPE---ETTSTFCGTPEYLAPEVLRK-EPYDRTVDWWCLGAV  185 (321)
T ss_pred             eEeccCCHHHeEEC-------CCCCEEEccCCCCccCCCCC---CccccccCCcccCCHHHhcC-CCCCCcCcccccchh
Confidence            36999999999999       89999999999987542221   11345689999999999864 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|..||.+.+.......+...   +                            ..+.+..+..+.++|.+||+.|
T Consensus       186 l~el~~g~~pf~~~~~~~~~~~i~~~---~----------------------------~~~~~~~~~~~~~li~~~l~~~  234 (321)
T cd05603         186 LYEMLYGLPPFYSRDVSQMYDNILHK---P----------------------------LQLPGGKTVAACDLLVGLLHKD  234 (321)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHhcC---C----------------------------CCCCCCCCHHHHHHHHHHccCC
Confidence            99999999999887755544443211   1                            0112345788999999999999


Q ss_pred             CCCCCCH----HHHhcCCcccc
Q psy7274         165 PHKRIGV----EDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~----~eil~hp~f~~  182 (308)
                      |.+|+++    .++++|+||..
T Consensus       235 p~~R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         235 QRRRLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             HhhcCCCCCCHHHHhCCCCcCC
Confidence            9999975    59999999965

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.92  E-value=3.4e-26  Score=205.74  Aligned_cols=142  Identities=27%  Similarity=0.449  Sum_probs=106.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC---------------------------------------
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD---------------------------------------   46 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~---------------------------------------   46 (308)
                      .||||||+|||++       .++.+||+|||+|..+.....                                       
T Consensus       123 vHrDlkp~Nill~-------~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (376)
T cd05598         123 IHRDIKPDNILID-------RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQ  195 (376)
T ss_pred             EeCCCCHHHEEEC-------CCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence            6999999999999       899999999999853311000                                       


Q ss_pred             -CCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhH
Q psy7274          47 -HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINE  125 (308)
Q Consensus        47 -~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~  125 (308)
                       ........+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+.......           
T Consensus       196 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~-----------  263 (376)
T cd05598         196 HQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTL-----------  263 (376)
T ss_pred             cccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccc-----------
Confidence             0001124589999999999864 568999999999999999999999998887655544433211000           


Q ss_pred             HHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCC---CHHHHhcCCccccc
Q psy7274         126 KARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRI---GVEDALAHPYLEQY  183 (308)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~---t~~eil~hp~f~~~  183 (308)
                                   ..+   ....+++++.++|.+|+ .+|.+|+   |+.++++||||+.+
T Consensus       264 -------------~~~---~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         264 -------------HIP---SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             -------------cCC---CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence                         000   01246889999999977 5999999   99999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.92  E-value=1.1e-25  Score=198.65  Aligned_cols=137  Identities=23%  Similarity=0.384  Sum_probs=103.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......   .....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       118 vHrDlkp~Nili~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil  186 (327)
T cd05617         118 IYRDLKLDNVLLD-------ADGHIKLTDYGMCKEGLGPGD---TTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLM  186 (327)
T ss_pred             eccCCCHHHEEEe-------CCCCEEEeccccceeccCCCC---ceecccCCcccCCHHHHCC-CCCCchheeehhHHHH
Confidence            6999999999999       889999999999975322211   1345689999999999865 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCH------HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          86 AEMISNRPIFPGKHY------LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        86 ~ell~g~~pf~~~~~------~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |+|++|+.||.+...      .+.+..+.  ...                     +       ..+...++..+.++|.+
T Consensus       187 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~--~~~---------------------~-------~~~p~~~~~~~~~li~~  236 (327)
T cd05617         187 FEMMAGRSPFDIITDNPDMNTEDYLFQVI--LEK---------------------P-------IRIPRFLSVKASHVLKG  236 (327)
T ss_pred             HHHHhCCCCCCccCCCcccccHHHHHHHH--HhC---------------------C-------CCCCCCCCHHHHHHHHH
Confidence            999999999964321      11111110  000                     0       00122467899999999


Q ss_pred             hcccCCCCCCC------HHHHhcCCccccc
Q psy7274         160 MLTFNPHKRIG------VEDALAHPYLEQY  183 (308)
Q Consensus       160 ~L~~dP~~R~t------~~eil~hp~f~~~  183 (308)
                      ||..||.+|++      +++++.||||..+
T Consensus       237 ~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         237 FLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             HhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            99999999998      4699999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.92  E-value=3.8e-25  Score=191.26  Aligned_cols=159  Identities=41%  Similarity=0.735  Sum_probs=121.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+||+++       .++.+||+|||++........    .....++..|+|||++.+ ..++.++|+||+||++
T Consensus       129 ~h~~l~~~nili~-------~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l  196 (287)
T cd07838         129 VHRDLKPQNILVT-------SDGQVKIADFGLARIYSFEMA----LTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIF  196 (287)
T ss_pred             eeccCChhhEEEc-------cCCCEEEeccCcceeccCCcc----cccccccccccChHHhcc-CCCCCcchhhhHHHHH
Confidence            7999999999999       889999999999987643321    234467889999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+++|.+.+..+.+..+....+.+....+........    ...+......+....+..+..+.++|.+||+.||
T Consensus       197 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  272 (287)
T cd07838         197 AELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR----SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNP  272 (287)
T ss_pred             HHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch----hhcccccccchhhhhhhhhHHHHHHHHHHhccCC
Confidence            999999999999998888888887766654433321110000    0111222223344445667899999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+||+++++++||||
T Consensus       273 ~~Rp~~~~il~~~~~  287 (287)
T cd07838         273 HKRISAFEALQHPYF  287 (287)
T ss_pred             ccCCCHHHHhcCcCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.92  E-value=2.9e-25  Score=207.83  Aligned_cols=159  Identities=21%  Similarity=0.241  Sum_probs=103.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC---------------
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK---------------   70 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---------------   70 (308)
                      .||||||+|||++.      .++.+||+|||+|+........  ....+++|+.|+|||.+....               
T Consensus       277 iHRDLKP~NILl~~------~~~~~KL~DFGlA~~l~~~~~~--~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~s  348 (566)
T PLN03225        277 VHRDVKPQNIIFSE------GSGSFKIIDLGAAADLRVGINY--IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALS  348 (566)
T ss_pred             EeCcCCHHHEEEeC------CCCcEEEEeCCCcccccccccc--CCcccccCCCccChHHhhccCCCCCCcccccccccc
Confidence            69999999999981      3578999999999865433221  135678999999999764321               


Q ss_pred             ------CCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccc
Q psy7274          71 ------GYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI  144 (308)
Q Consensus        71 ------~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (308)
                            .++.++||||+||++|||+++.  +.+.+...++..+....+.... .|.....        ............
T Consensus       349 p~l~~~~~~~k~DVwSlGviL~el~~~~--~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~  417 (566)
T PLN03225        349 PVLWQLNLPDRFDIYSAGLIFLQMAFPN--LRSDSNLIQFNRQLKRNDYDLV-AWRKLVE--------PRASPDLRRGFE  417 (566)
T ss_pred             chhccccCCCCcccHHHHHHHHHHHhCc--CCCchHHHHHHHHHHhcCCcHH-HHHHhhc--------cccchhhhhhhh
Confidence                  2345679999999999999865  4445555555555443333211 1111110        000000000001


Q ss_pred             cCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         145 LYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       145 ~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .....+..+.+||.+||++||.+|||+.++|+||||+..
T Consensus       418 ~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~  456 (566)
T PLN03225        418 VLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDRE  456 (566)
T ss_pred             hccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence            112234567799999999999999999999999999764

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.9e-25  Score=194.86  Aligned_cols=142  Identities=21%  Similarity=0.329  Sum_probs=107.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||++..........  ....+||..|+|||++.+    ...++.++||||+
T Consensus       124 vH~dlkp~Nill~-------~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diwsl  194 (331)
T cd05597         124 VHRDIKPDNVLLD-------KNGHIRLADFGSCLRLLADGTVQ--SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSL  194 (331)
T ss_pred             EECCCCHHHEEEC-------CCCCEEEEECCceeecCCCCCcc--ccceeccccccCHHHHhhccccccCCCCcceeehh
Confidence            6999999999998       88999999999997654332111  123479999999999863    2347889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|+|++|+.||.+.+..+.+..+......                          ..+....+.++..+.+||++||
T Consensus       195 G~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~ll  248 (331)
T cd05597         195 GVCMYEMLYGETPFYAESLVETYGKIMNHKEH--------------------------FQFPPDVTDVSEEAKDLIRRLI  248 (331)
T ss_pred             hhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc--------------------------ccCCCccCCCCHHHHHHHHHHc
Confidence            99999999999999888766665554321110                          0011112346889999999999


Q ss_pred             ccCCCC--CCCHHHHhcCCcccc
Q psy7274         162 TFNPHK--RIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~--R~t~~eil~hp~f~~  182 (308)
                      ..++.+  |++++++++||||..
T Consensus       249 ~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         249 CSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             cCcccccCCCCHHHHhcCCCCCC
Confidence            765544  789999999999976

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.92  E-value=5.3e-26  Score=199.96  Aligned_cols=137  Identities=27%  Similarity=0.416  Sum_probs=109.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+ ..++.++||||+||+
T Consensus       119 i~H~dlkp~Nil~~-------~~~~~kL~Dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~i  187 (318)
T cd05582         119 IIYRDLKPENILLD-------EEGHIKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVL  187 (318)
T ss_pred             EecCCCCHHHeEEC-------CCCcEEEeeccCCcccCCCCC---ceecccCChhhcCHHHHcC-CCCCCccceeccceE
Confidence            36999999999999       889999999999986543211   1345689999999999864 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+..+.+..+.....                               .+...+++.+.+||.+||+.|
T Consensus       188 l~el~tg~~p~~~~~~~~~~~~i~~~~~-------------------------------~~p~~~~~~~~~li~~~l~~~  236 (318)
T cd05582         188 MFEMLTGSLPFQGKDRKETMTMILKAKL-------------------------------GMPQFLSPEAQSLLRALFKRN  236 (318)
T ss_pred             eeeeccCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCCCCCCHHHHHHHHHHhhcC
Confidence            9999999999998876665555432110                               011245789999999999999


Q ss_pred             CCCCCC-----HHHHhcCCccccc
Q psy7274         165 PHKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t-----~~eil~hp~f~~~  183 (308)
                      |.+|+|     +++++.||||...
T Consensus       237 P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         237 PANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HhHcCCCCCCCHHHHhCCCCcCCC
Confidence            999999     6789999999763

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.92  E-value=6.5e-25  Score=186.85  Aligned_cols=134  Identities=25%  Similarity=0.463  Sum_probs=106.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||++........   ......|+..|+|||++.+ ..++.++|+||+||++
T Consensus       124 ~H~di~p~nil~~-------~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il  192 (257)
T cd08223         124 LHRDLKTQNVFLT-------RTNIIKVGDLGIARVLENQCD---MASTLIGTPYYMSPELFSN-KPYNYKSDVWALGCCV  192 (257)
T ss_pred             eccCCCchhEEEe-------cCCcEEEecccceEEecccCC---ccccccCCcCccChhHhcC-CCCCchhhhHHHHHHH
Confidence            6999999999998       889999999999987643221   1344578899999999865 5588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+.......+......                              ......++++.+++.+||..||
T Consensus       193 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~p  242 (257)
T cd08223         193 YEMATLKHAFNAKDMNSLVYRIIEGKLP------------------------------PMPKDYSPELGELIATMLSKRP  242 (257)
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhcCCC------------------------------CCccccCHHHHHHHHHHhccCc
Confidence            9999999999877655444333221100                              0112457899999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+.++++||||
T Consensus       243 ~~Rp~~~~~l~~~~~  257 (257)
T cd08223         243 EKRPSVKSILRQPYI  257 (257)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.92  E-value=2.9e-25  Score=191.45  Aligned_cols=139  Identities=23%  Similarity=0.364  Sum_probs=104.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........    .....||..|+|||++.+. .++.++|+||+||++
T Consensus       117 vH~dikp~Nili~-------~~~~~~l~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l  184 (277)
T cd05607         117 VYRDMKPENVLLD-------DQGNCRLSDLGLAVELKDGKT----ITQRAGTNGYMAPEILKEE-PYSYPVDWFAMGCSI  184 (277)
T ss_pred             EEccCChHhEEEc-------CCCCEEEeeceeeeecCCCce----eeccCCCCCccCHHHHccC-CCCCchhHHHHHHHH
Confidence            6999999999999       889999999999987643221    2335789999999998654 499999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++|+.||.+.........+.. ...                       .  ..  .......+.++.+||.+||+.|
T Consensus       185 ~el~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------~--~~--~~~~~~~~~~~~~li~~~L~~~  237 (277)
T cd05607         185 YEMVAGRTPFKDHKEKVAKEELKRRTLE-----------------------D--EV--KFEHQNFTEESKDICRLFLAKK  237 (277)
T ss_pred             HHHHhCCCCCCCCcchhhHHHHHHHhhc-----------------------c--cc--ccccccCCHHHHHHHHHHhccC
Confidence            999999999976432111111110 000                       0  00  0011246789999999999999


Q ss_pred             CCCCCCH----HHHhcCCccccc
Q psy7274         165 PHKRIGV----EDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~----~eil~hp~f~~~  183 (308)
                      |.+|+++    ++++.|+||+.+
T Consensus       238 P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         238 PEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             HhhCCCCccchhhhhcChhhcCC
Confidence            9999999    778899999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG4645|consensus

Probab=99.92  E-value=2.4e-26  Score=219.50  Aligned_cols=140  Identities=26%  Similarity=0.410  Sum_probs=110.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC-CCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH-DHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~-~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG   82 (308)
                      +||||||+||+++       .+|.+|++|||.|..+..+. ...+.+.++.||+.|||||++.+.  .+...+.||||+|
T Consensus      1356 VHRDIK~aNI~Ld-------~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1356 VHRDIKPANILLD-------FNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred             eecCCCccceeee-------cCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence            6999999999999       99999999999999886653 223346778999999999999754  3567899999999


Q ss_pred             HHHHHHhhCCCCCCCCCHH-HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          83 CILAEMISNRPIFPGKHYL-DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |+..||+||+.||..-+.. ..+.++. . |                       +.+..|     ..+|++.++||.+||
T Consensus      1429 CVVlEM~tGkrPW~~~dne~aIMy~V~-~-g-----------------------h~Pq~P-----~~ls~~g~dFle~Cl 1478 (1509)
T KOG4645|consen 1429 CVVLEMATGKRPWAELDNEWAIMYHVA-A-G-----------------------HKPQIP-----ERLSSEGRDFLEHCL 1478 (1509)
T ss_pred             ceEEEeecCCCchhhccchhHHHhHHh-c-c-----------------------CCCCCc-----hhhhHhHHHHHHHHH
Confidence            9999999999999654322 2222221 1 1                       111211     136899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      +.||++|+++.|+|+|.|-+.
T Consensus      1479 ~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1479 EQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             hcCchhhhHHHHHHHhhcccc
Confidence            999999999999999998865

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=7.7e-25  Score=190.92  Aligned_cols=165  Identities=35%  Similarity=0.587  Sum_probs=123.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.........  ......++..|+|||.+.+...++.++||||+||++
T Consensus       138 ~H~dl~p~nili~-------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~  208 (302)
T cd07864         138 LHRDIKCSNILLN-------NKGQIKLADFGLARLYNSEESR--PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL  208 (302)
T ss_pred             ecCCCCHHHEEEC-------CCCcEEeCcccccccccCCccc--ccccceeccCccChHHhcCCCCCCchhHHHHHHHHH
Confidence            6999999999999       8899999999999876443211  122335678899999886555578999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+++|...+..+.+..+....+.+.+..+..+........... .......+...+..++..+.+++.+||..||
T Consensus       209 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  287 (302)
T cd07864         209 GELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP-KKQYRRRLREEFSFIPTPALDLLDHMLTLDP  287 (302)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccc-ccccccchhhhcCCCCHHHHHHHHHHccCCh
Confidence            999999999999888888888888888887765543321110000000 0000011122334568899999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+++++.||||
T Consensus       288 ~~Rp~~~~il~~~~~  302 (302)
T cd07864         288 SKRCTAEEALNSPWL  302 (302)
T ss_pred             hhCCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.9e-25  Score=192.25  Aligned_cols=138  Identities=27%  Similarity=0.385  Sum_probs=107.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++.......    ....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       124 vH~dlkp~Nil~~-------~~~~~~l~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l  191 (285)
T cd05605         124 VYRDLKPENILLD-------DYGHIRISDLGLAVEIPEGET----IRGRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLI  191 (285)
T ss_pred             EecCCCHHHEEEC-------CCCCEEEeeCCCceecCCCCc----cccccCCCCccCcHHhcC-CCCCccccchhHHHHH
Confidence            6999999999998       889999999999987543221    234588999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+.......+........                           ......++..+.+|+.+||..||
T Consensus       192 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~~~l~~~P  244 (285)
T cd05605         192 YEMIEGKSPFRQRKEKVKREEVERRVKEDQ---------------------------EEYSEKFSEAARSICRQLLTKDP  244 (285)
T ss_pred             HHHHHCCCCCCCCchhhHHHHHHHHhhhcc---------------------------cccCcccCHHHHHHHHHHccCCH
Confidence            999999999988665433333222111000                           01122467889999999999999


Q ss_pred             CCCC-----CHHHHhcCCcccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~  182 (308)
                      ++|+     +++++++||||..
T Consensus       245 ~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         245 GFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHhcCCCCCCHHHHhcCcCccC
Confidence            9999     8999999999965

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.92  E-value=4.5e-25  Score=190.48  Aligned_cols=137  Identities=21%  Similarity=0.333  Sum_probs=105.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||++.......     .....||..|+|||.+.++..++.++|+||+||+
T Consensus       118 ivH~dikp~Nil~~-------~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  185 (279)
T cd05633         118 VVYRDLKPANILLD-------EHGHVRISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCM  185 (279)
T ss_pred             cCCCCCCHHHEEEC-------CCCCEEEccCCcceeccccC-----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHH
Confidence            36999999999998       88999999999997654321     1234789999999998655668999999999999


Q ss_pred             HHHHhhCCCCCCCCCHH--HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYL--DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~--~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++|++|..||.+....  ..+......                       ..       ..+.+..+.++.++|.+||.
T Consensus       186 l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----------------------~~-------~~~~~~~~~~~~~li~~~l~  235 (279)
T cd05633         186 LFKLLRGHSPFRQHKTKDKHEIDRMTLT-----------------------VN-------VELPDSFSPELKSLLEGLLQ  235 (279)
T ss_pred             HHHHHhCCCCcCCCCCcCHHHHHHHhhc-----------------------CC-------cCCccccCHHHHHHHHHHhc
Confidence            99999999999754321  111111000                       00       01123467899999999999


Q ss_pred             cCCCCCC-----CHHHHhcCCccccc
Q psy7274         163 FNPHKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~-----t~~eil~hp~f~~~  183 (308)
                      .||++|+     |++++++||||+.+
T Consensus       236 ~~p~~R~~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         236 RDVSKRLGCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             CCHHHhcCCCCCCHHHHHhCccccCC
Confidence            9999999     59999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0192|consensus

Probab=99.92  E-value=7.2e-25  Score=192.94  Aligned_cols=131  Identities=20%  Similarity=0.291  Sum_probs=104.2

Q ss_pred             CCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC-CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .++ ++||||||+++......   ..++...||..|||||++.+ ...|+.++||||+|+
T Consensus       165 IHrDLK~~NiLv~-------~~~~~~KI~DFGlsr~~~~~~---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgI  234 (362)
T KOG0192|consen  165 IHRDLKSDNILVD-------LKGKTLKIADFGLSREKVISK---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGI  234 (362)
T ss_pred             eecccChhhEEEc-------CCCCEEEECCCccceeecccc---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHH
Confidence            6999999999999       786 99999999998765432   12455799999999999974 356999999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|||++|+.||.+.........++.....|.                        .     .....+.+..|+.+||..
T Consensus       235 vlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~------------------------~-----p~~~~~~l~~l~~~CW~~  285 (362)
T KOG0192|consen  235 VLWELLTGEIPFEDLAPVQVASAVVVGGLRPP------------------------I-----PKECPPHLSSLMERCWLV  285 (362)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC------------------------C-----CccCCHHHHHHHHHhCCC
Confidence            99999999999999887444444432211111                        0     112568899999999999


Q ss_pred             CCCCCCCHHHHh
Q psy7274         164 NPHKRIGVEDAL  175 (308)
Q Consensus       164 dP~~R~t~~eil  175 (308)
                      ||.+||+..+++
T Consensus       286 dp~~RP~f~ei~  297 (362)
T KOG0192|consen  286 DPSRRPSFLEIV  297 (362)
T ss_pred             CCCcCCCHHHHH
Confidence            999999998876

>PHA02988 hypothetical protein; Provisional

Probab=99.92  E-value=7.7e-25  Score=189.42  Aligned_cols=130  Identities=18%  Similarity=0.189  Sum_probs=102.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~   83 (308)
                      -+||||||+|||++       .++.+||+|||+++......      ...+||..|+|||++.+. ..++.++||||+||
T Consensus       144 ~~Hrdlkp~nill~-------~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGv  210 (283)
T PHA02988        144 KPYKNLTSVSFLVT-------ENYKLKIICHGLEKILSSPP------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGV  210 (283)
T ss_pred             CCCCcCChhhEEEC-------CCCcEEEcccchHhhhcccc------ccccCcccccCHHHhhhccccccchhhhhHHHH
Confidence            36999999999999       89999999999998754321      234788999999998542 45899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|||++|+.||.+.+..+....+......+.                             .....+..+.+|+.+||+.
T Consensus       211 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-----------------------------~~~~~~~~l~~li~~cl~~  261 (283)
T PHA02988        211 VLWEIFTGKIPFENLTTKEIYDLIINKNNSLK-----------------------------LPLDCPLEIKCIVEACTSH  261 (283)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-----------------------------CCCcCcHHHHHHHHHHhcC
Confidence            99999999999988776665554432211110                             0124578999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||.+|||+.++++
T Consensus       262 dp~~Rps~~ell~  274 (283)
T PHA02988        262 DSIKRPNIKEILY  274 (283)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999874

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.92  E-value=4e-25  Score=188.28  Aligned_cols=141  Identities=31%  Similarity=0.494  Sum_probs=108.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||.+......   ........+|..|+|||++.....++.++|+||+||++
T Consensus       120 ~H~dikp~NIl~~-------~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  189 (260)
T PF00069_consen  120 VHRDIKPENILLD-------ENGEVKLIDFGSSVKLSEN---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIIL  189 (260)
T ss_dssp             EESSBSGGGEEES-------TTSEEEESSGTTTEESTST---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHH
T ss_pred             ccccccccccccc-------ccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence            6999999999999       8999999999999864211   12245568899999999986345689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+....+....+...............                        ......+.++|.+||+.||
T Consensus       190 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~l~~li~~~l~~~p  245 (260)
T PF00069_consen  190 YELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQS------------------------REKSEELRDLIKKMLSKDP  245 (260)
T ss_dssp             HHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSH------------------------TTSHHHHHHHHHHHSSSSG
T ss_pred             ccccccccccccccchhhhhhhhhccccccccccccc------------------------chhHHHHHHHHHHHccCCh
Confidence            9999999999887555555555443322211111100                        0112789999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      ++|||+.++++||||
T Consensus       246 ~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  246 EQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGSTTHHHHHTSGGG
T ss_pred             hHCcCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=7e-25  Score=187.27  Aligned_cols=138  Identities=22%  Similarity=0.422  Sum_probs=105.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++................|+..|+|||++.+ ..++.++||||+||++
T Consensus       126 ~H~dl~p~nilv~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  197 (263)
T cd06625         126 VHRDIKGANILRD-------SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTV  197 (263)
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEeecccceeccccccccccccCCCcCccccCcceecc-CCCCchhhhHHHHHHH
Confidence            6999999999999       8899999999999865432211111134578899999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +++++|+.||...+.......+......                             ......++..+.++|.+||..+|
T Consensus       198 ~el~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~li~~~l~~~p  248 (263)
T cd06625         198 VEMLTEKPPWAEFEAMAAIFKIATQPTN-----------------------------PQLPSHVSPDARNFLRRTFVENA  248 (263)
T ss_pred             HHHHhCCCCccccchHHHHHHHhccCCC-----------------------------CCCCccCCHHHHHHHHHHhhcCc
Confidence            9999999999765544333222111000                             01123467899999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+.++++|+||
T Consensus       249 ~~Rpt~~~ll~~~~~  263 (263)
T cd06625         249 KKRPSAEELLRHFFV  263 (263)
T ss_pred             ccCCCHHHHhhCCCC
Confidence            999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.92  E-value=8.3e-25  Score=187.81  Aligned_cols=136  Identities=23%  Similarity=0.367  Sum_probs=103.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .++.+||+|||+++.......   ......|+..|+|||++.+    ...++.++|+||+
T Consensus       133 vh~dl~~~nili~-------~~~~~~l~Dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  202 (272)
T cd06637         133 IHRDIKGQNVLLT-------ENAEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL  202 (272)
T ss_pred             ccCCCCHHHEEEC-------CCCCEEEccCCCceecccccc---cCCcccccccccCHhHhccccCcCCCCCchhhHHHH
Confidence            6999999999999       889999999999986543211   1344678999999999853    2347889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|+.||...........+...                        +. .    .......+.++.+||.+||
T Consensus       203 Gv~l~el~~g~~p~~~~~~~~~~~~~~~~------------------------~~-~----~~~~~~~~~~~~~li~~~l  253 (272)
T cd06637         203 GITAIEMAEGAPPLCDMHPMRALFLIPRN------------------------PA-P----RLKSKKWSKKFQSFIESCL  253 (272)
T ss_pred             HHHHHHHHhCCCCccccCHHHHHHHHhcC------------------------CC-C----CCCCCCcCHHHHHHHHHHc
Confidence            99999999999999655433222211100                        00 0    0011245788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      ..+|.+|||+.++++||||
T Consensus       254 ~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         254 VKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCChhhCCCHHHHhhCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=3.3e-25  Score=192.00  Aligned_cols=143  Identities=22%  Similarity=0.386  Sum_probs=106.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG   82 (308)
                      -.||||||+||+++       .++.+||+|||+++.......    .....||..|+|||++.+.  ..++.++|+||+|
T Consensus       129 i~H~dlkp~Nil~~-------~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG  197 (288)
T cd06616         129 IIHRDVKPSNILLD-------RNGNIKLCDFGISGQLVDSIA----KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLG  197 (288)
T ss_pred             eeccCCCHHHEEEc-------cCCcEEEeecchhHHhccCCc----cccccCccCccCHHHhccccccCCcchhhhhHHH
Confidence            37999999999998       889999999999986543221    1334688899999998654  3689999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|+.||....  .....+........+                      ... ......++.++.+||.+||.
T Consensus       198 ~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~~l~~li~~~l~  252 (288)
T cd06616         198 ITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPP----------------------ILS-NSEEREFSPSFVNFINLCLI  252 (288)
T ss_pred             HHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCC----------------------cCC-CcCCCccCHHHHHHHHHHcc
Confidence            99999999999997654  122222221111100                      000 00112467899999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .+|++|||++++++||||+..
T Consensus       253 ~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         253 KDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             CChhhCcCHHHHhcChhhhch
Confidence            999999999999999999774

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.92  E-value=3e-25  Score=192.16  Aligned_cols=138  Identities=28%  Similarity=0.430  Sum_probs=104.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||++........    ....+||..|+|||++.+ ..++.++|+||+||++
T Consensus       124 iH~dikp~Nil~~-------~~~~~~l~Dfg~~~~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l  191 (285)
T cd05630         124 VYRDLKPENILLD-------DHGHIRISDLGLAVHVPEGQT----IKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLL  191 (285)
T ss_pred             EeCCCCHHHEEEC-------CCCCEEEeeccceeecCCCcc----ccCCCCCccccChHHHcC-CCCCCccccHHHHHHH
Confidence            6999999999999       889999999999976543221    234578999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+................                    ..       .......++++.+|+.+||+.||
T Consensus       192 ~~l~~g~~Pf~~~~~~~~~~~~~~~~~~--------------------~~-------~~~~~~~~~~~~~li~~~l~~~p  244 (285)
T cd05630         192 YEMIAGQSPFQQRKKKIKREEVERLVKE--------------------VQ-------EEYSEKFSPDARSLCKMLLCKDP  244 (285)
T ss_pred             HHHHhCCCCCCCCCccchHHHHHhhhhh--------------------hh-------hhcCccCCHHHHHHHHHHhhcCH
Confidence            9999999999765422111111110000                    00       00123467889999999999999


Q ss_pred             CCCCC-----HHHHhcCCcccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~  182 (308)
                      .+|+|     ++++++||||+.
T Consensus       245 ~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         245 KERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHccCCCCCchHHHHcChhhhc
Confidence            99999     899999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0579|consensus

Probab=99.91  E-value=5.1e-25  Score=197.25  Aligned_cols=142  Identities=23%  Similarity=0.369  Sum_probs=113.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .|||||..|||++       -+|.++|+|||.+.........   ..+++||++|||||++..    ...|++++|||||
T Consensus       152 IHRDLKAGNiL~T-------ldGdirLADFGVSAKn~~t~qk---RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSl  221 (1187)
T KOG0579|consen  152 IHRDLKAGNILLT-------LDGDIRLADFGVSAKNKSTRQK---RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSL  221 (1187)
T ss_pred             hhhhccccceEEE-------ecCcEeeecccccccchhHHhh---hccccCCcccccchheeeccccCCCchhhhhHHhh
Confidence            5999999999999       8999999999998765433222   356899999999999853    4569999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |+++.||..+.+|-..-+....+-+|...   -+|..+.                         ....+..+.|||.+||
T Consensus       222 GITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTLlq-------------------------PS~Ws~~F~DfLk~cL  273 (1187)
T KOG0579|consen  222 GITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTLLQ-------------------------PSHWSRSFSDFLKRCL  273 (1187)
T ss_pred             hhHHHHHhccCCCccccchHHHHHHHhhc---CCCcccC-------------------------cchhhhHHHHHHHHHH
Confidence            99999999999998777766666555431   1111110                         1234688999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccccC
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~~~  185 (308)
                      ..||..||++.++|+||||+....
T Consensus       274 ~Knp~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  274 VKNPRNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             hcCCccCCCHHHHhhCcccccCCc
Confidence            999999999999999999986543

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.91  E-value=8.2e-25  Score=193.44  Aligned_cols=142  Identities=20%  Similarity=0.335  Sum_probs=107.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC----CCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----KGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||+|+.........  ....+||..|+|||++.+.    ..++.++||||+
T Consensus       124 iHrDlkp~Nill~-------~~~~~kl~DfG~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSl  194 (331)
T cd05624         124 VHRDIKPDNVLLD-------MNGHIRLADFGSCLKMNQDGTVQ--SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSL  194 (331)
T ss_pred             eeccCchHHEEEc-------CCCCEEEEeccceeeccCCCcee--eccccCCcccCCHHHHhccccCCCCCCCcccEEee
Confidence            6999999999998       88999999999998764332111  2335799999999998541    347889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|+|++|+.||.+.+..+.+..+.....                          ..++......++.++.++|.+||
T Consensus       195 Gvil~ell~g~~Pf~~~~~~~~~~~i~~~~~--------------------------~~~~p~~~~~~~~~~~~li~~ll  248 (331)
T cd05624         195 GVCMYEMLYGETPFYAESLVETYGKIMNHEE--------------------------RFQFPSHITDVSEEAKDLIQRLI  248 (331)
T ss_pred             ehhhhhhhhCCCCccCCCHHHHHHHHHcCCC--------------------------cccCCCccccCCHHHHHHHHHHc
Confidence            9999999999999988876665555432111                          00111112356899999999999


Q ss_pred             ccCCCC--CCCHHHHhcCCcccc
Q psy7274         162 TFNPHK--RIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~--R~t~~eil~hp~f~~  182 (308)
                      ..++.+  |++++++++|+||+.
T Consensus       249 ~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         249 CSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             cCchhhcCCCCHHHHhcCCCcCC
Confidence            976654  468999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG1006|consensus

Probab=99.91  E-value=8.7e-26  Score=183.04  Aligned_cols=145  Identities=21%  Similarity=0.291  Sum_probs=111.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       ..|.+||||||++..+..+..    .+.-.|-+.|||||.+-.. .+|+-++|+||||++
T Consensus       190 IHRDvKPSNILld-------r~G~vKLCDFGIcGqLv~SiA----kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGIT  258 (361)
T KOG1006|consen  190 IHRDVKPSNILLD-------RHGDVKLCDFGICGQLVDSIA----KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGIT  258 (361)
T ss_pred             hhccCChhheEEe-------cCCCEeeecccchHhHHHHHH----hhhccCCccccChhccCCccCCcchhhhhhhhcce
Confidence            5999999999999       999999999999987654322    2344788999999998643 359999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhh-CCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGIL-GSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|+.||+.|+.+.+.  ++..+..+. |.|+.-..                       ..-.-..+..+..++..||..
T Consensus       259 L~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~-----------------------~~~~~~~s~~~~~fintCl~K  313 (361)
T KOG1006|consen  259 LYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLF-----------------------DKECVHYSFSMVRFINTCLIK  313 (361)
T ss_pred             EeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecC-----------------------cccccccCHHHHHHHHHHhhc
Confidence            9999999999987653  444444332 33322110                       001113678899999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccCC
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      |-..||.-.+++++||++.+...
T Consensus       314 d~~~Rpky~~Lk~~~fyr~y~~~  336 (361)
T KOG1006|consen  314 DRSDRPKYDDLKKFPFYRMYAVE  336 (361)
T ss_pred             ccccCcchhhhhcCchhhhhhhc
Confidence            99999999999999999876443

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.91  E-value=1.2e-24  Score=188.07  Aligned_cols=139  Identities=22%  Similarity=0.299  Sum_probs=107.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh----CCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||++.......   .......||..|+|||++.    ....++.++|+||+
T Consensus       125 ~H~dlkp~nili~-------~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  194 (282)
T cd06643         125 IHRDLKAGNILFT-------LDGDIKLADFGVSAKNTRTI---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL  194 (282)
T ss_pred             eecCCCcccEEEc-------cCCCEEEccccccccccccc---cccccccccccccCHhhccccCCCCCCCCccchhhhH
Confidence            6999999999998       88999999999997653321   1123457899999999874    23447789999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|++||.+.+..+....+.......                            ......++..+.+||.+||
T Consensus       195 Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~l  246 (282)
T cd06643         195 GITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT----------------------------LAQPSRWSSEFKDFLKKCL  246 (282)
T ss_pred             HHHHHHHccCCCCccccCHHHHHHHHhhcCCCC----------------------------CCCccccCHHHHHHHHHHc
Confidence            999999999999998776555444433211100                            0011235688999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ..||.+|||++++++||||..
T Consensus       247 ~~~p~~Rp~~~~il~~~~~~~  267 (282)
T cd06643         247 EKNVDARWTTTQLLQHPFVTV  267 (282)
T ss_pred             cCChhhCcCHHHHhcCCCEec
Confidence            999999999999999999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.91  E-value=1.1e-24  Score=189.37  Aligned_cols=142  Identities=25%  Similarity=0.389  Sum_probs=109.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........   .....+|+..|+|||++.+ ..++.++|+||+||++
T Consensus       140 vH~dlkp~Nill~-------~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil  208 (292)
T cd06658         140 IHRDIKSDSILLT-------SDGRIKLSDFGFCAQVSKEVP---KRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMV  208 (292)
T ss_pred             eecCCCHHHEEEc-------CCCCEEEccCcchhhcccccc---cCceeecCccccCHHHHcc-CCCCchhhHHHHHHHH
Confidence            5999999999998       889999999999976543221   1234578999999998754 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +||++|+.||.+.+....+..+.........                            .....+..+.+++.+||..||
T Consensus       209 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~~l~~~P  260 (292)
T cd06658         209 IEMIDGEPPYFNEPPLQAMRRIRDNLPPRVK----------------------------DSHKVSSVLRGFLDLMLVREP  260 (292)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhcCCCccc----------------------------cccccCHHHHHHHHHHccCCh
Confidence            9999999999877655544433221110000                            011357889999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .+|||++++++||||+....+
T Consensus       261 ~~Rpt~~~il~~~~~~~~~~~  281 (292)
T cd06658         261 SQRATAQELLQHPFLKLAGPP  281 (292)
T ss_pred             hHCcCHHHHhhChhhhccCCc
Confidence            999999999999999875444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=1.4e-24  Score=187.88  Aligned_cols=143  Identities=24%  Similarity=0.430  Sum_probs=108.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC-----CCCchhhHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK-----GYTKSIDIW   79 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiW   79 (308)
                      -.||||||+||+++       .++.+||+|||++.......     ....+|+..|+|||++.+..     .++.++|+|
T Consensus       124 i~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diw  191 (286)
T cd06622         124 IIHRDVKPTNVLVN-------GNGQVKLCDFGVSGNLVASL-----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVW  191 (286)
T ss_pred             EeeCCCCHHHEEEC-------CCCCEEEeecCCcccccCCc-----cccCCCccCccCcchhcCCCCCccCCCCcccchH
Confidence            36999999999999       88999999999998654321     23347888999999875322     357899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          80 SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |+||++++|++|+.||...........+........+                           .+.+.++.++.+||.+
T Consensus       192 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~  244 (286)
T cd06622         192 SLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP---------------------------TLPSGYSDDAQDFVAK  244 (286)
T ss_pred             hHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC---------------------------CCCcccCHHHHHHHHH
Confidence            9999999999999999765544333333222111110                           1123467899999999


Q ss_pred             hcccCCCCCCCHHHHhcCCccccccCC
Q psy7274         160 MLTFNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      ||..+|++||++++++.||||......
T Consensus       245 ~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         245 CLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             HcccCcccCCCHHHHhcChhhhhccCC
Confidence            999999999999999999999776544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=1.4e-24  Score=187.92  Aligned_cols=139  Identities=26%  Similarity=0.409  Sum_probs=108.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........    .....|+..|+|||++.+ ..++.++|+||+||++
T Consensus       124 iH~dikp~Nili~-------~~~~~kl~Dfg~~~~~~~~~~----~~~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l  191 (285)
T cd05632         124 VYRDLKPENILLD-------DYGHIRISDLGLAVKIPEGES----IRGRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLI  191 (285)
T ss_pred             eecCCCHHHEEEC-------CCCCEEEecCCcceecCCCCc----ccCCCCCcCccChHHhcC-CCCCcccchHHHHHHH
Confidence            6999999999998       889999999999976543211    234578999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+.........+........                           ....+..+.++.+|+.+||+.||
T Consensus       192 ~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~~~l~~~P  244 (285)
T cd05632         192 YEMIEGQSPFRGRKEKVKREEVDRRVLETE---------------------------EVYSAKFSEEAKSICKMLLTKDP  244 (285)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhhhccc---------------------------cccCccCCHHHHHHHHHHccCCH
Confidence            999999999987765444333322111100                           01123467889999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~  183 (308)
                      ++|+|     +.+++.|+||+..
T Consensus       245 ~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         245 KQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             hHcCCCcccChHHHHcChhhhcC
Confidence            99999     8899999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0611|consensus

Probab=99.91  E-value=5.4e-25  Score=187.98  Aligned_cols=135  Identities=24%  Similarity=0.395  Sum_probs=114.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||.+|||+|       .+|.+||+|||++..+..    ..++.++||++.|.+||++-|...-++.+|.||+|+++
T Consensus       175 vHRDLKLENILLD-------~N~NiKIADFGLSNly~~----~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLL  243 (668)
T KOG0611|consen  175 VHRDLKLENILLD-------QNNNIKIADFGLSNLYAD----KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLL  243 (668)
T ss_pred             eecccchhheeec-------CCCCeeeeccchhhhhcc----ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHH
Confidence            6999999999999       999999999999988754    33578899999999999986544447889999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |.|+.|..||.|.+....+..|.+....                                -|.-+.++..||+.||..||
T Consensus       244 YtLVyGtMPFDG~Dhk~lvrQIs~GaYr--------------------------------EP~~PSdA~gLIRwmLmVNP  291 (668)
T KOG0611|consen  244 YTLVYGTMPFDGRDHKRLVRQISRGAYR--------------------------------EPETPSDASGLIRWMLMVNP  291 (668)
T ss_pred             HHHhhcccccCCchHHHHHHHhhccccc--------------------------------CCCCCchHHHHHHHHHhcCc
Confidence            9999999999999988877777543211                                12234678999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ++|.|+++|-.|=|.+..
T Consensus       292 ~RRATieDiAsHWWvNwg  309 (668)
T KOG0611|consen  292 ERRATIEDIASHWWVNWG  309 (668)
T ss_pred             ccchhHHHHhhhheeecc
Confidence            999999999999888643

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.91  E-value=2.4e-24  Score=184.55  Aligned_cols=138  Identities=23%  Similarity=0.460  Sum_probs=102.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++................++..|+|||.+.+ ..++.++|+||+||++
T Consensus       128 ~H~~l~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~  199 (266)
T cd06651         128 VHRDIKGANILRD-------SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTV  199 (266)
T ss_pred             eeCCCCHHHEEEC-------CCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHH
Confidence            6999999999998       8899999999999865432111111233568889999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +++++|+.||...........+..   .+.                     .+     .+...+++.+.+++ +||..+|
T Consensus       200 ~el~~g~~pf~~~~~~~~~~~~~~---~~~---------------------~~-----~~~~~~~~~~~~li-~~~~~~p  249 (266)
T cd06651         200 VEMLTEKPPWAEYEAMAAIFKIAT---QPT---------------------NP-----QLPSHISEHARDFL-GCIFVEA  249 (266)
T ss_pred             HHHHHCCCCccccchHHHHHHHhc---CCC---------------------CC-----CCchhcCHHHHHHH-HHhcCCh
Confidence            999999999976544333322211   000                     00     01123567888888 6777899


Q ss_pred             CCCCCHHHHhcCCccc
Q psy7274         166 HKRIGVEDALAHPYLE  181 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~  181 (308)
                      ++|||++++++||||+
T Consensus       250 ~~Rp~~~eil~hp~~~  265 (266)
T cd06651         250 RHRPSAEELLRHPFAQ  265 (266)
T ss_pred             hhCcCHHHHhcCcccc
Confidence            9999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.91  E-value=2.3e-24  Score=186.22  Aligned_cols=136  Identities=24%  Similarity=0.362  Sum_probs=103.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .++.++|+|||++........   .....+|+..|+|||++..    ...++.++|+||+
T Consensus       143 vH~dl~~~nili~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dvwsl  212 (282)
T cd06636         143 IHRDIKGQNVLLT-------ENAEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSL  212 (282)
T ss_pred             ccCCCCHHHEEEC-------CCCCEEEeeCcchhhhhcccc---CCCcccccccccCHhhcCcccCcCcCCCcccchhHH
Confidence            6999999999999       889999999999886543211   1234578999999998752    2347889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|..||........+..+...   ..                          ........+.++.+||.+||
T Consensus       213 G~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~--------------------------~~~~~~~~~~~~~~li~~cl  263 (282)
T cd06636         213 GITAIEMAEGAPPLCDMHPMRALFLIPRN---PP--------------------------PKLKSKKWSKKFIDFIEGCL  263 (282)
T ss_pred             HHHHHHHHhCCCCccccCHHhhhhhHhhC---CC--------------------------CCCcccccCHHHHHHHHHHh
Confidence            99999999999999765433322221110   00                          00011246789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      ..||.+|||+.++++||||
T Consensus       264 ~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         264 VKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             CCChhhCcCHHHHhcCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.91  E-value=2.4e-24  Score=185.81  Aligned_cols=139  Identities=22%  Similarity=0.326  Sum_probs=105.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++......     ....+|+..|+|||++.++..++.++|+||+||+
T Consensus       118 i~H~di~p~nili~-------~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~  185 (278)
T cd05606         118 VVYRDLKPANILLD-------EHGHVRISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM  185 (278)
T ss_pred             EEcCCCCHHHEEEC-------CCCCEEEccCcCccccCccC-----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHH
Confidence            36999999999999       88999999999998654321     1334789999999998755568999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+................                         .   ..+....+..+.+++.+||..+
T Consensus       186 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~---~~~~~~~s~~~~~li~~~l~~~  237 (278)
T cd05606         186 LFKLLRGHSPFRQHKTKDKHEIDRMTLTM-------------------------A---VELPDSFSPELRSLLEGLLQRD  237 (278)
T ss_pred             HHHHHhCCCCCCCCCccchHHHHHHhhcc-------------------------C---CCCCCcCCHHHHHHHHHHhhcC
Confidence            99999999999765321111100000000                         0   0111235789999999999999


Q ss_pred             CCCCC-----CHHHHhcCCccccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~~  183 (308)
                      |.+|+     ++.++++||||+..
T Consensus       238 p~~R~~~~~~~~~~ll~~~~~~~~  261 (278)
T cd05606         238 VNRRLGCLGRGAQEVKEHPFFRSL  261 (278)
T ss_pred             HHhccCCCCCCHHHHHhCccccCC
Confidence            99999     99999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.91  E-value=2.7e-24  Score=186.75  Aligned_cols=140  Identities=22%  Similarity=0.316  Sum_probs=105.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .++.+||+|||++........   ......++..|+|||++.+    ...++.++|+||+
T Consensus       132 ~H~dlkp~Nili~-------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  201 (292)
T cd06644         132 IHRDLKAGNVLLT-------LDGDIKLADFGVSAKNVKTLQ---RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL  201 (292)
T ss_pred             eecCCCcceEEEc-------CCCCEEEccCccceecccccc---ccceecCCccccCceeeccccccCCCCCchhhhHhH
Confidence            6999999999998       889999999999876432211   1234568889999998752    2346889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|+|++|..||.+.+.......+...   ..+                         ........+.++.++|.+||
T Consensus       202 G~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~-------------------------~~~~~~~~~~~~~~li~~~l  253 (292)
T cd06644         202 GITLIEMAQIEPPHHELNPMRVLLKIAKS---EPP-------------------------TLSQPSKWSMEFRDFLKTAL  253 (292)
T ss_pred             HHHHHHHhcCCCCCccccHHHHHHHHhcC---CCc-------------------------cCCCCcccCHHHHHHHHHHh
Confidence            99999999999999776544333222211   000                         00011245688999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ..+|++||+++++++||||...
T Consensus       254 ~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         254 DKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             cCCcccCcCHHHHhcCcccccc
Confidence            9999999999999999999764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.91  E-value=5e-24  Score=185.62  Aligned_cols=141  Identities=25%  Similarity=0.420  Sum_probs=109.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.........   ....+|+..|+|||++.+ ..++.++|+||+||++
T Consensus       139 vH~dl~p~Nill~-------~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il  207 (297)
T cd06659         139 IHRDIKSDSILLT-------LDGRVKLSDFGFCAQISKDVPK---RKSLVGTPYWMAPEVISR-TPYGTEVDIWSLGIMV  207 (297)
T ss_pred             ecCCCCHHHeEEc-------cCCcEEEeechhHhhccccccc---ccceecCccccCHHHHcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       8999999999999765432211   234678999999999864 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +||++|+.||.+.+..+.+..+...   +..                         ........+..+.++|.+||+.+|
T Consensus       208 ~el~~g~~p~~~~~~~~~~~~~~~~---~~~-------------------------~~~~~~~~~~~l~~~i~~~l~~~P  259 (297)
T cd06659         208 IEMVDGEPPYFSDSPVQAMKRLRDS---PPP-------------------------KLKNAHKISPVLRDFLERMLTREP  259 (297)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHhcc---CCC-------------------------CccccCCCCHHHHHHHHHHhcCCc
Confidence            9999999999877655554433211   000                         001123467889999999999999


Q ss_pred             CCCCCHHHHhcCCccccccC
Q psy7274         166 HKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~  185 (308)
                      .+||+++++++||||.....
T Consensus       260 ~~Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         260 QERATAQELLDHPFLLQTGL  279 (297)
T ss_pred             ccCcCHHHHhhChhhccCCC
Confidence            99999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.91  E-value=2.7e-24  Score=187.22  Aligned_cols=140  Identities=27%  Similarity=0.454  Sum_probs=108.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++.........   .....|+..|+|||.+.+ ..++.++|+||+||+
T Consensus       136 i~H~dL~p~Nili~-------~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvi  204 (296)
T cd06655         136 VIHRDIKSDNVLLG-------MDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIM  204 (296)
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEccCccchhccccccc---CCCcCCCccccCcchhcC-CCCCchhhHHHHHHH
Confidence            36999999999999       8899999999998865433211   233578899999998764 558899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+.......+... +.+..                           .....+++.+.++|.+||..|
T Consensus       205 l~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~---------------------------~~~~~~~~~~~~li~~~l~~d  256 (296)
T cd06655         205 AIEMVEGEPPYLNENPLRALYLIATN-GTPEL---------------------------QNPEKLSPIFRDFLNRCLEMD  256 (296)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhc-CCccc---------------------------CCcccCCHHHHHHHHHHhhcC
Confidence            99999999999887765544333211 11100                           011245788999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||+.+++.||||+..
T Consensus       257 p~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         257 VEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             hhhCCCHHHHhhChHhhhc
Confidence            9999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.91  E-value=3.5e-24  Score=189.93  Aligned_cols=133  Identities=25%  Similarity=0.356  Sum_probs=98.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......... .....+|..|+|||++.+ ..++.++||||+||++
T Consensus       196 vHrDiKp~Nil~~-------~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il  266 (338)
T cd05102         196 IHRDLAARNILLS-------ENNVVKICDFGLARDIYKDPDYVR-KGSARLPLKWMAPESIFD-KVYTTQSDVWSFGVLL  266 (338)
T ss_pred             ECCCCccceEEEc-------CCCcEEEeecccccccccCcchhc-ccCCCCCccccCcHHhhc-CCCCcccCHHHHHHHH
Confidence            6999999999999       889999999999986543221111 123356678999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |..||.+....+.+...... +..                       .     ......++.+.+++.+||..|
T Consensus       267 ~el~~~g~~pf~~~~~~~~~~~~~~~-~~~-----------------------~-----~~~~~~~~~l~~li~~cl~~d  317 (338)
T cd05102         267 WEIFSLGASPYPGVQINEEFCQRLKD-GTR-----------------------M-----RAPENATPEIYRIMLACWQGD  317 (338)
T ss_pred             HHHHhCCCCCCCCCCccHHHHHHHhc-CCC-----------------------C-----CCCCCCCHHHHHHHHHHccCC
Confidence            99997 99999876543322221110 000                       0     011245788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       318 p~~RPs~~el~~  329 (338)
T cd05102         318 PKERPTFSALVE  329 (338)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.91  E-value=5.2e-24  Score=181.08  Aligned_cols=135  Identities=21%  Similarity=0.312  Sum_probs=106.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++........   .....|+..|+|||++.+ ..++.++|+||+||+
T Consensus       122 i~h~dl~~~nili~-------~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  190 (256)
T cd08529         122 ILHRDIKSLNLFLD-------AYDNVKIGDLGVAKLLSDNTNF---ANTIVGTPYYLSPELCED-KPYNEKSDVWALGVV  190 (256)
T ss_pred             cccCCCCcceEEEe-------CCCCEEEcccccceeccCccch---hhccccCccccCHHHhcC-CCCCCccchHHHHHH
Confidence            37999999999999       8899999999999876543211   234578899999999865 458899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+.......+......+                              .....+..+.+++.+||+.+
T Consensus       191 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08529         191 LYECCTGKHPFDANNQGALILKIIRGVFPP------------------------------VSQMYSQQLAQLIDQCLTKD  240 (256)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CccccCHHHHHHHHHHccCC
Confidence            999999999998877554444433211100                              01135688999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |++||++.++++|||+
T Consensus       241 p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         241 YRQRPDTFQLLRNPSL  256 (256)
T ss_pred             cccCcCHHHHhhCCCC
Confidence            9999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0607|consensus

Probab=99.91  E-value=3.7e-24  Score=177.79  Aligned_cols=148  Identities=26%  Similarity=0.374  Sum_probs=109.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC----CCCCccCcccccccchhhHhh----CCCCCCchhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD----HTGFLTEYVATRWYRAPEIML----NSKGYTKSID   77 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~----~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~D   77 (308)
                      .||||||+|||-.    .-|+-+-+|||||.++....-...    ....+.+.||+..|||||++-    ....|+.++|
T Consensus       198 AHRDlKPENiLC~----~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCD  273 (463)
T KOG0607|consen  198 AHRDLKPENILCE----SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCD  273 (463)
T ss_pred             ccccCCccceeec----CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhcccccccccccc
Confidence            6999999999965    122445689999998875432211    122356789999999999873    2345899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCH---------------HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCc
Q psy7274          78 IWSVGCILAEMISNRPIFPGKHY---------------LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW  142 (308)
Q Consensus        78 iWSlG~il~ell~g~~pf~~~~~---------------~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (308)
                      .||||+|+|-|++|.+||.|.-.               ...+..|-+.....+..+|.                      
T Consensus       274 lwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWa----------------------  331 (463)
T KOG0607|consen  274 LWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA----------------------  331 (463)
T ss_pred             HHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhH----------------------
Confidence            99999999999999999976421               12222233333333333333                      


Q ss_pred             cccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCcccccc
Q psy7274         143 EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       143 ~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~  184 (308)
                           .+|.++++|++.+|..|+.+|.++.++++|||++...
T Consensus       332 -----hIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  332 -----HISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             -----HhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence                 4689999999999999999999999999999997653

>KOG0574|consensus

Probab=99.90  E-value=1.2e-25  Score=185.25  Aligned_cols=140  Identities=23%  Similarity=0.348  Sum_probs=111.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||..|||++       .+|..||+|||.|..+......   ..+.+||+.|||||++. ..+|+.++||||+|++.
T Consensus       151 IHRDIKAGNILLN-------T~G~AKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVI~-EIGY~~~ADIWSLGITa  219 (502)
T KOG0574|consen  151 IHRDIKAGNILLN-------TDGIAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIE-EIGYDTKADIWSLGITA  219 (502)
T ss_pred             HHhhcccccEEEc-------ccchhhhhhccccchhhhhHHh---hCccccCcccccHHHHH-HhccchhhhHhhhcchh
Confidence            6999999999998       9999999999999887543322   35679999999999986 46799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      .||..|++||.......   .|+-+...|+|..-.                         ....|.++-||+++||..+|
T Consensus       220 IEMAEG~PPYsDIHPMR---AIFMIPT~PPPTF~K-------------------------PE~WS~~F~DFi~~CLiK~P  271 (502)
T KOG0574|consen  220 IEMAEGRPPYSDIHPMR---AIFMIPTKPPPTFKK-------------------------PEEWSSEFNDFIRSCLIKKP  271 (502)
T ss_pred             hhhhcCCCCcccccccc---eeEeccCCCCCCCCC-------------------------hHhhhhHHHHHHHHHhcCCH
Confidence            99999999997655433   333333333332110                         11246889999999999999


Q ss_pred             CCCCCHHHHhcCCcccccc
Q psy7274         166 HKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~  184 (308)
                      ++|.||-++++|||.+...
T Consensus       272 E~R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  272 EERKTALRLCEHTFIKNAP  290 (502)
T ss_pred             HHHHHHHHHhhhhhhcCCC
Confidence            9999999999999998743

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.90  E-value=3.7e-24  Score=206.42  Aligned_cols=148  Identities=22%  Similarity=0.363  Sum_probs=109.5

Q ss_pred             CCCCCCCCCCcccCcccc----------ccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCC
Q psy7274           5 NPHKRIGVEGALAHPYLE----------QYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYT   73 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~----------~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~   73 (308)
                      -.||||||+||||+....          ..+..+.+||+|||++........    ....+||+.|+|||++.+. ..++
T Consensus       146 IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~----~~s~vGTp~YmAPEvL~ge~~~~s  221 (1021)
T PTZ00266        146 VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM----AHSCVGTPYYWSPELLLHETKSYD  221 (1021)
T ss_pred             ceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc----ccccCCCccccCHHHHhccCCCCC
Confidence            379999999999963211          123455699999999987643221    2345899999999998643 3588


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      .++|||||||++|+|++|..||...+...++......  .+                        ..    .....+.++
T Consensus       222 ~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~--~p------------------------~l----pi~~~S~eL  271 (1021)
T PTZ00266        222 DKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKR--GP------------------------DL----PIKGKSKEL  271 (1021)
T ss_pred             chhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhc--CC------------------------CC----CcCCCCHHH
Confidence            9999999999999999999999776554443322211  00                        00    012357889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCccccccCC
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .+||..||..+|.+||++.++|.|+|+.....+
T Consensus       272 ~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p  304 (1021)
T PTZ00266        272 NILIKNLLNLSAKERPSALQCLGYQIIKNVGPP  304 (1021)
T ss_pred             HHHHHHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence            999999999999999999999999999876443

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.90  E-value=5.6e-24  Score=184.22  Aligned_cols=141  Identities=24%  Similarity=0.421  Sum_probs=108.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||++.........   .....|+..|+|||++.+ ..++.++|+||+||++
T Consensus       137 ~H~dl~p~Nil~~-------~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l  205 (285)
T cd06648         137 IHRDIKSDSILLT-------SDGRVKLSDFGFCAQVSKEVPR---RKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMV  205 (285)
T ss_pred             ecCCCChhhEEEc-------CCCcEEEcccccchhhccCCcc---cccccCCccccCHHHhcC-CCCCCcccHHHHHHHH
Confidence            6999999999999       8899999999998765432211   233578999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+....+..+... ..+.                           ......++..+.+++.+||..+|
T Consensus       206 ~ell~g~~p~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~~~~~l~~li~~~l~~~p  257 (285)
T cd06648         206 IEMVDGEPPYFNEPPLQAMKRIRDN-LPPK---------------------------LKNLHKVSPRLRSFLDRMLVRDP  257 (285)
T ss_pred             HHHHhCCCCCcCCCHHHHHHHHHhc-CCCC---------------------------CcccccCCHHHHHHHHHHcccCh
Confidence            9999999999876655444433221 0000                           00012357889999999999999


Q ss_pred             CCCCCHHHHhcCCccccccC
Q psy7274         166 HKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~  185 (308)
                      .+|||+.++++|+||+....
T Consensus       258 ~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         258 AQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             hhCcCHHHHccCcccccCCC
Confidence            99999999999999987544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0577|consensus

Probab=99.90  E-value=1.4e-24  Score=193.13  Aligned_cols=136  Identities=24%  Similarity=0.409  Sum_probs=113.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG   82 (308)
                      -.|||||..|||++       ..|.|||+|||.|....+       ..++|||++||||||++.  ...|+-++||||+|
T Consensus       147 ~IHRDiKAGNILLs-------e~g~VKLaDFGSAsi~~P-------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLG  212 (948)
T KOG0577|consen  147 RIHRDIKAGNILLS-------EPGLVKLADFGSASIMAP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  212 (948)
T ss_pred             HHhhhccccceEec-------CCCeeeeccccchhhcCc-------hhcccCCccccchhHheeccccccCCccceeecc
Confidence            36999999999999       999999999999987654       356799999999999973  24599999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++..||.-++||+..-+....+..|...-. |..                     .       .+..|..+..|+..||+
T Consensus       213 ITCIELAERkPPlFnMNAMSALYHIAQNes-PtL---------------------q-------s~eWS~~F~~Fvd~CLq  263 (948)
T KOG0577|consen  213 ITCIELAERKPPLFNMNAMSALYHIAQNES-PTL---------------------Q-------SNEWSDYFRNFVDSCLQ  263 (948)
T ss_pred             chhhhhhhcCCCccCchHHHHHHHHHhcCC-CCC---------------------C-------CchhHHHHHHHHHHHHh
Confidence            999999999999888888777777764311 100                     0       12357889999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .-|.+|||.+++|+|+|...-
T Consensus       264 KipqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  264 KIPQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             hCcccCCcHHHHhhcchhccC
Confidence            999999999999999999754

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=5.2e-24  Score=182.35  Aligned_cols=137  Identities=26%  Similarity=0.486  Sum_probs=104.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC---CCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH---TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      .||||||+||+++       .++.+||+|||+++........   ........|+..|+|||.+.+ ..++.++|+||+|
T Consensus       128 vH~di~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG  199 (267)
T cd06628         128 IHRDIKGANILVD-------NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLG  199 (267)
T ss_pred             ccccCCHHHEEEc-------CCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHH
Confidence            6999999999998       8999999999999876532111   111233568889999999864 4588999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|+.||.+.+....+..+.....                              .......+..+.++|.+||+
T Consensus       200 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06628         200 CLVVEMLTGKHPFPDCTQLQAIFKIGENAS------------------------------PEIPSNISSEAIDFLEKTFE  249 (267)
T ss_pred             HHHHHHhhCCCCCCCccHHHHHHHHhccCC------------------------------CcCCcccCHHHHHHHHHHcc
Confidence            999999999999987654333322211000                              01112457889999999999


Q ss_pred             cCCCCCCCHHHHhcCCcc
Q psy7274         163 FNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f  180 (308)
                      .||.+||++.++++||||
T Consensus       250 ~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         250 IDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CCchhCcCHHHHhhCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=7.1e-24  Score=186.18  Aligned_cols=142  Identities=26%  Similarity=0.428  Sum_probs=108.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC--------------------------CCccCccccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT--------------------------GFLTEYVATR   58 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~--------------------------~~~~~~~gt~   58 (308)
                      -.||||||+||+++       .++.++|+|||++..........                          ......+||.
T Consensus       124 i~H~dlkp~Nili~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  196 (316)
T cd05574         124 IVYRDLKPENILLH-------ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTE  196 (316)
T ss_pred             eeccCCChHHeEEc-------CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCcc
Confidence            37999999999999       88999999999987653221100                          0112457899


Q ss_pred             ccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCC
Q psy7274          59 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKP  138 (308)
Q Consensus        59 ~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  138 (308)
                      .|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+....+..+......                         
T Consensus       197 ~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------------------------  250 (316)
T cd05574         197 EYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVT-------------------------  250 (316)
T ss_pred             CCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCcc-------------------------
Confidence            9999999865 45899999999999999999999999888766555443311000                         


Q ss_pred             CCCccccCCCCChhHHHHHHHhcccCCCCCCC----HHHHhcCCccccc
Q psy7274         139 KVPWEILYPNADPNALDLLGKMLTFNPHKRIG----VEDALAHPYLEQY  183 (308)
Q Consensus       139 ~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t----~~eil~hp~f~~~  183 (308)
                         +. .....+..+.++|.+||..||++|+|    +++++.||||+..
T Consensus       251 ---~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         251 ---FP-GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             ---CC-CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence               00 00125789999999999999999999    9999999999763

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.90  E-value=4.2e-24  Score=182.72  Aligned_cols=143  Identities=24%  Similarity=0.345  Sum_probs=107.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+||+++       .++.+||+|||++.......... ......+|+..|+|||++.....++.++|+||+||+
T Consensus       124 ~h~~l~p~ni~~~-------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i  196 (267)
T cd06610         124 IHRDIKAGNILLG-------EDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGIT  196 (267)
T ss_pred             ecCCCCHHhEEEc-------CCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHH
Confidence            6999999999999       88999999999998765432221 112345789999999998765468999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||...+....+..+...   ..+                      ...........+..+.+++.+||..|
T Consensus       197 ~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~~~~~~~~~li~~~l~~~  251 (267)
T cd06610         197 AIELATGAAPYSKYPPMKVLMLTLQN---DPP----------------------SLETGADYKKYSKSFRKMISLCLQKD  251 (267)
T ss_pred             HHHHHhCCCCccccChhhhHHHHhcC---CCC----------------------CcCCccccccccHHHHHHHHHHcCCC
Confidence            99999999999776554333332211   000                      00000112356789999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |++|||++++++||||
T Consensus       252 p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         252 PSKRPTAEELLKHKFF  267 (267)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.90  E-value=5e-24  Score=185.55  Aligned_cols=139  Identities=27%  Similarity=0.426  Sum_probs=106.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.........   .....|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       138 ~H~dLkp~Nill~-------~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil  206 (296)
T cd06654         138 IHRDIKSDNILLG-------MDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  206 (296)
T ss_pred             ccCCCCHHHEEEc-------CCCCEEECccccchhccccccc---cCcccCCccccCHHHHcC-CCCCccchHHHHHHHH
Confidence            6999999999998       8899999999998865432211   234578899999998864 5588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+....+..+.. .+.+..                           .....++..+.+++.+||..+|
T Consensus       207 ~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~~p  258 (296)
T cd06654         207 IEMIEGEPPYLNENPLRALYLIAT-NGTPEL---------------------------QNPEKLSAIFRDFLNRCLDMDV  258 (296)
T ss_pred             HHHHhCCCCCCCCCHHHhHHHHhc-CCCCCC---------------------------CCccccCHHHHHHHHHHCcCCc
Confidence            999999999987765443322211 111100                           0112456889999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||...
T Consensus       259 ~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         259 EKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             ccCcCHHHHhhChhhhcc
Confidence            999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.90  E-value=8e-24  Score=183.66  Aligned_cols=138  Identities=20%  Similarity=0.311  Sum_probs=104.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC----CCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK----GYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .++.+||+|||+++........   .....|+..|+|||++....    .++.++|+||+
T Consensus       150 vH~dlkp~nili~-------~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl  219 (291)
T cd06639         150 IHRDVKGNNILLT-------TEGGVKLVDFGVSAQLTSTRLR---RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSL  219 (291)
T ss_pred             eccCCCHHHEEEc-------CCCCEEEeecccchhccccccc---ccCccCCccccChhhhcCCCCcccccCCccchHHH
Confidence            7999999999998       8899999999999875432211   12347889999999875322    36889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|+.||...+....+..+...   +.+.                         .......+..+.+||.+||
T Consensus       220 Gvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~~-------------------------~~~~~~~~~~l~~li~~~l  271 (291)
T cd06639         220 GITAIELGDGDPPLFDMHPVKTLFKIPRN---PPPT-------------------------LLHPEKWCRSFNHFISQCL  271 (291)
T ss_pred             HHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CCCC-------------------------CCcccccCHHHHHHHHHHh
Confidence            99999999999999876654443332211   1000                         0001234578999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~  181 (308)
                      ..+|++||++.++++||||+
T Consensus       272 ~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         272 IKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             hcChhhCcCHHHHhcCcccC
Confidence            99999999999999999994

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=5e-24  Score=183.31  Aligned_cols=138  Identities=22%  Similarity=0.384  Sum_probs=107.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++........   .....|+..|+|||++.+ ..++.++|+||+||++
T Consensus       120 ~h~dl~p~ni~i~-------~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il  188 (274)
T cd06609         120 IHRDIKAANILLS-------EEGDVKLADFGVSGQLTSTMSK---RNTFVGTPFWMAPEVIKQ-SGYDEKADIWSLGITA  188 (274)
T ss_pred             ccCCCCHHHEEEC-------CCCCEEEcccccceeecccccc---cccccCCccccChhhhcc-CCCCchhhHHHHHHHH
Confidence            7999999999999       8999999999999877543211   244578889999999865 4489999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+.......+.....                         +..    .....+.++.+++.+||..+|
T Consensus       189 ~~l~tg~~p~~~~~~~~~~~~~~~~~~-------------------------~~~----~~~~~~~~~~~~l~~~l~~~p  239 (274)
T cd06609         189 IELAKGEPPLSDLHPMRVLFLIPKNNP-------------------------PSL----EGNKFSKPFKDFVSLCLNKDP  239 (274)
T ss_pred             HHHHhCCCCcccCchHHHHHHhhhcCC-------------------------CCC----cccccCHHHHHHHHHHhhCCh
Confidence            999999999977654333322221100                         000    001257889999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ++|||++++++||||...
T Consensus       240 ~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         240 KERPSAKELLKHKFIKKA  257 (274)
T ss_pred             hhCcCHHHHhhChhhcCC
Confidence            999999999999999763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.90  E-value=3e-24  Score=185.31  Aligned_cols=146  Identities=22%  Similarity=0.360  Sum_probs=105.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+|||++       .++.+||+|||++.......     .+..+||..|+|||++.+ ..++.++|+||+||+
T Consensus       116 i~H~dlkp~Nill~-------~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~  182 (279)
T cd06619         116 ILHRDVKPSNMLVN-------TRGQVKLCDFGVSTQLVNSI-----AKTYVGTNAYMAPERISG-EQYGIHSDVWSLGIS  182 (279)
T ss_pred             EeeCCCCHHHEEEC-------CCCCEEEeeCCcceeccccc-----ccCCCCChhhcCceeecC-CCCCCcchHHHHHHH
Confidence            36999999999999       89999999999998654321     244589999999999864 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.........         .......        ...... ....    ......++++.+++.+||+.+
T Consensus       183 l~~l~~g~~pf~~~~~~~~~---------~~~~~~~--------~~~~~~-~~~~----~~~~~~~~~~~~li~~~l~~~  240 (279)
T cd06619         183 FMELALGRFPYPQIQKNQGS---------LMPLQLL--------QCIVDE-DPPV----LPVGQFSEKFVHFITQCMRKQ  240 (279)
T ss_pred             HHHHHhCCCCchhhcccccc---------cchHHHH--------HHHhcc-CCCC----CCCCcCCHHHHHHHHHHhhCC
Confidence            99999999999653211100         0000000        000000 0000    011235788999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~  185 (308)
                      |.+||+++++++||||.....
T Consensus       241 P~~Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         241 PKERPAPENLMDHPFIVQYND  261 (279)
T ss_pred             hhhCCCHHHHhcCcccccccC
Confidence            999999999999999987633

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.90  E-value=3.5e-24  Score=186.59  Aligned_cols=140  Identities=26%  Similarity=0.433  Sum_probs=106.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||++.........   .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       136 i~H~dL~p~Nili~-------~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvi  204 (297)
T cd06656         136 VIHRDIKSDNILLG-------MDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIM  204 (297)
T ss_pred             cccCCCCHHHEEEC-------CCCCEEECcCccceEccCCccC---cCcccCCccccCHHHHcC-CCCCcHHHHHHHHHH
Confidence            37999999999999       8899999999999865433211   234578899999999864 558899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++++++|..||.+.+....+..+.. .+.+..                           ......+..+.+|+.+||..+
T Consensus       205 l~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~  256 (297)
T cd06656         205 AIEMVEGEPPYLNENPLRALYLIAT-NGTPEL---------------------------QNPERLSAVFRDFLNRCLEMD  256 (297)
T ss_pred             HHHHHhCCCCCCCCCcchheeeecc-CCCCCC---------------------------CCccccCHHHHHHHHHHccCC
Confidence            9999999999977654332221110 111110                           011235678999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+||+++++++||||+..
T Consensus       257 p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         257 VDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             hhhCcCHHHHhcCchhccc
Confidence            9999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.90  E-value=6.4e-24  Score=181.86  Aligned_cols=138  Identities=25%  Similarity=0.347  Sum_probs=101.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .||||||+||+++       .++.+||+|||++........   ......||..|+|||++..  ...++.++|+||+||
T Consensus       128 ~H~dlkp~nili~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~  197 (267)
T cd06645         128 MHRDIKGANILLT-------DNGHVKLADFGVSAQITATIA---KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGI  197 (267)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEECcceeeeEccCccc---ccccccCcccccChhhhccccCCCCCchhhhHHHHH
Confidence            6999999999998       889999999999876543211   1244578999999998742  234788999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|..||........+..+...  ...+                     +  .+ .....++..+.+++.+||..
T Consensus       198 il~~l~~~~~p~~~~~~~~~~~~~~~~--~~~~---------------------~--~~-~~~~~~~~~~~~li~~~l~~  251 (267)
T cd06645         198 TAIELAELQPPMFDLHPMRALFLMTKS--NFQP---------------------P--KL-KDKMKWSNSFHHFVKMALTK  251 (267)
T ss_pred             HHHHHhcCCCCcccccchhhHHhhhcc--CCCC---------------------C--cc-cccCCCCHHHHHHHHHHccC
Confidence            999999999998654433222211110  0000                     0  00 00113567899999999999


Q ss_pred             CCCCCCCHHHHhcCCc
Q psy7274         164 NPHKRIGVEDALAHPY  179 (308)
Q Consensus       164 dP~~R~t~~eil~hp~  179 (308)
                      +|++|||++++++|||
T Consensus       252 ~P~~R~~~~~ll~~~~  267 (267)
T cd06645         252 NPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CchhCcCHHHHhcCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.90  E-value=5.7e-24  Score=187.78  Aligned_cols=169  Identities=18%  Similarity=0.189  Sum_probs=105.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC----CCCccCcccccccchhhHhhCC-CCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH----TGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWS   80 (308)
                      .||||||+|||++       .++.++++|||.+.........    .......+++..|+|||++.+. ..++.++||||
T Consensus       123 iH~dlkp~Nil~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws  195 (327)
T cd08227         123 VHRSVKASHILIS-------VDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS  195 (327)
T ss_pred             ecCCCChhhEEEe-------cCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHH
Confidence            6999999999998       8899999999876543211110    0111223577889999998653 35899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCCh-hhHhhhhhHHHHH------Hhh----------cCCCCCCCCcc
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTP-EDLSCIINEKARS------YLQ----------SLPFKPKVPWE  143 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~-~~~~~~~~~~~~~------~~~----------~~~~~~~~~~~  143 (308)
                      +||+++||++|+.||.+............  +..+. .............      ...          ..+........
T Consensus       196 lG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (327)
T cd08227         196 VGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSH  273 (327)
T ss_pred             HHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccc
Confidence            99999999999999976554333222211  11100 0000000000000      000          00000000011


Q ss_pred             ccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       144 ~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .....+++.+.+||.+||+.||.+|||++++++||||+..
T Consensus       274 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             ccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence            1223457889999999999999999999999999999764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.90  E-value=7.1e-24  Score=181.86  Aligned_cols=134  Identities=25%  Similarity=0.424  Sum_probs=101.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+||+++       .++ .++|+|||+++.....       ....|+..|+|||++.+ ..++.++|+||+||
T Consensus       130 i~H~dl~p~nil~~-------~~~~~~~l~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~  194 (267)
T PHA03390        130 IIHNDIKLENVLYD-------RAKDRIYLCDYGLCKIIGTP-------SCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGV  194 (267)
T ss_pred             eeeCCCCHHHEEEe-------CCCCeEEEecCccceecCCC-------ccCCCCCcccChhhhcC-CCCCchhhHHHHHH
Confidence            36999999999998       666 8999999998865432       23468889999999864 55899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHH-HHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQ-LNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~-l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++++|++|+.||.+...... ...+......                            .....+..++.+.+||.+||+
T Consensus       195 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~  246 (267)
T PHA03390        195 LTYELLTGKHPFKEDEDEELDLESLLKRQQK----------------------------KLPFIKNVSKNANDFVQSMLK  246 (267)
T ss_pred             HHHHHHHCCCCCCCCCcchhhHHHHHHhhcc----------------------------cCCcccccCHHHHHHHHHHhc
Confidence            99999999999975543221 1111110000                            001123578999999999999


Q ss_pred             cCCCCCCC-HHHHhcCCccc
Q psy7274         163 FNPHKRIG-VEDALAHPYLE  181 (308)
Q Consensus       163 ~dP~~R~t-~~eil~hp~f~  181 (308)
                      .+|.+|++ ++++|+||||+
T Consensus       247 ~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        247 YNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             cChhhCCchHHHHhcCCccc
Confidence            99999996 59999999995

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.90  E-value=5.9e-24  Score=186.50  Aligned_cols=167  Identities=16%  Similarity=0.165  Sum_probs=108.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC----CCCCccCcccccccchhhHhhCC-CCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD----HTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWS   80 (308)
                      .||||||+||+++       .++.+||+|||.+........    .........++..|+|||++.+. ..++.++|+||
T Consensus       123 vH~dlk~~Nili~-------~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws  195 (314)
T cd08216         123 IHRSVKASHILLS-------GDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYS  195 (314)
T ss_pred             ecCCCCcceEEEe-------cCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHH
Confidence            7999999999999       889999999999876532211    11112345678899999998643 35889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC---------CCCCCccccCCCCCh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF---------KPKVPWEILYPNADP  151 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~s~  151 (308)
                      +||++++|++|+.||........+..  ...+..... +...   ...........         .....-......++.
T Consensus       196 ~G~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (314)
T cd08216         196 VGITACELANGHVPFKDMPATQMLLE--KVRGTVPCL-LDKS---TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSE  269 (314)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHH--HHhccCccc-cccC---chhhhcCCcCcccccccccchhhhhhcchhhHHHH
Confidence            99999999999999987654332211  111111100 0000   00000000000         000000001112457


Q ss_pred             hHHHHHHHhcccCCCCCCCHHHHhcCCccccccC
Q psy7274         152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       152 ~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~  185 (308)
                      ++.+|+.+||+.||++|||++++|+||||+....
T Consensus       270 ~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~  303 (314)
T cd08216         270 HFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR  303 (314)
T ss_pred             HHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence            8899999999999999999999999999987653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.90  E-value=1.4e-23  Score=179.58  Aligned_cols=140  Identities=26%  Similarity=0.389  Sum_probs=105.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC---CCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH---DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~---~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      -.|+||||+||+++       +++.+||+|||++.......   ..........|+..|+|||++.+ ..++.++|+||+
T Consensus       123 i~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~sl  194 (265)
T cd06631         123 VVHRDIKGNNVMLM-------PNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSI  194 (265)
T ss_pred             cccCCcCHHhEEEC-------CCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcC-CCCcchhhHHHH
Confidence            36999999999999       88999999999998653211   11112344578999999999754 558999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|..||.+.+.......+....+.                            ........+.++.++|.+||
T Consensus       195 G~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~~l  246 (265)
T cd06631         195 GCTVFEMATGKPPLASMDRLAAMFYIGAHRGL----------------------------MPRLPDSFSAAAIDFVTSCL  246 (265)
T ss_pred             HHHHHHHHhCCCccccCChHHHHHHhhhccCC----------------------------CCCCCCCCCHHHHHHHHHHh
Confidence            99999999999999765543332222211110                            01112346789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      ..+|.+|||+.++++||||
T Consensus       247 ~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         247 TRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             cCCcccCCCHHHHhcCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.90  E-value=8.6e-24  Score=182.60  Aligned_cols=133  Identities=20%  Similarity=0.236  Sum_probs=102.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++........ .......++..|+|||.+.+ ..++.++||||+||++
T Consensus       146 ~H~dlkp~Nil~~-------~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il  216 (283)
T cd05048         146 VHRDLAARNCLVG-------EGLTVKISDFGLSRDIYSADYY-RVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVL  216 (283)
T ss_pred             eccccccceEEEc-------CCCcEEECCCcceeeccccccc-cccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHH
Confidence            7999999999998       8899999999999865432211 11234467889999998865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+.+..+....+......                              ......+.++.+|+.+||..|
T Consensus       217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~------------------------------~~~~~~~~~~~~l~~~c~~~~  266 (283)
T cd05048         217 WEIFSYGLQPYYGFSNQEVIEMIRSRQLL------------------------------PCPEDCPARVYALMIECWNEI  266 (283)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcC------------------------------CCcccCCHHHHHHHHHHccCC
Confidence            99998 99999887765544443321100                              011346789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+||++.+++++
T Consensus       267 p~~Rp~~~~i~~~  279 (283)
T cd05048         267 PARRPRFKDIHTR  279 (283)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.90  E-value=1.1e-23  Score=184.31  Aligned_cols=164  Identities=22%  Similarity=0.317  Sum_probs=109.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||++.......     ....+|+..|+|||++.+ ..++.++|+||+||+
T Consensus       121 i~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~  187 (308)
T cd06615         121 IMHRDVKPSNILVN-------SRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQG-THYTVQSDIWSLGLS  187 (308)
T ss_pred             EEECCCChHHEEEe-------cCCcEEEccCCCcccccccc-----cccCCCCcCccChhHhcC-CCCCccchHHHHHHH
Confidence            36999999999998       88999999999987653221     244588999999998754 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhh------------HhhhhhHHHHHHhhcCCCCCCCCccccCCCCChh
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPED------------LSCIINEKARSYLQSLPFKPKVPWEILYPNADPN  152 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  152 (308)
                      +++|++|+.||.+.+.......+...........            ...........+..... .+..    .....+.+
T Consensus       188 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~  262 (308)
T cd06615         188 LVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEP-PPKL----PSGAFSDE  262 (308)
T ss_pred             HHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCC-CccC----cCcccCHH
Confidence            9999999999987663332222211100000000            00000000001110000 0111    11135788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCCccccccCC
Q psy7274         153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       153 ~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      +.+|+.+||..+|++|||++++++||||.....+
T Consensus       263 ~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  296 (308)
T cd06615         263 FQDFVDKCLKKNPKERADLKELTKHPFIKRAELE  296 (308)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence            9999999999999999999999999999775433

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.90  E-value=1.4e-23  Score=178.45  Aligned_cols=137  Identities=24%  Similarity=0.429  Sum_probs=103.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||+|+||+++       .++.+||+|||++.........   .....|+..|+|||++.+ ..++.++||||+||+
T Consensus       120 i~H~dl~~~ni~~~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~i  188 (256)
T cd06612         120 KIHRDIKAGNILLN-------EEGQAKLADFGVSGQLTDTMAK---RNTVIGTPFWMAPEVIQE-IGYNNKADIWSLGIT  188 (256)
T ss_pred             cccCCCCcceEEEC-------CCCcEEEcccccchhcccCccc---cccccCCccccCHHHHhc-CCCCchhhHHHHHHH
Confidence            37999999999999       8899999999999876543211   233467889999999764 568999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||...........+..   ....                         ........+..+.++|.+||+.|
T Consensus       189 l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~-------------------------~~~~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd06612         189 AIEMAEGKPPYSDIHPMRAIFMIPN---KPPP-------------------------TLSDPEKWSPEFNDFVKKCLVKD  240 (256)
T ss_pred             HHHHHhCCCCCCCcchhhhhhhhcc---CCCC-------------------------CCCchhhcCHHHHHHHHHHHhcC
Confidence            9999999999976554332221110   0000                         00011235678999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|||++++++||||
T Consensus       241 P~~Rps~~~il~~~~~  256 (256)
T cd06612         241 PEERPSAIQLLQHPFI  256 (256)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0584|consensus

Probab=99.90  E-value=4.7e-24  Score=191.16  Aligned_cols=136  Identities=20%  Similarity=0.395  Sum_probs=111.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||.+||+|++      ..|.|||+|+|+|.......     ..+.+||+.+||||++-  ..|+..+||||||+++
T Consensus       167 IHRDLKCDNIFinG------~~G~VKIGDLGLAtl~r~s~-----aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCm  233 (632)
T KOG0584|consen  167 IHRDLKCDNIFVNG------NLGEVKIGDLGLATLLRKSH-----AKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCM  233 (632)
T ss_pred             cccccccceEEEcC------CcCceeecchhHHHHhhccc-----cceeccCccccChHHHh--hhcchhhhhhhhhHHH
Confidence            59999999999994      77999999999999875443     35579999999999874  5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      .||+|+..||....+..|+.+-+  .....|..+.++                          -.+++++||.+||.. .
T Consensus       234 LEMvT~eYPYsEC~n~AQIYKKV--~SGiKP~sl~kV--------------------------~dPevr~fIekCl~~-~  284 (632)
T KOG0584|consen  234 LEMVTSEYPYSECTNPAQIYKKV--TSGIKPAALSKV--------------------------KDPEVREFIEKCLAT-K  284 (632)
T ss_pred             HHHHhccCChhhhCCHHHHHHHH--HcCCCHHHhhcc--------------------------CCHHHHHHHHHHhcC-c
Confidence            99999999998766655544322  222344444433                          258999999999999 9


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ..|+|+.|+|.||||..-
T Consensus       285 ~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  285 SERLSAKELLKDPFFDED  302 (632)
T ss_pred             hhccCHHHHhhChhhccc
Confidence            999999999999999774

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.90  E-value=1.7e-23  Score=182.00  Aligned_cols=140  Identities=15%  Similarity=0.113  Sum_probs=100.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||+|+.........    .......||+.|+|||++.+ ..++.++||||+
T Consensus       148 iHrDiKp~Nill~-------~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSl  219 (294)
T PHA02882        148 SHGDIKPENIMVD-------GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESL  219 (294)
T ss_pred             ecCCCCHHHEEEc-------CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHH
Confidence            6999999999999       88999999999998764321111    11233479999999998764 559999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||+++||++|+.||.+.+....+......      ..+..+...                 ....+..+..+.+++..|+
T Consensus       220 G~~l~el~~g~~P~~~~~~~~~~~~~~~~------~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~  276 (294)
T PHA02882        220 GYCMLKWAGIKLPWKGFGHNGNLIHAAKC------DFIKRLHEG-----------------KIKIKNANKFIYDFIECVT  276 (294)
T ss_pred             HHHHHHHHhCCCCCCccccchHHHHHhHH------HHHHHhhhh-----------------hhccCCCCHHHHHHHHHHH
Confidence            99999999999999877432222211110      000000000                 0012345688999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q psy7274         162 TFNPHKRIGVEDALA  176 (308)
Q Consensus       162 ~~dP~~R~t~~eil~  176 (308)
                      ..+|.+||+.+++++
T Consensus       277 ~~~~~~rp~~~~l~~  291 (294)
T PHA02882        277 KLSYEEKPDYDALIK  291 (294)
T ss_pred             hCCCCCCCCHHHHHH
Confidence            999999999999864

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.90  E-value=1.3e-23  Score=179.23  Aligned_cols=135  Identities=24%  Similarity=0.467  Sum_probs=106.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++........   ......|+..|+|||++.+ ..++.++|+||+||+
T Consensus       131 i~h~dl~p~nili~-------~~~~~kl~d~g~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~i  199 (265)
T cd08217         131 VLHRDLKPANIFLD-------ANNNVKLGDFGLAKILGHDSS---FAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCL  199 (265)
T ss_pred             ceecCCCHHHEEEe-------cCCCEEEecccccccccCCcc---cccccccCCCccChhhhcC-CCCCchhHHHHHHHH
Confidence            36999999999999       889999999999987654321   1234578999999999865 458899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+.......+....                              ...+....+..+.+++.+||..+
T Consensus       200 l~~l~~g~~p~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~l~~~~l~~~  249 (265)
T cd08217         200 IYELCALSPPFTARNQLQLASKIKEGK------------------------------FRRIPYRYSSELNEVIKSMLNVD  249 (265)
T ss_pred             HHHHHHCCCcccCcCHHHHHHHHhcCC------------------------------CCCCccccCHHHHHHHHHHccCC
Confidence            999999999998876443333222110                              01112245789999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |++|||+.++++|||+
T Consensus       250 p~~Rp~~~~il~~~~~  265 (265)
T cd08217         250 PDKRPSTEELLQLPLI  265 (265)
T ss_pred             cccCCCHHHHhhCCCC
Confidence            9999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG4236|consensus

Probab=99.90  E-value=3.1e-25  Score=194.88  Aligned_cols=139  Identities=34%  Similarity=0.617  Sum_probs=109.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+|||+..    -+.-..+||||||+||.+...    .+..+.+||+.|.|||++.+ ++|+...||||+|+|+
T Consensus       686 vHCDLKPENVLLas----~~~FPQvKlCDFGfARiIgEk----sFRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIi  756 (888)
T KOG4236|consen  686 VHCDLKPENVLLAS----ASPFPQVKLCDFGFARIIGEK----SFRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVII  756 (888)
T ss_pred             eeccCCchheeecc----CCCCCceeeccccceeecchh----hhhhhhcCCccccCHHHHhh-ccccccccceeeeEEE
Confidence            69999999999971    123357999999999998643    33467899999999999874 7799999999999999


Q ss_pred             HHHhhCCCCCCCCCH-HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHY-LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |--++|..||..+.+ .+|++... .+.                         +..||    ..++++++|||..+|+..
T Consensus       757 YVsLSGTFPFNEdEdIndQIQNAa-FMy-------------------------Pp~PW----~eis~~AidlIn~LLqVk  806 (888)
T KOG4236|consen  757 YVSLSGTFPFNEDEDINDQIQNAA-FMY-------------------------PPNPW----SEISPEAIDLINNLLQVK  806 (888)
T ss_pred             EEEecccccCCCccchhHHhhccc-ccc-------------------------CCCch----hhcCHHHHHHHHHHHHHH
Confidence            999999999965433 33333211 111                         22222    256899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      -.+|.|++..|.|||++++
T Consensus       807 m~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  807 MRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHhcchHhhccchhhhcc
Confidence            9999999999999999875

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.1e-23  Score=180.77  Aligned_cols=137  Identities=24%  Similarity=0.394  Sum_probs=103.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC----CCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----KGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiWSl   81 (308)
                      .||||+|+||+++       .++.+||+|||++........   ......|+..|+|||++...    ..++.++||||+
T Consensus       135 ~H~~l~p~ni~~~-------~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  204 (275)
T cd06608         135 IHRDIKGQNILLT-------KNAEVKLVDFGVSAQLDSTLG---RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSL  204 (275)
T ss_pred             ccCCCCHHHEEEc-------cCCeEEECCCccceecccchh---hhcCccccccccCHhHhcccccccCCccccccHHHh
Confidence            6999999999999       889999999999886543221   12345789999999987532    346788999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|+.||.+......+..+...   +.+.                      .   ......+..+.+||.+||
T Consensus       205 G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~----------------------~---~~~~~~~~~~~~li~~~l  256 (275)
T cd06608         205 GITAIELADGKPPLCDMHPMRALFKIPRN---PPPT----------------------L---KSPENWSKKFNDFISECL  256 (275)
T ss_pred             HHHHHHHHhCCCCccccchHHHHHHhhcc---CCCC----------------------C---CchhhcCHHHHHHHHHHh
Confidence            99999999999999765544433333211   0000                      0   001125678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      ..||.+|||++++++|||+
T Consensus       257 ~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         257 IKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hcChhhCcCHHHHhcCCCC
Confidence            9999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.90  E-value=1.6e-23  Score=179.27  Aligned_cols=138  Identities=23%  Similarity=0.474  Sum_probs=103.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+||+++       .++.+||+|||+++................|+..|+|||++.+ ..++.++|+||+||++
T Consensus       128 ~H~dl~p~nil~~-------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il  199 (265)
T cd06652         128 VHRDIKGANILRD-------SVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTV  199 (265)
T ss_pred             ecCCCCHHHEEec-------CCCCEEECcCccccccccccccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHH
Confidence            6999999999998       8899999999999865432111111334568899999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.........+.   ..+..                     +     ...+..+..+.++|++|+. +|
T Consensus       200 ~el~~g~~p~~~~~~~~~~~~~~---~~~~~---------------------~-----~~~~~~~~~~~~~i~~~l~-~p  249 (265)
T cd06652         200 VEMLTEKPPWAEFEAMAAIFKIA---TQPTN---------------------P-----VLPPHVSDHCRDFLKRIFV-EA  249 (265)
T ss_pred             HHHhhCCCCCCccchHHHHHHHh---cCCCC---------------------C-----CCchhhCHHHHHHHHHHhc-Ch
Confidence            99999999997654443332221   11100                     0     0112456789999999995 99


Q ss_pred             CCCCCHHHHhcCCccc
Q psy7274         166 HKRIGVEDALAHPYLE  181 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~  181 (308)
                      ++|||++++++|||++
T Consensus       250 ~~Rp~~~~il~~~~~~  265 (265)
T cd06652         250 KLRPSADELLRHTFVH  265 (265)
T ss_pred             hhCCCHHHHhcCcccC
Confidence            9999999999999983

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.90  E-value=1.1e-23  Score=181.78  Aligned_cols=139  Identities=24%  Similarity=0.400  Sum_probs=103.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC---CCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS---KGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DiWSl   81 (308)
                      -.||||||+||+++       .++.+||+|||+++.......    .+...|+..|+|||++.+.   ..++.++|+||+
T Consensus       125 i~h~dlkp~nil~~-------~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~sl  193 (283)
T cd06617         125 VIHRDVKPSNVLIN-------RNGQVKLCDFGISGYLVDSVA----KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSL  193 (283)
T ss_pred             eecCCCCHHHEEEC-------CCCCEEEeecccccccccccc----cccccCCccccChhhcCCcccccccCccccchhh
Confidence            36999999999999       889999999999986543211    1334688899999987542   347889999999


Q ss_pred             HHHHHHHhhCCCCCCCC-CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          82 GCILAEMISNRPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        82 G~il~ell~g~~pf~~~-~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      ||++++|++|+.||... ...+.+..+...   ..+                      ..    .....+.++.++|.+|
T Consensus       194 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~----------------------~~----~~~~~~~~l~~li~~~  244 (283)
T cd06617         194 GITMIELATGRFPYDSWKTPFQQLKQVVEE---PSP----------------------QL----PAEKFSPEFQDFVNKC  244 (283)
T ss_pred             HHHHHHHHhCCCCCCccccCHHHHHHHHhc---CCC----------------------CC----CccccCHHHHHHHHHH
Confidence            99999999999998642 222222222110   000                      00    0113578899999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |..+|.+|||++++++||||...
T Consensus       245 l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         245 LKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             ccCChhhCcCHHHHhcCchhhhc
Confidence            99999999999999999999774

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.4e-23  Score=179.59  Aligned_cols=140  Identities=23%  Similarity=0.359  Sum_probs=106.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .++.++|+|||++.........   .....||..|+|||++..    ...++.++|+||+
T Consensus       125 ~h~dl~p~nili~-------~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~sl  194 (280)
T cd06611         125 IHRDLKAGNILLT-------LDGDVKLADFGVSAKNKSTLQK---RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSL  194 (280)
T ss_pred             ccCCCChhhEEEC-------CCCCEEEccCccchhhcccccc---cceeecchhhcCHHHHhhcccCCCCCCccccHHHH
Confidence            6999999999999       8899999999998765432211   234578999999999752    2346789999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|+|++|+.||.+.+....+..+...  .+ +                         ........+.++.++|.+||
T Consensus       195 G~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~-~-------------------------~~~~~~~~~~~~~~li~~~l  246 (280)
T cd06611         195 GITLIELAQMEPPHHELNPMRVLLKILKS--EP-P-------------------------TLDQPSKWSSSFNDFLKSCL  246 (280)
T ss_pred             HHHHHHHHhCCCCcccCCHHHHHHHHhcC--CC-C-------------------------CcCCcccCCHHHHHHHHHHh
Confidence            99999999999999876654433332211  00 0                         00011245788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      +.+|.+||+++++++||||...
T Consensus       247 ~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         247 VKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             ccChhhCcCHHHHhcChhhccc
Confidence            9999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.89  E-value=9.3e-24  Score=180.53  Aligned_cols=140  Identities=25%  Similarity=0.478  Sum_probs=103.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||.+........     ....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       122 i~H~dl~~~ni~~~-------~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~  188 (265)
T cd06605         122 IIHRDVKPSNILVN-------SRGQIKLCDFGVSGQLVNSLA-----KTFVGTSSYMAPERIQG-NDYSVKSDIWSLGLS  188 (265)
T ss_pred             eecCCCCHHHEEEC-------CCCCEEEeecccchhhHHHHh-----hcccCChhccCHHHHcC-CCCCchhhHHHHHHH
Confidence            37999999999999       889999999999876543211     12578889999999865 568999999999999


Q ss_pred             HHHHhhCCCCCCCCCH--HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHY--LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~--~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++|++|..||...+.  ......+........+                      ..+    ....+.++.++|.+||.
T Consensus       189 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~----~~~~~~~~~~li~~~l~  242 (265)
T cd06605         189 LIELATGRFPYPPENDPPDGIFELLQYIVNEPPP----------------------RLP----SGKFSPDFQDFVNLCLI  242 (265)
T ss_pred             HHHHHhCCCCCCccccccccHHHHHHHHhcCCCC----------------------CCC----hhhcCHHHHHHHHHHcC
Confidence            9999999999865421  1111111111111100                      000    00157889999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .||.+|||+.+++.||||+.+
T Consensus       243 ~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         243 KDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             CCchhCcCHHHHhhCchhhcc
Confidence            999999999999999999765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.89  E-value=1.7e-23  Score=180.88  Aligned_cols=133  Identities=20%  Similarity=0.262  Sum_probs=102.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......++..|+|||.+.++ .++.++||||+||++
T Consensus       146 ~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l  216 (283)
T cd05091         146 VHKDLATRNVLVF-------DKLNVKISDLGLFREVYAADYY-KLMGNSLLPIRWMSPEAIMYG-KFSIDSDIWSYGVVL  216 (283)
T ss_pred             cccccchhheEec-------CCCceEecccccccccccchhe-eeccCccCCccccCHHHHhcC-CCCcchhHHHHHHHH
Confidence            7999999999998       8889999999999865432211 112334567889999998654 489999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+....+.+..+......+                              .....+..+.+|+.+||+.+
T Consensus       217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~~~~li~~cl~~~  266 (283)
T cd05091         217 WEVFSYGLQPYCGYSNQDVIEMIRNRQVLP------------------------------CPDDCPAWVYTLMLECWNEF  266 (283)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCC------------------------------CCCCCCHHHHHHHHHHhCCC
Confidence            99998 888998877665555544321111                              11246788999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+||++.++++.
T Consensus       267 p~~RP~~~~i~~~  279 (283)
T cd05091         267 PSRRPRFKDIHSR  279 (283)
T ss_pred             cccCCCHHHHHHH
Confidence            9999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.89  E-value=1.6e-23  Score=182.25  Aligned_cols=150  Identities=22%  Similarity=0.385  Sum_probs=109.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC---CCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS---KGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DiWSl   81 (308)
                      -.||||||+||+++       .++.+||+|||++........    .....++..|+|||.+.+.   ..++.++|+||+
T Consensus       136 i~H~dl~p~nill~-------~~~~~kL~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~sl  204 (296)
T cd06618         136 VIHRDVKPSNILLD-------ASGNVKLCDFGISGRLVDSKA----KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSL  204 (296)
T ss_pred             EecCCCcHHHEEEc-------CCCCEEECccccchhccCCCc----ccCCCCCccccCHhhcCCCCCccccccchhHHHH
Confidence            37999999999998       889999999999986543221    1233578899999997543   237889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCH-HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          82 GCILAEMISNRPIFPGKHY-LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      ||++++|++|+.||..... .+.+..+...   ..                   +   ..+   .....+.++.+|+.+|
T Consensus       205 G~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~-------------------~---~~~---~~~~~~~~l~~li~~~  256 (296)
T cd06618         205 GISLVELATGQFPYKNCKTEFEVLTKILQE---EP-------------------P---SLP---PNEGFSPDFCSFVDLC  256 (296)
T ss_pred             HHHHHHHHhCCCCCCcchhHHHHHHHHhcC---CC-------------------C---CCC---CCCCCCHHHHHHHHHH
Confidence            9999999999999965322 2222222110   00                   0   000   0013568899999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccccCCCCCCchh
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQYYDPADEPVSW  193 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~~~~~~~~~~~  193 (308)
                      |..||.+|||++++++|+||..+.....++..|
T Consensus       257 l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~  289 (296)
T cd06618         257 LTKDHRKRPKYRELLQHPFIRRYETAEVDVAGW  289 (296)
T ss_pred             ccCChhhCCCHHHHhcChhhhccchhHHHHHHH
Confidence            999999999999999999998876665555554

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.89  E-value=2.4e-23  Score=180.07  Aligned_cols=137  Identities=23%  Similarity=0.326  Sum_probs=102.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .++.+||+|||+++........   .....|+..|+|||++.+    ...++.++|+||+
T Consensus       146 ~H~dlkp~nili~-------~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  215 (286)
T cd06638         146 IHRDVKGNNILLT-------TEGGVKLVDFGVSAQLTSTRLR---RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL  215 (286)
T ss_pred             cccCCCHHhEEEC-------CCCCEEEccCCceeecccCCCc---cccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence            6999999999999       8899999999999876432211   234478999999998742    2347889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|+.||.+......+..+...   ..+                      ..   ......+..+.+||.+||
T Consensus       216 Gvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~----------------------~~---~~~~~~~~~~~~li~~~l  267 (286)
T cd06638         216 GITAIELGDGDPPLADLHPMRALFKIPRN---PPP----------------------TL---HQPELWSNEFNDFIRKCL  267 (286)
T ss_pred             HHHHHHHhcCCCCCCCCchhHHHhhcccc---CCC----------------------cc---cCCCCcCHHHHHHHHHHc
Confidence            99999999999999765543332221110   000                      00   001124678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      +.||++|||+.++++|+||
T Consensus       268 ~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         268 TKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cCCcccCCCHHHHhhcccC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.9e-23  Score=178.19  Aligned_cols=137  Identities=29%  Similarity=0.483  Sum_probs=105.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++....       .....|+..|+|||.+.+. .++.++|+||+||+
T Consensus       118 i~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~-------~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~i  182 (260)
T cd05611         118 IIHRDIKPENLLID-------QTGHLKLTDFGLSRNGLE-------NKKFVGTPDYLAPETILGV-GDDKMSDWWSLGCV  182 (260)
T ss_pred             eecCCCCHHHeEEC-------CCCcEEEeecccceeccc-------cccCCCCcCccChhhhcCC-CCcchhhhHHHHHH
Confidence            36999999999999       889999999999876432       1234688899999998654 48999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+.+....+..+........                           ......++..+.+++.+||..+
T Consensus       183 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~i~~~l~~~  235 (260)
T cd05611         183 IFEFLFGYPPFHAETPDAVFDNILSRRINWP---------------------------EEVKEFCSPEAVDLINRLLCMD  235 (260)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhcccCCC---------------------------CcccccCCHHHHHHHHHHccCC
Confidence            9999999999987765544433321100000                           0111246789999999999999


Q ss_pred             CCCCCC---HHHHhcCCccccc
Q psy7274         165 PHKRIG---VEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t---~~eil~hp~f~~~  183 (308)
                      |++|+|   ++|++.||||+..
T Consensus       236 p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         236 PAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             HHHccCCCcHHHHHcChHhhcC
Confidence            999995   4799999999763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG1290|consensus

Probab=99.89  E-value=1.8e-23  Score=182.21  Aligned_cols=152  Identities=29%  Similarity=0.477  Sum_probs=113.0

Q ss_pred             CCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCC---C---C
Q psy7274          26 DPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPG---K---H   99 (308)
Q Consensus        26 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~---~---~   99 (308)
                      .+..+||+|||.|+.....      ++.-+.|+.||||||+++ .+|++.+||||++|+++||+||..+|..   .   -
T Consensus       389 ~di~vKIaDlGNACW~~kh------FT~DIQTRQYRapEVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~r  461 (590)
T KOG1290|consen  389 CDIRVKIADLGNACWVHKH------FTEDIQTRQYRAPEVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSR  461 (590)
T ss_pred             cceeEEEeeccchhhhhhh------hchhhhhhhccCcceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCc
Confidence            4567999999999976432      566799999999999997 4599999999999999999999999943   2   2


Q ss_pred             HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC---CCCC-Cc--ccc-------CCCCChhHHHHHHHhcccCCC
Q psy7274         100 YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPF---KPKV-PW--EIL-------YPNADPNALDLLGKMLTFNPH  166 (308)
Q Consensus       100 ~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~--~~~-------~~~~s~~~~~ll~~~L~~dP~  166 (308)
                      +.+.+++|++.+|..+......-  ...+.|+.+...   ..+. +|  ..+       ......++.+||.-||+++|.
T Consensus       462 DEDHiA~i~ELLG~iPr~ia~~G--k~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~Pe  539 (590)
T KOG1290|consen  462 DEDHIALIMELLGKIPRKIALGG--KYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPE  539 (590)
T ss_pred             cHHHHHHHHHHHhhccHHHHhcC--cchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcc
Confidence            47899999999998877544321  223444433222   1111 11  110       111235678999999999999


Q ss_pred             CCCCHHHHhcCCccccccCC
Q psy7274         167 KRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       167 ~R~t~~eil~hp~f~~~~~~  186 (308)
                      +|+||.++|+|||+.....+
T Consensus       540 KR~tA~~cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  540 KRPTAAQCLKHPWLNPVAGP  559 (590)
T ss_pred             ccccHHHHhcCccccCCCCC
Confidence            99999999999999877555

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=4.2e-23  Score=177.78  Aligned_cols=141  Identities=22%  Similarity=0.431  Sum_probs=107.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||+|+||+++       .++.++|+|||++.........   .....|+..|+|||.+.++..++.++|+||+||+
T Consensus       122 i~H~dl~p~ni~i~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~  191 (277)
T cd06917         122 VIHRDIKAANILVT-------NTGNVKLCDFGVAALLNQNSSK---RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGIT  191 (277)
T ss_pred             cccCCcCHHHEEEc-------CCCCEEEccCCceeecCCCccc---cccccCCcceeCHHHhccCCccccchhHHHHHHH
Confidence            47999999999999       8899999999999876543211   2345789999999998765667899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+.........+..   ...                      +..+    ....+.++.+++.+||..|
T Consensus       192 l~~ll~g~~p~~~~~~~~~~~~~~~---~~~----------------------~~~~----~~~~~~~~~~~i~~~l~~~  242 (277)
T cd06917         192 IYEMATGNPPYSDVDAFRAMMLIPK---SKP----------------------PRLE----DNGYSKLLREFVAACLDEE  242 (277)
T ss_pred             HHHHHhCCCCCCCCChhhhhhcccc---CCC----------------------CCCC----cccCCHHHHHHHHHHcCCC
Confidence            9999999999977654322211110   000                      0000    0125688999999999999


Q ss_pred             CCCCCCHHHHhcCCcccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~  184 (308)
                      |++|||+.+++.|+||+...
T Consensus       243 p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         243 PKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             cccCcCHHHHhhChHhhccc
Confidence            99999999999999997643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.89  E-value=3.8e-23  Score=179.61  Aligned_cols=141  Identities=23%  Similarity=0.402  Sum_probs=109.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||++.........   .....|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       138 vH~dl~p~Nilv~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil  206 (292)
T cd06657         138 IHRDIKSDSILLT-------HDGRVKLSDFGFCAQVSKEVPR---RKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMV  206 (292)
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEcccccceeccccccc---ccccccCccccCHHHhcC-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999998765432211   233578899999998754 4588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+......+..+.....                       .    .+ ......+..+.+++.+||..+|
T Consensus       207 ~el~tg~~p~~~~~~~~~~~~~~~~~~-----------------------~----~~-~~~~~~~~~l~~li~~~l~~~P  258 (292)
T cd06657         207 IEMVDGEPPYFNEPPLKAMKMIRDNLP-----------------------P----KL-KNLHKVSPSLKGFLDRLLVRDP  258 (292)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhhCC-----------------------c----cc-CCcccCCHHHHHHHHHHHhCCc
Confidence            999999999988766554443322110                       0    00 0112457889999999999999


Q ss_pred             CCCCCHHHHhcCCccccccC
Q psy7274         166 HKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~  185 (308)
                      .+|++++++++||||.....
T Consensus       259 ~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         259 AQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             ccCcCHHHHhcChHHhccCC
Confidence            99999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.89  E-value=4.7e-23  Score=176.99  Aligned_cols=142  Identities=25%  Similarity=0.471  Sum_probs=104.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC-CCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK-GYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiWSlG~i   84 (308)
                      .||||||+||+++       .++.+||+|||+++......... ......|+..|+|||++.+.. .++.++|+||+||+
T Consensus       130 ~H~dl~~~nil~~-------~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~  201 (272)
T cd06629         130 LHRDLKADNLLVD-------ADGICKISDFGISKKSDDIYDND-QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCV  201 (272)
T ss_pred             eecCCChhhEEEc-------CCCeEEEeecccccccccccccc-ccccccCCccccCHHHhccccCCCCccchhHHHHHH
Confidence            6999999999998       88999999999998654321111 123456888999999986433 47899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++++++|..||........+..+....                        ..... .....+.++..+.++|.+||..+
T Consensus       202 l~~l~~g~~p~~~~~~~~~~~~~~~~~------------------------~~~~~-~~~~~~~~~~~~~~li~~~l~~~  256 (272)
T cd06629         202 VLEMFAGRRPWSDEEAIAAMFKLGNKR------------------------SAPPI-PPDVSMNLSPVALDFLNACFTIN  256 (272)
T ss_pred             HHHHHhCCCCCcCcchHHHHHHhhccc------------------------cCCcC-CccccccCCHHHHHHHHHHhcCC
Confidence            999999999996554433322211100                        00000 01122456789999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|||++++++||||
T Consensus       257 p~~Rps~~~il~~~~~  272 (272)
T cd06629         257 PDNRPTARELLQHPFI  272 (272)
T ss_pred             hhhCCCHHHHhhCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.89  E-value=2.9e-23  Score=183.96  Aligned_cols=134  Identities=24%  Similarity=0.333  Sum_probs=99.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .+...++..|+|||++.+ ..++.++||||+||++
T Consensus       195 vHrDikp~Nill~-------~~~~vkL~DfG~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l  265 (337)
T cd05054         195 IHRDLAARNILLS-------ENNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPESIFD-KVYTTQSDVWSFGVLL  265 (337)
T ss_pred             ecCCCCcceEEEe-------CCCcEEEeccccchhcccCcchhh-ccCCCCCccccCcHHhcC-CCCCccccHHHHHHHH
Confidence            7999999999999       889999999999987643221111 223456778999999865 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+....+.+.......-                        ..     ......++++.+++.+||+.+
T Consensus       266 ~el~t~g~~p~~~~~~~~~~~~~~~~~~------------------------~~-----~~~~~~~~~~~~l~~~cl~~~  316 (337)
T cd05054         266 WEIFSLGASPYPGVQIDEEFCRRLKEGT------------------------RM-----RAPEYATPEIYSIMLDCWHNN  316 (337)
T ss_pred             HHHHHcCCCCCCCCCccHHHHHHHhccC------------------------CC-----CCCccCCHHHHHHHHHHccCC
Confidence            99997 9999987543333222211000                        00     001235688999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++||+++++++|
T Consensus       317 p~~RPs~~ell~~  329 (337)
T cd05054         317 PEDRPTFSELVEI  329 (337)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0197|consensus

Probab=99.89  E-value=1.7e-23  Score=184.78  Aligned_cols=130  Identities=22%  Similarity=0.338  Sum_probs=106.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||...||||+       .+..+||+|||+|+....+....  ....--...|.|||.+.. ..++.++||||+|++|
T Consensus       325 IHRDLAARNiLV~-------~~~~vKIsDFGLAr~~~d~~Y~~--~~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL  394 (468)
T KOG0197|consen  325 IHRDLAARNILVD-------EDLVVKISDFGLARLIGDDEYTA--SEGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLL  394 (468)
T ss_pred             cchhhhhhheeec-------cCceEEEcccccccccCCCceee--cCCCCCCceecCHHHHhh-CCcccccceeehhhhH
Confidence            6999999999999       99999999999999554332111  112223457899999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||+| |+.|+++.+..+.+..+.+....|.|.                              .+++++.++|..||..+
T Consensus       395 ~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~------------------------------~CP~~vY~lM~~CW~~~  444 (468)
T KOG0197|consen  395 WELFTYGRVPYPGMSNEEVLELLERGYRLPRPE------------------------------GCPDEVYELMKSCWHED  444 (468)
T ss_pred             HHHhccCCCCCCCCCHHHHHHHHhccCcCCCCC------------------------------CCCHHHHHHHHHHhhCC
Confidence            99998 899999999999999998766655553                              45789999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |++|||.+.+.
T Consensus       445 P~~RPtF~~L~  455 (468)
T KOG0197|consen  445 PEDRPTFETLR  455 (468)
T ss_pred             cccCCCHHHHH
Confidence            99999998654

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=3.2e-23  Score=176.85  Aligned_cols=138  Identities=25%  Similarity=0.377  Sum_probs=103.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG~   83 (308)
                      .||||||+||+++       .++.+||+|||++........   .....+++..|+|||.+.+.  ..++.++|+||+||
T Consensus       123 ~h~dl~p~ni~i~-------~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~  192 (262)
T cd06613         123 IHRDIKGANILLT-------EDGDVKLADFGVSAQLTATIA---KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGI  192 (262)
T ss_pred             eecCCChhhEEEC-------CCCCEEECccccchhhhhhhh---ccccccCCccccCchhhcccccCCcCchhhhHHHHH
Confidence            7999999999999       889999999999986643221   12345788899999987543  15888999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|+.||.+.+.......+... +.....                         .......+.++.+++.+||..
T Consensus       193 ~l~~~~tg~~p~~~~~~~~~~~~~~~~-~~~~~~-------------------------~~~~~~~~~~~~~li~~~l~~  246 (262)
T cd06613         193 TAIELAELQPPMFDLHPMRALFLISKS-NFPPPK-------------------------LKDKEKWSPVFHDFIKKCLTK  246 (262)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhc-cCCCcc-------------------------ccchhhhhHHHHHHHHHHcCC
Confidence            999999999999877654443332211 000000                         000112457899999999999


Q ss_pred             CCCCCCCHHHHhcCCc
Q psy7274         164 NPHKRIGVEDALAHPY  179 (308)
Q Consensus       164 dP~~R~t~~eil~hp~  179 (308)
                      +|.+|||+++++.|+|
T Consensus       247 ~p~~Rpt~~~il~~~~  262 (262)
T cd06613         247 DPKKRPTATKLLQHPF  262 (262)
T ss_pred             ChhhCCCHHHHhcCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.89  E-value=2.4e-23  Score=177.20  Aligned_cols=134  Identities=25%  Similarity=0.457  Sum_probs=105.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||+|+||+++       .++.++|+|||++.........   .....|+..|+|||++.+ ..++.++|+||+||++
T Consensus       123 ~h~~l~~~nil~~-------~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~  191 (256)
T cd08218         123 LHRDIKSQNIFLT-------KDGTIKLGDFGIARVLNSTVEL---ARTCIGTPYYLSPEICEN-RPYNNKSDIWALGCVL  191 (256)
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEeeccceeecCcchhh---hhhccCCccccCHHHhCC-CCCCCccchhHHHHHH
Confidence            6999999999998       8899999999999866432211   123467889999999865 4588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||...+..+....+..  +..+                            ......+.++.++|.+||+.+|
T Consensus       192 ~~l~~g~~~~~~~~~~~~~~~~~~--~~~~----------------------------~~~~~~~~~~~~li~~~l~~~p  241 (256)
T cd08218         192 YEMCTLKHAFEAGNMKNLVLKIIR--GSYP----------------------------PVSSHYSYDLRNLVSQLFKRNP  241 (256)
T ss_pred             HHHHcCCCCccCCCHHHHHHHHhc--CCCC----------------------------CCcccCCHHHHHHHHHHhhCCh
Confidence            999999999977665554444321  1100                            0112457889999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+||++.++++||||
T Consensus       242 ~~Rp~~~~vl~~~~~  256 (256)
T cd08218         242 RDRPSVNSILEKNFI  256 (256)
T ss_pred             hhCcCHHHHhhCcCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.89  E-value=4.4e-23  Score=179.02  Aligned_cols=133  Identities=29%  Similarity=0.460  Sum_probs=106.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||.|||++       .++.+||+|||+++.....      ....+|+..|+|||.+.+ ..++.++|+||+||+
T Consensus       122 i~H~dl~p~nili~-------~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  187 (290)
T cd05580         122 IVYRDLKPENLLLD-------SDGYIKITDFGFAKRVKGR------TYTLCGTPEYLAPEIILS-KGYGKAVDWWALGIL  187 (290)
T ss_pred             EecCCCCHHHEEEC-------CCCCEEEeeCCCccccCCC------CCCCCCCccccChhhhcC-CCCCccccHHHHHHH
Confidence            36999999999999       8899999999999876433      233478999999998864 458899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+.......+...  .+                             .+....+..+.++|.+||..|
T Consensus       188 l~~l~~g~~p~~~~~~~~~~~~~~~~--~~-----------------------------~~~~~~~~~l~~li~~~l~~~  236 (290)
T cd05580         188 IYEMLAGYPPFFDDNPIQIYEKILEG--KV-----------------------------RFPSFFSPDAKDLIRNLLQVD  236 (290)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhcC--Cc-----------------------------cCCccCCHHHHHHHHHHccCC
Confidence            99999999999877754444433311  00                             011235788999999999999


Q ss_pred             CCCCC-----CHHHHhcCCcccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~  182 (308)
                      |.+|+     +++++++||||+.
T Consensus       237 p~~R~~~~~~~~~~l~~~~~~~~  259 (290)
T cd05580         237 LTKRLGNLKNGVNDIKNHPWFAG  259 (290)
T ss_pred             HHHccCcccCCHHHHHcCccccc
Confidence            99999     8999999999965

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.89  E-value=4.3e-23  Score=176.24  Aligned_cols=138  Identities=31%  Similarity=0.508  Sum_probs=106.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.+||+|||++........    ....+|+..|++||.+.+ ..++.++|+||+||+
T Consensus       114 ~~h~dl~~~nilv~-------~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~i  181 (262)
T cd05572         114 IIYRDLKPENLLLD-------SNGYVKLVDFGFAKKLKSGQK----TWTFCGTPEYVAPEIILN-KGYDFSVDYWSLGIL  181 (262)
T ss_pred             cccCCCCHHHEEEc-------CCCCEEEeeCCcccccCcccc----cccccCCcCccChhHhcC-CCCCChhhhhhhHHH
Confidence            47999999999999       889999999999987654321    233578899999998754 558999999999999


Q ss_pred             HHHHhhCCCCCCCCC--HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKH--YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~--~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +|+|++|..||.+..  ....+..+.....                        ...     .....+.++.++|.+||.
T Consensus       182 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~-----~~~~~~~~~~~~i~~~l~  232 (262)
T cd05572         182 LYELLTGRPPFGEDDEDPMEIYNDILKGNG------------------------KLE-----FPNYIDKAAKDLIKQLLR  232 (262)
T ss_pred             HHHHHhCCCCcCCCCCCHHHHHHHHhccCC------------------------CCC-----CCcccCHHHHHHHHHHcc
Confidence            999999999997765  3222222221000                        000     011246889999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCccccc
Q psy7274         163 FNPHKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t-----~~eil~hp~f~~~  183 (308)
                      .+|.+|+|     ++|+++||||+++
T Consensus       233 ~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         233 RNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CChhhCcCCcccCHHHHhcChhhhCC
Confidence            99999999     9999999999764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.89  E-value=5.3e-23  Score=179.82  Aligned_cols=141  Identities=23%  Similarity=0.336  Sum_probs=105.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC------------CCCCccCcccccccchhhHhhCCCCCC
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD------------HTGFLTEYVATRWYRAPEIMLNSKGYT   73 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~------------~~~~~~~~~gt~~y~aPE~l~~~~~~~   73 (308)
                      .||||||+||+++       .++.+||+|||+++.......            .........|+..|+|||.+.+ ..++
T Consensus       123 ~H~dl~p~NIll~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~  194 (305)
T cd05609         123 VHRDLKPDNLLIT-------SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYG  194 (305)
T ss_pred             cccCCchHHEEEC-------CCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCC
Confidence            6999999999999       889999999999874211100            0001123467889999999865 5589


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      .++|+||+||++++|++|..||.+....+.+..+.......                            .......+.++
T Consensus       195 ~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~  246 (305)
T cd05609         195 KPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW----------------------------PEGDEALPADA  246 (305)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC----------------------------CCccccCCHHH
Confidence            99999999999999999999998876555444433211000                            00012357889


Q ss_pred             HHHHHHhcccCCCCCCC---HHHHhcCCcccc
Q psy7274         154 LDLLGKMLTFNPHKRIG---VEDALAHPYLEQ  182 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t---~~eil~hp~f~~  182 (308)
                      .++|.+||..||++||+   +.++++||||..
T Consensus       247 ~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         247 QDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             HHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence            99999999999999998   799999999965

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.89  E-value=4.6e-23  Score=177.73  Aligned_cols=132  Identities=17%  Similarity=0.235  Sum_probs=100.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++........ .......++..|+|||++.+ ..++.++||||+||++
T Consensus       144 ~h~dlkp~nili~-------~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  214 (280)
T cd05049         144 VHRDLATRNCLVG-------YDLVVKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVL  214 (280)
T ss_pred             eccccccceEEEc-------CCCeEEECCcccceecccCcce-ecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHH
Confidence            6999999999999       8899999999999865332111 11123356788999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.+..+....+......                              ......+..+.+++.+||..|
T Consensus       215 ~e~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~  264 (280)
T cd05049         215 WEIFTYGKQPWYGLSNEEVIECITQGRLL------------------------------QRPRTCPSEVYDIMLGCWKRD  264 (280)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCcC------------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            99998 99999877765544444311100                              011245788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.|+++
T Consensus       265 p~~Rp~~~eil~  276 (280)
T cd05049         265 PQQRINIKDIHE  276 (280)
T ss_pred             cccCCCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.89  E-value=6.2e-23  Score=175.92  Aligned_cols=138  Identities=24%  Similarity=0.409  Sum_probs=100.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~i   84 (308)
                      .||||||+||+++.      .++.+||+|||++........   ......|+..|+|||++.+. ..++.++|+||+||+
T Consensus       130 ~h~dl~p~nil~~~------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvv  200 (268)
T cd06624         130 VHRDIKGDNVLVNT------YSGVVKISDFGTSKRLAGINP---CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCT  200 (268)
T ss_pred             eecCCCHHHEEEcC------CCCeEEEecchhheecccCCC---ccccCCCCccccChhhhccccccCCchhhhHHHHHH
Confidence            69999999999971      367899999999876543211   12334678899999997543 347899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||................+                    ..        ..+....++++.+++.+||..+
T Consensus       201 l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~--------~~~~~~~~~~~~~li~~~l~~~  252 (268)
T cd06624         201 IVEMATGKPPFIELGEPQAAMFKVGMFK--------------------IH--------PEIPESLSAEAKNFILRCFEPD  252 (268)
T ss_pred             HHHHHhCCCCCccccChhhhHhhhhhhc--------------------cC--------CCCCcccCHHHHHHHHHHcCCC
Confidence            9999999999865332111000000000                    00        0112346788999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|||+.+++.||||
T Consensus       253 p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         253 PDKRASAHDLLQDPFL  268 (268)
T ss_pred             chhCCCHHHHHhCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.89  E-value=7.8e-23  Score=173.97  Aligned_cols=134  Identities=25%  Similarity=0.477  Sum_probs=107.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........   ......|+..|+|||++.+ ..++.++|+||+||++
T Consensus       123 ~h~dl~p~ni~~~-------~~~~~kl~d~~~~~~~~~~~~---~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~  191 (256)
T cd08221         123 LHRDIKTLNIFLT-------KAGLIKLGDFGISKILGSEYS---MAETVVGTPYYMSPELCQG-VKYNFKSDIWALGCVL  191 (256)
T ss_pred             cccCCChHhEEEe-------CCCCEEECcCcceEEcccccc---cccccCCCccccCHhhcCC-CCCCCcchhHHHHHHH
Confidence            6999999999999       889999999999987644321   1345578999999999865 4488999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..+|.+.+..+....+..  +...+                            .....+.++.+++.+||..+|
T Consensus       192 ~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~----------------------------~~~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08221         192 YELLTLKRTFDATNPLNLVVKIVQ--GNYTP----------------------------VVSVYSSELISLVHSLLQQDP  241 (256)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHc--CCCCC----------------------------CccccCHHHHHHHHHHcccCc
Confidence            999999999988766555544432  11110                            013457889999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||++++++|+|+
T Consensus       242 ~~R~s~~~ll~~~~l  256 (256)
T cd08221         242 EKRPTADEVLDQPLL  256 (256)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.89  E-value=3e-23  Score=178.82  Aligned_cols=139  Identities=24%  Similarity=0.346  Sum_probs=104.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++........    .....++..|+|||++.+.. ++.++|+||+||+
T Consensus       116 i~H~di~p~Nil~~-------~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~i  183 (277)
T cd05577         116 IVYRDLKPENVLLD-------DHGNVRISDLGLAVELKGGKK----IKGRAGTPGYMAPEVLQGEV-YDFSVDWFALGCT  183 (277)
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEccCcchhhhccCCc----cccccCCCCcCCHHHhcCCC-CCchhhhHHHHHH
Confidence            46999999999999       889999999999986543211    23457788999999986544 8999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.........+....-                    ..       .....+..++.+.++|.+||+.|
T Consensus       184 l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~-------~~~~~~~~~~~~~~li~~~l~~~  236 (277)
T cd05577         184 LYEMIAGRSPFRQRKEKVEKEELKRRTL--------------------EM-------AVEYPDKFSPEAKDLCEALLQKD  236 (277)
T ss_pred             HHHHhhCCCCCCCCcccccHHHHHhccc--------------------cc-------cccCCccCCHHHHHHHHHHccCC
Confidence            9999999999976543211111111000                    00       00112345789999999999999


Q ss_pred             CCCCC-----CHHHHhcCCcccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~  182 (308)
                      |.+|+     ++.++++||||..
T Consensus       237 p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         237 PEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             hhHccCCCcccHHHHHhChhhhc
Confidence            99999     8999999999965

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.89  E-value=2.5e-23  Score=178.25  Aligned_cols=138  Identities=26%  Similarity=0.343  Sum_probs=100.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .||||||+||+++       .++.+||+|||++........   ......|+..|+|||.+.+  ...++.++|+||+||
T Consensus       128 ~H~dl~p~nill~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~  197 (267)
T cd06646         128 MHRDIKGANILLT-------DNGDVKLADFGVAAKITATIA---KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGI  197 (267)
T ss_pred             cccCCCHHHEEEC-------CCCCEEECcCccceeeccccc---ccCccccCccccCHhHcccccCCCCcchhhHHHHHH
Confidence            6999999999998       889999999999987643211   1234578899999998742  334788999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|+.||...........+......+                       +.  + .....++..+.+||++||..
T Consensus       198 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------~~--~-~~~~~~~~~~~~li~~~l~~  251 (267)
T cd06646         198 TAIELAELQPPMFDLHPMRALFLMSKSNFQP-----------------------PK--L-KDKTKWSSTFHNFVKISLTK  251 (267)
T ss_pred             HHHHHHhCCCCccccchhhhheeeecCCCCC-----------------------CC--C-ccccccCHHHHHHHHHHhhC
Confidence            9999999999986543222211111000000                       00  0 00124578999999999999


Q ss_pred             CCCCCCCHHHHhcCCc
Q psy7274         164 NPHKRIGVEDALAHPY  179 (308)
Q Consensus       164 dP~~R~t~~eil~hp~  179 (308)
                      +|++|||++++++|+|
T Consensus       252 ~P~~Rp~~~~il~~l~  267 (267)
T cd06646         252 NPKKRPTAERLLTHLF  267 (267)
T ss_pred             ChhhCcCHHHHhcCCC
Confidence            9999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.89  E-value=6.4e-23  Score=176.78  Aligned_cols=138  Identities=22%  Similarity=0.371  Sum_probs=106.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||+|+||+++       .++.++|+|||++.........   .....++..|+|||++.+ ..++.++|+||+||+
T Consensus       122 ivH~dl~p~Nil~~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~i  190 (277)
T cd06640         122 KIHRDIKAANVLLS-------EQGDVKLADFGVAGQLTDTQIK---RNTFVGTPFWMAPEVIQQ-SAYDSKADIWSLGIT  190 (277)
T ss_pred             ccCcCCChhhEEEc-------CCCCEEEcccccceeccCCccc---cccccCcccccCHhHhcc-CCCccHHHHHHHHHH
Confidence            36999999999999       8899999999999876433211   233468889999999864 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+.........+..  +.+                            .......+..+.+++.+||..+
T Consensus       191 l~el~tg~~p~~~~~~~~~~~~~~~--~~~----------------------------~~~~~~~~~~~~~li~~~l~~~  240 (277)
T cd06640         191 AIELAKGEPPNSDMHPMRVLFLIPK--NNP----------------------------PTLTGEFSKPFKEFIDACLNKD  240 (277)
T ss_pred             HHHHHHCCCCCCCcChHhHhhhhhc--CCC----------------------------CCCchhhhHHHHHHHHHHcccC
Confidence            9999999999977654433322210  000                            0111234678999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+||+++++++|+||...
T Consensus       241 p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         241 PSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             cccCcCHHHHHhChHhhhc
Confidence            9999999999999999653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.89  E-value=1.1e-22  Score=173.11  Aligned_cols=136  Identities=24%  Similarity=0.404  Sum_probs=104.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.+||+|||++.......    ......|+..|+|||.+.....++.++|+||+||+
T Consensus       123 i~H~dl~~~ni~~~-------~~~~~kl~d~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~  191 (258)
T cd06632         123 TVHRDIKGANILVD-------TNGVVKLADFGMAKQVVEFS----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCT  191 (258)
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEccCccceeccccc----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHH
Confidence            37999999999998       88999999999988754332    12345788999999998643338899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||...........+.....                             .....+.+++.+.+++.+||..+
T Consensus       192 l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~li~~~l~~~  242 (258)
T cd06632         192 VLEMATGKPPWSQLEGVAAVFKIGRSKE-----------------------------LPPIPDHLSDEAKDFILKCLQRD  242 (258)
T ss_pred             HHHHHhCCCCcccCcHHHHHHHHHhccc-----------------------------CCCcCCCcCHHHHHHHHHHhhcC
Confidence            9999999999976553333222211000                             01112346789999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+|||++++++|||+
T Consensus       243 p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         243 PSLRPTAAELLEHPFV  258 (258)
T ss_pred             cccCcCHHHHhcCCCC
Confidence            9999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.88  E-value=8.4e-23  Score=174.05  Aligned_cols=133  Identities=20%  Similarity=0.218  Sum_probs=100.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||.||+++       .++.+||+|||+++................++..|+|||.+.+ ..++.++|+||+||++
T Consensus       117 ~H~dlkp~nill~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  188 (257)
T cd05116         117 VHRDLAARNVLLV-------TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVLM  188 (257)
T ss_pred             eecccchhhEEEc-------CCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHHH
Confidence            6999999999999       8899999999999876443221111122344678999998754 4588999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+.+..+....+......                              ......++++.++|.+||+.|
T Consensus       189 ~el~t~g~~p~~~~~~~~~~~~i~~~~~~------------------------------~~~~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         189 WEAFSYGQKPYKGMKGNEVTQMIESGERM------------------------------ECPQRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHCCCCC------------------------------CCCCCCCHHHHHHHHHHhccC
Confidence            99998 99999887665555444321110                              011246789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++||++++|..
T Consensus       239 p~~Rp~~~~i~~  250 (257)
T cd05116         239 VDERPGFAVVEL  250 (257)
T ss_pred             chhCcCHHHHHH
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.88  E-value=4.8e-23  Score=175.12  Aligned_cols=134  Identities=24%  Similarity=0.407  Sum_probs=103.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++.      .++.+||+|||++........    ....+|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       123 ~h~dl~~~nil~~~------~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l  191 (256)
T cd08220         123 LHRDLKTQNILLDK------HKMVVKIGDFGISKILSSKSK----AYTVVGTPCYISPELCEG-KPYNQKSDIWALGCVL  191 (256)
T ss_pred             ecCCCCHHHEEEcC------CCCEEEEccCCCceecCCCcc----ccccccCCcccCchhccC-CCCCcccchHHHHHHH
Confidence            79999999999972      345689999999987653321    233578899999998764 5588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.+|.+.+.......+......                              ......+..+.+++.+||..+|
T Consensus       192 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~~p  241 (256)
T cd08220         192 YELASLKRAFEAANLPALVLKIMSGTFA------------------------------PISDRYSPDLRQLILSMLNLDP  241 (256)
T ss_pred             HHHHhCCCCcccCchHHHHHHHHhcCCC------------------------------CCCCCcCHHHHHHHHHHccCCh
Confidence            9999999999877654443333211000                              0112457889999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||++++++||||
T Consensus       242 ~~Rpt~~~ll~~p~~  256 (256)
T cd08220         242 SKRPQLSQIMAQPIC  256 (256)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.88  E-value=9e-23  Score=176.87  Aligned_cols=139  Identities=21%  Similarity=0.250  Sum_probs=103.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       140 i~H~dikp~nili~-------~~~~~~L~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~  210 (288)
T cd05061         140 FVHRDLAARNCMVA-------HDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVV  210 (288)
T ss_pred             CcCCCCChheEEEc-------CCCcEEECcCCccccccccccccc-cCCCcccccccCHHHhcc-CCCChHhHHHHHHHH
Confidence            37999999999999       889999999999986543221111 122345678999999864 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||++ |..||.+....+....+..... +                             ......++.+.+++.+||+.
T Consensus       211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~-~-----------------------------~~~~~~~~~~~~li~~~l~~  260 (288)
T cd05061         211 LWEITSLAEQPYQGLSNEQVLKFVMDGGY-L-----------------------------DQPDNCPERVTDLMRMCWQF  260 (288)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C-----------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            999998 7889987665554443321100 0                             00123468899999999999


Q ss_pred             CCCCCCCHHHHhc------CCcccc
Q psy7274         164 NPHKRIGVEDALA------HPYLEQ  182 (308)
Q Consensus       164 dP~~R~t~~eil~------hp~f~~  182 (308)
                      ||++|||+.++++      ||||..
T Consensus       261 ~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         261 NPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             ChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            9999999999886      899865

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.88  E-value=6.6e-23  Score=176.63  Aligned_cols=134  Identities=16%  Similarity=0.208  Sum_probs=100.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       +++.+||+|||+++.......... .....++..|+|||++.+ ..++.++|+||+||+
T Consensus       140 ~vH~dlkp~Nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~  210 (277)
T cd05062         140 FVHRDLAARNCMVA-------EDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVV  210 (277)
T ss_pred             cccCCcchheEEEc-------CCCCEEECCCCCccccCCcceeec-CCCCccCHhhcChhHhhc-CCcCchhHHHHHHHH
Confidence            37999999999999       889999999999986543211110 122355778999999865 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||++ |..||.+.+....+..+......                              ......+..+.+++.+||+.
T Consensus       211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~  260 (277)
T cd05062         211 LWEIATLAEQPYQGMSNEQVLRFVMEGGLL------------------------------DKPDNCPDMLFELMRMCWQY  260 (277)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCCcC------------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            999998 78899887665544443321100                              01123567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||++|||+.+++++
T Consensus       261 ~p~~Rps~~e~l~~  274 (277)
T cd05062         261 NPKMRPSFLEIISS  274 (277)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.88  E-value=8.3e-23  Score=178.86  Aligned_cols=136  Identities=23%  Similarity=0.380  Sum_probs=104.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG   82 (308)
                      -.||||||+||+++       .++.+||+|||++......       ....|+..|+|||.+.+  ...++.++||||+|
T Consensus       136 i~H~dl~p~nil~~-------~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG  201 (308)
T cd06634         136 MIHRDVKAGNILLS-------EPGLVKLGDFGSASIMAPA-------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  201 (308)
T ss_pred             cccCCCCHHhEEEC-------CCCcEEECCcccceeecCc-------ccccCCccccCHHHHhhcccCCCCcccchHHHH
Confidence            37999999999998       8899999999998765432       23478889999999752  23478899999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|..||.+.+..+....+..... +                     .       ......+..+.+||.+||.
T Consensus       202 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------~-------~~~~~~~~~~~~li~~cl~  252 (308)
T cd06634         202 ITCIELAERKPPLFNMNAMSALYHIAQNES-P---------------------A-------LQSGHWSEYFRNFVDSCLQ  252 (308)
T ss_pred             HHHHHHHcCCCCCccccHHHHHHHHhhcCC-C---------------------C-------cCcccccHHHHHHHHHHhh
Confidence            999999999999876554443333221100 0                     0       0012356789999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .+|.+||+++++++|+|+...
T Consensus       253 ~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         253 KIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             CCcccCCCHHHHhhCcccccc
Confidence            999999999999999999663

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.88  E-value=7.7e-23  Score=178.93  Aligned_cols=135  Identities=23%  Similarity=0.422  Sum_probs=104.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .||||+|+||+++       .++.+||+|||++......       ....++..|+|||++.+  ...++.++||||+||
T Consensus       137 ~H~dl~p~nIl~~-------~~~~~kL~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~  202 (307)
T cd06607         137 IHRDIKAGNILLT-------EPGTVKLADFGSASLVSPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI  202 (307)
T ss_pred             eecCCCcccEEEC-------CCCCEEEeecCcceecCCC-------CCccCCccccCceeeeccCCCCCCcccchHHHHH
Confidence            6999999999999       8899999999998765322       23478889999998742  345888999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|+.||.+.+.......+...  .++.                           ......+..+.++|.+||..
T Consensus       203 il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~---------------------------~~~~~~~~~~~~li~~~l~~  253 (307)
T cd06607         203 TCIELAERKPPLFNMNAMSALYHIAQN--DSPT---------------------------LSSNDWSDYFRNFVDSCLQK  253 (307)
T ss_pred             HHHHHHcCCCCCCCccHHHHHHHHhcC--CCCC---------------------------CCchhhCHHHHHHHHHHhcC
Confidence            999999999999877654443332210  0000                           00012467899999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      +|++||++.+++.||||...
T Consensus       254 ~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         254 IPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             ChhhCcCHHHHhcChhhccc
Confidence            99999999999999999753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.88  E-value=7.6e-23  Score=177.34  Aligned_cols=132  Identities=17%  Similarity=0.224  Sum_probs=100.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++........ .......++..|+|||++.+ ..++.++|+||+||+
T Consensus       141 i~H~dlkp~Nili~-------~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~i  211 (288)
T cd05093         141 FVHRDLATRNCLVG-------ENLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVV  211 (288)
T ss_pred             eeecccCcceEEEc-------cCCcEEeccCCccccccCCcee-ecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHH
Confidence            37999999999999       8999999999999865432211 11233456778999998864 568999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+....+.+..+......+                              .....+.++.+|+.+||+.
T Consensus       212 l~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~  261 (288)
T cd05093         212 LWEIFTYGKQPWYQLSNNEVIECITQGRVLQ------------------------------RPRTCPKEVYDLMLGCWQR  261 (288)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCcCC------------------------------CCCCCCHHHHHHHHHHccC
Confidence            999998 899998877655554443211000                              0123568899999999999


Q ss_pred             CCCCCCCHHHHh
Q psy7274         164 NPHKRIGVEDAL  175 (308)
Q Consensus       164 dP~~R~t~~eil  175 (308)
                      ||.+|||+++++
T Consensus       262 ~p~~Rpt~~~v~  273 (288)
T cd05093         262 EPHMRLNIKEIH  273 (288)
T ss_pred             ChhhCCCHHHHH
Confidence            999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.88  E-value=4.9e-23  Score=201.49  Aligned_cols=145  Identities=13%  Similarity=0.148  Sum_probs=97.0

Q ss_pred             CCCCCCCCCcccCccccc------------cCCCCCceEeccCCccccCCCCC-------------CCCCccCccccccc
Q psy7274           6 PHKRIGVEGALAHPYLEQ------------YYDPADEPICDFGLARVADPEHD-------------HTGFLTEYVATRWY   60 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~------------~~~~~~~ki~DFGla~~~~~~~~-------------~~~~~~~~~gt~~y   60 (308)
                      .||||||+||||+.....            .+.++.+||+|||+++.......             ........+||++|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            699999999999621110            12456788888888875321000             00001235789999


Q ss_pred             chhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCC
Q psy7274          61 RAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV  140 (308)
Q Consensus        61 ~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (308)
                      +|||++.+ ..|+.++||||+||++|||++|.+++....  ..+..+.... .| +..                      
T Consensus       182 ~APE~~~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~-~~~----------------------  234 (793)
T PLN00181        182 TSPEEDNG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LP-PQI----------------------  234 (793)
T ss_pred             EChhhhcc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cC-hhh----------------------
Confidence            99999875 458999999999999999999888764321  1111111100 00 000                      


Q ss_pred             CccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       141 ~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                            ....+.+.+++.+||..+|.+||++.|+++||||...
T Consensus       235 ------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        235 ------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             ------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence                  0113567789999999999999999999999999764

>KOG2345|consensus

Probab=99.88  E-value=7e-24  Score=170.32  Aligned_cols=139  Identities=24%  Similarity=0.279  Sum_probs=94.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC------CccCcccccccchhhHhhC--CCCCCchh
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG------FLTEYVATRWYRAPEIMLN--SKGYTKSI   76 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~------~~~~~~gt~~y~aPE~l~~--~~~~~~~~   76 (308)
                      -.||||||.|||++       +++.++|.|||.++...-......      ....--.|..|||||++.-  +...+.++
T Consensus       150 yAH~DiKP~NILls-------~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ert  222 (302)
T KOG2345|consen  150 YAHRDIKPANILLS-------DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERT  222 (302)
T ss_pred             ccccCCCcceeEec-------CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccccccc
Confidence            36999999999998       889999999999886532111100      0123356889999998742  23367899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHH
Q psy7274          77 DIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL  156 (308)
Q Consensus        77 DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  156 (308)
                      ||||+||++|+|+.|..||.-.         .+.-|.-.....                 .....+.. .+..|+.+.+|
T Consensus       223 DIWSLGCtLYa~mf~~sPfe~~---------~~~GgSlaLAv~-----------------n~q~s~P~-~~~yse~l~~l  275 (302)
T KOG2345|consen  223 DIWSLGCTLYAMMFGESPFERI---------YQQGGSLALAVQ-----------------NAQISIPN-SSRYSEALHQL  275 (302)
T ss_pred             chhhhhHHHHHHHHcCCcchHH---------hhcCCeEEEeee-----------------ccccccCC-CCCccHHHHHH
Confidence            9999999999999999999421         110010000000                 00000000 01268899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcC
Q psy7274         157 LGKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~h  177 (308)
                      ++.||+.||.+||++.+++.+
T Consensus       276 ik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  276 IKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             HHHHhcCCcccCCCHHHHHHH
Confidence            999999999999999998854

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.88  E-value=1.1e-22  Score=174.58  Aligned_cols=133  Identities=17%  Similarity=0.221  Sum_probs=99.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++||||+||++
T Consensus       134 ~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il  204 (272)
T cd05075         134 IHRDLAARNCMLN-------ENMNVCVADFGLSKKIYNGDYYRQ-GRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTM  204 (272)
T ss_pred             eccccchhheEEc-------CCCCEEECCCCcccccCcccceec-CCcccCCcccCCHHHccC-CCcChHHHHHHHHHHH
Confidence            6999999999998       889999999999987643321110 122345678999998764 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.........+......                              ...+..+..+.++|.+||+.|
T Consensus       205 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~  254 (272)
T cd05075         205 WEIATRGQTPYPGVENSEIYDYLRQGNRL------------------------------KQPPDCLDGLYSLMSSCWLLN  254 (272)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            99999 78999887655444333211000                              011245688999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||+++++++
T Consensus       255 p~~Rps~~~l~~~  267 (272)
T cd05075         255 PKDRPSFETLRCE  267 (272)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999998754

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.88  E-value=1.3e-22  Score=172.58  Aligned_cols=135  Identities=25%  Similarity=0.472  Sum_probs=103.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.|+||||+||+++       +++ .+||+|||.+.........   .....|+..|+|||++.+ ..++.++|+||+||
T Consensus       122 i~H~dl~~~nil~~-------~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~  190 (257)
T cd08225         122 ILHRDIKSQNIFLS-------KNGMVAKLGDFGIARQLNDSMEL---AYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGC  190 (257)
T ss_pred             cccccCCHHHEEEc-------CCCCeEEecccccchhccCCccc---ccccCCCccccCHHHHcC-CCCCchhhHHHHHH
Confidence            37999999999998       554 4699999999876533211   233468889999998754 45889999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|..||.+.+.......+....                              +....+..+.++.+++.+||..
T Consensus       191 il~~l~~g~~p~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~i~~~l~~  240 (257)
T cd08225         191 VLYELCTLKHPFEGNNLHQLVLKICQGY------------------------------FAPISPNFSRDLRSLISQLFKV  240 (257)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHhccc------------------------------CCCCCCCCCHHHHHHHHHHhcc
Confidence            9999999999998766444333222100                              0111234678899999999999


Q ss_pred             CCCCCCCHHHHhcCCcc
Q psy7274         164 NPHKRIGVEDALAHPYL  180 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f  180 (308)
                      +|++|||+.++++||||
T Consensus       241 ~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         241 SPRDRPSITSILKRPFL  257 (257)
T ss_pred             ChhhCcCHHHHhhCCCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.88  E-value=1.4e-22  Score=173.07  Aligned_cols=142  Identities=26%  Similarity=0.439  Sum_probs=103.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCC-ccCcccccccchhhHhhCCC--CCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGF-LTEYVATRWYRAPEIMLNSK--GYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~--~~~~~~DiWSl   81 (308)
                      -.||||||+||+++       .++.+||+|||++............ .....++..|+|||++.+..  .++.++||||+
T Consensus       120 i~H~dl~~~nil~~-------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~  192 (264)
T cd06626         120 IVHRDIKPANIFLD-------HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSL  192 (264)
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHH
Confidence            37999999999999       8899999999999876543222111 22356788999999986432  27889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||+++++++|+.||.+............. +..                       +..+   ....++..+.+++.+||
T Consensus       193 G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~-----------------------~~~~---~~~~~~~~~~~li~~~l  245 (264)
T cd06626         193 GCVVLEMATGKRPWSELDNEFQIMFHVGA-GHK-----------------------PPIP---DSLQLSPEGKDFLDRCL  245 (264)
T ss_pred             HHHHHHHHhCCCCccCCcchHHHHHHHhc-CCC-----------------------CCCC---cccccCHHHHHHHHHHc
Confidence            99999999999999765422222111111 100                       0000   01234788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcc
Q psy7274         162 TFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f  180 (308)
                      +.+|.+|||+++++.|||+
T Consensus       246 ~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         246 ESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             cCCcccCCCHHHHhcCCCC
Confidence            9999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.88  E-value=4.7e-23  Score=182.01  Aligned_cols=171  Identities=17%  Similarity=0.154  Sum_probs=105.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC----CccCcccccccchhhHhhCC-CCCCchhhHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG----FLTEYVATRWYRAPEIMLNS-KGYTKSIDIW   79 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~----~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiW   79 (308)
                      -.||||||+|||++       .++.+|++|||.+...........    ......++..|+|||++.+. ..++.++|||
T Consensus       122 ivHrDlkp~Nill~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diw  194 (328)
T cd08226         122 YIHRNIKASHILIS-------GDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIY  194 (328)
T ss_pred             eecCCCCHHHEEEe-------CCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHH
Confidence            36999999999998       889999999986553322111000    01112345679999998653 3478999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhh--H----hhhhhHHHHHHhhcCCC---C----CCC---Ccc
Q psy7274          80 SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPED--L----SCIINEKARSYLQSLPF---K----PKV---PWE  143 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~--~----~~~~~~~~~~~~~~~~~---~----~~~---~~~  143 (308)
                      |+||++++|++|+.||.+......+..+.......+...  .    ....... ..+......   .    ...   .+.
T Consensus       195 slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (328)
T cd08226         195 SVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ-SGVDSGIGESVVAAGMTQTMTSERLR  273 (328)
T ss_pred             HHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccch-hhhhcccccchhcccccccccccccc
Confidence            999999999999999988765544433332111111000  0    0000000 000000000   0    000   000


Q ss_pred             -ccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         144 -ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       144 -~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                       ......+..+.+||++||+.||.+|||+.++++||||+..
T Consensus       274 ~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         274 TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence             0012356789999999999999999999999999999765

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.88  E-value=8.4e-23  Score=174.90  Aligned_cols=142  Identities=24%  Similarity=0.418  Sum_probs=103.7

Q ss_pred             CCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .||||||+||+++       .++ .+||+|||++.......... .......||..|+|||++.+ ..++.++|+||+||
T Consensus       125 ~H~~i~~~nil~~-------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~  196 (268)
T cd06630         125 IHRDVKGANLLID-------STGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGC  196 (268)
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEEcccccccccccccccCCccccccccccceeCHhHhcc-CCCCcccchHHHHH
Confidence            6999999999998       554 59999999998765432111 11223468889999999864 55899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|..||...........+.......                          .........++++.+++.+||..
T Consensus       197 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~i~~~l~~  250 (268)
T cd06630         197 VIIEMATAKPPWNAEKHSNHLALIFKIASAT--------------------------TAPSIPEHLSPGLRDVTLRCLEL  250 (268)
T ss_pred             HHHHHHhCCCCCCCCCCcchHHHHHHHhccC--------------------------CCCCCchhhCHHHHHHHHHHcCC
Confidence            9999999999996554332222222110000                          00011224578999999999999


Q ss_pred             CCCCCCCHHHHhcCCccc
Q psy7274         164 NPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~  181 (308)
                      +|++|||+.++++||||+
T Consensus       251 ~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         251 QPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             CcccCcCHHHHhcCcccC
Confidence            999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.88  E-value=1.2e-22  Score=171.78  Aligned_cols=135  Identities=27%  Similarity=0.407  Sum_probs=103.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||+|+||+++       .++.++|+|||.+........    .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       119 i~h~dl~p~ni~i~-------~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~i  186 (253)
T cd05122         119 IIHRDIKAANILLT-------SDGEVKLIDFGLSAQLSDTKA----RNTMVGTPYWMAPEVING-KPYDYKADIWSLGIT  186 (253)
T ss_pred             EecCCCCHHHEEEc-------cCCeEEEeecccccccccccc----ccceecCCcccCHHHHcC-CCCCccccHHHHHHH
Confidence            37999999999999       889999999999987654321    234578889999999865 448899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||...+....+..+... ..+                        ..+.   ....+..+.++|.+||+.|
T Consensus       187 l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~------------------------~~~~---~~~~~~~~~~~i~~~l~~~  238 (253)
T cd05122         187 AIELAEGKPPYSELPPMKALFKIATN-GPP------------------------GLRN---PEKWSDEFKDFLKKCLQKN  238 (253)
T ss_pred             HHHHHhCCCCCCCCchHHHHHHHHhc-CCC------------------------CcCc---ccccCHHHHHHHHHHccCC
Confidence            99999999999876544443332210 000                        0000   0113688999999999999


Q ss_pred             CCCCCCHHHHhcCCc
Q psy7274         165 PHKRIGVEDALAHPY  179 (308)
Q Consensus       165 P~~R~t~~eil~hp~  179 (308)
                      |++|||+.++++|||
T Consensus       239 p~~R~t~~~~l~~~~  253 (253)
T cd05122         239 PEKRPTAEQLLKHPF  253 (253)
T ss_pred             hhhCCCHHHHhcCCC
Confidence            999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.88  E-value=8.3e-23  Score=164.12  Aligned_cols=134  Identities=20%  Similarity=0.258  Sum_probs=96.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|..-||+|||++       .++.+|+  ||+++.....        ...||..|+|||++.+ ..++.++||||+||++
T Consensus        33 lH~~~kp~Nil~~-------~~~~~~~--fG~~~~~~~~--------~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il   94 (176)
T smart00750       33 LHRQAKSGNILLT-------WDGLLKL--DGSVAFKTPE--------QSRVDPYFMAPEVIQG-QSYTEKADIYSLGITL   94 (176)
T ss_pred             HHhcCCcccEeEc-------Cccceee--ccceEeeccc--------cCCCcccccChHHhcC-CCCcchhhHHHHHHHH
Confidence            4555599999998       8899999  9999875432        1268999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHH-HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCCh--hHHHHHHHhcc
Q psy7274          86 AEMISNRPIFPGKHYLD-QLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP--NALDLLGKMLT  162 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~ll~~~L~  162 (308)
                      |||++|+.||....... .+..+........+..                   ...     ....+.  .+.+++.+||.
T Consensus        95 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~-----~~~~~~~~~~~~~i~~cl~  150 (176)
T smart00750       95 YEALDYELPYNEERELSAILEILLNGMPADDPRD-------------------RSN-----LESVSAARSFADFMRVCAS  150 (176)
T ss_pred             HHHHhCCCCccccchhcHHHHHHHHHhccCCccc-------------------ccc-----HHHHHhhhhHHHHHHHHHh
Confidence            99999999996654322 2222221111000000                   000     001122  68999999999


Q ss_pred             cCCCCCCCHHHHhcCCccc
Q psy7274         163 FNPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~  181 (308)
                      .+|.+|||+.++++|+|+.
T Consensus       151 ~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      151 RLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             cccccccCHHHHHHHHHHH
Confidence            9999999999999999984

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.88  E-value=1.8e-22  Score=176.29  Aligned_cols=138  Identities=15%  Similarity=0.188  Sum_probs=98.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......++..|+|||++.+ ..++.++||||+||++
T Consensus       160 vH~dlkp~Nill~-------~~~~~kl~DfG~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l  230 (304)
T cd05096         160 VHRDLATRNCLVG-------ENLTIKIADFGMSRNLYAGDYY-RIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTL  230 (304)
T ss_pred             cccCcchhheEEc-------CCccEEECCCccceecccCcee-EecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHH
Confidence            6999999999999       8899999999999865432211 11233456788999999865 4589999999999999


Q ss_pred             HHHhh--CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMIS--NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~--g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|++  +..||.+.+..+.+..+........                       ........+..+..+.+|+.+||..
T Consensus       231 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~li~~cl~~  287 (304)
T cd05096         231 WEILMLCKEQPYGELTDEQVIENAGEFFRDQG-----------------------RQVYLFRPPPCPQGLYELMLQCWSR  287 (304)
T ss_pred             HHHHHccCCCCCCcCCHHHHHHHHHHHhhhcc-----------------------ccccccCCCCCCHHHHHHHHHHccC
Confidence            99987  4567776655444433322110000                       0000011234578899999999999


Q ss_pred             CCCCCCCHHHHh
Q psy7274         164 NPHKRIGVEDAL  175 (308)
Q Consensus       164 dP~~R~t~~eil  175 (308)
                      ||.+|||++++.
T Consensus       288 ~p~~RPs~~~i~  299 (304)
T cd05096         288 DCRERPSFSDIH  299 (304)
T ss_pred             CchhCcCHHHHH
Confidence            999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.88  E-value=6.5e-23  Score=184.18  Aligned_cols=133  Identities=22%  Similarity=0.303  Sum_probs=97.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......... ......++..|+|||++.+ ..++.++||||+||++
T Consensus       234 iHrDLkp~Nil~~-------~~~~~kL~DfGla~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlGvil  304 (374)
T cd05106         234 IHRDVAARNVLLT-------DGRVAKICDFGLARDIMNDSNYV-VKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILL  304 (374)
T ss_pred             EeccCchheEEEe-------CCCeEEEeeceeeeeccCCccee-eccCCCCccceeCHHHhcC-CCCCccccHHHHHHHH
Confidence            6999999999998       88999999999998654332111 1122345667999999865 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++ |+.||.+......+..+......+                        .     .....++++.+++.+||+.|
T Consensus       305 ~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~------------------------~-----~~~~~~~~l~~li~~cl~~d  355 (374)
T cd05106         305 WEIFSLGKSPYPGILVNSKFYKMVKRGYQM------------------------S-----RPDFAPPEIYSIMKMCWNLE  355 (374)
T ss_pred             HHHHhCCCCCCccccccHHHHHHHHcccCc------------------------c-----CCCCCCHHHHHHHHHHcCCC
Confidence            99997 999997754333222222110000                        0     01134789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       356 p~~RPs~~~l~~  367 (374)
T cd05106         356 PTERPTFSQISQ  367 (374)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.88  E-value=2e-22  Score=176.85  Aligned_cols=135  Identities=24%  Similarity=0.415  Sum_probs=105.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG   82 (308)
                      -.||||||+||+++       .++.+||+|||++.....       .....|+..|+|||++..  ...++.++|+||+|
T Consensus       142 i~H~dl~p~nili~-------~~~~~kL~dfg~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slG  207 (313)
T cd06633         142 MIHRDIKAGNILLT-------EPGQVKLADFGSASKSSP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  207 (313)
T ss_pred             eecCCCChhhEEEC-------CCCCEEEeecCCCcccCC-------CCCccccccccChhhccccCCCCCCchhhHHHHH
Confidence            36999999999998       889999999999864321       234578899999999742  24478899999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|..||.+.+....+..+.... .+                     .       ......+..+.+|+.+||+
T Consensus       208 vil~el~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------~-------~~~~~~~~~l~~li~~~l~  258 (313)
T cd06633         208 ITCIELAERKPPLFNMNAMSALYHIAQND-SP---------------------T-------LQSNEWTDSFRGFVDYCLQ  258 (313)
T ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHhcC-CC---------------------C-------CCccccCHHHHHHHHHHcc
Confidence            99999999999998776555544432110 00                     0       0012345779999999999


Q ss_pred             cCCCCCCCHHHHhcCCcccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~  182 (308)
                      .+|.+||++.++++||||+.
T Consensus       259 ~~P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         259 KIPQERPASAELLRHDFVRR  278 (313)
T ss_pred             CChhhCcCHHHHhcCcccCC
Confidence            99999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.88  E-value=1.3e-22  Score=175.45  Aligned_cols=147  Identities=22%  Similarity=0.327  Sum_probs=103.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.++|+|||++.......     ....+||..|+|||++.+ ..++.++|+||+||+
T Consensus       125 i~H~dl~p~nil~~-------~~~~~~l~d~gl~~~~~~~~-----~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~  191 (284)
T cd06620         125 IMHRDIKPSNILVN-------SRGQIKLCDFGVSGELINSI-----ADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGIS  191 (284)
T ss_pred             eeccCCCHHHEEEC-------CCCcEEEccCCcccchhhhc-----cCccccCcccCCHHHHcc-CCCCccchHHHHHHH
Confidence            37999999999998       88999999999987653221     123578999999999865 458899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++++++|+.||..........        ..+..+....    .......  .+..+    ....+..+.+|+.+||+.|
T Consensus       192 l~~l~tg~~p~~~~~~~~~~~--------~~~~~~~~~~----~~~~~~~--~~~~~----~~~~~~~~~~li~~~l~~d  253 (284)
T cd06620         192 IIELALGKFPFAFSNIDDDGQ--------DDPMGILDLL----QQIVQEP--PPRLP----SSDFPEDLRDFVDACLLKD  253 (284)
T ss_pred             HHHHHhCCCCCcccchhhhhh--------hhhhHHHHHH----HHHhhcc--CCCCC----chhcCHHHHHHHHHHhcCC
Confidence            999999999997654321100        0000000000    0000000  00000    0125678999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||++|+++|+||..
T Consensus       254 p~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         254 PTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             cccCcCHHHHhcCccccc
Confidence            999999999999999965

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.88  E-value=8.7e-23  Score=174.28  Aligned_cols=138  Identities=26%  Similarity=0.452  Sum_probs=106.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||+|+||+++       .++.++|+|||++.........   .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       121 ~~H~~l~~~ni~~~-------~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~i  189 (264)
T cd06623         121 IIHRDIKPSNLLIN-------SKGEVKIADFGISKVLENTLDQ---CNTFVGTVTYMSPERIQG-ESYSYAADIWSLGLT  189 (264)
T ss_pred             CccCCCCHHHEEEC-------CCCCEEEccCccceecccCCCc---ccceeecccccCHhhhCC-CCCCchhhHHHHHHH
Confidence            37999999999999       8999999999999876543221   234578889999999765 468999999999999


Q ss_pred             HHHHhhCCCCCCCCCH---HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCC-CChhHHHHHHHh
Q psy7274          85 LAEMISNRPIFPGKHY---LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN-ADPNALDLLGKM  160 (308)
Q Consensus        85 l~ell~g~~pf~~~~~---~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~ll~~~  160 (308)
                      +++|++|..||.+...   .+....+.   ....+                           ..... .+..+.++|.+|
T Consensus       190 l~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~~~---------------------------~~~~~~~~~~l~~li~~~  239 (264)
T cd06623         190 LLECALGKFPFLPPGQPSFFELMQAIC---DGPPP---------------------------SLPAEEFSPEFRDFISAC  239 (264)
T ss_pred             HHHHHhCCCCCccccccCHHHHHHHHh---cCCCC---------------------------CCCcccCCHHHHHHHHHH
Confidence            9999999999977642   22222221   11000                           01122 578899999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |..+|++|||++++++||||+..
T Consensus       240 l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         240 LQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             ccCChhhCCCHHHHHhCHHHHhc
Confidence            99999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.88  E-value=5.5e-23  Score=177.14  Aligned_cols=138  Identities=22%  Similarity=0.355  Sum_probs=104.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.+||+|||++.........   .....|+..|+|||.+.+ ..++.++|+||+||+
T Consensus       122 ivH~dl~p~ni~i~-------~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i  190 (277)
T cd06642         122 KIHRDIKAANVLLS-------EQGDVKLADFGVAGQLTDTQIK---RNTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGIT  190 (277)
T ss_pred             eeccCCChheEEEe-------CCCCEEEccccccccccCcchh---hhcccCcccccCHHHhCc-CCCchhhhHHHHHHH
Confidence            36999999999998       8899999999999866432211   123468889999999864 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||++|+.||...........+..  +                     .  .     .......+..+.+++.+||..+
T Consensus       191 l~el~tg~~p~~~~~~~~~~~~~~~--~---------------------~--~-----~~~~~~~~~~~~~li~~~l~~~  240 (277)
T cd06642         191 AIELAKGEPPNSDLHPMRVLFLIPK--N---------------------S--P-----PTLEGQYSKPFKEFVEACLNKD  240 (277)
T ss_pred             HHHHHhCCCCCcccchhhHHhhhhc--C---------------------C--C-----CCCCcccCHHHHHHHHHHccCC
Confidence            9999999999865443222211100  0                     0  0     0011235678999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||+.++++||||..+
T Consensus       241 p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         241 PRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             cccCcCHHHHHHhHHHHHH
Confidence            9999999999999999764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.88  E-value=1.5e-22  Score=172.79  Aligned_cols=142  Identities=30%  Similarity=0.536  Sum_probs=107.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-----CCCccCcccccccchhhHhhCCCCCCchhhHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW   79 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiW   79 (308)
                      -.||||+|+||+++       .++.+||+|||++.........     .......+++..|+|||.+.+. .++.++|+|
T Consensus       114 i~H~di~~~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Dv~  185 (265)
T cd05579         114 IIHRDLKPDNILID-------SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ-GHSKTVDWW  185 (265)
T ss_pred             eecCCCCHHHeEEc-------CCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCC-CCCcchhhH
Confidence            36999999999999       8899999999998865432110     0012345688899999998654 488999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          80 SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |+||+++++++|..||......+....+..  +...                          +.. ....+..+.+++.+
T Consensus       186 slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~--------------------------~~~-~~~~~~~~~~~i~~  236 (265)
T cd05579         186 SLGCILYEFLVGIPPFHGETPEEIFQNILN--GKIE--------------------------WPE-DVEVSDEAIDLISK  236 (265)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCcC--------------------------CCc-cccCCHHHHHHHHH
Confidence            999999999999999987765554444322  0000                          000 00137889999999


Q ss_pred             hcccCCCCCCCH---HHHhcCCccccc
Q psy7274         160 MLTFNPHKRIGV---EDALAHPYLEQY  183 (308)
Q Consensus       160 ~L~~dP~~R~t~---~eil~hp~f~~~  183 (308)
                      ||+.+|++|||+   .++++||||+.+
T Consensus       237 ~l~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         237 LLVPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             HhcCCHhhcCCCccHHHHhcCccccCC
Confidence            999999999999   999999999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.88  E-value=2e-22  Score=172.34  Aligned_cols=131  Identities=17%  Similarity=0.281  Sum_probs=99.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.........  .....++..|+|||.+.+ ..++.++||||+||++
T Consensus       126 ~H~dlkp~nil~~-------~~~~~kl~df~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il  195 (263)
T cd05052         126 IHRDLAARNCLVG-------ENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLL  195 (263)
T ss_pred             eecccCcceEEEc-------CCCcEEeCCCccccccccceeec--cCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHH
Confidence            6999999999998       88999999999998764322111  112234567999998754 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||++.+..+....+......                              ......+.++.+++.+||..|
T Consensus       196 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~~  245 (263)
T cd05052         196 WEIATYGMSPYPGIDLSQVYELLEKGYRM------------------------------ERPEGCPPKVYELMRACWQWN  245 (263)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHCCCCC------------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            99998 99999887765544443221100                              011345789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       246 p~~Rp~~~~l~~  257 (263)
T cd05052         246 PSDRPSFAEIHQ  257 (263)
T ss_pred             cccCCCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.88  E-value=1.9e-22  Score=173.67  Aligned_cols=137  Identities=33%  Similarity=0.599  Sum_probs=106.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-----------------CCCccCcccccccchhhHhh
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-----------------TGFLTEYVATRWYRAPEIML   67 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-----------------~~~~~~~~gt~~y~aPE~l~   67 (308)
                      -.|+||||+||+++       .++.++|+|||++.........                 ........|+..|+|||++.
T Consensus       123 ~~H~dl~~~ni~i~-------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  195 (280)
T cd05581         123 IIHRDLKPENILLD-------KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN  195 (280)
T ss_pred             eeecCCCHHHeEEC-------CCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC
Confidence            36999999999998       8899999999999866432210                 01123446788999999876


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCC
Q psy7274          68 NSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP  147 (308)
Q Consensus        68 ~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (308)
                      + ..++.++|+||+||+++++++|+.||...+....+..+.....                               ....
T Consensus       196 ~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~~  243 (280)
T cd05581         196 E-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY-------------------------------SFPP  243 (280)
T ss_pred             C-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC-------------------------------CCCC
Confidence            4 4588999999999999999999999987765444433321100                               0112


Q ss_pred             CCChhHHHHHHHhcccCCCCCCCH----HHHhcCCcc
Q psy7274         148 NADPNALDLLGKMLTFNPHKRIGV----EDALAHPYL  180 (308)
Q Consensus       148 ~~s~~~~~ll~~~L~~dP~~R~t~----~eil~hp~f  180 (308)
                      ..++.+.+||.+||..+|.+|||+    +++++||||
T Consensus       244 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         244 NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            357889999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.88  E-value=1.9e-22  Score=173.89  Aligned_cols=136  Identities=19%  Similarity=0.216  Sum_probs=98.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++..    +....+||+|||+++........ .......++..|+|||++.+ ..++.++||||+||++
T Consensus       138 vH~dlkp~nil~~~~----~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il  211 (277)
T cd05036         138 IHRDIAARNCLLTCK----GPGRVAKIADFGMARDIYRASYY-RKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLL  211 (277)
T ss_pred             eecccchheEEEecc----CCCcceEeccCccccccCCccce-ecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHH
Confidence            799999999999710    11236899999999876322111 10122234567999999865 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.+..+....+..... +                             .....++..+.+++.+||+.+
T Consensus       212 ~el~~~g~~pf~~~~~~~~~~~~~~~~~-~-----------------------------~~~~~~~~~~~~~i~~cl~~~  261 (277)
T cd05036         212 WEIFSLGYMPYPGRTNQEVMEFVTGGGR-L-----------------------------DPPKGCPGPVYRIMTDCWQHT  261 (277)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCc-C-----------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            99996 9999988776554443321100 0                             011245788999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||+.++++|
T Consensus       262 p~~Rps~~~vl~~  274 (277)
T cd05036         262 PEDRPNFATILER  274 (277)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999876

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0695|consensus

Probab=99.88  E-value=1.6e-22  Score=169.24  Aligned_cols=135  Identities=23%  Similarity=0.399  Sum_probs=103.9

Q ss_pred             CCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHH
Q psy7274           7 HKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA   86 (308)
Q Consensus         7 HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~   86 (308)
                      -||||.+|+|+|       ..|++||+|+|+++..-.+.+   ..+++|||+.|.|||++.+ ..|+..+|+|++|++++
T Consensus       374 yrdlkldnvlld-------aeghikltdygmcke~l~~gd---~tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmf  442 (593)
T KOG0695|consen  374 YRDLKLDNVLLD-------AEGHIKLTDYGMCKEGLGPGD---TTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMF  442 (593)
T ss_pred             eeeccccceEEc-------cCCceeecccchhhcCCCCCc---ccccccCCCcccchhhhcc-cccCceehHHHHHHHHH
Confidence            589999999999       999999999999986543332   2577899999999999875 56999999999999999


Q ss_pred             HHhhCCCCCCC-------CCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          87 EMISNRPIFPG-------KHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        87 ell~g~~pf~~-------~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      ||+.|+.||.-       .+..+.+..++-               .+          .-     .+...+|-.+..+|++
T Consensus       443 emmagrspfdivgm~n~d~ntedylfqvil---------------ek----------qi-----riprslsvkas~vlkg  492 (593)
T KOG0695|consen  443 EMMAGRSPFDIVGMDNPDMNTEDYLFQVIL---------------EK----------QI-----RIPRSLSVKASHVLKG  492 (593)
T ss_pred             HHHcCCCCcceecCCCcccchhHHHHHHHh---------------hh----------cc-----cccceeehhhHHHHHH
Confidence            99999999942       122222222210               00          00     1122457778899999


Q ss_pred             hcccCCCCCCC------HHHHhcCCcccc
Q psy7274         160 MLTFNPHKRIG------VEDALAHPYLEQ  182 (308)
Q Consensus       160 ~L~~dP~~R~t------~~eil~hp~f~~  182 (308)
                      .|..||.+|+.      ..++..|+||+.
T Consensus       493 flnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  493 FLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             hhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            99999999986      578999999975

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.88  E-value=1.7e-22  Score=177.48  Aligned_cols=133  Identities=18%  Similarity=0.255  Sum_probs=99.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||++.+ ..++.++||||+||++
T Consensus       131 iH~dlkp~Nill~-------~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l  201 (316)
T cd05108         131 VHRDLAARNVLVK-------TPQHVKITDFGLAKLLGADEKEYH-AEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTV  201 (316)
T ss_pred             eccccchhheEec-------CCCcEEEccccccccccCCCccee-ccCCccceeecChHHhcc-CCCCchhhhHHHHHHH
Confidence            6999999999998       889999999999987654322111 122344678999999864 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |..||.+....+....+......+                              ..+..+..+.+++.+||..+
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~cl~~~  251 (316)
T cd05108         202 WELMTFGSKPYDGIPASEISSILEKGERLP------------------------------QPPICTIDVYMIMVKCWMID  251 (316)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHhCCCCCC------------------------------CCCCCCHHHHHHHHHHccCC
Confidence            99997 999998765443322211100000                              01235678999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.+++.+
T Consensus       252 p~~Rps~~~l~~~  264 (316)
T cd05108         252 ADSRPKFRELIIE  264 (316)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.7e-22  Score=173.38  Aligned_cols=133  Identities=14%  Similarity=0.159  Sum_probs=99.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       +++.+||+|||+++.......... .....++..|+|||++. ...++.++||||+||++
T Consensus       135 ~H~dlkp~Nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~SlG~il  205 (273)
T cd05035         135 IHRDLAARNCMLR-------EDMTVCVADFGLSKKIYSGDYYRQ-GRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTM  205 (273)
T ss_pred             eccccchheEEEC-------CCCeEEECCccceeeccccccccc-cccccCCccccCHhhcc-cCCCCcccchHHHHHHH
Confidence            6999999999998       889999999999987643321110 11223466899999875 45689999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+....+.+..+.....                         .     ......+..+.+++.+||..|
T Consensus       206 ~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~-----~~~~~~~~~~~~li~~~l~~~  255 (273)
T cd05035         206 WEIATRGQTPYPGVENHEIYDYLRHGNR-------------------------L-----KQPEDCLDELYDLMYSCWRAD  255 (273)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCC-------------------------C-----CCCcCCCHHHHHHHHHHcCCC
Confidence            99999 8899988765554443322100                         0     011245789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.+++++
T Consensus       256 p~~Rp~~~e~~~~  268 (273)
T cd05035         256 PKDRPTFTKLREV  268 (273)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG1989|consensus

Probab=99.88  E-value=2.8e-23  Score=192.90  Aligned_cols=132  Identities=27%  Similarity=0.433  Sum_probs=97.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC-CCC--Cc---cCcccccccchhhHhh--CCCCCCchhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD-HTG--FL---TEYVATRWYRAPEIML--NSKGYTKSID   77 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~-~~~--~~---~~~~gt~~y~aPE~l~--~~~~~~~~~D   77 (308)
                      .|||||-|||||+       .+|+.||||||.|........ ..+  .+   -....|+.|||||++-  .+...+.++|
T Consensus       168 IHRDLKiENvLls-------~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsD  240 (738)
T KOG1989|consen  168 IHRDLKIENVLLS-------ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSD  240 (738)
T ss_pred             chhhhhhhheEEc-------CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhH
Confidence            6999999999999       999999999999985433221 000  00   0124588999999973  3456899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          78 IWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        78 iWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      ||+|||+||.|+....||.+.....++..-   ...|+                              ++..+..+++||
T Consensus       241 IWALGclLYkLCy~t~PFe~sg~laIlng~---Y~~P~------------------------------~p~ys~~l~~LI  287 (738)
T KOG1989|consen  241 IWALGCLLYKLCYFTTPFEESGKLAILNGN---YSFPP------------------------------FPNYSDRLKDLI  287 (738)
T ss_pred             HHHHHHHHHHHHHhCCCcCcCcceeEEecc---ccCCC------------------------------CccHHHHHHHHH
Confidence            999999999999999999776432221110   00010                              145678999999


Q ss_pred             HHhcccCCCCCCCHHHHhcC
Q psy7274         158 GKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~h  177 (308)
                      +.||+.||.+||++-+++.+
T Consensus       288 ~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  288 RTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             HHHhccCcccCCCHHHHHHH
Confidence            99999999999999887743

>KOG1027|consensus

Probab=99.88  E-value=2.7e-23  Score=191.33  Aligned_cols=144  Identities=26%  Similarity=0.352  Sum_probs=105.1

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      --.||||||+||||+-  .......+++|+|||+|+.+..+...-...++..||-+|+|||++.+.. -+.++||+|+||
T Consensus       626 ~iVHRDLkPQNILI~~--~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGC  702 (903)
T KOG1027|consen  626 KIVHRDLKPQNILISV--PSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGC  702 (903)
T ss_pred             ccccccCCCceEEEEc--cCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCc
Confidence            4479999999999971  1112346789999999999877654444467788999999999987544 677999999999


Q ss_pred             HHHHHhhC-CCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISN-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g-~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++|..++| ..||. +....+.+.+.   |....                          ..+.+....++.+||.+|+.
T Consensus       703 vfyYvltgG~HpFG-d~~~R~~NIl~---~~~~L--------------------------~~L~~~~d~eA~dLI~~ml~  752 (903)
T KOG1027|consen  703 VFYYVLTGGSHPFG-DSLERQANILT---GNYTL--------------------------VHLEPLPDCEAKDLISRMLN  752 (903)
T ss_pred             eEEEEecCCccCCC-chHHhhhhhhc---Cccce--------------------------eeeccCchHHHHHHHHHhcC
Confidence            99998886 78884 33222222111   11100                          11111122389999999999


Q ss_pred             cCCCCCCCHHHHhcCCcc
Q psy7274         163 FNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f  180 (308)
                      .+|..||+|.++|.||+|
T Consensus       753 ~dP~~RPsa~~VL~HPlF  770 (903)
T KOG1027|consen  753 PDPQLRPSATDVLNHPLF  770 (903)
T ss_pred             CCcccCCCHHHHhCCCcc
Confidence            999999999999999999

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.88  E-value=7.3e-23  Score=172.46  Aligned_cols=127  Identities=23%  Similarity=0.326  Sum_probs=97.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.++++|||.+......      .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       106 i~H~dlkp~Nil~~-------~~~~~~l~df~~~~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~i  171 (237)
T cd05576         106 IVCRDLNPNNILLD-------DRGHIQLTYFSRWSEVEDS------CDGEAVENMYCAPEVGGI-SEETEACDWWSLGAI  171 (237)
T ss_pred             eeccCCCHHHEEEc-------CCCCEEEecccchhccccc------cccCCcCccccCCcccCC-CCCCchhhHHHHHHH
Confidence            37999999999999       8899999999988765432      223456778999998743 558899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.++......     +            .               ....   ..+.+.++..+.++|.+||+.|
T Consensus       172 l~el~~g~~~~~~~~~~-----~------------~---------------~~~~---~~~~~~~~~~~~~li~~~l~~d  216 (237)
T cd05576         172 LFELLTGKTLVECHPSG-----I------------N---------------THTT---LNIPEWVSEEARSLLQQLLQFN  216 (237)
T ss_pred             HHHHHHCcchhhcCchh-----c------------c---------------cccc---cCCcccCCHHHHHHHHHHccCC
Confidence            99999999876432110     0            0               0000   0112346789999999999999


Q ss_pred             CCCCCCH-----HHHhcCCcc
Q psy7274         165 PHKRIGV-----EDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~-----~eil~hp~f  180 (308)
                      |++|+|+     +++++||||
T Consensus       217 p~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         217 PTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHhcCCCccchHHHHcCCCC
Confidence            9999986     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.8e-22  Score=171.54  Aligned_cols=137  Identities=22%  Similarity=0.431  Sum_probs=104.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++................|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       128 ~H~dl~p~ni~i~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  199 (264)
T cd06653         128 VHRDIKGANILRD-------SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTV  199 (264)
T ss_pred             ecCCCCHHHEEEc-------CCCCEEECccccccccccccccCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHH
Confidence            7999999999998       8899999999999865432111111244678999999998865 4588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +++++|+.||.+.........+   ...+..                          ..+...++..+.++|.+||+ +|
T Consensus       200 ~~l~~g~~p~~~~~~~~~~~~~---~~~~~~--------------------------~~~p~~~~~~~~~~i~~~l~-~~  249 (264)
T cd06653         200 VEMLTEKPPWAEYEAMAAIFKI---ATQPTK--------------------------PMLPDGVSDACRDFLKQIFV-EE  249 (264)
T ss_pred             HHHHhCCCCCCccCHHHHHHHH---HcCCCC--------------------------CCCCcccCHHHHHHHHHHhc-Cc
Confidence            9999999999765544333222   111111                          11223567899999999999 57


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+.+++.|||.
T Consensus       250 ~~r~~~~~~~~~~~~  264 (264)
T cd06653         250 KRRPTAEFLLRHPFV  264 (264)
T ss_pred             ccCccHHHHhcCCCC
Confidence            999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.87  E-value=7.4e-23  Score=177.89  Aligned_cols=139  Identities=27%  Similarity=0.446  Sum_probs=106.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.........   .....|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       137 ~H~dL~p~Nili~-------~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll  205 (293)
T cd06647         137 IHRDIKSDNILLG-------MDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  205 (293)
T ss_pred             eeccCCHHHEEEc-------CCCCEEEccCcceecccccccc---cccccCChhhcCchhhcc-CCCCchhhHHHHHHHH
Confidence            6999999999998       8899999999998766433211   234578899999998864 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +++++|+.||.+.+...++..+.. .+.+.                          + .....++..+.+++.+||..+|
T Consensus       206 ~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~--------------------------~-~~~~~~~~~l~~li~~~l~~~p  257 (293)
T cd06647         206 IEMVEGEPPYLNENPLRALYLIAT-NGTPE--------------------------L-QNPEKLSAIFRDFLNRCLEMDV  257 (293)
T ss_pred             HHHHhCCCCCCCCChhhheeehhc-CCCCC--------------------------C-CCccccCHHHHHHHHHHccCCh
Confidence            999999999987665443322210 01110                          0 0012346789999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+||++.+++.|+||+..
T Consensus       258 ~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         258 EKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             hhCcCHHHHhcCHHHhcC
Confidence            999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG4721|consensus

Probab=99.87  E-value=1.3e-23  Score=186.20  Aligned_cols=131  Identities=21%  Similarity=0.284  Sum_probs=101.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||.-||||.       .+..|||+|||.++......    ..-.++||..|||||++.+ ...+.++||||+||+|
T Consensus       234 IHRDLKSPNiLIs-------~~d~VKIsDFGTS~e~~~~S----TkMSFaGTVaWMAPEvIrn-ePcsEKVDIwSfGVVL  301 (904)
T KOG4721|consen  234 IHRDLKSPNILIS-------YDDVVKISDFGTSKELSDKS----TKMSFAGTVAWMAPEVIRN-EPCSEKVDIWSFGVVL  301 (904)
T ss_pred             hhhccCCCceEee-------ccceEEeccccchHhhhhhh----hhhhhhhhHhhhCHHHhhc-CCcccccceehhHHHH
Confidence            5999999999999       88999999999999775431    1346799999999999975 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcccc-CCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL-YPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||+||..||..-+...   .|. .+|.-.                          +... ...++..++=||++||+-.
T Consensus       302 WEmLT~EiPYkdVdssA---IIw-GVGsNs--------------------------L~LpvPstcP~GfklL~Kqcw~sK  351 (904)
T KOG4721|consen  302 WEMLTGEIPYKDVDSSA---IIW-GVGSNS--------------------------LHLPVPSTCPDGFKLLLKQCWNSK  351 (904)
T ss_pred             HHHHhcCCCccccchhe---eEE-eccCCc--------------------------ccccCcccCchHHHHHHHHHHhcC
Confidence            99999999996544322   121 112110                          0000 1234577888999999999


Q ss_pred             CCCCCCHHHHhcCC
Q psy7274         165 PHKRIGVEDALAHP  178 (308)
Q Consensus       165 P~~R~t~~eil~hp  178 (308)
                      |..||++.++|.|=
T Consensus       352 pRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  352 PRNRPSFRQILLHL  365 (904)
T ss_pred             CCCCccHHHHHHHH
Confidence            99999999999884

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.87  E-value=3.3e-22  Score=175.78  Aligned_cols=134  Identities=24%  Similarity=0.423  Sum_probs=104.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .||||||+||+++       .++.+||+|||++.....       .....|+..|+|||.+..  ...++.++|+||+||
T Consensus       147 ~H~dL~p~Nil~~-------~~~~~kl~dfg~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGv  212 (317)
T cd06635         147 IHRDIKAGNILLT-------EPGQVKLADFGSASIASP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI  212 (317)
T ss_pred             ccCCCCcccEEEC-------CCCCEEEecCCCccccCC-------cccccCCccccChhhhhcCCCCCCCccccHHHHHH
Confidence            7999999999998       889999999999875432       133478889999998742  244889999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|+.||.+.+....+..+......+                             ......+..+.+++.+||+.
T Consensus       213 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~  263 (317)
T cd06635         213 TCIELAERKPPLFNMNAMSALYHIAQNESPT-----------------------------LQSNEWSDYFRNFVDSCLQK  263 (317)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHhccCCC-----------------------------CCCccccHHHHHHHHHHccC
Confidence            9999999999997766555444443211100                             00123567899999999999


Q ss_pred             CCCCCCCHHHHhcCCcccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~  182 (308)
                      +|.+||++.++++|+|+..
T Consensus       264 ~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         264 IPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             CcccCcCHHHHHhChhhhc
Confidence            9999999999999999954

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=2.2e-22  Score=171.40  Aligned_cols=133  Identities=16%  Similarity=0.176  Sum_probs=98.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................++..|+|||.+.+ ..++.++||||+||++
T Consensus       117 ~H~di~p~nili~-------~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  188 (257)
T cd05060         117 VHRDLAARNVLLV-------NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYGVTL  188 (257)
T ss_pred             eccCcccceEEEc-------CCCcEEeccccccceeecCCcccccccCccccccccCHHHhcC-CCCCccchHHHHHHHH
Confidence            7999999999999       8999999999999876433211110111223457999998854 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |..||...+..+....+......                              ......+..+.++|.+||..+
T Consensus       189 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         189 WEAFSYGAKPYGEMKGAEVIAMLESGERL------------------------------PRPEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             HHHHcCCCCCcccCCHHHHHHHHHcCCcC------------------------------CCCCCCCHHHHHHHHHHhcCC
Confidence            99997 99999776654443333211000                              011245788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||++.++++
T Consensus       239 p~~Rp~~~~l~~  250 (257)
T cd05060         239 PEDRPTFSELES  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.87  E-value=3.3e-22  Score=172.47  Aligned_cols=132  Identities=18%  Similarity=0.249  Sum_probs=97.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++||||+||++
T Consensus       131 iH~dlkp~Nil~~-------~~~~~kL~dfG~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l  201 (279)
T cd05109         131 VHRDLAARNVLVK-------SPNHVKITDFGLARLLDIDETEYH-ADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTV  201 (279)
T ss_pred             eccccccceEEEc-------CCCcEEECCCCceeecccccceee-cCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHH
Confidence            6999999999998       788999999999987653321111 122345678999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |..||.+.........+... ..++                             ..+..+.++.+++.+||..|
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~-----------------------------~~~~~~~~~~~li~~~l~~d  251 (279)
T cd05109         202 WELMTFGAKPYDGIPAREIPDLLEKG-ERLP-----------------------------QPPICTIDVYMIMVKCWMID  251 (279)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHCC-CcCC-----------------------------CCccCCHHHHHHHHHHcCCC
Confidence            99998 88999765543332222111 0000                             01245788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||++.+++.
T Consensus       252 p~~Rp~~~~l~~  263 (279)
T cd05109         252 SECRPRFRELVD  263 (279)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999983

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.87  E-value=1.9e-22  Score=175.02  Aligned_cols=131  Identities=16%  Similarity=0.209  Sum_probs=99.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++....... ........++..|+|||++.+ ..++.++||||+||++
T Consensus       145 ~H~dlkp~Nil~~-------~~~~~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  215 (291)
T cd05094         145 VHRDLATRNCLVG-------ANLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVIL  215 (291)
T ss_pred             eecccCcceEEEc-------cCCcEEECCCCcccccCCCce-eecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       889999999999986543221 111233467889999998865 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||...+..+.+..+.....                              .......+..+.+++.+||+.+
T Consensus       216 ~el~t~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~  265 (291)
T cd05094         216 WEIFTYGKQPWFQLSNTEVIECITQGRV------------------------------LERPRVCPKEVYDIMLGCWQRE  265 (291)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhCCCC------------------------------CCCCccCCHHHHHHHHHHcccC
Confidence            99998 9999977665544433321100                              0011234678999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |.+|||+.+++
T Consensus       266 P~~Rpt~~~v~  276 (291)
T cd05094         266 PQQRLNIKEIY  276 (291)
T ss_pred             hhhCcCHHHHH
Confidence            99999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG1035|consensus

Probab=99.87  E-value=1.9e-22  Score=192.25  Aligned_cols=141  Identities=25%  Similarity=0.401  Sum_probs=102.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccC----------C-----CCCCCCCccCcccccccchhhHhhCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD----------P-----EHDHTGFLTEYVATRWYRAPEIMLNS   69 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~----------~-----~~~~~~~~~~~~gt~~y~aPE~l~~~   69 (308)
                      -.||||||.||+++       +++.|||+|||+|....          .     .....+..|+.+||..|.|||++-+.
T Consensus       718 iIHRDLKP~NIFLd-------~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~  790 (1351)
T KOG1035|consen  718 IIHRDLKPRNIFLD-------SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT  790 (1351)
T ss_pred             eeeccCCcceeEEc-------CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence            47999999999999       99999999999998721          0     01122246888999999999998654


Q ss_pred             C--CCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCC
Q psy7274          70 K--GYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP  147 (308)
Q Consensus        70 ~--~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (308)
                      .  .|+.++||||+|+||+||+.-   |...  .+....+.+.- .+                  .+|..     ..++.
T Consensus       791 ~~~~Yn~KiDmYSLGIVlFEM~yP---F~Ts--MERa~iL~~LR-~g------------------~iP~~-----~~f~~  841 (1351)
T KOG1035|consen  791 SSNKYNSKIDMYSLGIVLFEMLYP---FGTS--MERASILTNLR-KG------------------SIPEP-----ADFFD  841 (1351)
T ss_pred             ccccccchhhhHHHHHHHHHHhcc---CCch--HHHHHHHHhcc-cC------------------CCCCC-----ccccc
Confidence            4  599999999999999999863   5432  33333332211 10                  01111     12223


Q ss_pred             CCChhHHHHHHHhcccCCCCCCCHHHHhcCCccc
Q psy7274         148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       148 ~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~  181 (308)
                      +.-+....+|+.||+.||.+||||.|+|++.||-
T Consensus       842 ~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  842 PEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             ccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            3446778999999999999999999999999995

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.87  E-value=2.1e-22  Score=174.07  Aligned_cols=134  Identities=18%  Similarity=0.239  Sum_probs=101.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++........ .......++..|+|||++.+ ..++.++|+||+||+
T Consensus       145 i~H~dlkp~nili~-------~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i  215 (283)
T cd05090         145 FVHKDLAARNILIG-------EQLHVKISDLGLSREIYSADYY-RVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVV  215 (283)
T ss_pred             eehhccccceEEEc-------CCCcEEeccccccccccCCcce-ecccCCCccceecChHHhcc-CCCCchhhhHHHHHH
Confidence            37999999999999       8889999999999865432211 11233456778999999865 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||++ |..||.+.+.......+......                              ......+..+.+++.+||+.
T Consensus       216 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~  265 (283)
T cd05090         216 LWEIFSFGLQPYYGFSNQEVIEMVRKRQLL------------------------------PCSEDCPPRMYSLMTECWQE  265 (283)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCCcC------------------------------CCCCCCCHHHHHHHHHHccc
Confidence            999998 99999887655444433221100                              01124578899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+||++.+++++
T Consensus       266 ~p~~Rp~~~~i~~~  279 (283)
T cd05090         266 GPSRRPRFKDIHTR  279 (283)
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.87  E-value=2.1e-22  Score=175.34  Aligned_cols=131  Identities=20%  Similarity=0.224  Sum_probs=98.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||++........    .....++..|+|||++.+ ..++.++||||+||+
T Consensus       140 ivH~dlkp~Nill~-------~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~i  207 (297)
T cd05089         140 FIHRDLAARNVLVG-------ENLASKIADFGLSRGEEVYVK----KTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVL  207 (297)
T ss_pred             cccCcCCcceEEEC-------CCCeEEECCcCCCccccceec----cCCCCcCccccCchhhcc-CCCCchhhHHHHHHH
Confidence            36999999999999       889999999999875322111    111123457999998864 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||++ |..||.+....+....+......+                              ....++..+.+|+.+||..
T Consensus       208 l~el~t~g~~pf~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~  257 (297)
T cd05089         208 LWEIVSLGGTPYCGMTCAELYEKLPQGYRME------------------------------KPRNCDDEVYELMRQCWRD  257 (297)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC------------------------------CCCCCCHHHHHHHHHHcCC
Confidence            999997 999998877655544432211100                              1124678999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      +|.+|||++++++.
T Consensus       258 ~p~~Rp~~~~i~~~  271 (297)
T cd05089         258 RPYERPPFAQISVQ  271 (297)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999998754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.87  E-value=1.9e-22  Score=171.34  Aligned_cols=135  Identities=24%  Similarity=0.427  Sum_probs=105.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||+|+||+++       .++.++|+|||++.......   ......+|+..|+|||.+.+ ..++.++|+||+|++
T Consensus       124 ~~H~dl~~~nil~~-------~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~  192 (258)
T cd08215         124 ILHRDIKPQNIFLT-------SNGLVKLGDFGISKVLSSTV---DLAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCV  192 (258)
T ss_pred             EecccCChHHeEEc-------CCCcEEECCccceeecccCc---ceecceeeeecccChhHhcc-CCCCccccHHHHHHH
Confidence            36999999999999       78999999999998765432   11234578999999998764 458899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||...+.......+.....                              ..+....+..+.+++.+||..+
T Consensus       193 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~i~~~l~~~  242 (258)
T cd08215         193 LYELCTLKHPFEGENLLELALKILKGQY------------------------------PPIPSQYSSELRNLVSSLLQKD  242 (258)
T ss_pred             HHHHHcCCCCCCCCcHHHHHHHHhcCCC------------------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence            9999999999977664433333221100                              0111245788999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |++|||+.++|+||||
T Consensus       243 p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         243 PEERPSIAQILQSPFI  258 (258)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.87  E-value=1.5e-22  Score=175.58  Aligned_cols=143  Identities=22%  Similarity=0.354  Sum_probs=104.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++       .++.+||+|||+++.......  .......|+..|+|||.+.+. ..++.++|+||+||
T Consensus       126 i~H~dl~p~nil~~-------~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~  196 (290)
T cd05613         126 IIYRDIKLENILLD-------SNGHVVLTDFGLSKEFHEDEV--ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGV  196 (290)
T ss_pred             eeccCCCHHHeEEC-------CCCCEEEeeCccceecccccc--cccccccCCcccCChhhccCCCCCCCccccHHHHHH
Confidence            37999999999999       889999999999987543221  112345789999999998643 24678999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|..||...........+......                   ..+        .....+++.+.+++.+||..
T Consensus       197 ~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-------------------~~~--------~~~~~~~~~~~~ll~~~l~~  249 (290)
T cd05613         197 LMYELLTGASPFTVDGEKNSQAEISRRILK-------------------SEP--------PYPQEMSALAKDIIQRLLMK  249 (290)
T ss_pred             HHHHHhcCCCCCCcCCccccHHHHHHHhhc-------------------cCC--------CCCccCCHHHHHHHHHHhcC
Confidence            999999999999654322222222111000                   000        01123578899999999999


Q ss_pred             CCCCCC-----CHHHHhcCCccccc
Q psy7274         164 NPHKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~-----t~~eil~hp~f~~~  183 (308)
                      ||++|+     ++++++.||||+..
T Consensus       250 ~p~~R~~~~~~~~~~l~~~~~~~~~  274 (290)
T cd05613         250 DPKKRLGCGPSDADEIKKHPFFQKI  274 (290)
T ss_pred             CHHHhcCCCCCCHHHHHcCcccccC
Confidence            999997     78999999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.87  E-value=2.2e-22  Score=171.73  Aligned_cols=132  Identities=20%  Similarity=0.283  Sum_probs=100.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++........  ......++..|+|||.+.+ ..++.++|+||+||+
T Consensus       124 i~H~dl~p~nili~-------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~  193 (261)
T cd05072         124 YIHRDLRAANVLVS-------ESLMCKIADFGLARVIEDNEYT--AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGIL  193 (261)
T ss_pred             eeccccchhhEEec-------CCCcEEECCCccceecCCCcee--ccCCCccceecCCHHHhcc-CCCChhhhhhhhHHH
Confidence            36999999999999       8899999999999876432211  1223356678999999864 458899999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|+|++ |..||.+.........+......+                              ....++.++.+++.+||..
T Consensus       194 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~  243 (261)
T cd05072         194 LYEIVTYGKIPYPGMSNSDVMSALQRGYRMP------------------------------RMENCPDELYDIMKTCWKE  243 (261)
T ss_pred             HHHHHccCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCCCCCHHHHHHHHHHccC
Confidence            999998 999998876555444443211110                              1124568899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|++|||++++++
T Consensus       244 ~p~~Rp~~~~i~~  256 (261)
T cd05072         244 KAEERPTFDYLQS  256 (261)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999998863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.87  E-value=3.5e-22  Score=172.44  Aligned_cols=132  Identities=19%  Similarity=0.227  Sum_probs=98.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ ...+...++..|+|||.+.+ ..++.++||||+||++
T Consensus       131 iH~dlkp~nili~-------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il  201 (279)
T cd05111         131 VHRNLAARNILLK-------SDSIVQIADFGVADLLYPDDKK-YFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTV  201 (279)
T ss_pred             eccccCcceEEEc-------CCCcEEEcCCccceeccCCCcc-cccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHH
Confidence            6999999999999       8899999999999876433211 11234457778999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||+++ |..||.+.........+... ..+.                             .....+.++.+++.+|+..|
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~-----------------------------~~~~~~~~~~~li~~c~~~~  251 (279)
T cd05111         202 WEMMSYGAEPYAGMRPHEVPDLLEKG-ERLA-----------------------------QPQICTIDVYMVMVKCWMID  251 (279)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHCC-CcCC-----------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            99998 99999876644332222110 0000                             00123567899999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       252 p~~Rps~~el~~  263 (279)
T cd05111         252 ENVRPTFKELAN  263 (279)
T ss_pred             cccCcCHHHHHH
Confidence            999999999865

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG1167|consensus

Probab=99.87  E-value=1.4e-22  Score=173.93  Aligned_cols=172  Identities=32%  Similarity=0.431  Sum_probs=117.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC--------------C----------------CCC-----
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH--------------D----------------HTG-----   49 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~--------------~----------------~~~-----   49 (308)
                      -.||||||+|+|.+.      ..+.-.|+|||+|.......              .                ..+     
T Consensus       153 IvHRDiKpsNFL~n~------~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~  226 (418)
T KOG1167|consen  153 IVHRDIKPSNFLYNR------RTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRC  226 (418)
T ss_pred             ccccCCCcccccccc------ccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceecc
Confidence            369999999999984      67888999999997211000              0                000     


Q ss_pred             ------CccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCC-CCCCHHHHHHHHHHhhCCCChhhHhhh
Q psy7274          50 ------FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIF-PGKHYLDQLNHILGILGSPTPEDLSCI  122 (308)
Q Consensus        50 ------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf-~~~~~~~~l~~i~~~~~~p~~~~~~~~  122 (308)
                            .-....||++|+|||+++....-++++||||.|+|+..+++++.|| ...++.+.+..|+.++|...-..+...
T Consensus       227 ~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l  306 (418)
T KOG1167|consen  227 NDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAAL  306 (418)
T ss_pred             CCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhc
Confidence                  0134579999999999998777899999999999999999998665 667777888888887775433322211


Q ss_pred             hhH-------------HHHHHhhcC-----CCCCC--CCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         123 INE-------------KARSYLQSL-----PFKPK--VPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       123 ~~~-------------~~~~~~~~~-----~~~~~--~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ...             +.+....++     .....  ..........+..+.+|+.+||..||.+|+||+++|+||||..
T Consensus       307 ~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  307 PGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             CCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence            111             001111111     00000  1111112234568999999999999999999999999999973

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=2.3e-22  Score=174.27  Aligned_cols=142  Identities=27%  Similarity=0.429  Sum_probs=102.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||+|+||+++       .++.++|+|||++.......     .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       126 i~H~dl~~~nil~~-------~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~i  192 (287)
T cd06621         126 IIHRDIKPSNILLT-------RKGQVKLCDFGVSGELVNSL-----AGTFTGTSFYMAPERIQG-KPYSITSDVWSLGLT  192 (287)
T ss_pred             cccCCCCHHHEEEe-------cCCeEEEeeccccccccccc-----cccccCCccccCHHHhcC-CCCCchhhHHHHHHH
Confidence            37999999999998       88899999999987654321     123467889999998754 568999999999999


Q ss_pred             HHHHhhCCCCCCCCCH-----HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          85 LAEMISNRPIFPGKHY-----LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        85 l~ell~g~~pf~~~~~-----~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      +|+|++|+.||.....     .+....+..   ...+.                .+....     .-...++.+.+||.+
T Consensus       193 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~----------------~~~~~~-----~~~~~~~~~~~li~~  248 (287)
T cd06621         193 LLEVAQNRFPFPPEGEPPLGPIELLSYIVN---MPNPE----------------LKDEPG-----NGIKWSEEFKDFIKQ  248 (287)
T ss_pred             HHHHHhCCCCCCcccCCCCChHHHHHHHhc---CCchh----------------hccCCC-----CCCchHHHHHHHHHH
Confidence            9999999999976531     111111110   00000                000000     001235789999999


Q ss_pred             hcccCCCCCCCHHHHhcCCccccc
Q psy7274         160 MLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||..+|.+|||+.|+++||||+..
T Consensus       249 ~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         249 CLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             HcCCCcccCCCHHHHHhCcccccc
Confidence            999999999999999999999654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.87  E-value=1.9e-22  Score=171.62  Aligned_cols=132  Identities=25%  Similarity=0.386  Sum_probs=102.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.++|+|||+++.......   ......|+..|+|||++.+ ..++.++|+||+||+
T Consensus       121 i~H~dl~p~nili~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i  189 (255)
T cd08219         121 VLHRDIKSKNIFLT-------QNGKVKLGDFGSARLLTSPGA---YACTYVGTPYYVPPEIWEN-MPYNNKSDIWSLGCI  189 (255)
T ss_pred             cccCCCCcceEEEC-------CCCcEEEcccCcceeeccccc---ccccccCCccccCHHHHcc-CCcCchhhhhhhchh
Confidence            37999999999998       889999999999986643221   1234578999999999754 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+.+.......+......                              ......+..+.+|+.+||..|
T Consensus       190 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~  239 (255)
T cd08219         190 LYELCTLKHPFQANSWKNLILKVCQGSYK------------------------------PLPSHYSYELRSLIKQMFKRN  239 (255)
T ss_pred             heehhhccCCCCCCCHHHHHHHHhcCCCC------------------------------CCCcccCHHHHHHHHHHHhCC
Confidence            99999999999877655444433221100                              011235678999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.++++-
T Consensus       240 P~~Rp~~~~il~~  252 (255)
T cd08219         240 PRSRPSATTILSR  252 (255)
T ss_pred             cccCCCHHHHhhc
Confidence            9999999999853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.87  E-value=5.2e-22  Score=168.99  Aligned_cols=133  Identities=19%  Similarity=0.237  Sum_probs=102.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||.++........ .......++..|+|||.+.+ ..++.++|+||+||++
T Consensus       127 ~H~di~p~nili~-------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  197 (262)
T cd00192         127 VHRDLAARNCLVG-------EDLVVKISDFGLSRDVYDDDYY-RKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLL  197 (262)
T ss_pred             ccCccCcceEEEC-------CCCcEEEccccccccccccccc-ccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHH
Confidence            7999999999999       8899999999999876543211 11234467889999998865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+....+....+.....                              ......++.++.+++.+||+.+
T Consensus       198 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~  247 (262)
T cd00192         198 WEIFTLGATPYPGLSNEEVLEYLRKGYR------------------------------LPKPEYCPDELYELMLSCWQLD  247 (262)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCC------------------------------CCCCccCChHHHHHHHHHccCC
Confidence            99998 6999988765555444432100                              0112245789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+++++++
T Consensus       248 p~~Rps~~~l~~~  260 (262)
T cd00192         248 PEDRPTFSELVER  260 (262)
T ss_pred             cccCcCHHHHHHh
Confidence            9999999999865

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.87  E-value=2.3e-22  Score=173.33  Aligned_cols=138  Identities=22%  Similarity=0.366  Sum_probs=106.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.++|+|||++........   ......++..|+|||.+.+ ...+.++|+||+||+
T Consensus       122 i~h~dl~p~Ni~i~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~  190 (277)
T cd06641         122 KIHRDIKAANVLLS-------EHGEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGIT  190 (277)
T ss_pred             eecCCCCHHhEEEC-------CCCCEEEeecccceecccchh---hhccccCCccccChhhhcc-CCCCchhhHHHHHHH
Confidence            37999999999999       889999999999876643211   1233578889999998764 458889999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+.........+... + +                            ..+....+.++.+++.+||+.+
T Consensus       191 l~~l~~g~~p~~~~~~~~~~~~~~~~-~-~----------------------------~~~~~~~~~~~~~~i~~~l~~~  240 (277)
T cd06641         191 AIELAKGEPPHSELHPMKVLFLIPKN-N-P----------------------------PTLEGNYSKPLKEFVEACLNKE  240 (277)
T ss_pred             HHHHHcCCCCCCccchHHHHHHHhcC-C-C----------------------------CCCCcccCHHHHHHHHHHccCC
Confidence            99999999999765543333222110 0 0                            0111245788999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+||++.++++||||...
T Consensus       241 p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         241 PSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             hhhCcCHHHHHhCHHHhhh
Confidence            9999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.87  E-value=4.2e-22  Score=172.00  Aligned_cols=132  Identities=17%  Similarity=0.241  Sum_probs=99.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......++..|+|||.+.+ ..++.++||||+||++
T Consensus       144 ~H~dlkp~nil~~-------~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  214 (280)
T cd05092         144 VHRDLATRNCLVG-------QGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVL  214 (280)
T ss_pred             ecccccHhhEEEc-------CCCCEEECCCCceeEcCCCcee-ecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHH
Confidence            6999999999998       8899999999999865432111 11123345778999998865 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |.+||......+.+..+......                              .....+++.+.+++.+||+.|
T Consensus       215 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~~  264 (280)
T cd05092         215 WEIFTYGKQPWYQLSNTEAIECITQGREL------------------------------ERPRTCPPEVYAIMQGCWQRE  264 (280)
T ss_pred             HHHHcCCCCCCccCCHHHHHHHHHcCccC------------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            99998 89999776655544433221100                              011245688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||+++++++
T Consensus       265 P~~Rp~~~~l~~  276 (280)
T cd05092         265 PQQRMVIKDIHS  276 (280)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.87  E-value=2.2e-22  Score=174.77  Aligned_cols=133  Identities=20%  Similarity=0.266  Sum_probs=99.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||++.+ ..++.++||||+||++
T Consensus       154 vH~dlkp~Nil~~-------~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  224 (293)
T cd05053         154 IHRDLAARNVLVT-------EDHVMKIADFGLARDIHHIDYYRK-TTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLL  224 (293)
T ss_pred             cccccceeeEEEc-------CCCeEEeCccccccccccccceec-cCCCCCCccccCHHHhcc-CCcCcccceeehhhHH
Confidence            7999999999998       889999999999987643221111 122234567999998754 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |..||.+....+....+......                              ......+..+.+|+.+||..|
T Consensus       225 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~  274 (293)
T cd05053         225 WEIFTLGGSPYPGIPVEELFKLLKEGYRM------------------------------EKPQNCTQELYHLMRDCWHEV  274 (293)
T ss_pred             HHHhcCCCCCCCCCCHHHHHHHHHcCCcC------------------------------CCCCCCCHHHHHHHHHHcccC
Confidence            99997 88999887655544433211100                              011245688999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.+++++
T Consensus       275 p~~Rps~~eil~~  287 (293)
T cd05053         275 PSQRPTFKQLVED  287 (293)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.87  E-value=7e-22  Score=172.58  Aligned_cols=133  Identities=18%  Similarity=0.257  Sum_probs=98.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++||||+||++
T Consensus       131 vH~dikp~Nill~-------~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l  201 (303)
T cd05110         131 VHRDLAARNVLVK-------SPNHVKITDFGLARLLEGDEKEYN-ADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTI  201 (303)
T ss_pred             eccccccceeeec-------CCCceEEccccccccccCcccccc-cCCCccccccCCHHHhcc-CCCChHHHHHHHHHHH
Confidence            6999999999998       788999999999987643321111 223456778999999864 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+++ |..||.+.........+... ..+                    +         ..+..+..+.+++.+|+..+
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~-~~~--------------------~---------~~~~~~~~~~~li~~c~~~~  251 (303)
T cd05110         202 WELMTFGGKPYDGIPTREIPDLLEKG-ERL--------------------P---------QPPICTIDVYMVMVKCWMID  251 (303)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHCC-CCC--------------------C---------CCCCCCHHHHHHHHHHcCCC
Confidence            99997 88999776543332222110 000                    0         01234678999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++||+++++++.
T Consensus       252 p~~Rp~~~~l~~~  264 (303)
T cd05110         252 ADSRPKFKELAAE  264 (303)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998763

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.87  E-value=3.5e-22  Score=170.45  Aligned_cols=131  Identities=23%  Similarity=0.308  Sum_probs=99.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++..........  .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       123 i~H~di~p~Nili~-------~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~  192 (260)
T cd05070         123 YIHRDLRSANILVG-------DGLVCKIADFGLARLIEDNEYTA--RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGIL  192 (260)
T ss_pred             cccCCCccceEEEe-------CCceEEeCCceeeeeccCccccc--ccCCCCCccccChHHHhc-CCCcchhhhHHHHHH
Confidence            37999999999998       88999999999998764322111  122345668999998764 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+.+..+....+......+                              .....+..+.+|+.+||..
T Consensus       193 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~  242 (260)
T cd05070         193 LTELVTKGRVPYPGMNNREVLEQVERGYRMP------------------------------CPQDCPISLHELMLQCWKK  242 (260)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCCcCCHHHHHHHHHHccc
Confidence            999999 889998877665555443211100                              1124568899999999999


Q ss_pred             CCCCCCCHHHHh
Q psy7274         164 NPHKRIGVEDAL  175 (308)
Q Consensus       164 dP~~R~t~~eil  175 (308)
                      +|++|||+.+++
T Consensus       243 ~p~~Rpt~~~l~  254 (260)
T cd05070         243 DPEERPTFEYLQ  254 (260)
T ss_pred             CcccCcCHHHHH
Confidence            999999999886

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.87  E-value=4.4e-22  Score=169.71  Aligned_cols=133  Identities=15%  Similarity=0.168  Sum_probs=98.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++............+...++..|+|||.+.+ ..++.++|+||+||++
T Consensus       117 ~H~dlkp~nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  188 (257)
T cd05115         117 VHRDLAARNVLLV-------NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGITM  188 (257)
T ss_pred             eecccchheEEEc-------CCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHHHH
Confidence            7999999999998       8899999999999865433211111122233568999998764 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |..||.+....+....+.....                              ....+..++++.++|.+||..+
T Consensus       189 ~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         189 WEAFSYGQKPYKKMKGPEVMSFIEQGKR------------------------------LDCPAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHHHCCCC------------------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence            99996 9999987765554433322110                              0011345789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++||++.++.+
T Consensus       239 ~~~Rp~~~~i~~  250 (257)
T cd05115         239 WEDRPNFAKVEE  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=3.7e-22  Score=171.77  Aligned_cols=132  Identities=20%  Similarity=0.294  Sum_probs=100.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......+|..|+|||.+.+ ..++.++|+||+||++
T Consensus       141 ~H~di~p~nill~-------~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  211 (277)
T cd05032         141 VHRDLAARNCMVA-------EDLTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVL  211 (277)
T ss_pred             cccccChheEEEc-------CCCCEEECCcccchhhccCccc-ccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHH
Confidence            7999999999999       8999999999999865432211 11233456788999999864 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+++ |..||.+.+.......+... +.+                             ......+..+.+++.+||+.+
T Consensus       212 ~el~t~g~~p~~~~~~~~~~~~~~~~-~~~-----------------------------~~~~~~~~~~~~li~~~l~~~  261 (277)
T cd05032         212 WEMATLAEQPYQGLSNEEVLKFVIDG-GHL-----------------------------DLPENCPDKLLELMRMCWQYN  261 (277)
T ss_pred             HHhhccCCCCCccCCHHHHHHHHhcC-CCC-----------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            99998 99999877655544433210 000                             011234688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       262 p~~Rpt~~~l~~  273 (277)
T cd05032         262 PKMRPTFLEIVS  273 (277)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.87  E-value=5.5e-22  Score=168.94  Aligned_cols=132  Identities=15%  Similarity=0.209  Sum_probs=98.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.........  .....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       122 ~H~dl~p~ni~i~-------~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il  191 (256)
T cd05059         122 IHRDLAARNCLVG-------EDNVVKVSDFGLARYVLDDQYTS--SQGTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLM  191 (256)
T ss_pred             ccccccHhhEEEC-------CCCcEEECCcccceecccccccc--cCCCCCCccccCHHHhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       88999999999998654321111  111233457999998864 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |++++ |+.||.+.+..+....+......+                              .....+..+.+++.+||..+
T Consensus       192 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05059         192 WEVFSEGKMPYERFSNSEVVESVSAGYRLY------------------------------RPKLAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             HHHhccCCCCCCCCCHHHHHHHHHcCCcCC------------------------------CCCCCCHHHHHHHHHHhcCC
Confidence            99998 789998776555444432211100                              01235789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||++++++.
T Consensus       242 p~~Rpt~~~~l~~  254 (256)
T cd05059         242 PEDRPAFKKLLSQ  254 (256)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999853

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.87  E-value=4.7e-22  Score=170.37  Aligned_cols=133  Identities=19%  Similarity=0.302  Sum_probs=99.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++..................+..|+|||++.+ ..++.++|+||+||++
T Consensus       129 ~H~dlkp~Nili~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il  200 (268)
T cd05063         129 VHRDLAARNILVN-------SNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVM  200 (268)
T ss_pred             eccccchhhEEEc-------CCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHH
Confidence            6999999999998       8899999999999866432211110111223457999998865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||+++ |..||.+.+..+....+......|..                              ...+.++.+++.+||+.+
T Consensus       201 ~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~------------------------------~~~~~~~~~li~~c~~~~  250 (268)
T cd05063         201 WEVMSFGERPYWDMSNHEVMKAINDGFRLPAP------------------------------MDCPSAVYQLMLQCWQQD  250 (268)
T ss_pred             HHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCC------------------------------CCCCHHHHHHHHHHcCCC
Confidence            99997 99999877665555554322111111                              134678999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||++.++++
T Consensus       251 p~~Rp~~~~i~~  262 (268)
T cd05063         251 RARRPRFVDIVN  262 (268)
T ss_pred             cccCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.87  E-value=3.8e-22  Score=179.29  Aligned_cols=134  Identities=22%  Similarity=0.294  Sum_probs=97.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......... ......++..|+|||++.+ ..++.++||||+||++
T Consensus       236 vH~Dlkp~Nill~-------~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l  306 (375)
T cd05104         236 IHRDLAARNILLT-------HGRITKICDFGLARDIRNDSNYV-VKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILL  306 (375)
T ss_pred             eccCCchhhEEEE-------CCCcEEEecCccceeccCccccc-ccCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHH
Confidence            6999999999998       78899999999998764332111 1122345667999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+......+..+...-..                        .     ......+.++.+|+.+||..|
T Consensus       307 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~------------------------~-----~~~~~~~~~l~~li~~cl~~d  357 (375)
T cd05104         307 WEIFSLGSSPYPGMPVDSKFYKMIKEGYR------------------------M-----LSPECAPSEMYDIMKSCWDAD  357 (375)
T ss_pred             HHHHhcCCCCCCCCCchHHHHHHHHhCcc------------------------C-----CCCCCCCHHHHHHHHHHccCC
Confidence            99998 88899775433322222110000                        0     001124678999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||+.++++.
T Consensus       358 P~~RPs~~eil~~  370 (375)
T cd05104         358 PLKRPTFKQIVQL  370 (375)
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=6.8e-22  Score=167.69  Aligned_cols=134  Identities=24%  Similarity=0.412  Sum_probs=104.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.........   .....++..|+|||.+.+ ..++.++|+||+|+++
T Consensus       121 ~H~dl~p~ni~i~-------~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l  189 (254)
T cd06627         121 IHRDIKAANILTT-------KDGVVKLADFGVATKLNDVSKD---DASVVGTPYWMAPEVIEM-SGASTASDIWSLGCTV  189 (254)
T ss_pred             ccCCCCHHHEEEC-------CCCCEEEeccccceecCCCccc---ccccccchhhcCHhhhcC-CCCCcchhHHHHHHHH
Confidence            6999999999998       7899999999999876543221   234578889999998754 4488999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||...+.......+...                              ........++..+.+++.+||..+|
T Consensus       190 ~~l~~g~~p~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~i~~~l~~~p  239 (254)
T cd06627         190 IELLTGNPPYYDLNPMAALFRIVQD------------------------------DHPPLPEGISPELKDFLMQCFQKDP  239 (254)
T ss_pred             HHHHhCCCCCCCccHHHHHHHHhcc------------------------------CCCCCCCCCCHHHHHHHHHHHhCCh
Confidence            9999999999765543333222110                              0001123467899999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      ++|||+.+++.||||
T Consensus       240 ~~R~~~~~~l~~~~~  254 (254)
T cd06627         240 NLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.87  E-value=4.8e-22  Score=169.26  Aligned_cols=127  Identities=19%  Similarity=0.282  Sum_probs=97.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++......      ....++..|+|||++.+ ..++.++||||+||++
T Consensus       124 ~H~dlkp~nil~~-------~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~  189 (256)
T cd05082         124 VHRDLAARNVLVS-------EDNVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILL  189 (256)
T ss_pred             eccccchheEEEc-------CCCcEEecCCccceeccccC------CCCccceeecCHHHHcc-CCCCchhhhHHHHHHH
Confidence            7999999999999       89999999999998654321      22345668999998754 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++ |+.||...+..+....+.....                              ....+..++.+.+++.+||..+
T Consensus       190 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~  239 (256)
T cd05082         190 WEIYSFGRVPYPRIPLKDVVPRVEKGYK------------------------------MDAPDGCPPVVYDVMKQCWHLD  239 (256)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhcCCC------------------------------CCCCCCCCHHHHHHHHHHhcCC
Confidence            99997 9999977665444333321100                              0112346789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       240 p~~Rpt~~~l~~  251 (256)
T cd05082         240 AATRPSFLQLRE  251 (256)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.87  E-value=9.4e-22  Score=167.11  Aligned_cols=132  Identities=24%  Similarity=0.372  Sum_probs=104.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.......     .....++..|++||.+.+ ..++.++|+||+|+++
T Consensus       125 ~h~~l~~~ni~~~-------~~~~~kl~d~g~~~~~~~~~-----~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~  191 (256)
T cd08530         125 LHRDLKSANILLV-------ANDLVKIGDLGISKVLKKNM-----AKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLL  191 (256)
T ss_pred             ccCCCCcceEEEe-------cCCcEEEeeccchhhhccCC-----cccccCCccccCHHHHCC-CCCCchhhHHHHHHHH
Confidence            6999999999999       78999999999998765431     233468889999999864 5588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+.......+.....                              .......+.++.+++.+||..+|
T Consensus       192 ~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~p  241 (256)
T cd08530         192 YEMATFAPPFEARSMQDLRYKVQRGKY------------------------------PPIPPIYSQDLQNFIRSMLQVKP  241 (256)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHhcCCC------------------------------CCCchhhCHHHHHHHHHHcCCCc
Confidence            999999999987765443332221100                              01112356889999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+.++++||++
T Consensus       242 ~~Rp~~~~~l~~p~~  256 (256)
T cd08530         242 KLRPNCDKILASPAV  256 (256)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.87  E-value=2.5e-22  Score=171.15  Aligned_cols=134  Identities=27%  Similarity=0.458  Sum_probs=103.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.++|+|||++........    .....|+..|+|||++.+ ..++.++|+||+||+
T Consensus       121 i~h~dl~~~nil~~-------~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~  188 (258)
T cd05578         121 IIHRDIKPDNILLD-------EQGHVHITDFNIATKVTPDTL----TTSTSGTPGYMAPEVLCR-QGYSVAVDWWSLGVT  188 (258)
T ss_pred             eeccCCCHHHeEEc-------CCCCEEEeecccccccCCCcc----ccccCCChhhcCHHHHcc-cCCCCcccchhhHHH
Confidence            37999999999999       899999999999987644321    234568889999999864 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHH--HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYL--DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~--~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++|++|..||...+..  +.+......   ..                           ....+..+..+.++|.+||.
T Consensus       189 l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~---------------------------~~~~~~~~~~~~~~i~~~l~  238 (258)
T cd05578         189 AYECLRGKRPYRGHSRTIRDQIRAKQET---AD---------------------------VLYPATWSTEAIDAINKLLE  238 (258)
T ss_pred             HHHHHhCCCCCCCCCccHHHHHHHHhcc---cc---------------------------ccCcccCcHHHHHHHHHHcc
Confidence            99999999999876631  111111100   00                           01112456899999999999


Q ss_pred             cCCCCCCCH--HHHhcCCcc
Q psy7274         163 FNPHKRIGV--EDALAHPYL  180 (308)
Q Consensus       163 ~dP~~R~t~--~eil~hp~f  180 (308)
                      .||.+|+++  +|+++||||
T Consensus       239 ~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         239 RDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             CChhHcCCccHHHHhcCCCC
Confidence            999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.87  E-value=4.1e-22  Score=172.48  Aligned_cols=139  Identities=29%  Similarity=0.456  Sum_probs=106.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.+||+|||++.........   .....++..|+|||++.+ ..++.++|+||+||+
T Consensus       137 i~H~dl~p~ni~i~-------~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvi  205 (286)
T cd06614         137 VIHRDIKSDNILLS-------KDGSVKLADFGFAAQLTKEKSK---RNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIM  205 (286)
T ss_pred             eeeCCCChhhEEEc-------CCCCEEECccchhhhhccchhh---hccccCCcccCCHhHhcC-CCCCCccccHHHHHH
Confidence            37999999999999       8899999999998765432211   233457889999998764 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+.......+... +.+..                           .....++..+.++|.+||+.+
T Consensus       206 l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~---------------------------~~~~~~~~~l~~li~~~l~~~  257 (286)
T cd06614         206 CIEMAEGEPPYLREPPLRALFLITTK-GIPPL---------------------------KNPEKWSPEFKDFLNKCLVKD  257 (286)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhc-CCCCC---------------------------cchhhCCHHHHHHHHHHhccC
Confidence            99999999999776654433332211 00000                           001125688999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||+.++++|+||+.
T Consensus       258 p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         258 PEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             hhhCcCHHHHhhChHhhc
Confidence            999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.87  E-value=6.8e-22  Score=169.02  Aligned_cols=131  Identities=24%  Similarity=0.331  Sum_probs=99.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||.++.........  .....++..|+|||++.+ ..++.++|+||+||++
T Consensus       124 ~H~dl~p~Nill~-------~~~~~~L~dfg~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l  193 (262)
T cd05071         124 VHRDLRAANILVG-------ENLVCKVADFGLARLIEDNEYTA--RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILL  193 (262)
T ss_pred             cccccCcccEEEc-------CCCcEEeccCCceeecccccccc--ccCCcccceecCHhHhcc-CCCCchhhHHHHHHHH
Confidence            6999999999998       88999999999998664332111  123356678999998754 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+......+..+......+                              .....+..+.+++.+||+.|
T Consensus       194 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~~  243 (262)
T cd05071         194 TELTTKGRVPYPGMVNREVLDQVERGYRMP------------------------------CPPECPESLHDLMCQCWRKE  243 (262)
T ss_pred             HHHHcCCCCCCCCCChHHHHHHHhcCCCCC------------------------------CccccCHHHHHHHHHHccCC
Confidence            99999 888998776555444432211100                              01235688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++||++.++++
T Consensus       244 p~~Rp~~~~~~~  255 (262)
T cd05071         244 PEERPTFEYLQA  255 (262)
T ss_pred             cccCCCHHHHHH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.87  E-value=7.8e-22  Score=168.26  Aligned_cols=134  Identities=29%  Similarity=0.523  Sum_probs=102.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++        ++.+||+|||++.........   .....|+..|+|||.+. ...++.++|+||+|++
T Consensus       127 i~h~~l~~~nili~--------~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~~  194 (260)
T cd08222         127 ILHRDLKAKNIFLK--------NNLLKIGDFGVSRLLMGSCDL---ATTFTGTPYYMSPEALK-HQGYDSKSDIWSLGCI  194 (260)
T ss_pred             ccccCCChhheEee--------cCCEeecccCceeecCCCccc---ccCCCCCcCccCHHHHc-cCCCCchhhHHHHHHH
Confidence            36999999999996        356999999999876432211   23346788999999875 4558889999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..+|.+.........+..  + +.+                           ......+.++.++|.+||..+
T Consensus       195 ~~~l~~~~~~~~~~~~~~~~~~~~~--~-~~~---------------------------~~~~~~~~~~~~li~~~l~~~  244 (260)
T cd08222         195 LYEMCCLAHAFEGQNFLSVVLRIVE--G-PTP---------------------------SLPETYSRQLNSIMQSMLNKD  244 (260)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHc--C-CCC---------------------------CCcchhcHHHHHHHHHHhcCC
Confidence            9999999999977654443333221  1 100                           011245688999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |++||++.++++||||
T Consensus       245 p~~Rp~~~~il~~~~~  260 (260)
T cd08222         245 PSLRPSAAEILRNPFI  260 (260)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.87  E-value=8e-22  Score=167.01  Aligned_cols=134  Identities=31%  Similarity=0.522  Sum_probs=104.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||||+||+++       .++.++|+|||++........   ......++..|++||.+.+ ...+.++|+||+||+
T Consensus       114 ~~H~~l~p~ni~~~-------~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~  182 (250)
T cd05123         114 IIYRDLKPENILLD-------ADGHIKLTDFGLAKELSSEGS---RTNTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVL  182 (250)
T ss_pred             ceecCCCcceEEEc-------CCCcEEEeecCcceecccCCC---cccCCcCCccccChHHhCC-CCCCchhhHHHHHHH
Confidence            47999999999999       889999999999987643211   1244578889999998864 447889999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++++++|..||...+.......+..  +..                             .+....+..+.++|.+||..|
T Consensus       183 ~~~l~~g~~p~~~~~~~~~~~~~~~--~~~-----------------------------~~~~~~~~~l~~~i~~~l~~~  231 (250)
T cd05123         183 LYEMLTGKPPFYAEDRKEIYEKILK--DPL-----------------------------RFPEFLSPEARDLISGLLQKD  231 (250)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHhc--CCC-----------------------------CCCCCCCHHHHHHHHHHhcCC
Confidence            9999999999977765333333321  000                             011234688999999999999


Q ss_pred             CCCCCCH---HHHhcCCcc
Q psy7274         165 PHKRIGV---EDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~---~eil~hp~f  180 (308)
                      |.+|||+   +++++||||
T Consensus       232 p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         232 PTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HhhCCCcccHHHHHhCCCC
Confidence            9999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.87  E-value=5.2e-22  Score=172.21  Aligned_cols=133  Identities=21%  Similarity=0.253  Sum_probs=99.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++||||+||+
T Consensus       148 ivH~dikp~nill~-------~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~  218 (290)
T cd05045         148 LVHRDLAARNVLVA-------EGRKMKISDFGLSRDVYEEDSYVK-RSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVL  218 (290)
T ss_pred             eehhhhhhheEEEc-------CCCcEEeccccccccccCccchhc-ccCCCCCccccCHHHHcc-CCcchHhHHHHHHHH
Confidence            37999999999998       889999999999986543221111 122345678999998864 558999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+.........+......+                              .....+.++.+++.+||+.
T Consensus       219 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~i~~cl~~  268 (290)
T cd05045         219 LWEIVTLGGNPYPGIAPERLFNLLKTGYRME------------------------------RPENCSEEMYNLMLTCWKQ  268 (290)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCC------------------------------CCCCCCHHHHHHHHHHccC
Confidence            999998 999998776544333322111000                              0124578999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|.+||++.++++
T Consensus       269 ~P~~Rp~~~~i~~  281 (290)
T cd05045         269 EPDKRPTFADISK  281 (290)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.86  E-value=5.5e-22  Score=168.89  Aligned_cols=132  Identities=16%  Similarity=0.219  Sum_probs=100.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.........  .....++..|+|||++.+ ..++.++|+||+||+
T Consensus       121 i~H~dl~p~ni~i~-------~~~~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~  190 (256)
T cd05114         121 FIHRDLAARNCLVS-------STGVVKVSDFGMTRYVLDDEYTS--SSGAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVL  190 (256)
T ss_pred             ccccccCcceEEEc-------CCCeEEECCCCCccccCCCceec--cCCCCCchhhCChhhccc-CccchhhhhHHHHHH
Confidence            37999999999998       88999999999998654322111  122345568999999754 568999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |+.||.+.+..+.+..+........                              ....+..+.+++.+||..
T Consensus       191 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~------------------------------~~~~~~~~~~li~~c~~~  240 (256)
T cd05114         191 MWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR------------------------------PKLASMTVYEVMYSCWHE  240 (256)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC------------------------------CCCCCHHHHHHHHHHccC
Confidence            999999 8999988776665555533111000                              012457899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|++|||++++++
T Consensus       241 ~p~~Rps~~~l~~  253 (256)
T cd05114         241 KPEGRPTFAELLR  253 (256)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0586|consensus

Probab=99.86  E-value=6.9e-23  Score=183.38  Aligned_cols=139  Identities=24%  Similarity=0.383  Sum_probs=112.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      +|||||.+|||++       .+..+||+|||++..+....    .+.+.||++.|.|||++.+....++.+|+||+|+++
T Consensus       177 vHrdLk~eNilL~-------~~mnikIaDfgfS~~~~~~~----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvl  245 (596)
T KOG0586|consen  177 VHRDLKAENILLD-------ENMNIKIADFGFSTFFDYGL----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVL  245 (596)
T ss_pred             eccccchhhcccc-------cccceeeeccccceeecccc----cccccCCCCCccChHhhcCcccCCcceehhhhhhhh
Confidence            6999999999999       88889999999999886432    356789999999999998766668899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |.|+.|..||.|.+..+.-.+.+..                          +-.+     .-.++.++.++|+++|..+|
T Consensus       246 y~LV~GsLPFDG~~lk~Lr~rvl~g--------------------------k~rI-----p~~ms~dce~lLrk~lvl~P  294 (596)
T KOG0586|consen  246 YALVEGSLPFDGQNLKELRPRVLRG--------------------------KYRI-----PFYMSCDCEDLLRKFLVLNP  294 (596)
T ss_pred             eeeeecccccCCcccccccchheee--------------------------eecc-----cceeechhHHHHHHhhccCc
Confidence            9999999999987743332221110                          0011     11368899999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .+|+++++++.|.|.......
T Consensus       295 skr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  295 SKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             cccCCHHHhhhhcccchhhhh
Confidence            999999999999999775443

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.86  E-value=4.9e-22  Score=172.19  Aligned_cols=143  Identities=24%  Similarity=0.409  Sum_probs=103.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC-CCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK-GYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiWSlG~   83 (308)
                      -.||||||.||+++       .++.++|+|||+++.........  .....|+..|+|||.+.+.. ..+.++|+||+||
T Consensus       126 ~~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~  196 (288)
T cd05583         126 IIYRDIKLENILLD-------SEGHVVLTDFGLSKEFLAEEEER--AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGV  196 (288)
T ss_pred             eeccCCCHHHeEEC-------CCCCEEEEECccccccccccccc--cccccCCccccCHHHhcCCCCCCcchhhhHHHHH
Confidence            37999999999999       88999999999998764432111  12346889999999976432 3678999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|..||...........+...                   .....+        .....++..+.++|.+||+.
T Consensus       197 il~el~tg~~p~~~~~~~~~~~~~~~~-------------------~~~~~~--------~~~~~~~~~l~~li~~~l~~  249 (288)
T cd05583         197 LTFELLTGASPFTVDGEQNSQSEISRR-------------------ILKSKP--------PFPKTMSAEARDFIQKLLEK  249 (288)
T ss_pred             HHHHHHhCCCCcccCcccchHHHHHHH-------------------HHccCC--------CCCcccCHHHHHHHHHHhcC
Confidence            999999999999643322111111110                   000000        01123568899999999999


Q ss_pred             CCCCCCC---HHHHhcCCccccc
Q psy7274         164 NPHKRIG---VEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t---~~eil~hp~f~~~  183 (308)
                      ||++|||   +.++|+||||+.+
T Consensus       250 ~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         250 DPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             CHhhccCcchHHHHhcCcccccC
Confidence            9999998   5678999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.86  E-value=7.5e-22  Score=168.50  Aligned_cols=134  Identities=17%  Similarity=0.210  Sum_probs=96.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++       .++.+||+|||+++........ ........++..|+|||.+.+ ..++.++||||+||
T Consensus       119 i~H~dlk~~nili~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~  190 (262)
T cd05058         119 FVHRDLAARNCMLD-------ESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSFGV  190 (262)
T ss_pred             ccccccCcceEEEc-------CCCcEEECCccccccccCCcceeecccccCcCCccccChhHhcc-CccchHHHHHHHHH
Confidence            37999999999999       8899999999999865322110 011123355778999998864 45899999999999


Q ss_pred             HHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++||++ |.++|...+..+....+...  .+.                       .     .....+..+.+++.+||.
T Consensus       191 ~l~el~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------------~-----~~~~~~~~~~~li~~cl~  240 (262)
T cd05058         191 LLWELMTRGAPPYPDVDSFDITVYLLQG--RRL-----------------------L-----QPEYCPDPLYEVMLSCWH  240 (262)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHhcC--CCC-----------------------C-----CCCcCCHHHHHHHHHHcC
Confidence            9999999 46777765544433322210  000                       0     001246789999999999


Q ss_pred             cCCCCCCCHHHHhc
Q psy7274         163 FNPHKRIGVEDALA  176 (308)
Q Consensus       163 ~dP~~R~t~~eil~  176 (308)
                      .+|++||++.++++
T Consensus       241 ~~p~~Rp~~~~il~  254 (262)
T cd05058         241 PKPEMRPTFSELVS  254 (262)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.86  E-value=8.6e-22  Score=168.10  Aligned_cols=131  Identities=23%  Similarity=0.311  Sum_probs=99.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       +++.+||+|||+++.........  .....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       124 ~H~dl~~~Nill~-------~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l  193 (260)
T cd05069         124 IHRDLRAANILVG-------DNLVCKIADFGLARLIEDNEYTA--RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILL  193 (260)
T ss_pred             eecccCcceEEEc-------CCCeEEECCCccceEccCCcccc--cCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHH
Confidence            7999999999999       88999999999998654322111  122346678999998764 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+....+....+......+                              .....+..+.+++.+||..|
T Consensus       194 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05069         194 TELVTKGRVPYPGMVNREVLEQVERGYRMP------------------------------CPQGCPESLHELMKLCWKKD  243 (260)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCcccCHHHHHHHHHHccCC
Confidence            99999 899998876655544443211100                              01235688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||+++++++
T Consensus       244 p~~Rp~~~~i~~  255 (260)
T cd05069         244 PDERPTFEYIQS  255 (260)
T ss_pred             cccCcCHHHHHH
Confidence            999999998863

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.86  E-value=6.5e-22  Score=169.18  Aligned_cols=133  Identities=18%  Similarity=0.171  Sum_probs=94.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++...........+|++|||++......       ...+++..|+|||.+.....++.++||||+||++
T Consensus       127 vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l  199 (262)
T cd05077         127 VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTL  199 (262)
T ss_pred             ECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-------ccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence            699999999999732111112234899999998765322       2346788999999886556689999999999999


Q ss_pred             HHHh-hCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMI-SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell-~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|+ .|..||.+....+........                       .         ......+.++.+||.+||+.|
T Consensus       200 ~el~~~~~~p~~~~~~~~~~~~~~~~-----------------------~---------~~~~~~~~~~~~li~~cl~~d  247 (262)
T cd05077         200 WEICYNGEIPLKDKTLAEKERFYEGQ-----------------------C---------MLVTPSCKELADLMTHCMNYD  247 (262)
T ss_pred             HHHHhCCCCCCCCcchhHHHHHHhcC-----------------------c---------cCCCCChHHHHHHHHHHcCCC
Confidence            9998 578888765432221111000                       0         001123467899999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+||++.+++++
T Consensus       248 p~~Rp~~~~il~~  260 (262)
T cd05077         248 PNQRPFFRAIMRD  260 (262)
T ss_pred             hhhCcCHHHHHHh
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.86  E-value=6e-22  Score=169.72  Aligned_cols=131  Identities=16%  Similarity=0.150  Sum_probs=98.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+|++|||.+..........  .....++..|+|||++.+ ..++.++||||+||++
T Consensus       129 iH~dikp~nili~-------~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  198 (266)
T cd05064         129 VHKGLAAHKVLVN-------SDLVCKISGFRRLQEDKSEAIYT--TMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVM  198 (266)
T ss_pred             eeccccHhhEEEc-------CCCcEEECCCcccccccccchhc--ccCCCCceeecCHHHHhh-CCccchhHHHHHHHHH
Confidence            6999999999998       88999999999876543221111  112345678999999865 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+++ |..||.+.+..+.+..+......+.                              ....+..+.+++.+||..+
T Consensus       199 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~li~~c~~~~  248 (266)
T cd05064         199 WEVMSYGERPYWDMSGQDVIKAVEDGFRLPA------------------------------PRNCPNLLHQLMLDCWQKE  248 (266)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHHHCCCCCCC------------------------------CCCCCHHHHHHHHHHcCCC
Confidence            99775 9999988776655554432211111                              1245678999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       249 p~~RP~~~~i~~  260 (266)
T cd05064         249 RGERPRFSQIHS  260 (266)
T ss_pred             chhCCCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.86  E-value=7.3e-22  Score=168.25  Aligned_cols=133  Identities=15%  Similarity=0.221  Sum_probs=100.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||.++.........  .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       121 i~H~dl~p~nili~-------~~~~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~  190 (256)
T cd05113         121 FIHRDLAARNCLVD-------DQGCVKVSDFGLSRYVLDDEYTS--SVGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVL  190 (256)
T ss_pred             eeccccCcceEEEc-------CCCCEEECCCccceecCCCceee--cCCCccChhhCCHHHHhc-CcccchhHHHHHHHH
Confidence            36999999999998       88999999999998654322111  112245678999999864 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||...+..+....+......+                              .....+..+.+++.+||..
T Consensus       191 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~cl~~  240 (256)
T cd05113         191 MWEVYSLGKMPYERFNNSETVEKVSQGLRLY------------------------------RPHLASEKVYAIMYSCWHE  240 (256)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC------------------------------CCCCCCHHHHHHHHHHcCC
Confidence            999998 999997766555444443221110                              0112468899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      +|.+|||+.+++.+
T Consensus       241 ~p~~Rp~~~~ll~~  254 (256)
T cd05113         241 KAEERPTFQQLLSS  254 (256)
T ss_pred             CcccCCCHHHHHHh
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.86  E-value=6.8e-22  Score=172.68  Aligned_cols=134  Identities=19%  Similarity=0.241  Sum_probs=101.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......... ......++..|+|||++.+ ..++.++||||+||+
T Consensus       158 ivH~dlkp~Nili~-------~~~~~kl~D~g~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~  228 (304)
T cd05101         158 CIHRDLAARNVLVT-------ENNVMKIADFGLARDVNNIDYYK-KTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVL  228 (304)
T ss_pred             eeecccccceEEEc-------CCCcEEECCCccceecccccccc-cccCCCCCceeeCchhhcc-CCCCchhhHHHHHHH
Confidence            37999999999998       88999999999998764322111 1223355678999999865 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++++ |..+|.+.+..+....+......                              ......+..+.+|+.+||..
T Consensus       229 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~  278 (304)
T cd05101         229 MWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------------------------DKPANCTNELYMMMRDCWHA  278 (304)
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHcCCcC------------------------------CCCCCCCHHHHHHHHHHccc
Confidence            999998 78889877655544443211000                              01124578999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      +|.+|||+.++++.
T Consensus       279 ~p~~Rps~~e~l~~  292 (304)
T cd05101         279 IPSHRPTFKQLVED  292 (304)
T ss_pred             ChhhCCCHHHHHHH
Confidence            99999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=6.9e-22  Score=168.75  Aligned_cols=131  Identities=22%  Similarity=0.331  Sum_probs=98.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.........  .....++..|+|||++.+ ..++.++|+||+||++
T Consensus       125 ~H~dl~p~Nil~~-------~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  194 (261)
T cd05068         125 IHRDLAARNVLVG-------ENNICKVADFGLARVIKEDIYEA--REGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILL  194 (261)
T ss_pred             eeccCCcceEEEc-------CCCCEEECCcceEEEccCCcccc--cCCCcCceeccCcccccc-CCCCchhhHHHHHHHH
Confidence            6999999999999       88999999999998765321111  111223457999998764 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+....+..+......+.                              ....+..+.+++.+||..+
T Consensus       195 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~li~~~l~~~  244 (261)
T cd05068         195 TEIVTYGRMPYPGMTNAEVLQQVDQGYRMPC------------------------------PPGCPKELYDIMLDCWKED  244 (261)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------CCcCCHHHHHHHHHHhhcC
Confidence            99999 9999988776555544432111110                              1235688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||++.++++
T Consensus       245 P~~Rp~~~~l~~  256 (261)
T cd05068         245 PDDRPTFETLQW  256 (261)
T ss_pred             cccCCCHHHHHH
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.86  E-value=1.3e-21  Score=171.64  Aligned_cols=132  Identities=19%  Similarity=0.250  Sum_probs=98.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||++.+ ..++.++||||+||++
T Consensus       156 ~H~dlkp~Nill~-------~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l  226 (314)
T cd05099         156 IHRDLAARNVLVT-------EDNVMKIADFGLARGVHDIDYYKK-TSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILM  226 (314)
T ss_pred             eeccccceeEEEc-------CCCcEEEccccccccccccccccc-cccCCCCccccCHHHHcc-CCcCccchhhHHHHHH
Confidence            6999999999998       889999999999986543211110 112234467999999865 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++ |..||.+....+.+..+.....                              .......+.++.+++.+||..+
T Consensus       227 ~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~cl~~~  276 (314)
T cd05099         227 WEIFTLGGSPYPGIPVEELFKLLREGHR------------------------------MDKPSNCTHELYMLMRECWHAV  276 (314)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCC------------------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence            99998 8899988766555544332100                              0011245678999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       277 p~~Rps~~~ll~  288 (314)
T cd05099         277 PTQRPTFKQLVE  288 (314)
T ss_pred             cccCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.86  E-value=8.9e-22  Score=166.99  Aligned_cols=132  Identities=20%  Similarity=0.265  Sum_probs=97.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       115 ~h~di~p~nili~-------~~~~~~l~d~g~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i~  185 (251)
T cd05041         115 IHRDLAARNCLVG-------ENNVLKISDFGMSREEEGGIYTVS-DGLKQIPIKWTAPEALNY-GRYTSESDVWSYGILL  185 (251)
T ss_pred             ehhhcCcceEEEc-------CCCcEEEeeccccccccCCcceec-cccCcceeccCChHhhcc-CCCCcchhHHHHHHHH
Confidence            6999999999999       889999999999986542211100 112234567999998865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.........+....+.+                              .....+..+.+++.+||..+
T Consensus       186 ~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~  235 (251)
T cd05041         186 WETFSLGDTPYPGMSNQQTRERIESGYRMP------------------------------APQLCPEEIYRLMLQCWAYD  235 (251)
T ss_pred             HHHHhccCCCCccCCHHHHHHHHhcCCCCC------------------------------CCccCCHHHHHHHHHHhccC
Confidence            99998 888897766544333332111100                              01235688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       236 p~~Rp~~~ell~  247 (251)
T cd05041         236 PENRPSFSEIYN  247 (251)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.86  E-value=1.9e-21  Score=165.51  Aligned_cols=135  Identities=19%  Similarity=0.224  Sum_probs=101.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++................++..|+|||.+.+ ..++.++||||+||+
T Consensus       118 i~H~di~p~nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~  189 (257)
T cd05040         118 FIHRDLAARNILLA-------SDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWMFGVT  189 (257)
T ss_pred             ccccccCcccEEEe-------cCCEEEeccccccccccccccceecccCCCCCceecCHHHhcc-cCcCchhhhHHHHHH
Confidence            37999999999999       8899999999999876543221111123456788999998754 558999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+.+..+....+......                        ..     .....+..+.+++.+||..
T Consensus       190 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------------------~~-----~~~~~~~~~~~li~~~l~~  240 (257)
T cd05040         190 LWEMFTYGEEPWAGLSGSQILKKIDKEGER------------------------LE-----RPEACPQDIYNVMLQCWAH  240 (257)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCc------------------------CC-----CCccCCHHHHHHHHHHCCC
Confidence            999998 99999877665544444321000                        00     0123467899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|++|||+.++++
T Consensus       241 ~p~~Rps~~~~~~  253 (257)
T cd05040         241 NPADRPTFAALRE  253 (257)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.86  E-value=1.9e-21  Score=169.12  Aligned_cols=139  Identities=14%  Similarity=0.161  Sum_probs=99.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++....... ........+|..|+|||.+.+ ..++.++||||+||++
T Consensus       152 ~H~dlkp~Nili~-------~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l  222 (296)
T cd05051         152 VHRDLATRNCLVG-------KNYTIKIADFGMSRNLYSSDY-YRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTL  222 (296)
T ss_pred             cccccchhceeec-------CCCceEEccccceeecccCcc-eeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHH
Confidence            6999999999999       889999999999986533211 111233456788999999865 4589999999999999


Q ss_pred             HHHhh--CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMIS--NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~--g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      |||++  |..||...+....+..+........                       ........+..+.++.+++.+||+.
T Consensus       223 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~li~~cl~~  279 (296)
T cd05051         223 WEILTLCREQPYEHLTDQQVIENAGHFFRDDG-----------------------RQIYLPRPPNCPKDIYELMLECWRR  279 (296)
T ss_pred             HHHHhcCCCCCCCCcChHHHHHHHHhcccccc-----------------------ccccCCCccCCCHHHHHHHHHHhcc
Confidence            99998  6678876655544444332211000                       0000011234568999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||.+|||+.++++
T Consensus       280 ~p~~Rpt~~el~~  292 (296)
T cd05051         280 DEEDRPTFREIHL  292 (296)
T ss_pred             ChhcCCCHHHHHH
Confidence            9999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.86  E-value=1.2e-21  Score=166.34  Aligned_cols=139  Identities=24%  Similarity=0.373  Sum_probs=104.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||+|+||+++       .++.+||+|||.+......... .......++..|+|||.+.+ ..++.++|+||+||+
T Consensus       122 ~~h~dl~p~ni~i~-------~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~i  192 (260)
T cd06606         122 IVHRDIKGANILVD-------SDGVVKLADFGCAKRLGDIETG-EGTGSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCT  192 (260)
T ss_pred             ccccCCCHHHEEEc-------CCCCEEEcccccEEeccccccc-ccccCCCCCccccCHhhhcC-CCCCchhhHHHHHHH
Confidence            37999999999999       7899999999999877554321 01234578889999998764 448999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+...  ....+.....                          ...........+..+.+++.+||..|
T Consensus       193 l~~l~~g~~p~~~~~~--~~~~~~~~~~--------------------------~~~~~~~~~~~~~~l~~~i~~~l~~~  244 (260)
T cd06606         193 VIEMATGKPPWSELGN--PMAALYKIGS--------------------------SGEPPEIPEHLSEEAKDFLRKCLRRD  244 (260)
T ss_pred             HHHHHhCCCCCCCCCc--hHHHHHhccc--------------------------cCCCcCCCcccCHHHHHHHHHhCcCC
Confidence            9999999999977651  1111111110                          00001112245789999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |.+||++.++++||||
T Consensus       245 p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         245 PKKRPTADELLQHPFL  260 (260)
T ss_pred             hhhCCCHHHHhhCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.86  E-value=1.3e-21  Score=173.29  Aligned_cols=134  Identities=19%  Similarity=0.245  Sum_probs=100.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......... ......++..|+|||++.+ ..++.++||||+||+
T Consensus       155 ivH~dlkp~Nill~-------~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  225 (334)
T cd05100         155 CIHRDLAARNVLVT-------EDNVMKIADFGLARDVHNIDYYK-KTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVL  225 (334)
T ss_pred             eeccccccceEEEc-------CCCcEEECCcccceecccccccc-cccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHH
Confidence            37999999999998       88999999999998654321111 1122344567999999864 558999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||++ |..||.+.+..+....+......                              ......+..+.+++.+||..
T Consensus       226 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~  275 (334)
T cd05100         226 LWEIFTLGGSPYPGIPVEELFKLLKEGHRM------------------------------DKPANCTHELYMIMRECWHA  275 (334)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCCCCHHHHHHHHHHccc
Confidence            999998 88999887765554443321100                              01124568899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      +|.+|||+.+++++
T Consensus       276 ~p~~Rps~~ell~~  289 (334)
T cd05100         276 VPSQRPTFKQLVED  289 (334)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.86  E-value=8.6e-22  Score=172.32  Aligned_cols=134  Identities=19%  Similarity=0.238  Sum_probs=98.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......... ......++..|+|||++.+ ..++.++|+||+||+
T Consensus       161 i~H~dlkp~Nill~-------~~~~~kL~dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~  231 (307)
T cd05098         161 CIHRDLAARNVLVT-------EDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVL  231 (307)
T ss_pred             cccccccHHheEEc-------CCCcEEECCCcccccccccchhh-ccccCCCccceeChHHhcc-CCCCcHHHHHHHHHH
Confidence            36999999999999       88999999999998654221111 0112234568999999865 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|+|++ |..||.+....+....+.....                              .......+.++.+|+.+||..
T Consensus       232 l~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~  281 (307)
T cd05098         232 LWEIFTLGGSPYPGVPVEELFKLLKEGHR------------------------------MDKPSNCTNELYMMMRDCWHA  281 (307)
T ss_pred             HHHHHcCCCCCCCcCCHHHHHHHHHcCCC------------------------------CCCCCcCCHHHHHHHHHHccc
Confidence            999998 8889977665443333221100                              011124578999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      +|.+|||+.+++++
T Consensus       282 ~p~~Rps~~evl~~  295 (307)
T cd05098         282 VPSQRPTFKQLVED  295 (307)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.86  E-value=1.2e-21  Score=167.24  Aligned_cols=132  Identities=21%  Similarity=0.295  Sum_probs=100.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.++|+|||++..........  .....++..|+|||++.+ ..++.++|+||+||+
T Consensus       123 i~H~dl~p~ni~i~-------~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~  192 (260)
T cd05067         123 YIHRDLRAANILVS-------ETLCCKIADFGLARLIEDNEYTA--REGAKFPIKWTAPEAINY-GTFTIKSDVWSFGIL  192 (260)
T ss_pred             eecccccHHhEEEc-------CCCCEEEccCcceeecCCCCccc--ccCCcccccccCHHHhcc-CCcCcccchHHHHHH
Confidence            37999999999999       88999999999998764221111  123345678999998764 458899999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++++ |+.||.+.+..+....+......+                              .....+.++.+++.+||..
T Consensus       193 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~  242 (260)
T cd05067         193 LTEIVTYGRIPYPGMTNPEVIQNLERGYRMP------------------------------RPDNCPEELYELMRLCWKE  242 (260)
T ss_pred             HHHHHhCCCCCCCCCChHHHHHHHHcCCCCC------------------------------CCCCCCHHHHHHHHHHccC
Confidence            999998 999998877655544443221111                              0123567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|++|||++++++
T Consensus       243 ~p~~Rp~~~~l~~  255 (260)
T cd05067         243 KPEERPTFEYLRS  255 (260)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.86  E-value=2.4e-21  Score=165.34  Aligned_cols=130  Identities=18%  Similarity=0.305  Sum_probs=100.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.........   .....++..|+|||++.+ ..++.++|+||+||++
T Consensus       126 ~h~dl~~~nilv~-------~~~~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l  194 (261)
T cd05148         126 IHRDLAARNILVG-------EDLVCKVADFGLARLIKEDVYL---SSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILL  194 (261)
T ss_pred             eccccCcceEEEc-------CCceEEEccccchhhcCCcccc---ccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999999876432111   123345678999999864 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+.+..+......+                              .....++.+.+++.+||+.|
T Consensus       195 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~  244 (261)
T cd05148         195 YEMFTYGQVPYPGMNNHEVYDQITAGYRMP------------------------------CPAKCPQEIYKIMLECWAAE  244 (261)
T ss_pred             HHHHcCCCCCCCcCCHHHHHHHHHhCCcCC------------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            99998 899998877655555543211111                              01245788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       245 p~~Rpt~~~l~~  256 (261)
T cd05148         245 PEDRPSFKALRE  256 (261)
T ss_pred             chhCcCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.86  E-value=7e-22  Score=172.58  Aligned_cols=131  Identities=21%  Similarity=0.234  Sum_probs=97.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......    .....++..|+|||++.+ ..++.++||||+||+
T Consensus       145 i~H~dlkp~Nili~-------~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  212 (303)
T cd05088         145 FIHRDLAARNILVG-------ENYVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVL  212 (303)
T ss_pred             ccccccchheEEec-------CCCcEEeCccccCcccchhhh----cccCCCcccccCHHHHhc-cCCcccccchhhhhH
Confidence            37999999999999       889999999999874321110    111233567999998754 558999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+.+..+....+.....                         ..     .....+.++.+|+.+||+.
T Consensus       213 l~ellt~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~-----~~~~~~~~~~~li~~~l~~  262 (303)
T cd05088         213 LWEIVSLGGTPYCGMTCAELYEKLPQGYR-------------------------LE-----KPLNCDDEVYDLMRQCWRE  262 (303)
T ss_pred             HHHHHhcCCCCcccCChHHHHHHHhcCCc-------------------------CC-----CCCCCCHHHHHHHHHHcCC
Confidence            999998 9999987765444333211000                         00     0113568899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      +|++||++++++++
T Consensus       263 ~p~~Rp~~~~il~~  276 (303)
T cd05088         263 KPYERPSFAQILVS  276 (303)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999865

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.86  E-value=1.8e-21  Score=168.65  Aligned_cols=132  Identities=17%  Similarity=0.192  Sum_probs=97.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.......... .....++..|+|||++.+ ..++.++|+||+||++
T Consensus       152 ~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il  222 (288)
T cd05050         152 VHRDLATRNCLVG-------ENMVVKIADFGLSRNIYSADYYKA-SENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVL  222 (288)
T ss_pred             ecccccHhheEec-------CCCceEECccccceecccCccccc-cCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHH
Confidence            7999999999998       889999999999986543211110 122344667999998865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.+..+....+......                              ......+.++.+||.+||+.+
T Consensus       223 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~~  272 (288)
T cd05050         223 WEIFSYGMQPYYGMAHEEVIYYVRDGNVL------------------------------SCPDNCPLELYNLMRLCWSKL  272 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhcCCCC------------------------------CCCCCCCHHHHHHHHHHcccC
Confidence            99997 88888776655544433211000                              011245688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.|+++
T Consensus       273 p~~Rpt~~el~~  284 (288)
T cd05050         273 PSDRPSFASINR  284 (288)
T ss_pred             cccCCCHHHHHH
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.86  E-value=2.3e-21  Score=166.27  Aligned_cols=137  Identities=19%  Similarity=0.223  Sum_probs=96.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC------CCCCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN------SKGYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~~~~DiW   79 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||++..      ...++.++|||
T Consensus       122 vH~dlkp~Nill~-------~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  193 (269)
T cd05042         122 IHSDLALRNCQLT-------ADLSVKIGDYGLALEQYPEDYYIT-KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIW  193 (269)
T ss_pred             ecccccHhheEec-------CCCcEEEeccccccccccchheec-cCCCCCcccccCHHHHhhccccccccccchhhHHH
Confidence            6999999999999       889999999999875432211111 122355678999998742      23468899999


Q ss_pred             HHHHHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHH
Q psy7274          80 SVGCILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLG  158 (308)
Q Consensus        80 SlG~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  158 (308)
                      |+||+++||++ |..||......+.+..+........                         +........+....+++.
T Consensus       194 slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~  248 (269)
T cd05042         194 SLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKL-------------------------PKPQLDLKYSDRWYEVMQ  248 (269)
T ss_pred             HHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccC-------------------------CCCcccccCCHHHHHHHH
Confidence            99999999999 7788877765555444432211100                         001112345778889999


Q ss_pred             HhcccCCCCCCCHHHHhc
Q psy7274         159 KMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       159 ~~L~~dP~~R~t~~eil~  176 (308)
                      .|+ .||++|||++++++
T Consensus       249 ~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         249 FCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHh-cCcccccCHHHHHH
Confidence            998 59999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.85  E-value=1.6e-21  Score=165.50  Aligned_cols=132  Identities=17%  Similarity=0.197  Sum_probs=94.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++...... .........++..|+|||.+.+ ..++.++|+||+||++
T Consensus       116 ~H~dl~p~nil~~-------~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il  186 (252)
T cd05084         116 IHRDLAARNCLVT-------EKNVLKISDFGMSREEEDGV-YASTGGMKQIPVKWTAPEALNY-GRYSSESDVWSFGILL  186 (252)
T ss_pred             cccccchheEEEc-------CCCcEEECccccCccccccc-ccccCCCCCCceeecCchhhcC-CCCChHHHHHHHHHHH
Confidence            7999999999999       88999999999988643221 1100111123456999998764 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||...........+......                              ......+..+.+|+.+||+.+
T Consensus       187 ~e~~~~~~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~  236 (252)
T cd05084         187 WEAFSLGAVPYANLSNQQTREAIEQGVRL------------------------------PCPELCPDAVYRLMERCWEYD  236 (252)
T ss_pred             HHHHhCCCCCccccCHHHHHHHHHcCCCC------------------------------CCcccCCHHHHHHHHHHcCCC
Confidence            99997 88888665543333222211000                              011234688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       237 p~~Rps~~~~~~  248 (252)
T cd05084         237 PGQRPSFSTVHQ  248 (252)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.85  E-value=1.1e-21  Score=168.50  Aligned_cols=130  Identities=22%  Similarity=0.226  Sum_probs=96.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......    ......+..|+|||++.+ ..++.++|+||+||+
T Consensus       133 i~H~dikp~nili~-------~~~~~kl~dfgl~~~~~~~~~----~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~i  200 (270)
T cd05047         133 FIHRDLAARNILVG-------ENYVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVL  200 (270)
T ss_pred             EeecccccceEEEc-------CCCeEEECCCCCccccchhhh----ccCCCCccccCChHHHcc-CCCCchhhHHHHHHH
Confidence            36999999999999       889999999999864322110    111233567999998754 558999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||++ |..||.+.+..+....+.....                         .     ......+.++.+++.+||..
T Consensus       201 l~el~~~g~~pf~~~~~~~~~~~~~~~~~-------------------------~-----~~~~~~~~~~~~li~~~l~~  250 (270)
T cd05047         201 LWEIVSLGGTPYCGMTCAELYEKLPQGYR-------------------------L-----EKPLNCDDEVYDLMRQCWRE  250 (270)
T ss_pred             HHHHHcCCCCCccccCHHHHHHHHhCCCC-------------------------C-----CCCCcCCHHHHHHHHHHccc
Confidence            999997 9999987665444433321100                         0     01123567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||.+|||+++++.
T Consensus       251 ~p~~Rps~~~il~  263 (270)
T cd05047         251 KPYERPSFAQILV  263 (270)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.85  E-value=1.4e-21  Score=167.29  Aligned_cols=133  Identities=16%  Similarity=0.229  Sum_probs=99.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       128 ~H~di~p~nili~-------~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l  198 (266)
T cd05033         128 VHRDLAARNILVN-------SNLVCKVSDFGLSRRLEDSEATYT-TKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVM  198 (266)
T ss_pred             ccCCCCcceEEEc-------CCCCEEECccchhhccccccccee-ccCCCCCccccChhhhcc-CCCccccchHHHHHHH
Confidence            7999999999999       889999999999997752111110 112244678999998764 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||......+....+......+.                              ....+..+.+++.+||+.+
T Consensus       199 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~l~~li~~cl~~~  248 (266)
T cd05033         199 WEVMSYGERPYWDMSNQDVIKAVEDGYRLPP------------------------------PMDCPSALYQLMLDCWQKD  248 (266)
T ss_pred             HHHHccCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------CCCCCHHHHHHHHHHcCCC
Confidence            99997 9999876655544443332111110                              1235688999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++||++++++++
T Consensus       249 p~~Rp~~~ei~~~  261 (266)
T cd05033         249 RNERPTFSQIVST  261 (266)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.85  E-value=1.3e-21  Score=168.71  Aligned_cols=132  Identities=17%  Similarity=0.215  Sum_probs=98.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.+........ .....++..|+|||++.+ ..++.++||||+||++
T Consensus       139 ~H~di~p~nil~~-------~~~~~kl~d~g~~~~~~~~~~~~~-~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l  209 (280)
T cd05043         139 IHKDIAARNCVID-------EELQVKITDNALSRDLFPMDYHCL-GDNENRPVKWMALESLVN-KEYSSASDVWSFGVLL  209 (280)
T ss_pred             eecccCHhhEEEc-------CCCcEEECCCCCcccccCCceEEe-CCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHH
Confidence            6999999999998       889999999999986543221110 122345678999999865 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |+.||.+.+..+....+......                           .   .....++++.+++.+||..|
T Consensus       210 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~---~~~~~~~~~~~li~~~l~~~  259 (280)
T cd05043         210 WELMTLGQTPYVEIDPFEMAAYLKDGYRL---------------------------A---QPINCPDELFAVMACCWALD  259 (280)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHHHcCCCC---------------------------C---CCCcCCHHHHHHHHHHcCCC
Confidence            99998 99999876654433322211000                           0   01234678999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       260 p~~Rps~~~~~~  271 (280)
T cd05043         260 PEERPSFSQLVQ  271 (280)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999873

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.85  E-value=1.7e-21  Score=165.70  Aligned_cols=133  Identities=17%  Similarity=0.244  Sum_probs=98.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.........  .....++..|+|||.+.+ ..++.++|+||+||+
T Consensus       121 i~h~dl~p~ni~i~-------~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~  190 (256)
T cd05112         121 VIHRDLAARNCLVG-------ENQVVKVSDFGMTRFVLDDQYTS--STGTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVL  190 (256)
T ss_pred             ccccccccceEEEc-------CCCeEEECCCcceeecccCcccc--cCCCccchhhcCHhHhcc-CCcChHHHHHHHHHH
Confidence            36999999999998       88999999999998654321111  122345678999998864 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||........+..+.......                              .....+..+.+|+.+||..
T Consensus       191 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~  240 (256)
T cd05112         191 MWEVFSEGKTPYENRSNSEVVETINAGFRLY------------------------------KPRLASQSVYELMQHCWKE  240 (256)
T ss_pred             HHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC------------------------------CCCCCCHHHHHHHHHHccc
Confidence            999998 899998766554444332110000                              0012468899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      +|++|||+.+++++
T Consensus       241 ~p~~Rp~~~~~l~~  254 (256)
T cd05112         241 RPEDRPSFSLLLHQ  254 (256)
T ss_pred             ChhhCCCHHHHHHh
Confidence            99999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.85  E-value=3.4e-21  Score=163.27  Aligned_cols=132  Identities=17%  Similarity=0.238  Sum_probs=98.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.........  .....++..|+|||++.+ ..++.++|+||+||+
T Consensus       114 ~~H~dl~p~nili~-------~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~l  183 (250)
T cd05085         114 CIHRDLAARNCLVG-------ENNVLKISDFGMSRQEDDGIYSS--SGLKQIPIKWTAPEALNY-GRYSSESDVWSYGIL  183 (250)
T ss_pred             eeecccChheEEEc-------CCCeEEECCCccceecccccccc--CCCCCCcccccCHHHhcc-CCCCchhHHHHHHHH
Confidence            36999999999999       88999999999997643321111  112234567999999854 458899999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++++ |..||.+.........+.....                         .     ......+..+.+++.+||..
T Consensus       184 l~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~-----~~~~~~~~~~~~li~~~l~~  233 (250)
T cd05085         184 LWETFSLGVCPYPGMTNQQAREQVEKGYR-------------------------M-----SCPQKCPDDVYKVMQRCWDY  233 (250)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHcCCC-------------------------C-----CCCCCCCHHHHHHHHHHccc
Confidence            999998 9999987765443333321100                         0     01124578999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|.+|||+.++++
T Consensus       234 ~p~~Rp~~~~l~~  246 (250)
T cd05085         234 KPENRPKFSELQK  246 (250)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.85  E-value=2.2e-21  Score=166.28  Aligned_cols=133  Identities=18%  Similarity=0.244  Sum_probs=99.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................++..|+|||.+.+ ..++.++|+||+||++
T Consensus       128 ~h~dlkp~nili~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l  199 (267)
T cd05066         128 VHRDLAARNILVN-------SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVM  199 (267)
T ss_pred             eehhhchhcEEEC-------CCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHH
Confidence            6999999999998       8899999999999876543211111122233567999999864 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |..||.+....+....+......+.                              ....++.+.+++.+||+.+
T Consensus       200 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~li~~~l~~~  249 (267)
T cd05066         200 WEVMSYGERPYWEMSNQDVIKAIEEGYRLPA------------------------------PMDCPAALHQLMLDCWQKD  249 (267)
T ss_pred             HHHhcCCCCCcccCCHHHHHHHHhCCCcCCC------------------------------CCCCCHHHHHHHHHHcccC
Confidence            99886 9999987665554444432211110                              1235688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||++.++++
T Consensus       250 p~~Rp~~~~i~~  261 (267)
T cd05066         250 RNERPKFEQIVS  261 (267)
T ss_pred             chhCCCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=2.9e-21  Score=164.78  Aligned_cols=130  Identities=24%  Similarity=0.342  Sum_probs=99.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++..........  .....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       125 ~h~di~p~nili~-------~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il  194 (261)
T cd05034         125 IHRDLAARNILVG-------ENLVCKIADFGLARLIEDDEYTA--REGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILL  194 (261)
T ss_pred             ccCCcchheEEEc-------CCCCEEECccccceeccchhhhh--hhccCCCccccCHHHhcc-CCcCchhHHHHHHHHH
Confidence            6999999999999       88999999999998764321110  112234568999998864 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |+.||.+.+....+..+......+.                              ....+..+.+++.+||..+
T Consensus       195 ~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~i~~~l~~~  244 (261)
T cd05034         195 TEIVTYGRVPYPGMTNREVLEQVERGYRMPR------------------------------PPNCPEELYDLMLQCWDKD  244 (261)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------CCCCCHHHHHHHHHHcccC
Confidence            99998 9999988776666655543221111                              1234678999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |.+||++++++
T Consensus       245 p~~Rp~~~~l~  255 (261)
T cd05034         245 PEERPTFEYLQ  255 (261)
T ss_pred             cccCCCHHHHH
Confidence            99999999886

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.85  E-value=2.9e-21  Score=168.61  Aligned_cols=133  Identities=23%  Similarity=0.312  Sum_probs=98.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......++..|+|||.+.+ ..++.++||||+||++
T Consensus       163 vH~dlkp~Nil~~-------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil  233 (302)
T cd05055         163 IHRDLAARNVLLT-------HGKIVKICDFGLARDIMNDSNY-VVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILL  233 (302)
T ss_pred             ehhhhccceEEEc-------CCCeEEECCCcccccccCCCce-eecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHH
Confidence            6999999999998       8889999999999865432211 11122356778999998865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+....+.+...... +.+                       .     ......+..+.+++.+||..+
T Consensus       234 ~el~t~g~~p~~~~~~~~~~~~~~~~-~~~-----------------------~-----~~~~~~~~~~~~li~~cl~~~  284 (302)
T cd05055         234 WEIFSLGSNPYPGMPVDSKFYKLIKE-GYR-----------------------M-----AQPEHAPAEIYDIMKTCWDAD  284 (302)
T ss_pred             HHHHhCCCCCcCCCCchHHHHHHHHc-CCc-----------------------C-----CCCCCCCHHHHHHHHHHcCCC
Confidence            99998 99999876544333222210 000                       0     001235788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       285 p~~Rpt~~ell~  296 (302)
T cd05055         285 PLKRPTFKQIVQ  296 (302)
T ss_pred             chhCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.85  E-value=3.1e-21  Score=165.54  Aligned_cols=132  Identities=23%  Similarity=0.327  Sum_probs=99.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.........  .+...++..|+|||.+.+ ..++.++|+||+||+
T Consensus       128 ~~H~dl~p~nili~-------~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  197 (270)
T cd05056         128 FVHRDIAARNVLVS-------SPDCVKLGDFGLSRYLEDESYYK--ASKGKLPIKWMAPESINF-RRFTSASDVWMFGVC  197 (270)
T ss_pred             eeccccChheEEEe-------cCCCeEEccCceeeeccccccee--cCCCCccccccChhhhcc-CCCCchhhhHHHHHH
Confidence            36999999999999       88999999999998664332111  122234568999998754 568999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++++ |..||.+.+..+.+..+......                              ...+..+..+.+++.+|+..
T Consensus       198 l~el~~~g~~pf~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~  247 (270)
T cd05056         198 MWEILMLGVKPFQGVKNNDVIGRIENGERL------------------------------PMPPNCPPTLYSLMTKCWAY  247 (270)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHcCCcC------------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            999986 99999887766555443221100                              01234578999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|.+|||+.+++.
T Consensus       248 ~P~~Rpt~~~~~~  260 (270)
T cd05056         248 DPSKRPRFTELKA  260 (270)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.85  E-value=2.4e-21  Score=165.25  Aligned_cols=134  Identities=16%  Similarity=0.185  Sum_probs=94.0

Q ss_pred             CCCCCCCCCCcccCccccc-cCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQ-YYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~-~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++..... .+..+.+|++|||++......       ....++..|+|||++.+...++.++|+||+||
T Consensus       121 iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  193 (258)
T cd05078         121 LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK-------EILLERIPWVPPECIENPQNLSLAADKWSFGT  193 (258)
T ss_pred             eecCCCccceEEEecccccccCCCceEEecccccccccCCc-------hhccccCCccCchhccCCCCCCchhhHHHHHH
Confidence            3799999999999821111 012233799999998765321       23467889999999876556899999999999


Q ss_pred             HHHHHhhCC-CCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g~-~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++|+|++|. .+|...+..........                        ..        .+....+.++.+|+.+||+
T Consensus       194 ~l~~l~~g~~~~~~~~~~~~~~~~~~~------------------------~~--------~~~~~~~~~~~~li~~~l~  241 (258)
T cd05078         194 TLWEIFSGGDKPLSALDSQKKLQFYED------------------------RH--------QLPAPKWTELANLINQCMD  241 (258)
T ss_pred             HHHHHHcCCCCChhhccHHHHHHHHHc------------------------cc--------cCCCCCcHHHHHHHHHHhc
Confidence            999999985 66655443322211100                        00        0112345789999999999


Q ss_pred             cCCCCCCCHHHHhcC
Q psy7274         163 FNPHKRIGVEDALAH  177 (308)
Q Consensus       163 ~dP~~R~t~~eil~h  177 (308)
                      .||++|||++++++.
T Consensus       242 ~~p~~Rps~~~il~~  256 (258)
T cd05078         242 YEPDFRPSFRAIIRD  256 (258)
T ss_pred             cChhhCCCHHHHHHh
Confidence            999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.85  E-value=4.6e-21  Score=166.74  Aligned_cols=139  Identities=15%  Similarity=0.166  Sum_probs=98.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........ ........++..|+|||++.+ ..++.++|+||+||++
T Consensus       151 ~H~dlkp~Nill~-------~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l  221 (295)
T cd05097         151 VHRDLATRNCLVG-------NHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTL  221 (295)
T ss_pred             eccccChhhEEEc-------CCCcEEecccccccccccCcc-eeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHH
Confidence            6999999999998       888999999999986533211 111223355778999998865 4589999999999999


Q ss_pred             HHHhh--CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMIS--NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~--g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|++  |..||...+..+.+..+.......                    .   ........+..++.+.+|+.+||..
T Consensus       222 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------------------~---~~~~~~~~~~~~~~l~~li~~~l~~  278 (295)
T cd05097         222 WEMFTLCKEQPYSLLSDEQVIENTGEFFRNQ--------------------G---RQIYLSQTPLCPSPVFKLMMRCWSR  278 (295)
T ss_pred             HHHHHcCCCCCCcccChHHHHHHHHHhhhhc--------------------c---ccccCCCCCCCCHHHHHHHHHHcCC
Confidence            99988  567887766554444332211000                    0   0000011223568899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||.+|||++++++
T Consensus       279 ~p~~RPs~~~i~~  291 (295)
T cd05097         279 DIKDRPTFNKIHH  291 (295)
T ss_pred             CchhCcCHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.85  E-value=4e-21  Score=164.67  Aligned_cols=132  Identities=20%  Similarity=0.284  Sum_probs=97.6

Q ss_pred             CCCCCCCCCcccCccccccCCCC-----CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA-----DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~-----~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWS   80 (308)
                      .|+||||+||+++       .++     .+||+|||+++........ .......++..|+|||++.+ ..++.++||||
T Consensus       128 ~H~dl~p~nil~~-------~~~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s  198 (269)
T cd05044         128 IHRDLAARNCLVS-------EKGYDADRVVKIGDFGLARDIYKSDYY-RKEGEGLLPVRWMAPESLLD-GKFTTQSDVWS  198 (269)
T ss_pred             ccCCCChheEEEe-------cCCCCCCcceEECCccccccccccccc-ccCcccCCCccccCHHHHcc-CCcccchhHHH
Confidence            6999999999998       555     8999999999865432111 11122355678999999865 45899999999


Q ss_pred             HHHHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          81 VGCILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        81 lG~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      +||++++|++ |..||...+..+....+..... +                             ......+..+.++|.+
T Consensus       199 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~-----------------------------~~~~~~~~~~~~li~~  248 (269)
T cd05044         199 FGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR-L-----------------------------QKPENCPDKIYQLMTN  248 (269)
T ss_pred             HHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc-c-----------------------------CCcccchHHHHHHHHH
Confidence            9999999998 9999987766554443321100 0                             0112456889999999


Q ss_pred             hcccCCCCCCCHHHHhc
Q psy7274         160 MLTFNPHKRIGVEDALA  176 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~  176 (308)
                      ||..+|.+||++.++++
T Consensus       249 ~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         249 CWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HcCCCcccCCCHHHHHH
Confidence            99999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.85  E-value=4.1e-21  Score=163.29  Aligned_cols=127  Identities=20%  Similarity=0.290  Sum_probs=96.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++......      .....+..|+|||.+.+ ..++.++|+||+||++
T Consensus       122 ~H~dl~p~nili~-------~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l  187 (254)
T cd05083         122 VHRDLAARNILVS-------EDGVAKVSDFGLARVGSMGV------DNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLL  187 (254)
T ss_pred             eccccCcceEEEc-------CCCcEEECCCccceeccccC------CCCCCCceecCHHHhcc-CCcCchhhHHHHHHHH
Confidence            6999999999998       88999999999997643221      22244568999998764 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+....+......                              ......+..+.+++.+||..+
T Consensus       188 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~  237 (254)
T cd05083         188 WEVFSYGRAPYPKMSLKEVKECVEKGYRM------------------------------EPPEGCPADVYVLMTSCWETE  237 (254)
T ss_pred             HHHHhCCCCCCccCCHHHHHHHHhCCCCC------------------------------CCCCcCCHHHHHHHHHHcCCC
Confidence            99997 99999877654433332211000                              001245788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+||++++++.
T Consensus       238 p~~Rp~~~~l~~  249 (254)
T cd05083         238 PKKRPSFHKLRE  249 (254)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.85  E-value=4.9e-21  Score=163.47  Aligned_cols=131  Identities=21%  Similarity=0.281  Sum_probs=99.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       ..+.+||+|||++.........  ......++..|+|||++.+ ..++.++|+||+||+
T Consensus       123 i~H~dl~p~ni~i~-------~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~  192 (260)
T cd05073         123 YIHRDLRAANILVS-------ASLVCKIADFGLARVIEDNEYT--AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGIL  192 (260)
T ss_pred             ccccccCcceEEEc-------CCCcEEECCCcceeeccCCCcc--cccCCcccccccCHhHhcc-CCcCccccchHHHHH
Confidence            37999999999998       8899999999999865432211  1122345677999999864 458899999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++++ |..||.+.+..+....+......+                              .....+.++.+++.+||..
T Consensus       193 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~  242 (260)
T cd05073         193 LMEIVTYGRIPYPGMSNPEVIRALERGYRMP------------------------------RPENCPEELYNIMMRCWKN  242 (260)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCC------------------------------CcccCCHHHHHHHHHHccc
Confidence            999998 899998876555444332211100                              1124568899999999999


Q ss_pred             CCCCCCCHHHHh
Q psy7274         164 NPHKRIGVEDAL  175 (308)
Q Consensus       164 dP~~R~t~~eil  175 (308)
                      +|++||++.+++
T Consensus       243 ~p~~Rp~~~~l~  254 (260)
T cd05073         243 RPEERPTFEYIQ  254 (260)
T ss_pred             CcccCcCHHHHH
Confidence            999999998876

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.85  E-value=3.2e-21  Score=185.45  Aligned_cols=137  Identities=23%  Similarity=0.267  Sum_probs=97.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC---------------CCCccCcccccccchhhHhhCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH---------------TGFLTEYVATRWYRAPEIMLNS   69 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~---------------~~~~~~~~gt~~y~aPE~l~~~   69 (308)
                      -.||||||+|||++       .++.+||+|||+|+........               .......+||+.|+|||++.+ 
T Consensus       134 IIHRDLKPeNILLd-------~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-  205 (932)
T PRK13184        134 VLHRDLKPDNILLG-------LFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-  205 (932)
T ss_pred             ccccCCchheEEEc-------CCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-
Confidence            36999999999999       8899999999999866211100               001223579999999999865 


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCC
Q psy7274          70 KGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA  149 (308)
Q Consensus        70 ~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (308)
                      ..++.++||||+||+++||++|+.||.+.........  .....|.  ..                        .....+
T Consensus       206 ~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~--~~i~~P~--~~------------------------~p~~~i  257 (932)
T PRK13184        206 VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR--DVILSPI--EV------------------------APYREI  257 (932)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh--hhccChh--hc------------------------cccccC
Confidence            4589999999999999999999999977543222111  0011000  00                        001246


Q ss_pred             ChhHHHHHHHhcccCCCCCCCHHHHhcC
Q psy7274         150 DPNALDLLGKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       150 s~~~~~ll~~~L~~dP~~R~t~~eil~h  177 (308)
                      ++.+.+++.+||..||++|++..+.+.+
T Consensus       258 P~~L~~LI~rcL~~DP~kR~ss~eeLl~  285 (932)
T PRK13184        258 PPFLSQIAMKALAVDPAERYSSVQELKQ  285 (932)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            7889999999999999999886655543

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=4e-21  Score=165.02  Aligned_cols=132  Identities=14%  Similarity=0.205  Sum_probs=98.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++.......... .....++..|++||.+.+ ..++.++||||+||++
T Consensus       135 ~H~dikp~nili~-------~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il  205 (273)
T cd05074         135 IHRDLAARNCMLN-------ENMTVCVADFGLSKKIYSGDYYRQ-GCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTM  205 (273)
T ss_pred             eecccchhhEEEc-------CCCCEEECcccccccccCCcceec-CCCccCchhhcCHhHHhc-CccchhhhhHHHHHHH
Confidence            6999999999998       889999999999987643221111 123345678999998864 4588999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |++||.+.+..+....+.....                              ....+..+..+.+++.+||..+
T Consensus       206 ~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~l~~~~l~~~  255 (273)
T cd05074         206 WEIMTRGQTPYAGVENSEIYNYLIKGNR------------------------------LKQPPDCLEDVYELMCQCWSPE  255 (273)
T ss_pred             HHHhhCCCCCCCCCCHHHHHHHHHcCCc------------------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence            99998 8899987765444333321100                              0001245688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       256 p~~Rps~~~~~~  267 (273)
T cd05074         256 PKCRPSFQHLRD  267 (273)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.85  E-value=4.5e-21  Score=164.51  Aligned_cols=138  Identities=17%  Similarity=0.175  Sum_probs=95.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC------CCCCchhhH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS------KGYTKSIDI   78 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~------~~~~~~~Di   78 (308)
                      -.||||||+||+++       .++.+||+|||+++......... ......|+..|+|||++.+.      ..++.++|+
T Consensus       121 i~H~dlkp~nil~~-------~~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di  192 (269)
T cd05087         121 FIHSDLALRNCLLT-------ADLTVKIGDYGLSHNKYKEDYYV-TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNV  192 (269)
T ss_pred             EeccccCcceEEEc-------CCCcEEECCccccccccCcceee-cCCCcCCcccccCHhHhccccccccccCCCccchh
Confidence            37999999999999       88999999999997543221111 11234677889999987532      135789999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          79 WSVGCILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        79 WSlG~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      ||+||+++||++ |+.||......+...........                         ..+........+..+.+++
T Consensus       193 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~l~  247 (269)
T cd05087         193 WSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL-------------------------KLPKPRLKLPLSDRWYEVM  247 (269)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC-------------------------CCCCCccCCCCChHHHHHH
Confidence            999999999996 99999776554433322211000                         0000011123567889999


Q ss_pred             HHhcccCCCCCCCHHHHhc
Q psy7274         158 GKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~  176 (308)
                      .+|+ .+|++|||+++++.
T Consensus       248 ~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         248 QFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHh-cCcccCCCHHHHHH
Confidence            9998 68999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.85  E-value=4.2e-21  Score=164.60  Aligned_cols=131  Identities=28%  Similarity=0.450  Sum_probs=101.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.......    ......|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       136 ~H~dl~~~nil~~-------~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll  203 (269)
T cd08528         136 VHRDLTPNNIMLG-------EDDKVTITDFGLAKQKQPES----KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCIL  203 (269)
T ss_pred             eecCCCHHHEEEC-------CCCcEEEecccceeeccccc----ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHH
Confidence            6999999999999       88999999999998754432    1345578899999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||...........+......+..                             ....++.+.+++.+||+.||
T Consensus       204 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~li~~cl~~~p  254 (269)
T cd08528         204 YQMCTLQPPFYSTNMLSLATKIVEAVYEPLP-----------------------------EGMYSEDVTDVITSCLTPDA  254 (269)
T ss_pred             HHHHhCCCcccccCHHHHHHHHhhccCCcCC-----------------------------cccCCHHHHHHHHHHCCCCC
Confidence            9999999999766554444333321111100                             01346889999999999999


Q ss_pred             CCCCCHHHHhcC
Q psy7274         166 HKRIGVEDALAH  177 (308)
Q Consensus       166 ~~R~t~~eil~h  177 (308)
                      ++||++.|+..+
T Consensus       255 ~~Rp~~~e~~~~  266 (269)
T cd08528         255 EARPDIIQVSAM  266 (269)
T ss_pred             ccCCCHHHHHHH
Confidence            999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.84  E-value=4.4e-21  Score=173.38  Aligned_cols=133  Identities=23%  Similarity=0.313  Sum_probs=96.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||++.+ ..++.++||||+||++
T Consensus       259 vH~dikp~Nill~-------~~~~~kL~DfGla~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil  329 (400)
T cd05105         259 VHRDLAARNVLLA-------QGKIVKICDFGLARDIMHDSNYVS-KGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILL  329 (400)
T ss_pred             eCCCCChHhEEEe-------CCCEEEEEeCCcceeccccccccc-cCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHH
Confidence            6999999999999       888999999999986543221111 223456788999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+......+...... +.                       ..     ......+..+.+++.+||..|
T Consensus       330 ~ellt~g~~P~~~~~~~~~~~~~~~~-~~-----------------------~~-----~~~~~~~~~l~~li~~cl~~d  380 (400)
T cd05105         330 WEIFSLGGTPYPGMIVDSTFYNKIKS-GY-----------------------RM-----AKPDHATQEVYDIMVKCWNSE  380 (400)
T ss_pred             HHHHHCCCCCCcccchhHHHHHHHhc-CC-----------------------CC-----CCCccCCHHHHHHHHHHCccC
Confidence            99997 88898765433222211110 00                       00     011245788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++.+
T Consensus       381 P~~RPt~~~l~~  392 (400)
T cd05105         381 PEKRPSFLHLSD  392 (400)
T ss_pred             HhHCcCHHHHHH
Confidence            999999988764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.84  E-value=3.7e-21  Score=170.97  Aligned_cols=134  Identities=23%  Similarity=0.369  Sum_probs=96.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||++.+ ..++.++|+||+||++
T Consensus       201 ~H~dikp~Nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  271 (343)
T cd05103         201 IHRDLAARNILLS-------ENNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLL  271 (343)
T ss_pred             ecCCCccCeEEEc-------CCCcEEEEecccccccccCcchhh-cCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHH
Confidence            6999999999998       889999999999986533221111 122345677999999865 5589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+......+...... +.                       ...     .....++++.+++.+||+.|
T Consensus       272 ~el~~~g~~p~~~~~~~~~~~~~~~~-~~-----------------------~~~-----~~~~~~~~~~~~~~~cl~~~  322 (343)
T cd05103         272 WEIFSLGASPYPGVKIDEEFCRRLKE-GT-----------------------RMR-----APDYTTPEMYQTMLDCWHGE  322 (343)
T ss_pred             HHHHHCCCCCCCCccccHHHHHHHhc-cC-----------------------CCC-----CCCCCCHHHHHHHHHHccCC
Confidence            99996 88998765432222111100 00                       000     01124678999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.++++|
T Consensus       323 p~~Rps~~eil~~  335 (343)
T cd05103         323 PSQRPTFSELVEH  335 (343)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.84  E-value=6.6e-21  Score=164.07  Aligned_cols=133  Identities=17%  Similarity=0.150  Sum_probs=94.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++...........+||+|||++......       ....++..|+|||.+.+...++.++|+||+||++
T Consensus       139 iH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l  211 (274)
T cd05076         139 VHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTL  211 (274)
T ss_pred             cCCCCCcccEEEeccCcccCccceeeecCCccccccccc-------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHH
Confidence            799999999999732222223445899999998654321       2236778899999886555689999999999999


Q ss_pred             HHHh-hCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMI-SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell-~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|++ +|..||.+....+....+.....                                .....++.+.++|.+||..+
T Consensus       212 ~el~~~g~~p~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~li~~cl~~~  259 (274)
T cd05076         212 LEICFDGEVPLKERTPSEKERFYEKKHR--------------------------------LPEPSCKELATLISQCLTYE  259 (274)
T ss_pred             HHHHhCCCCCccccChHHHHHHHHhccC--------------------------------CCCCCChHHHHHHHHHcccC
Confidence            9985 68899876554332211110000                                00123467999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||+.+++++
T Consensus       260 p~~Rps~~~il~~  272 (274)
T cd05076         260 PTQRPSFRTILRD  272 (274)
T ss_pred             hhhCcCHHHHHHh
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.84  E-value=3.8e-21  Score=164.62  Aligned_cols=132  Identities=23%  Similarity=0.345  Sum_probs=97.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||++........   ......|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       128 ~H~dl~~~nil~~-------~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l  196 (267)
T cd08228         128 MHRDIKPANVFIT-------ATGVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLL  196 (267)
T ss_pred             eCCCCCHHHEEEc-------CCCCEEECccccceeccchhH---HHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       889999999999987643221   1234578889999998864 5588999999999999


Q ss_pred             HHHhhCCCCCCCCCH-HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHY-LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+.||.+... ...+.......+.++.                            .....+..+.+++.+||..+
T Consensus       197 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~cl~~~  248 (267)
T cd08228         197 YEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL----------------------------PTEHYSEKLRELVSMCIYPD  248 (267)
T ss_pred             HHHhcCCCCCccccccHHHHHHHHhcCCCCCC----------------------------ChhhcCHHHHHHHHHHCCCC
Confidence            999999999865432 1111111111111100                            01134678999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.++++
T Consensus       249 p~~Rp~~~~vl~  260 (267)
T cd08228         249 PDQRPDIGYVHQ  260 (267)
T ss_pred             cccCcCHHHHHH
Confidence            999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.84  E-value=9.3e-21  Score=164.88  Aligned_cols=139  Identities=14%  Similarity=0.141  Sum_probs=96.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......++..|+|||+..++ .++.++|+||+||++
T Consensus       152 ~H~dlkp~Nili~-------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~-~~~~~~DiwSlG~~l  222 (296)
T cd05095         152 VHRDLATRNCLVG-------KNYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMSWESILLG-KFTTASDVWAFGVTL  222 (296)
T ss_pred             ecccCChheEEEc-------CCCCEEeccCcccccccCCcce-eccCcCcCccccCCHHHHhcC-CccchhhhhHHHHHH
Confidence            7999999999998       8899999999999865432211 111223456789999987654 489999999999999


Q ss_pred             HHHhh--CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMIS--NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~--g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      |||++  |..||...+..+.+.......                    ........   .......+..+.+|+.+||+.
T Consensus       223 ~el~~~~~~~p~~~~~~~~~~~~~~~~~--------------------~~~~~~~~---~~~~~~~~~~~~~li~~cl~~  279 (296)
T cd05095         223 WEILTLCKEQPYSQLSDEQVIENTGEFF--------------------RDQGRQVY---LPKPALCPDSLYKLMLSCWRR  279 (296)
T ss_pred             HHHHHhCCCCCccccChHHHHHHHHHHH--------------------hhcccccc---CCCCCCCCHHHHHHHHHHcCC
Confidence            99998  667887655444332221100                    00000000   001123568899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||.+|||+.++++
T Consensus       280 ~p~~Rp~~~~i~~  292 (296)
T cd05095         280 NAKERPSFQEIHA  292 (296)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.84  E-value=3.1e-21  Score=166.77  Aligned_cols=147  Identities=18%  Similarity=0.238  Sum_probs=96.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................++..|+|||.+.+ ..++.++||||+||++
T Consensus       129 ~H~dlkp~Nili~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l  200 (283)
T cd05080         129 IHRDLAARNVLLD-------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTL  200 (283)
T ss_pred             eccccChheEEEc-------CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHH
Confidence            6999999999998       8899999999999876433211111122345667999998864 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|..||......  +..+.. ..+......+.        .......   ..+   .....+..+.+++.+||..+
T Consensus       201 ~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~---~~~~~~~~~~~li~~cl~~~  264 (283)
T cd05080         201 YELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLI--------ELLERGM---RLP---CPKNCPQEVYILMKNCWETE  264 (283)
T ss_pred             HHHHhCCCCCCCCcch--hhhhhcccccccchhhhh--------hhhhcCC---CCC---CCCCCCHHHHHHHHHHhccC
Confidence            9999999887543311  111110 00000000000        0000000   000   12345789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||++++++
T Consensus       265 p~~Rps~~~i~~  276 (283)
T cd05080         265 AKFRPTFRSLIP  276 (283)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.84  E-value=9.9e-21  Score=173.68  Aligned_cols=150  Identities=21%  Similarity=0.271  Sum_probs=96.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCC--------------
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG--------------   71 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--------------   71 (308)
                      .||||||+|||++       .++.+||+|||+++.........  .....+|+.|+|||++.....              
T Consensus       331 vHrDLKp~NILl~-------~~~~~kL~DFGla~~~~~~~~~~--~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~  401 (507)
T PLN03224        331 VHRDIKPENLLVT-------VDGQVKIIDFGAAVDMCTGINFN--PLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLS  401 (507)
T ss_pred             ecCCCchHhEEEC-------CCCcEEEEeCcCccccccCCccC--ccccCCCcceeChhhhcCCCCCCccchhhhhhhhh
Confidence            6999999999998       88999999999997654322111  112245789999998753211              


Q ss_pred             -----C--CchhhHHHHHHHHHHHhhCCC-CCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcc
Q psy7274          72 -----Y--TKSIDIWSVGCILAEMISNRP-IFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE  143 (308)
Q Consensus        72 -----~--~~~~DiWSlG~il~ell~g~~-pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (308)
                           |  ...+|+||+||++++|++|.. +|.+..........   ..    ....     ..+.+..     ....+.
T Consensus       402 ~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~---~~----~~~~-----~~r~~~~-----~~~~~~  464 (507)
T PLN03224        402 PFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ---YD----NDLN-----RWRMYKG-----QKYDFS  464 (507)
T ss_pred             hhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh---cc----chHH-----HHHhhcc-----cCCCcc
Confidence                 1  234799999999999999873 66433211110000   00    0000     0000000     011111


Q ss_pred             ccCCCCChhHHHHHHHhcccCC---CCCCCHHHHhcCCcccc
Q psy7274         144 ILYPNADPNALDLLGKMLTFNP---HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       144 ~~~~~~s~~~~~ll~~~L~~dP---~~R~t~~eil~hp~f~~  182 (308)
                       .+...++.++||+.+||..+|   .+|+|++|+|+||||..
T Consensus       465 -~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        465 -LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             -cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence             244578999999999999866   68999999999999953

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.84  E-value=5.2e-21  Score=163.78  Aligned_cols=130  Identities=23%  Similarity=0.359  Sum_probs=96.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+||+++       .++.++|+|||++........   .....+|+..|+|||.+.+ ..++.++|+||+||++
T Consensus       128 ~H~dl~p~nili~-------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il  196 (267)
T cd08229         128 MHRDIKPANVFIT-------ATGVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLL  196 (267)
T ss_pred             ecCCCCHHHEEEc-------CCCCEEECcchhhhccccCCc---ccccccCCcCccCHHHhcC-CCccchhhHHHHHHHH
Confidence            6999999999999       889999999999886643221   1234578899999998854 5588999999999999


Q ss_pred             HHHhhCCCCCCCCCHH--HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMISNRPIFPGKHYL--DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~--~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|++|..||.+....  .....+... .                        .+..    .....+..+.+++.+||..
T Consensus       197 ~~l~~g~~p~~~~~~~~~~~~~~~~~~-~------------------------~~~~----~~~~~~~~~~~li~~~l~~  247 (267)
T cd08229         197 YEMAALQSPFYGDKMNLYSLCKKIEQC-D------------------------YPPL----PSDHYSEELRQLVNMCINP  247 (267)
T ss_pred             HHHHhCCCCcccccchHHHHhhhhhcC-C------------------------CCCC----CcccccHHHHHHHHHhcCC
Confidence            9999999999764321  111111100 0                        0000    0123578899999999999


Q ss_pred             CCCCCCCHHHHh
Q psy7274         164 NPHKRIGVEDAL  175 (308)
Q Consensus       164 dP~~R~t~~eil  175 (308)
                      ||.+|||+.+++
T Consensus       248 ~p~~Rpt~~~i~  259 (267)
T cd08229         248 DPEKRPDITYVY  259 (267)
T ss_pred             CcccCCCHHHHH
Confidence            999999999775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0193|consensus

Probab=99.84  E-value=1.3e-21  Score=174.72  Aligned_cols=137  Identities=17%  Similarity=0.200  Sum_probs=101.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG~   83 (308)
                      .|||||..||++.       .++.|||+|||++..-.... ....+....|...|||||++.-.  ..|+..+||||+||
T Consensus       510 IHrDLKSnNIFl~-------~~~kVkIgDFGLatvk~~w~-g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGi  581 (678)
T KOG0193|consen  510 IHRDLKSNNIFLH-------EDLKVKIGDFGLATVKTRWS-GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGI  581 (678)
T ss_pred             hhhhccccceEEc-------cCCcEEEecccceeeeeeec-cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhH
Confidence            5999999999998       78999999999987533221 11113445678899999998632  45899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|||++|..||...+....+.++-+..+.|...                          ....+...++++|+..||.+
T Consensus       582 V~YELltg~lPysi~~~dqIifmVGrG~l~pd~s--------------------------~~~s~~pk~mk~Ll~~C~~~  635 (678)
T KOG0193|consen  582 VWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLS--------------------------KIRSNCPKAMKRLLSDCWKF  635 (678)
T ss_pred             HHHHHHhCcCCcCCCChhheEEEecccccCccch--------------------------hhhccCHHHHHHHHHHHHhc
Confidence            9999999999998554444333333322222221                          11234567999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ++++||...+||.
T Consensus       636 ~~~eRP~F~~il~  648 (678)
T KOG0193|consen  636 DREERPLFPQLLS  648 (678)
T ss_pred             CcccCccHHHHHH
Confidence            9999999988874

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.84  E-value=7.8e-21  Score=161.72  Aligned_cols=127  Identities=21%  Similarity=0.337  Sum_probs=96.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||.++......      ....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       124 ~H~di~p~Nili~-------~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il  189 (256)
T cd05039         124 VHRDLAARNVLVS-------EDLVAKVSDFGLAKEASQGQ------DSGKLPVKWTAPEALRE-KKFSTKSDVWSFGILL  189 (256)
T ss_pred             cchhcccceEEEe-------CCCCEEEccccccccccccc------ccCCCcccccCchhhcC-CcCCcHHHHHHHHHHH
Confidence            6999999999998       88999999999998763321      12244567999998864 4588999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |..||......+....+....                         ..     ......++.+.++|.+||..+
T Consensus       190 ~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------------------~~-----~~~~~~~~~~~~li~~~l~~~  239 (256)
T cd05039         190 WEIYSFGRVPYPRIPLKDVVPHVEKGY-------------------------RM-----EAPEGCPPEVYKVMKDCWELD  239 (256)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHhcCC-------------------------CC-----CCccCCCHHHHHHHHHHhccC
Confidence            99997 999997765444333222100                         00     011245789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       240 p~~Rp~~~~l~~  251 (256)
T cd05039         240 PAKRPTFKQLRE  251 (256)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.84  E-value=1e-20  Score=160.81  Aligned_cols=131  Identities=20%  Similarity=0.270  Sum_probs=99.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++.........  .....++..|+|||.+. ...++.++|+||+||++
T Consensus       125 ~h~dl~~~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~i~  194 (258)
T smart00219      125 IHRDLAARNCLVG-------ENLVVKISDFGLSRDLYDDDYYK--KKGGKLPIRWMAPESLK-DGKFTSKSDVWSFGVLL  194 (258)
T ss_pred             eecccccceEEEc-------cCCeEEEcccCCceecccccccc--cccCCCcccccChHHhc-cCCCCcchhHHHHHHHH
Confidence            6999999999999       88899999999998765432111  11223678899999874 45689999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |.+||.+.+.......+......                              ......+..+.+++.+||..|
T Consensus       195 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~i~~~l~~~  244 (258)
T smart00219      195 WEIFTLGESPYPGMSNEEVLEYLKKGYRL------------------------------PKPENCPPEIYKLMLQCWAED  244 (258)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhcCCCC------------------------------CCCCcCCHHHHHHHHHHCcCC
Confidence            99998 78898876655554444321100                              011235788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       245 p~~Rpt~~~ll~  256 (258)
T smart00219      245 PEDRPTFSELVE  256 (258)
T ss_pred             hhhCcCHHHHHh
Confidence            999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.84  E-value=1.2e-20  Score=161.86  Aligned_cols=137  Identities=17%  Similarity=0.208  Sum_probs=96.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC------CCCCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN------SKGYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~~~~DiW   79 (308)
                      .||||||+|||++       .++.+||+|||++....... ........+|+..|+|||++..      ...++.++|||
T Consensus       121 ~H~dikp~nil~~-------~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  192 (268)
T cd05086         121 LHSDLALRNCFLT-------SDLTVKVGDYGIGPSRYKED-YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVW  192 (268)
T ss_pred             eccCCccceEEEc-------CCccEEecccccccccCcch-hhhcccCCcCcccccCchhcccccCccccCCCCCcchhH
Confidence            6999999999998       88999999999986432211 1111234578889999998742      12357889999


Q ss_pred             HHHHHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHH
Q psy7274          80 SVGCILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLG  158 (308)
Q Consensus        80 SlG~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  158 (308)
                      |+||+++||++ |..||.+.+..+.+..+.......                   .      .-.......++.+.+++.
T Consensus       193 slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------------~------~~~~~~~~~~~~~~~l~~  247 (268)
T cd05086         193 ALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK-------------------L------FKPQLELPYSERWYEVLQ  247 (268)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc-------------------c------CCCccCCCCcHHHHHHHH
Confidence            99999999997 567887776655555443211000                   0      001111235788899999


Q ss_pred             HhcccCCCCCCCHHHHhc
Q psy7274         159 KMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       159 ~~L~~dP~~R~t~~eil~  176 (308)
                      .|+ .+|++|||++++++
T Consensus       248 ~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         248 FCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHh-hCcccCCCHHHHHH
Confidence            999 68999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.84  E-value=5.2e-21  Score=165.47  Aligned_cols=150  Identities=18%  Similarity=0.300  Sum_probs=98.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++................++..|+|||++.+ ..++.++||||+||+
T Consensus       130 i~H~dlkp~Nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~i  201 (284)
T cd05079         130 YVHRDLAARNVLVE-------SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVT  201 (284)
T ss_pred             eeecccchheEEEc-------CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhh
Confidence            37999999999998       8899999999999876543221111234566778999999865 458899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++++.+.....     .......+.........    ...........      .......+..+.+|+.+||+.+
T Consensus       202 l~ellt~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~  266 (284)
T cd05079         202 LYELLTYCDSESSPM-----TLFLKMIGPTHGQMTVT----RLVRVLEEGKR------LPRPPNCPEEVYQLMRKCWEFQ  266 (284)
T ss_pred             hhhhhcCCCCCcccc-----chhhhhcccccccccHH----HHHHHHHcCcc------CCCCCCCCHHHHHHHHHHccCC
Confidence            999999876542211     11111111111110000    00000110000      0112356889999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.+++++
T Consensus       267 p~~Rpt~~~il~~  279 (284)
T cd05079         267 PSKRTTFQNLIEG  279 (284)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999853

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.83  E-value=8.4e-21  Score=162.78  Aligned_cols=133  Identities=17%  Similarity=0.270  Sum_probs=97.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCc--ccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~--~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .||||||+||+++       .++.+||+|||+++...............  .++..|+|||.+.+ ..++.++||||+||
T Consensus       128 ~H~dl~p~nili~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~  199 (269)
T cd05065         128 VHRDLAARNILVN-------SNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGI  199 (269)
T ss_pred             eecccChheEEEc-------CCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHH
Confidence            6999999999998       88999999999988654322111111111  12457999999864 55899999999999


Q ss_pred             HHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++|+++ |..||.+.+..+....+......+.                              ....+..+.+++.+||.
T Consensus       200 ~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~------------------------------~~~~~~~~~~li~~~l~  249 (269)
T cd05065         200 VMWEVMSYGERPYWDMSNQDVINAIEQDYRLPP------------------------------PMDCPTALHQLMLDCWQ  249 (269)
T ss_pred             HHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCC------------------------------cccCCHHHHHHHHHHcC
Confidence            9999886 9999987765554444422111110                              12356789999999999


Q ss_pred             cCCCCCCCHHHHhc
Q psy7274         163 FNPHKRIGVEDALA  176 (308)
Q Consensus       163 ~dP~~R~t~~eil~  176 (308)
                      .+|.+||++++++.
T Consensus       250 ~~p~~Rp~~~~i~~  263 (269)
T cd05065         250 KDRNARPKFGQIVS  263 (269)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.83  E-value=2.1e-20  Score=168.89  Aligned_cols=134  Identities=21%  Similarity=0.277  Sum_probs=99.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       261 vHrdlkp~NiLl~-------~~~~~kL~DfGla~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil  331 (401)
T cd05107         261 VHRDLAARNVLIC-------EGKLVKICDFGLARDIMRDSNYIS-KGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILL  331 (401)
T ss_pred             CcccCCcceEEEe-------CCCEEEEEecCcceeccccccccc-CCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHH
Confidence            6999999999998       889999999999986533221111 123467888999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+....+.+...... +..                       .     .....++.++.+|+.+||..+
T Consensus       332 ~e~l~~g~~P~~~~~~~~~~~~~~~~-~~~-----------------------~-----~~p~~~~~~l~~li~~cl~~~  382 (401)
T cd05107         332 WEIFTLGGTPYPELPMNEQFYNAIKR-GYR-----------------------M-----AKPAHASDEIYEIMQKCWEEK  382 (401)
T ss_pred             HHHHHcCCCCCCCCCchHHHHHHHHc-CCC-----------------------C-----CCCCCCCHHHHHHHHHHcCCC
Confidence            99998 88898765544433222110 000                       0     011245789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+||++.++++.
T Consensus       383 P~~RPs~~ell~~  395 (401)
T cd05107         383 FEIRPDFSQLVHL  395 (401)
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.83  E-value=2.1e-20  Score=161.18  Aligned_cols=131  Identities=20%  Similarity=0.282  Sum_probs=97.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......... .....++..|+|||.+.. ..++.++|+||+||++
T Consensus       131 ~H~di~p~nil~~-------~~~~~kL~dfg~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l  201 (279)
T cd05057         131 VHRDLAARNVLVK-------TPQHVKITDFGLAKLLDVDEKEYH-AEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTV  201 (279)
T ss_pred             EecccCcceEEEc-------CCCeEEECCCcccccccCccccee-cCCCcccccccCHHHhhc-CCcCchhhHHHHHHHH
Confidence            6999999999998       889999999999987653321111 112223567999998754 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+++ |+.||.+....+....+......+                              .....+..+.+++.+||..+
T Consensus       202 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~l~~~  251 (279)
T cd05057         202 WELMTFGAKPYEGIPAVEIPDLLEKGERLP------------------------------QPPICTIDVYMVLVKCWMID  251 (279)
T ss_pred             HHHhcCCCCCCCCCCHHHHHHHHhCCCCCC------------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            99998 999998876544433332110000                              01234678999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |.+|||+.+++
T Consensus       252 p~~Rp~~~~l~  262 (279)
T cd05057         252 AESRPTFKELI  262 (279)
T ss_pred             hhhCCCHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.83  E-value=2.1e-20  Score=156.92  Aligned_cols=135  Identities=38%  Similarity=0.632  Sum_probs=102.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||+|.||+++       .++.++|+|||.+.......    ......++..|++||.+.+ ..++.++|+||+|+++
T Consensus       109 ~h~~i~~~ni~~~-------~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~~pE~~~~-~~~~~~~Di~slG~~l  176 (244)
T smart00220      109 IHRDLKPENILLD-------EDGHVKLADFGLARQLDPGG----LLTTFVGTPEYMAPEVLLG-KGYGKAVDVWSLGVIL  176 (244)
T ss_pred             ecCCcCHHHeEEC-------CCCcEEEccccceeeecccc----ccccccCCcCCCCHHHHcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       78999999999998765432    1344578889999998864 4588899999999999


Q ss_pred             HHHhhCCCCCCCCCHHH-HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLD-QLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++|..||....... ....+.......                            .......+..+.+++.+||..+
T Consensus       177 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~i~~~l~~~  228 (244)
T smart00220      177 YELLTGKPPFPGDDQLLELFKKIGKPKPPF----------------------------PPPEWKISPEAKDLIRKLLVKD  228 (244)
T ss_pred             HHHHhCCCCCCCCCcHHHHHHHHhccCCCC----------------------------ccccccCCHHHHHHHHHHccCC
Confidence            99999999997733222 222221110000                            0000115678999999999999


Q ss_pred             CCCCCCHHHHhcCCcc
Q psy7274         165 PHKRIGVEDALAHPYL  180 (308)
Q Consensus       165 P~~R~t~~eil~hp~f  180 (308)
                      |++||++.++++||||
T Consensus       229 p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      229 PEKRLTAEEALQHPFF  244 (244)
T ss_pred             chhccCHHHHhhCCCC
Confidence            9999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.83  E-value=3.8e-20  Score=177.40  Aligned_cols=143  Identities=20%  Similarity=0.285  Sum_probs=107.3

Q ss_pred             cCCCCCCCCC-CcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           4 FNPHKRIGVE-GALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         4 ~~~HrDlKp~-Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      .++|++.+|. |++++       ..+.+++.|||.++........ ......+||+.|+|||++.+ ..++.++||||+|
T Consensus       497 ~~~~~~~~p~~~~~~~-------p~~~~~~~~~~~~~~~~~g~~~-~~~~~~vGT~~Y~APE~l~~-~~~~~~~DiwSlG  567 (669)
T cd05610         497 ITPTQKPRPHGNLYQT-------PKQVKIGTPYRTPKSVRRGAAP-VEGERILGTPDYLAPELLLG-KPHGPAVDWWALG  567 (669)
T ss_pred             cCCCCCCCCCCceeEC-------CccccccccCCCchhhhccccc-ccCCceeeCccccCHHHcCC-CCCCcHHHHHHHH
Confidence            3577888887 45555       5556788999998876433221 11345689999999999976 5599999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++|||++|++||.+....+.+..+.....                            ++......++..+.+++.+||.
T Consensus       568 ~il~ElltG~~pf~~~~~~~~~~~il~~~~----------------------------~~p~~~~~~~~~~~~~l~~lL~  619 (669)
T cd05610         568 VCLFEFLTGIPPFNDETPQQVFQNILNRDI----------------------------PWPEGEEKLSVNAQNAIEILLT  619 (669)
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHhcCC----------------------------CCCcccccCCHHHHHHHHHHcc
Confidence            999999999999998877666555432110                            0111112457889999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .||.+|+|+.++++||||...
T Consensus       620 ~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         620 MDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             cChhHCcCHHHHHhCHhhcCC
Confidence            999999999999999999653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.83  E-value=2.2e-20  Score=159.74  Aligned_cols=131  Identities=25%  Similarity=0.407  Sum_probs=96.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++........   .....++..|+|||.+.+ ..++.++|+||+||++
T Consensus       128 ~h~dl~p~nil~~-------~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il  196 (267)
T cd08224         128 MHRDIKPANVFIT-------ATGVVKLGDLGLGRFFSSKTTA---AHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLL  196 (267)
T ss_pred             ecCCcChhhEEEC-------CCCcEEEeccceeeeccCCCcc---cceecCCccccCHHHhcc-CCCCchhcHHHHHHHH
Confidence            6999999999999       8899999999998865432211   233578889999998864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCH--HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMISNRPIFPGKHY--LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~g~~pf~~~~~--~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|++|+.||.+...  .+....+.....                         ...+    ....+..+.++|.+||..
T Consensus       197 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~----~~~~~~~~~~~i~~cl~~  247 (267)
T cd08224         197 YEMAALQSPFYGDKMNLYSLCKKIEKCDY-------------------------PPLP----ADHYSEELRDLVSRCINP  247 (267)
T ss_pred             HHHHHCCCCcccCCccHHHHHhhhhcCCC-------------------------CCCC----hhhcCHHHHHHHHHHcCC
Confidence            999999999865431  111111111000                         0000    113567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|++|||+.++++
T Consensus       248 ~p~~Rp~~~~il~  260 (267)
T cd08224         248 DPEKRPDISYVLQ  260 (267)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0984|consensus

Probab=99.83  E-value=3.4e-21  Score=151.16  Aligned_cols=93  Identities=26%  Similarity=0.402  Sum_probs=74.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC---CCCCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~~~DiWSlG   82 (308)
                      .|||+||+||||+       ..|++||||||++-.+..+...    +--.|-..|+|||.+-.   ..+|+-++||||||
T Consensus       171 IHRDvKPsNiLIn-------~~GqVKiCDFGIsG~L~dSiAk----t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLG  239 (282)
T KOG0984|consen  171 IHRDVKPSNILIN-------YDGQVKICDFGISGYLVDSIAK----TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLG  239 (282)
T ss_pred             hhccCCcceEEEc-------cCCcEEEcccccceeehhhhHH----HHhcCCCccCChhhcCcccCcccceeehhhhhhh
Confidence            6999999999999       9999999999999876543221    22356678999998742   34699999999999


Q ss_pred             HHHHHHhhCCCCCCC-CCHHHHHHHHHH
Q psy7274          83 CILAEMISNRPIFPG-KHYLDQLNHILG  109 (308)
Q Consensus        83 ~il~ell~g~~pf~~-~~~~~~l~~i~~  109 (308)
                      +.+.||.+++.||.. .+..+|+..+++
T Consensus       240 ItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  240 ITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             hhhhhhhhccccccccCCHHHHHHHHhc
Confidence            999999999999864 456677766654

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.82  E-value=1.8e-20  Score=162.05  Aligned_cols=147  Identities=15%  Similarity=0.252  Sum_probs=95.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++................++..|+|||++.+ ..++.++|+||+||++
T Consensus       130 ~H~dlkp~nili~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  201 (284)
T cd05081         130 VHRDLATRNILVE-------SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVL  201 (284)
T ss_pred             eeccCCHhhEEEC-------CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHH
Confidence            7999999999999       8899999999999876433211111112234456999999864 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCCh--hhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTP--EDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +||++|..++..... ...    ...+....  .....     .........   ..   ......+.++.+|+.+||..
T Consensus       202 ~el~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~---~~---~~~~~~~~~~~~li~~cl~~  265 (284)
T cd05081         202 YELFTYSDKSCSPPA-EFM----RMMGNDKQGQMIVYH-----LIELLKNNG---RL---PAPPGCPAEIYAIMKECWNN  265 (284)
T ss_pred             HHHhhcCCcCCCcch-hhh----hhcccccccccchHH-----HHHHHhcCC---cC---CCCCCCCHHHHHHHHHHccC
Confidence            999998766543221 111    11111100  00000     001111100   00   01235678999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|++|||+.++++
T Consensus       266 ~p~~Rpt~~ei~~  278 (284)
T cd05081         266 DPSQRPSFSELAL  278 (284)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.82  E-value=3.3e-20  Score=157.94  Aligned_cols=132  Identities=19%  Similarity=0.170  Sum_probs=91.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++.........+.+||+|||++......       ....++..|+|||++.+. ..++.++|+||+||+
T Consensus       123 ~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~  195 (259)
T cd05037         123 VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR-------EERVERIPWIAPECIRNGQASLTIAADKWSFGTT  195 (259)
T ss_pred             ecccCccceEEEecCccccCCceeEEeCCCCcccccccc-------cccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence            799999999999821111111127999999999875431       223567789999998654 358999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||...+..........                         ...  .     .......+.+++.+||..
T Consensus       196 ~~~l~~~~~~p~~~~~~~~~~~~~~~-------------------------~~~--~-----~~~~~~~~~~li~~~l~~  243 (259)
T cd05037         196 LLEICSNGEEPLSTLSSSEKERFYQD-------------------------QHR--L-----PMPDCAELANLINQCWTY  243 (259)
T ss_pred             HHHHHhCCCCCcccCCchhHHHHHhc-------------------------CCC--C-----CCCCchHHHHHHHHHhcc
Confidence            999999 4677755432211111100                         000  0     001136889999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +|.+|||+.++++
T Consensus       244 ~p~~Rpt~~~il~  256 (259)
T cd05037         244 DPTKRPSFRAILR  256 (259)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1026|consensus

Probab=99.82  E-value=1e-20  Score=175.36  Aligned_cols=131  Identities=21%  Similarity=0.288  Sum_probs=104.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||...|.||.       ++-.|||+|||++|..-....+.. .....-...||+||.++.+ .|++++||||+||++
T Consensus       625 VHRDLATRNCLVg-------e~l~VKIsDfGLsRdiYssDYYk~-~~~t~lPIRWMppEsIly~-kFTteSDVWs~GVvL  695 (774)
T KOG1026|consen  625 VHRDLATRNCLVG-------ENLVVKISDFGLSRDIYSSDYYKV-RGNTLLPIRWMPPESILYG-KFTTESDVWSFGVVL  695 (774)
T ss_pred             cccchhhhhceec-------cceEEEecccccchhhhhhhhhcc-cCCceeeeecCCHHHhhcC-cccchhhhhhhhhhh
Confidence            6999999999999       999999999999997643322211 1122335679999999864 499999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||+++ |+.|+.|-++.+.+..|.+.--.+.|                              .+.+.++.+||..||+.+
T Consensus       696 WEIFsyG~QPy~glSn~EVIe~i~~g~lL~~P------------------------------e~CP~~vY~LM~~CW~~~  745 (774)
T KOG1026|consen  696 WEIFSYGKQPYYGLSNQEVIECIRAGQLLSCP------------------------------ENCPTEVYSLMLECWNEN  745 (774)
T ss_pred             hhhhccccCcccccchHHHHHHHHcCCcccCC------------------------------CCCCHHHHHHHHHHhhcC
Confidence            99998 89999999999998888643212222                              246789999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |++||++.||-
T Consensus       746 P~~RPsF~eI~  756 (774)
T KOG1026|consen  746 PKRRPSFKEIH  756 (774)
T ss_pred             cccCCCHHHHH
Confidence            99999998873

>KOG1151|consensus

Probab=99.82  E-value=5.6e-21  Score=165.26  Aligned_cols=145  Identities=24%  Similarity=0.410  Sum_probs=106.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC----CCCccCcccccccchhhHhhCC---CCCCchhhH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH----TGFLTEYVATRWYRAPEIMLNS---KGYTKSIDI   78 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~---~~~~~~~Di   78 (308)
                      .|=||||.|||+-    .-+..|.+||+|||+++.+......    ....+...||-||.+||.+.-+   ...+.++||
T Consensus       592 IHYDLKPgNILLv----~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDV  667 (775)
T KOG1151|consen  592 IHYDLKPGNILLV----NGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDV  667 (775)
T ss_pred             eeeccCCccEEEe----cCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceee
Confidence            5899999999984    2335688999999999988654322    1133567899999999987643   347889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCH-HHHHH--HHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          79 WSVGCILAEMISNRPIFPGKHY-LDQLN--HILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        79 WSlG~il~ell~g~~pf~~~~~-~~~l~--~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      ||+|||+|.++.|+.||...-. .+.+.  .|+.....                   .+|   .      -|-++.++.+
T Consensus       668 WSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEV-------------------qFP---~------KPvVsseAka  719 (775)
T KOG1151|consen  668 WSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEV-------------------QFP---P------KPVVSSEAKA  719 (775)
T ss_pred             EeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceec-------------------cCC---C------CCccCHHHHH
Confidence            9999999999999999944321 11111  11110000                   001   0      1347899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         156 LLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       156 ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ||++||.+.-.+|..+.++..||||.-
T Consensus       720 FIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  720 FIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             HHHHHHHhhhhhhhhHHHHccCccccc
Confidence            999999999999999999999999953

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.81  E-value=1e-19  Score=156.47  Aligned_cols=133  Identities=16%  Similarity=0.253  Sum_probs=97.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.++|+|||+++........  ......++..|+|||.+.+ ..++.++||||+||++
T Consensus       139 ~H~dlkp~Nili~-------~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l  208 (275)
T cd05046         139 VHRDLAARNCLVS-------SQREVKVSLLSLSKDVYNSEYY--KLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLM  208 (275)
T ss_pred             ccCcCccceEEEe-------CCCcEEEcccccccccCccccc--ccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999998754322111  1233466778999998764 4488999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++++ |..||.+......+..+....                      .      .+ ......+..+.+++.+||+.+
T Consensus       209 ~~l~~~~~~p~~~~~~~~~~~~~~~~~----------------------~------~~-~~~~~~~~~l~~~i~~~l~~~  259 (275)
T cd05046         209 WEVFTQGELPFYGLSDEEVLNRLQAGK----------------------L------EL-PVPEGCPSRLYKLMTRCWAVN  259 (275)
T ss_pred             HHHHhCCCCCccccchHHHHHHHHcCC----------------------c------CC-CCCCCCCHHHHHHHHHHcCCC
Confidence            99998 778887655444333322100                      0      00 011245688999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.++++.
T Consensus       260 p~~Rp~~~~~l~~  272 (275)
T cd05046         260 PKDRPSFSELVSA  272 (275)
T ss_pred             cccCCCHHHHHHH
Confidence            9999999998853

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0587|consensus

Probab=99.81  E-value=1.1e-20  Score=175.03  Aligned_cols=140  Identities=24%  Similarity=0.397  Sum_probs=112.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC----CCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK----GYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~~~DiWSl   81 (308)
                      .|||||-.|||++       .++.|||+|||++..+....   +...+.+||+.|||||++....    .|+..+|+|||
T Consensus       145 iHRDikG~NiLLT-------~e~~VKLvDFGvSaQldsT~---grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsL  214 (953)
T KOG0587|consen  145 IHRDIKGQNVLLT-------ENAEVKLVDFGVSAQLDSTV---GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSL  214 (953)
T ss_pred             eeecccCceEEEe-------ccCcEEEeeeeeeeeeeccc---ccccCcCCCcccccceeeecccCCCCCcccccchhhc
Confidence            5999999999999       99999999999999887643   2246679999999999986432    36788999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |++..||.-|.+|+..-.....+   +.+...|+|....                         ..+.+.++.+||..||
T Consensus       215 GITaIEladG~PPl~DmHPmraL---F~IpRNPPPkLkr-------------------------p~kWs~~FndFIs~cL  266 (953)
T KOG0587|consen  215 GITAIEMAEGAPPLCDMHPMRAL---FLIPRNPPPKLKR-------------------------PKKWSKKFNDFISTCL  266 (953)
T ss_pred             cceeehhcCCCCCccCcchhhhh---ccCCCCCCccccc-------------------------hhhHHHHHHHHHHHHH
Confidence            99999999999998665544333   3334444443221                         1245789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ..|-.+||++.++|+|||++..
T Consensus       267 ~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  267 VKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             hhccccCcchhhhccCCccccc
Confidence            9999999999999999999843

>KOG0606|consensus

Probab=99.81  E-value=3.3e-20  Score=175.20  Aligned_cols=143  Identities=24%  Similarity=0.352  Sum_probs=116.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC------------CCCccCcccccccchhhHhhCCCCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH------------TGFLTEYVATRWYRAPEIMLNSKGY   72 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~------------~~~~~~~~gt~~y~aPE~l~~~~~~   72 (308)
                      -+|||+||+|.||.       .-|++|++|||+++........            .-.....|||+.|+|||+++- ++|
T Consensus       164 ivhrdlkpdnllIT-------~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgy  235 (1205)
T KOG0606|consen  164 IVHRDLKPDNLLIT-------SMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGY  235 (1205)
T ss_pred             eecCCCCCCcceee-------ecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hcc
Confidence            47999999999999       8999999999998864321100            001245699999999999974 679


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChh
Q psy7274          73 TKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN  152 (308)
Q Consensus        73 ~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  152 (308)
                      +..||+|++|+|+||++.|+.||.|+...+.+..++......+.++                            ....++
T Consensus       236 gkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~d----------------------------ea~p~E  287 (1205)
T KOG0606|consen  236 GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEED----------------------------EALPPE  287 (1205)
T ss_pred             CCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccC----------------------------cCCCHH
Confidence            9999999999999999999999999999888888776544333322                            235689


Q ss_pred             HHHHHHHhcccCCCCCCC---HHHHhcCCccccc
Q psy7274         153 ALDLLGKMLTFNPHKRIG---VEDALAHPYLEQY  183 (308)
Q Consensus       153 ~~~ll~~~L~~dP~~R~t---~~eil~hp~f~~~  183 (308)
                      +.++|.++|+.+|..|..   +-++.+|+||+..
T Consensus       288 a~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L  321 (1205)
T KOG0606|consen  288 AQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL  321 (1205)
T ss_pred             HHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence            999999999999999974   6789999999864

>KOG3653|consensus

Probab=99.80  E-value=6.7e-20  Score=159.61  Aligned_cols=152  Identities=22%  Similarity=0.278  Sum_probs=107.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCC-----chhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-----KSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~-----~~~DiWS   80 (308)
                      .|||||..||||.       ++++..|+|||+|..+........ ....|||+.|||||++-+...+.     ..+||||
T Consensus       338 aHRDlkSkNVLvK-------~DlTccIaDFGLAl~~~p~~~~~d-~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYa  409 (534)
T KOG3653|consen  338 AHRDLKSKNVLVK-------NDLTCCIADFGLALRLEPGKPQGD-THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYA  409 (534)
T ss_pred             ccccccccceEEc-------cCCcEEeeccceeEEecCCCCCcc-hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHH
Confidence            6999999999999       999999999999999886654443 45689999999999997655554     4689999


Q ss_pred             HHHHHHHHhhCCCCCC-CCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          81 VGCILAEMISNRPIFP-GKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        81 lG~il~ell~g~~pf~-~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      +|.++|||+++...+. |....-++.--.++-..|+-+.+....-.+        ..++..+-.+.-...-..+.+.+..
T Consensus       410 mgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~k--------K~RP~~p~~W~~h~~~~~l~et~Ee  481 (534)
T KOG3653|consen  410 MGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRK--------KQRPKIPDAWRKHAGMAVLCETIEE  481 (534)
T ss_pred             HHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhh--------ccCCCChhhhhcCccHHHHHHHHHH
Confidence            9999999999886653 443333333333444556666665443211        1122222112111233567899999


Q ss_pred             hcccCCCCCCCHHH
Q psy7274         160 MLTFNPHKRIGVED  173 (308)
Q Consensus       160 ~L~~dP~~R~t~~e  173 (308)
                      ||..|++.|+||.=
T Consensus       482 CWDhDaeARLTA~C  495 (534)
T KOG3653|consen  482 CWDHDAEARLTAGC  495 (534)
T ss_pred             HcCCchhhhhhhHH
Confidence            99999999999753

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.80  E-value=4.8e-20  Score=159.09  Aligned_cols=149  Identities=19%  Similarity=0.267  Sum_probs=96.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++.................++..|+|||.+.+ ..++.++|+||+||+
T Consensus       130 i~H~dl~p~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~  201 (284)
T cd05038         130 YIHRDLAARNILVE-------SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVT  201 (284)
T ss_pred             eecCCCCHHhEEEc-------CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhh
Confidence            37999999999999       8899999999999876532211111112344567999998865 458899999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||++|..|+.......     ....+........    ............   .+   .....+.++.+++.+||..+
T Consensus       202 l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~~~~---~~---~~~~~~~~~~~li~~cl~~~  266 (284)
T cd05038         202 LYELFTYGDPSQSPPAEF-----LRMIGIAQGQMIV----TRLLELLKEGER---LP---RPPSCPDEVYDLMKLCWEAE  266 (284)
T ss_pred             hheeeccCCCcccccchh-----ccccccccccccH----HHHHHHHHcCCc---CC---CCccCCHHHHHHHHHHhccC
Confidence            999999998875533211     0111110000000    000001111000   00   01234578999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       267 p~~Rpt~~ei~~  278 (284)
T cd05038         267 PQDRPSFADLIL  278 (284)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.80  E-value=2.6e-20  Score=159.06  Aligned_cols=132  Identities=20%  Similarity=0.320  Sum_probs=96.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|++|+++||+++       +++.+||+|||++......... .......+...|+|||.+.+. .++.++||||+|+++
T Consensus       125 iH~~l~~~nill~-------~~~~~Kl~~f~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVysfG~~l  195 (259)
T PF07714_consen  125 IHGNLSPSNILLD-------SNGQVKLSDFGLSRPISEKSKY-KNDSSQQLPLRYLAPEVLKDG-EYTKKSDVYSFGMLL  195 (259)
T ss_dssp             EEST-SGGGEEEE-------TTTEEEEESTTTGEETTTSSSE-EESTTSESGGGGS-HHHHHHS-EESHHHHHHHHHHHH
T ss_pred             ccccccccccccc-------cccccccccccccccccccccc-ccccccccccccccccccccc-ccccccccccccccc
Confidence            6999999999999       8999999999999876322111 112334567789999998654 489999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+++ |+.||.+.+..+....+......+                              .....+..+.++|..||..|
T Consensus       196 ~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~C~~~~  245 (259)
T PF07714_consen  196 YEILTLGKFPFSDYDNEEIIEKLKQGQRLP------------------------------IPDNCPKDIYSLIQQCWSHD  245 (259)
T ss_dssp             HHHHTTSSGTTTTSCHHHHHHHHHTTEETT------------------------------SBTTSBHHHHHHHHHHT-SS
T ss_pred             ccccccccccccccccccccccccccccce------------------------------eccchhHHHHHHHHHHcCCC
Confidence            99999 678998877666555553221111                              01235688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       246 p~~RPs~~~i~~  257 (259)
T PF07714_consen  246 PEKRPSFQEILQ  257 (259)
T ss_dssp             GGGS--HHHHHH
T ss_pred             hhhCcCHHHHHh
Confidence            999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG1095|consensus

Probab=99.80  E-value=8.3e-20  Score=175.08  Aligned_cols=132  Identities=20%  Similarity=0.299  Sum_probs=102.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||...|+|++       ....+||+|||+|+.+.....+.. -....-...|||||.+.. ..++.++||||+||++
T Consensus       824 vHRDLAaRNCLL~-------~~r~VKIaDFGlArDiy~~~yyr~-~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVll  894 (1025)
T KOG1095|consen  824 VHRDLAARNCLLD-------ERRVVKIADFGLARDIYDKDYYRK-HGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLL  894 (1025)
T ss_pred             cCcchhhhheeec-------ccCcEEEcccchhHhhhhchheec-cCccccceecCCHHHHhh-cccccccchhhhHHHH
Confidence            6999999999999       789999999999995433221111 011122347999999975 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||+++ |..||++.+..+.+....+.-..+.|                              +.++..+.++|..||+.+
T Consensus       895 WEifslG~~PY~~~~n~~v~~~~~~ggRL~~P------------------------------~~CP~~ly~lM~~CW~~~  944 (1025)
T KOG1095|consen  895 WEIFSLGATPYPSRSNFEVLLDVLEGGRLDPP------------------------------SYCPEKLYQLMLQCWKHD  944 (1025)
T ss_pred             HHHHhCCCCCCCCcchHHHHHHHHhCCccCCC------------------------------CCCChHHHHHHHHHccCC
Confidence            99998 78999999988877755543222222                              245678899999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++||+...+++
T Consensus       945 pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  945 PEDRPSFRTIVE  956 (1025)
T ss_pred             hhhCccHHHHHh
Confidence            999999999886

>KOG1187|consensus

Probab=99.79  E-value=2.1e-20  Score=165.59  Aligned_cols=145  Identities=21%  Similarity=0.288  Sum_probs=92.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCc-ccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .|||||++|||+|       ++...||+|||+|+......  .. ..+. .||.+|+|||.+.. ...+.++||||+|++
T Consensus       199 iHrDiKssNILLD-------~~~~aKlsDFGLa~~~~~~~--~~-~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVv  267 (361)
T KOG1187|consen  199 IHRDIKSSNILLD-------EDFNAKLSDFGLAKLGPEGD--TS-VSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVV  267 (361)
T ss_pred             ecCCCCHHHeeEC-------CCCCEEccCccCcccCCccc--cc-eeeecCCCCccCChhhhcc-CCcCcccccccchHH
Confidence            6999999999999       99999999999997654311  11 1222 89999999999865 348999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCC--CCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP--NADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~ll~~~L~  162 (308)
                      +.|+++|+.+............+ ...       +..+...+....+...-..      ...+  ..-..+..+..+|++
T Consensus       268 llElitgr~~~d~~~~~~~~~l~-~w~-------~~~~~~~~~~eiiD~~l~~------~~~~~~~~~~~~~~~a~~C~~  333 (361)
T KOG1187|consen  268 LLELITGRKAVDQSRPRGELSLV-EWA-------KPLLEEGKLREIVDPRLKE------GEYPDEKEVKKLAELALRCLR  333 (361)
T ss_pred             HHHHHhCCcccCCCCCcccccHH-HHH-------HHHHHCcchhheeCCCccC------CCCChHHHHHHHHHHHHHHcC
Confidence            99999999877543211111000 000       0000000111111100000      0000  112346678889999


Q ss_pred             cCCCCCCCHHHHh
Q psy7274         163 FNPHKRIGVEDAL  175 (308)
Q Consensus       163 ~dP~~R~t~~eil  175 (308)
                      .+|..||++.|++
T Consensus       334 ~~~~~RP~m~~Vv  346 (361)
T KOG1187|consen  334 PDPKERPTMSQVV  346 (361)
T ss_pred             cCCCcCcCHHHHH
Confidence            9999999999974

>KOG4257|consensus

Probab=99.79  E-value=4.8e-20  Score=165.33  Aligned_cols=130  Identities=26%  Similarity=0.424  Sum_probs=104.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      +||||...|||+.       +..++||+|||++|.+.....+..  +...-..-|||||.+ +.+.++.++|||-+||++
T Consensus       513 VHRDIAaRNiLVs-------Sp~CVKLaDFGLSR~~ed~~yYka--S~~kLPIKWmaPESI-NfRrFTtASDVWMFgVCm  582 (974)
T KOG4257|consen  513 VHRDIAARNILVS-------SPQCVKLADFGLSRYLEDDAYYKA--SRGKLPIKWMAPESI-NFRRFTTASDVWMFGVCM  582 (974)
T ss_pred             hhhhhhhhheeec-------Ccceeeecccchhhhccccchhhc--cccccceeecCcccc-chhcccchhhHHHHHHHH
Confidence            6999999999998       889999999999998865433321  222234579999987 456799999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||++. |..||.|-.+.+.+.+|.+.-..|.|                              +++++.+..|+.+||.++
T Consensus       583 WEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P------------------------------~nCPp~LYslmskcWaye  632 (974)
T KOG4257|consen  583 WEILSLGVKPFQGVKNSDVIGHIENGERLPCP------------------------------PNCPPALYSLMSKCWAYE  632 (974)
T ss_pred             HHHHHhcCCccccccccceEEEecCCCCCCCC------------------------------CCCChHHHHHHHHHhccC
Confidence            99886 88999998887777777654444433                              456789999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |.+||+..++.
T Consensus       633 P~kRPrftei~  643 (974)
T KOG4257|consen  633 PSKRPRFTEIK  643 (974)
T ss_pred             cccCCcHHHHH
Confidence            99999976643

>KOG0199|consensus

Probab=99.78  E-value=2.8e-19  Score=162.25  Aligned_cols=136  Identities=19%  Similarity=0.292  Sum_probs=107.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||...|+|+-       +.-.|||||||+.|.+.....+-...........|+|||.+.. ..++.++|+|++||+
T Consensus       233 lvHRDLAARNllla-------sprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVT  304 (1039)
T KOG0199|consen  233 LVHRDLAARNLLLA-------SPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVT  304 (1039)
T ss_pred             hhhhhhhhhhheec-------ccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhh
Confidence            36999999999998       8889999999999988765443221222234557999999865 559999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|||++ |..||.|.....++..|-..-..+.                              .+.+++++.+++..||..
T Consensus       305 iWEMFtyGEePW~G~~g~qIL~~iD~~erLpR------------------------------Pk~csedIY~imk~cWah  354 (1039)
T KOG0199|consen  305 IWEMFTYGEEPWVGCRGIQILKNIDAGERLPR------------------------------PKYCSEDIYQIMKNCWAH  354 (1039)
T ss_pred             HHhhhccCCCCCCCCCHHHHHHhccccccCCC------------------------------CCCChHHHHHHHHHhccC
Confidence            999998 6799999998888887753222121                              134678999999999999


Q ss_pred             CCCCCCCHHHHhcCC
Q psy7274         164 NPHKRIGVEDALAHP  178 (308)
Q Consensus       164 dP~~R~t~~eil~hp  178 (308)
                      +|.+|||...|.+.-
T Consensus       355 ~paDRptFsair~~~  369 (1039)
T KOG0199|consen  355 NPADRPTFSAIREDL  369 (1039)
T ss_pred             CccccccHHHHHHhH
Confidence            999999998775433

>KOG0196|consensus

Probab=99.77  E-value=5.3e-20  Score=168.69  Aligned_cols=132  Identities=20%  Similarity=0.310  Sum_probs=111.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcc--cccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYV--ATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~--gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      -+||||...|||++       ++-.+||+|||++|.+..+....  .++..  -...|.|||.+.. +.++.++||||+|
T Consensus       752 YVHRDLAARNILVN-------snLvCKVsDFGLSRvledd~~~~--ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyG  821 (996)
T KOG0196|consen  752 YVHRDLAARNILVN-------SNLVCKVSDFGLSRVLEDDPEAA--YTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYG  821 (996)
T ss_pred             chhhhhhhhheeec-------cceEEEeccccceeecccCCCcc--ccccCCccceeecChhHhhh-cccCchhhccccc
Confidence            47999999999998       99999999999999875543211  22222  2457999999974 5699999999999


Q ss_pred             HHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          83 CILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        83 ~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ++|||.++ |..||-.-++.+.+..|.+..+.|+|-+                              ++..+..|+..||
T Consensus       822 IVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmD------------------------------CP~aL~qLMldCW  871 (996)
T KOG0196|consen  822 IVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMD------------------------------CPAALYQLMLDCW  871 (996)
T ss_pred             eEEEEecccCCCcccccchHHHHHHHHhccCCCCCCC------------------------------CcHHHHHHHHHHH
Confidence            99999775 9999999999999999999888887744                              4578999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q psy7274         162 TFNPHKRIGVEDALA  176 (308)
Q Consensus       162 ~~dP~~R~t~~eil~  176 (308)
                      ++|-.+||+..||+.
T Consensus       872 qkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  872 QKDRNRRPKFAQIVS  886 (996)
T ss_pred             HHHhhcCCCHHHHHH
Confidence            999999999999874

>KOG0590|consensus

Probab=99.75  E-value=2e-19  Score=168.45  Aligned_cols=151  Identities=21%  Similarity=0.190  Sum_probs=110.7

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      .-.|||||++|+++.       .+|.+||+|||.+..+..+... .....+.+|+..|.|||++.+.......+||||.|
T Consensus       440 GiahrdlK~enll~~-------~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~  512 (601)
T KOG0590|consen  440 GLAHRDLKLENLLVT-------ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCG  512 (601)
T ss_pred             CceeccCccccEEEe-------cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhcc
Confidence            348999999999999       8999999999999877654432 13356789999999999987655456789999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHH-HHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLN-HILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~-~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ++++.|.+|+.||.-....+... .+...                       ...........+...++...+.+|.+||
T Consensus       513 ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~lp~~~~~~~~~~l  569 (601)
T KOG0590|consen  513 IIYICMILGRFPWKVAKKSDNSFKTNNYS-----------------------DQRNIFEGPNRLLSLLPRETRIIIYRML  569 (601)
T ss_pred             ceEEEEecCCCccccccccccchhhhccc-----------------------cccccccChHHHHHhchhhHHHHHHHHc
Confidence            99999999999995443222110 00000                       0000001111122235678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~~  184 (308)
                      +.||.+|+|+++|++.+||+.+.
T Consensus       570 ~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  570 QLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             cCChhheecHHHHhhChHhhhcc
Confidence            99999999999999999998763

>KOG0200|consensus

Probab=99.75  E-value=2.1e-18  Score=163.22  Aligned_cols=130  Identities=20%  Similarity=0.295  Sum_probs=96.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCccc--ccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVA--TRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~g--t~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .||||-..||||.       .+..+||+|||+|+.........  .....|  ...|||||.+.. ..|+.++||||+|+
T Consensus       440 vHRDLAaRNVLi~-------~~~~~kIaDFGlar~~~~~~~y~--~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI  509 (609)
T KOG0200|consen  440 VHRDLAARNVLIT-------KNKVIKIADFGLARDHYNKDYYR--TKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGI  509 (609)
T ss_pred             cchhhhhhhEEec-------CCCEEEEccccceeccCCCCceE--ecCCCCccceeecCHHHhcc-CcccccchhhHHHH
Confidence            6999999999998       88899999999999754432221  111122  235999999875 56999999999999


Q ss_pred             HHHHHhh-CCCCCCCCC-HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          84 ILAEMIS-NRPIFPGKH-YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        84 il~ell~-g~~pf~~~~-~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ++||+++ |..|++|.. ..+.+..+.......                              ....++.++.++++.||
T Consensus       510 ~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~------------------------------~P~~c~~eiY~iM~~CW  559 (609)
T KOG0200|consen  510 LLWEIFTLGGTPYPGIPPTEELLEFLKEGNRME------------------------------QPEHCSDEIYDLMKSCW  559 (609)
T ss_pred             HHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCC------------------------------CCCCCCHHHHHHHHHHh
Confidence            9999998 779998844 333333332211111                              11246789999999999


Q ss_pred             ccCCCCCCCHHHHh
Q psy7274         162 TFNPHKRIGVEDAL  175 (308)
Q Consensus       162 ~~dP~~R~t~~eil  175 (308)
                      ..+|++||+..++.
T Consensus       560 ~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  560 NADPEDRPTFSECV  573 (609)
T ss_pred             CCCcccCCCHHHHH
Confidence            99999999988875

>KOG4250|consensus

Probab=99.73  E-value=5.7e-19  Score=160.70  Aligned_cols=84  Identities=27%  Similarity=0.389  Sum_probs=69.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      +||||||.||++-.   ..++.-..||+|||.|+..+.+.    .+++.+||+.|.+||++-....|+..+|.||+||++
T Consensus       142 vHRDlKP~NIvl~~---Gedgq~IyKLtDfG~Arel~d~s----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvtl  214 (732)
T KOG4250|consen  142 VHRDLKPGNIVLQI---GEDGQSIYKLTDFGAARELDDNS----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTL  214 (732)
T ss_pred             eeccCCCCcEEEee---cCCCceEEeeecccccccCCCCC----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHH
Confidence            79999999999852   11123336999999999887543    368889999999999986446699999999999999


Q ss_pred             HHHhhCCCCCC
Q psy7274          86 AEMISNRPIFP   96 (308)
Q Consensus        86 ~ell~g~~pf~   96 (308)
                      |+++||..||-
T Consensus       215 Y~caTG~lPF~  225 (732)
T KOG4250|consen  215 YECATGELPFI  225 (732)
T ss_pred             HHHhccCCCCC
Confidence            99999998884

>KOG0603|consensus

Probab=99.73  E-value=2e-18  Score=155.77  Aligned_cols=127  Identities=28%  Similarity=0.439  Sum_probs=103.7

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      +..|||+|++||+++       .+|++|+.|||+++..-...       ..|||..|||||++.   +...++|+||+|+
T Consensus       117 ~iiyrd~k~enilld-------~~Ghi~~tdfglske~v~~~-------~~cgt~eymApEI~~---gh~~a~D~ws~gv  179 (612)
T KOG0603|consen  117 GIAYRDYKLENVLLL-------LEGHIKLTDFGLSKEAVKEK-------IACGTYEYRAPEIIN---GHLSAADWWSFGV  179 (612)
T ss_pred             HHHHhcccccceeec-------ccCccccCCchhhhHhHhhh-------hcccchhhhhhHhhh---ccCCcccchhhhh
Confidence            457899999999999       99999999999999764332       129999999999975   4789999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++||++|..+|.+    +....|.. .++.|                                ..++..+.+++..++.
T Consensus       180 l~felltg~~pf~~----~~~~~Il~~~~~~p--------------------------------~~l~~~a~~~~~~l~~  223 (612)
T KOG0603|consen  180 LAFELLTGTLPFGG----DTMKRILKAELEMP--------------------------------RELSAEARSLFRQLFK  223 (612)
T ss_pred             hHHHHhhCCCCCch----HHHHHHhhhccCCc--------------------------------hhhhHHHHHHHHHHHh
Confidence            99999999999987    34444432 11111                                2356889999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCccccc
Q psy7274         163 FNPHKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t-----~~eil~hp~f~~~  183 (308)
                      .+|..|..     +.++++|+||..+
T Consensus       224 r~p~nrLg~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  224 RNPENRLGAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             hCHHHHhccCcchhHHHhccchheee
Confidence            99999986     5799999999774

>KOG0194|consensus

Probab=99.72  E-value=1.4e-18  Score=155.81  Aligned_cols=129  Identities=19%  Similarity=0.290  Sum_probs=99.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||-..|+|++       .++.+||+|||+|+...... ...  ....-...|+|||.+..+ -|+.++||||+||++
T Consensus       284 IHRDIAARNcL~~-------~~~~vKISDFGLs~~~~~~~-~~~--~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~  352 (474)
T KOG0194|consen  284 IHRDIAARNCLYS-------KKGVVKISDFGLSRAGSQYV-MKK--FLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLL  352 (474)
T ss_pred             cchhHhHHHheec-------CCCeEEeCccccccCCccee-ecc--ccccCcceecChhhhccC-ccccccchhheeeeE
Confidence            6999999999998       77888999999998654111 110  011245679999998765 699999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ||+++ |..||+|....+....|.. ....+.+                              ...+..+..++.+|+..
T Consensus       353 ~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~------------------------------~~~p~~~~~~~~~c~~~  402 (474)
T KOG0194|consen  353 WEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP------------------------------SKTPKELAKVMKQCWKK  402 (474)
T ss_pred             EeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC------------------------------CCCHHHHHHHHHHhccC
Confidence            99999 7889999998877777732 2222222                              13457788999999999


Q ss_pred             CCCCCCCHHHHh
Q psy7274         164 NPHKRIGVEDAL  175 (308)
Q Consensus       164 dP~~R~t~~eil  175 (308)
                      +|++|+|+.++.
T Consensus       403 ~p~~R~tm~~i~  414 (474)
T KOG0194|consen  403 DPEDRPTMSTIK  414 (474)
T ss_pred             ChhhccCHHHHH
Confidence            999999998875

>KOG1094|consensus

Probab=99.72  E-value=8.8e-18  Score=149.89  Aligned_cols=139  Identities=16%  Similarity=0.162  Sum_probs=103.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||.+.|+|++       .++++||+|||++|.+-....+. .-...+-...|||+|.++.++ ++.++|+|++|+++
T Consensus       659 VHrd~a~rNcLv~-------~e~~iKiadfgmsR~lysg~yy~-vqgr~vlpiRwmawEsillgk-FttaSDvWafgvTl  729 (807)
T KOG1094|consen  659 VHRDLATRNCLVD-------GEFTIKIADFGMSRNLYSGDYYR-VQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTL  729 (807)
T ss_pred             hhccccccceeec-------CcccEEecCcccccccccCCcee-eecceeeeeeehhHHHHHhcc-ccchhhhhhhHHHH
Confidence            6999999999999       99999999999999664432221 123345567899999998755 99999999999999


Q ss_pred             HHHhh--CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          86 AEMIS--NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        86 ~ell~--g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ||+++  ...||..-.+.+........+..+....                       .-...+-++..+.++|.+|+..
T Consensus       730 wE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~-----------------------~l~~P~~cp~~lyelml~Cw~~  786 (807)
T KOG1094|consen  730 WEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV-----------------------VLSRPPACPQGLYELMLRCWRR  786 (807)
T ss_pred             HHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce-----------------------eccCCCcCcHHHHHHHHHHhch
Confidence            99875  5678876665555544444433332211                       1122334678899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      +..+||+.+++..
T Consensus       787 es~~RPsFe~lh~  799 (807)
T KOG1094|consen  787 ESEQRPSFEQLHL  799 (807)
T ss_pred             hhhcCCCHHHHHH
Confidence            9999999999853

>KOG4278|consensus

Probab=99.72  E-value=8.3e-18  Score=151.15  Aligned_cols=130  Identities=17%  Similarity=0.291  Sum_probs=102.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||...|.|+.       .+..|||+|||++|.+..+.. .. .....-..-|.|||.+.- ..++.++|||++||+|
T Consensus       387 IHRDLAARNCLVg-------EnhiVKvADFGLsRlMtgDTY-TA-HAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLL  456 (1157)
T KOG4278|consen  387 IHRDLAARNCLVG-------ENHIVKVADFGLSRLMTGDTY-TA-HAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLL  456 (1157)
T ss_pred             hhhhhhhhhcccc-------ccceEEeeccchhhhhcCCce-ec-ccCccCcccccCcccccc-cccccchhhHHHHHHH
Confidence            5999999999998       889999999999998764321 11 112223457999998864 4489999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||+.| |-.||+|.+....+.++......-.                              ..++++.+..||+.||+++
T Consensus       457 WEIATYGMsPYPGidlSqVY~LLEkgyRM~~------------------------------PeGCPpkVYeLMraCW~Ws  506 (1157)
T KOG4278|consen  457 WEIATYGMSPYPGIDLSQVYGLLEKGYRMDG------------------------------PEGCPPKVYELMRACWNWS  506 (1157)
T ss_pred             HHHHhcCCCCCCCccHHHHHHHHhccccccC------------------------------CCCCCHHHHHHHHHHhcCC
Confidence            99998 8899999987777776654332211                              1356789999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |.+||+..|+-
T Consensus       507 PsDRPsFaeiH  517 (1157)
T KOG4278|consen  507 PSDRPSFAEIH  517 (1157)
T ss_pred             cccCccHHHHH
Confidence            99999988874

>KOG0576|consensus

Probab=99.70  E-value=2.3e-17  Score=149.28  Aligned_cols=164  Identities=25%  Similarity=0.308  Sum_probs=117.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh--CCCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~~~DiWSlG   82 (308)
                      -.|||||-.|||++       ..|.+|++|||.+..+......   ..+++||++|||||+-.  ...+|+..+|+|++|
T Consensus       133 k~hRdiKGanillt-------d~gDvklaDfgvsaqitati~K---rksfiGtpywmapEvaaverkggynqlcdiwa~g  202 (829)
T KOG0576|consen  133 KIHRDIKGANILLT-------DEGDVKLADFGVSAQITATIAK---RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG  202 (829)
T ss_pred             cccccccccceeec-------ccCceeecccCchhhhhhhhhh---hhcccCCccccchhHHHHHhcccccccccccccc
Confidence            38999999999999       9999999999999887654322   35679999999999863  224599999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +...|+---++|.........+.++....-.|+.                   .+.+       ...++.+.+|++.+|.
T Consensus       203 itAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~-------------------lkDk-------~kws~~fh~fvK~alt  256 (829)
T KOG0576|consen  203 ITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT-------------------LKDK-------TKWSEFFHNFVKGALT  256 (829)
T ss_pred             cchhhhhhcCCcccccchHHHHHHhhccCCCCCc-------------------ccCC-------ccchHHHHHHHHHHhc
Confidence            9999988777766555544444444332221111                   0111       1246889999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCcc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKR  208 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r  208 (308)
                      .+|++|||++.+|.|||....    -+..-..+.+.+....++..+
T Consensus       257 knpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~  298 (829)
T KOG0576|consen  257 KNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVR  298 (829)
T ss_pred             CCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCccc
Confidence            999999999999999999764    111222455555555554433

>KOG2052|consensus

Probab=99.68  E-value=2.9e-17  Score=142.38  Aligned_cols=146  Identities=21%  Similarity=0.257  Sum_probs=94.4

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCC---CC--chhh
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKG---YT--KSID   77 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~---~~--~~~D   77 (308)
                      +-.|||||..|||+.       +++...|+|+|+|..+...... ....+..|||-.|||||++-....   +.  ..+|
T Consensus       336 aIAHRDlKSKNILVK-------kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~AD  408 (513)
T KOG2052|consen  336 AIAHRDLKSKNILVK-------KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRAD  408 (513)
T ss_pred             hhhccccccccEEEc-------cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHH
Confidence            447999999999999       9999999999999987655322 223467799999999999853221   11  3589


Q ss_pred             HHHHHHHHHHHhhC----------CCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCC
Q psy7274          78 IWSVGCILAEMISN----------RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP  147 (308)
Q Consensus        78 iWSlG~il~ell~g----------~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (308)
                      |||+|.++||++.+          +.||.+-.           ...|+-+++.++...        ...++..+..+...
T Consensus       409 IYafgLVlWEiarRc~~ggi~eey~~Pyyd~V-----------p~DPs~eeMrkVVCv--------~~~RP~ipnrW~s~  469 (513)
T KOG2052|consen  409 IYAFGLVLWEIARRCESGGIVEEYQLPYYDVV-----------PSDPSFEEMRKVVCV--------QKLRPNIPNRWKSD  469 (513)
T ss_pred             HHHHHHHHHHHHHHhhcCCEehhhcCCcccCC-----------CCCCCHHHHhcceee--------cccCCCCCcccccC
Confidence            99999999999864          24443321           122333333322211        11112222111111


Q ss_pred             CCChhHHHHHHHhcccCCCCCCCHHHHh
Q psy7274         148 NADPNALDLLGKMLTFNPHKRIGVEDAL  175 (308)
Q Consensus       148 ~~s~~~~~ll~~~L~~dP~~R~t~~eil  175 (308)
                      .+-..+..+|+.||..||.-|.||-.+.
T Consensus       470 ~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  470 PALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             HHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            1223456789999999999999986553

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.65  E-value=1.2e-16  Score=160.38  Aligned_cols=142  Identities=16%  Similarity=0.178  Sum_probs=88.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++..+++ ||.+......       ....||..|+|||++.+ ..++.++||||+||++
T Consensus       805 iH~dlkp~Nil~~-------~~~~~~~~-~~~~~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl  868 (968)
T PLN00113        805 VVGNLSPEKIIID-------GKDEPHLR-LSLPGLLCTD-------TKCFISSAYVAPETRET-KDITEKSDIYGFGLIL  868 (968)
T ss_pred             ecCCCCHHhEEEC-------CCCceEEE-eccccccccC-------CCccccccccCcccccC-CCCCcccchhhHHHHH
Confidence            6999999999998       77777765 6665543211       23378899999999764 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHH-HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYL-DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++|+.||...... ..+..........          .....+..... .....   .......++.+++.+|++.|
T Consensus       869 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~---~~~~~~~~~~~l~~~Cl~~~  934 (968)
T PLN00113        869 IELLTGKSPADAEFGVHGSIVEWARYCYSD----------CHLDMWIDPSI-RGDVS---VNQNEIVEVMNLALHCTATD  934 (968)
T ss_pred             HHHHhCCCCCCcccCCCCcHHHHHHHhcCc----------cchhheeCccc-cCCCC---ccHHHHHHHHHHHHhhCcCC
Confidence            9999999998432110 0000000000000          00000000000 00000   00011235778999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||++|+++.
T Consensus       935 P~~RPt~~evl~~  947 (968)
T PLN00113        935 PTARPCANDVLKT  947 (968)
T ss_pred             chhCcCHHHHHHH
Confidence            9999999999754

>KOG1033|consensus

Probab=99.63  E-value=1.8e-16  Score=140.61  Aligned_cols=134  Identities=27%  Similarity=0.435  Sum_probs=94.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC---CCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH---DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~---~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      ..|||+||.||...       .++.+||+|||+........   ......+..+||.+||+||.+.+ ..|+.++|||||
T Consensus       377 ~ihrdlkp~nif~~-------~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaL  448 (516)
T KOG1033|consen  377 LIHRDLKPSNIFFS-------DDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYAL  448 (516)
T ss_pred             chhhhccccccccc-------cchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhH
Confidence            46999999999998       78899999999987654432   00112467799999999999975 559999999999


Q ss_pred             HHHHHHHhhC-CCCCCCCCHHHHHHHHHHh-hCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          82 GCILAEMISN-RPIFPGKHYLDQLNHILGI-LGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        82 G~il~ell~g-~~pf~~~~~~~~l~~i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |++++|++.- ...|      +....+..+ -|..++..+.                            -.+....|+.+
T Consensus       449 Glil~EL~~~f~T~~------er~~t~~d~r~g~ip~~~~~----------------------------d~p~e~~ll~~  494 (516)
T KOG1033|consen  449 GLILAELLIQFSTQF------ERIATLTDIRDGIIPPEFLQ----------------------------DYPEEYTLLQQ  494 (516)
T ss_pred             HHHHHHHHHHhccHH------HHHHhhhhhhcCCCChHHhh----------------------------cCcHHHHHHHH
Confidence            9999999972 1111      111111111 1112222221                            13667899999


Q ss_pred             hcccCCCCCCCHHHHhcCCcc
Q psy7274         160 MLTFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~hp~f  180 (308)
                      ||...|.+||++.+.-.|.|.
T Consensus       495 lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  495 LLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             hcCCCcccCchHHHHhhhhhc
Confidence            999999999988777767664

>KOG1025|consensus

Probab=99.58  E-value=5.1e-15  Score=137.05  Aligned_cols=131  Identities=18%  Similarity=0.259  Sum_probs=99.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||-..|+|+.       +..++||+|||+|+........-. .........|+|=|.+.. ..|+.++||||+||++
T Consensus       820 VHrdLaaRNVLVk-------sP~hvkitdfgla~ll~~d~~ey~-~~~gK~pikwmale~i~~-~~~thqSDVWsfGVti  890 (1177)
T KOG1025|consen  820 VHRDLAARNVLVK-------SPNHVKITDFGLAKLLAPDEKEYS-APGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTI  890 (1177)
T ss_pred             hhhhhhhhheeec-------CCCeEEEEecchhhccCccccccc-ccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhH
Confidence            6999999999998       899999999999998876543221 122233457888898864 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ||++| |..|+.|....+.-..+.....                     ++         ..|..+-++.-++.+||..|
T Consensus       891 WElmTFGa~Py~gi~~~eI~dlle~geR---------------------Ls---------qPpiCtiDVy~~mvkCwmid  940 (1177)
T KOG1025|consen  891 WELMTFGAKPYDGIPAEEIPDLLEKGER---------------------LS---------QPPICTIDVYMVMVKCWMID  940 (1177)
T ss_pred             HHHHhcCCCccCCCCHHHhhHHHhcccc---------------------CC---------CCCCccHHHHHHHHHHhccC
Confidence            99998 8899988876554443322111                     11         12456788999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      +..||+++++.
T Consensus       941 ~~~rp~fkel~  951 (1177)
T KOG1025|consen  941 ADSRPTFKELA  951 (1177)
T ss_pred             cccCccHHHHH
Confidence            99999987653

>KOG1024|consensus

Probab=99.57  E-value=6.2e-15  Score=126.26  Aligned_cols=132  Identities=17%  Similarity=0.219  Sum_probs=100.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|.||...|.+||       +.-++||+|=.++|..-+...+.- =...--...||++|.+.+ ..|+.++|+||+|+++
T Consensus       418 iHkDiAaRNCvId-------d~LqVkltDsaLSRDLFP~DYhcL-GDnEnRPvkWMslEal~n-~~yssasDvWsfGVll  488 (563)
T KOG1024|consen  418 IHKDIAARNCVID-------DQLQVKLTDSALSRDLFPGDYHCL-GDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLL  488 (563)
T ss_pred             ccchhhhhcceeh-------hheeEEeccchhccccCccccccc-CCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHH
Confidence            6999999999999       889999999999997654322110 011112447999999875 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.|+-..+..+....+........|                              -+++.++..++.-||...
T Consensus       489 WELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP------------------------------~NCPDeLf~vMacCWall  538 (563)
T KOG1024|consen  489 WELMTLGKLPYAEIDPFEMEHYLKDGYRLAQP------------------------------FNCPDELFTVMACCWALL  538 (563)
T ss_pred             HHHHhcCCCCccccCHHHHHHHHhccceecCC------------------------------CCCcHHHHHHHHHHHhcC
Confidence            99998 88899877777666555433221111                              156789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++||+.+|+..
T Consensus       539 peeRPsf~Qlv~  550 (563)
T KOG1024|consen  539 PEERPSFSQLVI  550 (563)
T ss_pred             cccCCCHHHHHH
Confidence            999999998763

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.55  E-value=1.1e-14  Score=119.20  Aligned_cols=102  Identities=34%  Similarity=0.586  Sum_probs=84.3

Q ss_pred             CCCCCCCCCCcccCccccccCC-CCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYD-PADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~-~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.|+||+|.||+++       . ++.++|+|||.+........   ......++..|++||.+.....++.+.|+|++|+
T Consensus       113 ~~H~dl~~~ni~~~-------~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~  182 (215)
T cd00180         113 IIHRDLKPENILLD-------SDNGKVKLADFGLSKLLTSDKS---LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGV  182 (215)
T ss_pred             eeccCCCHhhEEEe-------CCCCcEEEecCCceEEccCCcc---hhhcccCCCCccChhHhcccCCCCchhhhHHHHH
Confidence            36999999999998       6 78999999999987654321   1233467889999998865326889999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++++                                                              ..+.+++.+|+..
T Consensus       183 ~~~~l--------------------------------------------------------------~~~~~~l~~~l~~  200 (215)
T cd00180         183 ILYEL--------------------------------------------------------------PELKDLIRKMLQK  200 (215)
T ss_pred             HHHHH--------------------------------------------------------------HHHHHHHHHHhhC
Confidence            99998                                                              1467899999999


Q ss_pred             CCCCCCCHHHHhcCC
Q psy7274         164 NPHKRIGVEDALAHP  178 (308)
Q Consensus       164 dP~~R~t~~eil~hp  178 (308)
                      +|.+|+++.++++|+
T Consensus       201 ~p~~R~~~~~l~~~~  215 (215)
T cd00180         201 DPEKRPSAKEILEHL  215 (215)
T ss_pred             CcccCcCHHHHhhCC
Confidence            999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1240|consensus

Probab=99.52  E-value=1.9e-14  Score=137.10  Aligned_cols=137  Identities=28%  Similarity=0.348  Sum_probs=90.1

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC----CccCcccccccchhhHhhCCC---------
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG----FLTEYVATRWYRAPEIMLNSK---------   70 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~----~~~~~~gt~~y~aPE~l~~~~---------   70 (308)
                      .-+|+|||.+||||+       +-+-+.|+||..-+-.--+.+...    ++.+..--..|.|||.+....         
T Consensus       140 gVcHGDIKsENILiT-------SWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~  212 (1431)
T KOG1240|consen  140 GVCHGDIKSENILIT-------SWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDA  212 (1431)
T ss_pred             CccccccccceEEEe-------eechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcc
Confidence            348999999999999       778899999986553211111111    222223334799999986421         


Q ss_pred             C-CCchhhHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCC
Q psy7274          71 G-YTKSIDIWSVGCILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN  148 (308)
Q Consensus        71 ~-~~~~~DiWSlG~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (308)
                      . .+++.||+|+||+++|+++ |+++|.    ..|+-..... +.-.++..-..                         -
T Consensus       213 ~~L~paMDIFS~GCViaELf~Eg~PlF~----LSQL~aYr~~-~~~~~e~~Le~-------------------------I  262 (1431)
T KOG1240|consen  213 PLLTPAMDIFSAGCVIAELFLEGRPLFT----LSQLLAYRSG-NADDPEQLLEK-------------------------I  262 (1431)
T ss_pred             cccChhhhhhhhhHHHHHHHhcCCCccc----HHHHHhHhcc-CccCHHHHHHh-------------------------C
Confidence            1 5678999999999999998 689983    1122111110 01111111100                         1


Q ss_pred             CChhHHHHHHHhcccCCCCCCCHHHHhcC
Q psy7274         149 ADPNALDLLGKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       149 ~s~~~~~ll~~~L~~dP~~R~t~~eil~h  177 (308)
                      -+...+.||..|++.||++|++|++.|+.
T Consensus       263 ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  263 EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            24578999999999999999999999875

>KOG1345|consensus

Probab=99.51  E-value=4.7e-15  Score=121.35  Aligned_cols=143  Identities=21%  Similarity=0.238  Sum_probs=96.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC----CCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----KGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiWSl   81 (308)
                      +|||||.+||||-.     ....++||||||+.+..+.....      .--+..|.+||++..-    ....+..|+|.+
T Consensus       143 VHRdlK~eNiLif~-----~df~rvKlcDFG~t~k~g~tV~~------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~Wqf  211 (378)
T KOG1345|consen  143 VHRDLKAENILIFD-----ADFYRVKLCDFGLTRKVGTTVKY------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQF  211 (378)
T ss_pred             hhcccccceEEEec-----CCccEEEeeecccccccCceehh------hhhhcccCCcHHHhhccccceEecccccchhe
Confidence            69999999999861     13357999999999876543221      2235578999987532    124678999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |++++.+++|+.||+.....+           ++-..+..        |....    .......|.-.|+.+..+.++-|
T Consensus       212 GIi~f~cltG~~PWQka~~~d-----------~~Y~~~~~--------w~~rk----~~~~P~~F~~fs~~a~r~Fkk~l  268 (378)
T KOG1345|consen  212 GIIFFYCLTGKFPWQKASIMD-----------KPYWEWEQ--------WLKRK----NPALPKKFNPFSEKALRLFKKSL  268 (378)
T ss_pred             eeeeeeeecCCCcchhhhccC-----------chHHHHHH--------Hhccc----CccCchhhcccCHHHHHHHHHhc
Confidence            999999999999997432211           11111111        11111    11223345567899999999999


Q ss_pred             ccCCCCC---CCHHHHhcCCcccc
Q psy7274         162 TFNPHKR---IGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R---~t~~eil~hp~f~~  182 (308)
                      ..++.+|   .++.......|...
T Consensus       269 t~~~~drcki~~~kk~rk~~w~E~  292 (378)
T KOG1345|consen  269 TPRFKDRCKIWTAKKMRKCLWKEK  292 (378)
T ss_pred             CCcccccchhHHHHHHHHHHHHHh
Confidence            9999999   66666666777654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.50  E-value=9.4e-14  Score=121.25  Aligned_cols=150  Identities=31%  Similarity=0.432  Sum_probs=105.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCC---CCccCcccccccchhhHhhCC--CCCCchhhH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHT---GFLTEYVATRWYRAPEIMLNS--KGYTKSIDI   78 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~--~~~~~~~Di   78 (308)
                      -.||||||+||+++       ..+ .++++|||.++.........   ......+||..|+|||.+.+.  ..++...|+
T Consensus       122 ~~hrd~kp~nil~~-------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~  194 (384)
T COG0515         122 IIHRDIKPENILLD-------RDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDI  194 (384)
T ss_pred             eeccCCCHHHeeec-------CCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhH
Confidence            36999999999998       666 69999999998654432211   124677999999999998753  468899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHHhhCCC-ChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHH
Q psy7274          79 WSVGCILAEMISNRPIFPGKHY---LDQLNHILGILGSP-TPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNAL  154 (308)
Q Consensus        79 WSlG~il~ell~g~~pf~~~~~---~~~l~~i~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  154 (308)
                      ||+|++++++++|..||.....   ...........+.+ ......                 ....     ......+.
T Consensus       195 ~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-----~~~~~~~~  252 (384)
T COG0515         195 WSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLS-----------------PSNP-----ELISKAAS  252 (384)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccC-----------------cccc-----chhhHHHH
Confidence            9999999999999999877663   22322222222221 000000                 0000     11235789


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         155 DLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       155 ~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      +++.+++..+|..|.++.+...+++....
T Consensus       253 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         253 DLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             HHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            99999999999999999998888666543

>KOG1152|consensus

Probab=99.48  E-value=9.7e-15  Score=130.55  Aligned_cols=79  Identities=27%  Similarity=0.407  Sum_probs=69.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||||-+|+.++       ++|.+||+|||.|.....     +....++||..|.|||++-|....+...|||++|+++
T Consensus       692 vhrdikdenvivd-------~~g~~klidfgsaa~~ks-----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgill  759 (772)
T KOG1152|consen  692 VHRDIKDENVIVD-------SNGFVKLIDFGSAAYTKS-----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILL  759 (772)
T ss_pred             eecccccccEEEe-------cCCeEEEeeccchhhhcC-----CCcceeeeeccccchhhhCCCccCCCcchhhhhhhee
Confidence            6999999999999       999999999999986543     3367789999999999987767678999999999999


Q ss_pred             HHHhhCCCCCC
Q psy7274          86 AEMISNRPIFP   96 (308)
Q Consensus        86 ~ell~g~~pf~   96 (308)
                      |.++....||.
T Consensus       760 ytivykenpyy  770 (772)
T KOG1152|consen  760 YTIVYKENPYY  770 (772)
T ss_pred             eEEEeccCCCc
Confidence            99998888774

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.45  E-value=1.2e-13  Score=114.69  Aligned_cols=95  Identities=31%  Similarity=0.489  Sum_probs=73.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|+||+|.||+++       .++.++|+|||++........  .......++..|++||.+.+...++.++|+|++||+
T Consensus       119 i~h~di~~~ni~v~-------~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~  189 (225)
T smart00221      119 IVHRDLKPENILLG-------MDGLVKLADFGLARFIHRDLA--ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVI  189 (225)
T ss_pred             eecCCCCHHHEEEc-------CCCCEEEeeCceeeEecCccc--ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHH
Confidence            37999999999999       779999999999987654320  012445788899999987444557889999999999


Q ss_pred             HHHHhhCCCCCCC-CCHH-HHHHHHH
Q psy7274          85 LAEMISNRPIFPG-KHYL-DQLNHIL  108 (308)
Q Consensus        85 l~ell~g~~pf~~-~~~~-~~l~~i~  108 (308)
                      +++|++|+.||.+ .+.. ...+.+.
T Consensus       190 ~~~l~~g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      190 LYELLWGPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             HHHHHHCCCCccccchhHHHHHHHHh
Confidence            9999999999977 4433 4444443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.39  E-value=1.6e-13  Score=116.45  Aligned_cols=116  Identities=19%  Similarity=0.135  Sum_probs=75.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-------CCCCchhh
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-------KGYTKSID   77 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~~~D   77 (308)
                      -.|+||||+|++++       .+|.+.|+||+.....+...      .....+..|.+||+....       ..++.+.|
T Consensus       166 lVHgdi~~~nfll~-------~~G~v~Lg~F~~~~r~g~~~------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~D  232 (288)
T PF14531_consen  166 LVHGDIKPENFLLD-------QDGGVFLGDFSSLVRAGTRY------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATD  232 (288)
T ss_dssp             EEEST-SGGGEEE--------TTS-EEE--GGGEEETTEEE------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHH
T ss_pred             eEecccceeeEEEc-------CCCCEEEcChHHHeecCcee------eccCCCcccCChhhhhhhcccCcccceeeeccC
Confidence            46999999999999       99999999999887654321      113445789999976432       23788999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          78 IWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        78 iWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      .|++|+++|.+.+|..||.......           ..+.                       .|.... ++++.++.||
T Consensus       233 aW~LG~~ly~lWC~~lPf~~~~~~~-----------~~~~-----------------------~f~~C~-~~Pe~v~~LI  277 (288)
T PF14531_consen  233 AWQLGITLYSLWCGRLPFGLSSPEA-----------DPEW-----------------------DFSRCR-DMPEPVQFLI  277 (288)
T ss_dssp             HHHHHHHHHHHHHSS-STCCCGGGS-----------TSGG-----------------------GGTTSS----HHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCCCCccc-----------cccc-----------------------cchhcC-CcCHHHHHHH
Confidence            9999999999999999996543110           0000                       122223 6789999999


Q ss_pred             HHhcccCCCCC
Q psy7274         158 GKMLTFNPHKR  168 (308)
Q Consensus       158 ~~~L~~dP~~R  168 (308)
                      .+||+.||.+|
T Consensus       278 ~~lL~~~~~~R  288 (288)
T PF14531_consen  278 RGLLQRNPEDR  288 (288)
T ss_dssp             HHHT-SSGGGS
T ss_pred             HHHccCCcccC
Confidence            99999999987

>KOG0590|consensus

Probab=99.31  E-value=6.2e-13  Score=125.05  Aligned_cols=146  Identities=24%  Similarity=0.314  Sum_probs=108.8

Q ss_pred             cCCCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCCCccCccc-ccccchhhHhhCCCCCCchhhHHHH
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTGFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~~~~~~~g-t~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      ...||||||+|.+++       .++ .+|++|||+|..+.............+| +..|.|||...+........|+||.
T Consensus       144 ~~~h~~ikP~n~~l~-------~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~  216 (601)
T KOG0590|consen  144 GVTHRDIKPSNSLLD-------ESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSL  216 (601)
T ss_pred             ccccCCCCCccchhc-------cCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccc
Confidence            357999999999999       777 9999999999987652222233566788 9999999998764456889999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |+++..+++|..++......+..              ..        .+.    ......-...+..++..+.+++.+++
T Consensus       217 g~~l~~~~~g~~p~~~~~~~~~~--------------~~--------~~~----~~~~~~~~~~~~~~~~~~~~~l~k~l  270 (601)
T KOG0590|consen  217 GIVLSAMLTGELPWDFPSRKDGR--------------YS--------SWK----SNKGRFTQLPWNSISDQAHDLLHKIL  270 (601)
T ss_pred             cccccccccCCCCcccccccccc--------------ce--------eec----ccccccccCccccCChhhhhcccccc
Confidence            99999999999887544322100              00        000    00000012224467889999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ..+|..|.+.+++..++|+..
T Consensus       271 ~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  271 KENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cCCchhccccccccccccccc
Confidence            999999999999999999987

>KOG4158|consensus

Probab=99.30  E-value=6.5e-12  Score=108.36  Aligned_cols=134  Identities=19%  Similarity=0.239  Sum_probs=87.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC---CCCCCccCcccccccchhhHhhCCCC-----CCchhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH---DHTGFLTEYVATRWYRAPEIMLNSKG-----YTKSID   77 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~---~~~~~~~~~~gt~~y~aPE~l~~~~~-----~~~~~D   77 (308)
                      .|||+|.+||||.   .+.+.-..+.|+|||.+-.-....   ...+......|.-.-||||+.....+     .-.++|
T Consensus       363 AhRDlKSDNiL~E---lddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD  439 (598)
T KOG4158|consen  363 AHRDLKSDNILLE---LDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKAD  439 (598)
T ss_pred             hhhcccccceEEE---ecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhh
Confidence            6999999999986   222344557899999876433211   11111123356778899998743211     114789


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          78 IWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        78 iWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      .|+.|.+.||+++...||.+......-                      .+.|..       ..+..+...+++.+++|+
T Consensus       440 ~WA~GalaYEIfg~~NPFY~rGem~L~----------------------~r~Yqe-------~qLPalp~~vpp~~rqlV  490 (598)
T KOG4158|consen  440 TWAAGALAYEIFGRSNPFYKRGEMLLD----------------------TRTYQE-------SQLPALPSRVPPVARQLV  490 (598)
T ss_pred             hhhhhhhHHHHhccCCcccccchheec----------------------hhhhhh-------hhCCCCcccCChHHHHHH
Confidence            999999999999999999774421110                      001111       011122335678999999


Q ss_pred             HHhcccCCCCCCCH
Q psy7274         158 GKMLTFNPHKRIGV  171 (308)
Q Consensus       158 ~~~L~~dP~~R~t~  171 (308)
                      ..+|+.||++|++.
T Consensus       491 ~~lL~r~pskRvsp  504 (598)
T KOG4158|consen  491 FDLLKRDPSKRVSP  504 (598)
T ss_pred             HHHhcCCccccCCc
Confidence            99999999999994

>KOG0606|consensus

Probab=99.25  E-value=1.8e-11  Score=116.98  Aligned_cols=142  Identities=25%  Similarity=0.433  Sum_probs=107.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCC--------C------------------CCC--CCccCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPE--------H------------------DHT--GFLTEYVAT   57 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~--------~------------------~~~--~~~~~~~gt   57 (308)
                      .|||+||.|+|+.       .+++.+++|||.......-        .                  ...  ..-...+||
T Consensus       926 ~h~~~~p~~~l~~-------~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t  998 (1205)
T KOG0606|consen  926 KHRDLKPDSLLIA-------YDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGT  998 (1205)
T ss_pred             hcccccccchhhc-------ccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCC
Confidence            7999999999998       8999999999944322110        0                  000  012345789


Q ss_pred             cccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCC
Q psy7274          58 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFK  137 (308)
Q Consensus        58 ~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  137 (308)
                      +-|.+||.+++ ...+.++|+|++|++++|.++|.++|........+..|.+                            
T Consensus       999 ~~~laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~---------------------------- 1049 (1205)
T KOG0606|consen  999 PDYLAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILN---------------------------- 1049 (1205)
T ss_pred             CcccCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhcccc----------------------------
Confidence            99999999876 5588999999999999999999999988776555543322                            


Q ss_pred             CCCCccccCCCCChhHHHHHHHhcccCCCCCCCHH---HHhcCCccccc
Q psy7274         138 PKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVE---DALAHPYLEQY  183 (308)
Q Consensus       138 ~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~---eil~hp~f~~~  183 (308)
                      ...+|..-....+..+.+++..+|..+|.+|.++.   ++-.|+||+..
T Consensus      1050 ~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1050 RDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             CCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence            12223233335688999999999999999999976   89999999764

>KOG1023|consensus

Probab=98.98  E-value=5.3e-10  Score=101.26  Aligned_cols=138  Identities=21%  Similarity=0.249  Sum_probs=91.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC--C----CCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK--G----YTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~----~~~~~DiW   79 (308)
                      .|+.++..|.++|       ....+||+|||+............ .....-...|.|||++.+..  .    .+.+.|+|
T Consensus        71 ~hg~l~s~nClvd-------~~w~lklt~~Gl~~~~~~~~~~~~-~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiY  142 (484)
T KOG1023|consen   71 YHGALKSSNCLVD-------SRWVLKLTDFGLNSLLEETAEPEA-HHPIRKALLWTAPELLRGALSQSLESALTQKGDIY  142 (484)
T ss_pred             eeeeeccccceee-------eeEEEEechhhhcccccccccccc-cchhHHHHhccCHHHhcccccccccccccccCCee
Confidence            7999999999999       999999999999876642100000 11112344689999986531  1    36679999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCH----HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          80 SVGCILAEMISNRPIFPGKHY----LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~~----~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      |+|++++|+++...||.....    .+.+..+.. .+.                       ....|.-.......+++..
T Consensus       143 s~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~-----------------------~~~rP~i~~~~e~~~~l~~  198 (484)
T KOG1023|consen  143 SFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-GGS-----------------------NPFRPSIELLNELPPELLL  198 (484)
T ss_pred             hHHHHHHHHHhccCccccccccCChHHHHHHHHh-cCC-----------------------CCcCcchhhhhhcchHHHH
Confidence            999999999999999965332    122222222 010                       0011111101134457999


Q ss_pred             HHHHhcccCCCCCCCHHHHh
Q psy7274         156 LLGKMLTFNPHKRIGVEDAL  175 (308)
Q Consensus       156 ll~~~L~~dP~~R~t~~eil  175 (308)
                      ++..|+..+|..||+++++-
T Consensus       199 l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  199 LVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             HHHHhcccChhhCccHHHHH
Confidence            99999999999999998764

>KOG1164|consensus

Probab=98.95  E-value=3.8e-09  Score=93.05  Aligned_cols=93  Identities=17%  Similarity=0.100  Sum_probs=67.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCcc--ccCCCCC----CC-CCccCcccccccchhhHhhCCCCCCchhh
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLAR--VADPEHD----HT-GFLTEYVATRWYRAPEIMLNSKGYTKSID   77 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~--~~~~~~~----~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~D   77 (308)
                      -.||||||+|+++....  ......+.|.|||+|+  .......    .. .......||..|.++.+..+ ...+.+-|
T Consensus       143 ~iHRDiKp~N~~~g~~~--~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DD  219 (322)
T KOG1164|consen  143 FIHRDIKPENFVVGQSS--RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDD  219 (322)
T ss_pred             cccCCcCHHHeeecCCC--CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchh
Confidence            47999999999998210  0011469999999999  3221111    01 11234569999999998764 56899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCH
Q psy7274          78 IWSVGCILAEMISNRPIFPGKHY  100 (308)
Q Consensus        78 iWSlG~il~ell~g~~pf~~~~~  100 (308)
                      +||++-++.+++.|..||.+...
T Consensus       220 les~~Y~l~el~~g~LPW~~~~~  242 (322)
T KOG1164|consen  220 LESLFYMLLELLKGSLPWEALEM  242 (322)
T ss_pred             hhhHHHHHHHHhcCCCCCccccc
Confidence            99999999999999999977554

>KOG1163|consensus

Probab=98.78  E-value=8.9e-09  Score=83.64  Aligned_cols=94  Identities=18%  Similarity=0.108  Sum_probs=68.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC----CccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG----FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|+|..    ..-....+.++|||+|+.+........    .-....||..|.+--...+ ..-+..-|+=|+
T Consensus       133 iHRDIKPdNFLMG----lgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSv  207 (341)
T KOG1163|consen  133 IHRDIKPDNFLMG----LGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESV  207 (341)
T ss_pred             ccccCCccceeec----cccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhh
Confidence            6999999999976    111234588999999997654322111    1245689999988776654 336778899999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHH
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQL  104 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l  104 (308)
                      |.++..+..|..||+|-......
T Consensus       208 gYvLmYfnrG~LPWQglka~tk~  230 (341)
T KOG1163|consen  208 GYVLMYFNRGSLPWQGLKAATKK  230 (341)
T ss_pred             cceeeeeecCCCcccccchhhHH
Confidence            99999999999999986554433

>KOG1165|consensus

Probab=98.77  E-value=3.7e-08  Score=83.59  Aligned_cols=100  Identities=15%  Similarity=0.136  Sum_probs=74.5

Q ss_pred             CCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC----CccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           7 HKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG----FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         7 HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      -|||||+|+||...  .......|.|+|||+|+.+..+.....    .-.+..||..||+--..++ +.-+..-|+=|+|
T Consensus       147 YRDIKPdNFLIGrp--~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLG  223 (449)
T KOG1165|consen  147 YRDIKPDNFLIGRP--GTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG-REQSRRDDLEALG  223 (449)
T ss_pred             ecccCccceeecCC--CCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecccc-chhhhhhhHHHhh
Confidence            49999999999831  111335589999999998755432211    1245689999999887775 4578889999999


Q ss_pred             HHHHHHhhCCCCCCCC---CHHHHHHHHHH
Q psy7274          83 CILAEMISNRPIFPGK---HYLDQLNHILG  109 (308)
Q Consensus        83 ~il~ell~g~~pf~~~---~~~~~l~~i~~  109 (308)
                      -+++.++.|..||.|-   +..+.+.+|-+
T Consensus       224 HvFmYFLRGsLPWQGLKA~tnK~kYeKIGe  253 (449)
T KOG1165|consen  224 HVFMYFLRGSLPWQGLKADTNKEKYEKIGE  253 (449)
T ss_pred             hhhhhhccCCCccccccCcchHHHHHHhcc
Confidence            9999999999999884   45566666643

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.67  E-value=1.8e-08  Score=81.85  Aligned_cols=88  Identities=13%  Similarity=0.088  Sum_probs=59.1

Q ss_pred             CCCCCC-CCCCcccCccccccCCCCCceEeccCCccccCCCCCC------CC---C-ccCcccccccchhhHhhCCCCCC
Q psy7274           5 NPHKRI-GVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH------TG---F-LTEYVATRWYRAPEIMLNSKGYT   73 (308)
Q Consensus         5 ~~HrDl-Kp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~------~~---~-~~~~~gt~~y~aPE~l~~~~~~~   73 (308)
                      -.|||| ||+|||++       .++.++|+|||+|.........      ..   . ..-...++.|++|+--.--...+
T Consensus       112 IvHrDL~kp~NILv~-------~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~  184 (218)
T PRK12274        112 VAHNDLAKEANWLVQ-------EDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTS  184 (218)
T ss_pred             CccCCCCCcceEEEc-------CCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccch
Confidence            369999 79999998       8899999999999865433210      00   0 00112466778887532111233


Q ss_pred             -chhhHHHHHHHHHHHhhCCCCCCCCC
Q psy7274          74 -KSIDIWSVGCILAEMISNRPIFPGKH   99 (308)
Q Consensus        74 -~~~DiWSlG~il~ell~g~~pf~~~~   99 (308)
                       ...++.+.|+-+|.++||..++-+++
T Consensus       185 ~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        185 WIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             hHHHHHHHhcchHHHHHhccCCccccC
Confidence             45678889999999999997765443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.62  E-value=1.2e-08  Score=90.51  Aligned_cols=55  Identities=18%  Similarity=0.205  Sum_probs=42.8

Q ss_pred             CCCCC-CCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-----CCccCcccccccchhhHhh
Q psy7274           6 PHKRI-GVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-----GFLTEYVATRWYRAPEIML   67 (308)
Q Consensus         6 ~HrDl-Kp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~gt~~y~aPE~l~   67 (308)
                      .|||| ||+|||++       .++.+||+|||+|+.........     ...++.+++..|.|||++.
T Consensus       133 iHrDL~KP~NILv~-------~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        133 THNDLAKPQNWLMG-------PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             eeCCCCCcceEEEc-------CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            69999 99999998       78899999999999765432111     1135667888999999874

>KOG2137|consensus

Probab=98.62  E-value=1.4e-08  Score=93.90  Aligned_cols=143  Identities=17%  Similarity=0.190  Sum_probs=100.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-----C-CCccCcccccccchhhHhhCCCCCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-----T-GFLTEYVATRWYRAPEIMLNSKGYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-----~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiW   79 (308)
                      +|+.|-|++|.++       .++..||+.|+++.....+...     . ....-..-...|.|||++.+ ...+.++|++
T Consensus       122 VH~ni~p~~i~~n-------a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~~~~~sd~f  193 (700)
T KOG2137|consen  122 VHGNIQPEAIVVN-------ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TTNTPASDVF  193 (700)
T ss_pred             eecccchhheeec-------cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-ccccccccce
Confidence            5999999999998       9999999999988765442111     0 00111123457999999875 5688999999


Q ss_pred             HHHHHHHHHh-hCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHH
Q psy7274          80 SVGCILAEMI-SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLG  158 (308)
Q Consensus        80 SlG~il~ell-~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  158 (308)
                      |+||.+|.+. .|+..+.+.+.......-....+...                           .....+++.++++=|.
T Consensus       194 SlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~---------------------------~~~s~~~p~el~~~l~  246 (700)
T KOG2137|consen  194 SLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGA---------------------------FGYSNNLPSELRESLK  246 (700)
T ss_pred             eeeeEEEEEecCCcchhhccCCcchhhhhhccccccc---------------------------ccccccCcHHHHHHHH
Confidence            9999999998 67777766543222221111111000                           0001356789999999


Q ss_pred             HhcccCCCCCCCHHHHhcCCccccc
Q psy7274         159 KMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       159 ~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ++|..++.-||++.+++..+||.+.
T Consensus       247 k~l~~~~~~rp~~~~l~~~~ff~D~  271 (700)
T KOG2137|consen  247 KLLNGDSAVRPTLDLLLSIPFFSDP  271 (700)
T ss_pred             HHhcCCcccCcchhhhhcccccCCc
Confidence            9999999999999999999999763

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.60  E-value=7.4e-09  Score=99.91  Aligned_cols=69  Identities=17%  Similarity=0.155  Sum_probs=53.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+||||+       .++.+||+|||+++.......   .....++|+.|.+||.......-...+++|++|+-
T Consensus       126 iHrDLKP~NILl~-------~~g~vkL~DFGls~~~~~~~~---~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         126 IHRDLKPDNMLIS-------NEGHIKLTDFGLSKVTLNREL---NMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             EeCCccHHHEEEc-------CCCCEEEEeCCCCccccCCcc---cccccccCccccCccccccCCCCceeeeeeecCcC
Confidence            6999999999998       889999999999997643321   13456899999999976544444556778888853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0195|consensus

Probab=98.59  E-value=1.4e-07  Score=78.02  Aligned_cols=120  Identities=14%  Similarity=0.176  Sum_probs=81.4

Q ss_pred             CCCCCcccCccccccCCCCCceEe--ccCCccccCCCCCCCCCccCcccccccchhhHhhCCCC--CCchhhHHHHHHHH
Q psy7274          10 IGVEGALAHPYLEQYYDPADEPIC--DFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG--YTKSIDIWSVGCIL   85 (308)
Q Consensus        10 lKp~Nili~~~~~~~~~~~~~ki~--DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~DiWSlG~il   85 (308)
                      |....++||       .+.+.+|+  |--++.+.          .+..-.+.|++||.+.....  .-.++|+||+++++
T Consensus       317 lns~hvmid-------edltarismad~kfsfqe----------~gr~y~pawmspealqrkped~n~raadmwsfaill  379 (448)
T KOG0195|consen  317 LNSKHVMID-------EDLTARISMADTKFSFQE----------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILL  379 (448)
T ss_pred             cccceEEec-------chhhhheecccceeeeec----------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHH
Confidence            455566776       66666653  43333221          12245778999999864322  22589999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ||+.|+..||..-+..+.-.+|.- -|.                       +     ..+.|+++..+..|+.-|+..||
T Consensus       380 wel~trevpfadlspmecgmkial-egl-----------------------r-----v~ippgis~hm~klm~icmnedp  430 (448)
T KOG0195|consen  380 WELNTREVPFADLSPMECGMKIAL-EGL-----------------------R-----VHIPPGISRHMNKLMNICMNEDP  430 (448)
T ss_pred             HHhhccccccccCCchhhhhhhhh-ccc-----------------------c-----ccCCCCccHHHHHHHHHHhcCCC
Confidence            999999999987766554443321 000                       0     12346788999999999999999


Q ss_pred             CCCCCHHHHh
Q psy7274         166 HKRIGVEDAL  175 (308)
Q Consensus       166 ~~R~t~~eil  175 (308)
                      .+||....++
T Consensus       431 gkrpkfdmiv  440 (448)
T KOG0195|consen  431 GKRPKFDMIV  440 (448)
T ss_pred             CcCCCcceeh
Confidence            9999977654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.52  E-value=1.3e-08  Score=84.15  Aligned_cols=58  Identities=17%  Similarity=0.129  Sum_probs=42.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhh-HhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPE-IMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE-~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .|||+||+||+++       .+| ++|+|||.++......                |-+ +++ ...|+.++|+||+|++
T Consensus       157 ~H~Dikp~Nili~-------~~g-i~liDfg~~~~~~e~~----------------a~d~~vl-er~y~~~~di~~lg~~  211 (232)
T PRK10359        157 VSGDPHKGNFIVS-------KNG-LRIIDLSGKRCTAQRK----------------AKDRIDL-ERHYGIKNEIKDLGYY  211 (232)
T ss_pred             ccCCCChHHEEEe-------CCC-EEEEECCCcccccchh----------------hHHHHHH-HhHhcccccccceeEe
Confidence            6999999999998       677 9999999887553211                111 233 3457789999999998


Q ss_pred             HHHH
Q psy7274          85 LAEM   88 (308)
Q Consensus        85 l~el   88 (308)
                      +.-+
T Consensus       212 ~~~~  215 (232)
T PRK10359        212 LLIY  215 (232)
T ss_pred             ehHH
Confidence            7643

>KOG1166|consensus

Probab=98.37  E-value=3.3e-07  Score=89.37  Aligned_cols=85  Identities=16%  Similarity=0.131  Sum_probs=67.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|+||||+|.||..-......+-.++|+|||.|..+.--.+. ..++..++|-.+-++|+.. ++.+++.+|.+.++.++
T Consensus       816 IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~-~~F~~~~~td~f~C~EM~~-grpWtYq~DyfGlAa~~  893 (974)
T KOG1166|consen  816 IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDG-TKFKAVWHTDLFDCIEMRE-GRPWTYQIDYFGLAATV  893 (974)
T ss_pred             ecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCC-cEEeeeeccccchhHHHhc-CCCCchhhhhHHHHHHH
Confidence            699999999999755444445667999999999865432222 2256778999999999875 57799999999999999


Q ss_pred             HHHhhCC
Q psy7274          86 AEMISNR   92 (308)
Q Consensus        86 ~ell~g~   92 (308)
                      +-|+.|+
T Consensus       894 h~mLFG~  900 (974)
T KOG1166|consen  894 HVMLFGK  900 (974)
T ss_pred             HHHHHHH
Confidence            9999986

>KOG0601|consensus

Probab=98.31  E-value=5.9e-07  Score=81.94  Aligned_cols=137  Identities=16%  Similarity=0.121  Sum_probs=96.8

Q ss_pred             CCCCCCCCCCcccCccccccCCC-CCceEeccCCccccCCCCCCCC--CccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDP-ADEPICDFGLARVADPEHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~-~~~ki~DFGla~~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      -.|-|+||.||++.       ++ +..+++|||+...+....-...  .....-|..-|++||++.  .-++.+.|++++
T Consensus       243 ~~~~~~kp~~i~~~-------~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~--~l~~~~~di~sl  313 (524)
T KOG0601|consen  243 IVHDDLKPANIFTT-------SDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN--GLATFASDIFSL  313 (524)
T ss_pred             ccccccchhheecc-------cccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc--cccchHhhhcch
Confidence            46899999999998       77 8899999999988765431111  011224667899999874  338999999999


Q ss_pred             HHHHHHHhhCCCCCCCC--CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          82 GCILAEMISNRPIFPGK--HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        82 G~il~ell~g~~pf~~~--~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |.++.+..++..+....  +...++..+.     -+                           .+++...+.+....+..
T Consensus       314 ~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----ip---------------------------~e~~~~~s~~l~~~~~~  361 (524)
T KOG0601|consen  314 GEVILEAILGSHLPSVGKNSSWSQLRQGY-----IP---------------------------LEFCEGGSSSLRSVTSQ  361 (524)
T ss_pred             hhhhHhhHhhcccccCCCCCCcccccccc-----Cc---------------------------hhhhcCcchhhhhHHHH
Confidence            99999998887655433  1111111110     00                           11222345566669999


Q ss_pred             hcccCCCCCCCHHHHhcCCcccc
Q psy7274         160 MLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      |+..+|..|++++.++.|++...
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccc
Confidence            99999999999999999999975

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.64  E-value=0.00025  Score=62.92  Aligned_cols=82  Identities=12%  Similarity=0.133  Sum_probs=59.6

Q ss_pred             CCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh----CCCCCCchhhHHHHH
Q psy7274           7 HKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDIWSVG   82 (308)
Q Consensus         7 HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiWSlG   82 (308)
                      -+|+.++|+|++       .++.+.|.|=..-.....+    ......+|...|.+||.-.    .+-.-+...|.+.+|
T Consensus       140 vGDVn~~~~lVs-------d~~~V~LVdsDsfqi~~ng----~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLa  208 (637)
T COG4248         140 VGDVNQNSFLVS-------DDSKVVLVDSDSFQINANG----TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLA  208 (637)
T ss_pred             ccccCccceeee-------cCceEEEEcccceeeccCC----ceEecccCccccCCHHHhccccccccCCCccccchhHH
Confidence            489999999998       8888888874432222221    1234568999999999742    122346778999999


Q ss_pred             HHHHHHhhC-CCCCCCCC
Q psy7274          83 CILAEMISN-RPIFPGKH   99 (308)
Q Consensus        83 ~il~ell~g-~~pf~~~~   99 (308)
                      +++++++.| +.||.|..
T Consensus       209 vLiF~lL~ggrHPysGI~  226 (637)
T COG4248         209 VLIFHLLFGGRHPYSGIP  226 (637)
T ss_pred             HHHHHHHhcCCCCCCccc
Confidence            999999886 89998753

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.53  E-value=4.2e-05  Score=64.39  Aligned_cols=29  Identities=14%  Similarity=0.149  Sum_probs=26.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .||||||+|||++       .++.++|+|||.++..
T Consensus       164 ~HrDlkp~NILv~-------~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        164 YHADLNAHNILLD-------PDGKFWLIDFDRGELR  192 (239)
T ss_pred             CCCCCCchhEEEc-------CCCCEEEEECCCcccC
Confidence            6999999999998       7789999999998753

>KOG0601|consensus

Probab=97.38  E-value=6.3e-05  Score=68.94  Aligned_cols=132  Identities=18%  Similarity=0.110  Sum_probs=86.9

Q ss_pred             CCCCCCCCCCcccCccccccCCC-CCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDP-ADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~-~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      ..|+|+||+||++.       .+ +..+++|||.+..+.-..     .....+++.|-..|++.....+..++|++|+|.
T Consensus       387 ~~~~d~~psni~i~-------~~~~~~~~~~~~~~t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~  454 (524)
T KOG0601|consen  387 FVHLDVKPSNILIS-------NDGFFSKLGDFGCWTRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGL  454 (524)
T ss_pred             hhcccccccceeec-------cchhhhhccccccccccceec-----ccccccccccccchhhccccccccccccccccc
Confidence            47999999999997       43 788999999986432110     111123444423555555566889999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      .+.+.++|.++-.....   +..|...                      ..         ...+....++..+...++..
T Consensus       455 ~~~e~~~~~~ls~~~~~---~~~i~~~----------------------~~---------p~~~~~~~~~q~~~kv~~~~  500 (524)
T KOG0601|consen  455 SVDEAITGSPLSESGVQ---SLTIRSG----------------------DT---------PNLPGLKLQLQVLLKVMINP  500 (524)
T ss_pred             cccccccCcccCccccc---ceeeecc----------------------cc---------cCCCchHHhhhhhhhhhcCC
Confidence            99999988755332211   1111000                      00         00122336778889999999


Q ss_pred             CCCCCCCHHHHhcCCcccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~  182 (308)
                      ++..|+.+.++..|.-|..
T Consensus       501 ~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  501 DRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             ccccchhhhhhcccchhhh
Confidence            9999999999998887744

>PRK10345 hypothetical protein; Provisional

Probab=97.15  E-value=0.00012  Score=60.15  Aligned_cols=31  Identities=10%  Similarity=-0.024  Sum_probs=22.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLAR   39 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~   39 (308)
                      .||||||+|||++.   ....++.++|+|||.+.
T Consensus       127 vhrDlKp~NILl~~---~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        127 VTMELKPQNILCQR---ISESEVIPVVCDNIGES  157 (210)
T ss_pred             eecCCCHHHEEEec---cCCCCCcEEEEECCCCc
Confidence            59999999999971   11134589999955443

>smart00090 RIO RIO-like kinase

Probab=97.14  E-value=0.00015  Score=60.89  Aligned_cols=29  Identities=21%  Similarity=0.173  Sum_probs=25.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccC
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD   42 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~   42 (308)
                      .||||||+||+++        ++.++|+|||.|....
T Consensus       171 iH~Dikp~NIli~--------~~~i~LiDFg~a~~~~  199 (237)
T smart00090      171 VHGDLSEYNILVH--------DGKVVIIDVSQSVELD  199 (237)
T ss_pred             EeCCCChhhEEEE--------CCCEEEEEChhhhccC
Confidence            7999999999995        4789999999987543

>KOG0659|consensus

Probab=97.11  E-value=0.00091  Score=55.71  Aligned_cols=37  Identities=38%  Similarity=0.572  Sum_probs=32.6

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      +.-+.+++||.+||.+|+++.+||+|+||.+..-|..
T Consensus       256 d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~  292 (318)
T KOG0659|consen  256 DALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTP  292 (318)
T ss_pred             HHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCC
Confidence            5567789999999999999999999999999766654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.77  E-value=0.00071  Score=62.13  Aligned_cols=31  Identities=13%  Similarity=0.085  Sum_probs=27.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD   42 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~   42 (308)
                      -.|+|+||.||+++       .++.++++|||++..++
T Consensus       278 ~~H~D~hPgNilv~-------~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFVL-------KDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEEC-------CCCcEEEEeCCCeeECC
Confidence            36999999999998       88999999999998764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.75  E-value=0.00051  Score=64.90  Aligned_cols=28  Identities=18%  Similarity=0.315  Sum_probs=24.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .||||||+|||++        ++.++|+|||+|+..
T Consensus       450 iHrDlkp~NILl~--------~~~~~liDFGla~~~  477 (535)
T PRK09605        450 VHGDLTTSNFIVR--------DDRLYLIDFGLGKYS  477 (535)
T ss_pred             ccCCCChHHEEEE--------CCcEEEEeCcccccC
Confidence            6999999999994        578999999999864

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=96.70  E-value=0.0014  Score=53.34  Aligned_cols=28  Identities=18%  Similarity=0.342  Sum_probs=24.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .|||+||.||+++        ++.++++|||+++..
T Consensus       112 ~H~Dl~~~Nil~~--------~~~~~liDfg~a~~~  139 (199)
T TIGR03724       112 VHGDLTTSNIIVR--------DDKLYLIDFGLGKYS  139 (199)
T ss_pred             ecCCCCcceEEEE--------CCcEEEEECCCCcCC
Confidence            6999999999995        578999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=96.69  E-value=0.00045  Score=56.75  Aligned_cols=28  Identities=21%  Similarity=0.318  Sum_probs=24.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .|||+||.|||++        ++.++|+|||.++..
T Consensus       117 ~H~Dl~p~Nil~~--------~~~~~liDf~~a~~~  144 (211)
T PRK14879        117 IHGDLTTSNMILS--------GGKIYLIDFGLAEFS  144 (211)
T ss_pred             ccCCCCcccEEEE--------CCCEEEEECCcccCC
Confidence            6999999999995        477999999998753

>KOG0665|consensus

Probab=96.53  E-value=0.00097  Score=56.93  Aligned_cols=75  Identities=35%  Similarity=0.612  Sum_probs=61.0

Q ss_pred             CCcccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC--CCCCCCCCccccccCCCCHHHHHHHHHHHHhhhcc
Q psy7274         228 DEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD--EPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQ  303 (308)
Q Consensus       228 ~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  303 (308)
                      .+....++.+.+||..||.+|+++++||.|||++-+.++..  +|..+ +++-.++..+.+.++||++|++|++.|.+
T Consensus       281 ~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~~~ev~ap~pe-~~d~~~d~~~~t~~e~ke~If~ev~~f~~  357 (369)
T KOG0665|consen  281 LDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYDPDEVEAPPPE-IYDKQLDEREHTIEEWKELIFKEVQRFEE  357 (369)
T ss_pred             cchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeecccccccCCCCc-hhhhhcccccCCHHHHHHHHHHHHHhhcc
Confidence            44457888899999999999999999999999997766543  23322 46555666778899999999999999986

>KOG1266|consensus

Probab=96.47  E-value=0.0021  Score=55.36  Aligned_cols=137  Identities=15%  Similarity=0.075  Sum_probs=79.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -+|+.+-..-|++.       .+|-+||+--.-......-... ........+-++|.|||.=. -...+.++|||++|.
T Consensus       199 iihgnlTc~tifiq-------~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~-~tn~~~a~dIy~fgm  270 (458)
T KOG1266|consen  199 IIHGNLTCDTIFIQ-------HNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGT-TTNTTGASDIYKFGM  270 (458)
T ss_pred             cccCCcchhheeec-------CCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCc-ccccccchhhhhhhH
Confidence            36888888888887       8888887532211111000000 00001123456788888522 234677999999999


Q ss_pred             HHHHHhhCCCC-CCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISNRPI-FPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g~~p-f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ...+|..+..- -.+.+....-..|.+..                                  +.-...--++++.+||+
T Consensus       271 cAlemailEiq~tnseS~~~~ee~ia~~i----------------------------------~~len~lqr~~i~kcl~  316 (458)
T KOG1266|consen  271 CALEMAILEIQSTNSESKVEVEENIANVI----------------------------------IGLENGLQRGSITKCLE  316 (458)
T ss_pred             HHHHHHHheeccCCCcceeehhhhhhhhe----------------------------------eeccCccccCcCccccc
Confidence            88898877521 22221111101111000                                  00012334578999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      -.|..||++.+++.||..-..
T Consensus       317 ~eP~~rp~ar~llfHpllfeV  337 (458)
T KOG1266|consen  317 GEPNGRPDARLLLFHPLLFEV  337 (458)
T ss_pred             CCCCCCcchhhhhcCceeeec
Confidence            999999999999999987553

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.43  E-value=0.0014  Score=51.67  Aligned_cols=27  Identities=15%  Similarity=0.057  Sum_probs=23.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      .|+|+||.||+++        ++.++++|||.|..
T Consensus       110 ~HgD~~~~Nil~~--------~~~~~liDf~~a~~  136 (170)
T cd05151         110 CHNDLLPGNFLLD--------DGRLWLIDWEYAGM  136 (170)
T ss_pred             ecCCCCcCcEEEE--------CCeEEEEecccccC
Confidence            8999999999996        35799999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0033|consensus

Probab=96.24  E-value=0.002  Score=53.16  Aligned_cols=31  Identities=35%  Similarity=0.573  Sum_probs=29.0

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+++.+||..||++|+|+.+||+|||+.+
T Consensus       242 ~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  242 EAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            6678889999999999999999999999986

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.18  E-value=0.0018  Score=60.57  Aligned_cols=31  Identities=13%  Similarity=0.110  Sum_probs=27.0

Q ss_pred             CCCCCCCCCcccCccccccCCCC----CceEeccCCccccCC
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA----DEPICDFGLARVADP   43 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~----~~ki~DFGla~~~~~   43 (308)
                      .|+|+||.||+++       .++    .++++|||++..++.
T Consensus       282 fHaDpHPGNIlv~-------~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        282 FHADMHPGNIFVS-------YDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             eeCCCChHHeEEe-------cCCCCCCeEEEEecceEEECCH
Confidence            6999999999998       565    999999999987653

>KOG0671|consensus

Probab=96.12  E-value=0.0025  Score=55.64  Aligned_cols=35  Identities=31%  Similarity=0.582  Sum_probs=31.1

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+-+++.+||.|||++|+|..+||.||||..+.
T Consensus       379 ~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  379 HVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             HhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            34677888999999999999999999999998753

>KOG1093|consensus

Probab=95.95  E-value=0.012  Score=54.10  Aligned_cols=92  Identities=22%  Similarity=0.165  Sum_probs=67.1

Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChh
Q psy7274          73 TKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN  152 (308)
Q Consensus        73 ~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  152 (308)
                      ++++||||+|.++.++..|..++......+++..+....-.+.. ... ....+...                 -.++..
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~-~~~-~a~e~~~~-----------------~~~d~~  169 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQE-LLS-TAMEHLIQ-----------------LLADKK  169 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchh-HHH-HHHHHHHH-----------------HhhhHh
Confidence            36899999999999999999999888888887777655433322 111 11111111                 124577


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       153 ~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ...++.+|+-..|..|+...++++++-|...
T Consensus       170 ~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  170 RLPLLKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             HHHHhccCCccccccccchhHHhcCccHHHH
Confidence            8899999999999999999999999988764

>KOG0670|consensus

Probab=95.70  E-value=0.0051  Score=56.07  Aligned_cols=31  Identities=42%  Similarity=0.782  Sum_probs=28.7

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      .+.+++.+||.+||++|+++.+||+||||..
T Consensus       721 ~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  721 QLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            6788889999999999999999999999864

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=95.69  E-value=0.016  Score=51.37  Aligned_cols=48  Identities=40%  Similarity=0.673  Sum_probs=42.0

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCCCCCCCccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFS  279 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  279 (308)
                      ...+.+.+||..||.+|+++++++.||||..+..|.++|....+|..+
T Consensus       275 ~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~~~~~~~~~~  322 (342)
T cd07854         275 EALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVSLHPFHIE  322 (342)
T ss_pred             HHHHHHHHHhCCCchhccCHHHHhCCCccccccCCccccCCCCCcccc
Confidence            466788999999999999999999999999998888888877777644

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0663|consensus

Probab=95.69  E-value=0.0068  Score=52.30  Aligned_cols=35  Identities=31%  Similarity=0.468  Sum_probs=29.9

Q ss_pred             HHHhhhhhcccCCCCcCChhhhhcCcccccccCCC
Q psy7274         233 WRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA  267 (308)
Q Consensus       233 ~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~  267 (308)
                      --+.+.++|.+||.+|+|+++||+|.||.+...|.
T Consensus       337 g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~  371 (419)
T KOG0663|consen  337 GFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPI  371 (419)
T ss_pred             HHHHHHHHhccCccccccHHHhhcccccccCCCCC
Confidence            34556999999999999999999999999966443

>KOG0599|consensus

Probab=95.29  E-value=0.0061  Score=51.19  Aligned_cols=33  Identities=33%  Similarity=0.565  Sum_probs=29.6

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...++++++|+.||++|+++++||+||||.++-
T Consensus       258 ~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~  290 (411)
T KOG0599|consen  258 TVKDLISRLLQVDPTKRITAKEALAHPFFIQIA  290 (411)
T ss_pred             cHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence            556778999999999999999999999998764

>KOG1826|consensus

Probab=95.29  E-value=0.0045  Score=63.54  Aligned_cols=80  Identities=19%  Similarity=0.174  Sum_probs=64.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      ..|+++|+-|.+|.       .+..+|++++|+.+...+.   .......++++.|+++++. +...++.++|+|+.||.
T Consensus      1361 ~v~~~Lkf~lpmIV-------tny~v~~gk~gLdKIknp~---~sf~Gl~l~sp~~v~qli~-N~ik~t~rsdilr~s~~ 1429 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIV-------TNYNVKLGKGGLDKIKNPV---LSFFGLELCSPIYVLQLIK-NEIKFTKRSDILRRSLS 1429 (2724)
T ss_pred             chhhhhhhhcccee-------cCCcccccccccccccCch---HhhhhhhhCCHHHHHHHHH-HHHhhhhHHHHHHHHHH
Confidence            57999999999998       8899999999999944332   2224556888899999975 44568888999999999


Q ss_pred             HHHHhhCCCCC
Q psy7274          85 LAEMISNRPIF   95 (308)
Q Consensus        85 l~ell~g~~pf   95 (308)
                      +|+...|.++|
T Consensus      1430 ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1430 LYLRSDGNAYF 1440 (2724)
T ss_pred             HHHHhcccHHH
Confidence            99988776655

>KOG0662|consensus

Probab=95.26  E-value=0.013  Score=46.24  Aligned_cols=31  Identities=42%  Similarity=0.750  Sum_probs=28.0

Q ss_pred             HHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         234 RENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       234 ~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ++.+.|+|..+|.+|+++++|+.||||.+..
T Consensus       260 rdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  260 RDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             HHHHHHHhccCcccccCHHHHhcCccccccC
Confidence            5677999999999999999999999998753

>PHA03212 serine/threonine kinase US3; Provisional

Probab=95.24  E-value=0.012  Score=53.47  Aligned_cols=38  Identities=26%  Similarity=0.336  Sum_probs=33.0

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      ..+.+.+.+||.+||.+|++++++|.||||.++.+|-.
T Consensus       350 ~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~  387 (391)
T PHA03212        350 IDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYP  387 (391)
T ss_pred             hhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCCC
Confidence            35677889999999999999999999999998766533

>KOG0666|consensus

Probab=94.99  E-value=0.018  Score=49.41  Aligned_cols=38  Identities=37%  Similarity=0.508  Sum_probs=32.2

Q ss_pred             CcccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         229 EPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       229 ~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      +..+.-+++.|||.+||.+|+++++||+|+||.+-..|
T Consensus       309 k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  309 KDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             CCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence            33446777899999999999999999999999985444

>KOG1167|consensus

Probab=94.97  E-value=0.011  Score=52.25  Aligned_cols=33  Identities=36%  Similarity=0.543  Sum_probs=28.7

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ..-+.+.|+|..||.+|+++++||.||||.+.+
T Consensus       356 ~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  356 LLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             HHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence            444566999999999999999999999999654

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=94.89  E-value=0.015  Score=50.54  Aligned_cols=34  Identities=24%  Similarity=0.354  Sum_probs=30.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ....+.+.+||..||.+|+|+.+++.||||.++.
T Consensus       262 ~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         262 NHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             hHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            3567888999999999999999999999998763

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA03209 serine/threonine kinase US3; Provisional

Probab=94.86  E-value=0.015  Score=51.94  Aligned_cols=34  Identities=29%  Similarity=0.326  Sum_probs=29.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +.+..+.+.+||.+||.+|+++.++|.||||.++
T Consensus       324 ~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~  357 (357)
T PHA03209        324 PIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL  357 (357)
T ss_pred             CchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence            4466678899999999999999999999999863

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.81  E-value=0.015  Score=46.31  Aligned_cols=28  Identities=18%  Similarity=0.273  Sum_probs=24.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .|+||-++||++.        .+.+.++|||++...
T Consensus       114 vHGDLTtsNiIl~--------~~~i~~IDfGLg~~s  141 (204)
T COG3642         114 VHGDLTTSNIILS--------GGRIYFIDFGLGEFS  141 (204)
T ss_pred             ecCCCccceEEEe--------CCcEEEEECCccccc
Confidence            6999999999995        455999999998743

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=94.76  E-value=0.019  Score=50.18  Aligned_cols=29  Identities=34%  Similarity=0.493  Sum_probs=26.9

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      .+.+.+.+||.+||.+|+|++++|+||||
T Consensus       289 ~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         289 KAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             HHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            46678899999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0660|consensus

Probab=94.58  E-value=0.024  Score=49.32  Aligned_cols=27  Identities=48%  Similarity=0.585  Sum_probs=23.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAH  257 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~  257 (308)
                      +..-++++|||.|||.+|+|+++||+|
T Consensus       284 p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  284 PLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcC
Confidence            355666699999999999999999987

>KOG0661|consensus

Probab=94.57  E-value=0.02  Score=51.63  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=30.4

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      .....+.+.+|+.|||.+|+++.+||+||||..-+
T Consensus       264 s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  264 SSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             CHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence            34667778999999999999999999999998644

>PTZ00284 protein kinase; Provisional

Probab=94.56  E-value=0.021  Score=53.12  Aligned_cols=34  Identities=24%  Similarity=0.439  Sum_probs=30.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ..+.+++.+||.+||.+|++++++|.||||..+.
T Consensus       412 ~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        412 DLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             HHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence            3566888999999999999999999999998753

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=94.50  E-value=0.023  Score=48.99  Aligned_cols=30  Identities=27%  Similarity=0.504  Sum_probs=27.6

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ....+.+.+||.+||.+|+|+++++.||||
T Consensus       259 ~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         259 TDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            356788899999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG1243|consensus

Probab=94.49  E-value=0.076  Score=50.18  Aligned_cols=74  Identities=16%  Similarity=0.297  Sum_probs=51.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.|++|.-+-++++       ..|+.||++|-++.........   .....--..|..|+.+-.   -+-..|.|-|||+
T Consensus       126 lvHgNv~~~SVfVn-------~~GeWkLggle~v~~~~~~~~~---~~~~~~~~s~~~P~~~~~---s~~s~D~~~Lg~l  192 (690)
T KOG1243|consen  126 LVHGNVCKDSVFVN-------ESGEWKLGGLELVSKASGFNAP---AKSLYLIESFDDPEEIDP---SEWSIDSWGLGCL  192 (690)
T ss_pred             eeeccEeeeeEEEc-------CCCcEEEeeeEEEeccccCCcc---cccchhhhcccChhhcCc---cccchhhhhHHHH
Confidence            46899999999998       9999999999988754332110   011122224667765421   2246899999999


Q ss_pred             HHHHhhC
Q psy7274          85 LAEMISN   91 (308)
Q Consensus        85 l~ell~g   91 (308)
                      ++|++.|
T Consensus       193 i~el~ng  199 (690)
T KOG1243|consen  193 IEELFNG  199 (690)
T ss_pred             HHHHhCc
Confidence            9999998

>KOG0667|consensus

Probab=94.48  E-value=0.026  Score=52.63  Aligned_cols=36  Identities=25%  Similarity=0.344  Sum_probs=31.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ..|.+.+.+||.|||.+|+++.+||.|||+......
T Consensus       476 ~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~~  511 (586)
T KOG0667|consen  476 KLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSLE  511 (586)
T ss_pred             HHHHHHHHHHhccCchhcCCHHHHhcCccccccccc
Confidence            467888899999999999999999999999966543

>PTZ00036 glycogen synthase kinase; Provisional

Probab=94.35  E-value=0.02  Score=52.75  Aligned_cols=67  Identities=21%  Similarity=0.366  Sum_probs=47.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC-----CCCCCCCcccccc-CCCCHHHHHHHHHH
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE-----PVAEEPFRFSMEL-DDLPKETLKRLIFE  296 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~  296 (308)
                      +..+.+++.+||..+|.+|+++.++|.||||..++++...     ...+..|.|..++ .+++.+..++++.+
T Consensus       324 ~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (440)
T PTZ00036        324 PDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCDAEIKEMSDACRRKIIPK  396 (440)
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcccccCCCCCCCCCCCcCCCHHHHhhCCHHHHHHHhhH
Confidence            4467888999999999999999999999999998775432     2233455555433 25566666655544

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=94.15  E-value=0.034  Score=48.48  Aligned_cols=30  Identities=37%  Similarity=0.475  Sum_probs=27.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ..+.+.+.+||..||.+|+|++++|.||||
T Consensus       288 ~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         288 SKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            356678899999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.10  E-value=0.027  Score=45.16  Aligned_cols=31  Identities=13%  Similarity=0.105  Sum_probs=25.9

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccC
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD   42 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~   42 (308)
                      +-+|+|+.|.|++++       .++ ++|+||+.|...+
T Consensus        78 ~p~H~D~~~~N~~~~-------~~~-~~lIDwe~a~~gD  108 (188)
T PRK10271         78 APLHMDVHAGNLVHS-------ASG-LRLIDWEYAGDGD  108 (188)
T ss_pred             eeecCCCCCccEEEE-------CCC-EEEEeCCcccCCC
Confidence            568999999999997       555 9999999987543

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=94.01  E-value=0.032  Score=47.88  Aligned_cols=30  Identities=27%  Similarity=0.335  Sum_probs=27.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ..+.+.+.+||..||.+|+++++++.||||
T Consensus       258 ~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         258 GVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            357888899999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0615|consensus

Probab=93.76  E-value=0.03  Score=49.70  Aligned_cols=33  Identities=24%  Similarity=0.344  Sum_probs=28.5

Q ss_pred             HHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         233 WRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       233 ~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ..+++++||..||..|+++++||.||||.....
T Consensus       413 a~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  413 ALDLINWMLVVDPENRPSADEALNHPWFKDAPC  445 (475)
T ss_pred             HHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence            345569999999999999999999999996543

>KOG1290|consensus

Probab=93.58  E-value=0.03  Score=50.78  Aligned_cols=39  Identities=28%  Similarity=0.549  Sum_probs=34.1

Q ss_pred             CCcccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         228 DEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       228 ~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      .....|.+++.-||.|+|.+|+++.+||.|||+.....|
T Consensus       521 e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  521 EDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP  559 (590)
T ss_pred             HHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence            344577888899999999999999999999999987765

>KOG0594|consensus

Probab=93.50  E-value=0.049  Score=47.22  Aligned_cols=37  Identities=35%  Similarity=0.616  Sum_probs=32.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA  267 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~  267 (308)
                      .+..+.+++||.++|.+|+++..||.||||.++..+.
T Consensus       276 ~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  276 PDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS  312 (323)
T ss_pred             ccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence            4677888999999999999999999999999976554

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=93.34  E-value=0.042  Score=44.28  Aligned_cols=30  Identities=27%  Similarity=0.247  Sum_probs=22.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD   42 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~   42 (308)
                      -.|+||.+.|||++       . +.+.|+|||.|....
T Consensus       128 ivHGDLs~~NIlv~-------~-~~~~iIDf~qav~~~  157 (188)
T PF01163_consen  128 IVHGDLSEYNILVD-------D-GKVYIIDFGQAVDSS  157 (188)
T ss_dssp             EEESS-STTSEEEE-------T-TCEEE--GTTEEETT
T ss_pred             ceecCCChhhEEee-------c-ceEEEEecCcceecC
Confidence            46999999999996       4 489999999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=92.76  E-value=0.066  Score=45.89  Aligned_cols=29  Identities=48%  Similarity=0.677  Sum_probs=27.0

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ...+.+.+||..||.+|+++.+++.||||
T Consensus       260 ~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         260 SGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            46788899999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0576|consensus

Probab=92.71  E-value=0.019  Score=53.91  Aligned_cols=144  Identities=15%  Similarity=0.092  Sum_probs=90.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .|||    ||+.        +++..|.+|||.+..+....    ..++..+|+.++|||+...+ .+....|.|++|.--
T Consensus       358 ~~~d----~~l~--------s~~~~~~~~~~v~~~L~~~~----~~~t~~~~~~~~~pev~~~~-~~~~~p~~~~~~~~~  420 (829)
T KOG0576|consen  358 VHRD----NILG--------SEEEVKLLDFAVPPQLTRTM----KPRTAIGTPEPLAPEVIQEN-TIDGCPDSGSLAVSA  420 (829)
T ss_pred             cCcc----cccc--------cccccccccccCCcccCccc----ccccCCCCCCCCCchhhccc-ccccCCCccCCCcch
Confidence            5666    8877        45889999999988775442    13567899999999988654 488999999999877


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      .++.-|-+|-...-  .....    .|..+.  -..+.              ....|.      ...-.++-..|+.-.|
T Consensus       421 ~~~ap~~pPr~~P~--~~~~~----~g~~p~--s~~L~--------------~~~aw~------~~~~~~~~~~~~~g~P  472 (829)
T KOG0576|consen  421 IQMAPGLPPRSSPP--AVLPM----IGNGPN--SPMLT--------------DKSAWS------PVFHRDFPAPCLNGLP  472 (829)
T ss_pred             hhcCCCCCCCCCCc--cccCC----CCCCCC--ccccc--------------hhhhcC------cccccCCcccccCCCC
Confidence            77777776654311  00000    010000  00000              000000      1111246778888899


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCchhh
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVSWR  194 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~~~  194 (308)
                      ..|++.-.++.|.+|+.-...+.-..+|.
T Consensus       473 ~~pkv~mgacfsKvfngCpl~i~~aaswI  501 (829)
T KOG0576|consen  473 PTPKVHMGACFSKVFNGCPLRIHCAASWI  501 (829)
T ss_pred             CCCcchhhHHHHHHhccCcccceeccccc
Confidence            99999999999999987655544444443

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=92.64  E-value=0.08  Score=46.08  Aligned_cols=36  Identities=28%  Similarity=0.364  Sum_probs=31.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ....+.+.+||..||.+|+++.+++.||||..+...
T Consensus       260 ~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  295 (309)
T cd07872         260 TEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTR  295 (309)
T ss_pred             HHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccc
Confidence            356788899999999999999999999999987643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=92.61  E-value=0.055  Score=46.30  Aligned_cols=36  Identities=14%  Similarity=0.062  Sum_probs=25.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -.|+|+++.|||++......+.+..+.++||+.++.
T Consensus       159 i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        159 INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            369999999999972100112357799999998863

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=92.56  E-value=0.1  Score=45.40  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=31.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ...+.+.+.+||.+||.+|+++++++.||||.....|
T Consensus       263 ~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~  299 (309)
T cd07845         263 SEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP  299 (309)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence            3456778899999999999999999999999876554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=92.50  E-value=0.073  Score=45.71  Aligned_cols=30  Identities=43%  Similarity=0.596  Sum_probs=27.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ....+.+.+||..||.+|+++.++|.||||
T Consensus       261 ~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         261 ELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            355678899999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=92.44  E-value=0.2  Score=47.83  Aligned_cols=29  Identities=38%  Similarity=0.658  Sum_probs=27.3

Q ss_pred             HhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         235 ENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       235 ~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +++.+||.+||.+|+++.++|+||||...
T Consensus       428 dLi~~mL~~dP~kR~ta~e~L~Hpff~~~  456 (566)
T PLN03225        428 ELLKSMMRFKGRQRISAKAALAHPYFDRE  456 (566)
T ss_pred             HHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence            68899999999999999999999999874

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=92.38  E-value=0.062  Score=44.03  Aligned_cols=29  Identities=14%  Similarity=0.094  Sum_probs=24.6

Q ss_pred             CCCCCCCCCcccCccccccCCCC---CceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA---DEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~---~~ki~DFGla~~~   41 (308)
                      .|+|+++.|||++       .++   .+.++||+.++..
T Consensus       140 ~H~Dl~~~NILv~-------~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  140 YHGDLNPSNILVD-------PDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             CCCCCCcccEEEe-------CCCCceeEEEEcchhceeC
Confidence            6999999999998       444   7899999987754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PHA03211 serine/threonine kinase US3; Provisional

Probab=92.12  E-value=0.084  Score=49.00  Aligned_cols=31  Identities=16%  Similarity=0.179  Sum_probs=28.3

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+++.+||.+||.+|+++.++|+||||..
T Consensus       430 ~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        430 DVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            5677889999999999999999999999964

>KOG0664|consensus

Probab=92.11  E-value=0.3  Score=41.30  Aligned_cols=37  Identities=43%  Similarity=0.565  Sum_probs=31.2

Q ss_pred             CCcccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         228 DEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       228 ~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...........++|.++|.+|++.++|+.|+|+.+.+
T Consensus       314 ~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  314 DKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             ccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence            3444556667999999999999999999999999865

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.07  E-value=0.073  Score=44.34  Aligned_cols=27  Identities=11%  Similarity=0.074  Sum_probs=23.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      +|+|+.|.||+++       .++ +.|+||+.+..
T Consensus       156 ~HgD~~~~Nii~~-------~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       156 LHGDFQIGNLITS-------GKG-TYWIDLGDFGY  182 (226)
T ss_pred             EecCCCCCcEEEc-------CCC-cEEEechhcCc
Confidence            7999999999998       666 99999998764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=92.07  E-value=0.092  Score=45.48  Aligned_cols=33  Identities=36%  Similarity=0.501  Sum_probs=30.1

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+.+||..||.+|+++++++.||||..+.
T Consensus       261 ~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         261 DGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            567888999999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=92.01  E-value=0.071  Score=46.86  Aligned_cols=34  Identities=21%  Similarity=0.263  Sum_probs=30.5

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ..+.+.+.+||.+||.+|+++++++.||||.++.
T Consensus       281 ~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         281 PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             HHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence            3677888999999999999999999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.95  E-value=0.082  Score=46.00  Aligned_cols=28  Identities=21%  Similarity=0.240  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCcccCccccccCCC----CCceEeccCCcc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDP----ADEPICDFGLAR   39 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~----~~~ki~DFGla~   39 (308)
                      -+|+|+.+.|||++       .+    +.+.++||..|.
T Consensus       181 lcH~Dl~~~Nil~~-------~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         181 FCHNDLQEGNILLL-------NPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             EEecCCCcCeEEec-------CCCCCCCcEEEEeeCCCC
Confidence            48999999999998       53    789999998875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=91.63  E-value=0.099  Score=45.51  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=30.9

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      .+.+.+.+||.+||.+|++++++|+||||...+..
T Consensus       270 ~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~  304 (314)
T cd08216         270 HFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR  304 (314)
T ss_pred             HHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence            46677899999999999999999999999987643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>TIGR02721 ycfN_thiK thiamine kinase

Probab=91.41  E-value=0.11  Score=44.06  Aligned_cols=30  Identities=10%  Similarity=0.046  Sum_probs=24.9

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .-+|+|+.|.||+++       .++ +.|+||..|...
T Consensus       147 ~l~H~Dl~~~Nil~~-------~~~-~~lIDwE~a~~g  176 (256)
T TIGR02721       147 APLHMDVHAYNLVVT-------PQG-LKLIDWEYASDG  176 (256)
T ss_pred             eeecCCCCcCcEEEe-------CCC-CEEEeccccCcC
Confidence            358999999999998       555 899999988643

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=91.36  E-value=0.11  Score=48.89  Aligned_cols=33  Identities=30%  Similarity=0.347  Sum_probs=29.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      .++.+.+.+||.+||.+|+++.++|.||||...
T Consensus       428 ~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        428 ADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             hHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            456677899999999999999999999999764

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.27  E-value=0.087  Score=43.26  Aligned_cols=30  Identities=17%  Similarity=0.206  Sum_probs=20.5

Q ss_pred             cCCCCCCCCCCccc-CccccccCCCCCceEeccCCccc
Q psy7274           4 FNPHKRIGVEGALA-HPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         4 ~~~HrDlKp~Nili-~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      +-+|.|+.+.|||+ +       .++.++++||-.|..
T Consensus       144 v~cHnDl~~~Nil~~~-------~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINN-------KDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETS-------SSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEecc-------CCCeEEEecHHHHhh
Confidence            45899999999999 5       789999999988753

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=90.90  E-value=0.16  Score=43.42  Aligned_cols=29  Identities=41%  Similarity=0.791  Sum_probs=26.7

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ...+.+.+||..||.+|++..+++.||||
T Consensus       256 ~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         256 DGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            45678899999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=90.80  E-value=0.14  Score=43.81  Aligned_cols=32  Identities=16%  Similarity=0.188  Sum_probs=28.0

Q ss_pred             ccCCCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           3 MFNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         3 ~~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      ++-+|.|+.|+|+|.+       +.+.++|+||-.|..-
T Consensus       153 ~v~cH~Dl~~~N~l~t-------~~~~l~LIDWEyAg~~  184 (269)
T COG0510         153 LVPCHNDLNPGNLLLT-------DKGGLFLIDWEYAGLN  184 (269)
T ss_pred             eeeecCCCCccceEEc-------CCCcEEEEecccCCCc
Confidence            4679999999999998       6799999999988753

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=90.76  E-value=0.13  Score=42.82  Aligned_cols=30  Identities=10%  Similarity=0.084  Sum_probs=25.2

Q ss_pred             cCCCCCCCCCCcccCccccccCC-CCCceEeccCCccc
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYD-PADEPICDFGLARV   40 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~-~~~~ki~DFGla~~   40 (308)
                      .-+|+|+.+.|||++       . ++.+.|+||-.|..
T Consensus       171 ~l~H~Dl~~~Nil~~-------~~~~~~~lIDwe~a~~  201 (235)
T cd05157         171 VFCHNDLLSGNIIYN-------EEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEEcCCCCcCcEEEe-------CCCCCEEEEEcccCCc
Confidence            358999999999998       5 47799999987753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG0588|consensus

Probab=90.63  E-value=0.19  Score=47.53  Aligned_cols=42  Identities=26%  Similarity=0.422  Sum_probs=36.1

Q ss_pred             CCcccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC
Q psy7274         228 DEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE  269 (308)
Q Consensus       228 ~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~  269 (308)
                      .-.....+++.+||..||.+|++.+++++|||+..+..+...
T Consensus       234 ~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  234 NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence            344578899999999999999999999999999998765543

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=90.62  E-value=0.25  Score=42.41  Aligned_cols=31  Identities=39%  Similarity=0.647  Sum_probs=28.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      +....+.+.+||..||.+|++..+++.||||
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            4577888999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=90.34  E-value=0.16  Score=43.35  Aligned_cols=30  Identities=40%  Similarity=0.668  Sum_probs=27.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ....+.+.+||..||.+|++.++++.||||
T Consensus       255 ~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         255 STGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             HHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            356788899999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG3087|consensus

Probab=90.30  E-value=0.2  Score=40.07  Aligned_cols=32  Identities=22%  Similarity=0.293  Sum_probs=23.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .|+||-.+||++.+    .+....+-++|||++...
T Consensus       135 iHGDLTTSNill~~----~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  135 IHGDLTTSNILLRS----DGNQITPILIDFGLSSVS  166 (229)
T ss_pred             ecccccccceEEec----CCCcCceEEEeecchhcc
Confidence            69999999999872    112233479999998754

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=90.29  E-value=0.18  Score=42.53  Aligned_cols=34  Identities=21%  Similarity=0.461  Sum_probs=30.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ..+.+.+.+|+..+|.+|++..+++.||||..+.
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~  264 (265)
T cd06605         231 PDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE  264 (265)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence            4578889999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=90.28  E-value=0.18  Score=45.25  Aligned_cols=75  Identities=29%  Similarity=0.329  Sum_probs=59.0

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC--------------------CCCCCCCCCCCccccccCCCCHHH
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD--------------------PADEPVAEEPFRFSMELDDLPKET  289 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~  289 (308)
                      .....+.+.+||.+||.+|+++.+++.||||...+.                    ...+|....+|+++++....+..+
T Consensus       261 ~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (372)
T cd07853         261 THEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYTSDFEPSANPPFDDEYEKNLTSVRQ  340 (372)
T ss_pred             CHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcchhccccccccccccccccCCcccCCCCCCCCCcccccccCCHHH
Confidence            345678889999999999999999999999987431                    223455556777777766678999


Q ss_pred             HHHHHHHHHhhhccC
Q psy7274         290 LKRLIFEETRVFKQE  304 (308)
Q Consensus       290 ~~~~~~~e~~~~~~~  304 (308)
                      +++.+++++......
T Consensus       341 ~~~~~~~~~~~~~~~  355 (372)
T cd07853         341 VKEELHQFILEQQQG  355 (372)
T ss_pred             HHHHHHHHHHHhhcc
Confidence            999999999877543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=90.20  E-value=0.17  Score=42.44  Aligned_cols=30  Identities=33%  Similarity=0.502  Sum_probs=28.1

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ..+.+.+.+||..||.+|++..++++||||
T Consensus       231 ~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  231 EELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            577888899999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=90.11  E-value=0.27  Score=42.32  Aligned_cols=38  Identities=32%  Similarity=0.489  Sum_probs=33.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      ....+.+.+||..+|.+|++..+++.|+||.+...|..
T Consensus       256 ~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~  293 (298)
T cd07841         256 DDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP  293 (298)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence            35667889999999999999999999999999877653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	308
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-105
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-13
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-102
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-14
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-100
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-23
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-13
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-22
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-12
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-96
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-23
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-12
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-95
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-24
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-12
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-95
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	9e-24
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-12
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	8e-89
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-23
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-87
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	4e-22
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-10
3rp9_A	458	Mitogen-activated protein kinase; structural genom	6e-86
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-23
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-12
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-85
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-23
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-11
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-85
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-23
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-81
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-15
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-09
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-81
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	9e-14
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	8e-10
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-78
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-12
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	9e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	9e-74
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-73
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-12
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-63
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-04
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-58
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-53
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-52
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-52
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-52
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-50
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	7e-50
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	7e-50
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-49
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-49
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-49
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-47
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-44
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-31
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-30
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-30
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-30
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	8e-30
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-29
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-23
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-21
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-20
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-20
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	9e-20
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	9e-20
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-20
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-19
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-19
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-19
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-19
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-19
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-19
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-19
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-18
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-18
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-18
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-18
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-18
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	9e-18
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-17
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-17
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-17
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-17
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-17
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-17
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-17
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-17
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-17
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-17
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-17
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-16
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-16
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-16
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-16
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-16
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-16
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-15
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-15
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-15
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-15
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-15
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-14
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-14
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-14
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-14
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-14
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-14
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-14
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-13
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-13
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-13
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-12
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-12
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-11
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-11
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-11
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-11
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-11
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-10
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-10
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-10
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-10
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-10
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	8e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-10
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-09
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-09
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-09
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-09
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-09
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-09
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-09
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-09
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-08
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-08
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-08
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-07
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-07
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-07
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-06
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	8e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	7e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-04

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  311 bits (798), Expect = e-105
 Identities = 163/273 (59%), Positives = 173/273 (63%), Gaps = 80/273 (29%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM+SN
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           RPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PNAD 
Sbjct: 229 RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS 288

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGV 211
            ALDLL KMLTFNPHKRI VE ALAHPYLE                              
Sbjct: 289 KALDLLDKMLTFNPHKRIEVEQALAHPYLE------------------------------ 318

Query: 212 EGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPV 271
                                                             QYYDP+DEP+
Sbjct: 319 --------------------------------------------------QYYDPSDEPI 328

Query: 272 AEEPFRFSMELDDLPKETLKRLIFEETRVFKQE 304
           AE PF+F MELDDLPKE LK LIFEET  F+  
Sbjct: 329 AEAPFKFDMELDDLPKEKLKELIFEETARFQPG 361

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 67.7 bits (166), Expect = 5e-13
 Identities = 28/34 (82%), Positives = 30/34 (88%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML FNPHKRI VE ALAHPYLEQYYDP+DEPI +
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAE 330

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  300 bits (770), Expect = e-102
 Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 1/160 (0%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR+ DP + H G L+E + T+WYR+P ++L+   YTK+ID+W+ GCI AEM++ 
Sbjct: 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           + +F G H L+Q+  IL  +     ED   +++     Y+++   +P  P   L P    
Sbjct: 222 KTLFAGAHELEQMQLILESIPVVHEEDRQELLS-VIPVYIRNDMTEPHKPLTQLLPGISR 280

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
            A+D L ++LTF+P  R+  E+AL+HPY+  Y  P DEP+
Sbjct: 281 EAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 70.0 bits (172), Expect = 7e-14
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPV 271
           ++L F+P  R+  E AL+HPY+  Y  P DEP+
Sbjct: 288 QILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 66.9 bits (164), Expect = 7e-13
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPI 32
           +L F+P  R+  E AL+HPY+  Y  P DEPI
Sbjct: 289 ILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  297 bits (763), Expect = e-100
 Identities = 83/168 (49%), Positives = 112/168 (66%), Gaps = 8/168 (4%)

Query: 32  ICDFGLARVADPE-------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           +CDFGLAR+ D               + E+VATRWYRAPE+ML S  Y++++D+WS GCI
Sbjct: 153 VCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCI 212

Query: 85  LAEMISNRPIFPGKHYLDQLNHILGILGSPTPE-DLSCIINEKARSYLQSLPFKPKVPWE 143
           LAE+   RPIFPG+ Y  QL  I GI+G+P  + DL CI + +AR Y++SLP  P  P E
Sbjct: 213 LAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
            ++P  +P  +DLL +ML F+P KRI  ++AL HPYL+ Y+DP DEP 
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 96.9 bits (242), Expect = 3e-23
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 4/63 (6%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAE----EPFRFSMELDDLPKETLKRLI 294
           +ML+F+P KRI  + AL HPYL+ Y+DP DEP  E      F F    + L  + LK+LI
Sbjct: 288 RMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLI 347

Query: 295 FEE 297
           + E
Sbjct: 348 WNE 350

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 19/34 (55%), Positives = 25/34 (73%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+F+P KRI  + AL HPYL+ Y+DP DEP  +
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGE 322

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  287 bits (736), Expect = 4e-96
 Identities = 74/167 (44%), Positives = 99/167 (59%), Gaps = 5/167 (2%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           ICDF LAR    +       T YV  RWYRAPE+++  KG+TK +D+WS GC++AEM + 
Sbjct: 175 ICDFNLAREDTAD----ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR 230

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYL-QSLPFKPKVPWEILYPNAD 150
           + +F G  + +QLN I+ ++G+P  ED+    +  AR YL  SL   P   W  + P AD
Sbjct: 231 KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTAD 290

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENW 197
           P ALDL+ KML FNP +RI  E AL HPY E  +DP D      E +
Sbjct: 291 PVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERF 337

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 93.1 bits (232), Expect = 7e-22
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML FNP +RI  E AL HPY E  +DP D        RF  +        + ++   E 
Sbjct: 299 KMLEFNPQRRISTEQALRHPYFESLFDPLDLTEG-LSERFHFDESVTDVYDMHKIFTAEV 357

Query: 299 RVFK 302
             F 
Sbjct: 358 ERFN 361

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 17/34 (50%), Positives = 19/34 (55%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML FNP +RI  E AL HPY E  +DP D     
Sbjct: 300 MLEFNPQRRISTEQALRHPYFESLFDPLDLTEGL 333

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  286 bits (735), Expect = 6e-96
 Identities = 79/204 (38%), Positives = 119/204 (58%), Gaps = 23/204 (11%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR AD E      +T YV TRWYRAPE++LN   YT+++DIWSVGCI+AEMI+ 
Sbjct: 169 ILDFGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           + +F G  +LDQL  I+ + G+P  E +  + +++A++Y++ LP   K  +  +  NA P
Sbjct: 223 KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASP 282

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS----------------WRE 195
            A++LL KML  +  +R+   +ALAHPY E  +D  DEP                  W+ 
Sbjct: 283 LAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKR 342

Query: 196 N-WGKMLMFNPHKRIGVEGALAHP 218
             + ++L F P +++G   +   P
Sbjct: 343 VTYKEVLSFKPPRQLGARVSKETP 366

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 98.2 bits (245), Expect = 1e-23
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+ +  +R+    ALAHPY E  +D  DEP   + +  S +  D   +  KR+ ++E 
Sbjct: 290 KMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQV-QKYDDSFDDVDRTLDEWKRVTYKEV 348

Query: 299 RVFKQE 304
             FK  
Sbjct: 349 LSFKPP 354

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+ +  +R+    ALAHPY E  +D  DEP   
Sbjct: 291 MLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQ 324

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  284 bits (730), Expect = 3e-95
 Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 6/160 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR AD E      +T YV TRWYRAPE++L+   Y +++DIWSVGCI+AEM++ 
Sbjct: 167 ILDFGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           + +F GK YLDQL  IL + G P  E +  + ++ A+SY+QSLP  P+  +  L+P A P
Sbjct: 221 KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP 280

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
            A DLL KML  +  KR+    AL HP+ E + DP +E  
Sbjct: 281 QAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETE 320

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  100 bits (252), Expect = 1e-24
 Identities = 23/64 (35%), Positives = 36/64 (56%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML  +  KR+    AL HP+ E + DP +E  A++PF  S+E + L  +  K+ I++E 
Sbjct: 288 KMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEI 347

Query: 299 RVFK 302
             F 
Sbjct: 348 VNFS 351

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML  +  KR+    AL HP+ E + DP +E    
Sbjct: 289 MLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 322

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  284 bits (730), Expect = 4e-95
 Identities = 82/161 (50%), Positives = 108/161 (67%), Gaps = 6/161 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR           +T YVATRWYRAPEIMLN   Y +++DIWSVGCI+AE+++ 
Sbjct: 173 ILDFGLARHTAD------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           R +FPG  ++DQL  IL ++G+P  E L  I +E AR+Y+QSL   PK+ +  ++  A+P
Sbjct: 227 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP 286

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            A+DLL KML  +  KRI    ALAH Y  QY+DP DEPV+
Sbjct: 287 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 327

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 98.6 bits (246), Expect = 9e-24
 Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+ +  KRI    ALAH Y  QY+DP DEPVA +P+  S+E  DL  +  K L ++E 
Sbjct: 294 KMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSLESRDLLIDEWKSLTYDEV 352

Query: 299 RVFKQEDPN 307
             F     +
Sbjct: 353 ISFVPPPLD 361

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+ +  KRI    ALAH Y  QY+DP DEP+ D
Sbjct: 295 MLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 328

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  270 bits (693), Expect = 8e-89
 Identities = 74/208 (35%), Positives = 101/208 (48%), Gaps = 47/208 (22%)

Query: 32  ICDFGLARVADPEHDHT-------------------GFLTEYVATRWYRAPEIMLNSKGY 72
           +CDFGLAR  + E D                       LT +V TRWYRAPE++L  + Y
Sbjct: 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY 229

Query: 73  TKSIDIWSVGCILAEMISN-----------RPIFPG-----------------KHYLDQL 104
           TKSIDIWS GCI AE+++             P+FPG                 K   DQL
Sbjct: 230 TKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQL 289

Query: 105 NHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN 164
           N I  I+G+PT +DL  I   +   Y++  P +  +  +  YP+   + ++LL  ML FN
Sbjct: 290 NIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFN 349

Query: 165 PHKRIGVEDALAHPYLEQYYDPADEPVS 192
           P+KRI ++ AL HPYL+       E  S
Sbjct: 350 PNKRITIDQALDHPYLKDVRKKKLENFS 377

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 97.1 bits (242), Expect = 5e-23
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSME-LDDLPKETLKRLIFEE 297
            ML FNP+KRI ++ AL HPYL+       E  + +      +    L +  L+ +  +E
Sbjct: 344 SMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFDDWMVLSETQLRYIFLKE 403

Query: 298 TRVFKQE 304
            + F  E
Sbjct: 404 VQSFHPE 410

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 66.7 bits (163), Expect = 1e-12
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML FNP+KRI ++ AL HPYL+       E    
Sbjct: 345 MLKFNPNKRITIDQALDHPYLKDVRKKKLENFST 378

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  265 bits (680), Expect = 2e-87
 Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 34/194 (17%)

Query: 32  ICDFGLARV------------------ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT 73
           + DFGL+R                    +   D    LT+YVATRWYRAPEI+L S  YT
Sbjct: 150 VADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYT 209

Query: 74  KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQS 133
           K ID+WS+GCIL E++  +PIFPG   ++QL  I+G++  P+ ED+  I +  A++ ++S
Sbjct: 210 KGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIES 269

Query: 134 LPFKPKVPWEILY----------------PNADPNALDLLGKMLTFNPHKRIGVEDALAH 177
           L  K ++                       + +  ALDLL K+L FNP+KRI   DAL H
Sbjct: 270 LKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH 329

Query: 178 PYLEQYYDPADEPV 191
           P++  +++P +EP 
Sbjct: 330 PFVSIFHNPNEEPN 343

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 94.4 bits (235), Expect = 4e-22
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELD-DLPKETLKRLIFEE 297
           K+L FNP+KRI    AL HP++  +++P +EP  +      +  +     +  + L++ E
Sbjct: 311 KLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKHSIDDYRNLVYSE 370

Query: 298 TRVFKQE 304
               K+E
Sbjct: 371 ISRRKRE 377

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 16/35 (45%), Positives = 24/35 (68%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICDF 35
           +L FNP+KRI    AL HP++  +++P +EP CD 
Sbjct: 312 LLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDH 346

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  264 bits (676), Expect = 6e-86
 Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 55/216 (25%)

Query: 32  ICDFGLARVADPEHD------------------------HTGFLTEYVATRWYRAPEIML 67
           +CDFGLAR  D   +                            LT +V TRWYRAPE++L
Sbjct: 197 VCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256

Query: 68  NSKGYTKSIDIWSVGCILAEMISN-----------RPIFPGKHYL--------------- 101
             + YT++ID+WS+GCI AE+++             P+FPG                   
Sbjct: 257 LQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFH 316

Query: 102 -----DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL 156
                DQLN I  ILG+P+ ED+  +  E A+ Y++  P +        +P +  +A+ L
Sbjct: 317 TRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHL 376

Query: 157 LGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
           L +ML FNP+KRI + + LAHP+ ++      E  +
Sbjct: 377 LKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNA 412

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 96.8 bits (241), Expect = 9e-23
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSME-LDDLPKETLKRLIFEE 297
           +ML+FNP+KRI +   LAHP+ ++      E  A E  R       ++ +  L+    +E
Sbjct: 379 RMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKE 438

Query: 298 TRVFKQE 304
            + +  E
Sbjct: 439 IQRYHPE 445

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+FNP+KRI +   LAHP+ ++      E    
Sbjct: 380 MLVFNPNKRITINECLAHPFFKEVRIAEVETNAT 413

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  264 bits (675), Expect = 1e-85
 Identities = 77/236 (32%), Positives = 116/236 (49%), Gaps = 37/236 (15%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR A         +T YV TR+YRAPE++L    Y +++DIWSVGCI+ EM+ +
Sbjct: 205 ILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRH 259

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-- 149
           + +FPG+ Y+DQ N ++  LG+P PE +   +    R+Y+++ P    + +  L+P++  
Sbjct: 260 KILFPGRDYIDQWNKVIEQLGTPCPEFMKK-LQPTVRNYVENRPKYAGLTFPKLFPDSLF 318

Query: 150 ----------DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS------- 192
                        A DLL KML  +P KRI V+DAL HPY+  +YDPA+           
Sbjct: 319 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDK 378

Query: 193 -----------WREN-WGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWREN 236
                      W+E  + +++      + GV      P           P S   N
Sbjct: 379 QLDEREHTIEEWKELIYKEVMNSEEKTKNGVVKGQPSPSGAAVNSSESLPPSSSVN 434

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 97.6 bits (243), Expect = 5e-23
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADE-PVAEEPFRFSMELDDLPKETLKRLIFEE 297
           KML+ +P KRI V+ AL HPY+  +YDPA+      + +   ++  +   E  K LI++E
Sbjct: 338 KMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 397

Query: 298 TRVFKQEDPN 307
               +++  N
Sbjct: 398 VMNSEEKTKN 407

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 62.6 bits (152), Expect = 4e-11
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPIC 33
           ML+ +P KRI V+ AL HPY+  +YDPA+    
Sbjct: 339 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 371

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  260 bits (666), Expect = 2e-85
 Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 37/208 (17%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR A         +T YV TR+YRAPE++L    Y +++DIWSVGCI+ EMI  
Sbjct: 168 ILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKG 222

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-- 149
             +FPG  ++DQ N ++  LG+P PE +   +    R+Y+++ P      +E L+P+   
Sbjct: 223 GVLFPGTDHIDQWNKVIEQLGTPCPEFMKK-LQPTVRTYVENRPKYAGYSFEKLFPDVLF 281

Query: 150 ----------DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS------- 192
                        A DLL KML  +  KRI V++AL HPY+  +YDP++           
Sbjct: 282 PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDK 341

Query: 193 -----------WREN-WGKMLMFNPHKR 208
                      W+E  + +++    H  
Sbjct: 342 QLDEREHTIEEWKELIYKEVMDLEHHHH 369

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 96.7 bits (241), Expect = 4e-23
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEE-PFRFSMELDDLPKETLKRLIFEE 297
           KML+ +  KRI V+ AL HPY+  +YDP++            ++  +   E  K LI++E
Sbjct: 301 KMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 360

Query: 298 TRVFKQE 304
               +  
Sbjct: 361 VMDLEHH 367

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 65.5 bits (160), Expect = 3e-12
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+ +  KRI V+ AL HPY+  +YDP++     
Sbjct: 302 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 335

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  249 bits (637), Expect = 3e-81
 Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 11/167 (6%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG A+   P          Y+ +R+YRAPE++  ++ YT ++DIWSVGCI AEM+  
Sbjct: 173 LCDFGSAKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY----P 147
            PIF G +   QL+ I+ +LG P+ E L  +           L     +PW  ++     
Sbjct: 229 EPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVD---LYNSKGIPWSNVFSDHSL 285

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWR 194
                A DLL  +L + P +R+   +AL HPY ++ +DPA +  + +
Sbjct: 286 KDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLPNNK 332

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 73.9 bits (182), Expect = 4e-15
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADE-----PVAEEPFRFSMELDDLPKETLKRL 293
            +L + P +R+    AL HPY ++ +DPA +      + E+ FRF     ++  E  K  
Sbjct: 297 ALLQYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAK 356

Query: 294 IFEE 297
           +  +
Sbjct: 357 LVRK 360

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           +L + P +R+    AL HPY ++ +DPA +   +
Sbjct: 298 LLQYLPEERMKPYEALCHPYFDELHDPATKLPNN 331

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  249 bits (638), Expect = 3e-81
 Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 8/162 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG A+   P          Y+ +R+YRAPE+ML +  YT SID+WS+GC+  E+I  
Sbjct: 183 LCDFGSAKKLIPSE----PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P+F G+  +DQL  I+ I+G+PT E +  +            P      W  + P   P
Sbjct: 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVR---FPTLKAKDWRKILPEGTP 295

Query: 152 -NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             A+DLL ++L + P  RI   +A+AHP+ +   +  +  V 
Sbjct: 296 SLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVK 337

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 70.1 bits (172), Expect = 9e-14
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 14/75 (18%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEP-------------FRFS-MELDD 284
           ++L + P  RI    A+AHP+ +   +  +  V                 F FS  EL  
Sbjct: 304 QILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSI 363

Query: 285 LPKETLKRLIFEETR 299
           +P   L R++ +   
Sbjct: 364 IPGNVLNRILPKNFS 378

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 58.2 bits (141), Expect = 8e-10
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           +L + P  RI    A+AHP+ +   +  +  + +
Sbjct: 305 ILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKN 338

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  244 bits (624), Expect = 1e-78
 Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 8/165 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG A+              Y+ +R+YRAPE++  +  YT SID+WS GC+LAE++  
Sbjct: 198 LCDFGSAKQLVR----GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW-EILYPNAD 150
           +PIFPG   +DQL  I+ +LG+PT E +   +N     +    P     PW ++  P   
Sbjct: 254 QPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNYTEF--KFPQIKAHPWTKVFRPRTP 310

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRE 195
           P A+ L  ++L + P  R+   +A AH + ++  DP  +  + R+
Sbjct: 311 PEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 355

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 65.5 bits (160), Expect = 3e-12
 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEP----FRFSMELDDLPKETLKRLI 294
           ++L + P  R+    A AH + ++  DP  +          F F+ +           LI
Sbjct: 319 RLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILI 378

Query: 295 FEETR 299
               R
Sbjct: 379 PPHAR 383

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 52.0 bits (125), Expect = 9e-08
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
           +L + P  R+    A AH + ++  DP  + 
Sbjct: 320 LLEYTPTARLTPLEACAHSFFDELRDPNVKL 350

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  229 bits (585), Expect = 9e-74
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 11/162 (6%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + D+GLA    P  +        VA+R+++ PE++++ + Y  S+D+WS+GC+LA MI  
Sbjct: 172 LIDWGLAEFYHPGQE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227

Query: 92  R-PIFPGKHYLDQLNHILGILGSPTPED-LSCIINEKARSYLQSLPFKPKVPWEILYPN- 148
           + P F G    DQL  I  +LG+    D +     E    +   L    +  WE    + 
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 287

Query: 149 ----ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
                 P ALD L K+L ++   R+   +A+ HPY       
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 329

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 7/28 (25%), Positives = 12/28 (42%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDP 266
           K+L ++   R+    A+ HPY       
Sbjct: 302 KLLRYDHQSRLTAREAMEHPYFYTVVKD 329

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 6/27 (22%), Positives = 11/27 (40%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDP 27
           +L ++   R+    A+ HPY       
Sbjct: 303 LLRYDHQSRLTAREAMEHPYFYTVVKD 329

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  228 bits (584), Expect = 7e-73
 Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 8/165 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG A++             Y+ +R+YRAPE++  +  YT +IDIWS GC++AE++  
Sbjct: 183 LIDFGSAKILIA----GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE-ILYPNAD 150
           +P+FPG+  +DQL  I+ +LG+P+ E +  +            P     P+  +  P   
Sbjct: 239 QPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME---HKFPQIRPHPFSKVFRPRTP 295

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRE 195
           P+A+DL+ ++L + P  R+   +AL HP+ ++         + RE
Sbjct: 296 PDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRE 340

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEP----FRFSMELDDLPKETLKRLI 294
           ++L + P  R+    AL HP+ ++                 F ++ E   +  + + RL+
Sbjct: 304 RLLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLV 363

Query: 295 FEETR 299
            +   
Sbjct: 364 PQHAE 368

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 7/31 (22%), Positives = 13/31 (41%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
           +L + P  R+    AL HP+ ++        
Sbjct: 305 LLEYTPSARLTAIEALCHPFFDELRTGEARM 335

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  201 bits (513), Expect = 3e-63
 Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 5/160 (3%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           +CDFG AR+   P    + +  + VATRWYR+PE+++    Y   +D+W++GC+ AE++S
Sbjct: 143 LCDFGFARLLTGP----SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
             P++PGK  +DQL  I   LG   P         +  S ++    +   P E+ +PN  
Sbjct: 199 GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNIS 258

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
             AL LL   L  +P +R+  E  L HPY E   +  D  
Sbjct: 259 YPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLA 298

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEP 270
             L  +P +R+  E  L HPY E   +  D  
Sbjct: 267 GCLHMDPTERLTCEQLLHHPYFENIREIEDLA 298

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
            L  +P +R+  E  L HPY E   +  D  
Sbjct: 268 CLHMDPTERLTCEQLLHHPYFENIREIEDLA 298

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  189 bits (483), Expect = 2e-58
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 5/152 (3%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           +CDFG AR  A P         + VATRWYRAPE+++    Y K++D+W++GC++ EM  
Sbjct: 165 LCDFGFARTLAAPGE----VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM 220

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
             P+FPG   +DQL HI+  LG+  P            + ++    K + P E  YP   
Sbjct: 221 GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS 280

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
              +DL  K L  +P KR    + L H + + 
Sbjct: 281 EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  175 bits (445), Expect = 3e-53
 Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 7/149 (4%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFGLAR    P        T  + T WYRAP++++ SK Y+ +IDIWSVGCI AEM++
Sbjct: 141 IADFGLARAFGIPVRK----YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
             P+FPG    DQL  I  ILG+P  ++   +   +   Y  +      +PWE      D
Sbjct: 197 GTPLFPGVSEADQLMRIFRILGTPNSKNWPNV--TELPKYDPNFTVYEPLPWESFLKGLD 254

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPY 179
            + +DLL KML  +P++RI  + AL H Y
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  173 bits (441), Expect = 4e-52
 Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLA+    P        T  V TRWYRAPE++  ++ Y   +D+W+VGCILAE++ 
Sbjct: 153 LADFGLAKSFGSPNRA----YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL 208

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYL---QSLPFKPKVPWEILYP 147
             P  PG   LDQL  I   LG+PT E             L    +    P +P   ++ 
Sbjct: 209 RVPFLPGDSDLDQLTRIFETLGTPTEEQW------PDMCSLPDYVTFKSFPGIPLHHIFS 262

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
            A  + LDL+  +  FNP  RI    AL   Y      P  
Sbjct: 263 AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP 303

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  172 bits (438), Expect = 5e-52
 Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P        T  V T WYRAP++++ SK Y+ S+DIWS+GCI AEMI+
Sbjct: 160 LADFGLARAFGIPVRS----YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPE---DLSCIINEKARSYLQSLPFKPKVPWEILYP 147
            +P+FPG    DQL  I  ILG+P P     +  +   K R++        K PW  + P
Sbjct: 216 GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF----QVFEKKPWSSIIP 271

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
                 +DLL  ML F+P+KRI   DA+ HPY
Sbjct: 272 GFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  168 bits (427), Expect = 3e-50
 Identities = 58/152 (38%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR  + P           V T WYR P+I+L S  Y+  ID+W VGCI  EM +
Sbjct: 141 LADFGLARAKSIPTKT----YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT 196

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPE---DLSCIINEKARSYLQSLPFKPKVPWEILYP 147
            RP+FPG    +QL+ I  ILG+PT E    +      K  +Y    P           P
Sbjct: 197 GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY----PKYRAEALLSHAP 252

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
             D +  DLL K+L F    RI  EDA+ HP+
Sbjct: 253 RLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  166 bits (424), Expect = 7e-50
 Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 12/165 (7%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR    P +      +  V T WYRAP++++ S+ Y+ SIDIWS GCILAEMI+
Sbjct: 149 LGDFGLARAFGIPVNT----FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT 204

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE-----IL 145
            +P+FPG +  +QL  I  I+G+P       +   K   Y  ++  +P            
Sbjct: 205 GKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV--TKLPKYNPNIQQRPPRDLRQVLQPHT 262

Query: 146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
               D N +D L  +L  NP  R+  + AL HP+  +YY  A   
Sbjct: 263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASMG 307

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEP 270
            +L  NP  R+  + AL HP+  +YY  A   
Sbjct: 276 GLLQLNPDMRLSAKQALHHPWFAEYYHHASMG 307

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  166 bits (423), Expect = 7e-50
 Identities = 57/151 (37%), Positives = 76/151 (50%), Gaps = 15/151 (9%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+   +      LT  V T WYRAPE++L S  Y   +D+WSVGCI AEM   
Sbjct: 161 LADFGLARIYSYQMA----LTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRR 215

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPE---DLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           +P+F G    DQL  I  ++G P  +       +            P +   P + + P 
Sbjct: 216 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA-------FPPRGPRPVQSVVPE 268

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
            + +   LL +MLTFNPHKRI    AL H Y
Sbjct: 269 MEESGAQLLLEMLTFNPHKRISAFRALQHSY 299

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  166 bits (424), Expect = 1e-49
 Identities = 62/159 (38%), Positives = 82/159 (51%), Gaps = 9/159 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+   +      LT  V T WYRAPE++L S  Y   +D+WSVGCI AEM   
Sbjct: 161 LADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRR 215

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P+F G   +DQL  IL ++G P  ED    +    +++      K   P E    + D 
Sbjct: 216 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF----HSKSAQPIEKFVTDIDE 271

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
              DLL K LTFNP KRI    AL+HPY +      +  
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENL 310

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 39.5 bits (93), Expect = 8e-04
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEP-FRFSMELD 283
           K L FNP KRI    AL+HPY +      +   +  P  + + EL+
Sbjct: 279 KCLTFNPAKRISAYSALSHPYFQDLERCKENLDSHLPPSQNTSELN 324

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  165 bits (421), Expect = 1e-49
 Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + +FGLAR    P        +  V T WYR P+++  +K Y+ SID+WS GCI AE+ +
Sbjct: 142 LANFGLARAFGIPVRC----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197

Query: 91  -NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
             RP+FPG    DQL  I  +LG+PT E    +   K   Y     +        + P  
Sbjct: 198 AGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM--TKLPDYKPYPMYPATTSLVNVVPKL 255

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
           +    DLL  +L  NP +RI  E+AL HPY
Sbjct: 256 NATGRDLLQNLLKCNPVQRISAEEALQHPY 285

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  166 bits (422), Expect = 2e-49
 Identities = 62/150 (41%), Positives = 79/150 (52%), Gaps = 8/150 (5%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFGLAR    P        T  + T WYR PEI+L S+ Y+ S+DIWS+ CI AEM+ 
Sbjct: 178 IGDFGLARAFGIPIRQ----FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM 233

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP-FKPKVPWEILYPNA 149
             P+FPG   +DQL  I  +LG P       +       + QS P F+ K    +L    
Sbjct: 234 KTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV--TALPDWKQSFPKFRGKTLKRVLGALL 291

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
           D   LDLL  ML  +P KRI  ++AL HPY
Sbjct: 292 DDEGLDLLTAMLEMDPVKRISAKNALEHPY 321

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  162 bits (411), Expect = 1e-47
 Identities = 59/179 (32%), Positives = 79/179 (44%), Gaps = 13/179 (7%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR  +  ++      T  V T WYR PE++L  + Y   ID+W  GCI+AEM +
Sbjct: 165 LADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIIN-EKARSYLQSLPFKPKVPWEILYPN- 148
             PI  G     QL  I  + GS TPE    + N E        L    K   +      
Sbjct: 225 RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL--ELVKGQKRKVKDRLKAY 282

Query: 149 -ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD-------EPVSWRENWGK 199
             DP ALDL+ K+L  +P +RI  +DAL H +      P+D          S  E    
Sbjct: 283 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAP 341

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  155 bits (394), Expect = 1e-44
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 18/165 (10%)

Query: 32  ICDFGLARV-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           I D G AR+   P           V T WYRAPE++L ++ YTK+IDIW++GCI AE+++
Sbjct: 173 IADMGFARLFNSPLKPLADLDPV-VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231

Query: 91  NRPIFPGK---------HYLDQLNHILGILGSPTPED------LSCIINEKARSYLQSLP 135
           + PIF  +         ++ DQL+ I  ++G P  +D      +             +  
Sbjct: 232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT 291

Query: 136 FKPKVPW-EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
               + + E      D  A  LL K+LT +P KRI  E A+  PY
Sbjct: 292 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 336

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  119 bits (300), Expect = 5e-31
 Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 36/190 (18%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG +               Y+ +R+YRAPE++L    Y   ID+WS+GCILAE+++ 
Sbjct: 243 VIDFGSSCYEHQRV------YTYIQSRFYRAPEVILG-ARYGMPIDMWSLGCILAELLTG 295

Query: 92  RPIFPGKHYLDQLNHILGILGSP--------------------------TPEDLSCIINE 125
            P+ PG+   DQL  ++ +LG P                          T      ++  
Sbjct: 296 YPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLN 355

Query: 126 KARSYLQSLPFKP--KVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL-EQ 182
             RS    L   P  +     L    DP  LD L + L ++P  R+    AL HP+L  +
Sbjct: 356 GGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415

Query: 183 YYDPADEPVS 192
              P     +
Sbjct: 416 LPKPPTGEKT 425

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  117 bits (294), Expect = 2e-30
 Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 40/187 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG +              +Y+ +R+YR+PE++L    Y  +ID+WS+GCIL EM + 
Sbjct: 202 IVDFGSSCQLGQRI------YQYIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTG 254

Query: 92  RPIFPGKHYLDQLNHILGILGSP--------------------------TPEDLSCIINE 125
            P+F G + +DQ+N I+ +LG P                            +D       
Sbjct: 255 EPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKP 314

Query: 126 KARSYLQSL------PFKPKVPWEILYPNADPNAL-DLLGKMLTFNPHKRIGVEDALAHP 178
                L ++          +   E  +  AD     DL+ +ML ++P  RI    AL H 
Sbjct: 315 PGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHS 374

Query: 179 YLEQYYD 185
           + ++  D
Sbjct: 375 FFKKTAD 381

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  116 bits (293), Expect = 2e-30
 Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 26/180 (14%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG    A  +H+H    T  VATR YR PE++L   G+ +  D+WS+GCIL E    
Sbjct: 183 VADFG---SATFDHEH---HTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRG 235

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPE--------------DLSCIINEKARSYLQ--SLP 135
             +F      + L  +  ILG                    L    N     Y++    P
Sbjct: 236 FTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP 295

Query: 136 FKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRE 195
            K  +  + L         DL+ +ML F+P +RI + +AL HP+            + R 
Sbjct: 296 LKSYMLQDSLE---HVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRN 352

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  116 bits (293), Expect = 2e-30
 Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 22/165 (13%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG    A  + D+       + TR YRAPE++LN  G+  S D+WS GC+LAE+ + 
Sbjct: 203 LIDFG---CATFKSDY---HGSIINTRQYRAPEVILNL-GWDVSSDMWSFGCVLAELYTG 255

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP---------- 141
             +F    +++ L  +  I+       L          Y+     K   P          
Sbjct: 256 SLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315

Query: 142 -WEILYPNA----DPNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
             +   P           D L  +L  +P  R    + L H +LE
Sbjct: 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  115 bits (289), Expect = 8e-30
 Identities = 45/191 (23%), Positives = 67/191 (35%), Gaps = 34/191 (17%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D G A   D  +      T  + TR YR+PE++L +  +    DIWS  C++ E+I+ 
Sbjct: 179 IADLGNACWYDEHY------TNSIQTREYRSPEVLLGA-PWGCGADIWSTACLIFELITG 231

Query: 92  RPIFPGKHY------LDQLNHILGILGSPTPEDLS----------------CIINEKARS 129
             +F            D +  I+ +LG      L                  I   K   
Sbjct: 232 DFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP 291

Query: 130 YLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADE 189
               L  K K        +      D L  ML  +P KR      + HP+L+      + 
Sbjct: 292 LEDVLTEKYKFS-----KDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 346

Query: 190 PVSWRENWGKM 200
            V  RE +G  
Sbjct: 347 RVPDRELYGSG 357

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  114 bits (287), Expect = 1e-29
 Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 28/172 (16%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG    A  + +H    +  V+TR YRAPE++L   G+++  D+WS+GCIL E    
Sbjct: 178 VVDFG---SATYDDEH---HSTLVSTRHYRAPEVILAL-GWSQPCDVWSIGCILIEYYLG 230

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPE--------------DLSCIINEKARSYLQSLPFK 137
             +FP     + L  +  ILG                    L    +  A  Y+     +
Sbjct: 231 FTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYV----SR 286

Query: 138 PKVPW-EILYPNA--DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
              P  E +           DL+ KML ++P KRI + +AL HP+ +     
Sbjct: 287 ACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 99.1 bits (247), Expect = 1e-23
 Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 29/151 (19%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMI 89
           I DFGL +            +    T  + APE++     +  T ++DI+S GC+   +I
Sbjct: 164 ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           S      G H              P  + L    N    +           P      + 
Sbjct: 224 SE-----GSH--------------PFGKSLQRQANILLGAC----SLDCLHPE----KHE 256

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
           D  A +L+ KM+  +P KR   +  L HP+ 
Sbjct: 257 DVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 91.6 bits (228), Expect = 2e-21
 Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----------KGYTKSIDIWSV 81
           + DFG+A    P+          V T  Y  PE + +              +   D+WS+
Sbjct: 167 LIDFGIANQMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225

Query: 82  GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP 141
           GCIL  M   +  F     ++Q+              L  II+            + + P
Sbjct: 226 GCILYYMTYGKTPFQ--QIINQI------------SKLHAIIDPN---------HEIEFP 262

Query: 142 WEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
                   + +  D+L   L  +P +RI + + LAHPY++    P ++ 
Sbjct: 263 -----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 306

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 90.1 bits (223), Expect = 1e-20
 Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 29/162 (17%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM-LNSKGYTKSIDIWSVGCILAEMIS 90
           + D                         Y   E +  ++  +T +++ W +G  +  +  
Sbjct: 235 LGDVSALWKVGT------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               F       + +     L  P  + L+                   +P         
Sbjct: 289 LFLPFGLVTPGIKGSWKRPSLRVPGTDSLA-------------FGSCTPLP--------- 326

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
                L+G+ L F+  +R+   +A+  P   Q  +     +S
Sbjct: 327 DFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLS 368

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 88.2 bits (219), Expect = 3e-20
 Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 39/169 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----------KGYTKSIDIWSV 81
           + DFG+A    P+          V T  Y  PE + +              +   D+WS+
Sbjct: 148 LIDFGIANQMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206

Query: 82  GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP 141
           GCIL  M   +   P +  ++Q+              L  II+            + + P
Sbjct: 207 GCILYYMTYGKT--PFQQIINQI------------SKLHAIIDPN---------HEIEFP 243

Query: 142 WEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
                   + +  D+L   L  +P +RI + + LAHPY++    P ++ 
Sbjct: 244 -----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 287

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 88.2 bits (219), Expect = 9e-20
 Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 33/161 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+ V + +      + E + T +Y APE++   K Y +  D+WS+G IL  +++ 
Sbjct: 180 IVDFGLSAVFENQK----KMKERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAG 233

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F G+   + L  +                            F     W     N   
Sbjct: 234 YPPFGGQTDQEILRKVEK----------------------GKYTFDSP-EW----KNVSE 266

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            A DL+ +ML F+  +RI  + AL HP++++     +  + 
Sbjct: 267 GAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIE 307

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 87.0 bits (216), Expect = 9e-20
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 27/170 (15%)

Query: 24  YYDPADEP---ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           + D  D     I DFG AR+  P+      L     T  Y APE+ LN  GY +S D+WS
Sbjct: 139 FTDENDNLEIKIIDFGFARLKPPD---NQPLKTPCFTLHYAAPEL-LNQNGYDESCDLWS 194

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           +G IL  M+S +  F            + I+          I             F+ + 
Sbjct: 195 LGVILYTMLSGQVPFQSHDRSLTCTSAVEIM--------KKIKKGD-------FSFEGE- 238

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            W     N    A DL+  +LT +P+KR+ +     + +L+     +  P
Sbjct: 239 AW----KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP 284

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 87.0 bits (216), Expect = 9e-20
 Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 32/173 (18%)

Query: 24  YYDPADEP----ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 79
           Y D +  P    ICDFG A+    E+   G L     T  + APE+ L  +GY  + DIW
Sbjct: 149 YVDESGNPESIRICDFGFAKQLRAEN---GLLMTPCYTANFVAPEV-LERQGYDAACDIW 204

Query: 80  SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPK 139
           S+G +L  M++    F                   TPE++   I     S          
Sbjct: 205 SLGVLLYTMLTGYTPFANG-------------PDDTPEEILARIGSGKFSL-------SG 244

Query: 140 VPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
             W     +    A DL+ KML  +PH+R+     L HP++  +       ++
Sbjct: 245 GYW----NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN 293

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 86.3 bits (214), Expect = 1e-19
 Identities = 23/154 (14%), Positives = 46/154 (29%), Gaps = 13/154 (8%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM-------LNSKGYTKSIDIWSVGCI 84
           + DFG AR  + +            T  Y  P++         + K Y  ++D+WS+G  
Sbjct: 157 LTDFGAARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212

Query: 85  LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI 144
                +    F       +   ++  + +  P      + +     +      P      
Sbjct: 213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMP--VSCS 270

Query: 145 LYPNADPNALDLLGKMLTFNPHKRIGVEDALAHP 178
           L          +L  +L  +  K  G +   A  
Sbjct: 271 LSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 87.8 bits (218), Expect = 1e-19
 Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 33/159 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+     ++     L + + T +Y APE++   K Y +  D+WS G I+  ++  
Sbjct: 190 IVDFGLSSFFSKDY----KLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCG 243

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F G++  D +  +                            F     W     N   
Sbjct: 244 YPPFGGQNDQDIIKKVEK----------------------GKYYFDFN-DW----KNISD 276

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A +L+  MLT++ +KR   E+AL   ++++Y +  ++ 
Sbjct: 277 EAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKS 315

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 87.2 bits (216), Expect = 1e-19
 Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 39/171 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG----------YTKSIDIWSV 81
           + DFG+A    P    +      V    Y  PE + +              +   D+WS+
Sbjct: 195 LIDFGIANQMQP-DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253

Query: 82  GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP 141
           GCIL  M   +  F     ++Q+              L  II+            + + P
Sbjct: 254 GCILYYMTYGKTPFQ--QIINQI------------SKLHAIIDPN---------HEIEFP 290

Query: 142 WEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
                   + +  D+L   L  +P +RI + + LAHPY++    P ++   
Sbjct: 291 -----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 336

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 86.4 bits (214), Expect = 1e-19
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 29/159 (18%)

Query: 32  ICDFGLARVADPEHDHTGF-LTEYVATRWYRAPEIM-LNSKGYTKSIDIWSVGCILAEMI 89
           + DFGL++     ++   + +T    T ++ APE++   ++ Y    D WS G +L  ++
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
                FPG +  D ++ +L                   +     L F+    +       
Sbjct: 271 MGAVPFPGVNDADTISQVL-----------------NKK-----LCFENP-NY----NVL 303

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
            P A DLL  +L  N  +R     AL HP++ Q+ D   
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 87.4 bits (217), Expect = 2e-19
 Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 33/159 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+   +        + + + T +Y APE++     Y +  D+WS G IL  ++S 
Sbjct: 170 IIDFGLSTHFEASK----KMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILLSG 223

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F G +  D L  +                            F+    W         
Sbjct: 224 CPPFNGANEYDILKKVEK----------------------GKYTFELP-QW----KKVSE 256

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
           +A DL+ KMLT+ P  RI   DAL H +++ Y       
Sbjct: 257 SAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV 295

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 86.0 bits (213), Expect = 4e-19
 Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 34/157 (21%)

Query: 32  ICDFGLARVADP-EHDHTGFLTEYVATRWYRAPEIMLNS------KGYTKSIDIWSVGCI 84
           I DFGL +  D  +      L     T  +RAPE++  S      +  T+SIDI+S+GC+
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228

Query: 85  LAEMISN-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE 143
              ++S  +  F G  Y  + N I GI                      SL     +   
Sbjct: 229 FYYILSKGKHPF-GDKYSRESNIIRGIF---------------------SLDEMKCLHD- 265

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
               +    A DL+ +M+  +P KR      L HP  
Sbjct: 266 ---RSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 83.9 bits (208), Expect = 6e-19
 Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 40/151 (26%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL         + G  T    T  Y +PE  ++S+ Y K +D++++G ILAE++  
Sbjct: 163 IGDFGLVTSLK----NDGKRTRSKGTLRYMSPEQ-ISSQDYGKEVDLYALGLILAELLH- 216

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
                     +       +      +                                  
Sbjct: 217 ----VCDTAFETSKFFTDLRDGIISDIFD------------------------------K 242

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
               LL K+L+  P  R    + L    + +
Sbjct: 243 KEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 83.5 bits (207), Expect = 8e-19
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 34/152 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+ + +     F   +V T +Y +PE  +N   Y +  DIWS+GC+L E+ + 
Sbjct: 157 LGDFGLARILNHDTS---FAKTFVGTPYYMSPEQ-MNRMSYNEKSDIWSLGCLLYELCAL 212

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F      +    I        P   S                               
Sbjct: 213 MPPFTAFSQKELAGKIREGKFRRIPYRYS------------------------------D 242

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
              +++ +ML    + R  VE+ L +P + ++
Sbjct: 243 ELNEIITRMLNLKDYHRPSVEEILENPLILEH 274

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 83.9 bits (208), Expect = 1e-18
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 32/170 (18%)

Query: 24  YYDPADEP---ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           Y     +    + DFG A+           L     T +Y APE+ L  + Y KS D+WS
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQ-----NALQTPCYTPYYVAPEV-LGPEKYDKSCDMWS 214

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           +G I+  ++   P F           +   +                        F P  
Sbjct: 215 LGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG------------------F-PNP 255

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            W         +A  L+  +L  +P +R+ +   + HP++ Q       P
Sbjct: 256 EW----SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 85.1 bits (211), Expect = 1e-18
 Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 33/158 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+            + + + T +Y APE++     Y +  D+WS G IL  ++S 
Sbjct: 165 IIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYILLSG 218

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F GK+  D L  +                            F     W         
Sbjct: 219 TPPFYGKNEYDILKRVET----------------------GKYAFDLP-QW----RTISD 251

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADE 189
           +A DL+ KMLTF+P  RI     L HP++++Y      
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPT 289

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 84.7 bits (210), Expect = 1e-18
 Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 32/154 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMI 89
           I DFG +++          +     T  Y APE++++    GY +++D WS+G IL   +
Sbjct: 283 ITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           S  P F                   T   L   I   +  Y     F P+  W       
Sbjct: 339 SGYPPFSEHR---------------TQVSLKDQI--TSGKY----NFIPE-VW----AEV 372

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
              ALDL+ K+L  +P  R   E+AL HP+L+  
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 82.0 bits (203), Expect = 4e-18
 Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 40/164 (24%)

Query: 32  ICDFGLARVADPEHDHT-----------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           I DFGLA+      D               LT  + T  Y A E++  +  Y + ID++S
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           +G I  EMI   P   G     +  +IL  L                     S+ F P  
Sbjct: 217 LGIIFFEMIY--PFSTGM----ERVNILKKL------------------RSVSIEFPPDF 252

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYY 184
                  N       ++  ++  +P+KR G    L   +L   +
Sbjct: 253 D-----DNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH 291

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 83.0 bits (205), Expect = 4e-18
 Identities = 42/174 (24%), Positives = 66/174 (37%), Gaps = 28/174 (16%)

Query: 26  DPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 85
           +     I D G A             TE + TR YR+ E+++ S GY    DIWS  C+ 
Sbjct: 231 EKLKVKIADLGNACWVHKHF------TEDIQTRQYRSLEVLIGS-GYNTPADIWSTACMA 283

Query: 86  AEMISNRPIFPGKHYL------DQLNHILGILGSPTPEDLSCIINEKARSY-------LQ 132
            E+ +   +F            D +  I+ +LG   P  L  +  + ++ +         
Sbjct: 284 FELATGDYLFEPHSGEEYTRDEDHIALIIELLGKV-PRKL-IVAGKYSKEFFTKKGDLKH 341

Query: 133 SLPFKPKVPWEILYPNADPNA------LDLLGKMLTFNPHKRIGVEDALAHPYL 180
               KP   +E+L    + +        D L  ML   P KR    + L HP+L
Sbjct: 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 80.9 bits (200), Expect = 9e-18
 Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 42/173 (24%)

Query: 32  ICDFGLARVADPEHD---------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 82
           + DFGL    D + +              T  V T+ Y +PE  ++   Y+  +DI+S+G
Sbjct: 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ-IHGNSYSHKVDIFSLG 217

Query: 83  CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW 142
            IL E++   P       +  L  +  +   P                            
Sbjct: 218 LILFELL--YPFSTQMERVRTLTDVRNLKFPPLFTQKY---------------------- 253

Query: 143 EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRE 195
                   P    ++  ML+ +P +R    + + +   E    P    +  R 
Sbjct: 254 --------PCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKTVLRQRS 298

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 81.7 bits (202), Expect = 1e-17
 Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 28/159 (17%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG A+     +     LT    T +Y APE+ L  + Y KS D+WS+G I+  ++  
Sbjct: 205 LTDFGFAKETTSHNS----LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCG 259

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F   H            G      +   I      +       P   W         
Sbjct: 260 YPPFYSNH------------GLAISPGMKTRIRMGQYEF-------PNPEW----SEVSE 296

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
               L+  +L   P +R+ + + + HP++ Q       P
Sbjct: 297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 335

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 40/160 (25%), Positives = 56/160 (35%), Gaps = 34/160 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA   +           +  T  Y +PE+ L    Y+K +DIW+ G IL  ++  
Sbjct: 172 LADFGLAIEVNDSE----AWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVG 226

Query: 92  RPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            P F  +        I  G    P+P                         W        
Sbjct: 227 YPPFWDEDQHRLYAQIKAGAYDYPSP------------------------EW----DTVT 258

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
           P A  L+  MLT NP KRI  + AL  P++      A   
Sbjct: 259 PEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAI 298

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 80.4 bits (199), Expect = 1e-17
 Identities = 39/160 (24%), Positives = 57/160 (35%), Gaps = 20/160 (12%)

Query: 32  ICDFGLARVADPEHDH----TGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGC 83
           ICDF L        D     T  L     +  Y APE+       +  Y K  D+WS+G 
Sbjct: 155 ICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV 214

Query: 84  ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE 143
           IL  ++S  P F G+   D          +        I   K         F  K  W 
Sbjct: 215 ILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK-------YEFPDK-DW- 265

Query: 144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
               +    A DL+ K+L  +  +R+     L HP+++  
Sbjct: 266 ---AHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 36/160 (22%)

Query: 24  YYDPADEP---ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           Y  P +     I DFGL+++        G ++    T  Y APE+ L  K Y+K++D WS
Sbjct: 139 YLTPEENSKIMITDFGLSKMEQN-----GIMSTACGTPGYVAPEV-LAQKPYSKAVDCWS 192

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           +G I   ++   P F  +        I                  +         F+   
Sbjct: 193 IGVITYILLCGYPPFYEETESKLFEKIK-----------------EGY-----YEFESP- 229

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            W     +   +A D +  +L  +P++R   E AL+HP++
Sbjct: 230 FW----DDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 43/165 (26%), Positives = 61/165 (36%), Gaps = 38/165 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEI-----MLNSKGYTKSIDIWSVGCILA 86
           + DFG +   DP       L E   T  Y APEI       N  GY K +D+WS G I+ 
Sbjct: 165 LTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

Query: 87  EMISNRPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
            +++  P F  +  +  L  I+ G     +P                         W   
Sbjct: 221 TLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP------------------------EW--- 253

Query: 146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
             +      DL+ + L   P KR   E+ALAHP+ +QY       
Sbjct: 254 -DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEVRH 297

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 40/165 (24%), Positives = 59/165 (35%), Gaps = 33/165 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA   +           +  T  Y +PE+ L    Y+K +DIW+ G IL  ++  
Sbjct: 149 LADFGLAIEVNDSE----AWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVG 203

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F  +                    L   I   A  Y       P   W        P
Sbjct: 204 YPPFWDE----------------DQHRLYAQIKAGAYDY-------PSPEW----DTVTP 236

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWREN 196
            A  L+  MLT NP KRI  + AL  P++    +     +  ++ 
Sbjct: 237 EAKSLIDSMLTVNPKKRITADQALKVPWICN-RERVASAIHRQDT 280

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 31/152 (20%), Positives = 45/152 (29%), Gaps = 40/152 (26%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL           G          Y APE++     Y  + D++S+G  + E+  N
Sbjct: 198 LGDFGLLVELGT----AGAGEVQEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVACN 251

Query: 92  RPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
             +    H  +    +  G L       LS                              
Sbjct: 252 MELP---HGGEGWQQLRQGYLPPEFTAGLS------------------------------ 278

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
                +L  ML  +P  R   E  LA P L Q
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 80.1 bits (198), Expect = 3e-17
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 34/152 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG+ARV +   +        + T +Y +PEI   +K Y    DIW++GC+L E+ + 
Sbjct: 166 LGDFGIARVLNSTVE---LARACIGTPYYLSPEI-CENKPYNNKSDIWALGCVLYELCTL 221

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +  F      + +  I+     P     S                               
Sbjct: 222 KHAFEAGSMKNLVLKIISGSFPPVSLHYS------------------------------Y 251

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
           +   L+ ++   NP  R  V   L   ++ + 
Sbjct: 252 DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 78.4 bits (194), Expect = 4e-17
 Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 35/160 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA    P       +   V T +Y +P+++     Y    D WS G ++  ++  
Sbjct: 150 LIDFGLAARFKPGK----MMRTKVGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCG 203

Query: 92  RPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            P F      + +  I  G    P                           W     N  
Sbjct: 204 YPPFSAPTDSEVMLKIREGTFTFPEK------------------------DW----LNVS 235

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
           P A  L+ ++LT +P +RI    AL H + E+    +   
Sbjct: 236 PQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRN 275

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 79.3 bits (196), Expect = 5e-17
 Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 32/154 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMI 89
           I DFG +++          +     T  Y APE++++    GY +++D WS+G IL   +
Sbjct: 158 ITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           S  P F                   T   L   I     ++           W       
Sbjct: 214 SGYPPFSEHR---------------TQVSLKDQITSGKYNF-------IPEVW----AEV 247

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
              ALDL+ K+L  +P  R   E+AL HP+L+  
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 80.5 bits (198), Expect = 5e-17
 Identities = 33/162 (20%), Positives = 50/162 (30%), Gaps = 16/162 (9%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS- 90
           I D G A+  D         TE+V T  Y APE +L  K YT ++D WS G +  E I+ 
Sbjct: 165 IIDLGYAKELDQGE----LCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITG 219

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP-WEILYPNA 149
            RP  P    +     +                         ++ F   +P    L    
Sbjct: 220 FRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT---------GAVKFSSVLPTPNHLSGIL 270

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
                  L  ML ++  +R            +         +
Sbjct: 271 AGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKL 312

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 79.1 bits (195), Expect = 8e-17
 Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 13/153 (8%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM-------LNSKGYTKSIDIWSVGCI 84
           + DFG AR  + +            T  Y  P++         + K Y  ++D+WS+G  
Sbjct: 157 LTDFGAARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212

Query: 85  LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEI 144
                +    F       +   ++  + +  P      + +     +      P      
Sbjct: 213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV--SCS 270

Query: 145 LYPNADPNALDLLGKMLTFNPHKRIGVEDALAH 177
           L          +L  +L  +  K  G +   A 
Sbjct: 271 LSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 79.3 bits (196), Expect = 8e-17
 Identities = 43/159 (27%), Positives = 59/159 (37%), Gaps = 31/159 (19%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA   + E         +  T  Y +PE+ L    Y K +D+W+ G IL  ++  
Sbjct: 154 LADFGLAIEVEGEQQ---AWFGFAGTPGYLSPEV-LRKDPYGKPVDLWACGVILYILLVG 209

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F  +                    L   I   A  +       P   W        P
Sbjct: 210 YPPFWDE----------------DQHRLYQQIKAGAYDF-------PSPEW----DTVTP 242

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A DL+ KMLT NP KRI   +AL HP++      A   
Sbjct: 243 EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCM 281

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 42/153 (27%), Positives = 62/153 (40%), Gaps = 35/153 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+            + + + T +Y APE++     Y +  D+WS G IL  ++S 
Sbjct: 165 IIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYILLSG 218

Query: 92  RPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            P F GK+  D L  +  G      P                         W        
Sbjct: 219 TPPFYGKNEYDILKRVETGKYAFDLP------------------------QW----RTIS 250

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
            +A DL+ KMLTF+P  RI     L HP++++Y
Sbjct: 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 34/160 (21%)

Query: 24  YYDPADEP---ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           Y  PA +    I DFGL+++ + +      +     T  Y APEI L    Y   +D+WS
Sbjct: 181 YATPAPDAPLKIADFGLSKIVEHQ----VLMKTVCGTPGYCAPEI-LRGCAYGPEVDMWS 235

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           VG I   ++     F  +     +                 I+N +         F    
Sbjct: 236 VGIITYILLCGFEPFYDERGDQFM--------------FRRILNCE-------YYFISP- 273

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            W         NA DL+ K++  +P KR+    AL HP++
Sbjct: 274 WW----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 76.1 bits (188), Expect = 4e-16
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 41/157 (26%)

Query: 32  ICDFGLARVADPEHDHT--GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           I DFG +  A         G       T  Y  PE M+  + + + +D+WS+G +  E +
Sbjct: 150 IADFGWSVHAPSSRRTDLCG-------TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 201

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
             +P F    Y +    I  +                          +   P        
Sbjct: 202 VGKPPFEANTYQETYKRISRV--------------------------EFTFP-----DFV 230

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
              A DL+ ++L  NP +R  + + L HP++      
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 267

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 77.1 bits (190), Expect = 4e-16
 Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 38/157 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEI-----MLNSKGYTKSIDIWSVGCILA 86
           + DFG +   +P       L E   T  Y APEI          GY K +D+W+ G IL 
Sbjct: 241 LSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296

Query: 87  EMISNRPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
            +++  P F  +  +  L  I+ G     +P                         W   
Sbjct: 297 TLLAGSPPFWHRRQILMLRMIMEGQYQFSSP------------------------EW--- 329

Query: 146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
             +      DL+ ++L  +P  R+  E AL HP+ E+
Sbjct: 330 -DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 76.7 bits (189), Expect = 5e-16
 Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 32/161 (19%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA   +P+      +    AT  + APEI ++ +      D+W++G +   ++S 
Sbjct: 192 IIDFGLATKLNPDE----IVKVTTATAEFAAPEI-VDREPVGFYTDMWAIGVLGYVLLSG 246

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G+  L+ L ++             C              F     +     +  P
Sbjct: 247 LSPFAGEDDLETLQNV-----------KRCDWE-----------FDED-AF----SSVSP 279

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            A D +  +L   P KR+ V DAL HP+L+  +      + 
Sbjct: 280 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIP 320

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 41/162 (25%)

Query: 32  ICDFGLARVADPEHDHT--GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           I DFG +  A      T  G       T  Y  PE M+  K + + +D+W  G +  E +
Sbjct: 155 IADFGWSVHAPSLRRRTMCG-------TLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFL 206

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
              P F    + +    I+         DL               P           P  
Sbjct: 207 VGMPPFDSPSHTETHRRIVN-------VDLKF-------------P-----------PFL 235

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
              + DL+ K+L ++P +R+ ++  + HP+++        PV
Sbjct: 236 SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 75.8 bits (187), Expect = 7e-16
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 32/159 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA   +              T  + APEI +N +      D+WS+G I   ++S 
Sbjct: 160 LIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSG 214

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G    + L +I            S   +           F  +  +     +   
Sbjct: 215 ASPFLGDTKQETLANI-----------TSVSYD-----------FDEE-FF----SHTSE 247

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A D + K+L     KR+ +++AL HP++    +     
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMV 286

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 76.2 bits (188), Expect = 7e-16
 Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 32/159 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +  FG+A                V T  + APE+ +  + Y K +D+W  G IL  ++S 
Sbjct: 174 LGGFGVAIQLGESGL---VAGGRVGTPHFMAPEV-VKREPYGKPVDVWGCGVILFILLSG 229

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G                        II  K           P+  W     +   
Sbjct: 230 CLPFYGT----------------KERLFEGIIKGK-------YKMNPR-QW----SHISE 261

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
           +A DL+ +ML  +P +RI V +AL HP+L++    A + 
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKI 300

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 75.3 bits (186), Expect = 7e-16
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 34/151 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA +   +       T    T  Y APE+    +  T   DIWS G ++  +++ 
Sbjct: 168 IIDFGLAELFKSDE----HSTNAAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTG 221

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G    +                             +   +  +    +      P
Sbjct: 222 CLPFTGTSLEEVQQKATY----------------------KEPNYAVE-CRPL-----TP 253

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
            A+DLL +MLT +P +R      L H + +Q
Sbjct: 254 QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 75.0 bits (185), Expect = 1e-15
 Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 32/160 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I +FG AR   P                Y APE+       + + D+WS+G ++  ++S 
Sbjct: 145 IIEFGQARQLKPGD----NFRLLFTAPEYYAPEV-HQHDVVSTATDMWSLGTLVYVLLSG 199

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F  +     + +I+                  A        F               
Sbjct: 200 INPFLAETNQQIIENIM-----------------NAEYTFDEEAF----------KEISI 232

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
            A+D + ++L      R+   +AL HP+L+Q  +     V
Sbjct: 233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 75.1 bits (185), Expect = 2e-15
 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 32/159 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA   +              T  + APEI +N +      D+WS+G I   ++S 
Sbjct: 160 LIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSG 214

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G    + L +I            +   +           F  +  +         
Sbjct: 215 ASPFLGDTKQETLANI-----------TAVSYD-----------FDEE-FF----SQTSE 247

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A D + K+L     KR+ +++AL HP++          
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMV 286

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 74.1 bits (183), Expect = 2e-15
 Identities = 29/159 (18%), Positives = 58/159 (36%), Gaps = 32/159 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG+A   +  +           T  + APEI +N +      D+WS+G I   ++S 
Sbjct: 153 LIDFGIAHKIEAGN----EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSG 207

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G+   + L +I            +   +           F  +  +     N   
Sbjct: 208 ASPFLGETKQETLTNI-----------SAVNYD-----------FDEE-YF----SNTSE 240

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            A D + ++L  +P +R+ +  +L H +++         
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRG 279

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 75.3 bits (185), Expect = 2e-15
 Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 32/176 (18%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL    DP+      +     T  + APE+    K      D+WSVG +   ++S 
Sbjct: 298 LIDFGLTAHLDPKQS----VKVTTGTAEFAAPEV-AEGKPVGYYTDMWSVGVLSYILLSG 352

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G++  + L ++                       +    F               
Sbjct: 353 LSPFGGENDDETLRNVK-----------------SCDWNMDDSAF----------SGISE 385

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHK 207
           +  D + K+L  +P+ R+ +  AL HP+L     P  +       + K+      K
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTK 441

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 32/156 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA   D  +           T  + APEI +N +      D+WS+G I   ++S 
Sbjct: 159 IIDFGLAHKIDFGN----EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSG 213

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G    + L ++            +               F+ +  +     N   
Sbjct: 214 ASPFLGDTKQETLANV-----------SAVNYE-----------FEDE-YF----SNTSA 246

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPA 187
            A D + ++L  +P KR+ ++D+L HP+++      
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 73.6 bits (181), Expect = 4e-15
 Identities = 38/165 (23%), Positives = 56/165 (33%), Gaps = 23/165 (13%)

Query: 32  ICDFGLARVADPEHDHT--GFLTEYVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEM 88
           + DFG +     +      G       T  +  PE   N   Y    +DIWS+G  L  M
Sbjct: 193 LSDFGESEYMVDKKIKGSRG-------TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245

Query: 89  ISNRPIFPGKHYLDQL-NHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
             N   F  K  L +L N+I         +++   ++     Y  +          +   
Sbjct: 246 FYNVVPFSLKISLVELFNNIRT-------KNIEYPLDRNHFLYPLTNKKSTCSNNFL--- 295

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
                 +D L   L  NP +RI  EDAL H +L           S
Sbjct: 296 --SNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFS 338

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 32/157 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG++R           L E + T  Y APEI LN    T + D+W++G I   ++++
Sbjct: 175 IVDFGMSRKIGHAC----ELREIMGTPEYLAPEI-LNYDPITTATDMWNIGIIAYMLLTH 229

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G+   +   +I                  +         F           +   
Sbjct: 230 TSPFVGEDNQETYLNIS-----------------QVNVDYSEETF----------SSVSQ 262

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
            A D +  +L  NP KR   E  L+H +L+Q+     
Sbjct: 263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL 299

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 70.7 bits (173), Expect = 5e-14
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 42/159 (26%)

Query: 32  ICDFGLARVADPEHDH---------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 82
           + DFGL    D + +              T  V T+ Y +PE  ++   Y+  +DI+S+G
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQ-IHGNNYSHKVDIFSLG 263

Query: 83  CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW 142
            IL E++             +   I+  +              +   +       P +  
Sbjct: 264 LILFELLY--SFSTQ----MERVRIITDV--------------RNLKF-------PLLFT 296

Query: 143 EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
           +       P    ++  ML+ +P +R    D + +   E
Sbjct: 297 QKY-----PQEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 70.9 bits (174), Expect = 5e-14
 Identities = 40/152 (26%), Positives = 58/152 (38%), Gaps = 32/152 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR   P       L     T  + APE+ +N    +   D+WSVG I   ++S 
Sbjct: 230 IIDFGLARRYKPREK----LKVNFGTPEFLAPEV-VNYDFVSFPTDMWSVGVIAYMLLSG 284

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G +  + LN+IL                   R  L+   F           +   
Sbjct: 285 LSPFLGDNDAETLNNIL-----------------ACRWDLEDEEF----------QDISE 317

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
            A + + K+L      RI   +AL HP+L  +
Sbjct: 318 EAKEFISKLLIKEKSWRISASEALKHPWLSDH 349

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 70.0 bits (172), Expect = 7e-14
 Identities = 32/149 (21%), Positives = 47/149 (31%), Gaps = 31/149 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + D GL R        T      V T +Y +PE  ++  GY    DIWS+GC+L EM + 
Sbjct: 177 LGDLGLGRFFS---SKTTAAHSLVGTPYYMSPER-IHENGYNFKSDIWSLGCLLYEMAAL 232

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +  F G                     L   I +            P +P +        
Sbjct: 233 QSPFYGD--------------KMNLYSLCKKIEQCDY---------PPLPSDHY----SE 265

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
               L+   +  +P KR  V         
Sbjct: 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKR 294

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 69.9 bits (172), Expect = 7e-14
 Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 41/155 (26%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG A+V  PE       + +V T  Y +PE+ L  K   KS D+W++GCI+ ++++ 
Sbjct: 171 ITDFGTAKVLSPESKQARANS-FVGTAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAG 228

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDL-SCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            P F                       +   II  +         F  K           
Sbjct: 229 LPPFRAG----------------NEYLIFQKIIKLE-------YDFPEKF---------F 256

Query: 151 PNALDLLGKMLTFNPHKRIG------VEDALAHPY 179
           P A DL+ K+L  +  KR+G           AHP+
Sbjct: 257 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 69.3 bits (170), Expect = 8e-14
 Identities = 22/149 (14%), Positives = 39/149 (26%), Gaps = 40/149 (26%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D G            G          + A E++  +  +    DI+++   +      
Sbjct: 175 IGDLGHVTRISSPQVEEG-------DSRFLANEVLQENYTHLPKADIFALALTVVCAAGA 227

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P+       DQ + I        P+ LS                               
Sbjct: 228 EPLP---RNGDQWHEIRQGRLPRIPQVLS------------------------------Q 254

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
              +LL  M+  +P +R      + H  L
Sbjct: 255 EFTELLKVMIHPDPERRPSAMALVKHSVL 283

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 70.0 bits (172), Expect = 8e-14
 Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 37/153 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMI 89
           I DF +A +   E   T        T+ Y APE+  + K  GY+ ++D WS+G    E++
Sbjct: 156 ITDFNIAAMLPRETQITTM----AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
             R  +  +              + + E +                        + YP+A
Sbjct: 212 RGRRPYHIRS------------STSSKEIVHTFETTV-----------------VTYPSA 242

Query: 150 -DPNALDLLGKMLTFNPHKRIG-VEDALAHPYL 180
                + LL K+L  NP +R   + D    PY+
Sbjct: 243 WSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 37/162 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA     E+D          T  Y APE +L+ KG++  +D+WS+GCI+  ++  
Sbjct: 156 IGDFGLA--TKVEYD-GERKKVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVG 211

Query: 92  RPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
           +P F      +    I         P+ ++                              
Sbjct: 212 KPPFETSCLKETYLRIKKNEY--SIPKHIN------------------------------ 239

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
           P A  L+ KML  +P  R  + + L   +    Y PA  P++
Sbjct: 240 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPIT 281

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 68.3 bits (168), Expect = 2e-13
 Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 35/155 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA     +  H         T  Y +PE +     +    D+WS+GC+   ++  
Sbjct: 153 IADFGLA--TQLKMPH-EKHYTLCGTPNYISPE-IATRSAHGLESDVWSLGCMFYTLLIG 208

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           RP F      + LN +                      Y        ++P          
Sbjct: 209 RPPFDTDTVKNTLNKV------------------VLADY--------EMP-----SFLSI 237

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
            A DL+ ++L  NP  R+ +   L HP++ +    
Sbjct: 238 EAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSST 272

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 38/156 (24%)

Query: 32  ICDFGLARVADPEHD--HTGFLTEYVATR----WYRAPEIMLNSKGY---TKSIDIWSVG 82
           + D G    A    +        +  A +     YRAPE + + + +    +  D+WS+G
Sbjct: 175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE-LFSVQSHCVIDERTDVWSLG 233

Query: 83  CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW 142
           C+L  M+     +                       ++  +  +      S+P  P+   
Sbjct: 234 CVLYAMMFGEGPYDMVFQKGDS--------------VALAVQNQ-----LSIPQSPRHS- 273

Query: 143 EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHP 178
                        LL  M+T +PH+R  +   L+  
Sbjct: 274 --------SALWQLLNSMMTVDPHQRPHIPLLLSQL 301

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 35/161 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA     E+D          T  Y APE +L+ KG++  +D+WS+GCI+  ++  
Sbjct: 182 IGDFGLA--TKVEYDG-ERKKVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVG 237

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P F      +    I                  K   Y         +P      + +P
Sbjct: 238 KPPFETSCLKETYLRI------------------KKNEY--------SIP-----KHINP 266

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            A  L+ KML  +P  R  + + L   +    Y PA  P++
Sbjct: 267 VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPIT 307

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 68.1 bits (166), Expect = 5e-13
 Identities = 19/162 (11%), Positives = 36/162 (22%), Gaps = 52/162 (32%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM----------LNSKGYTKSIDIWSV 81
           +  F            +        +R +  PE+                 T S D W++
Sbjct: 247 LTGFEHLVRDGARVVSSV-------SRGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299

Query: 82  GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP 141
           G ++  +            L     I       + +++                      
Sbjct: 300 GLVIYWIWCADLPITKDAALGGSEWIF-----RSCKNIP--------------------- 333

Query: 142 WEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
                         LL   L +    R+    A+  P  EQ 
Sbjct: 334 ---------QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 66.1 bits (161), Expect = 3e-12
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 40/154 (25%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA     +  H       V T  Y APE++     Y  S D +S+GC+L +++  
Sbjct: 333 ISDLGLACDFSKKKPHA-----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-D 150
              F      D              E     +                    +  P++  
Sbjct: 388 HSPFRQHKTKD------------KHEIDRMTLTMA-----------------VELPDSFS 418

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
           P    LL  +L  + ++R+G      ++    P+
Sbjct: 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 64.8 bits (158), Expect = 7e-12
 Identities = 35/154 (22%), Positives = 52/154 (33%), Gaps = 38/154 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA         T     Y  T  + APE+ L  + Y  S+D +++G  L EMI+ 
Sbjct: 330 ISDLGLAVELKAGQTKT---KGYAGTPGFMAPEL-LLGEEYDFSVDYFALGVTLYEMIAA 385

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-D 150
           R  F                             E  +  L+           + YP+   
Sbjct: 386 RGPFRA-------------------RGEKVENKELKQRVLEQ---------AVTYPDKFS 417

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
           P + D    +L  +P KR+G      +    HP 
Sbjct: 418 PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 36/154 (23%), Positives = 52/154 (33%), Gaps = 39/154 (25%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA          G     V T  Y APE+ + ++ YT S D W++GC+L EMI+ 
Sbjct: 327 ISDLGLAVHVPEGQTIKGR----VGTVGYMAPEV-VKNERYTFSPDWWALGCLLYEMIAG 381

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA-D 150
           +  F                             E  R   +             Y     
Sbjct: 382 QSPFQQ-------------------RKKKIKREEVERLVKEV---------PEEYSERFS 413

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
           P A  L  ++L  +P +R+G       +   HP 
Sbjct: 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 38/196 (19%), Positives = 59/196 (30%), Gaps = 43/196 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           I   G+A    P             +  ++ PEI      ++   +DIWS G  L  + +
Sbjct: 150 ISALGVAEALHPFAA-DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT 208

Query: 91  NRPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
               F G +      +I  G      P D                               
Sbjct: 209 GLYPFEGDNIYKLFENIGKGSY--AIPGDCG----------------------------- 237

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRI 209
            P   DLL  ML + P KR  +     H +  + + PA+ PV         +  +P  + 
Sbjct: 238 -PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVP--------IPPSPDTKD 288

Query: 210 GVEGALAHPYLEQYYD 225
                   PYLE  + 
Sbjct: 289 RWRSMTVVPYLEDLHG 304

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 61.4 bits (150), Expect = 5e-11
 Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 46/156 (29%)

Query: 32  ICDFGLARVADPEHDHTG-FL--TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + DFGL + +  +   T  F    EY+A      PEI L   G+ +++D WS+G ++ +M
Sbjct: 162 LTDFGLCKESIHDGTVTHTFCGTIEYMA------PEI-LMRSGHNRAVDWWSLGALMYDM 214

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           ++  P F G++                 + +  I+  K       L   P +        
Sbjct: 215 LTGAPPFTGEN---------------RKKTIDKILKCK-------LNLPPYLT------- 245

Query: 149 ADPNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
               A DLL K+L  N   R+G       +  AHP+
Sbjct: 246 --QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 61.6 bits (150), Expect = 5e-11
 Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 31/160 (19%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           I DFGLA V    ++    L +   T  Y APE +L  + +  + +D+WS G +L  M++
Sbjct: 146 ISDFGLATVFRY-NNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDVWSCGIVLTAMLA 203

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               +      DQ +           +                       PW+ +    D
Sbjct: 204 GELPW------DQPSDSCQEYSDWKEKKTYLN------------------PWKKI----D 235

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
              L LL K+L  NP  RI + D     +  +      + 
Sbjct: 236 SAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKR 275

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 31/148 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           I DFGLA V    ++    L +   T  Y APE +L  + +  + +D+WS G +L  M++
Sbjct: 146 ISDFGLATVFRY-NNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDVWSCGIVLTAMLA 203

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               +       Q                S    +K              PW+ +    D
Sbjct: 204 GELPWDQPSDSCQE--------------YSDWKEKK----------TYLNPWKKI----D 235

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHP 178
              L LL K+L  NP  RI + D     
Sbjct: 236 SAPLALLHKILVENPSARITIPDIKKDR 263

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 61.2 bits (149), Expect = 6e-11
 Identities = 30/170 (17%), Positives = 49/170 (28%), Gaps = 52/170 (30%)

Query: 24  YYDPADEP---ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           Y          + DFG A                         E     + Y KS D+WS
Sbjct: 150 YTSKRPNAILKLTDFGFA------------------------KETT--GEKYDKSCDMWS 183

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           +G I+  ++   P F   H L     +            + I   +         F P  
Sbjct: 184 LGVIMYILLCGYPPFYSNHGLAISPGMK-----------TRIRMGQ-------YEF-PNP 224

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            W             L+  +L   P +R+ + + + HP++ Q       P
Sbjct: 225 EW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 61.4 bits (150), Expect = 6e-11
 Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 46/156 (29%)

Query: 32  ICDFGLARVADPEHDHTG-FL--TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + DFGL++ +         F    EY+A      PE+ +N +G+T+S D WS G ++ EM
Sbjct: 167 LTDFGLSKESIDHEKKAYSFCGTVEYMA------PEV-VNRRGHTQSADWWSFGVLMFEM 219

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           ++    F GK                  E ++ I+  K       L     +        
Sbjct: 220 LTGTLPFQGKD---------------RKETMTMILKAK-------LGMPQFLS------- 250

Query: 149 ADPNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
             P A  LL  +   NP  R+G     VE+   H +
Sbjct: 251 --PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 31/152 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           +CDFG A    P+      LT      T  + APE+++  K     +DIWS  C++  M+
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHML 250

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           +    +       +    L I   P P                      ++P     P+ 
Sbjct: 251 NGCHPWTQ---YFRGPLCLKIASEPPP--------------------IREIP-----PSC 282

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
            P     + + L   P  R    +        
Sbjct: 283 APLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 39/161 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           I DFG +            L  +     Y APE +   K Y    +D+WS+G IL  ++S
Sbjct: 155 IADFGFSNEFTVGG----KLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVS 209

Query: 91  NRPIFPGKHYLDQLNHILGILGS-PTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
               F G++  +    +L   G    P  +S                             
Sbjct: 210 GSLPFDGQNLKELRERVLR--GKYRIPFYMS----------------------------- 238

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
             +  +LL + L  NP KR  +E  +   ++   ++  +  
Sbjct: 239 -TDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELK 278

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 60.2 bits (147), Expect = 1e-10
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 53/158 (33%)

Query: 32  ICDFGLARVADPEHDHTGFL---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           I DFG A+      D T  L    +Y+A      PE+ +++K Y KSID WS G ++ EM
Sbjct: 147 ITDFGFAKYVP---DVTYTLCGTPDYIA------PEV-VSTKPYNKSIDWWSFGILIYEM 196

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDL-SCIINEKARSYLQSLPFKPKVPWEILYP 147
           ++    F                           I+N +                 + +P
Sbjct: 197 LAGYTPFYDS----------------NTMKTYEKILNAE-----------------LRFP 223

Query: 148 -NADPNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
              + +  DLL +++T +  +R+G      ED   HP+
Sbjct: 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 35/151 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA +           T      +  APE+    + Y +S+D+++ G  + EM ++
Sbjct: 173 IGDLGLATLKRASFAKAVIGTPE----FM-APEMY--EEKYDESVDVYAFGMCMLEMATS 225

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              +       Q+   +                               V        A P
Sbjct: 226 EYPYSECQNAAQIYRRVT----------------------------SGVKPASFDKVAIP 257

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
              +++   +  N  +R  ++D L H + ++
Sbjct: 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 40/153 (26%), Positives = 54/153 (35%), Gaps = 44/153 (28%)

Query: 32  ICDFGLARVADPEHDHTG-F--LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           I DFG+ +        T  F    +Y+A      PEI L  + Y  S+D WS G +L EM
Sbjct: 159 IADFGMCKENMLGDAKTNTFCGTPDYIA------PEI-LLGQKYNHSVDWWSFGVLLYEM 211

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP- 147
           +  +  F G+                  E    I  +                    YP 
Sbjct: 212 LIGQSPFHGQD---------------EEELFHSIRMD-----------------NPFYPR 239

Query: 148 NADPNALDLLGKMLTFNPHKRIGV-EDALAHPY 179
             +  A DLL K+    P KR+GV  D   HP 
Sbjct: 240 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 272

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 59.4 bits (144), Expect = 3e-10
 Identities = 30/158 (18%), Positives = 49/158 (31%), Gaps = 44/158 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVA---------TRWYRAPEI--MLNSKGYTKSIDIWS 80
           +CDFG A       D++                 T  YR PEI  + ++    +  DIW+
Sbjct: 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA 238

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           +GCIL  +   +  F            L I+                         K  +
Sbjct: 239 LGCILYLLCFRQHPFED-------GAKLRIVNG-----------------------KYSI 268

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHP 178
           P              L+  ML  NP +R+ + + +   
Sbjct: 269 PPHDTQY---TVFHSLIRAMLQVNPEERLSIAEVVHQL 303

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 59.2 bits (144), Expect = 3e-10
 Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 35/154 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMIS 90
           + DFGL++    +        ++  T  Y AP+I+     G+ K++D WS+G ++ E+++
Sbjct: 200 LTDFGLSKEFVADETERA--YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               F                 +   E    I+  +        P+  ++          
Sbjct: 258 GASPFTVDGE-----------KNSQAEISRRILKSE-------PPYPQEMS--------- 290

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
             A DL+ ++L  +P KR+G      ++   H +
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 59.3 bits (143), Expect = 3e-10
 Identities = 18/155 (11%), Positives = 32/155 (20%), Gaps = 41/155 (26%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG----YTKSIDIWSVGCILAE 87
           +  F               +    A     A  ++   +      T + D W++G  +  
Sbjct: 252 LTGFEHLVRDG--ASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309

Query: 88  MISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
           +            L     I                                +P      
Sbjct: 310 IWCADLPNTDDAALGGSEWI--------------------------FRSCKNIP------ 337

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
                   LL   L +    R+    A+  P  EQ
Sbjct: 338 ---QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 59.2 bits (143), Expect = 4e-10
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + D G +         T F      T  ++  E ML++K +   ID + V   +  M+  
Sbjct: 224 LIDLGQSIDMKLFPKGTIFTA-KCETSGFQCVE-MLSNKPWNYQIDYFGVAATVYCMLFG 281

Query: 92  RPIFPGKH 99
             +     
Sbjct: 282 TYMKVKNE 289

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 59.1 bits (143), Expect = 4e-10
 Identities = 42/180 (23%), Positives = 66/180 (36%), Gaps = 29/180 (16%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVA-----TRWYRAPEIMLNSKGYTKSIDIWSVGCILA 86
           +CDFG++          G L + +A     TR Y +PE  L    Y+   DIWS+G  L 
Sbjct: 173 LCDFGVS----------GQLIDSMANSFVGTRSYMSPER-LQGTHYSVQSDIWSMGLSLV 221

Query: 87  EMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
           EM   R PI P      +L     + G             +  +        P   +E+L
Sbjct: 222 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELL 281

Query: 146 Y--PNADPNAL----------DLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSW 193
               N  P  L          D + K L  NP +R  ++  + H ++++      +   W
Sbjct: 282 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGW 341

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 53/158 (33%)

Query: 32  ICDFGLARVADPEHDHTGFL---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + DFG A+        T  L    E +A      PEI+L+ KGY K++D W++G ++ EM
Sbjct: 182 VTDFGFAKRVK---GRTWTLCGTPEALA------PEIILS-KGYNKAVDWWALGVLIYEM 231

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDL-SCIINEKARSYLQSLPFKPKVPWEILYP 147
            +  P F                    P  +   I++ K                 + +P
Sbjct: 232 AAGYPPFFAD----------------QPIQIYEKIVSGK-----------------VRFP 258

Query: 148 -NADPNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
            +   +  DLL  +L  +  KR G     V D   H +
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 36/150 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPE-IMLNSKGYT-KSIDIWSVGCILAEMI 89
           I DFG++            L+  V T  + APE +    K ++ K++D+W++G  L   +
Sbjct: 178 IADFGVSNEFKGSD---ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234

Query: 90  SNRPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
             +  F  +  +   + I    L  P   D++                            
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPDQPDIA---------------------------- 266

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHP 178
              +  DL+ +ML  NP  RI V +   HP
Sbjct: 267 --EDLKDLITRMLDKNPESRIVVPEIKLHP 294

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 58.5 bits (142), Expect = 5e-10
 Identities = 32/157 (20%), Positives = 50/157 (31%), Gaps = 33/157 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           ICDFG ++ +             V T  Y APE +L  + Y  K  D+WS G  L  M+ 
Sbjct: 159 ICDFGYSKSSVLH----SQPKSTVGTPAYIAPE-VLLRQEYDGKIADVWSCGVTLYVMLV 213

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFK-PKVPWEILYPNA 149
               F                    P D       K    + S+ +  P           
Sbjct: 214 GAYPFEDPE---------------EPRDYR-----KTIQRILSVKYSIPDDIR------I 247

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
            P    L+ ++   +P  RI + +   H +  +    
Sbjct: 248 SPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPA 284

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 58.2 bits (141), Expect = 8e-10
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 42/154 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL +    +         +  T  Y APE+ L    Y +++D W +G ++ EM+  
Sbjct: 290 ITDFGLCKEGIKDGATM---KTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCG 345

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP-NAD 150
           R  F  +      +H          +    I+ E                 EI +P    
Sbjct: 346 RLPFYNQ------DH---------EKLFELILME-----------------EIRFPRTLG 373

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
           P A  LL  +L  +P +R+G      ++ + H +
Sbjct: 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 57.7 bits (140), Expect = 8e-10
 Identities = 37/160 (23%), Positives = 54/160 (33%), Gaps = 48/160 (30%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPE-IMLNSKGYTKSIDIWSVGCILAEMIS 90
           I DFG ++     +  T     +  T  Y APE I    +GY K+ DIWS+GC + EM +
Sbjct: 164 ISDFGTSKRLAGINPCT---ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT 220

Query: 91  NRPIFPGKHYLDQLNHILGIL---GS-----PTPEDLSCIINEKARSYLQSLPFKPKVPW 142
            +P F       +L      +   G        PE +S                      
Sbjct: 221 GKPPFY------ELGEPQAAMFKVGMFKVHPEIPESMS---------------------- 252

Query: 143 EILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
                     A   + K    +P KR    D L   +L+ 
Sbjct: 253 --------AEAKAFILKCFEPDPDKRACANDLLVDEFLKV 284

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 34/155 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + D+G+ +      D T   + +  T  Y APEI L  + Y  S+D W++G ++ EM++ 
Sbjct: 151 LTDYGMCKEGLRPGDTT---STFCGTPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAG 206

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP-NAD 150
           R  F      D  +       +        I+ +                 +I  P +  
Sbjct: 207 RSPFDIVGSSDNPD------QNTEDYLFQVILEK-----------------QIRIPRSLS 243

Query: 151 PNALDLLGKMLTFNPHKRIG------VEDALAHPY 179
             A  +L   L  +P +R+G        D   HP+
Sbjct: 244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 26/160 (16%), Positives = 48/160 (30%), Gaps = 44/160 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           + DFG   +           T++  TR Y  PE  +    Y  +S  +WS+G +L +M+ 
Sbjct: 191 LIDFGSGALL-----KDTVYTDFDGTRVYSPPE-WIRYHRYHGRSAAVWSLGILLYDMVC 244

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               F      + +   +        + +S                              
Sbjct: 245 GDIPFEHDE--EIIRGQVFF-----RQRVS------------------------------ 267

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
                L+   L   P  R   E+   HP+++    P +  
Sbjct: 268 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETA 307

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 40/158 (25%)

Query: 32  ICDFGLARVADPEHDHTGFL---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + D+G+ +      D T        Y+A      PEI L  + Y  S+D W++G ++ EM
Sbjct: 194 LTDYGMCKEGLRPGDTTSTFCGTPNYIA------PEI-LRGEDYGFSVDWWALGVLMFEM 246

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP- 147
           ++ R  F      D  +       +        I+ +                 +I  P 
Sbjct: 247 MAGRSPFDIVGSSDNPD------QNTEDYLFQVILEK-----------------QIRIPR 283

Query: 148 NADPNALDLLGKMLTFNPHKRIG------VEDALAHPY 179
           +    A  +L   L  +P +R+G        D   HP+
Sbjct: 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 321

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 57.3 bits (138), Expect = 2e-09
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 42/154 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG+ +    +   T     +  T  Y APEI +  + Y KS+D W+ G +L EM++ 
Sbjct: 483 IADFGMCKENIWDGVTT---KTFCGTPDYIAPEI-IAYQPYGKSVDWWAFGVLLYEMLAG 538

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP-NAD 150
           +  F G+                  E    I+                    + YP +  
Sbjct: 539 QAPFEGED---------------EDELFQSIMEH-----------------NVAYPKSMS 566

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
             A+ +   ++T +P KR+G       D   H +
Sbjct: 567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 600

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 34/154 (22%), Positives = 51/154 (33%), Gaps = 36/154 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDIWSVGCILAE 87
           + DFG       +      +   V T  Y +PEI+         Y    D WS+G  + E
Sbjct: 216 LADFGSCLKLMEDGTVQSSV--AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273

Query: 88  MISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
           M+     F    Y + L    G            I+N K R       F  +V       
Sbjct: 274 MLYGETPF----YAESLVETYG-----------KIMNHKER-----FQFPTQVTD----- 308

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDAL---AHP 178
               NA DL+ +++  +   R+G         HP
Sbjct: 309 -VSENAKDLIRRLIC-SREHRLGQNGIEDFKKHP 340

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 45/155 (29%)

Query: 32  ICDFGLARVADPEHDHTGFL---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + DFGL +     +  T       EY+A      PE+ L+ + Y +++D W +G +L EM
Sbjct: 180 LTDFGLCKENIEHNSTTSTFCGTPEYLA------PEV-LHKQPYDRTVDWWCLGAVLYEM 232

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           +   P F  ++               T E    I+N+        L  KP +        
Sbjct: 233 LYGLPPFYSRN---------------TAEMYDNILNKP-------LQLKPNIT------- 263

Query: 149 ADPNALDLLGKMLTFNPHKRIG----VEDALAHPY 179
              +A  LL  +L  +  KR+G      +  +H +
Sbjct: 264 --NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 48/157 (30%)

Query: 32  ICDFGLARVADPEHDHTGFL---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           I DFG+ +    +   T       +Y+A      PEI +  + Y KS+D W+ G +L EM
Sbjct: 162 IADFGMCKENIWDGVTTKTFCGTPDYIA------PEI-IAYQPYGKSVDWWAFGVLLYEM 214

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP- 147
           ++ +  F G+                  E    I+                    + YP 
Sbjct: 215 LAGQAPFEGED---------------EDELFQSIMEH-----------------NVAYPK 242

Query: 148 NADPNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
           +    A+ +   ++T +P KR+G       D   H +
Sbjct: 243 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 279

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 48/157 (30%)

Query: 32  ICDFGLARVADPEHDHTGFL---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           I DFGL +    +           EY+A      PE+ L    Y +++D W +G ++ EM
Sbjct: 146 ITDFGLCKEGISDGATMKTFCGTPEYLA------PEV-LEDNDYGRAVDWWGLGVVMYEM 198

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP- 147
           +  R  F  +                       I+ E                 EI +P 
Sbjct: 199 MCGRLPFYNQD---------------HERLFELILME-----------------EIRFPR 226

Query: 148 NADPNALDLLGKMLTFNPHKRIG-----VEDALAHPY 179
              P A  LL  +L  +P +R+G      ++ + H +
Sbjct: 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 55.5 bits (134), Expect = 5e-09
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 45/159 (28%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           + DFG A   +           +  T  Y APE +L    Y    +++WS+G  L  ++ 
Sbjct: 171 LIDFGSAAYLERG----KLFYTFCGTIEYCAPE-VLMGNPYRGPELEMWSLGVTLYTLVF 225

Query: 91  NRPIFPGKHYLDQLNHIL-GILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
               F       +L   +   +  P    +S                             
Sbjct: 226 EENPF------CELEETVEAAIHPPYL--VS----------------------------- 248

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
               + L+  +L   P +R  +E  +  P++ Q  + AD
Sbjct: 249 -KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLAD 286

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 55.3 bits (134), Expect = 5e-09
 Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 49/158 (31%)

Query: 32  ICDFGLARVADPEHDHTGFL---TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
           + DFG+ +        T       +Y+A      PEI L    Y  ++D W++G +L EM
Sbjct: 165 LADFGMCKEGICNGVTTATFCGTPDYIA------PEI-LQEMLYGPAVDWWAMGVLLYEM 217

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP- 147
           +     F  ++                 +    I+N+                 E++YP 
Sbjct: 218 LCGHAPFEAEN---------------EDDLFEAILND-----------------EVVYPT 245

Query: 148 NADPNALDLLGKMLTFNPHKRIG------VEDALAHPY 179
               +A  +L   +T NP  R+G          L HP+
Sbjct: 246 WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 44/160 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           + DFG   +      H    T++  TR Y  PE  ++   Y      +WS+G +L +M+ 
Sbjct: 181 LIDFGSGALL-----HDEPYTDFDGTRVYSPPE-WISRHQYHALPATVWSLGILLYDMVC 234

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
                P +   + L   L       P  +S                              
Sbjct: 235 GD--IPFERDQEILEAELHF-----PAHVS------------------------------ 257

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
           P+   L+ + L   P  R  +E+ L  P+++   +     
Sbjct: 258 PDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLN 297

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 55.1 bits (133), Expect = 9e-09
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 38/157 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN------SKGYTKSIDIWSVGCIL 85
           + DFG       +      +   V T  Y +PEI+        +  Y    D W++G   
Sbjct: 203 LADFGSCLKLRADGTVRSLV--AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA 260

Query: 86  AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
            EM   +  F    Y D                           Y + + +K  +   ++
Sbjct: 261 YEMFYGQTPF----YADSTAET----------------------YGKIVHYKEHLSLPLV 294

Query: 146 YPNADPNALDLLGKMLTFNPHKRIGVEDAL---AHPY 179
                  A D + ++L   P  R+G   A     HP+
Sbjct: 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 87
           I DFGLA   +          + V TR Y APE+    +   +     ID++++G +L E
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230

Query: 88  MISNRPIFPGKHYLDQLNHILGILGSPTPEDL-SCIINEKAR 128
           + S      G      L     I   P+ ED+   ++++K R
Sbjct: 231 LASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR 272

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 38/154 (24%), Positives = 53/154 (34%), Gaps = 38/154 (24%)

Query: 32  ICDFGLA-RVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG---YTKSIDIWSVGCILAE 87
           + DFG   ++              V T  Y +PE++ +  G   Y +  D WSVG  L E
Sbjct: 209 LADFGTCMKMNKEGMVRCDTA---VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 265

Query: 88  MISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
           M+     F    Y D L                 I+N K      SL F P         
Sbjct: 266 MLVGDTPF----YADSLVGTYS-----------KIMNHK-----NSLTF-PDDND----- 299

Query: 148 NADPNALDLLGKMLTFNPHKRIG---VEDALAHP 178
                A +L+   LT +   R+G   VE+   H 
Sbjct: 300 -ISKEAKNLICAFLT-DREVRLGRNGVEEIKRHL 331

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 39/161 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           I DFGL+ +         FL     +  Y APE +++ + Y    +DIWS G IL  ++ 
Sbjct: 152 IADFGLSNMMSDGE----FLRTSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLC 206

Query: 91  NRPIFPGKHYLDQLNHILGILGS-PTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
               F  +H       I G  G    PE L+                             
Sbjct: 207 GTLPFDDEHVPTLFKKIRG--GVFYIPEYLN----------------------------- 235

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
             +   LL  ML  +P KR  ++D   H + +Q       P
Sbjct: 236 -RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFP 275

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 39/163 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           I DFGL+ +    +    FL     +  Y APE ++N K Y    +D+WS G +L  M+ 
Sbjct: 149 IADFGLSNIMTDGN----FLKTSCGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLV 203

Query: 91  NRPIFPGKHYLDQLNHILGILGS-PTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
            R  F  +   +    +         P+ LS                             
Sbjct: 204 GRLPFDDEFIPNLFKKVNS--CVYVMPDFLS----------------------------- 232

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            P A  L+ +M+  +P +RI +++    P+          P+ 
Sbjct: 233 -PGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPME 274

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 27/143 (18%), Positives = 40/143 (27%), Gaps = 15/143 (10%)

Query: 32  ICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIM-----LNSKGYTKSIDIWSVGCIL 85
           I D GLA     + +         V T+ Y  PE++      N        D++S G IL
Sbjct: 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242

Query: 86  AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
            E+                 H L        +    +  +K R         P  P    
Sbjct: 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLR---------PSFPNRWS 293

Query: 146 YPNADPNALDLLGKMLTFNPHKR 168
                     L+ +    NP  R
Sbjct: 294 SDECLRQMGKLMTECWAHNPASR 316

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 53.3 bits (128), Expect = 4e-08
 Identities = 38/161 (23%), Positives = 57/161 (35%), Gaps = 39/161 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMIS 90
           I DFGL+ +         FL     +  Y APE +++ + Y    +DIWS G IL  ++ 
Sbjct: 157 IADFGLSNMMSDGE----FLRTSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLC 211

Query: 91  NRPIFPGKHYLDQLNHILGILGS-PTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
               F   H       I    G   TP+ L+                             
Sbjct: 212 GTLPFDDDHVPTLFKKICD--GIFYTPQYLN----------------------------- 240

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
            P+ + LL  ML  +P KR  ++D   H + +Q       P
Sbjct: 241 -PSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFP 280

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           ICDFG A       D    +T    +  + APE +     Y++  D++S G IL E+I+ 
Sbjct: 147 ICDFGTAC------DIQTHMTNNKGSAAWMAPE-VFEGSNYSEKCDVFSWGIILWEVITR 199

Query: 92  RPIFPGKHYLDQ 103
           R  F        
Sbjct: 200 RKPFDEIGGPAF 211

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 17/144 (11%)

Query: 32  ICDFGLARVADPEHDHTGFL-TEYVATRWYRAPEIM-----LNSKGYTKSIDIWSVGCIL 85
           I D GLA   D   D         V T+ Y APE++     +      K  DI+++G + 
Sbjct: 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 247

Query: 86  AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDL-SCIINEKARSYLQSLPFKPKVPWEI 144
            E+   R    G H   QL +   +   P+ E++   +  +K R         P +P   
Sbjct: 248 WEIAR-RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR---------PNIPNRW 297

Query: 145 LYPNADPNALDLLGKMLTFNPHKR 168
               A      ++ +    N   R
Sbjct: 298 QSCEALRVMAKIMRECWYANGAAR 321

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFGL+R+   +            T  + APE +L  +   +  D++S G IL E+ + 
Sbjct: 180 VCDFGLSRL---KASTFLSSKSAAGTPEWMAPE-VLRDEPSNEKSDVYSFGVILWELATL 235

Query: 92  RPIFPGKHYLD 102
           +  +   +   
Sbjct: 236 QQPWGNLNPAQ 246

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR        +          W  APE ++ +  ++K  D+WS G +L E+++ 
Sbjct: 157 ITDFGLAREWHRTTKMSAAGA----YAW-MAPE-VIRASMFSKGSDVWSYGVLLWELLTG 210

Query: 92  RPIFPGKHYL 101
              F G   L
Sbjct: 211 EVPFRGIDGL 220

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 36/174 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM----LNSKGYTKSIDIWSVGCILAE 87
           +CDFG++                     Y APE +         Y    D+WS+G  L E
Sbjct: 166 LCDFGISG----RLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221

Query: 88  MISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
           + + +  +                     E L+ ++ E+           P +P  + + 
Sbjct: 222 LATGQFPYKNCK--------------TDFEVLTKVLQEEP----------PLLPGHMGFS 257

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSW-RENWGKM 200
               +    +   LT +  KR      L H ++++Y     +  SW ++   K 
Sbjct: 258 ---GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKT 308

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 12/77 (15%)

Query: 32  ICDFGLARVADPEHDHTGFL-----------TEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
           + DFGLAR+   E      L              V   ++ APE M+N + Y + +D++S
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE-MINGRSYDEKVDVFS 207

Query: 81  VGCILAEMISNRPIFPG 97
            G +L E+I      P 
Sbjct: 208 FGIVLCEIIGRVNADPD 224

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 32  ICDFGLARVADPEHDHTGF-LTEYVATRWYRAPEIM-----LNSKGYTKSIDIWSVGCIL 85
           I D GLA +     +         V T+ Y APE++     ++     K +DIW+ G +L
Sbjct: 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213

Query: 86  AEMIS 90
            E+  
Sbjct: 214 WEVAR 218

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 10/78 (12%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYR--APEIM--------LNSKGYTKSIDIWSV 81
           I DFGL  ++             +   W    APEI+         +   ++K  D++++
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229

Query: 82  GCILAEMISNRPIFPGKH 99
           G I  E+ +    F  + 
Sbjct: 230 GTIWYELHAREWPFKTQP 247

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 28/139 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGCILAEMI 89
           I DFGLA           F     +  W  APE++    S  Y+   D+++ G +L E++
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILW-MAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           + +  +   +  DQ   I+ ++G               R  L   P   KV       N 
Sbjct: 220 TGQLPYSNINNRDQ---IIEMVG---------------RGSLS--PDLSKVR-----SNC 254

Query: 150 DPNALDLLGKMLTFNPHKR 168
                 L+ + L     +R
Sbjct: 255 PKRMKRLMAECLKKKRDER 273

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMIS 90
           + DFGL++    +  H+  ++  +    + APE +    + YT+  D +S   IL  +++
Sbjct: 170 VADFGLSQ----QSVHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT 223

Query: 91  NRPIFPGKHYLD 102
               F    Y  
Sbjct: 224 GEGPFDEYSYGK 235

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 34/173 (19%), Positives = 67/173 (38%), Gaps = 33/173 (19%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM---LNSKGYTKSIDIWSVGCILAEM 88
           +CDFG++     +   +   T     R Y APE +    + +GY    D+WS+G  L E+
Sbjct: 167 LCDFGISG----QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
            + R  +P  +                 + L+ ++          L    +  +      
Sbjct: 223 ATGRFPYPKWN--------------SVFDQLTQVVKGDP----PQLSNSEEREF------ 258

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSW-RENWGKM 200
             P+ ++ +   LT +  KR   ++ L HP++  Y + A E   +  +   +M
Sbjct: 259 -SPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQM 310

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + D G         +  G+L     T  ++APEI+    G T + DI++VG  LA +  +
Sbjct: 222 LIDLGAVS----RINSFGYL---YGTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLD 272

Query: 92  RPIFPGKH 99
            P   G++
Sbjct: 273 LPTRNGRY 280

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 35/155 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPE---IMLNSKGYTKSIDIWSVGCILAEM 88
           +CDFG++                   + Y APE     LN KGY+   DIWS+G  + E+
Sbjct: 151 MCDFGISG----YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
              R  +                     + L  ++ E +       P  P   +      
Sbjct: 207 AILRFPYDS------WGTPF--------QQLKQVVEEPS-------PQLPADKF------ 239

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
                +D   + L  N  +R    + + HP+   +
Sbjct: 240 -SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGLA++   + D       YV          WY APE + ++    +S D+WS G +
Sbjct: 168 IADFGLAKLLPLDKD------YYVVREPGQSPIFWY-APESLSDNIFSRQS-DVWSFGVV 219

Query: 85  LAEMIS 90
           L E+ +
Sbjct: 220 LYELFT 225

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 29/173 (16%), Positives = 48/173 (27%), Gaps = 22/173 (12%)

Query: 32  ICDFG----LARVADPEHDHTGFLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILA 86
           +        +      +     F    V    + +PE++  N +GY    DI+SVG    
Sbjct: 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 228

Query: 87  EMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY 146
           E+ +    F        L   L     P   D S I  E+             +   +  
Sbjct: 229 ELANGHVPFKDMPATQMLLEKLN-GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTT 287

Query: 147 PNADPNAL----------------DLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
               P+                    + + L  NP  R      L H + +Q 
Sbjct: 288 STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGL +V   + +       +           WY APE +  SK    S D+WS G +
Sbjct: 155 IGDFGLTKVLPQDKEF------FKVKEPGESPIFWY-APESLTESKFSVAS-DVWSFGVV 206

Query: 85  LAEMIS 90
           L E+ +
Sbjct: 207 LYELFT 212

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 45.8 bits (109), Expect = 8e-06
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 23/153 (15%)

Query: 32  ICDFGLAR--VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           I DFG++       +         +V T  + APE+M   +GY    DIWS G    E+ 
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA 221

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           +    +   H    +  ++  L +  P  L   + +K         F+            
Sbjct: 222 TGAAPY---HKYPPMKVLMLTLQNDPPS-LETGVQDKEMLKKYGKSFR------------ 265

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
                 ++   L  +P KR    + L H + ++
Sbjct: 266 -----KMISLCLQKDPEKRPTAAELLRHKFFQK 293

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGL +V   + ++      Y           WY APE +  SK    S D+WS G +
Sbjct: 186 IGDFGLTKVLPQDKEY------YKVKEPGESPIFWY-APESLTESKFSVAS-DVWSFGVV 237

Query: 85  LAEMIS 90
           L E+ +
Sbjct: 238 LYELFT 243

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGL +  + + ++      Y           WY APE ++ SK Y  S D+WS G  
Sbjct: 167 IGDFGLTKAIETDKEY------YTVKDDRDSPVFWY-APECLMQSKFYIAS-DVWSFGVT 218

Query: 85  LAEMIS 90
           L E+++
Sbjct: 219 LHELLT 224

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGLA+     H++      Y           WY APE +   K Y  S D+WS G  
Sbjct: 175 IGDFGLAKAVPEGHEY------YRVREDGDSPVFWY-APECLKEYKFYYAS-DVWSFGVT 226

Query: 85  LAEMIS 90
           L E+++
Sbjct: 227 LYELLT 232

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGL R      D       YV          W  APE +        S D W  G  
Sbjct: 162 IGDFGLMRALPQNDD------HYVMQEHRKVPFAWC-APESLKTRTFSHAS-DTWMFGVT 213

Query: 85  LAEMIS 90
           L EM +
Sbjct: 214 LWEMFT 219

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 5e-05
 Identities = 50/292 (17%), Positives = 91/292 (31%), Gaps = 62/292 (21%)

Query: 40  VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID-IWSVGCILAEMISNR--PIFP 96
           V +    +  FL   + T   R P   + ++ Y +  D +++   + A+   +R  P   
Sbjct: 83  VEEVLRINYKFLMSPIKTE-QRQPS--MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139

Query: 97  GKHYLDQLNH-----ILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW-EILYPNAD 150
            +  L +L       I G+LGS      + +  +   SY        K+ W  +   N+ 
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGK----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIG 210
              L++L K+L      +I   D       +   +      S +    ++L   P++   
Sbjct: 196 ETVLEMLQKLLY-----QI---DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN-- 245

Query: 211 VEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRI-------GVEGALA-----HP 258
               L    L    +       W         FN   +I        V   L+     H 
Sbjct: 246 ---CLL--VLLNVQNAKA----WN-------AFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 259 YLEQYYDPADEPVAEEPFR--FSMELDDLPKETLKR------LIFEETRVFK 302
            L+ +         +            DLP+E L        +I E  R   
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR +  +   T   +  V T  Y APE +   +   KS DI+S G +L E+I+ 
Sbjct: 174 ISDFGLARAS-EKFAQTVMTSRIVGTTAYMAPEALRG-EITPKS-DIYSFGVVLLEIITG 230

Query: 92  RP 93
            P
Sbjct: 231 LP 232

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 10/73 (13%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGCILAEMI 89
           I    +           G +       W  APE +         +S D+WS   +L E++
Sbjct: 154 ISMADVKFS----FQSPGRMYAP---AWV-APEALQKKPEDTNRRSADMWSFAVLLWELV 205

Query: 90  SNRPIFPGKHYLD 102
           +    F     ++
Sbjct: 206 TREVPFADLSNME 218

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.5 bits (100), Expect = 9e-05
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)

Query: 32  ICDFGLARVADPEHDHTGFLTEY-----VATRWYRAPEIMLNS------KGYTKSIDIWS 80
           I DFGL+              +      V T  Y APE++  +      +   K +D+++
Sbjct: 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYA 220

Query: 81  VGCILAEMIS-NRPIFPGKHYLD-QLNHILGILGSPTPEDL-SCIINEKAR 128
           +G I  E+      +FPG+   + Q+     +   PT ED+   +  EK R
Sbjct: 221 LGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQR 271

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGL++    + +       Y A        +WY APE +   K  +KS D+WS G +
Sbjct: 158 ISDFGLSKALRADEN------YYKAQTHGKWPVKWY-APECINYYKFSSKS-DVWSFGVL 209

Query: 85  LAEMIS 90
           + E  S
Sbjct: 210 MWEAFS 215

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGL++    +         Y A        +WY APE +   K  ++S D+WS G  
Sbjct: 151 ISDFGLSKALGADDS------YYTARSAGKWPLKWY-APECINFRKFSSRS-DVWSYGVT 202

Query: 85  LAEMIS 90
           + E +S
Sbjct: 203 MWEALS 208

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG+++    E D T   T    T  Y  PE  +  +   KS D++S G +L E++  
Sbjct: 180 ITDFGISKKG-TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVLFEVLCA 237

Query: 92  RP 93
           R 
Sbjct: 238 RS 239

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR+ + ++++T         +W  APE  L  +   KS D+WS G +L E+ +
Sbjct: 404 VADFGLARLIE-DNEYTARQGAKFPIKWT-APEAALYGRFTIKS-DVWSFGILLTELTT 459

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 15/66 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT-------RWYRAPEIMLNSKGYTKSIDIWSVGCI 84
           I DFGL++    +         Y A        +WY APE +   K  ++S D+WS G  
Sbjct: 477 ISDFGLSKALGADDS------YYTARSAGKWPLKWY-APECINFRKFSSRS-DVWSYGVT 528

Query: 85  LAEMIS 90
           + E +S
Sbjct: 529 MWEALS 534

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR+ + ++++T         +W  APE  L  +   KS D+WS G +L E+ +
Sbjct: 321 VADFGLARLIE-DNEYTARQGAKFPIKWT-APEAALYGRFTIKS-DVWSFGILLTELTT 376

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 32  ICDFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFG+A    D +    G     V T +Y APE    S    ++ DI+++ C+L E ++
Sbjct: 175 LVDFGIASATTDEKLTQLGNT---VGTLYYMAPERFSESHATYRA-DIYALTCVLYECLT 230

Query: 91  NRPIFPG 97
             P + G
Sbjct: 231 GSPPYQG 237

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 11/61 (18%)

Query: 32  ICDFGLARVADPEHDHTGFLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           + D G++    P+        +       W   PE + N K    + D WS G  L E+ 
Sbjct: 162 LSDPGISITVLPK--------DILQERIPWV-PPECIENPKNLNLATDKWSFGTTLWEIC 212

Query: 90  S 90
           S
Sbjct: 213 S 213

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 14/65 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT------RWYRAPEIMLNSKGYTKSIDIWSVGCIL 85
           I DFGLA++   E        EY A       +W  A E +L+     +S D+WS G  +
Sbjct: 158 ITDFGLAKLLGAEEK------EYHAEGGKVPIKWM-ALESILHRIYTHQS-DVWSYGVTV 209

Query: 86  AEMIS 90
            E+++
Sbjct: 210 WELMT 214

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 39.7 bits (93), Expect = 8e-04
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 13/65 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT------RWYRAPEIMLNSKGYTKSIDIWSVGCIL 85
           + DFGL RV + + +       Y         RW  +PE +   K  + S D+WS G +L
Sbjct: 188 VSDFGLGRVLEDDPE-----AAYTTRGGKIPIRWT-SPEAIAYRKFTSAS-DVWSYGIVL 240

Query: 86  AEMIS 90
            E++S
Sbjct: 241 WEVMS 245

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 39.6 bits (93), Expect = 9e-04
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 13/65 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVAT------RWYRAPEIMLNSKGYTKSIDIWSVGCIL 85
           + DFGL+RV + + D       Y  T      RW  APE +      + S D+WS G ++
Sbjct: 192 VSDFGLSRVLEDDPD-----AAYTTTGGKIPIRWT-APEAIAFRTFSSAS-DVWSFGVVM 244

Query: 86  AEMIS 90
            E+++
Sbjct: 245 WEVLA 249

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	308
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.98
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.98
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.98
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.98
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.96
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.95
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.95
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.95
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.95
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.95
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.95
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.95
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.95
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.95
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.95
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.94
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.94
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.94
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
3bhy_A	283	Death-associated protein kinase 3; death associate	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.94
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.94
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.93
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.93
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.93
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.93
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.93
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.93
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.93
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.93
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.93
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.93
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.93
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.93
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.92
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.92
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.92
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.92
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.92
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.92
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.92
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.92
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.92
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.92
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.92
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.91
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.91
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.91
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.91
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.91
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.91
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.91
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.91
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.91
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.91
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.91
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.91
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.91
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.91
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.91
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.91
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.91
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.91
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.91
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.91
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.9
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.9
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.9
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.9
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.9
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.9
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.9
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.9
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.9
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.9
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.9
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.9
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.9
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.9
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.9
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.9
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.9
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.9
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.9
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.9
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.9
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.9
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.9
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.9
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.89
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.89
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.89
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.89
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.89
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.89
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.89
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.89
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.89
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.89
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.88
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.88
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.88
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.88
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.88
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.87
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.87
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.87
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.86
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.82
3uqc_A	286	Probable conserved transmembrane protein; structur	99.7
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.63
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.07
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.28
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.87
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	96.87
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	96.77
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.72
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.14
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	96.06
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	95.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	95.93
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	95.66
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	95.64
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	95.52
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.5
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	95.46
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	95.21
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	95.21
3o0g_A	292	Cell division protein kinase 5; kinase activator c	95.11
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	95.01
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	94.93
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	94.92
3niz_A	311	Rhodanese family protein; structural genomics, str	94.91
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	94.82
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	94.64
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	94.56
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	94.5
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	94.43
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	94.36
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	94.29
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	94.28
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	94.26
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	94.26
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	94.23
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	94.19
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	94.08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	94.05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	93.94
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	93.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	93.82
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	93.82
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	93.78
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	93.6
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	93.46
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	93.45
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	93.44
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	93.41
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	93.1
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	93.09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	93.09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	93.01
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	92.58
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	92.47
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	92.27
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	92.13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	92.12
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	92.05
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	91.92
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	91.92
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	91.88
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	91.81
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	91.74
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	91.74
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	91.7
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	91.68
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	91.64
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	91.63
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	91.62
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	91.6
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	91.57
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	91.48
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	91.48
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	91.46
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	91.45
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	91.42
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	91.41
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	91.36
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	91.35
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	91.34
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	91.29
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	91.26
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	91.16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	91.14
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	91.04
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	90.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	90.88
3fme_A	290	Dual specificity mitogen-activated protein kinase;	90.83
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	90.83
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	90.82
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	90.8
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	90.76
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	90.7
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	90.64
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	90.6
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	90.48
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	90.43
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	90.36
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	90.3
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	90.29
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	90.22
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	90.1
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	89.99
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	89.87
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	89.86
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	89.74
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	89.64
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	89.62
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	89.59
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	89.55
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	89.55
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	89.49
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	89.47
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	89.12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	89.1
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	89.1
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	89.07
3bhy_A	283	Death-associated protein kinase 3; death associate	88.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	88.93
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	88.89
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	88.83
2dyl_A	318	Dual specificity mitogen-activated protein kinase	88.65
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	88.53
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	88.49
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	88.42
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	88.42
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	88.4
3an0_A	340	Dual specificity mitogen-activated protein kinase;	88.37
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	88.18
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	88.18
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	87.86
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	87.8
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	87.75
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	87.6
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	87.46
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	87.24
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	87.16
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	87.16
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	86.99
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	86.75
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	86.58
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	86.4
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	86.27
3aln_A	327	Dual specificity mitogen-activated protein kinase;	86.21
3ats_A	357	Putative uncharacterized protein; hypothetical pro	86.05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	85.82
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	85.25
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	85.22
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	85.2
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	84.73
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	84.44
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	84.26
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	84.09
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	83.67
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	83.65
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	82.77
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	82.65
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	82.62
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	82.44
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	80.53
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	80.3

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.7e-48  Score=346.20  Aligned_cols=215  Identities=45%  Similarity=0.852  Sum_probs=184.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCC-CCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .+|.+||+|||+|+.+.... ......++.+||++|+|||++.+...|+.++||||+||+
T Consensus       180 iHRDlKP~NIl~~-------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~i  252 (398)
T 4b99_A          180 IHRDLKPSNLLVN-------ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCI  252 (398)
T ss_dssp             BCCCCCGGGEEEC-------TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred             cCCCcCccccccC-------CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHH
Confidence            6999999999999       89999999999998764332 122235678999999999999876678999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|++||.|.+..+++..|....|.|+...+..........+....+.....++..+++.+++++++||.+||++|
T Consensus       253 l~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d  332 (398)
T 4b99_A          253 FGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFE  332 (398)
T ss_dssp             HHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCC
Confidence            99999999999999999999999999999999988888777788888899998999999999999999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFN  244 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  244 (308)
                      |.+|+||+|+|+||||+.                                                              
T Consensus       333 P~~R~ta~e~L~Hp~f~~--------------------------------------------------------------  350 (398)
T 4b99_A          333 PSARISAAAALRHPFLAK--------------------------------------------------------------  350 (398)
T ss_dssp             TTTSCCHHHHTTSGGGTT--------------------------------------------------------------
T ss_pred             hhHCcCHHHHhcCHhhCc--------------------------------------------------------------
Confidence            999999999999999954                                                              


Q ss_pred             CCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhccCCCC
Q psy7274         245 PHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQEDPN  307 (308)
Q Consensus       245 p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  307 (308)
                                        +++|.++|.+..+|+++++...++.+++|++|++||..||..+++
T Consensus       351 ------------------~~~p~~~p~~~~~~~~~~~~~~~~~~~~k~~i~~ei~~~~~~r~~  395 (398)
T 4b99_A          351 ------------------YHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREG  395 (398)
T ss_dssp             ------------------TCCGGGSCCCSSCCCCHHHHSCCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             ------------------CCCCccccCCCCCCCCccchhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence                              345666777777899988888899999999999999999876554

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.7e-40  Score=293.44  Aligned_cols=206  Identities=39%  Similarity=0.693  Sum_probs=176.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      .+..+||++|+|||++.+...++.++||||+||++
T Consensus       150 vH~Dlkp~NIll~-------~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  216 (367)
T 1cm8_A          150 IHRDLKPGNLAVN-------EDCELKILDFGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM  216 (367)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH
T ss_pred             cccCcCHHHEEEc-------CCCCEEEEeeecccccccc------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHH
Confidence            6999999999999       8999999999999876432      35578999999999998756799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+..+++..|....|.|+.+.+..+.......+...++......+...++.+++.+.+||.+||+.||
T Consensus       217 ~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP  296 (367)
T 1cm8_A          217 AEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDA  296 (367)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999999999999999999999999888888899999999888889999999999999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNP  245 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p  245 (308)
                      .+|+|++++|+||||+.+                                                              
T Consensus       297 ~~R~t~~e~l~hp~f~~~--------------------------------------------------------------  314 (367)
T 1cm8_A          297 EQRVTAGEALAHPYFESL--------------------------------------------------------------  314 (367)
T ss_dssp             TTSCCHHHHHHSGGGTTT--------------------------------------------------------------
T ss_pred             hHCCCHHHHhcChHHHhh--------------------------------------------------------------
Confidence            999999999999999553                                                              


Q ss_pred             CCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhccCC
Q psy7274         246 HKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQED  305 (308)
Q Consensus       246 ~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  305 (308)
                                        +++.++|.+. +|++++++.+.+.++|++++++|+..|++..
T Consensus       315 ------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (367)
T 1cm8_A          315 ------------------HDTEDEPQVQ-KYDDSFDDVDRTLDEWKRVTYKEVLSFKPPR  355 (367)
T ss_dssp             ------------------C------CCC-CCCCC-----CCHHHHHHHHHHHHHTCCC--
T ss_pred             ------------------cCCccCCCCC-CCCCChhhhcCCHHHHHHHHHHHHHHhcccc
Confidence                              3444455543 5788888778899999999999999999764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.3e-40  Score=295.38  Aligned_cols=207  Identities=45%  Similarity=0.761  Sum_probs=174.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.....      .+..+||++|+|||++.+...++.++||||+||+
T Consensus       153 ivH~Dlkp~NIll~-------~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  219 (367)
T 2fst_X          153 IIHRDLKPSNLAVN-------EDCELKILDFGLARHTADE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  219 (367)
T ss_dssp             CCCCCCCGGGEEEC-------TTCCEEECC---------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHH
T ss_pred             eeeCCCCHhhEEEC-------CCCCEEEeecccccccccc------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHH
Confidence            37999999999999       8999999999999875432      3557899999999998765679999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|++||.+.+..+++..|...+|.|..+.+..+.......+...++..+...+...++..++.+.+||.+||+.|
T Consensus       220 l~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~d  299 (367)
T 2fst_X          220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD  299 (367)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999988888888999999888888888899999999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFN  244 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  244 (308)
                      |.+|||++++|+||||+.+                                                             
T Consensus       300 P~~R~t~~e~L~hp~~~~~-------------------------------------------------------------  318 (367)
T 2fst_X          300 SDKRITAAQALAHAYFAQY-------------------------------------------------------------  318 (367)
T ss_dssp             GGGSCCHHHHHTSGGGTTT-------------------------------------------------------------
T ss_pred             cccCcCHHHHhcChhhhhc-------------------------------------------------------------
Confidence            9999999999999999543                                                             


Q ss_pred             CCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhccCC
Q psy7274         245 PHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQED  305 (308)
Q Consensus       245 p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  305 (308)
                                         ++|.++|.+. +|+++++..+++.++|++++|+|+..|++..
T Consensus       319 -------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  359 (367)
T 2fst_X          319 -------------------HDPDDEPVAD-PYDQSLESRDLLIDEWKSLTYDEVISFVPPP  359 (367)
T ss_dssp             -------------------CCGGGCCCCC-CCCGGGSSCCCCHHHHHHHHHHHHHHCCCCC
T ss_pred             -------------------cCCCCCCCCC-CCCcchhhccCCHHHHHHHHHHHHHHhccCc
Confidence                               3444455554 6888888788999999999999999999753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6.8e-40  Score=298.54  Aligned_cols=213  Identities=37%  Similarity=0.680  Sum_probs=175.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-------------------CCCccCcccccccchhhHh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-------------------TGFLTEYVATRWYRAPEIM   66 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~l   66 (308)
                      .||||||+|||++       .+|.+||+|||+|+........                   ...++.++||++|+|||++
T Consensus       151 vHrDlkp~NILl~-------~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~  223 (432)
T 3n9x_A          151 IHRDLKPANCLLN-------QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI  223 (432)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHH
T ss_pred             CCCCCCHHHeEEC-------CCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHH
Confidence            6999999999999       8999999999999976543211                   0124778999999999998


Q ss_pred             hCCCCCCchhhHHHHHHHHHHHhh-----------CCCCCCCCC-----------------HHHHHHHHHHhhCCCChhh
Q psy7274          67 LNSKGYTKSIDIWSVGCILAEMIS-----------NRPIFPGKH-----------------YLDQLNHILGILGSPTPED  118 (308)
Q Consensus        67 ~~~~~~~~~~DiWSlG~il~ell~-----------g~~pf~~~~-----------------~~~~l~~i~~~~~~p~~~~  118 (308)
                      .....|+.++||||+||+++||++           |.++|+|.+                 ..+++..|.+.+|.|+.+.
T Consensus       224 ~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~  303 (432)
T 3n9x_A          224 LLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDD  303 (432)
T ss_dssp             TTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHH
T ss_pred             hcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHH
Confidence            766779999999999999999997           677887765                 4789999999999999999


Q ss_pred             HhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccccCCCCCCchhhhhhh
Q psy7274         119 LSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWG  198 (308)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~  198 (308)
                      +..+.......+....+.....++...++.+++++++||.+||+.||.+|||++|+|+||||+.+               
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~---------------  368 (432)
T 3n9x_A          304 LKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV---------------  368 (432)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT---------------
T ss_pred             HHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc---------------
Confidence            99988889999999999888888888899999999999999999999999999999999999664               


Q ss_pred             hhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCCCCCCCcc
Q psy7274         199 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRF  278 (308)
Q Consensus       199 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  278 (308)
                                                                                       +.+..++.+..++.+
T Consensus       369 -----------------------------------------------------------------~~~~~e~~~~~~~~~  383 (432)
T 3n9x_A          369 -----------------------------------------------------------------RKKKLENFSTKKIIL  383 (432)
T ss_dssp             -----------------------------------------------------------------CCTTTC---CCCCCC
T ss_pred             -----------------------------------------------------------------cCcccCcCCCCCCCC
Confidence                                                                             333344444445555


Q ss_pred             cccc-CCCCHHHHHHHHHHHHhhhccCC
Q psy7274         279 SMEL-DDLPKETLKRLIFEETRVFKQED  305 (308)
Q Consensus       279 ~~~~-~~~~~~~~~~~~~~e~~~~~~~~  305 (308)
                      +|++ ..++.+++|++|++||.+|+++.
T Consensus       384 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~  411 (432)
T 3n9x_A          384 PFDDWMVLSETQLRYIFLKEVQSFHPEL  411 (432)
T ss_dssp             SSCTTCCCCHHHHHHHHHHHHHHHCTTC
T ss_pred             ChhhcccCCHHHHHHHHHHHHHHhCccc
Confidence            5554 56899999999999999999764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=9.9e-40  Score=299.70  Aligned_cols=172  Identities=40%  Similarity=0.785  Sum_probs=146.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC------------------------CCCccCccccccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH------------------------TGFLTEYVATRWY   60 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~------------------------~~~~~~~~gt~~y   60 (308)
                      -.||||||+|||++       .++.+||+|||+|+........                        ....+.++||++|
T Consensus       177 iiHrDlKp~NILl~-------~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  249 (458)
T 3rp9_A          177 ILHRDLKPANCLVN-------QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWY  249 (458)
T ss_dssp             CBCCCCCGGGEEEC-------TTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTT
T ss_pred             cCCCCCChhhEEEC-------CCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccc
Confidence            37999999999999       8999999999999876432211                        1135677999999


Q ss_pred             chhhHhhCCCCCCchhhHHHHHHHHHHHhh-----------CCCCCCCCC--------------------HHHHHHHHHH
Q psy7274          61 RAPEIMLNSKGYTKSIDIWSVGCILAEMIS-----------NRPIFPGKH--------------------YLDQLNHILG  109 (308)
Q Consensus        61 ~aPE~l~~~~~~~~~~DiWSlG~il~ell~-----------g~~pf~~~~--------------------~~~~l~~i~~  109 (308)
                      +|||++.....|+.++||||+||++|||++           |+++|+|.+                    ..+++..|..
T Consensus       250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  329 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN  329 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHH
T ss_pred             cChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHH
Confidence            999998766779999999999999999998           788998865                    3688999999


Q ss_pred             hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         110 ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       110 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .+|.|+.+.+..+.......+....+......+...++.+++++++||.+||++||.+|+|++|+|+||||+.+
T Consensus       330 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV  403 (458)
T ss_dssp             HHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence            99999999999998888999999999988899999999999999999999999999999999999999999764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.9e-40  Score=293.83  Aligned_cols=211  Identities=36%  Similarity=0.673  Sum_probs=159.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC------------------CCCCccCcccccccchhhHhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD------------------HTGFLTEYVATRWYRAPEIML   67 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~------------------~~~~~~~~~gt~~y~aPE~l~   67 (308)
                      .||||||+|||++       .++.+||+|||+|+.......                  .....+.++||++|+|||++.
T Consensus       131 vHrDlkp~NIll~-------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  203 (388)
T 3oz6_A          131 LHRDMKPSNILLN-------AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL  203 (388)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHT
T ss_pred             EeCCCCHHHeEEc-------CCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhc
Confidence            6999999999999       899999999999987543110                  112246679999999999998


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCC---CCCCccc
Q psy7274          68 NSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFK---PKVPWEI  144 (308)
Q Consensus        68 ~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  144 (308)
                      +...|+.++||||+||+++||++|++||.+.+..+++..|...+|.|..+.+..+.......+...++..   ....+..
T Consensus       204 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (388)
T 3oz6_A          204 GSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRD  283 (388)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCC
T ss_pred             CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHH
Confidence            7667999999999999999999999999999999999999999999999887655443333332222111   1111122


Q ss_pred             cC-------------CCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccc
Q psy7274         145 LY-------------PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGV  211 (308)
Q Consensus       145 ~~-------------~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  211 (308)
                      .+             ..+++++.+||.+||+.||.+|||++|+|+||||+.+                            
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~----------------------------  335 (388)
T 3oz6_A          284 IFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF----------------------------  335 (388)
T ss_dssp             CHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT----------------------------
T ss_pred             hCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh----------------------------
Confidence            22             2678999999999999999999999999999999543                            


Q ss_pred             cccccccccccccCCCCCcccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCCCCCCCcccccc-CCCCHHHH
Q psy7274         212 EGALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMEL-DDLPKETL  290 (308)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  290 (308)
                                                                          +++.++|.+...+.++++. ...+.+++
T Consensus       336 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (388)
T 3oz6_A          336 ----------------------------------------------------HNPNEEPNCDHIITIPINDNVKHSIDDY  363 (388)
T ss_dssp             ----------------------------------------------------CCGGGCCCCSSCCCCC------CCHHHH
T ss_pred             ----------------------------------------------------cCCccCCCCCCCCCCCccccccCCHHHH
Confidence                                                                4455566666667777653 56799999


Q ss_pred             HHHHHHHHhhhcc
Q psy7274         291 KRLIFEETRVFKQ  303 (308)
Q Consensus       291 ~~~~~~e~~~~~~  303 (308)
                      |+++|+||..|++
T Consensus       364 ~~~~~~~~~~~~~  376 (388)
T 3oz6_A          364 RNLVYSEISRRKR  376 (388)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhh
Confidence            9999999999885

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2e-38  Score=282.64  Aligned_cols=213  Identities=78%  Similarity=1.280  Sum_probs=181.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+............+..+||++|+|||++.+...++.++||||+||++
T Consensus       150 vH~Dikp~NIl~~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  222 (364)
T 3qyz_A          150 LHRDLKPSNLLLN-------TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL  222 (364)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHH
T ss_pred             ecCCCChHhEEEC-------CCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHH
Confidence            6999999999999       899999999999987765433333346679999999999987767799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+++..+...+|.|..+.+..........+....+.....++...++.+++++.+||.+||+.||
T Consensus       223 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  302 (364)
T 3qyz_A          223 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNP  302 (364)
T ss_dssp             HHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999999999999999999999999888888888888888888889999999999999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNP  245 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p  245 (308)
                      .+|||++|+|+||||+.+                                                              
T Consensus       303 ~~R~t~~e~l~hp~~~~~--------------------------------------------------------------  320 (364)
T 3qyz_A          303 HKRIEVEQALAHPYLEQY--------------------------------------------------------------  320 (364)
T ss_dssp             TTSCCHHHHHTSGGGTTT--------------------------------------------------------------
T ss_pred             hhCCCHHHHhcCcchhhc--------------------------------------------------------------
Confidence            999999999999999653                                                              


Q ss_pred             CCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhccCC
Q psy7274         246 HKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQED  305 (308)
Q Consensus       246 ~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  305 (308)
                                        .++..++....+|.++.+..+++.+.++++|++|+.+|++..
T Consensus       321 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  362 (364)
T 3qyz_A          321 ------------------YDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY  362 (364)
T ss_dssp             ------------------CCGGGSCCCSSCCCCC-----CCHHHHHHHHHHHTGGGCC--
T ss_pred             ------------------cCcccccCCCCcCCcccccccCCHHHHHHHHHHHHHHhhhhc
Confidence                              122234444556777776677899999999999999999865

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=3.8e-38  Score=289.13  Aligned_cols=166  Identities=40%  Similarity=0.797  Sum_probs=136.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......    ..+..+||++|+|||++.+ ..|+.++||||+||+
T Consensus       185 iiHrDlkp~NIll~-------~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i  252 (464)
T 3ttj_A          185 IIHRDLKPSNIVVK-------SDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI  252 (464)
T ss_dssp             CCCCCCCGGGEEEC-------TTSCEEECCCCCC-----CC----CC----CCCTTCCHHHHTT-CCCCTTHHHHHHHHH
T ss_pred             cccCCCChHhEEEe-------CCCCEEEEEEEeeeecCCCc----ccCCCcccccccCHHHHcC-CCCCHHHHHHHHHHH
Confidence            36999999999999       89999999999998765432    2466799999999999876 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCC------------Chh
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA------------DPN  152 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------s~~  152 (308)
                      ++||++|++||.|.+..+++..|...+|.|.++.+..+. .....+....+......+...++..            +++
T Consensus       253 l~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  331 (464)
T 3ttj_A          253 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ  331 (464)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC-HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc-hhhhhHhhcccccCCCChHHhCcccccccccccccccCHH
Confidence            999999999999999999999999999999998887653 4566777777766666665555443            678


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       153 ~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      +++||.+||++||.+|||++|+|+||||+.+
T Consensus       332 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          332 ARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence            9999999999999999999999999999654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.8e-38  Score=280.31  Aligned_cols=171  Identities=27%  Similarity=0.404  Sum_probs=121.3

Q ss_pred             CCCCCCCCCcccCccccccCCC-CCceEeccCCccccCCCCC-------------------------CCCCccCcccccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDP-ADEPICDFGLARVADPEHD-------------------------HTGFLTEYVATRW   59 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~-~~~ki~DFGla~~~~~~~~-------------------------~~~~~~~~~gt~~   59 (308)
                      .||||||+|||++       .+ +.+||+|||+|+.......                         .....++.+||++
T Consensus       139 iHRDiKPeNiLl~-------~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~  211 (361)
T 4f9c_A          139 VHRDVKPSNFLYN-------RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPG  211 (361)
T ss_dssp             ECSCCSGGGEEEE-------TTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGG
T ss_pred             EeCcCCHHHeEEe-------CCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCcc
Confidence            6999999999998       54 7999999999986543211                         0112456799999


Q ss_pred             cchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCC-CCCCHHHHHHHHHHhhCCCChhhHhhhhh--------------
Q psy7274          60 YRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIF-PGKHYLDQLNHILGILGSPTPEDLSCIIN--------------  124 (308)
Q Consensus        60 y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf-~~~~~~~~l~~i~~~~~~p~~~~~~~~~~--------------  124 (308)
                      |+|||++.+...|+.++||||+||++|||++|+.|| .+.+..+++..|...+|++..........              
T Consensus       212 Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~  291 (361)
T 4f9c_A          212 FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDL  291 (361)
T ss_dssp             GCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCH
T ss_pred             ccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhh
Confidence            999999987667999999999999999999999877 67788999999999998654433221110              


Q ss_pred             ----HHHHHHhhcCCC-----CCCCCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         125 ----EKARSYLQSLPF-----KPKVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       125 ----~~~~~~~~~~~~-----~~~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                          ..........+.     .........+..+|++++|||.+||++||++|+||+|+|+||||+++
T Consensus       292 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          292 RKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             HHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             hHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                000000000000     00111122356789999999999999999999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4e-38  Score=271.85  Aligned_cols=138  Identities=30%  Similarity=0.515  Sum_probs=116.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.+..... .....+.|||+.|+|||++.+ ..|+.++||||+||++
T Consensus       154 iHRDlKPeNILl~-------~~g~vKl~DFGla~~~~~~~~-~~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvil  224 (311)
T 4aw0_A          154 IHRDLKPENILLN-------EDMHIQITDFGTAKVLSPESK-QARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCII  224 (311)
T ss_dssp             ECSCCSGGGEEEC-------TTSCEEECCCTTCEECCTTTT-CCCBCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHH
T ss_pred             ccCCCCHHHeEEc-------CCCCEEEEEcCCceecCCCCC-cccccCcccCcccCCHHHHcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       899999999999998754322 223567899999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|++||.+.+..+.+..|...--.                               +...+|+++++||.+||+.||
T Consensus       225 yeml~G~~PF~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~dli~~lL~~dp  273 (311)
T 4aw0_A          225 YQLVAGLPPFRAGNEGLIFAKIIKLEYD-------------------------------FPEKFFPKARDLVEKLLVLDA  273 (311)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCC-------------------------------CCTTCCHHHHHHHHHHSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCC-------------------------------CCcccCHHHHHHHHHHccCCH
Confidence            9999999999999988877777642110                               113568999999999999999


Q ss_pred             CCCCCHHH------HhcCCccccc
Q psy7274         166 HKRIGVED------ALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~e------il~hp~f~~~  183 (308)
                      .+|+|++|      +++||||+++
T Consensus       274 ~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          274 TKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             GGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             hHCcChHHHcCCHHHHCCCCcCCC
Confidence            99999987      5899999764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=8.8e-38  Score=273.61  Aligned_cols=139  Identities=24%  Similarity=0.414  Sum_probs=116.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .+|.+||+|||+|+.......   ..++.+||++|+|||++. +..|+.++||||+||++
T Consensus       192 iHRDlKp~NILl~-------~~g~vKl~DFGla~~~~~~~~---~~~~~~GTp~YmAPEvl~-~~~y~~~~DiWSlGvil  260 (346)
T 4fih_A          192 IHRDIKSDSILLT-------HDGRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMAPELIS-RLPYGPEVDIWSLGIMV  260 (346)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCCTTCEECCSSSC---CBCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHH
T ss_pred             ccccCCHHHEEEC-------CCCCEEEecCcCceecCCCCC---cccccccCcCcCCHHHHC-CCCCCcHHHHHHHHHHH
Confidence            5999999999999       899999999999998754322   246789999999999985 46699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..|....... .                           ..+..+|+++++||.+||+.||
T Consensus       261 yeml~G~~PF~~~~~~~~~~~i~~~~~~~-~---------------------------~~~~~~s~~~~dli~~~L~~dP  312 (346)
T 4fih_A          261 IEMVDGEPPYFNEPPLKAMKMIRDNLPPR-L---------------------------KNLHKVSPSLKGFLDRLLVRDP  312 (346)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHSSCCC-C---------------------------SCGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHHCCCCCCCcCHHHHHHHHHcCCCCC-C---------------------------CccccCCHHHHHHHHHHcCCCh
Confidence            99999999999999888877775432110 0                           0123568999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ++|+|++|+|+||||+..
T Consensus       313 ~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          313 AQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             TTSCCHHHHTTCGGGGGC
T ss_pred             hHCcCHHHHhcCHhhcCC
Confidence            999999999999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.6e-37  Score=264.39  Aligned_cols=135  Identities=25%  Similarity=0.410  Sum_probs=103.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......    ..++.+||+.|+|||++.+...++.++||||+||++
T Consensus       134 iHRDiKP~NILl~-------~~~~vkl~DFGla~~~~~~~----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvil  202 (275)
T 3hyh_A          134 VHRDLKPENLLLD-------EHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL  202 (275)
T ss_dssp             CCCCCCTTTEEEC-------TTCCEEECCSSCC-------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHH
T ss_pred             ccccCChHHeEEC-------CCCCEEEeecCCCeecCCCC----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHH
Confidence            6999999999999       89999999999998764322    245679999999999987655457899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+....+..+....-.                               +...+|+++++||.+||+.||
T Consensus       203 y~lltg~~PF~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~li~~~L~~dP  251 (275)
T 3hyh_A          203 YVMLCRRLPFDDESIPVLFKNISNGVYT-------------------------------LPKFLSPGAAGLIKRMLIVNP  251 (275)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCC-------------------------------CCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHcCCCC-------------------------------CCCCCCHHHHHHHHHHccCCh
Confidence            9999999999998877766665432110                               113468999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      ++|+|++|+++||||+.
T Consensus       252 ~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          252 LNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             GGSCCHHHHHHCHHHHT
T ss_pred             hHCcCHHHHHcCccccc
Confidence            99999999999999964

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=3.9e-36  Score=268.55  Aligned_cols=166  Identities=45%  Similarity=0.821  Sum_probs=144.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.....      .+..+||+.|+|||++.+...++.++||||+||+
T Consensus       165 ivH~Dikp~NIll~-------~~~~~kL~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (371)
T 4exu_A          165 VVHRDLKPGNLAVN-------EDCELKILDFGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCI  231 (371)
T ss_dssp             CCCSCCCGGGEEEC-------TTCCEEECSTTCC--------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHH
T ss_pred             CcCCCcCHHHeEEC-------CCCCEEEEecCcccccccC------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHH
Confidence            36999999999999       8999999999999865432      3456899999999998765679999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+.+..+....|.+..+.+..+.......+....+......+...++..++++.+||.+||+.|
T Consensus       232 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  311 (371)
T 4exu_A          232 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD  311 (371)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSC
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCC
Confidence            99999999999999999999999999999999888877777777788888877777788888899999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++|+|+||||+.+
T Consensus       312 P~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          312 VDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             TTTSCCHHHHHTSGGGTTT
T ss_pred             hhhcCCHHHHhcCcccccC
Confidence            9999999999999999653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=9.9e-37  Score=273.32  Aligned_cols=139  Identities=24%  Similarity=0.433  Sum_probs=117.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .+|.+||+|||+|+.+.....   ..++.|||++|||||++.+ ..|+.++||||+||++
T Consensus       269 iHRDiKp~NILl~-------~~g~vKl~DFGla~~~~~~~~---~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvil  337 (423)
T 4fie_A          269 IHRDIKSDSILLT-------HDGRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMV  337 (423)
T ss_dssp             ECCCCSTTTEEEC-------TTCCEEECCCTTCEECCSSCC---CBCCCEECTTTCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             ecccCCHHHEEEc-------CCCCEEEecCccceECCCCCc---cccccccCcCcCCHHHHCC-CCCCcHHHHHHHHHHH
Confidence            5999999999999       899999999999998754322   2467899999999999864 6699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..|..... +.                           ......+|+++++||.+||+.||
T Consensus       338 yeml~G~~PF~~~~~~~~~~~i~~~~~-~~---------------------------~~~~~~~s~~~~dli~~~L~~dP  389 (423)
T 4fie_A          338 IEMVDGEPPYFNEPPLKAMKMIRDNLP-PR---------------------------LKNLHKVSPSLKGFLDRLLVRDP  389 (423)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHSCC-CC---------------------------CSCTTSSCHHHHHHHHHHSCSST
T ss_pred             HHHHHCCCCCCCcCHHHHHHHHHcCCC-CC---------------------------CcccccCCHHHHHHHHHHcCCCh
Confidence            999999999999998888777754211 00                           01123578999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|+|++|+|+||||+..
T Consensus       390 ~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          390 AQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             TTSCCHHHHTTCGGGGGC
T ss_pred             hHCcCHHHHhcCHHhcCC
Confidence            999999999999999764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=6.5e-37  Score=264.17  Aligned_cols=136  Identities=26%  Similarity=0.414  Sum_probs=113.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+......   ...++.+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       148 iHRDlKp~NILl~-------~~g~vKl~DFGla~~~~~~~---~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvil  216 (304)
T 3ubd_A          148 IYRDLKPENILLD-------EEGHIKLTDFGLSKESIDHE---KKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLM  216 (304)
T ss_dssp             CCSSCCGGGEEEC-------TTSCEEEESSEEEEC--------CCCCSCCCCGGGCCHHHHHT-SCCCTHHHHHHHHHHH
T ss_pred             cCCCCCHHHeEEc-------CCCCEEecccccceeccCCC---ccccccccCcccCCHHHhcc-CCCCCCCcccchHHHH
Confidence            6999999999999       89999999999998654322   12456799999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..|....-.                               +...+|+++.+||.+||+.||
T Consensus       217 yemltG~~PF~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~li~~~L~~dP  265 (304)
T 3ubd_A          217 FEMLTGTLPFQGKDRKETMTMILKAKLG-------------------------------MPQFLSPEAQSLLRMLFKRNP  265 (304)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------------------CCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHhCCCCCCCcCHHHHHHHHHcCCCC-------------------------------CCCcCCHHHHHHHHHHcccCH
Confidence            9999999999999988887777642110                               113468999999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~  183 (308)
                      ++|+|     ++|+++||||+.+
T Consensus       266 ~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          266 ANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             GGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHCCCCCcCCHHHHHcCccccCC
Confidence            99998     4899999999763

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.3e-35  Score=263.32  Aligned_cols=165  Identities=45%  Similarity=0.816  Sum_probs=142.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.....      .+..+||+.|+|||++.+...++.++||||+||+
T Consensus       147 ivH~dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~i  213 (353)
T 3coi_A          147 VVHRDLKPGNLAVN-------EDCELKILDFGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCI  213 (353)
T ss_dssp             CCCSSCCGGGEEEC-------TTCCEEECSTTCTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHH
T ss_pred             cccCCCCHHHEeEC-------CCCcEEEeecccccCCCCC------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHH
Confidence            36999999999999       8899999999999865432      2456899999999998765678999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+++..+....|.+..+.+..+.......+....+......+....+.+++++.+||.+||..|
T Consensus       214 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  293 (353)
T 3coi_A          214 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD  293 (353)
T ss_dssp             HHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSC
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999998888877777777777777777777777777889999999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||++++++||||+.
T Consensus       294 p~~Rpt~~e~l~hp~f~~  311 (353)
T 3coi_A          294 VDKRLTAAQALTHPFFEP  311 (353)
T ss_dssp             TTTSCCHHHHHTSGGGTT
T ss_pred             cccCCCHHHHhcCcchhh
Confidence            999999999999999965

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.2e-36  Score=261.26  Aligned_cols=136  Identities=19%  Similarity=0.343  Sum_probs=107.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+.      .++.+||+|||+|+.....     ..++.+||+.|||||++.+  .|+.++||||+||++
T Consensus       153 iHRDlKp~NILl~~------~~g~vKl~DFGla~~~~~~-----~~~~~~GTp~YmAPE~~~~--~y~~~~DiwSlGvil  219 (290)
T 3fpq_A          153 IHRDLKCDNIFITG------PTGSVKIGDLGLATLKRAS-----FAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCM  219 (290)
T ss_dssp             CCCCCCGGGEEESS------TTSCEEECCTTGGGGCCTT-----SBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHH
T ss_pred             EecccChhheeEEC------CCCCEEEEeCcCCEeCCCC-----ccCCcccCccccCHHHcCC--CCCcHHHHHHHHHHH
Confidence            79999999999971      4789999999999864322     2456799999999998753  499999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+....+...+.. +..+.                           ......++++.+||.+||+.||
T Consensus       220 yelltg~~Pf~~~~~~~~~~~~i~~-~~~~~---------------------------~~~~~~~~~~~~li~~~L~~dP  271 (290)
T 3fpq_A          220 LEMATSEYPYSECQNAAQIYRRVTS-GVKPA---------------------------SFDKVAIPEVKEIIEGCIRQNK  271 (290)
T ss_dssp             HHHHHSSCTTTTCSSHHHHHHHHTT-TCCCG---------------------------GGGGCCCHHHHHHHHHHSCSSG
T ss_pred             HHHHHCCCCCCCCCcHHHHHHHHHc-CCCCC---------------------------CCCccCCHHHHHHHHHHccCCh
Confidence            9999999999876655444333211 11111                           1112467899999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      ++|||++|+|+||||++
T Consensus       272 ~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          272 DERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GGSCCHHHHHTSGGGC-
T ss_pred             hHCcCHHHHhcCccccC
Confidence            99999999999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.4e-37  Score=270.30  Aligned_cols=136  Identities=24%  Similarity=0.427  Sum_probs=115.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .+|.+||+|||+|+......   ...++.+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       147 iHRDlKp~NILl~-------~~g~vKl~DFGla~~~~~~~---~~~~~~~GT~~YmAPE~l~~-~~y~~~~DiwSlGvil  215 (350)
T 4b9d_A          147 LHRDIKSQNIFLT-------KDGTVQLGDFGIARVLNSTV---ELARACIGTPYYLSPEICEN-KPYNNKSDIWALGCVL  215 (350)
T ss_dssp             EETTCCGGGEEEC-------TTCCEEECSTTEESCCCHHH---HHHHHHHSCCTTCCHHHHTT-CCCCHHHHHHHHHHHH
T ss_pred             eeccCCHHHEEEC-------CCCCEEEcccccceeecCCc---ccccccCCCccccCHHHHCC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       89999999999998764321   11355789999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..|......+                              ....+|+++.+||.+||+.||
T Consensus       216 yemltG~~PF~~~~~~~~~~~i~~~~~~~------------------------------~~~~~s~~~~~li~~~L~~dP  265 (350)
T 4b9d_A          216 YELCTLKHAFEAGSMKNLVLKIISGSFPP------------------------------VSLHYSYDLRSLVSQLFKRNP  265 (350)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHTCCCC------------------------------CCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHHCCCCCCCcCHHHHHHHHHcCCCCC------------------------------CCccCCHHHHHHHHHHccCCh
Confidence            99999999999999888877776421111                              123578999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      ++|||++|+|+||||+.
T Consensus       266 ~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          266 RDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             GGSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHhcCHHhhc
Confidence            99999999999999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.1e-35  Score=259.55  Aligned_cols=145  Identities=21%  Similarity=0.321  Sum_probs=110.9

Q ss_pred             CCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCC--CccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      .||||||+||||+       .+| ++||+|||+|+..........  .....+||+.|||||++.+ ..|+.++||||+|
T Consensus       172 iHRDlKp~NILl~-------~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlG  243 (336)
T 4g3f_A          172 LHGDVKADNVLLS-------SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSC  243 (336)
T ss_dssp             ECSCCCGGGEEEC-------TTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTT-CCCCTHHHHHHHH
T ss_pred             eecccCHHHEEEe-------CCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCC-CCCCcHHHHHHHH
Confidence            6999999999998       776 699999999997754321111  1234689999999999875 5699999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++|||++|++||.+.+..+.+..|...  .                          .++..+.+.+++++.+||.+||+
T Consensus       244 vilyemltG~~Pf~~~~~~~~~~~i~~~--~--------------------------~~~~~~~~~~s~~~~~li~~~L~  295 (336)
T 4g3f_A          244 CMMLHMLNGCHPWTQYFRGPLCLKIASE--P--------------------------PPIREIPPSCAPLTAQAIQEGLR  295 (336)
T ss_dssp             HHHHHHHHSSCSSTTTCCSCCHHHHHHS--C--------------------------CGGGGSCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHCcCCCCCCCHHHHHHHHHcC--C--------------------------CCchhcCccCCHHHHHHHHHHcc
Confidence            9999999999999887765555555431  1                          11223445789999999999999


Q ss_pred             cCCCCCCCHHHH-------------hcCCccccccCC
Q psy7274         163 FNPHKRIGVEDA-------------LAHPYLEQYYDP  186 (308)
Q Consensus       163 ~dP~~R~t~~ei-------------l~hp~f~~~~~~  186 (308)
                      .||.+|||+.|+             |+|||+..+..|
T Consensus       296 ~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P  332 (336)
T 4g3f_A          296 KEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP  332 (336)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred             CCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence            999999999997             568888665443

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2e-34  Score=255.53  Aligned_cols=171  Identities=47%  Similarity=0.958  Sum_probs=141.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-------CCccCcccccccchhhHhhCCCCCCchhhH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-------GFLTEYVATRWYRAPEIMLNSKGYTKSIDI   78 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~Di   78 (308)
                      .||||||+|||++       .++.+||+|||+|+.........       ......+||..|+|||++.+...++.++||
T Consensus       134 vH~Dlkp~Nil~~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  206 (353)
T 2b9h_A          134 IHRDLKPSNLLIN-------SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV  206 (353)
T ss_dssp             ECSCCCGGGEEEC-------TTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred             ecCCCCHHHeEEc-------CCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhH
Confidence            6999999999999       88999999999998765322111       113446899999999998766679999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChh-hHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          79 WSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPE-DLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        79 WSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      ||+||++++|++|++||.+.+..+++..+....|.+... .+..........+....+..+..++...++.+++++.+||
T Consensus       207 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  286 (353)
T 2b9h_A          207 WSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL  286 (353)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHH
Confidence            999999999999999999999999999999999987743 3334444556667777777777777778889999999999


Q ss_pred             HHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         158 GKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .+||..||.+|||++++++||||+..
T Consensus       287 ~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          287 QRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHhcCcCcccCCCHHHHhcCcccccc
Confidence            99999999999999999999999764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.3e-35  Score=275.23  Aligned_cols=138  Identities=22%  Similarity=0.320  Sum_probs=109.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .+|++||+|||+|+......     ..+.|||+.|+|||++.++..|+.++||||+||++
T Consensus       314 iHRDLKPeNILld-------~~G~vKL~DFGlA~~~~~~~-----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvil  381 (689)
T 3v5w_A          314 VYRDLKPANILLD-------EHGHVRISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML  381 (689)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECSSCC-----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHH
T ss_pred             cccCCchHHeEEe-------CCCCEEecccceeeecCCCC-----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       99999999999999875432     35579999999999987656799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.......+...+                            ..+...+|+++++||.+||+.||
T Consensus       382 YEmLtG~~PF~~~~~~~~~~i~~~i~~~~----------------------------~~~p~~~S~~a~dLI~~lL~~dP  433 (689)
T 3v5w_A          382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMA----------------------------VELPDSFSPELRSLLEGLLQRDV  433 (689)
T ss_dssp             HHHHHSSCTTCGGGCCCHHHHHHHHHHCC----------------------------CCCCTTSCHHHHHHHHHHTCSCG
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHhhcCCC----------------------------CCCCccCCHHHHHHHHHHccCCH
Confidence            99999999997754222211111111100                            01123578999999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~  183 (308)
                      .+|++     ++||++||||+.+
T Consensus       434 ~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          434 NRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             GGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             hHCCCCCCCCHHHHhcCccccCC
Confidence            99998     7999999999873

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.4e-34  Score=258.52  Aligned_cols=166  Identities=40%  Similarity=0.752  Sum_probs=123.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......    ..+..+||+.|+|||++.+ ..++.++||||+||+
T Consensus       148 ivH~Dlkp~NIl~~-------~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  215 (371)
T 2xrw_A          148 IIHRDLKPSNIVVK-------SDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI  215 (371)
T ss_dssp             CCCSCCCGGGEEEC-------TTSCEEECCCCC--------------------CTTCCHHHHTT-CCCCTTHHHHHHHHH
T ss_pred             eecccCCHHHEEEc-------CCCCEEEEEeeccccccccc----ccCCceecCCccCHHHhcC-CCCCchHhHHHHHHH
Confidence            37999999999999       88999999999998764321    1345689999999999875 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCC------------Chh
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA------------DPN  152 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------s~~  152 (308)
                      +++|++|+.||.+.+..+++..+...+|.|.++.+..+. .....+....+......+...++..            +.+
T Consensus       216 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (371)
T 2xrw_A          216 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ  294 (371)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC-HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh-hHHHHHHhhCccccccchhhhcccccCcccccccccccHH
Confidence            999999999999999999999999999999888776542 3344444444444433333332221            567


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       153 ~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      +++||.+||+.||.+|||++|+|+||||+.+
T Consensus       295 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          295 ARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            9999999999999999999999999999653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=8.7e-33  Score=245.90  Aligned_cols=168  Identities=43%  Similarity=0.828  Sum_probs=134.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......    ....+||++|+|||++.+...++.++||||+||+
T Consensus       155 ivH~Dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  223 (362)
T 3pg1_A          155 VVHRDLHPGNILLA-------DNNDITICDFNLAREDTADAN----KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV  223 (362)
T ss_dssp             CCCCCCCGGGEEEC-------TTCCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred             CEecCCChHHEEEc-------CCCCEEEEecCcccccccccc----cceecccceecCcHHhcCCCCCCcHhHHHhHHHH
Confidence            36999999999998       889999999999986543321    3456899999999998765679999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcC-CCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSL-PFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++|+.||.+.+..+.+..+....+.+....+..........+.... ...+...+....+..++.+.+||.+||+.
T Consensus       224 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  303 (362)
T 3pg1_A          224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF  303 (362)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence            99999999999999999999999999999998887766666665555433 34455566677788899999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+|||++|+++||||+.+
T Consensus       304 dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          304 NPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             SGGGSCCHHHHHTSGGGTTT
T ss_pred             ChhhCCCHHHHHcCchhhhc
Confidence            99999999999999999764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.3e-33  Score=244.05  Aligned_cols=138  Identities=20%  Similarity=0.347  Sum_probs=97.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC---------CCccCcccccccchhhHhhCCCCCCchh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSI   76 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~---------~~~~~~~gt~~y~aPE~l~~~~~~~~~~   76 (308)
                      .||||||+|||++       .++.+||+|||+|+.........         ...++.+||+.|||||++.+ ..|+.++
T Consensus       140 iHRDlKp~NILl~-------~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~  211 (299)
T 4g31_A          140 MHRDLKPSNIFFT-------MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKV  211 (299)
T ss_dssp             CCCCCCGGGEEEC-------TTCCEEECCCCCC--------------------------CCCTTSCHHHHTT-CCCCTHH
T ss_pred             ccccCcHHHeEEC-------CCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC-CCCCCHH
Confidence            6999999999999       89999999999999765432111         12356789999999999865 5699999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHH
Q psy7274          77 DIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL  156 (308)
Q Consensus        77 DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  156 (308)
                      ||||+||++|||++   ||.+  ..+....+..+.....+..+.                           ..++.+.+|
T Consensus       212 DiwSlGvilyell~---Pf~~--~~~~~~~~~~~~~~~~p~~~~---------------------------~~~~~~~~l  259 (299)
T 4g31_A          212 DIFSLGLILFELLY---PFST--QMERVRTLTDVRNLKFPPLFT---------------------------QKYPCEYVM  259 (299)
T ss_dssp             HHHHHHHHHHHHHS---CCSS--HHHHHHHHHHHHTTCCCHHHH---------------------------HHCHHHHHH
T ss_pred             HHHHHHHHHHHHcc---CCCC--ccHHHHHHHHHhcCCCCCCCc---------------------------ccCHHHHHH
Confidence            99999999999996   6654  333333333333222222211                           235778999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         157 LGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |.+||+.||.+|||++|+|+||||+++
T Consensus       260 i~~~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          260 VQDMLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             HHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.3e-33  Score=264.54  Aligned_cols=145  Identities=23%  Similarity=0.357  Sum_probs=120.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.     +..+.+||+|||+|+.+....    .....+||++|+|||++.+ ..|+.++||||+||++
T Consensus       277 iHRDlKp~Nill~~-----~~~~~vKl~DFG~a~~~~~~~----~~~~~~GT~~y~APEv~~~-~~y~~~~DiWSlGvil  346 (573)
T 3uto_A          277 VHLDLKPENIMFTT-----KRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLS  346 (573)
T ss_dssp             ECCCCCGGGEEESS-----SSCCCEEECCCSSCEECCTTS----EEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHH
T ss_pred             eeccCChhhccccC-----CCCCCEEEeeccceeEccCCC----ceeeeEECccccCHHHhCC-CCCCcHHHHHHHHHHH
Confidence            59999999999971     134899999999999875432    2456799999999999875 6699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..|......++..                           .++.+|+++++||.+||+.||
T Consensus       347 yeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~s~~~~dli~~~L~~dp  399 (573)
T 3uto_A          347 YILLSGLSPFGGENDDETLRNVKSCDWNMDDS---------------------------AFSGISEDGKDFIRKLLLADP  399 (573)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSG---------------------------GGTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcc---------------------------cccCCCHHHHHHHHHHccCCh
Confidence            99999999999999988888776543322221                           224678999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      .+|+|++|+|+||||+....+.
T Consensus       400 ~~R~t~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          400 NTRMTIHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             GGSCCHHHHHHSTTTSCCCCTT
T ss_pred             hHCcCHHHHhcCcCcCCCCCCC
Confidence            9999999999999998765543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=7.7e-33  Score=241.37  Aligned_cols=167  Identities=38%  Similarity=0.712  Sum_probs=137.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   ..+..+||+.|+|||++.+...++.++||||+||++
T Consensus       141 vH~Dikp~NIl~~-------~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  210 (311)
T 3niz_A          141 LHRDLKPQNLLIN-------SDGALKLADFGLARAFGIPVR---SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIF  210 (311)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEETTSCCC------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred             ccCCCchHhEEEC-------CCCCEEEccCcCceecCCCcc---cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHH
Confidence            6999999999999       889999999999987653321   134568999999999987666789999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+...++.+.+..+......... ...........++....+..++++.+||.+||+.||
T Consensus       211 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  289 (311)
T 3niz_A          211 AEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW-KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDP  289 (311)
T ss_dssp             HHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH-HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCT
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh-hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCCh
Confidence            9999999999999999999999999999988777654332111 111223344556667778899999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+|+||||++.
T Consensus       290 ~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          290 NKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             TTSCCHHHHHTSGGGTTS
T ss_pred             hHCCCHHHHhcCcccccC
Confidence            999999999999999874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.98  E-value=1.3e-32  Score=247.65  Aligned_cols=168  Identities=31%  Similarity=0.688  Sum_probs=136.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.      .++.+||+|||+|+.......    ...++||++|+|||++.+...|+.++||||+||++
T Consensus       163 vHrDlkp~Nill~~------~~~~~kL~DFG~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il  232 (394)
T 4e7w_A          163 CHRDIKPQNLLLDP------PSGVLKLIDFGSAKILIAGEP----NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVM  232 (394)
T ss_dssp             ECSCCSGGGEEEET------TTTEEEECCCTTCEECCTTCC----CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEcC------CCCcEEEeeCCCcccccCCCC----CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHH
Confidence            69999999999972      578999999999987654322    34568999999999997766799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccC-CCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY-PNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++|++||.+.+..+++..+...+|.|..+.+......   ......+.....++...+ +.+++++.+||.+||+.|
T Consensus       233 ~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (394)
T 4e7w_A          233 AELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPN---YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT  309 (394)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGG---GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh---hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999998876543211   011122333444444433 358999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~  186 (308)
                      |.+|||+.|+++||||+.+...
T Consensus       310 P~~R~t~~e~l~hp~f~~~~~~  331 (394)
T 4e7w_A          310 PSARLTAIEALCHPFFDELRTG  331 (394)
T ss_dssp             GGGSCCHHHHHTSGGGSTTTSS
T ss_pred             hhhCCCHHHHhcChhhhhhccc
Confidence            9999999999999999876443

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.98  E-value=1.8e-32  Score=236.29  Aligned_cols=165  Identities=37%  Similarity=0.711  Sum_probs=131.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   ..+..+||..|+|||++.+...++.++||||+||++
T Consensus       122 ~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  191 (288)
T 1ob3_A          122 LHRDLKPQNLLIN-------REGELKIADFGLARAFGIPVR---KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF  191 (288)
T ss_dssp             CCSCCCGGGEEEC-------TTSCEEECCTTHHHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEeECccccccCcccc---ccccccccccccCchheeCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999987653221   134568899999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+...++.+....+.....  ...+..........++......+++++.+||.+||+.||
T Consensus       192 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  269 (288)
T 1ob3_A          192 AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE--LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP  269 (288)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG--STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhc--ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCc
Confidence            999999999999999999999999999887766554321  111222233334455666777899999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++|+++||||++
T Consensus       270 ~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          270 NQRITAKQALEHAYFKE  286 (288)
T ss_dssp             TTSCCHHHHHTSGGGGC
T ss_pred             ccCCCHHHHhcCcchhh
Confidence            99999999999999975

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.98  E-value=1.3e-32  Score=237.70  Aligned_cols=138  Identities=19%  Similarity=0.246  Sum_probs=102.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       +++.+||+|||+|+....... ....+..+||+.|+|||++.+.  ..|+.++||||+||
T Consensus       154 iHRDlKp~NILl~-------~~~~~Ki~DFGla~~~~~~~~-~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gv  225 (307)
T 3omv_A          154 IHRDMKSNNIFLH-------EGLTVKIGDFGLATVKSRWSG-SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGI  225 (307)
T ss_dssp             BCSCCCSSSEEEE-------TTEEEEECCCSSCBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHH
T ss_pred             cCCccCHHHEEEC-------CCCcEEEeeccCceecccCCc-ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHH
Confidence            6999999999999       899999999999987643221 1224567999999999998642  34899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|||++|+.||.+.+....+..++.....+                         .......+++++++.+|+.+||+.
T Consensus       226 vl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~-------------------------p~~~~~~~~~~~~l~~li~~cl~~  280 (307)
T 3omv_A          226 VLYELMTGELPYSHINNRDQIIFMVGRGYAS-------------------------PDLSKLYKNCPKAMKRLVADCVKK  280 (307)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHTTCCC-------------------------CCSTTSCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcCCCC-------------------------CCcccccccchHHHHHHHHHHcCC
Confidence            9999999999999877666555444321111                         011223346789999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||++|||+.|+++
T Consensus       281 dP~~RPs~~ei~~  293 (307)
T 3omv_A          281 VKEERPLFPQILS  293 (307)
T ss_dssp             SSTTSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999998754

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.98  E-value=3.8e-32  Score=238.34  Aligned_cols=169  Identities=34%  Similarity=0.619  Sum_probs=132.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   .....+||.+|+|||++.+...++.++||||+||++
T Consensus       122 vH~Dikp~NIl~~-------~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  191 (324)
T 3mtl_A          122 LHRDLKPQNLLIN-------ERGELKLADFGLARAKSIPTK---TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF  191 (324)
T ss_dssp             EESSCCGGGEEEC-------TTCCEEECSSSEEECC---------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             cCCCcCHHHEEEC-------CCCCEEEccCcccccccCCcc---ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999986543321   134568899999999987766789999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+++..+...+|.|....+........... ...+...........+.+++++.+||.+||+.||
T Consensus       192 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  270 (324)
T 3mtl_A          192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT-YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEG  270 (324)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH-TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc-cccccccchhhhhhcCCCCHHHHHHHHHHcCcCc
Confidence            999999999999999999999999999999888776554332221 1222333333445566789999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccC
Q psy7274         166 HKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~  185 (308)
                      .+|||++|+|+||||.....
T Consensus       271 ~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          271 RNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             GGSCCHHHHTTSGGGGGGCS
T ss_pred             ccCCCHHHHhcChhhhhccc
Confidence            99999999999999987643

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=7.8e-32  Score=244.45  Aligned_cols=167  Identities=34%  Similarity=0.675  Sum_probs=133.2

Q ss_pred             CCCCCCCCCcccCccccccCCC-CCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDP-ADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~-~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .+ +.+||+|||+|+.......    ...++||++|+|||++.+...|+.++||||+||+
T Consensus       178 vHrDlkp~NILl~-------~~~~~~kl~DFG~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i  246 (420)
T 1j1b_A          178 CHRDIKPQNLLLD-------PDTAVLKLCDFGSAKQLVRGEP----NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV  246 (420)
T ss_dssp             ECSCCSGGGEEEE-------TTTTEEEECCCTTCEECCTTCC----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             cccCCChhhEEEe-------CCCCeEEeccchhhhhcccCCC----ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHH
Confidence            6999999999998       44 5689999999997654322    3456899999999998766579999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcccc-CCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL-YPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~ll~~~L~~  163 (308)
                      +|||++|++||.+.+..+++..++..+|.|..+.+..... ....  ...+.....+|... .+..++++++||.+||++
T Consensus       247 l~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~-~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~  323 (420)
T 1j1b_A          247 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP-NYTE--FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY  323 (420)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCS-CCCC--CCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh-hhhh--hccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence            9999999999999999999999999999998877654311 0000  01222233334333 346789999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccCC
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      ||.+|+|++|+++||||+.+..+
T Consensus       324 dP~~R~t~~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          324 TPTARLTPLEACAHSFFDELRDP  346 (420)
T ss_dssp             SGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             ChhHCCCHHHHhCCHhhcccccc
Confidence            99999999999999999876544

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=4.9e-32  Score=235.82  Aligned_cols=162  Identities=38%  Similarity=0.665  Sum_probs=132.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......    .+..+||+.|+|||++.+ ..++.++||||+||++
T Consensus       142 vH~Dlkp~Nil~~-------~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  209 (308)
T 3g33_A          142 VHRDLKPENILVT-------SGGTVKLADFGLARIYSYQMA----LTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIF  209 (308)
T ss_dssp             CCSCCCTTTEEEC-------TTSCEEECSCSCTTTSTTCCC----SGGGGCCCSSCCHHHHHT-SCCCSTHHHHHHHHHH
T ss_pred             ccCCCCHHHEEEc-------CCCCEEEeeCccccccCCCcc----cCCccccccccCchHHcC-CCCCchHHHHHHHHHH
Confidence            7999999999999       889999999999987653321    355689999999999875 4599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+..+++..+....+.++...+.......    ....+.....+.....+.+++++.+||.+||+.||
T Consensus       210 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  285 (308)
T 3g33_A          210 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP----RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNP  285 (308)
T ss_dssp             HHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSC----GGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcc----ccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999988876654322110    01122334445556677889999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+|+||||+..
T Consensus       286 ~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          286 HKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             TTSCCHHHHHTSTTC---
T ss_pred             ccCCCHHHHhcCccccCC
Confidence            999999999999999763

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=4e-32  Score=237.48  Aligned_cols=172  Identities=34%  Similarity=0.635  Sum_probs=131.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   .....+||..|+|||++.+...++.++||||+||++
T Consensus       130 vH~Dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  199 (317)
T 2pmi_A          130 LHRDLKPQNLLIN-------KRGQLKLGDFGLARAFGIPVN---TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCIL  199 (317)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCSSCEETTSCCC---CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             eeCCCChHHeEEc-------CCCCEEECcCccceecCCCcc---cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHH
Confidence            6999999999999       889999999999987653321   134568999999999987656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcc-----ccCCCCChhHHHHHHHh
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE-----ILYPNADPNALDLLGKM  160 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~s~~~~~ll~~~  160 (308)
                      ++|++|+.||.+.+..+++..+....|.+....+......  ..+...........+.     ......+.++.+||.+|
T Consensus       200 ~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  277 (317)
T 2pmi_A          200 AEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL--PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGL  277 (317)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC--TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh--hhcccccccccchhHHHhhcccccccCCHHHHHHHHHH
Confidence            9999999999999999999999999998887666543211  0111111111111111     11235788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccccCCCCC
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQYYDPADE  189 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~~~~~~~  189 (308)
                      |+.||.+|||++|+|+||||+.+..++.+
T Consensus       278 L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~  306 (317)
T 2pmi_A          278 LQLNPDMRLSAKQALHHPWFAEYYHHASM  306 (317)
T ss_dssp             SCSSGGGSCCHHHHTTSGGGGGGCC----
T ss_pred             CCCCcccCCCHHHHhCChhhhcccchhhc
Confidence            99999999999999999999887655433

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=6.7e-32  Score=233.20  Aligned_cols=167  Identities=32%  Similarity=0.626  Sum_probs=130.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   ..+..+||..|+|||++.+...++.++||||+||++
T Consensus       123 vH~dikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  192 (292)
T 3o0g_A          123 LHRDLKPQNLLIN-------RNGELKLANFGLARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF  192 (292)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECCSCCS---CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEeecccceecCCccc---cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHH
Confidence            6999999999999       899999999999987653321   235568999999999987666689999999999999


Q ss_pred             HHHhhCC-CCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~-~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|. ++|.+.+..+++..+....+.+....+.......  .+................+..++++.+||.+||+.|
T Consensus       193 ~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  270 (292)
T 3o0g_A          193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP--DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCN  270 (292)
T ss_dssp             HHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST--TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc--cccccccccCCcchhhcccccChHHHHHHHHHhccC
Confidence            9999776 5578888999999999999999887765432210  000000111122233445678999999999999999


Q ss_pred             CCCCCCHHHHhcCCcccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~  184 (308)
                      |.+|||++|+|+||||+++.
T Consensus       271 P~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          271 PVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             GGGSCCHHHHHTSGGGTTC-
T ss_pred             hhhCCCHHHHhcCcccccCC
Confidence            99999999999999998753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=6.9e-32  Score=243.76  Aligned_cols=180  Identities=32%  Similarity=0.539  Sum_probs=123.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||+..   ..+.++.+||+|||+|+...............+||++|+|||++.+...++.++||||+||+
T Consensus       149 ivH~Dlkp~NIll~~---~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i  225 (405)
T 3rgf_A          149 VLHRDLKPANILVMG---EGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI  225 (405)
T ss_dssp             CCCCCCCGGGEEECC---SSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHH
T ss_pred             EeCCCcCHHHeEEec---CCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHH
Confidence            369999999999930   00167899999999998765432222234567899999999999765669999999999999


Q ss_pred             HHHHhhCCCCCCCCCH---------HHHHHHHHHhhCCCChhhHhhhhhHH-HHHHhhcCCCC--CCCC----ccccCCC
Q psy7274          85 LAEMISNRPIFPGKHY---------LDQLNHILGILGSPTPEDLSCIINEK-ARSYLQSLPFK--PKVP----WEILYPN  148 (308)
Q Consensus        85 l~ell~g~~pf~~~~~---------~~~l~~i~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~--~~~~----~~~~~~~  148 (308)
                      +|+|++|++||.+...         .+++..|...+|.|....|..+.... ...........  ....    .......
T Consensus       226 l~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (405)
T 3rgf_A          226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK  305 (405)
T ss_dssp             HHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCC
T ss_pred             HHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCC
Confidence            9999999999987654         58899999999999887776543211 01111111000  0000    0111223


Q ss_pred             CChhHHHHHHHhcccCCCCCCCHHHHhcCCccccccCCC
Q psy7274         149 ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       149 ~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      .++.+.+||.+||+.||.+|||++|+|+||||.....+.
T Consensus       306 ~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~~  344 (405)
T 3rgf_A          306 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPT  344 (405)
T ss_dssp             TTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCCC
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCCc
Confidence            478899999999999999999999999999998765443

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=3e-31  Score=241.16  Aligned_cols=162  Identities=32%  Similarity=0.605  Sum_probs=126.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCC--ceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPAD--EPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~--~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .++.  +||+|||+|+.....      ....+||+.|+|||++.+ ..++.++||||+||
T Consensus       222 vHrDlKp~NILl~-------~~~~~~vkL~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~  287 (429)
T 3kvw_A          222 IHCDLKPENILLK-------QQGRSGIKVIDFGSSCYEHQR------VYTYIQSRFYRAPEVILG-ARYGMPIDMWSLGC  287 (429)
T ss_dssp             ECSCCSGGGEEES-------STTSCCEEECCCTTCEETTCC------CCSSCSCGGGCCHHHHHT-BCCCTHHHHHHHHH
T ss_pred             ecCCCCHHHeEEc-------cCCCcceEEeecccceecCCc------ccccCCCCCccChHHHhC-CCCCchHHHHhHHH
Confidence            6999999999998       6666  999999999865432      345689999999999876 45999999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCC--------------------------
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFK--------------------------  137 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------  137 (308)
                      ++|||++|++||.+.+..+++..+...+|.|+...+.....  ...+.......                          
T Consensus       288 il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (429)
T 3kvw_A          288 ILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKR--AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLR  365 (429)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTT--HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEE
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhh--hhhccCCCCCcccccccccccccccccccccchhhcc
Confidence            99999999999999999999999999999998876654322  22222211100                          


Q ss_pred             ---CCCCccc-cCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         138 ---PKVPWEI-LYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       138 ---~~~~~~~-~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                         ....|.. +....++.+.+||.+||++||.+|||++|+|+||||+..
T Consensus       366 ~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          366 GPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             CSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             CCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence               0011111 122347889999999999999999999999999999764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.5e-31  Score=235.20  Aligned_cols=168  Identities=33%  Similarity=0.603  Sum_probs=135.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......   ..+..+||+.|+|||++.+...++.++||||+||+
T Consensus       133 ivH~Dlkp~Nil~~-------~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  202 (346)
T 1ua2_A          133 ILHRDLKPNNLLLD-------ENGVLKLADFGLAKSFGSPNR---AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCI  202 (346)
T ss_dssp             CCCCCCCGGGEEEC-------TTCCEEECCCGGGSTTTSCCC---CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHH
T ss_pred             EECCCCCHHHEEEc-------CCCCEEEEecccceeccCCcc---cCCcccccccccCchHhhCCCCCCchhhhHhHHHH
Confidence            37999999999999       889999999999987653321   13556899999999998765668999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|.++|.+.+..+++..+....+.+....+.......  .+ ......+..++...+..++.++.+||.+||..|
T Consensus       203 l~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  279 (346)
T 1ua2_A          203 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP--DY-VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFN  279 (346)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST--TC-CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSS
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc--cc-ccccccCCCChHHhhccCCHHHHHHHHHHhccC
Confidence            999999999999999999999999999988877665432100  00 011122334445566778999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~  185 (308)
                      |.+|||++|+|+||||+....
T Consensus       280 P~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          280 PCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             TTTSCCHHHHHTSGGGTSSSC
T ss_pred             hhhCCCHHHHhcChhhhcCCC
Confidence            999999999999999987543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=1.3e-31  Score=238.06  Aligned_cols=171  Identities=35%  Similarity=0.692  Sum_probs=134.5

Q ss_pred             CCCCCCCCCCcccCccccccCC-CCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYD-PADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~-~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++       . ++.+||+|||+|+.......    ....+||+.|+|||++.+...++.++||||+||
T Consensus       152 ivH~Dlkp~NIll~-------~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~  220 (360)
T 3e3p_A          152 VCHRDIKPHNVLVN-------EADGTLKLCDFGSAKKLSPSEP----NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGC  220 (360)
T ss_dssp             CBCSCCCGGGEEEE-------TTTTEEEECCCTTCBCCCTTSC----CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred             eecCcCCHHHEEEe-------CCCCcEEEeeCCCceecCCCCC----cccccCCcceeCHHHHcCCCCCCcHHHHHHHHH
Confidence            36999999999998       5 78999999999987654322    345688999999999876666899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCC----CChhHHHHHHH
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN----ADPNALDLLGK  159 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~s~~~~~ll~~  159 (308)
                      ++++|++|+.||.+.+....+..+...++.++.+.+.........   .........++...++.    .++++.+||.+
T Consensus       221 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  297 (360)
T 3e3p_A          221 IFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTD---VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSA  297 (360)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCC---GGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHH
T ss_pred             HHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhh---ccccccccCCcccccchhhccccHHHHHHHHH
Confidence            999999999999999999999999999999988776543211000   00111222333333333    56889999999


Q ss_pred             hcccCCCCCCCHHHHhcCCccccccCCCCC
Q psy7274         160 MLTFNPHKRIGVEDALAHPYLEQYYDPADE  189 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~hp~f~~~~~~~~~  189 (308)
                      ||+.||.+|||+.|+|+||||+....+...
T Consensus       298 ~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~  327 (360)
T 3e3p_A          298 LLQYLPEERMKPYEALCHPYFDELHDPATK  327 (360)
T ss_dssp             HTCSSGGGSCCHHHHTTSGGGGGGGCTTCC
T ss_pred             HhccCccccCCHHHHhcCccccccCCcccc
Confidence            999999999999999999999987655443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=6.1e-32  Score=234.29  Aligned_cols=133  Identities=22%  Similarity=0.263  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       +++.+||+|||+|+....... ....+..+||+.|+|||++.++ .|+.++||||+||++
T Consensus       167 iHRDLK~~NILl~-------~~~~~Ki~DFGlar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~~-~~s~ksDVwSfGvvl  237 (308)
T 4gt4_A          167 VHKDLATRNVLVY-------DKLNVKISDLGLFREVYAADY-YKLLGNSLLPIRWMAPEAIMYG-KFSIDSDIWSYGVVL  237 (308)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCSCCBCGGGGGGC-BCSSSSSCBCGGGCCHHHHHHC-CCCHHHHHHHHHHHH
T ss_pred             CCCCccccceEEC-------CCCCEEECCcccceeccCCCc-eeEecccccCCcccCHHHHhCC-CCCccchhhhHHHHH
Confidence            6999999999999       889999999999987643321 1224567899999999998764 599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |..||.+.+..+.+..+......|.                              .+.+++++.+|+.+||+.|
T Consensus       238 ~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------------p~~~~~~~~~li~~C~~~d  287 (308)
T 4gt4_A          238 WEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC------------------------------PDDCPAWVYALMIECWNEF  287 (308)
T ss_dssp             HHHHTTTCCTTTTCCHHHHHHHHHTTCCCCC------------------------------CTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------cccchHHHHHHHHHHcCCC
Confidence            99998 8999999888777666543211111                              2356789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||+.||+++
T Consensus       288 P~~RPs~~ei~~~  300 (308)
T 4gt4_A          288 PSRRPRFKDIHSR  300 (308)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=234.35  Aligned_cols=133  Identities=17%  Similarity=0.248  Sum_probs=100.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++.+||+|||+|+........ ...+..+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       180 iHRDLKp~NILl~-------~~~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl  250 (329)
T 4aoj_A          180 VHRDLATRNCLVG-------QGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVVL  250 (329)
T ss_dssp             CCSCCCGGGEEEE-------TTTEEEECCCC-----------------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHH
T ss_pred             ecccccHhhEEEC-------CCCcEEEcccccceeccCCCcc-eecCcccccccccChhhhcC-CCCCccccccchHHHH
Confidence            6999999999999       8999999999999976443211 11345689999999999875 5699999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+.+..+.+..+......+                              ....+++++.+||.+||+.|
T Consensus       251 ~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~------------------------------~p~~~~~~~~~li~~cl~~d  300 (329)
T 4aoj_A          251 WEIFTYGKQPWYQLSNTEAIDCITQGRELE------------------------------RPRACPPEVYAIMRGCWQRE  300 (329)
T ss_dssp             HHHHTTSCCTTCSSCHHHHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CcccccHHHHHHHHHHcCcC
Confidence            99998 899999988877776665421111                              11356899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||++|++++
T Consensus       301 P~~RPs~~ei~~~  313 (329)
T 4aoj_A          301 PQQRHSIKDVHAR  313 (329)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999753

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=4.3e-31  Score=230.01  Aligned_cols=168  Identities=33%  Similarity=0.665  Sum_probs=126.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   .....+||..|+|||++.+...++.++||||+||++
T Consensus       124 vH~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  193 (311)
T 4agu_A          124 IHRDVKPENILIT-------KHSVIKLCDFGFARLLTGPSD---YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVF  193 (311)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECC---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHH
T ss_pred             cCCCCChhhEEEc-------CCCCEEEeeCCCchhccCccc---ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHH
Confidence            6999999999999       889999999999987653321   134568999999999998766789999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCC---CCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLP---FKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++|++|+.||.+.+..+.+..+...++...+.........   .+.....   .....+....++.++.++.+||.+||.
T Consensus       194 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  270 (311)
T 4agu_A          194 AELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN---QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLH  270 (311)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC---GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCC
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc---cccccCcCCCccccchhhhhcccccHHHHHHHHHHcc
Confidence            9999999999999999999999998888777554432211   1111111   111223344456789999999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccCC
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .||.+|||++|+++||||+.....
T Consensus       271 ~dP~~Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          271 MDPTERLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             SSTTTSCCHHHHHTSGGGTTCC--
T ss_pred             CChhhcCCHHHHhcChHHHhccCH
Confidence            999999999999999999876443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=5.6e-31  Score=231.18  Aligned_cols=137  Identities=23%  Similarity=0.335  Sum_probs=114.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......    .....+||++|+|||++.+....+.++||||+||+
T Consensus       135 ivHrDlkp~NIll~-------~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  203 (328)
T 3fe3_A          135 IVHRDLKAENLLLD-------ADMNIKIADFGFSNEFTVGG----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI  203 (328)
T ss_dssp             CCCSCCCGGGEEEC-------TTSCEEECSTTCCGGGSSSC----GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHH
T ss_pred             EeccCCCHHHEEEc-------CCCCEEEeeccCceecCCCC----ccccccCCcceeCcccccCCCcCCchhhhhhhHHH
Confidence            36999999999999       89999999999998765432    24667999999999999865545689999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+....+......                               ....+++++.+||.+||..|
T Consensus       204 l~ell~g~~pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~li~~~L~~d  252 (328)
T 3fe3_A          204 LYTLVSGSLPFDGQNLKELRERVLRGKYR-------------------------------IPFYMSTDCENLLKRFLVLN  252 (328)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------------------CCTTSCHHHHHHHHHHCCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------------------------CCCCCCHHHHHHHHHHCCCC
Confidence            99999999999998877766665432110                               11246899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++|+++||||+..
T Consensus       253 P~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          253 PIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             TTTSCCHHHHTTCTTTTTT
T ss_pred             hhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=7.1e-32  Score=237.94  Aligned_cols=134  Identities=22%  Similarity=0.311  Sum_probs=105.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       +++.+||+|||+|+......... ..+..+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       207 iHRDLK~~NILl~-------~~~~vKi~DFGlar~~~~~~~~~-~~~~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l  277 (353)
T 4ase_A          207 IHRDLAARNILLS-------EKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLL  277 (353)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCGGGSCTTTCTTSE-EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ecCccCccceeeC-------CCCCEEECcchhhhhcccCCCce-eeccccccccccCHHHHhc-CCCCCcccEeehHHHH
Confidence            6999999999999       88999999999999765433221 1345689999999999976 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+.+..+.+..++..-..+                             .....+++++.+||.+||+.|
T Consensus       278 ~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~-----------------------------~~p~~~~~~~~~li~~c~~~d  328 (353)
T 4ase_A          278 WEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----------------------------RAPDYTTPEMYQTMLDCWHGE  328 (353)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHHTCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHHcCCCC-----------------------------CCCccCCHHHHHHHHHHcCcC
Confidence            99998 899999876444443332210000                             011346899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||++|+++|
T Consensus       329 P~~RPt~~eil~~  341 (353)
T 4ase_A          329 PSQRPTFSELVEH  341 (353)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999987

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=1.8e-31  Score=236.58  Aligned_cols=166  Identities=20%  Similarity=0.330  Sum_probs=123.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++++||+|||+|+.......   .....+||+.|+|||++.+ ..|+.++||||+||+
T Consensus       145 ivHrDlkp~NILl~-------~~g~ikL~DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  213 (353)
T 3txo_A          145 IIYRDLKLDNVLLD-------HEGHCKLADFGMCKEGICNGV---TTATFCGTPDYIAPEILQE-MLYGPAVDWWAMGVL  213 (353)
T ss_dssp             CBCCCCCGGGEEEC-------TTSCEEECCCTTCBCSCC------------CCGGGCCHHHHHH-HHCTTHHHHHHHHHH
T ss_pred             CcccCCCHHHEEEC-------CCCCEEEccccceeecccCCc---cccccCCCcCeEChhhcCC-CCcCCccCCCcchHH
Confidence            36999999999999       899999999999986433221   1356789999999999875 459999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|+.||.+.+..+.+..|......                               +...+++++.+||.+||+.|
T Consensus       214 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~~~~~~~li~~lL~~d  262 (353)
T 3txo_A          214 LYEMLCGHAPFEAENEDDLFEAILNDEVV-------------------------------YPTWLHEDATGILKSFMTKN  262 (353)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCC-------------------------------CCCCCCHHHHHHHHHHhhhC
Confidence            99999999999999988877777542111                               11246799999999999999


Q ss_pred             CCCCCCH------HHHhcCCccccccCCCCCCchhhhhhhhhcccCCCcccccccccccccccc
Q psy7274         165 PHKRIGV------EDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  222 (308)
Q Consensus       165 P~~R~t~------~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  222 (308)
                      |.+|+++      +++++||||+.+        +|.....+  ...|+.++......+..+|+.
T Consensus       263 P~~R~~~~~~~~~~~il~hp~f~~~--------~w~~l~~~--~~~~p~~p~~~~~~~~~~f~~  316 (353)
T 3txo_A          263 PTMRLGSLTQGGEHAILRHPFFKEI--------DWAQLNHR--QIEPPFRPRIKSREDVSNFDP  316 (353)
T ss_dssp             GGGSTTSGGGTCTHHHHTSGGGTTC--------CHHHHHTT--CSCCSCCCCCCSTTCCTTSCH
T ss_pred             HHHccCCcccCCHHHHhhCCcccCC--------CHHHHhcC--cCCCCccCCCCCcccccccCc
Confidence            9999998      899999999763        44333222  234444555555555555543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=8.9e-31  Score=230.64  Aligned_cols=166  Identities=21%  Similarity=0.386  Sum_probs=126.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .+|.+||+|||+|+......   ......+||+.|+|||++.+ ..++.++||||+||+
T Consensus       126 ivHrDlkp~NIll~-------~~g~vkL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  194 (337)
T 1o6l_A          126 VVYRDIKLENLMLD-------KDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV  194 (337)
T ss_dssp             CBCCCCCGGGEEEC-------TTSCEEECCCTTCBCSCCTT---CCBCCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHH
T ss_pred             eecCcCCHHHEEEC-------CCCCEEEeeccchhhcccCC---CcccccccChhhCChhhhcC-CCCCchhhcccchhH
Confidence            36999999999999       89999999999998643322   12456799999999999864 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|+.||.+.+.......+....-                               .+...+++++.+||.+||+.|
T Consensus       195 l~ell~g~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~s~~~~~li~~lL~~d  243 (337)
T 1o6l_A          195 MYEMMCGRLPFYNQDHERLFELILMEEI-------------------------------RFPRTLSPEAKSLLAGLLKKD  243 (337)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCC-------------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCCCCCCHHHHHHHHHHhhcC
Confidence            9999999999998887666665543110                               011246899999999999999


Q ss_pred             CCCCC-----CHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCcccccccccccccccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  222 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  222 (308)
                      |.+|+     +++++++||||..+        +|.....+  ...|+..+.+....+..+|+.
T Consensus       244 P~~R~g~~~~~~~ei~~h~~f~~~--------~~~~~~~~--~~~pp~~p~~~~~~d~~~f~~  296 (337)
T 1o6l_A          244 PKQRLGGGPSDAKEVMEHRFFLSI--------NWQDVVQK--KLLPPFKPQVTSEVDTRYFDD  296 (337)
T ss_dssp             TTTSTTCSTTTHHHHHTSGGGTTC--------CHHHHHTT--CSCCSCCCCCSSTTCCTTSCH
T ss_pred             HHHhcCCCCCCHHHHHcCCCcCCC--------CHHHHHhC--CCCCCCCCCCCCcchhhcccc
Confidence            99999     89999999999763        44433322  233444455555666666654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.1e-31  Score=237.78  Aligned_cols=165  Identities=33%  Similarity=0.675  Sum_probs=132.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.      .++.+||+|||+|+.......    ....+||+.|+|||++.+...++.++||||+||++
T Consensus       163 ~H~Dikp~Nil~~~------~~~~~kl~Dfg~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          163 CHRDIKPQNLLVNS------KDNTLKLCDFGSAKKLIPSEP----SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             ECSCCCGGGEEEET------TTTEEEECCCTTCEECCTTSC----CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             ccCccCHHHEEEcC------CCCcEEEEECCCCcccCCCCC----CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            69999999999962      478899999999997654322    34568899999999988766699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccC-CCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY-PNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|++||.+.+..+++..+...+|.|..+.+........   ....+......|...+ ...++++.+||.+||+.|
T Consensus       233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (383)
T 3eb0_A          233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYT---EVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE  309 (383)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC-----CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccc---cccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999999999999999999887654321100   0112222333343333 347899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||+.|+|+||||+.+
T Consensus       310 P~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          310 PDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             GGGSCCHHHHHTSGGGHHH
T ss_pred             hhhCCCHHHHhcCHHHHHH
Confidence            9999999999999999764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=3.1e-31  Score=240.97  Aligned_cols=171  Identities=19%  Similarity=0.306  Sum_probs=131.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh----CCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||+|+........  ..+..+||+.|+|||++.    +...|+.++||||+
T Consensus       197 iHrDLKp~NILl~-------~~g~vkL~DFGla~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSl  267 (437)
T 4aw2_A          197 VHRDIKPDNILMD-------MNGHIRLADFGSCLKLMEDGTV--QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL  267 (437)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECCTTSCE--ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHH
T ss_pred             EecccCHHHeeEc-------CCCCEEEcchhhhhhcccCCCc--ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHH
Confidence            6999999999999       8999999999999876543221  134568999999999986    23458999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|||++|++||.+.+..+.+..|......                    .      .+......+++++++||++||
T Consensus       268 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------------~------~~p~~~~~~s~~~~dLi~~lL  321 (437)
T 4aw2_A          268 GVCMYEMLYGETPFYAESLVETYGKIMNHKER--------------------F------QFPTQVTDVSENAKDLIRRLI  321 (437)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH--------------------C------CCCSSCCCSCHHHHHHHHTTS
T ss_pred             HHHHHHHHhCCCCCCCCChhHHHHhhhhcccc--------------------c------cCCcccccCCHHHHHHHHHHh
Confidence            99999999999999999988887777532110                    0      011112357899999999999


Q ss_pred             ccCCCC--CCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccc
Q psy7274         162 TFNPHK--RIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  223 (308)
Q Consensus       162 ~~dP~~--R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  223 (308)
                      +.+|.+  |++++|+++||||+.+            .|..+....|+..+.+....+..+|+..
T Consensus       322 ~~~~~r~~r~~~~eil~Hpff~~i------------~w~~l~~~~~p~~P~~~~~~d~~~fd~~  373 (437)
T 4aw2_A          322 CSREHRLGQNGIEDFKKHPFFSGI------------DWDNIRNCEAPYIPEVSSPTDTSNFDVD  373 (437)
T ss_dssp             SCGGGCTTTTTTHHHHTSGGGTTC------------CTTTGGGSCCSCCCCCSSTTCCTTSCCC
T ss_pred             cccccccCCCCHHHHhCCCccCCC------------CHHHHhhCCCCCCCcCCCccchhhcCCc
Confidence            999888  9999999999999874            2333344556666666666666666543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=5.8e-31  Score=233.18  Aligned_cols=177  Identities=33%  Similarity=0.502  Sum_probs=132.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC-CCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+|+....... ........+||+.|+|||++.+...++.++||||+||+
T Consensus       146 vH~Dlkp~NIl~~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  218 (351)
T 3mi9_A          146 LHRDMKAANVLIT-------RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI  218 (351)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred             eCCCCCHHHEEEc-------CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHH
Confidence            6999999999999       889999999999987653221 11224567899999999998766668999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccC--CCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY--PNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~ll~~~L~  162 (308)
                      +++|++|++||.+.+..+++..+....+.+++..+................ ..........  ...++.+.+||.+||+
T Consensus       219 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~  297 (351)
T 3mi9_A          219 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK-GQKRKVKDRLKAYVRDPYALDLIDKLLV  297 (351)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCS-SCCCCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhccccccc-ccccCHHHHhhhccCChHHHHHHHHHhc
Confidence            999999999999999999999999999988876655432211100000000 0000000000  0136789999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccCCCCCC
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYDPADEP  190 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~~~~~~  190 (308)
                      .||.+|||++|+|+||||.....+....
T Consensus       298 ~dP~~R~t~~e~l~hp~f~~~~~~~~~~  325 (351)
T 3mi9_A          298 LDPAQRIDSDDALNHDFFWSDPMPSDLK  325 (351)
T ss_dssp             SSGGGSCCHHHHHTSGGGGSSSCCCCSH
T ss_pred             CChhhCCCHHHHhCCCCcCCCCCccccc
Confidence            9999999999999999998766555443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=1.2e-31  Score=231.60  Aligned_cols=136  Identities=16%  Similarity=0.219  Sum_probs=109.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       +++.+||+|||+|+........ ......+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       150 iHRDlKp~NILl~-------~~~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl  220 (299)
T 4asz_A          150 VHRDLATRNCLVG-------ENLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVL  220 (299)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCSCHHHHTGGGCE-EETTTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ccCccCHhhEEEC-------CCCcEEECCcccceecCCCCce-eecCceecChhhcCHHHHcC-CCCCchhhHHHHHHHH
Confidence            6999999999999       8999999999999876433211 11234579999999999976 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||+| |+.||.+.+..+.+..+......+                              ....+++++.+||.+||+.|
T Consensus       221 ~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~------------------------------~p~~~~~~~~~li~~cl~~d  270 (299)
T 4asz_A          221 WEIFTYGKQPWYQLSNNEVIECITQGRVLQ------------------------------RPRTCPQEVYELMLGCWQRE  270 (299)
T ss_dssp             HHHHTTTCCTTTTSCHHHHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCccchHHHHHHHHHHcCCC
Confidence            99998 899999988877776665421111                              11356789999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |++|||+++++  ++++.
T Consensus       271 P~~RPs~~~i~--~~L~~  286 (299)
T 4asz_A          271 PHMRKNIKGIH--TLLQN  286 (299)
T ss_dssp             GGGSCCHHHHH--HHHHH
T ss_pred             hhHCcCHHHHH--HHHHH
Confidence            99999999994  56644

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=4.3e-31  Score=233.34  Aligned_cols=166  Identities=26%  Similarity=0.402  Sum_probs=117.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .+|.+||+|||+|+.......   .....+||+.|+|||++.+ ..++.++||||+||+
T Consensus       139 ivHrDlkp~NIll~-------~~g~vkL~DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  207 (345)
T 1xjd_A          139 IVYRDLKLDNILLD-------KDGHIKIADFGMCKENMLGDA---KTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVL  207 (345)
T ss_dssp             CBCCCCCGGGEEEC-------TTSCEEECCCTTCBCCCCTTC---CBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHH
T ss_pred             eEeCCCChhhEEEC-------CCCCEEEeEChhhhhcccCCC---cccCCCCCcccCChhhhcC-CCCCChhhhHHHHHH
Confidence            36999999999999       899999999999986533221   1356799999999999865 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|+.||.+.+..+.+..|....  +                             .+...+++++.+||.+||+.|
T Consensus       208 l~ell~g~~Pf~~~~~~~~~~~i~~~~--~-----------------------------~~p~~~s~~~~~li~~lL~~d  256 (345)
T 1xjd_A          208 LYEMLIGQSPFHGQDEEELFHSIRMDN--P-----------------------------FYPRWLEKEAKDLLVKLFVRE  256 (345)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCC--C-----------------------------CCCTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHhCC--C-----------------------------CCCcccCHHHHHHHHHHhcCC
Confidence            999999999999988777766664311  0                             011246899999999999999


Q ss_pred             CCCCCCHH-HHhcCCccccccCCCCCCchhhhhhhhhcccCCCcccccccccccccccc
Q psy7274         165 PHKRIGVE-DALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  222 (308)
Q Consensus       165 P~~R~t~~-eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  222 (308)
                      |.+|+|+. ++++||||+.+        +|.....  ....|+.++......+..+|+.
T Consensus       257 p~~R~~~~~~i~~hp~f~~~--------~w~~l~~--~~~~~p~~p~~~~~~d~~~f~~  305 (345)
T 1xjd_A          257 PEKRLGVRGDIRQHPLFREI--------NWEELER--KEIDPPFRPKVKSPFDCSNFDK  305 (345)
T ss_dssp             GGGSBTTBSCGGGSGGGTTC--------CHHHHHT--TCSCC-----------------
T ss_pred             HhHcCCChHHHHcCccccCC--------CHHHHhh--CCCCCCcCCCCCCcchhhhcch
Confidence            99999998 99999999763        3333222  1234555555555556666654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=1.1e-30  Score=234.17  Aligned_cols=164  Identities=32%  Similarity=0.557  Sum_probs=124.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.     +.++.+||+|||+|+.....      ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       181 vHrDlkp~NIll~~-----~~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il  248 (382)
T 2vx3_A          181 IHCDLKPENILLCN-----PKRSAIKIVDFGSSCQLGQR------IYQYIQSRFYRSPEVLLG-MPYDLAIDMWSLGCIL  248 (382)
T ss_dssp             ECCCCSGGGEEESS-----TTSCCEEECCCTTCEETTCC------CCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             EcCCCCcccEEEec-----CCCCcEEEEeccCceecccc------cccccCCccccChHHHcC-CCCCcHHHHHHHHHHH
Confidence            69999999999951     15788999999999876432      345689999999999875 4599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCC---------C--------CCccccC--
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKP---------K--------VPWEILY--  146 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~--------~~~~~~~--  146 (308)
                      +||++|++||.+.+..+++..+....+.++...+...  ...+.+...++...         .        ..+....  
T Consensus       249 ~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  326 (382)
T 2vx3_A          249 VEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA--PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGV  326 (382)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTC--TTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTT
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh--HHHHHHHHhccccccccccccccccccCCcchhhHHHHhhc
Confidence            9999999999999999999999999999887665532  22333333332110         0        0000000  


Q ss_pred             ---------CC-------CChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         147 ---------PN-------ADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       147 ---------~~-------~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                               ..       .++++++||.+||+.||.+|||++|+|+||||+..
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          327 ETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             cccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                     00       01378999999999999999999999999999764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=2.7e-30  Score=236.21  Aligned_cols=168  Identities=20%  Similarity=0.396  Sum_probs=126.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......   ......+||+.|+|||++.+ ..|+.++||||+||+
T Consensus       270 iiHrDlkp~NIll~-------~~~~~kl~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  338 (446)
T 4ejn_A          270 VVYRDLKLENLMLD-------KDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV  338 (446)
T ss_dssp             CCCCCCCGGGEEEC-------SSSCEEECCCCCCCTTCC--------CCSSSCGGGCCHHHHHT-SCCCTHHHHHHHHHH
T ss_pred             EEECCCCHHHEEEC-------CCCCEEEccCCCceeccCCC---cccccccCCccccCHhhcCC-CCCCCccchhhhHHH
Confidence            36999999999999       88999999999998643322   12456799999999999875 559999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++||++|+.||.+.+.......+......                               +...+++++.+||.+||+.|
T Consensus       339 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~~~~~~~li~~~L~~d  387 (446)
T 4ejn_A          339 MYEMMCGRLPFYNQDHEKLFELILMEEIR-------------------------------FPRTLGPEAKSLLSGLLKKD  387 (446)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHhCCCC-------------------------------CCccCCHHHHHHHHHHcccC
Confidence            99999999999998877766665432110                               11246799999999999999


Q ss_pred             CCCCC-----CHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCcccccccccccccccccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  224 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~  224 (308)
                      |.+|+     |++|+++||||+.+        .|.....+  ...|+..+......+..+|+..+
T Consensus       388 P~~R~~~~~~t~~ell~hp~f~~~--------~~~~~~~~--~~~pp~~p~~~~~~~~~~~~~~~  442 (446)
T 4ejn_A          388 PKQRLGGGSEDAKEIMQHRFFAGI--------VWQHVYEK--KLSPPFKPQVTSETDTRYFDEEF  442 (446)
T ss_dssp             TTTSTTCSTTTHHHHHTSGGGTTC--------CHHHHHTT--CSCCSCCCSCSSTTCCTTC----
T ss_pred             HHHhCCCCCCCHHHHHhCccccCC--------CHHHHhhC--cCCCCccCCCCCccchhhcchhh
Confidence            99999     99999999999763        44444333  23445555566666777776543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=2.5e-30  Score=232.09  Aligned_cols=167  Identities=21%  Similarity=0.359  Sum_probs=121.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......   ....+.+||+.|+|||++.+ ..|+.++||||+||+
T Consensus       174 ivHrDLKp~NILl~-------~~g~ikL~DFGla~~~~~~~---~~~~~~~gt~~Y~aPE~l~~-~~~~~~~DiwslGvl  242 (396)
T 4dc2_A          174 IIYRDLKLDNVLLD-------SEGHIKLTDYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVL  242 (396)
T ss_dssp             CBCCCCCGGGEEEC-------TTSCEEECCCTTCBCCCCTT---CCBCCCCBCGGGCCHHHHTT-CCBCTHHHHHHHHHH
T ss_pred             EEeccCCHHHEEEC-------CCCCEEEeecceeeecccCC---CccccccCCcccCCchhhcC-CCCChHHHHHHHHHH
Confidence            36999999999999       89999999999998643222   12456799999999999875 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHH---------HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          85 LAEMISNRPIFPGKHYLD---------QLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~---------~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      +|||++|++||.+....+         ....+..                       ..        ..+...+++++.+
T Consensus       243 lyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~-----------------------~~--------~~~p~~~s~~~~~  291 (396)
T 4dc2_A          243 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-----------------------KQ--------IRIPRSLSVKAAS  291 (396)
T ss_dssp             HHHHHHSSCSSTTTTC------CCHHHHHHHHHH-----------------------CC--------CCCCTTSCHHHHH
T ss_pred             HHHHHhCCCCCcccccccccchhhHHHHHHHHhc-----------------------cc--------cCCCCcCCHHHHH
Confidence            999999999997543211         1111111                       00        0112357899999


Q ss_pred             HHHHhcccCCCCCCCH------HHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccc
Q psy7274         156 LLGKMLTFNPHKRIGV------EDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  223 (308)
Q Consensus       156 ll~~~L~~dP~~R~t~------~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  223 (308)
                      ||.+||+.||.+|+++      +|+++||||+.        ++|.....+  ...|+..+.+....+..+|+..
T Consensus       292 li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~--------i~w~~l~~~--~~~pp~~p~~~~~~d~~~fd~~  355 (396)
T 4dc2_A          292 VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN--------VDWDMMEQK--QVVPPFKPNISGEFGLDNFDSQ  355 (396)
T ss_dssp             HHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT--------CCHHHHHTT--CSCCSCCCCCCSSTTGGGSCHH
T ss_pred             HHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC--------CCHHHHHcC--CCCCCCcCCCCCccchhhcChh
Confidence            9999999999999995      79999999976        344433322  2345555666666666666543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=2.3e-30  Score=229.34  Aligned_cols=136  Identities=22%  Similarity=0.357  Sum_probs=112.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .+|++||+|||+|+.......   .....+||+.|+|||++.+ ..++.++||||+||+
T Consensus       142 ivHrDlkp~NIll~-------~~g~vkL~DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  210 (353)
T 2i0e_A          142 IIYRDLKLDNVMLD-------SEGHIKIADFGMCKENIWDGV---TTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVL  210 (353)
T ss_dssp             CBCCCCCGGGEEEC-------TTSCEEECCCTTCBCCCCTTC---CBCCCCSCGGGCCHHHHTT-CCBSTHHHHHHHHHH
T ss_pred             EEeccCCHHHEEEc-------CCCcEEEEeCCcccccccCCc---ccccccCCccccChhhhcC-CCcCCcccccchHHH
Confidence            36999999999999       899999999999986432221   1356789999999999864 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|+.||.+.+..+.+..|.....                               .+...+++++.+||.+||+.|
T Consensus       211 l~ell~G~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~s~~~~~li~~lL~~d  259 (353)
T 2i0e_A          211 LYEMLAGQAPFEGEDEDELFQSIMEHNV-------------------------------AYPKSMSKEAVAICKGLMTKH  259 (353)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCC-------------------------------CCCTTSCHHHHHHHHHHTCSC
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHhCCC-------------------------------CCCCCCCHHHHHHHHHHhhcC
Confidence            9999999999999888777766654211                               011356899999999999999


Q ss_pred             CCCCCC-----HHHHhcCCcccc
Q psy7274         165 PHKRIG-----VEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t-----~~eil~hp~f~~  182 (308)
                      |.+|++     ++++++||||+.
T Consensus       260 P~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          260 PGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             TTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HHHcCCCCCCCHHHHhcCccccC
Confidence            999995     699999999976

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=9.7e-31  Score=235.94  Aligned_cols=174  Identities=21%  Similarity=0.324  Sum_probs=131.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCC---CCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG---YTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~---~~~~~DiWSlG   82 (308)
                      .||||||+|||++       .++.+||+|||+|+.......  ....+.+||+.|+|||++.+...   |+.++||||+|
T Consensus       190 vHrDLKp~NILl~-------~~g~ikL~DFG~a~~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlG  260 (410)
T 3v8s_A          190 IHRDVKPDNMLLD-------KSGHLKLADFGTCMKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  260 (410)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECCTTSE--EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHH
T ss_pred             EeccCCHHHeeEC-------CCCCEEEeccceeEeeccCCc--ccccCCcCCccccCHHHhhccCCCcCCCCcceEecch
Confidence            6999999999999       899999999999987654321  11346799999999999875322   78999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++|||++|++||.+.+..+.+..|.......                  ..+         ....++.++++||.+||+
T Consensus       261 vilyell~G~~Pf~~~~~~~~~~~i~~~~~~~------------------~~p---------~~~~~s~~~~~li~~lL~  313 (410)
T 3v8s_A          261 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL------------------TFP---------DDNDISKEAKNLICAFLT  313 (410)
T ss_dssp             HHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC------------------CCC---------TTCCCCHHHHHHHHHHSS
T ss_pred             HHHHHHHhCCCCCCCCChhhHHHHHHhccccc------------------cCC---------CcccccHHHHHHHHHHcc
Confidence            99999999999999999888777775321000                  000         012568999999999999


Q ss_pred             cCCCC--CCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccC
Q psy7274         163 FNPHK--RIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  225 (308)
Q Consensus       163 ~dP~~--R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~  225 (308)
                      .+|.+  |++++|+++||||+.+        +|.  +.......|+..+.+....+..+|+.+..
T Consensus       314 ~~~~rlgR~~~~ei~~Hp~f~~~--------~w~--~~~~~~~~~p~~p~~~~~~d~~~fd~~~~  368 (410)
T 3v8s_A          314 DREVRLGRNGVEEIKRHLFFKND--------QWA--WETLRDTVAPVVPDLSSDIDTSNFDDLEE  368 (410)
T ss_dssp             CGGGCTTSSCHHHHHTSGGGCCS--------SCC--STTGGGSCCSCCCCCSSTTCCTTSCCCCS
T ss_pred             ChhhhCCCCCHHHHhcCccccCC--------CHH--HHhhcccCCCCCCcCCCccchhhcCCccc
Confidence            99988  9999999999999874        111  11223345666667777778888876533

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=1.1e-30  Score=229.67  Aligned_cols=168  Identities=32%  Similarity=0.602  Sum_probs=125.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......   .....+||..|+|||++.+...++.++||||+||+
T Consensus       145 ivH~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~i  214 (331)
T 4aaa_A          145 IIHRDIKPENILVS-------QSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCL  214 (331)
T ss_dssp             CCCCCCCGGGEEEC-------TTSCEEECCCTTC---------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred             EEccCcChheEEEc-------CCCcEEEEeCCCceeecCCcc---ccCCCcCCccccCcccccCCCCcchHHHHHHHHHH
Confidence            36999999999999       889999999999987644321   13456899999999998765568999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+.+..+....+...+........................+.....+.+++.+.+||.+||+.|
T Consensus       215 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  294 (331)
T 4aaa_A          215 VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID  294 (331)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccC
Confidence            99999999999999999999999988888777554332111100000000112223344456678999999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||++|+|+||||+.
T Consensus       295 P~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          295 PDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             GGGSCCGGGGGGSHHHHG
T ss_pred             cccCCCHHHHhcCchhcc
Confidence            999999999999999975

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=1e-30  Score=235.89  Aligned_cols=170  Identities=21%  Similarity=0.301  Sum_probs=122.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC------CCCCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN------SKGYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~~~~DiW   79 (308)
                      .||||||+|||++       .++++||+|||+|+........  .....+||+.|+|||++..      ...|+.++|||
T Consensus       184 iHrDLKp~NILld-------~~g~vkL~DFGla~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~Diw  254 (412)
T 2vd5_A          184 VHRDIKPDNILLD-------RCGHIRLADFGSCLKLRADGTV--RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW  254 (412)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECCTTSCE--ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHH
T ss_pred             eecccCHHHeeec-------CCCCEEEeechhheeccCCCcc--ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhh
Confidence            6999999999999       8999999999999876543221  1234689999999999862      34589999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          80 SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |+||++|||++|+.||.+.+..+.+..|......                    .      .+......+++++++||.+
T Consensus       255 SlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~--------------------~------~~p~~~~~~s~~~~dli~~  308 (412)
T 2vd5_A          255 ALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH--------------------L------SLPLVDEGVPEEARDFIQR  308 (412)
T ss_dssp             HHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH--------------------C------CCC----CCCHHHHHHHHT
T ss_pred             HHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC--------------------c------CCCccccCCCHHHHHHHHH
Confidence            9999999999999999999888777776532100                    0      0001123578999999999


Q ss_pred             hcccCCCCCC---CHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccc
Q psy7274         160 MLTFNPHKRI---GVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  223 (308)
Q Consensus       160 ~L~~dP~~R~---t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  223 (308)
                      ||+ +|.+|+   +++|+++||||+.+            .|..+....|+..+......++.+|+..
T Consensus       309 lL~-~p~~Rlgr~~~~ei~~Hpff~~i------------~w~~l~~~~~p~~p~~~~~~d~~~f~~~  362 (412)
T 2vd5_A          309 LLC-PPETRLGRGGAGDFRTHPFFFGL------------DWDGLRDSVPPFTPDFEGATDTCNFDLV  362 (412)
T ss_dssp             TSS-CGGGCTTTTTHHHHHTSGGGTTC------------CSTTSTTSCCSCCCC-----CCSSCC--
T ss_pred             HcC-ChhhcCCCCCHHHHhcCCCcCCC------------CHHHHhhcCCCCCCcCCCcccccccCcc
Confidence            999 999985   89999999999874            2233333445555556666666666543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=5.2e-31  Score=231.55  Aligned_cols=171  Identities=35%  Similarity=0.570  Sum_probs=122.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++..  ..+..+.+||+|||+|+.......   ..+..+||..|+|||++.+...++.++||||+||++
T Consensus       154 vH~Dlkp~NIll~~~--~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  228 (329)
T 3gbz_A          154 LHRDLKPQNLLLSVS--DASETPVLKIGDFGLARAFGIPIR---QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIW  228 (329)
T ss_dssp             CCSCCCGGGEEEEC-------CCEEEECCTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             ECCCCCHHHEEEecC--CCCccceEEECcCCCccccCCccc---ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHH
Confidence            699999999999510  001456699999999987653321   135568899999999997656689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcccc-CCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL-YPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+.||.+.+..+.+..+....+.|....+......  ..+....+......+... ...+++++.+||.+||+.|
T Consensus       229 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  306 (329)
T 3gbz_A          229 AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL--PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD  306 (329)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS--TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh--hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence            9999999999999999999999999998887665533211  011111111111111111 1226789999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++|+|+||||+..
T Consensus       307 P~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          307 PVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             GGGSCCHHHHHTSGGGSSS
T ss_pred             hhhCCCHHHHhCCcccCCC
Confidence            9999999999999999764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=1.2e-30  Score=227.83  Aligned_cols=178  Identities=37%  Similarity=0.703  Sum_probs=132.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.      .++.+||+|||+++................||.+|+|||++.+...++.++||||+||++
T Consensus       142 ~H~dlkp~Nil~~~------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  215 (320)
T 2i6l_A          142 LHRDLKPANLFINT------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF  215 (320)
T ss_dssp             BCCCCSGGGEEEET------TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcC------CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHH
Confidence            69999999999961      457899999999987654322222345567899999999987656799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+....+.+...........- ..+.......+..++....+.++.++.+||.+||+.||
T Consensus       216 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  294 (320)
T 2i6l_A          216 AEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVI-PVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP  294 (320)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTS-CHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcC-cccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCc
Confidence            99999999999999999999888887777666554432210 11111111223344555667889999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEP  190 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~  190 (308)
                      .+|||++++++||||+....+..++
T Consensus       295 ~~Rpt~~ell~hp~~~~~~~p~~~~  319 (320)
T 2i6l_A          295 MDRLTAEEALSHPYMSIYSFPMDEP  319 (320)
T ss_dssp             GGSCCHHHHHTSHHHHTTCC-----
T ss_pred             cccCCHHHHhCCcccccccCccCCC
Confidence            9999999999999998876665554

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=5e-30  Score=227.90  Aligned_cols=138  Identities=25%  Similarity=0.383  Sum_probs=114.9

Q ss_pred             CCCCCCCCCcccCccccccCCCC----CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA----DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~----~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++    .+||+|||+|+.......    ....+||+.|+|||++.+ ..++.++||||+
T Consensus       137 vHrDlkp~NIll~-------~~~~~~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Diwsl  204 (361)
T 2yab_A          137 AHFDLKPENIMLL-------DKNIPIPHIKLIDFGLAHEIEDGVE----FKNIFGTPEFVAPEIVNY-EPLGLEADMWSI  204 (361)
T ss_dssp             ECCCCSGGGEEES-------CTTSSSCCEEECCCSSCEECCTTCC----CCCCCSCGGGCCHHHHTT-CCCCTHHHHHHH
T ss_pred             ccCCCCHHHEEEe-------CCCCCccCEEEEecCCceEcCCCCc----cccCCCCccEECchHHcC-CCCCccccHHHH
Confidence            6999999999998       554    799999999987654321    355689999999999864 569999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|+|++|.+||.+.+..+.+..+........+..                           ++.+++.+++||.+||
T Consensus       205 Gvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~s~~~~~li~~~L  257 (361)
T 2yab_A          205 GVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF---------------------------FSQTSELAKDFIRKLL  257 (361)
T ss_dssp             HHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHH---------------------------HTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchh---------------------------ccCCCHHHHHHHHHHC
Confidence            9999999999999999988887777765433333222                           2356899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ..||.+|||++|+++||||+.
T Consensus       258 ~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          258 VKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             CSSTTTSCCHHHHHTSTTTSC
T ss_pred             CCChhHCcCHHHHhcCcCcCC
Confidence            999999999999999999975

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=4.5e-30  Score=245.31  Aligned_cols=167  Identities=20%  Similarity=0.371  Sum_probs=128.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++++||+|||+|+.......   .....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       464 iHrDLKp~NILl~-------~~g~ikL~DFGla~~~~~~~~---~~~~~~GT~~Y~APE~l~~-~~~~~~~DvwSlGvil  532 (674)
T 3pfq_A          464 IYRDLKLDNVMLD-------SEGHIKIADFGMCKENIWDGV---TTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLL  532 (674)
T ss_dssp             ECCCCCSTTEEEC-------SSSCEEECCCTTCEECCCTTC---CBCCCCSCSSSCCHHHHTC-CCBSTHHHHHHHHHHH
T ss_pred             EeccCChhhEEEc-------CCCcEEEeecceeeccccCCc---ccccccCCCcccCHhhhcC-CCCCccceEechHHHH
Confidence            6999999999999       899999999999986433221   1456799999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..|.....                               .+...+++++.+||.+||+.||
T Consensus       533 yelltG~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~s~~~~~li~~lL~~dP  581 (674)
T 3pfq_A          533 YEMLAGQAPFEGEDEDELFQSIMEHNV-------------------------------AYPKSMSKEAVAICKGLMTKHP  581 (674)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHSSCC-------------------------------CCCTTSCHHHHHHHHHHSCSSS
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhCCC-------------------------------CCCccCCHHHHHHHHHHccCCH
Confidence            999999999999988887777753211                               0113578999999999999999


Q ss_pred             CCCCCH-----HHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccC
Q psy7274         166 HKRIGV-----EDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  225 (308)
Q Consensus       166 ~~R~t~-----~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~  225 (308)
                      .+|+++     ++|++||||+.        ++|.....+.  ..|+..+.... .+..+|++++.
T Consensus       582 ~~R~~~~~~~~~ei~~h~ff~~--------i~w~~l~~~~--~~pp~~p~~~~-~~~~~f~~~~~  635 (674)
T 3pfq_A          582 GKRLGCGPEGERDIKEHAFFRY--------IDWEKLERKE--IQPPYKPKASG-RNAENFDRFFT  635 (674)
T ss_dssp             TTCTTCSTTHHHHHHSSGGGSS--------CCHHHHTTTC--SCCSCCCBCCG-GGHHHHTTTTT
T ss_pred             HHCCCCCCCcHHHHhcCccccC--------CCHHHHHhCC--CCCCCCCcCCC-CchhhcCchhc
Confidence            999997     99999999976        3444433322  33444444444 56666665544

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=4.8e-30  Score=228.89  Aligned_cols=166  Identities=23%  Similarity=0.383  Sum_probs=122.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .+|++||+|||+|+.......   .....+||+.|+|||++.+ ..|+.++||||+||+
T Consensus       160 ivHrDlkp~NIll~-------~~g~ikL~DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  228 (373)
T 2r5t_A          160 IVYRDLKPENILLD-------SQGHIVLTDFGLCKENIEHNS---TTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAV  228 (373)
T ss_dssp             CCCCCCCGGGEEEC-------TTSCEEECCCCBCGGGBCCCC---CCCSBSCCCCCCCHHHHTT-CCCCTHHHHHHHHHH
T ss_pred             ceecCCCHHHEEEC-------CCCCEEEeeCccccccccCCC---ccccccCCccccCHHHhCC-CCCCchhhhHHHHHH
Confidence            36999999999999       899999999999986432211   2456799999999999864 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|..||.+.+..+.+..|....-                               .+.+.++.++.+||.+||+.|
T Consensus       229 l~ell~G~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~~~~~~~~~~~li~~lL~~d  277 (373)
T 2r5t_A          229 LYEMLYGLPPFYSRNTAEMYDNILNKPL-------------------------------QLKPNITNSARHLLEGLLQKD  277 (373)
T ss_dssp             HHHHHHSSCTTCCSBHHHHHHHHHHSCC-------------------------------CCCSSSCHHHHHHHHHHTCSS
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHhccc-------------------------------CCCCCCCHHHHHHHHHHcccC
Confidence            9999999999999888777766653210                               112357899999999999999


Q ss_pred             CCCCCCH----HHHhcCCccccccCCCCCCchhhhhhhhhcccCCCcccccccccccccccc
Q psy7274         165 PHKRIGV----EDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  222 (308)
Q Consensus       165 P~~R~t~----~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  222 (308)
                      |.+|+++    +++++||||+.        ++|.....+.  ..|+..+.+....+..+|+.
T Consensus       278 p~~R~~~~~~~~~i~~h~~f~~--------~~w~~l~~~~--~~pp~~p~~~~~~d~~~f~~  329 (373)
T 2r5t_A          278 RTKRLGAKDDFMEIKSHVFFSL--------INWDDLINKK--ITPPFNPNVSGPNDLRHFDP  329 (373)
T ss_dssp             GGGSTTTTTTHHHHHTSGGGTT--------CCHHHHHTTC--SCCSCCCSCCC---------
T ss_pred             HHhCCCCCCCHHHHhCCccccC--------CCHHHHHhCC--CCCCCCCCCCCcchhhhcCc
Confidence            9999986    69999999976        3454443332  23444444555555555553

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=1.3e-29  Score=224.43  Aligned_cols=162  Identities=22%  Similarity=0.346  Sum_probs=124.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       163 vHrDlkp~NIll~-------~~g~~kL~DFg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  228 (350)
T 1rdq_E          163 IYRDLKPENLLID-------QQGYIQVTDFGFAKRVKGR------TWTLCGTPEALAPEIILS-KGYNKAVDWWALGVLI  228 (350)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECSSC------BCCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             ccccCccceEEEC-------CCCCEEEcccccceeccCC------cccccCCccccCHHHhcC-CCCCCcCCEecccHhH
Confidence            6999999999999       8999999999999876432      245689999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.....                               .+...++.++.+||.+||+.||
T Consensus       229 ~ell~g~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~~~~~~~li~~lL~~dp  277 (350)
T 1rdq_E          229 YEMAAGYPPFFADQPIQIYEKIVSGKV-------------------------------RFPSHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCC-------------------------------CCCTTCCHHHHHHHHHHSCSCT
T ss_pred             hHHhhCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCCCCCCHHHHHHHHHHhhcCH
Confidence            999999999999887777666654211                               0113468999999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCcccccccccccccccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  222 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  222 (308)
                      .+|++     ++++++||||+.        ++|.....+  ...|+..+......+..+|+.
T Consensus       278 ~~R~~~~~~~~~ei~~h~~f~~--------~~w~~~~~~--~~~~p~~p~~~~~~~~~~f~~  329 (350)
T 1rdq_E          278 TKRFGNLKNGVNDIKNHKWFAT--------TDWIAIYQR--KVEAPFIPKFKGPGDTSNFDD  329 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTT--------CCHHHHHTT--CSCCSCCCCCCSTTCCTTSCC
T ss_pred             HhccCCccCCHHHHHhCcCcCC--------CCHHHHhhc--cCCCCCCCCCCCccccccccc
Confidence            99998     999999999975        344433322  223333344444555555553

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.96  E-value=3.4e-30  Score=228.99  Aligned_cols=169  Identities=25%  Similarity=0.364  Sum_probs=122.7

Q ss_pred             CCCCCCCCCcccCcccc------------------ccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh
Q psy7274           6 PHKRIGVEGALAHPYLE------------------QYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML   67 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~------------------~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~   67 (308)
                      .||||||+|||++....                  ....++.+||+|||+|+.....      ....+||+.|+|||++.
T Consensus       159 vHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~  232 (360)
T 3llt_A          159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------HGSIINTRQYRAPEVIL  232 (360)
T ss_dssp             ECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC------CCSCCSCGGGCCHHHHT
T ss_pred             eeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC------CcCccCcccccCcHHHc
Confidence            69999999999972000                  0013789999999999865432      24568999999999987


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCC------
Q psy7274          68 NSKGYTKSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP------  141 (308)
Q Consensus        68 ~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------  141 (308)
                      + ..++.++||||+||++|+|++|+.||.+.+..+.+..+....+.++...+..........+..........+      
T Consensus       233 ~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  311 (360)
T 3llt_A          233 N-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSI  311 (360)
T ss_dssp             T-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCH
T ss_pred             C-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccch
Confidence            5 559999999999999999999999999999999999999988887776554332221111111000000000      


Q ss_pred             ---------ccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccc
Q psy7274         142 ---------WEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       142 ---------~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~  181 (308)
                               ........++.+.+||.+||+.||.+|||++|+|+||||+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          312 NSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                     0000112347788999999999999999999999999995

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.96  E-value=1.2e-29  Score=221.84  Aligned_cols=132  Identities=28%  Similarity=0.438  Sum_probs=111.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+.....      ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       128 vHrDlkp~NIll~-------~~g~~kL~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  193 (318)
T 1fot_A          128 IYRDLKPENILLD-------KNGHIKITDFGFAKYVPDV------TYTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILI  193 (318)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCSSCEECSSC------BCCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHH
T ss_pred             cccCCChheEEEc-------CCCCEEEeecCcceecCCc------cccccCCccccCHhHhcC-CCCCcccchhhhHHHH
Confidence            6999999999999       8999999999999876432      245689999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+....+..+......                               +.+.+++++.+||.+||..||
T Consensus       194 ~ell~g~~pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~~~~~~~li~~lL~~dp  242 (318)
T 1fot_A          194 YEMLAGYTPFYDSNTMKTYEKILNAELR-------------------------------FPPFFNEDVKDLLSRLITRDL  242 (318)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHCCCC-------------------------------CCTTSCHHHHHHHHHHTCSCT
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------------------------CCCCCCHHHHHHHHHHhccCH
Confidence            9999999999998877777666542110                               113467999999999999999


Q ss_pred             CCCC-----CHHHHhcCCcccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~  182 (308)
                      .+|+     +++++++||||+.
T Consensus       243 ~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          243 SQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HHcCCCcCCCHHHHhcCccccC
Confidence            9999     8999999999976

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=2.2e-29  Score=222.48  Aligned_cols=136  Identities=21%  Similarity=0.364  Sum_probs=105.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++++||+|||+|+......   ......+||+.|+|||++.+ ..++.++||||+||+
T Consensus       131 ivHrDlkp~NIll~-------~~g~~kL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  199 (345)
T 3a8x_A          131 IIYRDLKLDNVLLD-------SEGHIKLTDYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVL  199 (345)
T ss_dssp             CBCCCCCGGGEEEC-------TTSCEEECCGGGCBCSCCTT---CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHH
T ss_pred             ceecCCCHHHEEEC-------CCCCEEEEeccccccccCCC---CcccccCCCccccCccccCC-CCCChHHhHHHHHHH
Confidence            36999999999999       89999999999998643222   12456799999999999865 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHH---------HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          85 LAEMISNRPIFPGKHYL---------DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~---------~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      +|||++|+.||.+....         .....+..                       ...        .+...++.++.+
T Consensus       200 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~-----------------------~~~--------~~p~~~s~~~~~  248 (345)
T 3a8x_A          200 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-----------------------KQI--------RIPRSLSVKAAS  248 (345)
T ss_dssp             HHHHHHSSCTTTTTTC-------CHHHHHHHHHH-----------------------CCC--------CCCTTSCHHHHH
T ss_pred             HHHHHhCCCCcCCcccccccccccHHHHHHHHHc-----------------------CCC--------CCCCCCCHHHHH
Confidence            99999999999653211         11111111                       000        012357899999


Q ss_pred             HHHHhcccCCCCCCCH------HHHhcCCcccc
Q psy7274         156 LLGKMLTFNPHKRIGV------EDALAHPYLEQ  182 (308)
Q Consensus       156 ll~~~L~~dP~~R~t~------~eil~hp~f~~  182 (308)
                      ||.+||+.||.+|+|+      +++++||||+.
T Consensus       249 li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          249 VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             HHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             HHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            9999999999999995      89999999976

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.96  E-value=2.4e-29  Score=220.29  Aligned_cols=165  Identities=39%  Similarity=0.653  Sum_probs=132.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......    .....+||..|+|||++.+ ..++.++||||+||+
T Consensus       141 i~H~dlkp~Nili~-------~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  208 (326)
T 1blx_A          141 VVHRDLKPQNILVT-------SSGQIKLADFGLARIYSFQM----ALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCI  208 (326)
T ss_dssp             CCCCCCCGGGEEEC-------TTCCEEECSCCSCCCCCGGG----GGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHH
T ss_pred             ceeccCCHHHeEEc-------CCCCEEEecCcccccccCCC----CccccccccceeCHHHHhc-CCCCcchhHHHHHHH
Confidence            37999999999999       88999999999998664321    1345689999999999865 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+.+..+....+.+....+........    .........+.....+.++..+.+||.+||..|
T Consensus       209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  284 (326)
T 1blx_A          209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN  284 (326)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCG----GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSS
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccch----hhhcccCcchhhhccccCCHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999887766543211000    011122333445566788999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~  185 (308)
                      |.+|||++++++||||+....
T Consensus       285 P~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          285 PAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             TTTSCCHHHHHTSGGGTTCCC
T ss_pred             cccCCCHHHHhcCccccccch
Confidence            999999999999999987533

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=2.3e-29  Score=217.95  Aligned_cols=139  Identities=26%  Similarity=0.393  Sum_probs=113.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........   ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       138 ~H~Dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  206 (297)
T 3fxz_A          138 IHRDIKSDNILLG-------MDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  206 (297)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCCTTCEECCSTTCC---BCCCCSCGGGCCHHHHHC-SCBCTHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEEC-------CCCCEEEeeCCCceecCCcccc---cCCccCCcCccChhhhcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       8899999999999876543221   345689999999999875 5599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+....+..+..... +..                           .....++..+.+||.+||+.||
T Consensus       207 ~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~~~~li~~~l~~dp  258 (297)
T 3fxz_A          207 IEMIEGEPPYLNENPLRALYLIATNGT-PEL---------------------------QNPEKLSAIFRDFLNRCLEMDV  258 (297)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHHCS-CCC---------------------------SCGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCC-CCC---------------------------CCccccCHHHHHHHHHHccCCh
Confidence            999999999998887766655543211 100                           0012467899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+++||||+..
T Consensus       259 ~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          259 EKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             TTSCCHHHHTTCGGGGGC
T ss_pred             hHCcCHHHHhhChhhccc
Confidence            999999999999999753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.96  E-value=2.8e-29  Score=228.73  Aligned_cols=144  Identities=28%  Similarity=0.434  Sum_probs=115.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.    ...++.+||+|||+|+.......   .....+||+.|+|||++.+ ..|+.++||||+||+
T Consensus       131 ivHrDlKp~NIll~~----~~~~~~vkL~DFG~a~~~~~~~~---~~~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvi  202 (444)
T 3soa_A          131 VVHRNLKPENLLLAS----KLKGAAVKLADFGLAIEVEGEQQ---AWFGFAGTPGYLSPEVLRK-DPYGKPVDLWACGVI  202 (444)
T ss_dssp             CBCCCCSSTTEEESB----SSTTCCEEECCCSSCBCCCTTCC---BCCCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHH
T ss_pred             ccccCCCHHHEEEec----cCCCCcEEEccCceeEEecCCCc---eeecccCCcccCCHHHhcC-CCCCCccccHHHHHH
Confidence            369999999999972    11357899999999987654322   1355789999999999864 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|.+||.+.+..+.+..+.......+..                           .++.+++++.+||.+||+.|
T Consensus       203 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~s~~~~~li~~~L~~d  255 (444)
T 3soa_A          203 LYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP---------------------------EWDTVTPEAKDLINKMLTIN  255 (444)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT---------------------------TTTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcc---------------------------ccccCCHHHHHHHHHHcCCC
Confidence            999999999999988877777765432222111                           12356899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++|+|+||||+..
T Consensus       256 P~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          256 PSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             TTTSCCHHHHHHSCTTHHH
T ss_pred             hhHCCCHHHHhcCccccCC
Confidence            9999999999999999753

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=1.1e-29  Score=222.81  Aligned_cols=167  Identities=28%  Similarity=0.534  Sum_probs=120.5

Q ss_pred             CCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++ .+||+|||+|+.......    ....+||..|+|||++.+...++.++||||+||+
T Consensus       152 vH~Dikp~Nil~~-------~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  220 (330)
T 3nsz_A          152 MHRDVKPHNVMID-------HEHRKLRLIDWGLAEFYHPGQE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM  220 (330)
T ss_dssp             ECCCCSGGGEEEE-------TTTTEEEECCCTTCEECCTTCC----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             eeCCCCHHHEEEc-------CCCCEEEEEeCCCceEcCCCCc----cccccccccccChhhhcCCCcCCchhhHHHHHHH
Confidence            6999999999998       566 899999999987654322    3456899999999998765679999999999999


Q ss_pred             HHHHhhCCCCC-CCCCHHHHHHHHHHhhCCCChhhHhhhhhHH-HHHHhhcCCCCCCCCccccC-----CCCChhHHHHH
Q psy7274          85 LAEMISNRPIF-PGKHYLDQLNHILGILGSPTPEDLSCIINEK-ARSYLQSLPFKPKVPWEILY-----PNADPNALDLL  157 (308)
Q Consensus        85 l~ell~g~~pf-~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~~ll  157 (308)
                      +++|++|+.|| .+.+..+++..+...++.+....+....... ...+...........+....     ..+++++.+||
T Consensus       221 l~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  300 (330)
T 3nsz_A          221 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL  300 (330)
T ss_dssp             HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHH
T ss_pred             HHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHH
Confidence            99999999887 5667778888887777643322111100000 00000011111222222222     22689999999


Q ss_pred             HHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         158 GKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .+||+.||.+|||++|+|+||||+.+
T Consensus       301 ~~~L~~dP~~Rpta~e~l~hp~f~~~  326 (330)
T 3nsz_A          301 DKLLRYDHQSRLTAREAMEHPYFYTV  326 (330)
T ss_dssp             HTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             HHHhcCCcccCCCHHHHhcCccHhhh
Confidence            99999999999999999999999875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=8.1e-30  Score=223.22  Aligned_cols=141  Identities=22%  Similarity=0.345  Sum_probs=116.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.     +.++.+||+|||+|+......    .....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       124 vH~Dlkp~NIl~~~-----~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  193 (321)
T 1tki_A          124 GHFDIRPENIIYQT-----RRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLV  193 (321)
T ss_dssp             ECCCCCGGGEEESS-----SSCCCEEECCCTTCEECCTTC----EEEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHH
T ss_pred             CcCCCCHHHEEEcc-----CCCCCEEEEECCCCeECCCCC----ccccccCChhhcCcHHhcC-CCCCchhhHHHHHHHH
Confidence            69999999999981     127899999999998775432    1345689999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|..||.+.+..+.+..+...........+                           +.++.++.+||.+||..||
T Consensus       194 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~---------------------------~~~s~~~~~li~~~L~~dp  246 (321)
T 1tki_A          194 YVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF---------------------------KEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH---------------------------TTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhh---------------------------ccCCHHHHHHHHHHcCCCh
Confidence            9999999999999888877777665443333222                           3568999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+|+||||+..
T Consensus       247 ~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          247 KSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGSCCHHHHHHSHHHHSC
T ss_pred             hHCcCHHHHhcChhhccC
Confidence            999999999999999764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=4e-29  Score=219.36  Aligned_cols=136  Identities=26%  Similarity=0.471  Sum_probs=108.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......   .....+||+.|+|||++.+ ..++.++||||+||+
T Consensus       142 ivH~Dlkp~Nill~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  210 (327)
T 3a62_A          142 IIYRDLKPENIMLN-------HQGHVKLTDFGLCKESIHDGT---VTHTFCGTIEYMAPEILMR-SGHNRAVDWWSLGAL  210 (327)
T ss_dssp             CCCCCCCTTTEEEC-------TTSCEEECCCSCC-------------CTTSSCCTTSCHHHHTT-SCCCTHHHHHHHHHH
T ss_pred             EEcccCCHHHeEEC-------CCCcEEEEeCCcccccccCCc---cccccCCCcCccCHhhCcC-CCCCCcccchhHHHH
Confidence            36999999999999       889999999999986433221   1345689999999999865 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+....+..+......                               +.+.++.++.+||.+||..|
T Consensus       211 l~el~~g~~pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~~~~~~~li~~~L~~d  259 (327)
T 3a62_A          211 MYDMLTGAPPFTGENRKKTIDKILKCKLN-------------------------------LPPYLTQEARDLLKKLLKRN  259 (327)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHTCCC-------------------------------CCTTSCHHHHHHHHHHSCSC
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhCCCC-------------------------------CCCCCCHHHHHHHHHHHhcC
Confidence            99999999999998877776666542110                               11346789999999999999


Q ss_pred             CCCCC-----CHHHHhcCCcccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~  182 (308)
                      |.+||     +++++++||||+.
T Consensus       260 p~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          260 AASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             GGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             HhhccCCCCCCHHHHHcCCcccC
Confidence            99999     8899999999976

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.96  E-value=4.8e-29  Score=218.75  Aligned_cols=138  Identities=26%  Similarity=0.419  Sum_probs=113.7

Q ss_pred             CCCCCCCCCcccCccccccCCCC----CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA----DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~----~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++    .+||+|||+|+.......    ....+||+.|+|||++.+ ..++.++||||+
T Consensus       136 vH~Dlkp~NIll~-------~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Diwsl  203 (326)
T 2y0a_A          136 AHFDLKPENIMLL-------DRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIVNY-EPLGLEADMWSI  203 (326)
T ss_dssp             ECCCCCGGGEEES-------CSSSSSCCEEECCCTTCEECCTTSC----CCCCCSCTTTCCHHHHTT-CCCCTHHHHHHH
T ss_pred             EcCCCCHHHEEEe-------cCCCCCCCEEEEECCCCeECCCCCc----cccccCCcCcCCceeecC-CCCCcHHHHHHH
Confidence            6999999999998       555    899999999987754321    345689999999999864 569999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|+|++|..||.+.+..+.+..+...........                           ++..+..+.+||.+||
T Consensus       204 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~L  256 (326)
T 2y0a_A          204 GVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY---------------------------FSNTSALAKDFIRRLL  256 (326)
T ss_dssp             HHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHH---------------------------HTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccc---------------------------cccCCHHHHHHHHHHc
Confidence            9999999999999999888777776655433222211                           2356789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ..||.+|||++++|+||||+.
T Consensus       257 ~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          257 VKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             CSSGGGSCCHHHHHHSTTTSC
T ss_pred             cCChhhCCCHHHHhcCCCccC
Confidence            999999999999999999975

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=3.2e-29  Score=225.17  Aligned_cols=145  Identities=26%  Similarity=0.427  Sum_probs=104.5

Q ss_pred             CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCC------HHH
Q psy7274          29 DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNRPIFPGKH------YLD  102 (308)
Q Consensus        29 ~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il~ell~g~~pf~~~~------~~~  102 (308)
                      .+||+|||+|+.....      .+..+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+      ..+
T Consensus       234 ~~kl~DfG~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~  306 (397)
T 1wak_A          234 KVKIADLGNACWVHKH------FTEDIQTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDED  306 (397)
T ss_dssp             CEEECCGGGCEETTBC------SCSCCSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHH
T ss_pred             ceEecccccccccccc------CccCCCCCcccCChhhcC-CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHH
Confidence            8999999999876432      345689999999999876 459999999999999999999999998765      577


Q ss_pred             HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCC---C-CCCCcc---------ccCCCCChhHHHHHHHhcccCCCCCC
Q psy7274         103 QLNHILGILGSPTPEDLSCIINEKARSYLQSLPF---K-PKVPWE---------ILYPNADPNALDLLGKMLTFNPHKRI  169 (308)
Q Consensus       103 ~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~---------~~~~~~s~~~~~ll~~~L~~dP~~R~  169 (308)
                      ++..+...+|.++...+......  ..+......   . ...++.         ......+..+.+||.+||+.||.+||
T Consensus       307 ~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  384 (397)
T 1wak_A          307 HIALIIELLGKVPRKLIVAGKYS--KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRA  384 (397)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTG--GGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSC
T ss_pred             HHHHHHHhcCCCChHHhhccccc--ccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcC
Confidence            88888899998877654321100  000000000   0 000000         00112346788999999999999999


Q ss_pred             CHHHHhcCCcccc
Q psy7274         170 GVEDALAHPYLEQ  182 (308)
Q Consensus       170 t~~eil~hp~f~~  182 (308)
                      |++|+|+||||++
T Consensus       385 t~~e~l~hp~~~~  397 (397)
T 1wak_A          385 TAAECLRHPWLNS  397 (397)
T ss_dssp             CHHHHHTSGGGGC
T ss_pred             CHHHHhhCccccC
Confidence            9999999999963

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=4e-29  Score=222.36  Aligned_cols=141  Identities=27%  Similarity=0.419  Sum_probs=112.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    ...++.+||+|||+|+......    .....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       150 vH~Dlkp~NIll~~----~~~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  220 (362)
T 2bdw_A          150 VHRNLKPENLLLAS----KAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVIL  220 (362)
T ss_dssp             BCCCCSGGGEEESC----SSTTCCEEECCCTTCBCCTTCC----SCCCSCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             EeccCchHHEEEec----CCCCCCEEEeecCcceEecCCc----ccccCCCCccccCHHHHcc-CCCCchhhHHHHHHHH
Confidence            69999999999971    0123569999999998765332    1345689999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|.+||.+.+....+..+.......+...                           +..+++++.+||.+||..||
T Consensus       221 ~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~L~~dP  273 (362)
T 2bdw_A          221 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE---------------------------WDTVTPEAKSLIDSMLTVNP  273 (362)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTG---------------------------GGGSCHHHHHHHHHHSCSSG
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHhCCCCCCccc---------------------------ccCCCHHHHHHHHHHcCCCh
Confidence            999999999999887777666654322211111                           12467899999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++++|+||||..
T Consensus       274 ~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          274 KKRITADQALKVPWICN  290 (362)
T ss_dssp             GGSCCHHHHTTSHHHHT
T ss_pred             hhCcCHHHHhcCcccCC
Confidence            99999999999999965

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.96  E-value=6.1e-29  Score=218.49  Aligned_cols=170  Identities=30%  Similarity=0.487  Sum_probs=122.1

Q ss_pred             CCCCCCCCCcccCccccc------------cCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCC
Q psy7274           6 PHKRIGVEGALAHPYLEQ------------YYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT   73 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~------------~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~   73 (308)
                      .||||||+|||++.....            ...++.+||+|||+|+.....      ....+||+.|+|||++.+ ..++
T Consensus       140 vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~  212 (339)
T 1z57_A          140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH------HSTLVSTRHYRAPEVILA-LGWS  212 (339)
T ss_dssp             ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC------CCSSCSCGGGCCHHHHTT-SCCC
T ss_pred             cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc------cccccCCccccChHHhhC-CCCC
Confidence            699999999999821000            001678999999999875432      244589999999999875 5599


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHH--------------HHHHhhcCCCCCC
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEK--------------ARSYLQSLPFKPK  139 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~--------------~~~~~~~~~~~~~  139 (308)
                      .++||||+||+++||++|..||.+.+..+.+..+....+..+...+.......              ...+..... ...
T Consensus       213 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  291 (339)
T 1z57_A          213 QPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC-KPL  291 (339)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC-CCG
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcC-cch
Confidence            99999999999999999999999999999999998888877765544321100              000000000 000


Q ss_pred             CCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         140 VPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       140 ~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ..+.......++++.+||.+||+.||.+|||++|+++||||+..
T Consensus       292 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          292 KEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             GGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             hhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence            00001112235678999999999999999999999999999764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.96  E-value=6.7e-30  Score=221.59  Aligned_cols=156  Identities=19%  Similarity=0.175  Sum_probs=95.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCC-----CCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSK-----GYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiW   79 (308)
                      .||||||+||||+       .++.+||+|||+|+......... ......+||+.|+|||++.+..     .|+.++|||
T Consensus       130 iHRDlKp~NILl~-------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVw  202 (303)
T 3hmm_A          130 AHRDLKSKNILVK-------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             ECSCCCGGGEEEC-------TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             eeccCCcccEEEC-------CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhh
Confidence            5999999999999       89999999999998765432211 1234568999999999986432     267799999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          80 SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |+||++|||++|.++|........-. .......+....+.        .........+..+...........+.+|+.+
T Consensus       203 S~Gvvl~El~tg~~~~~~~~~~~~p~-~~~~~~~~~~~~~~--------~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~  273 (303)
T 3hmm_A          203 AMGLVFWEIARRCSIGGIHEDYQLPY-YDLVPSDPSVEEMR--------KVVCEQKLRPNIPNRWQSCEALRVMAKIMRE  273 (303)
T ss_dssp             HHHHHHHHHHHTBCBTTBCCCCCCTT-TTTSCSSCCHHHHH--------HHHTTSCCCCCCCGGGGSSHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHCCCCCCccccccccc-hhcccccchHHHHH--------HHHhcccCCCCCCccccchHHHHHHHHHHHH
Confidence            99999999999988774332100000 00000000111110        0011111111111111111223567899999


Q ss_pred             hcccCCCCCCCHHHHhcC
Q psy7274         160 MLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~h  177 (308)
                      ||+.||++|||+.|+++.
T Consensus       274 cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          274 CWYANGAARLTALRIKKT  291 (303)
T ss_dssp             TCCSSGGGSCCHHHHHHH
T ss_pred             HcccCHhHCcCHHHHHHH
Confidence            999999999999998753

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.96  E-value=3.7e-29  Score=223.41  Aligned_cols=141  Identities=29%  Similarity=0.390  Sum_probs=114.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||+..     +.++.+||+|||+|+.......    ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       209 vH~Dlkp~NIll~~-----~~~~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  278 (373)
T 2x4f_A          209 LHLDLKPENILCVN-----RDAKQIKIIDFGLARRYKPREK----LKVNFGTPEFLAPEVVNY-DFVSFPTDMWSVGVIA  278 (373)
T ss_dssp             ECCCCCGGGEEEEE-----TTTTEEEECCCSSCEECCTTCB----CCCCCSSCTTCCHHHHTT-CBCCHHHHHHHHHHHH
T ss_pred             ccccCCHHHEEEec-----CCCCcEEEEeCCCceecCCccc----cccccCCCcEeChhhccC-CCCCcHHhHHHHHHHH
Confidence            69999999999931     1667899999999997754321    344589999999999864 5689999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+..........                           .++.+++++.+||.+||+.||
T Consensus       279 ~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~L~~dp  331 (373)
T 2x4f_A          279 YMLLSGLSPFLGDNDAETLNNILACRWDLEDE---------------------------EFQDISEEAKEFISKLLIKEK  331 (373)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSG---------------------------GGTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhccCCCChh---------------------------hhccCCHHHHHHHHHHcCCCh
Confidence            99999999999998888877776543222111                           123568999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+|+||||+..
T Consensus       332 ~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          332 SWRISASEALKHPWLSDH  349 (373)
T ss_dssp             GGSCCHHHHHHSHHHHCH
T ss_pred             hhCCCHHHHhcCcCcCCC
Confidence            999999999999999763

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=6.4e-29  Score=215.09  Aligned_cols=137  Identities=24%  Similarity=0.365  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCC--CCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKG--YTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   .....+||+.|+|||++.+...  ++.++||||+||
T Consensus       159 vH~Dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~  228 (298)
T 2zv2_A          159 IHRDIKPSNLLVG-------EDGHIKIADFGVSNEFKGSDA---LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV  228 (298)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCTTCEECSSSSC---EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHH
T ss_pred             eccCCCHHHEEEC-------CCCCEEEecCCCccccccccc---cccCCcCCccccChhhhccCCCCCCCchhhhHhHHH
Confidence            6999999999999       889999999999987654321   1345689999999999864332  478899999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|+|++|+.||.+.........+.......                       +      ..+.+++++.+||.+||..
T Consensus       229 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------------~------~~~~~~~~l~~li~~~l~~  279 (298)
T 2zv2_A          229 TLYCFVFGQCPFMDERIMCLHSKIKSQALEF-----------------------P------DQPDIAEDLKDLITRMLDK  279 (298)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------C------SSSCCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCCCCCccHHHHHHHHhcccCCC-----------------------C------CccccCHHHHHHHHHHhhc
Confidence            9999999999998877655444433211000                       0      0135689999999999999


Q ss_pred             CCCCCCCHHHHhcCCccc
Q psy7274         164 NPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~  181 (308)
                      ||.+|||++|+++||||+
T Consensus       280 dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          280 NPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             CTTTSCCHHHHTTCHHHH
T ss_pred             ChhhCCCHHHHhcCcccc
Confidence            999999999999999995

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.96  E-value=1.7e-28  Score=217.08  Aligned_cols=169  Identities=27%  Similarity=0.439  Sum_probs=122.2

Q ss_pred             CCCCCCCCCcccCcccc------------ccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCC
Q psy7274           6 PHKRIGVEGALAHPYLE------------QYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT   73 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~------------~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~   73 (308)
                      .||||||+|||++....            ....++.+||+|||+|+.....      ....+||+.|+|||++.+ ..++
T Consensus       145 vH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~  217 (355)
T 2eu9_A          145 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH------HTTIVATRHYRPPEVILE-LGWA  217 (355)
T ss_dssp             ECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC------CCSSCSCGGGCCHHHHTT-CCCC
T ss_pred             ccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc------ccCCcCCCcccCCeeeec-CCCC
Confidence            69999999999941100            0026789999999999875432      244589999999999875 5599


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHH--------------HHHHh-hcCCCCC
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEK--------------ARSYL-QSLPFKP  138 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~--------------~~~~~-~~~~~~~  138 (308)
                      .++||||+||++|+|++|+.||.+.+..+.+..+....+.++...+.......              ...+. .....  
T Consensus       218 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  295 (355)
T 2eu9_A          218 QPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP--  295 (355)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCC--
T ss_pred             CccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCc--
Confidence            99999999999999999999999999999999999988887765543321100              00000 00000  


Q ss_pred             CCCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         139 KVPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       139 ~~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ...........+.++.+||.+||..||.+|||++|+++||||+..
T Consensus       296 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          296 LKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             GGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             ccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence            000000011224578999999999999999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=1.1e-28  Score=218.65  Aligned_cols=141  Identities=26%  Similarity=0.398  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    ....+.+||+|||+++.......   .....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       152 vHrDlkp~NIl~~~----~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  223 (351)
T 3c0i_A          152 IHRDVKPHCVLLAS----KENSAPVKLGGFGVAIQLGESGL---VAGGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVIL  223 (351)
T ss_dssp             ECSCCSGGGEEECS----SSTTCCEEECCCTTCEECCTTSC---BCCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             eeccCChHHeEEec----CCCCCcEEEecCcceeEecCCCe---eecCCcCCcCccCHHHHcC-CCCCchHhhHHHHHHH
Confidence            69999999999971    01234499999999987754321   1345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.. ...+..+........+..                           ++.++.++.+||.+||..||
T Consensus       224 ~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~---------------------------~~~~s~~~~~li~~~L~~dP  275 (351)
T 3c0i_A          224 FILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQ---------------------------WSHISESAKDLVRRMLMLDP  275 (351)
T ss_dssp             HHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHH---------------------------HTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccc---------------------------cccCCHHHHHHHHHHCCCCh
Confidence            99999999998753 333444433222222211                           13568999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||+.++|+||||+.
T Consensus       276 ~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          276 AERITVYEALNHPWLKE  292 (351)
T ss_dssp             TTSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHhcChhhcC
Confidence            99999999999999975

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=2.4e-28  Score=213.90  Aligned_cols=139  Identities=23%  Similarity=0.408  Sum_probs=112.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........   ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       163 vH~Dlkp~NIll~-------~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il  231 (321)
T 2c30_A          163 IHRDIKSDSILLT-------LDGRVKLSDFGFCAQISKDVPK---RKSLVGTPYWMAPEVISR-SLYATEVDIWSLGIMV  231 (321)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCCTTCEECCSSSCC---BCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEC-------CCCcEEEeeeeeeeecccCccc---cccccCCccccCHhhhcC-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999999876543221   345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+....+..+........                            .....+++.+.+||.+||+.||
T Consensus       232 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          232 IEMVDGEPPYFSDSPVQAMKRLRDSPPPKL----------------------------KNSHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHSSCCCC----------------------------TTGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHhcCCCCCc----------------------------CccccCCHHHHHHHHHHccCCh
Confidence            999999999998877666555543211000                            0012357899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||...
T Consensus       284 ~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          284 QERATAQELLDHPFLLQT  301 (321)
T ss_dssp             TTSCCHHHHHTSGGGGGC
T ss_pred             hhCcCHHHHhcChhhccC
Confidence            999999999999999764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.95  E-value=2.3e-28  Score=217.74  Aligned_cols=138  Identities=29%  Similarity=0.509  Sum_probs=113.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-----CCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-----KGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DiWS   80 (308)
                      .||||||+|||++       .++.+||+|||++........    ....+||+.|+|||++.+.     ..++.++||||
T Consensus       222 ~H~Dlkp~NIl~~-------~~~~ikl~DfG~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~s  290 (365)
T 2y7j_A          222 VHRDLKPENILLD-------DNMQIRLSDFGFSCHLEPGEK----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA  290 (365)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCTTCEECCTTCC----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHH
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEEecCcccccCCCcc----cccCCCCCCccChhhccccccccCcCCCchhhHHh
Confidence            6999999999999       889999999999987754322    3456899999999998632     34889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||++|+|++|..||.+.+....+..+......+....+                           ...+..+.+||.+|
T Consensus       291 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~  343 (365)
T 2y7j_A          291 CGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW---------------------------DDRSSTVKDLISRL  343 (365)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHH---------------------------SSSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCccc---------------------------ccCCHHHHHHHHHH
Confidence            999999999999999988877776666543322222111                           24578999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLE  181 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~  181 (308)
                      |..||.+|||++++++||||+
T Consensus       344 L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          344 LQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             SCSSTTTSCCHHHHHHSGGGC
T ss_pred             cCCChhHCcCHHHHhcCcccC
Confidence            999999999999999999996

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.95  E-value=4.2e-29  Score=219.82  Aligned_cols=136  Identities=23%  Similarity=0.403  Sum_probs=106.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......    .....+||+.|+|||++.+...++.++||||+||+
T Consensus       129 ivH~Dlkp~NIll~-------~~~~~kl~DFG~s~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  197 (336)
T 3h4j_B          129 IVHRDLKPENLLLD-------DNLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIV  197 (336)
T ss_dssp             CCCCCCSTTTEEEC-------TTCCEEECCSSCTBTTTTSB----TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHH
T ss_pred             eEecCCchhhEEEc-------CCCCEEEEEeccceeccCCc----ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHH
Confidence            36999999999999       88999999999998765332    23556899999999998654434789999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.........+                               ...........++++.+||.+||..|
T Consensus       198 l~~ll~g~~Pf~~~~~~~~~~~i-------------------------------~~~~~~~p~~~s~~~~~li~~~L~~d  246 (336)
T 3h4j_B          198 LYVMLVGRLPFDDEFIPNLFKKV-------------------------------NSCVYVMPDFLSPGAQSLIRRMIVAD  246 (336)
T ss_dssp             HHHHHHSSCSSBCSSSTTCBCCC-------------------------------CSSCCCCCTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHhCCCCCCCccHHHHHHHH-------------------------------HcCCCCCcccCCHHHHHHHHHHcCCC
Confidence            99999999999765421110000                               00011122357899999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||++|+++||||+.
T Consensus       247 P~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          247 PMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             GGGSCCHHHHTTCHHHHT
T ss_pred             hhHCcCHHHHHhChhhcc
Confidence            999999999999999965

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.95  E-value=1e-28  Score=216.70  Aligned_cols=142  Identities=27%  Similarity=0.415  Sum_probs=111.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    ...++.+||+|||+|+.......    ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       153 vH~Dikp~NIl~~~----~~~~~~~kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  223 (327)
T 3lm5_A          153 VHLDLKPQNILLSS----IYPLGDIKIVDFGMSRKIGHACE----LREIMGTPEYLAPEILNY-DPITTATDMWNIGIIA  223 (327)
T ss_dssp             ECSCCCGGGEEESC----BTTBCCEEECCGGGCEEC-------------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             ecCcCChHHEEEec----CCCCCcEEEeeCccccccCCccc----cccccCCcCccCCeeecC-CCCCchhhHHHHHHHH
Confidence            69999999999981    01268999999999987654321    344689999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+.+..+..........                           .+..++..+.+||.+||+.||
T Consensus       224 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~L~~dP  276 (327)
T 3lm5_A          224 YMLLTHTSPFVGEDNQETYLNISQVNVDYSEE---------------------------TFSSVSQLATDFIQSLLVKNP  276 (327)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT---------------------------TTTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHhCCCCCCCCCchHHHHHHHhcccccCch---------------------------hhcccCHHHHHHHHHHcCCCh
Confidence            99999999999988877777665543322221                           123568899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++|+||||+.+
T Consensus       277 ~~Rpt~~~ll~h~~~~~~  294 (327)
T 3lm5_A          277 EKRPTAEICLSHSWLQQW  294 (327)
T ss_dssp             GGSCCHHHHTTCGGGCCC
T ss_pred             hhCcCHHHHhCCHhhccc
Confidence            999999999999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.95  E-value=1.3e-28  Score=225.89  Aligned_cols=136  Identities=26%  Similarity=0.404  Sum_probs=112.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......    .....+||+.|+|||++.+...++.++||||+||++
T Consensus       138 vHrDLkp~NIll~-------~~~~vkL~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil  206 (476)
T 2y94_A          138 VHRDLKPENVLLD-------AHMNAKIADFGLSNMMSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVIL  206 (476)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCSSCEECCTTC----CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHH
T ss_pred             CcccccHHHEEEe-------cCCCeEEEeccchhhccccc----cccccCCCcCeEChhhccCCCCCCCcceehhhHHHH
Confidence            6999999999999       88999999999998765432    245668999999999987655457899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+....+..+......                               ....+++++.+||.+||+.||
T Consensus       207 ~elltG~~Pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~Li~~~L~~dP  255 (476)
T 2y94_A          207 YALLCGTLPFDDDHVPTLFKKICDGIFY-------------------------------TPQYLNPSVISLLKHMLQVDP  255 (476)
T ss_dssp             HHHHHSSCSSCCSSSHHHHHHHHTTCCC-------------------------------CCTTCCHHHHHHHHHHTCSST
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHhcCCcC-------------------------------CCccCCHHHHHHHHHHcCCCc
Confidence            9999999999988776666555432110                               112467899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||+..
T Consensus       256 ~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          256 MKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             TTSCCHHHHHTCHHHHTT
T ss_pred             hhCcCHHHHHhCHHhhhc
Confidence            999999999999999764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.95  E-value=4.3e-28  Score=216.81  Aligned_cols=136  Identities=23%  Similarity=0.394  Sum_probs=107.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .+|.+||+|||+|+......    .....+||+.|+|||++.+  +..|+.++||||+||
T Consensus       137 vHrDlkp~NIll~-------~~g~vkL~DFG~a~~~~~~~----~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~  205 (384)
T 4fr4_A          137 IHRDMKPDNILLD-------EHGHVHITDFNIAAMLPRET----QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGV  205 (384)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECCTTC----CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHH
T ss_pred             eeccCcHHHeEEC-------CCCCEEEeccceeeeccCCC----ceeccCCCccccCCeeeccCCCCCCCccceeechHH
Confidence            6999999999999       89999999999998765432    2456799999999999864  245899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHH---HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          84 ILAEMISNRPIFPGKHYL---DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~---~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      ++|+|++|+.||.+.+..   .....+....                               ......++..+.+||.+|
T Consensus       206 il~elltG~~Pf~~~~~~~~~~~~~~~~~~~-------------------------------~~~p~~~s~~~~~li~~l  254 (384)
T 4fr4_A          206 TAYELLRGRRPYHIRSSTSSKEIVHTFETTV-------------------------------VTYPSAWSQEMVSLLKKL  254 (384)
T ss_dssp             HHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-------------------------------CCCCTTSCHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-------------------------------cCCCCcCCHHHHHHHHHH
Confidence            999999999999764422   2222211100                               011234689999999999


Q ss_pred             cccCCCCCCC-HHHHhcCCccccc
Q psy7274         161 LTFNPHKRIG-VEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t-~~eil~hp~f~~~  183 (308)
                      |..||.+|++ ++++++||||+.+
T Consensus       255 L~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          255 LEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             SCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             hcCCHhHhcccHHHHHcChhhhcC
Confidence            9999999998 8999999999763

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=1.1e-28  Score=216.08  Aligned_cols=142  Identities=25%  Similarity=0.307  Sum_probs=108.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+....... .......+||+.|+|||++.+...++.++||||+||++
T Consensus       127 vH~Dlkp~NIll~-------~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  198 (323)
T 3tki_A          127 THRDIKPENLLLD-------ERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL  198 (323)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCTTCEECEETTE-ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHH
T ss_pred             cccccchHHEEEe-------CCCCEEEEEeeccceeccCCc-ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHH
Confidence            6999999999999       889999999999986543221 12235678999999999997655457899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+...............                            ...+..++..+.+||.+||..||
T Consensus       199 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~L~~dP  250 (323)
T 3tki_A          199 TAMLAGELPWDQPSDSCQEYSDWKEKKTY----------------------------LNPWKKIDSAPLALLHKILVENP  250 (323)
T ss_dssp             HHHHHSSCSCSSSCTTSHHHHHHHTTCTT----------------------------STTGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCCCchHHHHHHHHhccccc----------------------------CCccccCCHHHHHHHHHHccCCh
Confidence            99999999998765432211111100000                            00012467899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+++||||+..
T Consensus       251 ~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          251 SARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             TTSCCHHHHTTCTTTTCC
T ss_pred             hhCcCHHHHhhChhhccc
Confidence            999999999999999764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.95  E-value=2e-28  Score=226.19  Aligned_cols=146  Identities=29%  Similarity=0.490  Sum_probs=115.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.    .+.++.+||+|||+|+.......    ....+||+.|+|||++.+  .|+.++||||+||+
T Consensus       142 ivH~Dlkp~Nil~~~----~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~i  211 (486)
T 3mwu_A          142 IVHRDLKPENILLES----KEKDCDIKIIDFGLSTCFQQNTK----MKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVI  211 (486)
T ss_dssp             CCCSCCSGGGEEESS----SSTTCCEEECSCSCTTTBCCC--------CCTTGGGGCCGGGGGS--CCCHHHHHHHHHHH
T ss_pred             eEeccCchHHEEEec----CCCCCCEEEEECCcCeECCCCCc----cCCCcCCCCCCCHHHhCC--CCCchhhHHHHHHH
Confidence            379999999999961    11457899999999987654322    355689999999999864  39999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|.+||.+.+..+.+..+...........                           +..+++++++||.+||+.|
T Consensus       212 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~s~~~~~li~~~L~~d  264 (486)
T 3mwu_A          212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ---------------------------WRTISDDAKDLIRKMLTFH  264 (486)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGG---------------------------GGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcc---------------------------cCCCCHHHHHHHHHHcCCC
Confidence            9999999999999988887777765322221111                           1246899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      |.+|||+.++|+||||+......
T Consensus       265 p~~R~t~~~~l~hp~~~~~~~~~  287 (486)
T 3mwu_A          265 PSLRITATQCLEHPWIQKYSSET  287 (486)
T ss_dssp             TTTSCCHHHHHHCHHHHHTCCCC
T ss_pred             hhhCcCHHHHhcCHhhccCcccC
Confidence            99999999999999998865544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.95  E-value=5.1e-29  Score=224.48  Aligned_cols=143  Identities=25%  Similarity=0.373  Sum_probs=101.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    ...++.+||+|||+|+......    ..+..+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       183 vHrDlkp~Nill~~----~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  253 (400)
T 1nxk_A          183 AHRDVKPENLLYTS----KRPNAILKLTDFGFAKETTSHN----SLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIM  253 (400)
T ss_dssp             ECCCCCGGGEEESS----SSTTCCEEECCCTTCEECC---------------CTTCCGGGSCC-CCSSSHHHHHHHHHHH
T ss_pred             cccCcCcceEEEec----CCCCccEEEEecccccccCCCC----ccccCCCCCCccCHhhcCC-CCCCCcccHHHHHHHH
Confidence            69999999999981    0117899999999998764322    1356789999999998754 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHH----HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          86 AEMISNRPIFPGKHYLD----QLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~----~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |+|++|+.||.+.+...    ....+....                      . ..+.    ..+..++.++.+||.+||
T Consensus       254 ~ell~g~~pf~~~~~~~~~~~~~~~i~~~~----------------------~-~~~~----~~~~~~s~~~~~li~~~L  306 (400)
T 1nxk_A          254 YILLCGYPPFYSNHGLAISPGMKTRIRMGQ----------------------Y-EFPN----PEWSEVSEEVKMLIRNLL  306 (400)
T ss_dssp             HHHHHSSCSCCCCTTCSSCCSHHHHHHHTC----------------------C-CCCT----TTTTTSCHHHHHHHHTTS
T ss_pred             HHHHhCCCCCCCCccccccHHHHHHHHcCc----------------------c-cCCC----cccccCCHHHHHHHHHHC
Confidence            99999999997754321    111111100                      0 0000    112457899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~~  184 (308)
                      +.||.+|||++++++||||....
T Consensus       307 ~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          307 KTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             CSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CCChhHCcCHHHHhcCccccCCC
Confidence            99999999999999999997643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.95  E-value=1.7e-28  Score=220.01  Aligned_cols=143  Identities=27%  Similarity=0.413  Sum_probs=114.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.     +..+.+||+|||+|+......    .....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       171 vHrDlkp~NIll~~-----~~~~~vkL~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il  240 (387)
T 1kob_A          171 VHLDIKPENIMCET-----KKASSVKIIDFGLATKLNPDE----IVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLG  240 (387)
T ss_dssp             ECCCCCGGGEEESS-----TTCCCEEECCCTTCEECCTTS----CEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHH
T ss_pred             eecccchHHeEEec-----CCCCceEEEecccceecCCCc----ceeeeccCCCccCchhccC-CCCCCcccEeeHhHHH
Confidence            69999999999971     134789999999999765432    1344589999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|..||.+.+..+.+..+........                           ...+..+++++.+||.+||..||
T Consensus       241 ~elltg~~Pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~L~~dP  293 (387)
T 1kob_A          241 YVLLSGLSPFAGEDDLETLQNVKRCDWEFD---------------------------EDAFSSVSPEAKDFIKNLLQKEP  293 (387)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHHHCCCCCC---------------------------SSTTTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---------------------------ccccccCCHHHHHHHHHHcCCCh
Confidence            999999999999887777666543211111                           11234578999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccC
Q psy7274         166 HKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~  185 (308)
                      .+|||++++|+||||+....
T Consensus       294 ~~Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          294 RKRLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             GGSCCHHHHHTSTTTSSCCT
T ss_pred             hHCcCHHHHhhCccccCCcc
Confidence            99999999999999987533

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=7.3e-29  Score=222.76  Aligned_cols=175  Identities=18%  Similarity=0.161  Sum_probs=108.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC----CCCCccCcccccccchhhHhhCC-CCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD----HTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWS   80 (308)
                      .||||||+|||++       .++.+||+|||++........    ........+||..|+|||++.+. ..++.++||||
T Consensus       150 vHrDlkp~NIll~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws  222 (389)
T 3gni_B          150 VHRSVKASHILIS-------VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS  222 (389)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHH
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHH
Confidence            6999999999999       899999999999875422110    11122345899999999998753 46899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhC--------CCChhhHhhh----hhHHHHHH---hhcCCCCCCCCcccc
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILG--------SPTPEDLSCI----INEKARSY---LQSLPFKPKVPWEIL  145 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~--------~p~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~  145 (308)
                      +||++|+|++|+.||.+.+....+..+.....        .+........    ........   ....+.....+....
T Consensus       223 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (389)
T 3gni_B          223 VGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPY  302 (389)
T ss_dssp             HHHHHHHHHHSSCTTTTCCSTTHHHHC-----------------------------------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcc
Confidence            99999999999999988766555444332110        0000000000    00000000   000000111111223


Q ss_pred             CCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccccCCC
Q psy7274         146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       146 ~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      ...+++++.+||.+||+.||.+|||++|+|+||||+.+....
T Consensus       303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  344 (389)
T 3gni_B          303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRA  344 (389)
T ss_dssp             ---CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---C
T ss_pred             ccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhcc
Confidence            456789999999999999999999999999999998865443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=2.2e-28  Score=218.10  Aligned_cols=170  Identities=26%  Similarity=0.398  Sum_probs=118.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.. ...+..+.+||+|||+|+.....      .+..+||..|+|||++.+ ..++.++||||+||+
T Consensus       153 ivH~Dikp~NIll~~~-~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~i  224 (373)
T 1q8y_A          153 IIHTDIKPENVLMEIV-DSPENLIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLG-APWGCGADIWSTACL  224 (373)
T ss_dssp             EECSCCSGGGEEEEEE-ETTTTEEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHH
T ss_pred             EEecCCChHHeEEecc-CCCcCcceEEEcccccccccCCC------CCCCCCCccccCcHHHhC-CCCCchHhHHHHHHH
Confidence            3699999999999511 00014457999999999876432      244589999999999875 458999999999999


Q ss_pred             HHHHhhCCCCCCCCC------HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCC------Ccc-------cc
Q psy7274          85 LAEMISNRPIFPGKH------YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV------PWE-------IL  145 (308)
Q Consensus        85 l~ell~g~~pf~~~~------~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------~~  145 (308)
                      +|+|++|+.||.+.+      ..+.+..+...+|.++...+.....  ...+..........      +..       .+
T Consensus       225 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (373)
T 1q8y_A          225 IFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY--TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF  302 (373)
T ss_dssp             HHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTT--HHHHBCC--CBSSCCCCCBCCHHHHHHHTTCC
T ss_pred             HHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccch--hhhhcCCcchhcccccccccchhhhhhhcccC
Confidence            999999999998754      5677888888899887765442211  11111111000000      000       01


Q ss_pred             CCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCcccccc
Q psy7274         146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       146 ~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~  184 (308)
                      ....+.++.+||.+||+.||.+|||++|+|+||||+...
T Consensus       303 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          303 SKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             CHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             CcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            123457889999999999999999999999999998753

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.95  E-value=1e-28  Score=216.52  Aligned_cols=147  Identities=29%  Similarity=0.446  Sum_probs=91.8

Q ss_pred             CCCCCCCCCcccCccccccCCCC---CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA---DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~---~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      .||||||+|||++       .++   .+||+|||+|+.......   .....+||..|+|||++.+ ..++.++||||+|
T Consensus       128 vH~Dlkp~NIll~-------~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG  196 (325)
T 3kn6_A          128 VHRDLKPENLLFT-------DENDNLEIKIIDFGFARLKPPDNQ---PLKTPCFTLHYAAPELLNQ-NGYDESCDLWSLG  196 (325)
T ss_dssp             ECCCCCGGGEEEE-------C----CEEEECCCTTCEECCC--------------------------CCCCHHHHHHHHH
T ss_pred             eecCCCHHHEEEe-------cCCCcccEEEeccccceecCCCCC---cccccCCCcCccCHHHhcC-CCCCCccchHHHH
Confidence            6999999999997       443   799999999987654321   1355689999999999864 5699999999999


Q ss_pred             HHHHHHhhCCCCCCCCCH-------HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          83 CILAEMISNRPIFPGKHY-------LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~-------~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      |++++|++|+.||.+.+.       .+.+..+..........                           .+..+++++.+
T Consensus       197 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~s~~~~~  249 (325)
T 3kn6_A          197 VILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE---------------------------AWKNVSQEAKD  249 (325)
T ss_dssp             HHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSH---------------------------HHHTSCHHHHH
T ss_pred             HHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcc---------------------------cccCCCHHHHH
Confidence            999999999999987543       22222222111111111                           11246899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCCccccccCCCCCC
Q psy7274         156 LLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP  190 (308)
Q Consensus       156 ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~~~~  190 (308)
                      ||.+||..||.+|||++++++||||+........+
T Consensus       250 li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~  284 (325)
T 3kn6_A          250 LIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP  284 (325)
T ss_dssp             HHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSC
T ss_pred             HHHHHCCCChhHCCCHHHHhcChhhccCccCCCCC
Confidence            99999999999999999999999998754443333

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.95  E-value=5.3e-28  Score=211.59  Aligned_cols=138  Identities=25%  Similarity=0.384  Sum_probs=113.4

Q ss_pred             CCCCCCCCCcccCccccccCCCC----CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA----DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~----~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++    .+||+|||+++.......    ....+||+.|+|||++.+ ..++.++||||+
T Consensus       137 vH~dikp~NIl~~-------~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Di~sl  204 (321)
T 2a2a_A          137 AHFDLKPENIMLL-------DKNIPIPHIKLIDFGLAHEIEDGVE----FKNIFGTPEFVAPEIVNY-EPLGLEADMWSI  204 (321)
T ss_dssp             ECCCCSGGGEEES-------CTTSSSCCEEECCCTTCEECCTTCC----CCCCCSCGGGCCHHHHTT-CCCCTHHHHHHH
T ss_pred             ecCCCChHHEEEe-------cCCCCcCCEEEccCccceecCcccc----ccccCCCCCccCcccccC-CCCCCccccHHH
Confidence            6999999999998       555    799999999987654322    345689999999999864 558999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|..||.+.+..+.+..+........+..                           ++..+..+.+||.+||
T Consensus       205 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l  257 (321)
T 2a2a_A          205 GVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF---------------------------FSHTSELAKDFIRKLL  257 (321)
T ss_dssp             HHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHH---------------------------HTTCCHHHHHHHHTTS
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhh---------------------------hcccCHHHHHHHHHHc
Confidence            9999999999999999888777766654332222211                           1356789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ..||.+|||++++++||||+.
T Consensus       258 ~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          258 VKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             CSSTTTSCCHHHHHHSTTTSC
T ss_pred             CCChhhCcCHHHHhcCccccC
Confidence            999999999999999999975

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=6.7e-28  Score=223.91  Aligned_cols=136  Identities=25%  Similarity=0.390  Sum_probs=108.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+........   ....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       311 vHrDLKP~NILl~-------~~g~vkL~DFGla~~~~~~~~~---~~~~~GT~~Y~APE~l~~-~~~~~~~DiwSlGvil  379 (543)
T 3c4z_A          311 IYRDLKPENVLLD-------DDGNVRISDLGLAVELKAGQTK---TKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTL  379 (543)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCTTCEECCTTCCC---BCCCCSCTTTSCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             cccCCChHHEEEe-------CCCCEEEeecceeeeccCCCcc---cccccCCccccChhhhcC-CCCChHHhcCcchHHH
Confidence            6999999999999       8999999999999876543221   345699999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCH----HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          86 AEMISNRPIFPGKHY----LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        86 ~ell~g~~pf~~~~~----~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |||++|++||.+.+.    ......+....                               ..+.+.+++.+.+||.+||
T Consensus       380 yelltG~~PF~~~~~~~~~~~~~~~i~~~~-------------------------------~~~p~~~s~~~~~li~~lL  428 (543)
T 3c4z_A          380 YEMIAARGPFRARGEKVENKELKQRVLEQA-------------------------------VTYPDKFSPASKDFCEALL  428 (543)
T ss_dssp             HHHHHSSCSSCCTTCCCCHHHHHHHHHHCC-------------------------------CCCCTTSCHHHHHHHHHHS
T ss_pred             HHHHhCCCCCCCCccchhHHHHHHHHhhcc-------------------------------cCCCcccCHHHHHHHHHhc
Confidence            999999999987642    22222222110                               0112356899999999999


Q ss_pred             ccCCCCCCC-----HHHHhcCCccccc
Q psy7274         162 TFNPHKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t-----~~eil~hp~f~~~  183 (308)
                      +.||.+|++     ++++++||||+.+
T Consensus       429 ~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          429 QKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             CSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             cCCHhHCCCCcccCHHHHHcCccccCC
Confidence            999999996     5899999999763

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=2.7e-28  Score=215.37  Aligned_cols=145  Identities=26%  Similarity=0.400  Sum_probs=111.4

Q ss_pred             CCCCCCCCCcccCccccccCCCC--CceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCC-CCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA--DEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~--~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++  .+||+|||+|+........ .......+||+.|+|||++.+. ..++.++||||+
T Consensus       190 vH~Dlkp~NIll~-------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          190 CHRDIKPENFLFS-------TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             ECCCCCGGGEEES-------CSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             cccCCChhhEEEe-------cCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            6999999999997       454  8999999999865332111 1113556899999999998642 458999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|+.||.+.+..+.+..+...........                           ...+++.+.+||.+||
T Consensus       263 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l  315 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN---------------------------YNVLSPLARDLLSNLL  315 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGG---------------------------GGGSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcc---------------------------cccCCHHHHHHHHHHc
Confidence            9999999999999999888777776654322111111                           1235789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~~  184 (308)
                      ..||.+|||+.++++||||+.+.
T Consensus       316 ~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          316 NRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             CSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             CCChhHCCCHHHHhcChhhccCh
Confidence            99999999999999999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=9.4e-29  Score=228.22  Aligned_cols=144  Identities=29%  Similarity=0.474  Sum_probs=116.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.    .+.++.+||+|||+|+.......    ....+||+.|+|||++.+  .|+.++||||+||+
T Consensus       147 ivH~Dlkp~Nil~~~----~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~i  216 (484)
T 3nyv_A          147 IVHRDLKPENLLLES----KSKDANIRIIDFGLSTHFEASKK----MKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVI  216 (484)
T ss_dssp             CCCSCCCGGGEEESS----SSTTCCEEECCTTHHHHBCCCCS----HHHHTTGGGTCCHHHHHT--CCCTHHHHHHHHHH
T ss_pred             eeeCCCCHHHEEEec----CCCCCcEEEEeeeeeEEcccccc----cccCCCCccccCceeecC--CCCCcceeHHHHHH
Confidence            379999999999941    11578999999999987754321    355689999999999864  49999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|.+||.+.+..+.+..+...........                           +..+++++.+||.+||+.|
T Consensus       217 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~s~~~~~li~~~L~~d  269 (484)
T 3nyv_A          217 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ---------------------------WKKVSESAKDLIRKMLTYV  269 (484)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGG---------------------------GGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcc---------------------------cccCCHHHHHHHHHHCCCC
Confidence            9999999999999998887777765332221111                           1246899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~  185 (308)
                      |.+|||++++|+||||+....
T Consensus       270 p~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          270 PSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             GGGSCCHHHHHTSHHHHHHTC
T ss_pred             hhHCcCHHHHhhChhhccccc
Confidence            999999999999999987643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.95  E-value=2.4e-28  Score=226.07  Aligned_cols=141  Identities=29%  Similarity=0.509  Sum_probs=114.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    .+.++.+||+|||+|+.......    ....+||+.|+|||++.  ..|+.++||||+||++
T Consensus       158 vH~Dlkp~Nil~~~----~~~~~~~kl~DfG~a~~~~~~~~----~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il  227 (494)
T 3lij_A          158 VHRDLKPENLLLES----KEKDALIKIVDFGLSAVFENQKK----MKERLGTAYYIAPEVLR--KKYDEKCDVWSIGVIL  227 (494)
T ss_dssp             ECSCCSGGGEEESC----SSTTCCEEECCCTTCEECBTTBC----BCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHH
T ss_pred             eeccCChhhEEEeC----CCCCCcEEEEECCCCeECCCCcc----ccccCCCcCeeCHHHHc--ccCCCchhHHHHHHHH
Confidence            69999999999971    11346699999999987654321    35568999999999874  3499999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|.+||.+.+..+.+..+...........                           +..+++.+.+||.+||+.||
T Consensus       228 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~s~~~~~li~~~L~~dp  280 (494)
T 3lij_A          228 FILLAGYPPFGGQTDQEILRKVEKGKYTFDSPE---------------------------WKNVSEGAKDLIKQMLQFDS  280 (494)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGG---------------------------GTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchh---------------------------cccCCHHHHHHHHHHCCCCh
Confidence            999999999999988887777765433222211                           23568999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++|+||||+..
T Consensus       281 ~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          281 QRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             TTSCCHHHHHTCHHHHHH
T ss_pred             hhCccHHHHhcCcccccC
Confidence            999999999999999764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=4.6e-28  Score=207.39  Aligned_cols=141  Identities=25%  Similarity=0.365  Sum_probs=114.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||+..    .+.++.+||+|||++........    ....+||+.|+|||++.+ . ++.++||||+||++
T Consensus       128 ~H~dlkp~Nil~~~----~~~~~~~~l~Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~-~-~~~~~Di~slG~~l  197 (277)
T 3f3z_A          128 AHRDLKPENFLFLT----DSPDSPLKLIDFGLAARFKPGKM----MRTKVGTPYYVSPQVLEG-L-YGPECDEWSAGVMM  197 (277)
T ss_dssp             ECCCCSGGGEEESS----SSTTCCEEECCCTTCEECCTTSC----BCCCCSCTTTCCHHHHTT-C-BCTTHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEec----CCCCCcEEEEecccceeccCccc----hhccCCCCCccChHHhcc-c-CCchhhehhHHHHH
Confidence            69999999999920    01788999999999987654322    345689999999998753 3 89999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+..+....+.......+...+                           ..+++.+.+||.+||+.||
T Consensus       198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~dp  250 (277)
T 3f3z_A          198 YVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDW---------------------------LNVSPQAESLIRRLLTKSP  250 (277)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH---------------------------TTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhh---------------------------hcCCHHHHHHHHHHccCCh
Confidence            9999999999998887777776654433333222                           2467899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||+.++++||||+..
T Consensus       251 ~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          251 KQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             TTSCCHHHHTTSHHHHHH
T ss_pred             hhCcCHHHHhcCHHHhcc
Confidence            999999999999999764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=1.9e-28  Score=213.50  Aligned_cols=132  Identities=22%  Similarity=0.260  Sum_probs=101.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......    ....+||..|+|||++.+  .++.++||||+||++
T Consensus       179 vH~Dikp~NIll~-------~~~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il  245 (311)
T 3p1a_A          179 VHLDVKPANIFLG-------PRGRCKLGDFGLLVELGTAGA----GEVQEGDPRYMAPELLQG--SYGTAADVFSLGLTI  245 (311)
T ss_dssp             ECCCCSGGGEEEC-------GGGCEEECCCTTCEECC----------CCCCCGGGCCGGGGGT--CCSTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEccceeeeecccCCC----CcccCCCccccCHhHhcC--CCCchhhHHHHHHHH
Confidence            6999999999999       889999999999987654321    244579999999998864  489999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +||++|..++.+.....   .+..  +..++                           .....+++++.+||.+||+.||
T Consensus       246 ~el~~g~~~~~~~~~~~---~~~~--~~~~~---------------------------~~~~~~~~~l~~li~~~L~~dP  293 (311)
T 3p1a_A          246 LEVACNMELPHGGEGWQ---QLRQ--GYLPP---------------------------EFTAGLSSELRSVLVMMLEPDP  293 (311)
T ss_dssp             HHHHHTCCCCSSHHHHH---HHTT--TCCCH---------------------------HHHTTSCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCCccHHH---HHhc--cCCCc---------------------------ccccCCCHHHHHHHHHHcCCCh
Confidence            99999987775543221   1111  11111                           1123568999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++++++||||++
T Consensus       294 ~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          294 KLRATAEALLALPVLRQ  310 (311)
T ss_dssp             TTSCCHHHHHTSGGGSC
T ss_pred             hhCcCHHHHHhCccccC
Confidence            99999999999999964

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.95  E-value=3.9e-28  Score=214.96  Aligned_cols=145  Identities=26%  Similarity=0.351  Sum_probs=101.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.    .+.++.+||+|||+++......    .....+||+.|+|||++.+ ..++.++||||+||+
T Consensus       169 ivH~Dikp~NIll~~----~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  239 (349)
T 2w4o_A          169 IVHRDLKPENLLYAT----PAPDAPLKIADFGLSKIVEHQV----LMKTVCGTPGYCAPEILRG-CAYGPEVDMWSVGII  239 (349)
T ss_dssp             CCCCCCCGGGEEESS----SSTTCCEEECCCC--------------------CGGGSCHHHHTT-CCCCTHHHHHHHHHH
T ss_pred             eEecCCCcccEEEec----CCCCCCEEEccCccccccCccc----ccccccCCCCccCHHHhcC-CCCCcccchHHHHHH
Confidence            379999999999971    1137899999999998764321    1345689999999999865 459999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHH-HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLD-QLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|+|++|..||.+..... .+..+.......                           ....++.++.++.+||.+||..
T Consensus       240 l~ell~g~~pf~~~~~~~~~~~~i~~~~~~~---------------------------~~~~~~~~~~~~~~li~~~L~~  292 (349)
T 2w4o_A          240 TYILLCGFEPFYDERGDQFMFRRILNCEYYF---------------------------ISPWWDEVSLNAKDLVRKLIVL  292 (349)
T ss_dssp             HHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC---------------------------CTTTTTTSCHHHHHHHHTTSCS
T ss_pred             HHHHHhCCCCCCCCcccHHHHHHHHhCCCcc---------------------------CCchhhhCCHHHHHHHHHHccC
Confidence            999999999997765443 333332211100                           0112345789999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccC
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~  185 (308)
                      ||.+|||++++|+||||.....
T Consensus       293 dP~~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          293 DPKKRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             SGGGSCCHHHHHHSTTTTSTTC
T ss_pred             ChhhCcCHHHHhcCcccCCCcc
Confidence            9999999999999999986533

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.95  E-value=5.6e-28  Score=224.11  Aligned_cols=141  Identities=28%  Similarity=0.449  Sum_probs=116.7

Q ss_pred             CCCCCCCCCcccCccccccCCCC---CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA---DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~---~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      .||||||+|||++       .++   .+||+|||+|+.......    ....+||+.|+|||++.  ..++.++||||+|
T Consensus       168 vH~Dlkp~Nil~~-------~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG  234 (504)
T 3q5i_A          168 VHRDIKPENILLE-------NKNSLLNIKIVDFGLSSFFSKDYK----LRDRLGTAYYIAPEVLK--KKYNEKCDVWSCG  234 (504)
T ss_dssp             ECSCCSGGGEEES-------STTCCSSEEECCCTTCEECCTTSC----BCCCCSCTTTCCHHHHT--TCBCTHHHHHHHH
T ss_pred             EeCCCcHHHEEEe-------cCCCCccEEEEECCCCEEcCCCCc----cccccCCcCCCCHHHhc--cCCCchHHHHHHH
Confidence            6999999999998       443   699999999987754322    35568999999999975  3499999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++|+|++|.+||.+.+..+.+..+...........+                           +.+++++++||.+||+
T Consensus       235 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~---------------------------~~~s~~~~~li~~~L~  287 (504)
T 3q5i_A          235 VIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW---------------------------KNISDEAKELIKLMLT  287 (504)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH---------------------------TTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc---------------------------CCCCHHHHHHHHHHcC
Confidence            9999999999999999988888777654333322222                           3568999999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccCC
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .||.+|||++|+|+||||+.....
T Consensus       288 ~dp~~R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          288 YDYNKRCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             SSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred             CChhHCCCHHHHhcCHhhhhchhc
Confidence            999999999999999999886554

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=3.6e-28  Score=226.49  Aligned_cols=134  Identities=28%  Similarity=0.440  Sum_probs=107.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+.......    ....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       308 vHrDLKPeNILld-------~~g~vKL~DFGla~~~~~~~~----~~~~~GT~~Y~APEvl~~-~~~~~~~DiwSLGvil  375 (576)
T 2acx_A          308 VYRDLKPENILLD-------DHGHIRISDLGLAVHVPEGQT----IKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLL  375 (576)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCTTCEECCTTCC----EECCCSCGGGCCHHHHTT-CEESSHHHHHHHHHHH
T ss_pred             eccCCchheEEEe-------CCCCeEEEecccceecccCcc----ccccCCCccccCHHHHcC-CCCCccchHHHHHHHH
Confidence            6999999999999       899999999999987654321    345699999999999865 5599999999999999


Q ss_pred             HHHhhCCCCCCCCCH----HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          86 AEMISNRPIFPGKHY----LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        86 ~ell~g~~pf~~~~~----~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |||++|+.||.+.+.    ......+...                        +       ..+...+++++.+||.+||
T Consensus       376 yeLltG~~PF~~~~~~~~~~~i~~~i~~~------------------------~-------~~~p~~~s~~~~dLI~~lL  424 (576)
T 2acx_A          376 YEMIAGQSPFQQRKKKIKREEVERLVKEV------------------------P-------EEYSERFSPQARSLCSQLL  424 (576)
T ss_dssp             HHHHHSSCSSSCSSSCCCHHHHHHHHHHC------------------------C-------CCCCTTSCHHHHHHHHHHT
T ss_pred             HHHHhCCCCCcccccchhHHHHHHHhhcc------------------------c-------ccCCccCCHHHHHHHHHhc
Confidence            999999999987642    1222222110                        0       0112357899999999999


Q ss_pred             ccCCCCCC-----CHHHHhcCCcccc
Q psy7274         162 TFNPHKRI-----GVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~-----t~~eil~hp~f~~  182 (308)
                      +.||.+|+     +++|+++||||+.
T Consensus       425 ~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          425 CKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             CSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             cCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            99999999     7899999999976

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=1.9e-28  Score=210.95  Aligned_cols=142  Identities=21%  Similarity=0.327  Sum_probs=100.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHh---hCCCCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIM---LNSKGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~~~~~~DiWSl   81 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......    .....||..|+|||++   .....++.++||||+
T Consensus       131 i~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~sl  199 (290)
T 3fme_A          131 VIHRDVKPSNVLIN-------ALGQVKMCDFGISGYLVDDVA----KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL  199 (290)
T ss_dssp             CCCCCCSGGGCEEC-------TTCCEEBCCC-------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHH
T ss_pred             eecCCCCHHHEEEC-------CCCCEEEeecCCccccccccc----ccccCCCccccChhhcChhhcCcCCCcHHHHHHH
Confidence            47999999999999       889999999999987654321    2334799999999997   344568999999999


Q ss_pred             HHHHHHHhhCCCCCCCC-CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          82 GCILAEMISNRPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        82 G~il~ell~g~~pf~~~-~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      ||++++|++|+.||.+. .....+..+.......                             ......++++.+||.+|
T Consensus       200 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~  250 (290)
T 3fme_A          200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ-----------------------------LPADKFSAEFVDFTSQC  250 (290)
T ss_dssp             HHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-----------------------------CCTTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCccccCchHHHHHHHhccCCCC-----------------------------cccccCCHHHHHHHHHH
Confidence            99999999999999763 3333333332211000                             01124678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccccCC
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      |+.||.+|||++++++||||+.....
T Consensus       251 l~~~p~~Rpt~~e~l~hp~f~~~~~~  276 (290)
T 3fme_A          251 LKKNSKERPTYPELMQHPFFTLHESK  276 (290)
T ss_dssp             TCSSGGGSCCHHHHTTSHHHHHHHHS
T ss_pred             hhcChhhCcCHHHHHhCcccccCccc
Confidence            99999999999999999999764333

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.95  E-value=5.9e-28  Score=207.36  Aligned_cols=142  Identities=27%  Similarity=0.404  Sum_probs=111.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++.    .+..+.+||+|||++........    .....||+.|+|||++.+ ..++.++||||+||++
T Consensus       127 ~H~dikp~Nil~~~----~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  197 (284)
T 3kk8_A          127 VHRNLKPENLLLAS----KAKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVIL  197 (284)
T ss_dssp             ECSCCCGGGEEESS----SSTTCCEEECCCTTCEECCSSCB----CCCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             CcCCCCHHHEEEec----CCCCCcEEEeeceeeEEcccCcc----ccCCCCCcCCcCchhhcC-CCCCcccchHHHHHHH
Confidence            69999999999971    01234499999999987654322    345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+.+.......+.......+..                           ....+++++.+||.+||+.||
T Consensus       198 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~dp  250 (284)
T 3kk8_A          198 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP---------------------------EWDTVTPEAKSLIDSMLTVNP  250 (284)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT---------------------------TTTTSCHHHHHHHHHHSCSST
T ss_pred             HHHHHCCCCCCCCchhHHHHHHHhccccCCch---------------------------hhcccCHHHHHHHHHHcccCh
Confidence            99999999999888777666655432211111                           123568899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+++||||+..
T Consensus       251 ~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          251 KKRITADQALKVPWICNR  268 (284)
T ss_dssp             TTSCCHHHHTTSHHHHSC
T ss_pred             hhCCCHHHHhcCccccCC
Confidence            999999999999999763

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.95  E-value=4e-28  Score=215.82  Aligned_cols=142  Identities=23%  Similarity=0.375  Sum_probs=94.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCC--CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPA--DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~--~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      -.||||||+|||++       .++  .+||+|||+|+.......    ....+||+.|+|||++.+....+.++||||+|
T Consensus       137 ivH~Dlkp~Nill~-------~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  205 (361)
T 3uc3_A          137 ICHRDLKLENTLLD-------GSPAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCG  205 (361)
T ss_dssp             CCSCCCCGGGEEEC-------SSSSCCEEECCCCCC-------------------CTTSCHHHHHCSSCCHHHHHHHHHH
T ss_pred             cccCCCCHHHEEEc-------CCCCceEEEeecCccccccccCC----CCCCcCCCCcCChhhhcCCCCCCCeeeeehhH
Confidence            36999999999998       544  499999999985432211    34568999999999987655334559999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |++|+|++|+.||.+......+..+.. +.....                 ..+         ....+++++.+||.+||
T Consensus       206 ~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-----------------~~~---------~~~~~s~~~~~li~~~L  259 (361)
T 3uc3_A          206 VTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-----------------SIP---------DDIRISPECCHLISRIF  259 (361)
T ss_dssp             HHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC-----------------CCC---------TTSCCCHHHHHHHHHHS
T ss_pred             HHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-----------------CCC---------CcCCCCHHHHHHHHHHc
Confidence            999999999999987543222222211 111000                 000         01246899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      +.||.+|||++|+++||||...
T Consensus       260 ~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          260 VADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             CSCTTTSCCHHHHHTSHHHHTT
T ss_pred             cCChhHCcCHHHHHhCcchhcC
Confidence            9999999999999999999653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.95  E-value=2.1e-28  Score=216.03  Aligned_cols=144  Identities=28%  Similarity=0.433  Sum_probs=107.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||+..   ..+..+.+||+|||+|+.......   .....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       138 vHrDlkp~NIl~~~---~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  210 (342)
T 2qr7_A          138 VHRDLKPSNILYVD---ESGNPESIRICDFGFAKQLRAENG---LLMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLL  210 (342)
T ss_dssp             ECSCCCGGGEEESS---SSCSGGGEEECCCTTCEECBCTTC---CBCCSSCCSSCCCHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             EeccCCHHHEEEec---CCCCcCeEEEEECCCcccCcCCCC---ceeccCCCccccCHHHhcC-CCCCCccCeeeHhHHH
Confidence            69999999999851   001123599999999987644321   2355689999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCC---CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          86 AEMISNRPIFPGK---HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        86 ~ell~g~~pf~~~---~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |+|++|..||.+.   +..+.+..+.......                           ....++.++.++.+||.+||.
T Consensus       211 ~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~---------------------------~~~~~~~~s~~~~~li~~~L~  263 (342)
T 2qr7_A          211 YTMLTGYTPFANGPDDTPEEILARIGSGKFSL---------------------------SGGYWNSVSDTAKDLVSKMLH  263 (342)
T ss_dssp             HHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC---------------------------CSTTTTTSCHHHHHHHHHHTC
T ss_pred             HHHhcCCCCCCCCCcCCHHHHHHHHccCCccc---------------------------CccccccCCHHHHHHHHHHCC
Confidence            9999999999763   3333333332211000                           011234678999999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .||.+|||++++++||||..+
T Consensus       264 ~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          264 VDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             SSTTTSCCHHHHTTSHHHHTG
T ss_pred             CChhHCcCHHHHhcCCeecCc
Confidence            999999999999999999653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=1.8e-28  Score=218.81  Aligned_cols=143  Identities=13%  Similarity=0.095  Sum_probs=105.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      .....||+.|+|||++.+. ..++.++||||+||+
T Consensus       216 vHrDikp~NIll~-------~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~i  282 (371)
T 3q60_A          216 VHGHFTPDNLFIM-------PDGRLMLGDVSALWKVGTR------GPASSVPVTYAPREFLNASTATFTHALNAWQLGLS  282 (371)
T ss_dssp             EETTCSGGGEEEC-------TTSCEEECCGGGEEETTCE------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHH
T ss_pred             ccCcCCHHHEEEC-------CCCCEEEEecceeeecCCC------ccCccCCcCCcChhhccCCCCCcCccccHHHHHHH
Confidence            5999999999999       8899999999999876432      1245677999999998641 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+......             ..+...        ...........+ ...+.+++.+.+||.+||+.|
T Consensus       283 l~elltg~~Pf~~~~~~~~-------------~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~d  340 (371)
T 3q60_A          283 IYRVWCLFLPFGLVTPGIK-------------GSWKRP--------SLRVPGTDSLAF-GSCTPLPDFVKTLIGRFLNFD  340 (371)
T ss_dssp             HHHHHHSSCSTTBCCTTCT-------------TCCCBC--------CTTSCCCCSCCC-TTSSCCCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCcCcccc-------------cchhhh--------hhhhccccccch-hhccCCCHHHHHHHHHHcCCC
Confidence            9999999999977642100             000000        000000000011 112467899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++++|+||||+..
T Consensus       341 P~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          341 RRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             TTTCCCHHHHTTSHHHHHH
T ss_pred             hhhCCCHHHHhcCHHHHHH
Confidence            9999999999999999763

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=3.4e-28  Score=218.41  Aligned_cols=141  Identities=23%  Similarity=0.369  Sum_probs=102.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC----------CCCCch
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----------KGYTKS   75 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----------~~~~~~   75 (308)
                      .||||||+|||++        ++.+||+|||+|+........ ......+||+.|+|||++.+.          ..++.+
T Consensus       177 vHrDlkp~NIll~--------~~~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~  247 (390)
T 2zmd_A          177 VHSDLKPANFLIV--------DGMLKLIDFGIANQMQPDTTS-VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPK  247 (390)
T ss_dssp             CCCCCCGGGEEES--------SSCEEECCCSSSCCC----------CCSCCCGGGCCHHHHHCC------------CCHH
T ss_pred             eecCCCHHHEEEE--------CCeEEEEecCccccccCCCcc-ccCCCCCcCCCccChHHhhhccccccccccccCCCCh
Confidence            7999999999996        478999999999876533211 113456899999999998641          358999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHH
Q psy7274          76 IDIWSVGCILAEMISNRPIFPGKHY-LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNAL  154 (308)
Q Consensus        76 ~DiWSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  154 (308)
                      +||||+||++|+|++|+.||.+... ...+..+...   .                       ...   ......+.++.
T Consensus       248 ~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~---~-----------------------~~~---~~~~~~~~~~~  298 (390)
T 2zmd_A          248 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP---N-----------------------HEI---EFPDIPEKDLQ  298 (390)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCT---T-----------------------SCC---CCCCCSCHHHH
T ss_pred             hhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCc---c-----------------------ccC---CCCccchHHHH
Confidence            9999999999999999999977542 2222222210   0                       000   01123467899


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCCcccccc
Q psy7274         155 DLLGKMLTFNPHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       155 ~ll~~~L~~dP~~R~t~~eil~hp~f~~~~  184 (308)
                      +||.+||..||.+|||++|+|+||||+...
T Consensus       299 ~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          299 DVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            999999999999999999999999997643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=1e-27  Score=206.35  Aligned_cols=140  Identities=26%  Similarity=0.377  Sum_probs=104.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.    .+.++.+||+|||+|+.......    ....+||..|+|||++.  ..++.++||||+||+
T Consensus       145 ivH~dikp~NIl~~~----~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~i  214 (285)
T 3is5_A          145 VVHKDLKPENILFQD----TSPHSPIKIIDFGLAELFKSDEH----STNAAGTALYMAPEVFK--RDVTFKCDIWSAGVV  214 (285)
T ss_dssp             CCCCCCSGGGEEESS----SSTTCCEEECCCCCCCC--------------CTTGGGCCHHHHT--TCCCHHHHHHHHHHH
T ss_pred             EEECCCCHHHEEEec----CCCCCCEEEEeeecceecCCccc----CcCcccccCcCChHHhc--cCCCcccCeehHHHH
Confidence            369999999999951    11568899999999987644321    34568999999999874  358999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+....+......                            +.......++++.+||.+||+.|
T Consensus       215 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~L~~d  266 (285)
T 3is5_A          215 MYFLLTGCLPFTGTSLEEVQQKATYKEPN----------------------------YAVECRPLTPQAVDLLKQMLTKD  266 (285)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------------CCC--CCCCHHHHHHHHHHTCSC
T ss_pred             HHHHHhCCCCCCCCCHHHHHhhhccCCcc----------------------------cccccCcCCHHHHHHHHHHccCC
Confidence            99999999999988765554443321110                            00111236789999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||++|+|+||||++
T Consensus       267 P~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          267 PERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             TTTSCCHHHHHTSGGGGC
T ss_pred             hhhCcCHHHHhcCHHhhc
Confidence            999999999999999964

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=6.7e-28  Score=213.30  Aligned_cols=135  Identities=23%  Similarity=0.392  Sum_probs=110.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .++.+||+|||+|+....       ....+||+.|+|||++.+  ...++.++||||+||
T Consensus       176 vH~Dlkp~NIll~-------~~~~~kL~DfG~a~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~  241 (348)
T 1u5q_A          176 IHRDVKAGNILLS-------EPGLVKLGDFGSASIMAP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI  241 (348)
T ss_dssp             BCCCCSGGGEEEE-------TTTEEEECCCTTCBSSSS-------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHH
T ss_pred             eeCCCCHHHEEEC-------CCCCEEEeeccCceecCC-------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHH
Confidence            6999999999999       889999999999987643       234589999999999863  345899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++||++|+.||.+.+....+..+..... +.                            ......+..+.+||.+||+.
T Consensus       242 il~ell~g~~p~~~~~~~~~~~~~~~~~~-~~----------------------------~~~~~~~~~l~~li~~~l~~  292 (348)
T 1u5q_A          242 TCIELAERKPPLFNMNAMSALYHIAQNES-PA----------------------------LQSGHWSEYFRNFVDSCLQK  292 (348)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CC----------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhcCC-CC----------------------------CCCCCCCHHHHHHHHHHccc
Confidence            99999999999988887666655543211 00                            01124578999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+|||++++++||||...
T Consensus       293 dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          293 IPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             SGGGSCCHHHHTTCHHHHSC
T ss_pred             ChhhCcCHHHHhhChhhhcc
Confidence            99999999999999999653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.95  E-value=5.1e-28  Score=210.99  Aligned_cols=144  Identities=26%  Similarity=0.373  Sum_probs=99.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCC---ceEeccCCccccCCCCC----CCCCccCcccccccchhhHhhCC----CCCCc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPAD---EPICDFGLARVADPEHD----HTGFLTEYVATRWYRAPEIMLNS----KGYTK   74 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~---~ki~DFGla~~~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~----~~~~~   74 (308)
                      .||||||+|||++       .++.   +||+|||+++.......    ........+||..|+|||++.+.    ..++.
T Consensus       133 vH~dlkp~Nil~~-------~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  205 (316)
T 2ac3_A          133 AHRDLKPENILCE-------HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK  205 (316)
T ss_dssp             CCCCCCGGGEEES-------CSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTT
T ss_pred             eeCCCCHHHEEEc-------cCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCc
Confidence            6999999999998       5554   99999999986542211    01112345799999999998641    33789


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCHH---------------HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCC
Q psy7274          75 SIDIWSVGCILAEMISNRPIFPGKHYL---------------DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPK  139 (308)
Q Consensus        75 ~~DiWSlG~il~ell~g~~pf~~~~~~---------------~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  139 (308)
                      ++||||+||++++|++|+.||.+....               .....+.......+.                       
T Consensus       206 ~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------  262 (316)
T 2ac3_A          206 RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD-----------------------  262 (316)
T ss_dssp             THHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH-----------------------
T ss_pred             ccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCc-----------------------
Confidence            999999999999999999999875421               111111111110100                       


Q ss_pred             CCccccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         140 VPWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       140 ~~~~~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                          .....++..+.+||.+||..||.+|||++|+++||||+..
T Consensus       263 ----~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          263 ----KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             ----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             ----hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence                1113468899999999999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.95  E-value=6.4e-28  Score=206.77  Aligned_cols=134  Identities=25%  Similarity=0.427  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||++.......     ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       131 ~H~dlkp~Nili~-------~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  197 (279)
T 3fdn_A          131 IHRDIKPENLLLG-------SAGELKIADFGWSVHAPSSR-----RTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLC  197 (279)
T ss_dssp             EECCCCGGGEEEC-------TTSCEEECSCCEESCC-------------CCCCTTCCHHHHTT-CCCCTTHHHHHHHHHH
T ss_pred             ecccCChHhEEEc-------CCCCEEEEeccccccCCccc-----ccccCCCCCccCHhHhcc-CCCCccchhHhHHHHH
Confidence            6999999999999       89999999999987554322     244589999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+.+..+....+......                               .....+..+.+||.+||..||
T Consensus       198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p  246 (279)
T 3fdn_A          198 YEFLVGKPPFEANTYQETYKRISRVEFT-------------------------------FPDFVTEGARDLISRLLKHNP  246 (279)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHTCCC-------------------------------CCTTSCHHHHHHHHHHCCSSG
T ss_pred             HHHHHCCCCCCCCcHHHHHHHHHhCCCC-------------------------------CCCcCCHHHHHHHHHHhccCh
Confidence            9999999999988877766665432211                               112357899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+++||||+..
T Consensus       247 ~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          247 SQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             GGSCCHHHHHHCHHHHHH
T ss_pred             hhCCCHHHHhhCccccCC
Confidence            999999999999999764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=3.7e-29  Score=223.78  Aligned_cols=129  Identities=17%  Similarity=0.162  Sum_probs=101.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC----------CCCCch
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----------KGYTKS   75 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----------~~~~~~   75 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      .+..+| +.|+|||++.+.          ..++.+
T Consensus       228 vHrDikp~NIll~-------~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~  293 (377)
T 3byv_A          228 VHTYLRPVDIVLD-------QRGGVFLTGFEHLVRDGAR------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFS  293 (377)
T ss_dssp             ECSCCCGGGEEEC-------TTCCEEECCGGGCEETTCE------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHH
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEEechhheecCCc------ccCCCC-cCccChhhhcccccccccccccccCChh
Confidence            6999999999999       8899999999999864321      345678 999999998754          159999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          76 IDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        76 ~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      +||||+||++|||++|+.||.+.+.......+                                   ....+.+++++.+
T Consensus       294 ~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~  338 (377)
T 3byv_A          294 FDAWALGLVIYWIWCADLPITKDAALGGSEWI-----------------------------------FRSCKNIPQPVRA  338 (377)
T ss_dssp             HHHHHHHHHHHHHHHSSCCC------CCSGGG-----------------------------------GSSCCCCCHHHHH
T ss_pred             hhHHHHHHHHHHHHHCCCCCcccccccchhhh-----------------------------------hhhccCCCHHHHH
Confidence            99999999999999999999765422111111                                   0012357899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         156 LLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       156 ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+||..||.+|||+.++++||||+..
T Consensus       339 li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          339 LLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             HHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             HHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            9999999999999999999999999763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.8e-28  Score=216.33  Aligned_cols=143  Identities=22%  Similarity=0.359  Sum_probs=105.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......  ......+||..|+|||++.+. ..++.++||||+||
T Consensus       180 ivH~Dlkp~NIll~-------~~~~~kl~DfG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~  250 (355)
T 1vzo_A          180 IIYRDIKLENILLD-------SNGHVVLTDFGLSKEFVADET--ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGV  250 (355)
T ss_dssp             CCCCCCCGGGEEEC-------TTSCEEESCSSEEEECCGGGG--GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHH
T ss_pred             cccCCCCHHHEEEC-------CCCcEEEeeCCCCeecccCCC--CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHH
Confidence            37999999999999       899999999999987643221  113456899999999998753 34789999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|+|++|+.||.+.........+...                   .....+        .....++..+.+||.+||..
T Consensus       251 il~ell~g~~pf~~~~~~~~~~~~~~~-------------------~~~~~~--------~~~~~~~~~~~~li~~~L~~  303 (355)
T 1vzo_A          251 LMYELLTGASPFTVDGEKNSQAEISRR-------------------ILKSEP--------PYPQEMSALAKDLIQRLLMK  303 (355)
T ss_dssp             HHHHHHHSSCTTSCTTSCCCHHHHHHH-------------------HHHCCC--------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCCCccCCccchHHHHHHH-------------------HhccCC--------CCCcccCHHHHHHHHHHhhh
Confidence            999999999999754321111111110                   000000        11235678999999999999


Q ss_pred             CCCCCC-----CHHHHhcCCccccc
Q psy7274         164 NPHKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~-----t~~eil~hp~f~~~  183 (308)
                      ||.+||     |++++++||||+..
T Consensus       304 dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          304 DPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             SGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             CHHHhcCCCCCCHHHHHcCcchhcC
Confidence            999999     99999999999763

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.95  E-value=5.3e-28  Score=219.18  Aligned_cols=142  Identities=28%  Similarity=0.487  Sum_probs=100.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++.    .+.++.+||+|||+|+......    .....+||+.|+|||++.+  ...++.++||||+||
T Consensus       261 vHrDlkp~NIll~~----~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~  332 (419)
T 3i6u_A          261 IHRDLKPENVLLSS----QEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV  332 (419)
T ss_dssp             CCSCCCGGGEEESS----SSSSCCEEECCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHH
T ss_pred             cccCCChHhEEEec----CCCcceEEEeecccceecCCCc----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHH
Confidence            69999999999971    1134569999999998765322    2355789999999999753  345889999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHH-HHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNH-ILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~-i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++|+|++|+.||.+......+.. +........+                           ..+..+++.+.+||.+||+
T Consensus       333 il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~L~  385 (419)
T 3i6u_A          333 ILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP---------------------------EVWAEVSEKALDLVKKLLV  385 (419)
T ss_dssp             HHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCH---------------------------HHHTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCc---------------------------hhhcccCHHHHHHHHHHcc
Confidence            99999999999977543322222 2111111111                           1123568999999999999


Q ss_pred             cCCCCCCCHHHHhcCCcccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~  182 (308)
                      .||.+|||++|+|+||||+.
T Consensus       386 ~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          386 VDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             SSTTTSCCHHHHHHSGGGCC
T ss_pred             CChhHCcCHHHHhCCcccCC
Confidence            99999999999999999975

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.94  E-value=9.6e-28  Score=211.91  Aligned_cols=142  Identities=24%  Similarity=0.371  Sum_probs=100.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----------CCCCCch
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----------SKGYTKS   75 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----------~~~~~~~   75 (308)
                      .||||||+|||++        ++.+||+|||+|+........ ......+||+.|+|||++.+          ...++.+
T Consensus       130 iHrDikp~NIll~--------~~~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~  200 (343)
T 3dbq_A          130 VHSDLKPANFLIV--------DGMLKLIDFGIANQMQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK  200 (343)
T ss_dssp             CCCCCCGGGEEEE--------TTEEEECCCSSSCCC-------------CCCCSSCCHHHHHHCC-----------CCHH
T ss_pred             ecCCCCcceEEEE--------CCcEEEeecccccccCccccc-ccCCCCcCCcCcCCHHHHhhccccccccccccCCCch
Confidence            6999999999995        477999999999876543211 11345689999999999864          2458999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHH
Q psy7274          76 IDIWSVGCILAEMISNRPIFPGKHY-LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNAL  154 (308)
Q Consensus        76 ~DiWSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  154 (308)
                      +||||+||++++|++|+.||.+... ...+..+.   ....                       .   .......+.++.
T Consensus       201 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~-----------------------~---~~~~~~~~~~l~  251 (343)
T 3dbq_A          201 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAII---DPNH-----------------------E---IEFPDIPEKDLQ  251 (343)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH---CTTS-----------------------C---CCCCCCSCHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh---cCCc-----------------------c---cCCcccCCHHHH
Confidence            9999999999999999999976432 22222221   1000                       0   011123467899


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCCccccccC
Q psy7274         155 DLLGKMLTFNPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       155 ~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~  185 (308)
                      +||.+||+.||.+|||++++++||||+....
T Consensus       252 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~  282 (343)
T 3dbq_A          252 DVLKCCLKRDPKQRISIPELLAHPYVQIQTH  282 (343)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC
T ss_pred             HHHHHHcCCChhHCCCHHHHHhCccccccCC
Confidence            9999999999999999999999999976433

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.94  E-value=4.1e-27  Score=203.52  Aligned_cols=140  Identities=31%  Similarity=0.523  Sum_probs=113.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh-----CCCCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~~DiWS   80 (308)
                      .||||||+||+++       .++.+||+|||++........    ....+||..|+|||++.     ....++.++||||
T Consensus       146 ~H~dl~p~Nil~~-------~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~s  214 (298)
T 1phk_A          146 VHRDLKPENILLD-------DDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS  214 (298)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCTTCEECCTTCC----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred             ccCCCCcceEEEc-------CCCcEEEecccchhhcCCCcc----cccccCCccccCHHHhccccccccccCCcccccHh
Confidence            6999999999999       889999999999987654322    34568999999999985     2345889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||++++|++|..||.+.+.......+..........                           ..+..+..+.+||.+|
T Consensus       215 lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~  267 (298)
T 1phk_A          215 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP---------------------------EWDDYSDTVKDLVSRF  267 (298)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT---------------------------TGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc---------------------------cccccCHHHHHHHHHH
Confidence            9999999999999999888766666555422111110                           0124678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |..||.+|||++++++||||++.
T Consensus       268 l~~dp~~Rps~~~ll~h~~~~~~  290 (298)
T 1phk_A          268 LVVQPQKRYTAEEALAHPFFQQY  290 (298)
T ss_dssp             CCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             ccCCcccCCCHHHHHhChHhhhc
Confidence            99999999999999999999764

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=2.5e-27  Score=205.68  Aligned_cols=143  Identities=24%  Similarity=0.383  Sum_probs=112.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||+..    .+.++.+||+|||+++.....     .....+||..|+|||++.+ ..++.++||||+||+
T Consensus       127 i~H~dikp~NIl~~~----~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  196 (304)
T 2jam_A          127 IVHRDLKPENLLYLT----PEENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVI  196 (304)
T ss_dssp             CCCCSCCGGGCEESS----SSTTCCEEBCSCSTTCCCCCB-----TTHHHHSCCCBCCTTTBSS-CSCCHHHHHHHHHHH
T ss_pred             ccccCCCHHHEEEec----CCCCCCEEEccCCcceecCCC-----ccccccCCCCccChHHhcc-CCCCchhhHHHHHHH
Confidence            379999999999920    017789999999999764322     1345579999999999864 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+.+....+..+.........                           ...+.++..+.+||.+||..|
T Consensus       197 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~d  249 (304)
T 2jam_A          197 TYILLCGYPPFYEETESKLFEKIKEGYYEFES---------------------------PFWDDISESAKDFICHLLEKD  249 (304)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCT---------------------------TTTTTSCHHHHHHHHHHHCSS
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---------------------------cccccCCHHHHHHHHHHcCCC
Confidence            99999999999988877666665542211110                           112356899999999999999


Q ss_pred             CCCCCCHHHHhcCCcccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~  184 (308)
                      |.+|||++++++||||+...
T Consensus       250 p~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          250 PNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             TTTSCCHHHHHTSHHHHSSC
T ss_pred             hhHCcCHHHHhcCccccCCC
Confidence            99999999999999997653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.94  E-value=3.6e-27  Score=204.54  Aligned_cols=143  Identities=22%  Similarity=0.287  Sum_probs=112.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC-CCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK-GYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||++........ ........||..|+|||++.+.. .++.++||||+||+
T Consensus       131 ~H~dlkp~NIl~~-------~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i  202 (305)
T 2wtk_C          131 VHKDIKPGNLLLT-------TGGTLKISALGVAEALHPFAA-DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVT  202 (305)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCTTCEECCTTCS-SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHH
T ss_pred             eecCCCcccEEEc-------CCCcEEeeccccccccCcccc-ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHH
Confidence            6999999999999       889999999999987653221 11234567999999999986432 24789999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+.......+.....                               ......++.+.+||.+||..|
T Consensus       203 l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~d  251 (305)
T 2wtk_C          203 LYNITTGLYPFEGDNIYKLFENIGKGSY-------------------------------AIPGDCGPPLSDLLKGMLEYE  251 (305)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCC-------------------------------CCCSSSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCchHHHHHHHHhcCCC-------------------------------CCCCccCHHHHHHHHHHccCC
Confidence            9999999999998876665554432110                               012346789999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPA  187 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~  187 (308)
                      |.+|||++++++||||+....+.
T Consensus       252 p~~Rps~~~ll~~~~~~~~~~~~  274 (305)
T 2wtk_C          252 PAKRFSIRQIRQHSWFRKKHPPA  274 (305)
T ss_dssp             TTTSCCHHHHHHSHHHHSCCCC-
T ss_pred             hhhCCCHHHHhcCcccccCCCCc
Confidence            99999999999999998754443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.94  E-value=2.6e-27  Score=203.44  Aligned_cols=134  Identities=22%  Similarity=0.383  Sum_probs=110.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.......     ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       136 ~H~dl~p~Nil~~-------~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  202 (284)
T 2vgo_A          136 IHRDIKPENLLMG-------YKGELKIADFGWSVHAPSLR-----RRTMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLC  202 (284)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCCTTCEECSSSC-----BCCCCSCGGGCCHHHHTT-CCBCTTHHHHHHHHHH
T ss_pred             eecCCCHHHEEEc-------CCCCEEEecccccccCcccc-----cccccCCCCcCCHHHhcc-CCCCcccchhhHHHHH
Confidence            6999999999998       88999999999997654321     234589999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+.+..+....+.....                               .+.+.++..+.+||.+||..||
T Consensus       203 ~~l~~g~~pf~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p  251 (284)
T 2vgo_A          203 YEFLVGMPPFDSPSHTETHRRIVNVDL-------------------------------KFPPFLSDGSKDLISKLLRYHP  251 (284)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHTTCC-------------------------------CCCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHHCCCCCCCCCHhHHHHHHhcccc-------------------------------CCCCcCCHHHHHHHHHHhhcCH
Confidence            999999999988876665554432110                               0113467899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||+..
T Consensus       252 ~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          252 PQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             GGSCCHHHHHTCHHHHHH
T ss_pred             hhCCCHHHHhhCHHHHhh
Confidence            999999999999999764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=7.6e-28  Score=213.86  Aligned_cols=167  Identities=20%  Similarity=0.273  Sum_probs=110.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......     ....+||+.|+|||++.+ ..++.++||||+||+
T Consensus       153 i~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~i  219 (360)
T 3eqc_A          153 IMHRDVKPSNILVN-------SRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLS  219 (360)
T ss_dssp             CCCSCCSGGGEEEC-------TTCCEEECCCCCCHHHHHHC---------CCCCTTCCHHHHTT-CCCSHHHHHHHHHHH
T ss_pred             EEcCCccHHHEEEC-------CCCCEEEEECCCCccccccc-----ccCCCCCCCeECHHHHcC-CCCCchhhHHHHHHH
Confidence            36999999999999       88999999999997653221     244589999999999865 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHh-hCCCChhhHhhhh-----------------hHHHHHHhhcCCCCCCCCccccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGI-LGSPTPEDLSCII-----------------NEKARSYLQSLPFKPKVPWEILY  146 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~-~~~p~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~  146 (308)
                      +++|++|+.||.+.+..+....+... .+...........                 ............. .    ....
T Consensus       220 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~  294 (360)
T 3eqc_A          220 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP-P----KLPS  294 (360)
T ss_dssp             HHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCC-C----CCCT
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC-C----CCCc
Confidence            99999999999887765543332111 1111100000000                 0000001100000 0    0111


Q ss_pred             CCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccccCCCCC
Q psy7274         147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADE  189 (308)
Q Consensus       147 ~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~~~~~~~  189 (308)
                      ..++.++.+||.+||+.||.+|||++++|+||||+........
T Consensus       295 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~  337 (360)
T 3eqc_A          295 GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD  337 (360)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHHSCCC
T ss_pred             ccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchHhhhh
Confidence            2468899999999999999999999999999999875444333

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.94  E-value=1.6e-27  Score=209.85  Aligned_cols=130  Identities=18%  Similarity=0.260  Sum_probs=104.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......    ....+||..|+|||++.+...++.++||||+||++
T Consensus       152 vH~Dlkp~NIll~-------~~~~~kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  220 (335)
T 3dls_A          152 IHRDIKDENIVIA-------EDFTIKLIDFGSAAYLERGKL----FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL  220 (335)
T ss_dssp             ECSCCSGGGEEEC-------TTSCEEECCCTTCEECCTTCC----BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHH
T ss_pred             EEeccCHHHEEEc-------CCCcEEEeecccceECCCCCc----eeccCCCccccChhhhcCCCCCCCcccchhHHHHH
Confidence            6999999999999       889999999999987654322    34568999999999987655448899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|..||.+....         ..                       ...     .....+++++.+||.+||..||
T Consensus       221 ~el~~g~~pf~~~~~~---------~~-----------------------~~~-----~~~~~~~~~l~~li~~~L~~dP  263 (335)
T 3dls_A          221 YTLVFEENPFCELEET---------VE-----------------------AAI-----HPPYLVSKELMSLVSGLLQPVP  263 (335)
T ss_dssp             HHHHHSSCSCSSGGGG---------TT-----------------------TCC-----CCSSCCCHHHHHHHHHHTCSSG
T ss_pred             HHHHhCCCchhhHHHH---------Hh-----------------------hcc-----CCCcccCHHHHHHHHHHccCCh
Confidence            9999999999652110         00                       000     0112368999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||+..
T Consensus       264 ~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          264 ERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             GGSCCHHHHHHCTTTTCC
T ss_pred             hhCcCHHHHhcCccccCC
Confidence            999999999999999763

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.94  E-value=3.7e-27  Score=203.11  Aligned_cols=137  Identities=18%  Similarity=0.302  Sum_probs=105.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.      .++.+||+|||+|.......     ....+||..|+|||++.+  .++.++||||+||+
T Consensus       152 i~H~dikp~Nil~~~------~~~~~kl~Dfg~~~~~~~~~-----~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~  218 (290)
T 1t4h_A          152 IIHRDLKCDNIFITG------PTGSVKIGDLGLATLKRASF-----AKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMC  218 (290)
T ss_dssp             CCCSCCCGGGEEESS------TTSCEEECCTTGGGGCCTTS-----BEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHH
T ss_pred             EEECCCCHHHEEEEC------CCCCEEEeeCCCcccccccc-----cccccCCcCcCCHHHHhc--cCCCcchHHHHHHH
Confidence            479999999999962      67899999999997654321     344679999999998753  48999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+......+........ . +                          .......++++.+||.+||..|
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~-~--------------------------~~~~~~~~~~l~~li~~~l~~d  270 (290)
T 1t4h_A          219 MLEMATSEYPYSECQNAAQIYRRVTSGV-K-P--------------------------ASFDKVAIPEVKEIIEGCIRQN  270 (290)
T ss_dssp             HHHHHHSSCTTTTCSSHHHHHHHHTTTC-C-C--------------------------GGGGGCCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCcCcHHHHHHHHhccC-C-c--------------------------cccCCCCCHHHHHHHHHHccCC
Confidence            9999999999987655444332221110 0 0                          0111245688999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||++++++||||++
T Consensus       271 p~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          271 KDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GGGSCCHHHHHTSGGGC-
T ss_pred             hhhCCCHHHHhhCccccc
Confidence            999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.94  E-value=5.8e-27  Score=206.23  Aligned_cols=144  Identities=25%  Similarity=0.439  Sum_probs=115.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........   ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       163 vH~dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il  231 (335)
T 2owb_A          163 IHRDLKLGNLFLN-------EDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIM  231 (335)
T ss_dssp             ECSCCCGGGEEEC-------TTCCEEECCCTTCEECCSTTCC---BCCCCSCCSSCCHHHHHT-SCBCTHHHHHHHHHHH
T ss_pred             EecCCCchhEEEc-------CCCCEEEeeccCceecccCccc---ccccCCCccccCHHHhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999999876533211   344689999999999875 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+....+.+..+.....                               .+...+++.+.+||.+||+.||
T Consensus       232 ~~l~~g~~pf~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~dp  280 (335)
T 2owb_A          232 YTLLVGKPPFETSCLKETYLRIKKNEY-------------------------------SIPKHINPVAASLIQKMLQTDP  280 (335)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHTCC-------------------------------CCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHHCcCCCCCCCHHHHHHHHhcCCC-------------------------------CCCccCCHHHHHHHHHHccCCh
Confidence            999999999988876665544432110                               0112467899999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCc
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPV  191 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~  191 (308)
                      .+|||++++++||||.....+...++
T Consensus       281 ~~Rps~~ell~~~~~~~~~~~~~~~~  306 (335)
T 2owb_A          281 TARPTINELLNDEFFTSGYIPARLPI  306 (335)
T ss_dssp             GGSCCGGGGGGSHHHHTSCCCSCCCG
T ss_pred             hHCcCHHHHhcCccccCCCccccCCc
Confidence            99999999999999987655544443

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=5.5e-27  Score=205.52  Aligned_cols=137  Identities=21%  Similarity=0.341  Sum_probs=101.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC---------CCccCcccccccchhhHhhCCCCCCchh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKSI   76 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~---------~~~~~~~gt~~y~aPE~l~~~~~~~~~~   76 (308)
                      .||||||+|||++       .++.+||+|||+|+.........         ......+||+.|+|||++.+ ..++.++
T Consensus       186 vH~Dlkp~NIll~-------~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~  257 (332)
T 3qd2_B          186 MHRDLKPSNIFFT-------MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG-NNYSHKV  257 (332)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHC-CCCCTHH
T ss_pred             eecCCCcccEEEe-------CCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcC-CCCcchh
Confidence            6999999999999       88999999999999775432110         11345689999999999875 5599999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHH
Q psy7274          77 DIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL  156 (308)
Q Consensus        77 DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  156 (308)
                      ||||+||++++|++|..++     .+....+........+...                           ...++++.+|
T Consensus       258 Di~slG~il~el~~~~~~~-----~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l  305 (332)
T 3qd2_B          258 DIFSLGLILFELLYSFSTQ-----MERVRIITDVRNLKFPLLF---------------------------TQKYPQEHMM  305 (332)
T ss_dssp             HHHHHHHHHHHHHSCCCCH-----HHHHHHHHHHHTTCCCHHH---------------------------HHHCHHHHHH
T ss_pred             hHHHHHHHHHHHHHcCCCh-----hHHHHHHHHhhccCCCccc---------------------------ccCChhHHHH
Confidence            9999999999999986553     2222222222222211111                           1235788999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         157 LGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      |.+||+.||.+|||++|+++||||++
T Consensus       306 i~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          306 VQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             HHHHccCCCCcCCCHHHHhhchhhhc
Confidence            99999999999999999999999975

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=1.4e-27  Score=207.93  Aligned_cols=144  Identities=17%  Similarity=0.253  Sum_probs=106.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++...............+||..|+|||++.+ ..++.++||||+||+
T Consensus       137 ivH~dlkp~Nil~~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~  208 (311)
T 3ork_A          137 IIHRDVKPANIMIS-------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCV  208 (311)
T ss_dssp             CCCCCCCGGGEEEE-------TTSCEEECCCSCC------------------CCTTCCHHHHHT-CCCCHHHHHHHHHHH
T ss_pred             CCcCCCCHHHEEEc-------CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcC-CCCCchHhHHHHHHH
Confidence            36999999999998       8899999999999876543222222345679999999999875 459999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+.......+......+..                           .....++.++.+||.+||..|
T Consensus       209 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~d  261 (311)
T 3ork_A          209 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---------------------------ARHEGLSADLDAVVLKALAKN  261 (311)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHH---------------------------HHSTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHhcCCCCCcc---------------------------cccCCCCHHHHHHHHHHHhcC
Confidence            99999999999998876665555432221111                           112357899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+||++.++++|+|++..
T Consensus       262 P~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          262 PENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             GGGSCSSHHHHHHHHHHHH
T ss_pred             HhhChhhHHHHHHHHHHHh
Confidence            9999999999999999653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.94  E-value=6.1e-27  Score=202.15  Aligned_cols=145  Identities=25%  Similarity=0.440  Sum_probs=115.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........   ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       137 ~H~dl~p~Nil~~-------~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  205 (294)
T 2rku_A          137 IHRDLKLGNLFLN-------EDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIM  205 (294)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEECCSTTCC---BCCCCSCCSSCCHHHHTT-SCBCTHHHHHHHHHHH
T ss_pred             cccCCChHhEEEc-------CCCCEEEEeccCceecccCccc---cccccCCCCcCCcchhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999999876533221   244679999999999864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+....+....+.....                               ......++.+.++|.+||+.||
T Consensus       206 ~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p  254 (294)
T 2rku_A          206 YTLLVGKPPFETSCLKETYLRIKKNEY-------------------------------SIPKHINPVAASLIQKMLQTDP  254 (294)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHTTCC-------------------------------CCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHhhccC-------------------------------CCccccCHHHHHHHHHHcccCh
Confidence            999999999988776655444321100                               0112467899999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCch
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVS  192 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~  192 (308)
                      .+|||++++++||||.....+...++.
T Consensus       255 ~~Rps~~~ll~~~~~~~~~~~~~~~~~  281 (294)
T 2rku_A          255 TARPTINELLNDEFFTSGYIPARLPIT  281 (294)
T ss_dssp             GGSCCGGGGGGSHHHHTSCCCSCCCGG
T ss_pred             hhCcCHHHHhhChheecCCcCCCCCcc
Confidence            999999999999999887665555433

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=1.7e-27  Score=216.43  Aligned_cols=148  Identities=24%  Similarity=0.313  Sum_probs=98.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG   82 (308)
                      -.||||||+|||++..  ..+....+||+|||+|+............+..+||+.|+|||++.+  ...++.++||||+|
T Consensus       139 ivHrDlKp~NIll~~~--~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG  216 (432)
T 3p23_A          139 IVHRDLKPHNILISMP--NAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG  216 (432)
T ss_dssp             CCCCCCSTTSEEECCC--BTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHH
T ss_pred             CEeCCCCHHHEEEecC--CCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHH
Confidence            3699999999999510  1113346789999999876543222222455789999999999864  24578899999999


Q ss_pred             HHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          83 CILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        83 ~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      |+++||++ |..||.+.... +...+.   +.......                        ......+..+.+||.+||
T Consensus       217 ~il~ellt~g~~pf~~~~~~-~~~~~~---~~~~~~~~------------------------~~~~~~~~~~~~li~~~L  268 (432)
T 3p23_A          217 CVFYYVISEGSHPFGKSLQR-QANILL---GACSLDCL------------------------HPEKHEDVIARELIEKMI  268 (432)
T ss_dssp             HHHHHHHTTSCBTTBSTTTH-HHHHHT---TCCCCTTS------------------------CTTCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHcCCCCCcchhhHH-HHHHHh---ccCCcccc------------------------CccccccHHHHHHHHHHH
Confidence            99999999 88888654332 222211   11100000                        000112456899999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      +.||.+|||++++++||||..
T Consensus       269 ~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          269 AMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             CSSGGGSCCHHHHHTSTTTCC
T ss_pred             hCCHhhCCCHHHHHhCccccC
Confidence            999999999999999999965

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=4.7e-27  Score=200.84  Aligned_cols=141  Identities=25%  Similarity=0.342  Sum_probs=106.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........ .......+||..|+|||++.+...++.++||||+||++
T Consensus       127 ~H~dl~p~Nil~~-------~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  198 (276)
T 2yex_A          127 THRDIKPENLLLD-------ERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL  198 (276)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCTTCEECEETTE-ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHH
T ss_pred             eccCCChHHEEEc-------cCCCEEEeeCCCccccCCCcc-hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHH
Confidence            6999999999999       889999999999986543211 11234568999999999986544357899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHH-HHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQ-LNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~-l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+.||.+.+.... +..+.....                       .      ......++..+.+||.+||..|
T Consensus       199 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------~------~~~~~~~~~~~~~li~~~l~~~  249 (276)
T 2yex_A          199 TAMLAGELPWDQPSDSCQEYSDWKEKKT-----------------------Y------LNPWKKIDSAPLALLHKILVEN  249 (276)
T ss_dssp             HHHHHSSCCCSCSCTTSHHHHHHHTTCT-----------------------T------STTGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHhCCCCCCCCchHHHHHHHhhhccc-----------------------c------cCchhhcCHHHHHHHHHHCCCC
Confidence            999999999987653221 111111000                       0      0011246789999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++++++||||+..
T Consensus       250 p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          250 PSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             TTTSCCHHHHTTCTTTTCC
T ss_pred             chhCCCHHHHhcCccccCh
Confidence            9999999999999999764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.94  E-value=4.5e-27  Score=201.77  Aligned_cols=139  Identities=22%  Similarity=0.396  Sum_probs=109.2

Q ss_pred             CCCCCCCCCcccCccccccCCCC----CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA----DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~----~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+||+++       .++    .+||+|||+++.......    .....||..|+|||++.+ ..++.++||||+
T Consensus       130 ~H~dl~p~Nil~~-------~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~sl  197 (283)
T 3bhy_A          130 AHFDLKPENIMLL-------DKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNY-EPLGLEADMWSI  197 (283)
T ss_dssp             ECSCCSGGGEEES-------CSSSSSCCEEECCCTTCEECC------------CCCGGGCCHHHHTT-CCCCTHHHHHHH
T ss_pred             cCCCCChHHEEEe-------cCCCCCCceEEEecccceeccCCCc----ccccCCCcCccCcceecC-CCCCcchhhhhH
Confidence            6999999999998       444    899999999987654321    244579999999999864 558999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++++|++|..||.+.+..+.+..+..........                           ..+..+..+.+||.+||
T Consensus       198 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l  250 (283)
T 3bhy_A          198 GVITYILLSGASPFLGETKQETLTNISAVNYDFDEE---------------------------YFSNTSELAKDFIRRLL  250 (283)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHH---------------------------HHTTCCHHHHHHHHTTS
T ss_pred             HHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcch---------------------------hcccCCHHHHHHHHHHc
Confidence            999999999999999988777666654332222211                           12356789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCccccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ..||.+|||++++++||||+..
T Consensus       251 ~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          251 VKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             CSSGGGSCCHHHHHHCHHHHHH
T ss_pred             cCCHhHCcCHHHHHhCHHHHHH
Confidence            9999999999999999999764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=2.4e-28  Score=221.09  Aligned_cols=129  Identities=16%  Similarity=0.126  Sum_probs=103.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh---------CCCCCCchh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML---------NSKGYTKSI   76 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---------~~~~~~~~~   76 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      ....+| +.|+|||++.         ....++.++
T Consensus       233 iHrDiKp~NILl~-------~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~  298 (413)
T 3dzo_A          233 VHTYLRPVDIVLD-------QRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAF  298 (413)
T ss_dssp             ECSCCCGGGEEEC-------TTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHH
T ss_pred             ccCCcccceEEEe-------cCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhccccccccccCcCCCchh
Confidence            6999999999999       8899999999999875432      344578 9999999984         334588899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHH
Q psy7274          77 DIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL  156 (308)
Q Consensus        77 DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  156 (308)
                      ||||+||++|||++|+.||.+.+.......+                                   ......+++.+.+|
T Consensus       299 DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~l  343 (413)
T 3dzo_A          299 DTWTLGLAIYWIWCADLPNTDDAALGGSEWI-----------------------------------FRSCKNIPQPVRAL  343 (413)
T ss_dssp             HHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-----------------------------------GSSCCCCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-----------------------------------HhhcccCCHHHHHH
Confidence            9999999999999999999776422111100                                   00112567999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         157 LGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |.+||..||.+|||+.++++||||+.+
T Consensus       344 i~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          344 LEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            999999999999999999999999764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.94  E-value=2.6e-27  Score=205.06  Aligned_cols=151  Identities=21%  Similarity=0.323  Sum_probs=105.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC--CCCccCcccccccchhhHhhCCCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH--TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG   82 (308)
                      -.||||||+||+++       .++.+||+|||+++........  .......+||..|+|||++.+...++.++||||+|
T Consensus       142 i~H~dl~p~Nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  214 (303)
T 2vwi_A          142 QIHRDVKAGNILLG-------EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG  214 (303)
T ss_dssp             CCCCCCSGGGEEEC-------TTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHH
T ss_pred             CCCCCCChhhEEEc-------CCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHH
Confidence            37999999999999       8899999999999876432211  11124458999999999986544589999999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|+.||.+......+......  .+..                   ..............+.++.+||.+||.
T Consensus       215 ~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~~~~~li~~~l~  273 (303)
T 2vwi_A          215 ITAIELATGAAPYHKYPPMKVLMLTLQN--DPPS-------------------LETGVQDKEMLKKYGKSFRKMISLCLQ  273 (303)
T ss_dssp             HHHHHHHHSSCTTTTSCGGGHHHHHHTS--SCCC-------------------TTC-----CCCCCCCHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCCccCchhhHHHHHhcc--CCCc-------------------cccccccchhhhhhhHHHHHHHHHHcc
Confidence            9999999999999887654443322211  1100                   000011122334678999999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .||.+|||++++++||||+..
T Consensus       274 ~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          274 KDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             SSGGGSCCHHHHHTSTTC---
T ss_pred             CChhhCcCHHHHhhChhhhcC
Confidence            999999999999999999764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.94  E-value=4.7e-27  Score=200.92  Aligned_cols=137  Identities=25%  Similarity=0.354  Sum_probs=101.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||++........    ....+||..|+|||++.+....+.++||||+||+
T Consensus       132 i~H~dl~p~Nil~~-------~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  200 (276)
T 2h6d_A          132 VVHRDLKPENVLLD-------AHMNAKIADFGLSNMMSDGEF----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI  200 (276)
T ss_dssp             SSCCCCCGGGEEEC-------TTSCEEECCCCGGGCCCC-----------------CCTGGGTTSCCCHHHHHHHHHHHH
T ss_pred             CccCCCChhhEEEC-------CCCCEEEeecccccccCCCcc----eecccCCccccCHHHHcCCCCCCccchHHHHHHH
Confidence            37999999999999       889999999999987654321    2445789999999998754434789999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+....+..+......                               .....+..+.++|.+||+.|
T Consensus       201 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~l~~li~~~l~~~  249 (276)
T 2h6d_A          201 LYALLCGTLPFDDEHVPTLFKKIRGGVFY-------------------------------IPEYLNRSVATLLMHMLQVD  249 (276)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHhhcCccc-------------------------------CchhcCHHHHHHHHHHccCC
Confidence            99999999999887765555444321100                               11245789999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++++++||||+..
T Consensus       250 p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          250 PLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             GGGSCCHHHHHHSHHHHTT
T ss_pred             hhhCCCHHHHHhChhhccC
Confidence            9999999999999999753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.94  E-value=9.1e-27  Score=203.95  Aligned_cols=140  Identities=21%  Similarity=0.338  Sum_probs=103.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWS   80 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWS   80 (308)
                      -.||||||+|||++       .++.+||+|||++........   .....+||..|+|||++.+    ...++.++||||
T Consensus       150 ivH~dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s  219 (326)
T 2x7f_A          150 VIHRDIKGQNVLLT-------ENAEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS  219 (326)
T ss_dssp             CCCCCCSGGGEEEC-------TTCCEEECCCTTTC----------------CCGGGCCHHHHC--------CCTTHHHHH
T ss_pred             ccccCCcHHHEEEc-------CCCCEEEeeCcCceecCcCcc---ccccccCCccccChhhhccccccCcCCCccchHHH
Confidence            37999999999998       889999999999987643211   1244589999999999852    345889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||++++|++|..||.+.+....+..+.....                      +       .......+..+.+||.+|
T Consensus       220 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------~-------~~~~~~~~~~l~~li~~~  270 (326)
T 2x7f_A          220 LGITAIEMAEGAPPLCDMHPMRALFLIPRNPA----------------------P-------RLKSKKWSKKFQSFIESC  270 (326)
T ss_dssp             HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC----------------------C-------CCSCSCSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc----------------------c-------cCCccccCHHHHHHHHHH
Confidence            99999999999999988776655544332100                      0       001235678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |..||.+|||++++++||||+..
T Consensus       271 l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          271 LVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             CCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             hccChhhCCCHHHHhhChHHhhC
Confidence            99999999999999999999764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=6.5e-27  Score=204.68  Aligned_cols=142  Identities=28%  Similarity=0.491  Sum_probs=105.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh--CCCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++.    .+.++.+||+|||+++......    .....+||..|+|||++.  +...++.++||||+||
T Consensus       136 vH~dlkp~NIl~~~----~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~  207 (322)
T 2ycf_A          136 IHRDLKPENVLLSS----QEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV  207 (322)
T ss_dssp             ECCCCSGGGEEESS----SSSSCCEEECCCTTCEECCCCH----HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHH
T ss_pred             eccCCCHHHEEEec----CCCCCeEEEccCccceeccccc----ccccccCCcCccCchhhccCCCCCCCchhhHHHHHH
Confidence            69999999999981    0123359999999998764321    124457999999999974  2455899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHH-HHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQL-NHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l-~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++++|++|..||.+......+ ..+........+                           .....++..+.+||.+||.
T Consensus       208 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~  260 (322)
T 2ycf_A          208 ILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP---------------------------EVWAEVSEKALDLVKKLLV  260 (322)
T ss_dssp             HHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCH---------------------------HHHTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHhCCCCCcccchHHHHHHHHHhCccccCc---------------------------hhhhhcCHHHHHHHHHHcc
Confidence            999999999999765432222 222211111111                           1123568899999999999


Q ss_pred             cCCCCCCCHHHHhcCCcccc
Q psy7274         163 FNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~  182 (308)
                      .||.+|||++++++||||+.
T Consensus       261 ~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          261 VDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             SSTTTSCCHHHHHTSGGGCC
T ss_pred             cCHhhCCCHHHHhhCcCcCC
Confidence            99999999999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.93  E-value=7.9e-27  Score=202.11  Aligned_cols=141  Identities=22%  Similarity=0.306  Sum_probs=107.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh----CCCCCCchhhHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDIWS   80 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiWS   80 (308)
                      -.||||||+|||++       .++.+||+|||++........   .....+||..|+|||++.    ....++.++||||
T Consensus       138 i~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s  207 (302)
T 2j7t_A          138 IIHRDLKAGNVLMT-------LEGDIRLADFGVSAKNLKTLQ---KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS  207 (302)
T ss_dssp             CCCCCCSGGGEEEC-------TTSCEEECCCHHHHHHHHHHH---C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHH
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEEECCCCcccccccc---ccccccCChhhcCCeeeccccCCCCCCchhhhHHH
Confidence            37999999999998       889999999999864321100   023457899999999984    3456899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||++++|++|..||.+.+....+..+.......                            .......+..+.+||.+|
T Consensus       208 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~~  259 (302)
T 2j7t_A          208 LGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT----------------------------LLTPSKWSVEFRDFLKIA  259 (302)
T ss_dssp             HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC----------------------------CSSGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcc----------------------------cCCccccCHHHHHHHHHH
Confidence            9999999999999998887666555443321100                            000123578899999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |..||.+|||++++++||||+..
T Consensus       260 l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          260 LDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             SCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             cccChhhCCCHHHHhcChHHhhh
Confidence            99999999999999999999875

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.93  E-value=2.9e-27  Score=202.52  Aligned_cols=135  Identities=25%  Similarity=0.439  Sum_probs=85.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++.........   ....+||..|+|||++.+ ..++.++||||+||++
T Consensus       134 ~H~dl~p~Nili~-------~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  202 (278)
T 3cok_A          134 LHRDLTLSNLLLT-------RNMNIKIADFGLATQLKMPHEK---HYTLCGTPNYISPEIATR-SAHGLESDVWSLGCMF  202 (278)
T ss_dssp             ECSSCCGGGEEEC-------TTCCEEECCCTTCEECC--------------------------------CTHHHHHHHHH
T ss_pred             ecCCCCHHHEEEc-------CCCCEEEEeecceeeccCCCCc---ceeccCCCCcCCcchhcC-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999999876533211   234579999999998864 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+......+..+..                            ..   .......+.++.+||.+||..||
T Consensus       203 ~~l~~g~~p~~~~~~~~~~~~~~~----------------------------~~---~~~~~~~~~~~~~li~~~l~~dp  251 (278)
T 3cok_A          203 YTLLIGRPPFDTDTVKNTLNKVVL----------------------------AD---YEMPSFLSIEAKDLIHQLLRRNP  251 (278)
T ss_dssp             HHHHHSSCSSCCCSCC-----CCS----------------------------SC---CCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHhCCCCCCChhHHHHHHHHhh----------------------------cc---cCCccccCHHHHHHHHHHcccCH
Confidence            999999999977653322221100                            00   01123467899999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++++++||||..
T Consensus       252 ~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          252 ADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             GGSCCHHHHTTSTTTC-
T ss_pred             hhCCCHHHHhcCccccC
Confidence            99999999999999975

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.93  E-value=8.7e-27  Score=203.21  Aligned_cols=149  Identities=18%  Similarity=0.244  Sum_probs=103.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh----CCCCCCchhhHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDIWS   80 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiWS   80 (308)
                      -.||||||+|||++       .++.+||+|||+++.......    .....||..|+|||++.    ....++.++||||
T Consensus       146 i~H~dlkp~Nil~~-------~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s  214 (318)
T 2dyl_A          146 VIHRDVKPSNILLD-------ERGQIKLCDFGISGRLVDDKA----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWS  214 (318)
T ss_dssp             CCCCCCCGGGEEEC-------TTSCEEECCCTTC------------------CCTTCCHHHHC--------CCTHHHHHH
T ss_pred             EEeCCCCHHHEEEC-------CCCCEEEEECCCchhccCCcc----ccccCCCccccChhhcccccccccCCccccchhh
Confidence            47999999999999       889999999999986643321    23457999999999984    2345889999999


Q ss_pred             HHHHHHHHhhCCCCCCCC-CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          81 VGCILAEMISNRPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~-~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      +||++++|++|+.||.+. ...+.+..+......                         .   ......+++++.+||.+
T Consensus       215 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------------~---~~~~~~~~~~l~~li~~  266 (318)
T 2dyl_A          215 LGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP-------------------------L---LPGHMGFSGDFQSFVKD  266 (318)
T ss_dssp             HHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC-------------------------C---CCSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC-------------------------C---CCccCCCCHHHHHHHHH
Confidence            999999999999999774 333444333321100                         0   00112468999999999


Q ss_pred             hcccCCCCCCCHHHHhcCCccccccCCCCCCch
Q psy7274         160 MLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS  192 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~hp~f~~~~~~~~~~~~  192 (308)
                      ||..||.+|||++++++||||+.......+...
T Consensus       267 ~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~~~  299 (318)
T 2dyl_A          267 CLTKDHRKRPKYNKLLEHSFIKRYETLEVDVAS  299 (318)
T ss_dssp             HTCSCTTTSCCHHHHTTSHHHHHHHHSCCCHHH
T ss_pred             HccCChhHCcCHHHHhhCHHHHhcccccchhHH
Confidence            999999999999999999999876444333333

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=1.6e-26  Score=198.99  Aligned_cols=142  Identities=30%  Similarity=0.496  Sum_probs=110.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++.    .+.++.+||+|||++........    .....||..|+|||++.+  .++.++||||+||+
T Consensus       142 i~H~dl~p~NIlv~~----~~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~Di~slG~~  211 (287)
T 2wei_A          142 IVHRDLKPENILLES----KEKDCDIKIIDFGLSTCFQQNTK----MKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVI  211 (287)
T ss_dssp             CCCSCCCGGGEEESC----SSTTCCEEECSTTGGGTBCCCSS----CSCHHHHHTTCCHHHHTT--CCCTHHHHHHHHHH
T ss_pred             eeccCCChhhEEEec----CCCcccEEEeccCcceeecCCCc----cccccCcccccChHHhcC--CCCCchhhHhHHHH
Confidence            379999999999971    11345799999999987654321    344579999999998754  38999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|..||.+.+..+.+..+.........                           ..+..++.++.+||.+||..|
T Consensus       212 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~d  264 (287)
T 2wei_A          212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDL---------------------------PQWRTISDDAKDLIRKMLTFH  264 (287)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS---------------------------GGGTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---------------------------hhhhhcCHHHHHHHHHHcccC
Confidence            99999999999998877666655432111110                           011356889999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |.+|||++++++||||+..
T Consensus       265 p~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          265 PSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             GGGSCCHHHHHHSHHHHHH
T ss_pred             hhhCcCHHHHhcCHHHhcc
Confidence            9999999999999999764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.93  E-value=5.5e-27  Score=205.56  Aligned_cols=151  Identities=25%  Similarity=0.364  Sum_probs=92.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh---CCCCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML---NSKGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~~DiWSl   81 (308)
                      -.||||||+|||++       .++.+||+|||+++.......    .....||..|+|||++.   ....++.++||||+
T Consensus       147 ivH~dlkp~NIll~-------~~~~~kl~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~sl  215 (327)
T 3aln_A          147 IIHRDIKPSNILLD-------RSGNIKLCDFGISGQLVDSIA----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSL  215 (327)
T ss_dssp             CCCSCCCGGGEEEE-------TTTEEEECCCSSSCC----------------------------------CCSHHHHHHH
T ss_pred             EeECCCCHHHEEEc-------CCCCEEEccCCCceecccccc----cccCCCCccccCceeeccccCcCCCCchhhHHHH
Confidence            47999999999998       889999999999987643321    23447999999999973   23458999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHH-HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          82 GCILAEMISNRPIFPGKHYL-DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      ||++++|++|+.||.+.... +.+..+   ..                       .............+++.+.+||.+|
T Consensus       216 G~il~~l~~g~~pf~~~~~~~~~~~~~---~~-----------------------~~~~~~~~~~~~~~~~~l~~li~~~  269 (327)
T 3aln_A          216 GITLYELATGRFPYPKWNSVFDQLTQV---VK-----------------------GDPPQLSNSEEREFSPSFINFVNLC  269 (327)
T ss_dssp             HHHHHHHHHSCCCSSCC-------CCC---CC-----------------------SCCCCCCCCSSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCcchHHHHHHHH---hc-----------------------CCCCCCCCcccccCCHHHHHHHHHH
Confidence            99999999999999765321 111000   00                       0000000111235789999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccccCCCCCCch
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQYYDPADEPVS  192 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~~~~~~~~~~  192 (308)
                      |..||.+|||+.++++||||........+...
T Consensus       270 l~~dp~~Rps~~ell~hp~~~~~~~~~~~~~~  301 (327)
T 3aln_A          270 LTKDESKRPKYKELLKHPFILMYEERAVEVAC  301 (327)
T ss_dssp             TCSSGGGSCCHHHHTTSHHHHHHHHSCCCHHH
T ss_pred             hhCChhhCcCHHHHHhChHHHHhHhhHHHHHH
Confidence            99999999999999999999876554444433

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.93  E-value=2e-26  Score=199.73  Aligned_cols=137  Identities=23%  Similarity=0.340  Sum_probs=110.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........   .....+||..|+|||++.+ ..++.++||||+||++
T Consensus       141 ~H~dl~p~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  209 (303)
T 3a7i_A          141 IHRDIKAANVLLS-------EHGEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITA  209 (303)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECBTTBC---CBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             ccCCCChheEEEC-------CCCCEEEeecccceecCcccc---ccCccCCCcCccCHHHHhc-CCCCchhhhHHHHHHH
Confidence            6999999999999       889999999999987653321   1345689999999999865 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+.........+....  +                            .......+..+.+||.+||..||
T Consensus       210 ~~l~~g~~p~~~~~~~~~~~~~~~~~--~----------------------------~~~~~~~~~~l~~li~~~l~~dp  259 (303)
T 3a7i_A          210 IELARGEPPHSELHPMKVLFLIPKNN--P----------------------------PTLEGNYSKPLKEFVEACLNKEP  259 (303)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHSC--C----------------------------CCCCSSCCHHHHHHHHHHCCSSG
T ss_pred             HHHccCCCCCCCcCHHHHHHHhhcCC--C----------------------------CCCccccCHHHHHHHHHHcCCCh
Confidence            99999999998877655444332210  0                            01123568899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||...
T Consensus       260 ~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          260 SFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             GGSCCHHHHTTCHHHHHH
T ss_pred             hhCcCHHHHhhChhhhcC
Confidence            999999999999999764

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=1.1e-26  Score=205.31  Aligned_cols=154  Identities=25%  Similarity=0.267  Sum_probs=110.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCc-hhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~-~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+++.....     ......||..|+|||++.+...++. ++||||+||+
T Consensus       174 ~H~dl~p~Nil~~-------~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i  241 (348)
T 2pml_X          174 CHRDVKPSNILMD-------KNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGIC  241 (348)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHH
T ss_pred             eecCCChHhEEEc-------CCCcEEEeccccccccccc-----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHH
Confidence            6999999999999       8899999999999876432     1345689999999999876535666 9999999999


Q ss_pred             HHHHhhCCCCCCCCCH-HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHY-LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++|..||.+.+. .+.+..+....... +......        .   ..............++.++.+||.+||+.
T Consensus       242 l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~-~~~~~~~--------~---~~~~~~~~~~~~~~~~~~l~~li~~~L~~  309 (348)
T 2pml_X          242 LYVMFYNVVPFSLKISLVELFNNIRTKNIEY-PLDRNHF--------L---YPLTNKKSTCSNNFLSNEDIDFLKLFLRK  309 (348)
T ss_dssp             HHHHHHSSCSSCCSSCSHHHHHHHTSCCCCC-CCSSSSS--------T---TTTCC--------CCCHHHHHHHHHHCCS
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHhccCcCC-ccchhhh--------h---ccccccccccchhhcCHHHHHHHHHHccC
Confidence            9999999999988766 44444443211100 0000000        0   00000011112246789999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+|||++++++||||+..
T Consensus       310 dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          310 NPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             SGGGSCCHHHHHTSGGGTTC
T ss_pred             ChhhCCCHHHHhcCccccCC
Confidence            99999999999999999763

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.93  E-value=3.5e-27  Score=207.77  Aligned_cols=147  Identities=22%  Similarity=0.334  Sum_probs=86.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    .+.++.+||+|||+++......     ....+||+.|+|||++.+ ..++.++||||+||++
T Consensus       150 vH~dlkp~NIll~~----~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  219 (336)
T 3fhr_A          150 AHRDVKPENLLYTS----KEKDAVLKLTDFGFAKETTQNA-----LQTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIM  219 (336)
T ss_dssp             ECSCCSGGGEEESC----SSTTCCEEECCCTTCEEC----------------------------CHHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEEe----cCCCceEEEeccccceeccccc-----cccCCCCcCccChhhhCC-CCCCchhhHHHHHHHH
Confidence            69999999999971    1125669999999998764322     244588999999999754 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+.........+......                   .....+    ...+..++.++.+||.+||..||
T Consensus       220 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~~~~----~~~~~~~~~~~~~li~~~L~~dP  276 (336)
T 3fhr_A          220 YILLCGFPPFYSNTGQAISPGMKRRIRL-------------------GQYGFP----NPEWSEVSEDAKQLIRLLLKTDP  276 (336)
T ss_dssp             HHHHHSSCCC----------------------------------------CCC----TTTSTTCCHHHHHHHHHHSCSSG
T ss_pred             HHHHHCCCCCCCccchhhhhhHHHhhhc-------------------cccccC----chhhccCCHHHHHHHHHHCCCCh
Confidence            9999999999766543221111100000                   000000    01123578999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccC
Q psy7274         166 HKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~  185 (308)
                      .+|||++++++||||+....
T Consensus       277 ~~Rpt~~ell~hp~~~~~~~  296 (336)
T 3fhr_A          277 TERLTITQFMNHPWINQSMV  296 (336)
T ss_dssp             GGSCCHHHHHHSHHHHTGGG
T ss_pred             hHCcCHHHHhcCcccccccc
Confidence            99999999999999977543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.93  E-value=3.6e-26  Score=199.13  Aligned_cols=139  Identities=22%  Similarity=0.335  Sum_probs=109.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||++........   ......||..|+|||++.+ ..++.++||||+||++
T Consensus       147 ~H~dl~p~Nil~~-------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  215 (314)
T 3com_A          147 IHRDIKAGNILLN-------TEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQE-IGYNCVADIWSLGITA  215 (314)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCCTTCEECBTTBS---CBCCCCSCGGGCCHHHHSS-SCBCTTHHHHHHHHHH
T ss_pred             cCCCcCHHHEEEC-------CCCCEEEeecccchhhhhhcc---ccCccCCCCCccChhhcCC-CCCCccccHHHHHHHH
Confidence            6999999999999       889999999999987643321   1344589999999999865 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+.+.......+......                         ..   ......+..+.+||.+||..||
T Consensus       216 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~~---~~~~~~~~~l~~li~~~l~~dp  267 (314)
T 3com_A          216 IEMAEGKPPYADIHPMRAIFMIPTNPPP-------------------------TF---RKPELWSDNFTDFVKQCLVKSP  267 (314)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHSCCC-------------------------CC---SSGGGSCHHHHHHHHHHTCSCT
T ss_pred             HHHHhCCCCCCCCChHHHHHHHhcCCCc-------------------------cc---CCcccCCHHHHHHHHHHccCCh
Confidence            9999999999887765544433221100                         00   0012357899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||+..
T Consensus       268 ~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          268 EQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             TTSCCHHHHTTSHHHHTC
T ss_pred             hhCcCHHHHHhCHHHhcC
Confidence            999999999999999764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=1.9e-26  Score=198.00  Aligned_cols=137  Identities=13%  Similarity=0.072  Sum_probs=100.3

Q ss_pred             CCCCCCCCCcccCccccc------------cCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCC
Q psy7274           6 PHKRIGVEGALAHPYLEQ------------YYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYT   73 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~------------~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~   73 (308)
                      .||||||+|||++.....            ......+||+|||++......       ....||..|+|||++.+...++
T Consensus       137 vH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~  209 (289)
T 1x8b_A          137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP-------QVEEGDSRFLANEVLQENYTHL  209 (289)
T ss_dssp             ECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTCCTTH
T ss_pred             eecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc-------cccCCCccccChhHhcCCCCCC
Confidence            699999999999721100            013447999999999876542       2236899999999987655677


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      .++||||+||++++|++|.+++.....   ...+...                              ........+++++
T Consensus       210 ~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~------------------------------~~~~~~~~~~~~~  256 (289)
T 1x8b_A          210 PKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQG------------------------------RLPRIPQVLSQEF  256 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHTT------------------------------CCCCCSSCCCHHH
T ss_pred             chhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHcC------------------------------CCCCCCcccCHHH
Confidence            899999999999999999987754422   1111110                              0011223578999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      .+||.+||..||.+|||++++++||||..
T Consensus       257 ~~li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          257 TELLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             HHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence            99999999999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.93  E-value=3.8e-26  Score=197.07  Aligned_cols=140  Identities=25%  Similarity=0.384  Sum_probs=104.4

Q ss_pred             CCCCCCCCCcccCccccccCC-CCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-CCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYD-PADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~-~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWSlG~   83 (308)
                      .||||||+||+++       . ++.+||+|||+++.......   ......||..|+|||++.+. ..++.++||||+||
T Consensus       144 ~H~dl~p~Nil~~-------~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~  213 (295)
T 2clq_A          144 VHRDIKGDNVLIN-------TYSGVLKISDFGTSKRLAGINP---CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC  213 (295)
T ss_dssp             ECCCCSGGGEEEE-------TTTCCEEECCTTTCEESCC--------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHH
T ss_pred             EccCCChhhEEEE-------CCCCCEEEeecccccccCCCCC---cccccCCCccccChhhhcCCCCCCCcHHHHHHHHH
Confidence            6999999999998       5 88999999999987643221   12445899999999998643 23789999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|+.||.+................                    .        ..+...++.++.+||.+||..
T Consensus       214 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------------------~--------~~~~~~~~~~~~~li~~~l~~  265 (295)
T 2clq_A          214 TIIEMATGKPPFYELGEPQAAMFKVGMFKV--------------------H--------PEIPESMSAEAKAFILKCFEP  265 (295)
T ss_dssp             HHHHHHHTSCTTGGGSSHHHHHHHHHHHCC--------------------C--------CCCCTTSCHHHHHHHHHTTCS
T ss_pred             HHHHHHHCCCCccCCCchhHHHHhhccccc--------------------c--------ccccccCCHHHHHHHHHHccC
Confidence            999999999999754332211111100000                    0        011235689999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+|||++++++||||+..
T Consensus       266 dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          266 DPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             STTTSCCHHHHHTSGGGCC-
T ss_pred             ChhhCCCHHHHhcChhhhhc
Confidence            99999999999999999753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=2.3e-26  Score=196.96  Aligned_cols=137  Identities=24%  Similarity=0.407  Sum_probs=108.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......   .......||..|+|||++.+ ..++.++||||+||+
T Consensus       137 ivH~dl~p~NIl~~-------~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  205 (279)
T 2w5a_A          137 VLHRDLKPANVFLD-------GKQNVKLGDFGLARILNHDT---SFAKTFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCL  205 (279)
T ss_dssp             -CCCCCSGGGEEEC-------SSSCEEECCCCHHHHC---C---HHHHHHHSCCTTCCHHHHHC-C-CCHHHHHHHHHHH
T ss_pred             eEEeccchhhEEEc-------CCCCEEEecCchheeecccc---ccccccCCCccccChHHhcc-CCCCchhhHHHHHHH
Confidence            47999999999999       88999999999998764321   11234578999999999875 458999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+..+....+.....                              ..+....+.++.++|.+||..|
T Consensus       206 l~~l~~g~~p~~~~~~~~~~~~i~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~~  255 (279)
T 2w5a_A          206 LYELCALMPPFTAFSQKELAGKIREGKF------------------------------RRIPYRYSDELNEIITRMLNLK  255 (279)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCC------------------------------CCCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCcccCHHHHHHHHhhccc------------------------------ccCCcccCHHHHHHHHHHcCCC
Confidence            9999999999988876655554433211                              0112346789999999999999


Q ss_pred             CCCCCCHHHHhcCCcccc
Q psy7274         165 PHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~  182 (308)
                      |.+|||++++++|+|+..
T Consensus       256 p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          256 DYHRPSVEEILENPLILE  273 (279)
T ss_dssp             GGGSCCHHHHHTSTTCCG
T ss_pred             cccCCCHHHHHhChhhhh
Confidence            999999999999999965

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.93  E-value=8.3e-27  Score=212.28  Aligned_cols=151  Identities=25%  Similarity=0.315  Sum_probs=100.1

Q ss_pred             CCCCCCCCCcccCcccc------ccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhC------CCCC
Q psy7274           6 PHKRIGVEGALAHPYLE------QYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLN------SKGY   72 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~------~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~------~~~~   72 (308)
                      .||||||+|||++....      ....++.+||+|||+|+........ .......+||+.|+|||++.+      ...+
T Consensus       137 vHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  216 (434)
T 2rio_A          137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRL  216 (434)
T ss_dssp             ECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCC
T ss_pred             cccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCc
Confidence            69999999999972110      0113458999999999977543211 111345689999999999864      2458


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCCh
Q psy7274          73 TKSIDIWSVGCILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP  151 (308)
Q Consensus        73 ~~~~DiWSlG~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  151 (308)
                      +.++||||+||+++||++ |+.||.+.....  ..+.......                    +.....    ....+++
T Consensus       217 ~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~--------------------~~~~~~----~~~~~~~  270 (434)
T 2rio_A          217 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSL--------------------DEMKCL----HDRSLIA  270 (434)
T ss_dssp             CTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCC--------------------CCCTTC----CCHHHHH
T ss_pred             chhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCc--------------------cccccc----ccccchH
Confidence            999999999999999998 899997654332  1121111000                    000000    0012357


Q ss_pred             hHHHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       152 ~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      ++.+||.+||+.||.+|||+.++++||||..
T Consensus       271 ~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          271 EATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            8999999999999999999999999999954

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.93  E-value=2.8e-26  Score=200.60  Aligned_cols=139  Identities=18%  Similarity=0.244  Sum_probs=98.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......... ......+|..|+|||++.+ ..++.++||||+||+
T Consensus       158 ivH~Dikp~NIli~-------~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  228 (323)
T 3qup_A          158 FIHRDLAARNCMLA-------EDMTVCVADFGLSRKIYSGDYYR-QGCASKLPVKWLALESLAD-NLYTVHSDVWAFGVT  228 (323)
T ss_dssp             CCCSCCSGGGEEEC-------TTSCEEECCCCC------------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             cccCCCCcceEEEc-------CCCCEEEeecccccccccccccc-ccccccCcccccCchhhcC-CCCCCccchhhHHHH
Confidence            37999999999999       88999999999998764432111 1234466789999999875 459999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+.+..+....+......                              ...+..++++.+||.+||..
T Consensus       229 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~  278 (323)
T 3qup_A          229 MWEIMTRGQTPYAGIENAEIYNYLIGGNRL------------------------------KQPPECMEEVYDLMYQCWSA  278 (323)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHhCCCCCccccChHHHHHHHhcCCCC------------------------------CCCCccCHHHHHHHHHHccC
Confidence            999999 89999987766555544321110                              11235678999999999999


Q ss_pred             CCCCCCC-------HHHHhcCCcccc
Q psy7274         164 NPHKRIG-------VEDALAHPYLEQ  182 (308)
Q Consensus       164 dP~~R~t-------~~eil~hp~f~~  182 (308)
                      ||.+|||       ++++++|+|+..
T Consensus       279 dp~~Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          279 DPKQRPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHC-----
T ss_pred             ChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence            9999999       778999999965

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.93  E-value=2e-26  Score=201.58  Aligned_cols=130  Identities=22%  Similarity=0.389  Sum_probs=104.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.      .++.+||+|||+++......     .....||..|+|||++.+...++.++||||+||++
T Consensus       171 vH~Dlkp~NIll~~------~~~~~kL~Dfg~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il  239 (320)
T 3a99_A          171 LHRDIKDENILIDL------NRGELKLIDFGSGALLKDTV-----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL  239 (320)
T ss_dssp             ECCCCSGGGEEEET------TTTEEEECCCTTCEECCSSC-----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHH
T ss_pred             EeCCCCHHHEEEeC------CCCCEEEeeCcccccccccc-----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHH
Confidence            69999999999972      46889999999998765321     34568999999999987655457899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+...      +..  +.                             ......+++++.+||.+||..||
T Consensus       240 ~el~~g~~pf~~~~~------~~~--~~-----------------------------~~~~~~~~~~~~~li~~~l~~dp  282 (320)
T 3a99_A          240 YDMVCGDIPFEHDEE------IIR--GQ-----------------------------VFFRQRVSSECQHLIRWCLALRP  282 (320)
T ss_dssp             HHHHHSSCSCCSHHH------HHH--CC-----------------------------CCCSSCCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHCCCCCCChhh------hhc--cc-----------------------------ccccccCCHHHHHHHHHHccCCh
Confidence            999999999965321      110  00                             00123568999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||+..
T Consensus       283 ~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          283 SDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             GGSCCHHHHHTSGGGSSC
T ss_pred             hhCcCHHHHhcCHhhcCc
Confidence            999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.93  E-value=8.2e-26  Score=196.69  Aligned_cols=132  Identities=18%  Similarity=0.230  Sum_probs=96.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......   .....+||..|+|||++.+ ..++.++||||+||+
T Consensus       160 ivH~Dikp~NIll~-------~~~~~kL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  228 (309)
T 3p86_A          160 IVHRNLKSPNLLVD-------KKYTVKVCDFGLSRLKASTFL---SSKSAAGTPEWMAPEVLRD-EPSNEKSDVYSFGVI  228 (309)
T ss_dssp             CCCTTCCGGGEEEC-------TTCCEEECCCC--------------------CCTTSCHHHHTT-CCCCTTHHHHHHHHH
T ss_pred             EECCCCChhhEEEe-------CCCcEEECCCCCCcccccccc---ccccCCCCccccChhhhcC-CCCCchhhHHHHHHH
Confidence            47999999999999       889999999999986543211   1245689999999999865 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+..+....+......+                             .....+++++.+||.+||..|
T Consensus       229 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~d  279 (309)
T 3p86_A          229 LWELATLQQPWGNLNPAQVVAAVGFKCKRL-----------------------------EIPRNLNPQVAAIIEGCWTNE  279 (309)
T ss_dssp             HHHHHHCCCTTTTSCHHHHHHHHHHSCCCC-----------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-----------------------------CCCccCCHHHHHHHHHHccCC
Confidence            999999999998887666554443211110                             112356899999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       280 P~~Rps~~~ll~  291 (309)
T 3p86_A          280 PWKRPSFATIMD  291 (309)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999986

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=6.1e-26  Score=202.37  Aligned_cols=133  Identities=19%  Similarity=0.249  Sum_probs=104.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......... ......+|..|+|||++.+ ..++.++||||+||++
T Consensus       225 vHrDlkp~NIll~-------~~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il  295 (370)
T 2psq_A          225 IHRDLAARNVLVT-------ENNVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLM  295 (370)
T ss_dssp             ECSCCCGGGEEEC-------TTCCEEECCCSSCEETTCCCTTC-TTTTTTSCGGGCCHHHHHT-CCCCHHHHHHHHHHHH
T ss_pred             eccccchhhEEEC-------CCCCEEEccccCCcccCccccee-cccCCCcccceECHhHhcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       89999999999998765432211 1244567889999999875 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |..||.+....+....+......                              .....++.++.+||.+||..|
T Consensus       296 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~d  345 (370)
T 2psq_A          296 WEIFTLGGSPYPGIPVEELFKLLKEGHRM------------------------------DKPANCTNELYMMMRDCWHAV  345 (370)
T ss_dssp             HHHHTTSCCSSTTCCGGGHHHHHHTTCCC------------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHhcCCCC------------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            99999 99999887755544433221100                              112356789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.|++++
T Consensus       346 P~~Rpt~~ell~~  358 (370)
T 2psq_A          346 PSQRPTFKQLVED  358 (370)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999854

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.93  E-value=6e-26  Score=197.71  Aligned_cols=141  Identities=24%  Similarity=0.348  Sum_probs=99.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC----------CCCCc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----------KGYTK   74 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----------~~~~~   74 (308)
                      -.||||||+|||++        ++.+||+|||+++........ ......+||..|+|||++.+.          ..++.
T Consensus       148 ivH~dlkp~NIl~~--------~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~  218 (313)
T 3cek_A          148 IVHSDLKPANFLIV--------DGMLKLIDFGIANQMQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP  218 (313)
T ss_dssp             CCCCCCCGGGEEEE--------TTEEEECCCSSSCC---------------CCGGGCCHHHHTTCC----------CCCH
T ss_pred             ceecCCCcccEEEE--------CCeEEEeeccccccccCcccc-ccccCCCCCCCcCCHHHHhhcccccccccccccCCc
Confidence            36999999999996        378999999999876443211 112345799999999998641          35889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          75 SIDIWSVGCILAEMISNRPIFPGKHYL-DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        75 ~~DiWSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      ++||||+||++++|++|+.||.+.... ..+..+...   .                       ..   .......+.++
T Consensus       219 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~---~-----------------------~~---~~~~~~~~~~l  269 (313)
T 3cek_A          219 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP---N-----------------------HE---IEFPDIPEKDL  269 (313)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCT---T-----------------------SC---CCCCCCSCHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhc---c-----------------------cc---cCCcccchHHH
Confidence            999999999999999999999765422 222211100   0                       00   01112346889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      .+||.+||..||.+|||++++++||||+..
T Consensus       270 ~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          270 QDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             HHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence            999999999999999999999999999764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.93  E-value=1.2e-26  Score=203.17  Aligned_cols=156  Identities=20%  Similarity=0.190  Sum_probs=104.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC----CCCCchhhHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS----KGYTKSIDIWS   80 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiWS   80 (308)
                      -.||||||+|||++       .++.+||+|||+|+........ ......+||..|+|||++.+.    ..++.++||||
T Consensus       152 ivH~Dlkp~Nill~-------~~~~~kL~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws  223 (322)
T 3soc_A          152 ISHRDIKSKNVLLK-------NNLTACIADFGLALKFEAGKSA-GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYA  223 (322)
T ss_dssp             EECSCCSGGGEEEC-------TTCCEEECCCTTCEEECTTSCC-CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHH
T ss_pred             EEeCCCChHhEEEC-------CCCeEEEccCCcccccccccCc-cccccCccCccccCHhhcccccccCcCCCccchhHH
Confidence            36999999999999       8899999999999876543322 123456899999999998753    23556889999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||++|||++|+.||.+..............+.+....+....        ......+..+-.......+.++.+||.+|
T Consensus       224 lG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~c  295 (322)
T 3soc_A          224 MGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV--------VHKKKRPVLRDYWQKHAGMAMLCETIEEC  295 (322)
T ss_dssp             HHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHH--------TTSCCCCCCCGGGGSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhh--------hcccCCCCccccccccchHHHHHHHHHHH
Confidence            9999999999999998765432222222223333333322111        00111111110000111235599999999


Q ss_pred             cccCCCCCCCHHHHhc
Q psy7274         161 LTFNPHKRIGVEDALA  176 (308)
Q Consensus       161 L~~dP~~R~t~~eil~  176 (308)
                      |+.||.+|||++++++
T Consensus       296 l~~dP~~Rps~~ell~  311 (322)
T 3soc_A          296 WDHDAEARLSAGCVGE  311 (322)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhhCcCHHHHHH
Confidence            9999999999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.93  E-value=4.4e-26  Score=199.74  Aligned_cols=134  Identities=16%  Similarity=0.232  Sum_probs=102.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+......... ..+...||..|+|||++.+ ..++.++||||+||+
T Consensus       136 ivH~Dikp~Nil~~-------~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~  206 (325)
T 3kex_A          136 MVHRNLAARNVLLK-------SPSQVQVADFGVADLLPPDDKQL-LYSEAKTPIKWMALESIHF-GKYTHQSDVWSYGVT  206 (325)
T ss_dssp             CCCSCCSSTTEEES-------SSSCEEECSCSGGGGSCCCTTCC-C-----CCTTTSCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             CCCCccchheEEEC-------CCCeEEECCCCcccccCcccccc-cccCCCCcccccChHHhcc-CCCChhhHhHHhHHH
Confidence            36999999999999       88999999999999875443221 2345678889999999875 459999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|+|++ |+.||.+....+....+......+                              .....+.++.++|.+||..
T Consensus       207 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~  256 (325)
T 3kex_A          207 VWELMTFGAEPYAGLRLAEVPDLLEKGERLA------------------------------QPQICTIDVYMVMVKCWMI  256 (325)
T ss_dssp             HHHHHTTSCCTTTTSCTTHHHHHHHTTCBCC------------------------------CCTTBCTTTTHHHHHHTCS
T ss_pred             HHHHHhCCCCCccccCHHHHHHHHHcCCCCC------------------------------CCCcCcHHHHHHHHHHcCC
Confidence            999999 999998876555444433211100                              1123567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||+.++++|
T Consensus       257 dp~~Rps~~el~~~  270 (325)
T 3kex_A          257 DENIRPTFKELANE  270 (325)
T ss_dssp             CTTTSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999876

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.93  E-value=4.7e-26  Score=196.94  Aligned_cols=141  Identities=23%  Similarity=0.335  Sum_probs=96.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC-----------CCCCccCcccccccchhhHhhCCCCCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD-----------HTGFLTEYVATRWYRAPEIMLNSKGYT   73 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~l~~~~~~~   73 (308)
                      -.||||||+|||++       .++.+||+|||+++.......           ........+||..|+|||++.+...++
T Consensus       137 i~H~dlkp~Nil~~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  209 (303)
T 1zy4_A          137 IIHRDLKPMNIFID-------ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN  209 (303)
T ss_dssp             CCCSCCCGGGEEEC-------TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCC
T ss_pred             eecccCCHHhEEEc-------CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCc
Confidence            37999999999999       889999999999987643210           011234568999999999987655689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCC-CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChh
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN  152 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~-~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  152 (308)
                      .++||||+||++++|++   ||... +....+..+.......                    +       .......+..
T Consensus       210 ~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~--------------------~-------~~~~~~~~~~  259 (303)
T 1zy4_A          210 EKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEF--------------------P-------PDFDDNKMKV  259 (303)
T ss_dssp             THHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCC--------------------C-------TTCCTTTSHH
T ss_pred             chhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcccccccc--------------------C-------ccccccchHH
Confidence            99999999999999998   44322 2222222221110000                    0       1122345678


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       153 ~~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      +.++|.+||+.||.+|||++++++||||+.
T Consensus       260 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             HHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            999999999999999999999999999965

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=2.8e-26  Score=204.37  Aligned_cols=137  Identities=20%  Similarity=0.190  Sum_probs=107.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCC---CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPA---DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~---~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      -.||||||+|||++       .++   .+||+|||+|+........ ......+||+.|+|||++.+ ..++.++||||+
T Consensus       202 ivHrDlkp~NIll~-------~~~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvwsl  272 (367)
T 3l9p_A          202 FIHRDIAARNCLLT-------CPGPGRVAKIGDFGMARDIYRAGYY-RKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSF  272 (367)
T ss_dssp             CCCSCCCGGGEEES-------CSSTTCCEEECCCHHHHHHHHHSSC-TTCCGGGSCGGGCCHHHHHH-CCCCHHHHHHHH
T ss_pred             eeCCCCChhhEEEe-------cCCCCceEEECCCcccccccccccc-ccCCCcCCcccEECHHHhcC-CCCCcHHHHHHH
Confidence            37999999999998       444   4999999999854322111 11234578999999999876 459999999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          82 GCILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        82 G~il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      ||+++||++ |..||.+.+..+.+..+......+                              ....++..+.+||.+|
T Consensus       273 G~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~~  322 (367)
T 3l9p_A          273 GVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD------------------------------PPKNCPGPVYRIMTQC  322 (367)
T ss_dssp             HHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCccCCHHHHHHHHHH
Confidence            999999998 999999988776666554321111                              1124678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCcc
Q psy7274         161 LTFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f  180 (308)
                      |+.||.+|||++++++|.++
T Consensus       323 l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          323 WQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             TCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHHHH
Confidence            99999999999999998776

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.92  E-value=2e-25  Score=199.88  Aligned_cols=133  Identities=20%  Similarity=0.245  Sum_probs=106.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......... ......||..|+|||++.+ ..++.++||||+||++
T Consensus       213 vH~Dlkp~NIll~-------~~~~~kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il  283 (382)
T 3tt0_A          213 IHRDLAARNVLVT-------EDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLL  283 (382)
T ss_dssp             CCSCCCGGGEEEC-------TTCCEEECSCSCCCCSSCCCTTC-CCTTCCCGGGGSCHHHHHS-CCCCHHHHHHHHHHHH
T ss_pred             ecCCCCcceEEEc-------CCCcEEEcccCcccccccccccc-cccCCCCCcceeCHHHhcC-CCCCchhHHHHHHHHH
Confidence            7999999999999       88999999999998765432211 1344577899999999875 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.+..+....+......                              .....++.++.+||.+||..|
T Consensus       284 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~d  333 (382)
T 3tt0_A          284 WEIFTLGGSPYPGVPVEELFKLLKEGHRM------------------------------DKPSNCTNELYMMMRDCWHAV  333 (382)
T ss_dssp             HHHHTTSCCSSTTCCHHHHHHHHHTTCCC------------------------------CCCSSCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCccCCHHHHHHHHHHcCCC
Confidence            99999 99999988766655544322111                              011356789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+++++++
T Consensus       334 P~~Rps~~ell~~  346 (382)
T 3tt0_A          334 PSQRPTFKQLVED  346 (382)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999865

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.92  E-value=3.8e-26  Score=200.32  Aligned_cols=133  Identities=19%  Similarity=0.261  Sum_probs=102.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......... ......||..|+|||++.+ ..++.++||||+||++
T Consensus       139 vH~Dikp~NIll~-------~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  209 (327)
T 3poz_A          139 VHRDLAARNVLVK-------TPQHVKITDFGLAKLLGAEEKEY-HAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTV  209 (327)
T ss_dssp             CCSCCCGGGEEEE-------ETTEEEECCTTHHHHHTTTCC--------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             eCCCCChheEEEC-------CCCCEEEccCcceeEccCCcccc-cccCCCccccccChHHhcc-CCCCchhhhhhhHHHH
Confidence            7999999999998       88999999999998765433221 1234567889999999876 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |+.||.+.+.......+......+                              ..+..+.++.+++.+||+.|
T Consensus       210 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~  259 (327)
T 3poz_A          210 WELMTFGSKPYDGIPASEISSILEKGERLP------------------------------QPPICTIDVYMIMVKCWMID  259 (327)
T ss_dssp             HHHHTTSCCTTTTCCGGGHHHHHHTTCCCC------------------------------CCTTBCHHHHHHHHHHTCSC
T ss_pred             HHHHhcCCCCccCCCHHHHHHHHHcCCCCC------------------------------CCccCCHHHHHHHHHHcCCC
Confidence            99999 999998876554443332211111                              11345789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.+++++
T Consensus       260 p~~Rps~~ell~~  272 (327)
T 3poz_A          260 ADSRPKFRELIIE  272 (327)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCCCHHHHHHH
Confidence            9999999999865

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.92  E-value=1e-25  Score=197.49  Aligned_cols=133  Identities=17%  Similarity=0.232  Sum_probs=103.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+................+|..|+|||++.+ ..++.++||||+||++
T Consensus       173 vH~Dlkp~NIll~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  244 (325)
T 3kul_A          173 VHRDLAARNVLVD-------SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF-RTFSSASDVWSFGVVM  244 (325)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             eCCCCCcceEEEC-------CCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       8999999999999977543322222334456788999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+....+....+......+.                              ...+++.+.+||.+||..|
T Consensus       245 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~l~~li~~~l~~d  294 (325)
T 3kul_A          245 WEVLAYGERPYWNMTNRDVISSVEEGYRLPA------------------------------PMGCPHALHQLMLDCWHKD  294 (325)
T ss_dssp             HHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC------------------------------CTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHcCCCCCcccCCHHHHHHHHHcCCCCCC------------------------------CCCcCHHHHHHHHHHccCC
Confidence            99999 9999998887766665543222111                              1246789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       295 p~~Rps~~eil~  306 (325)
T 3kul_A          295 RAQRPRFSQIVS  306 (325)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.92  E-value=8.9e-26  Score=200.24  Aligned_cols=134  Identities=22%  Similarity=0.302  Sum_probs=103.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........ .......||..|+|||++.+ ..++.++||||+||++
T Consensus       215 vH~Dikp~NIll~-------~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  285 (359)
T 3vhe_A          215 IHRDLAARNILLS-------EKNVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLL  285 (359)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCGGGSCTTSCTTC-EEC--CEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEEc-------CCCcEEEEeccceeeecccccc-hhccccCCCceeEChhhhcC-CCCCchhhhhhHHHHH
Confidence            7999999999998       8899999999999876433221 12345678999999999875 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+....+.+.........+                             ......++++.++|.+||..|
T Consensus       286 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~d  336 (359)
T 3vhe_A          286 WEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----------------------------RAPDYTTPEMYQTMLDCWHGE  336 (359)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHHTCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCCCCccchhHHHHHHHHcCCCC-----------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            99998 999998876544433332211100                             011246789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||++++++|
T Consensus       337 P~~Rps~~ell~~  349 (359)
T 3vhe_A          337 PSQRPTFSELVEH  349 (359)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCCCHHHHHHH
Confidence            9999999999876

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.92  E-value=4.3e-25  Score=190.74  Aligned_cols=137  Identities=11%  Similarity=0.074  Sum_probs=102.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCC-----ceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPAD-----EPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSI   76 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~-----~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~   76 (308)
                      .||||||+|||++       .++.     +||+|||+|+.........    ......+||..|+|||++.+ ..++.++
T Consensus       128 vH~Dlkp~NIl~~-------~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~  199 (298)
T 1csn_A          128 VYRDIKPDNFLIG-------RPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRD  199 (298)
T ss_dssp             ECCCCCGGGEEEC-------CSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHH
T ss_pred             ecCCCCHHHEEec-------cCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcC-CCCChHH
Confidence            6999999999998       4444     9999999998765432211    11345689999999999865 5589999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          77 DIWSVGCILAEMISNRPIFPGKH---YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        77 DiWSlG~il~ell~g~~pf~~~~---~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      ||||+||++++|++|+.||.+.+   ....+..+......++.                          ....+.+++++
T Consensus       200 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l  253 (298)
T 1csn_A          200 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL--------------------------RELCAGFPEEF  253 (298)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH--------------------------HHHTTTSCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH--------------------------HHHHhhCcHHH
Confidence            99999999999999999998743   33333333322111111                          12233568999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~  176 (308)
                      .+||.+||..||.+|||++++++
T Consensus       254 ~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          254 YKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCcccCCCHHHHHH
Confidence            99999999999999999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.92  E-value=9.5e-26  Score=197.01  Aligned_cols=149  Identities=17%  Similarity=0.277  Sum_probs=103.4

Q ss_pred             CCCCCCCCCccc----CccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC-------CCCCCc
Q psy7274           6 PHKRIGVEGALA----HPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-------SKGYTK   74 (308)
Q Consensus         6 ~HrDlKp~Nili----~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~   74 (308)
                      .||||||+|||+    +       .++.+||+|||+|+.......    ....+||..|+|||++..       ...++.
T Consensus       134 vH~Dlkp~NIll~~~~~-------~~~~~kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  202 (319)
T 4euu_A          134 VHRNIKPGNIMRVIGED-------GQSVYKLTDFGAARELEDDEQ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGA  202 (319)
T ss_dssp             ECSCCSGGGEEEEECTT-------SCEEEEECCCTTCEECCTTCC----BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCT
T ss_pred             ecCCCCHHHEEEeccCC-------CCceEEEccCCCceecCCCCc----eeecccCCCccCHHHhhhccccccccCCCCc
Confidence            599999999998    5       677899999999987754332    345689999999999862       356899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcc-------
Q psy7274          75 SIDIWSVGCILAEMISNRPIFPGKHY----LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE-------  143 (308)
Q Consensus        75 ~~DiWSlG~il~ell~g~~pf~~~~~----~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  143 (308)
                      ++||||+||++|||++|+.||.+...    .+.+..+...   .++..+..+...          ......|.       
T Consensus       203 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~----------~~~~~~~~~~~~~~~  269 (319)
T 4euu_A          203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG---KPSGAISGVQKA----------ENGPIDWSGDMPVSC  269 (319)
T ss_dssp             THHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH---CCTTCCEEEECS----------TTCCEEEESSCCTTC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC---CCcccchhhhcc----------cCCccccCccCCccc
Confidence            99999999999999999999965332    3333333321   111111110000          00000010       


Q ss_pred             ccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcCC
Q psy7274         144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHP  178 (308)
Q Consensus       144 ~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp  178 (308)
                      .+....+..+.+||.+||+.||.+|||++|+|+||
T Consensus       270 ~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          270 SLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             SSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             ccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            11123456789999999999999999999999987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.92  E-value=1.9e-25  Score=193.03  Aligned_cols=141  Identities=17%  Similarity=0.197  Sum_probs=101.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+........  .....+||+.|+|||++.+ ..++.++||||+||+
T Consensus       132 i~H~Dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~  201 (294)
T 4eqm_A          132 IVHRDIKPQNILID-------SNKTLKIFDFGIAKALSETSLT--QTNHVLGTVQYFSPEQAKG-EATDECTDIYSIGIV  201 (294)
T ss_dssp             CCCCCCCGGGEEEC-------TTSCEEECCCSSSTTC---------------CCSSCCHHHHHT-CCCCTTHHHHHHHHH
T ss_pred             cccCCCCHHHEEEC-------CCCCEEEEeCCCcccccccccc--ccCccccCccccCHhHhcC-CCCCchHhHHHHHHH
Confidence            36999999999999       8899999999999876533211  1344679999999999875 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+............ .+..                         .....+.+++.+.++|.+||..|
T Consensus       202 l~~ll~g~~pf~~~~~~~~~~~~~~~~-~~~~-------------------------~~~~~~~~~~~l~~li~~~l~~d  255 (294)
T 4eqm_A          202 LYEMLVGEPPFNGETAVSIAIKHIQDS-VPNV-------------------------TTDVRKDIPQSLSNVILRATEKD  255 (294)
T ss_dssp             HHHHHHSSCSSCSSCHHHHHHHHHSSC-CCCH-------------------------HHHSCTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHhhcc-CCCc-------------------------chhcccCCCHHHHHHHHHHhcCC
Confidence            999999999999887665543332211 0100                         01123457899999999999999


Q ss_pred             CCCCCCHHHHhcCCccc
Q psy7274         165 PHKRIGVEDALAHPYLE  181 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~  181 (308)
                      |.+||+..+.+.+.|..
T Consensus       256 p~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          256 KANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             GGGSCSSHHHHHHHHHT
T ss_pred             HhHccccHHHHHHHHHH
Confidence            99999666666666554

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.92  E-value=2.6e-25  Score=193.56  Aligned_cols=130  Identities=23%  Similarity=0.367  Sum_probs=103.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++.      .++.+||+|||+++......     .....||..|+|||++.+...++.++||||+||++
T Consensus       161 ~H~dlkp~Nil~~~------~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  229 (312)
T 2iwi_A          161 VHRDIKDENILIDL------RRGCAKLIDFGSGALLHDEP-----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILL  229 (312)
T ss_dssp             ECCCCSGGGEEEET------TTTEEEECCCSSCEECCSSC-----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHH
T ss_pred             eecCCChhhEEEeC------CCCeEEEEEcchhhhcccCc-----ccccCCcccccCceeeecCCCCCccchHHHHHHHH
Confidence            69999999999972      57889999999998765432     34567999999999987655445699999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||.+...      +...                       .        ..+...++..+.+||.+||..||
T Consensus       230 ~~l~~g~~pf~~~~~------~~~~-----------------------~--------~~~~~~~~~~~~~li~~~l~~~p  272 (312)
T 2iwi_A          230 YDMVCGDIPFERDQE------ILEA-----------------------E--------LHFPAHVSPDCCALIRRCLAPKP  272 (312)
T ss_dssp             HHHHHSSCSCCSHHH------HHHT-----------------------C--------CCCCTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCCCChHH------Hhhh-----------------------c--------cCCcccCCHHHHHHHHHHccCCh
Confidence            999999999965321      1100                       0        01123568899999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++++++||||+..
T Consensus       273 ~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          273 SSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             TTSCCHHHHHHSTTTCC-
T ss_pred             hhCcCHHHHhcChhhcCc
Confidence            999999999999999764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.92  E-value=1.3e-25  Score=196.92  Aligned_cols=132  Identities=19%  Similarity=0.268  Sum_probs=96.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......... ......||..|+|||++.+ ..++.++||||+||++
T Consensus       139 vH~Dikp~NIl~~-------~~~~~kL~DfG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  209 (327)
T 3lzb_A          139 VHRDLAARNVLVK-------TPQHVKITDFGLAKLLGAEEKEY-HAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTV  209 (327)
T ss_dssp             CCSCCCGGGEEEE-------ETTEEEECCTTC-----------------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEc-------CCCCEEEccCcceeEccCccccc-cccCCCccccccCHHHHcC-CCCChHHHHHHHHHHH
Confidence            6999999999998       88999999999998765432211 1234567889999999875 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++ |..||.+....+....+......+                              ..+..+.++.++|.+||..|
T Consensus       210 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~d  259 (327)
T 3lzb_A          210 WELMTFGSKPYDGIPASEISSILEKGERLP------------------------------QPPICTIDVYMIMRKCWMID  259 (327)
T ss_dssp             HHHHTTSCCTTTTCCGGGHHHHHHTTCCCC------------------------------CCTTBCHHHHHHHHHHTCSS
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCccCCHHHHHHHHHHcCCC
Confidence            99999 999998877655444433211111                              11346789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       260 p~~Rps~~ell~  271 (327)
T 3lzb_A          260 ADSRPKFRELII  271 (327)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999985

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.92  E-value=3.3e-25  Score=190.94  Aligned_cols=139  Identities=19%  Similarity=0.259  Sum_probs=96.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC--CCCCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiWSlG   82 (308)
                      -.||||||+|||++       .++.+||+|||+++....... ........||..|+|||++..  ...++.++||||+|
T Consensus       141 i~H~Dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  212 (289)
T 3og7_A          141 IIHRDLKSNNIFLH-------EDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG  212 (289)
T ss_dssp             CCCSCCCGGGEEEE-------TTTEEEECCCC-------------------CCCTTCCHHHHC----CCSCHHHHHHHHH
T ss_pred             cccccCccceEEEC-------CCCCEEEccceeccccccccc-cccccccCCCccccCchhhcccCCCCCCcccchHHHH
Confidence            36999999999999       889999999999986543211 112345689999999999852  34588899999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|+.||.+....+.+..+......+                         ..+......+++.+.+||.+||.
T Consensus       213 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~~li~~~l~  267 (289)
T 3og7_A          213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-------------------------PDLSKVRSNCPKRMKRLMAECLK  267 (289)
T ss_dssp             HHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC-------------------------CCTTSSCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCccccchHHHHHHHhcccccC-------------------------cchhhccccCCHHHHHHHHHHcc
Confidence            99999999999998876655554443321111                         11122234678999999999999


Q ss_pred             cCCCCCCCHHHHhc
Q psy7274         163 FNPHKRIGVEDALA  176 (308)
Q Consensus       163 ~dP~~R~t~~eil~  176 (308)
                      .||.+|||++++++
T Consensus       268 ~~p~~Rps~~ell~  281 (289)
T 3og7_A          268 KKRDERPSFPRILA  281 (289)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999874

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.92  E-value=4.3e-25  Score=190.45  Aligned_cols=137  Identities=16%  Similarity=0.099  Sum_probs=101.6

Q ss_pred             CCCCCCCCCccc---CccccccCCCCCceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchhhH
Q psy7274           6 PHKRIGVEGALA---HPYLEQYYDPADEPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSIDI   78 (308)
Q Consensus         6 ~HrDlKp~Nili---~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~Di   78 (308)
                      .||||||+|||+   +       .++.+||+|||+|+.........    .......||..|+|||++.+ ..++.++||
T Consensus       127 vH~Dlkp~NIl~~~~~-------~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  198 (296)
T 4hgt_A          127 IHRDVKPDNFLMGLGK-------KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDL  198 (296)
T ss_dssp             ECSCCSGGGEEECCGG-------GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT-CCCCHHHHH
T ss_pred             ecCCCCHHHeeeeccC-------CCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcC-CCCCchhHH
Confidence            699999999999   5       78899999999998765432211    11245689999999999875 459999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCHH---HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHH
Q psy7274          79 WSVGCILAEMISNRPIFPGKHYL---DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALD  155 (308)
Q Consensus        79 WSlG~il~ell~g~~pf~~~~~~---~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  155 (308)
                      ||+||++++|++|+.||.+.+..   ..+..+.......+                          .......+++++.+
T Consensus       199 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~l~~  252 (296)
T 4hgt_A          199 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--------------------------IEVLCKGYPSEFAT  252 (296)
T ss_dssp             HHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--------------------------HHHHTTTSCHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch--------------------------hhhhhccCCHHHHH
Confidence            99999999999999999875422   12222211100000                          11122356789999


Q ss_pred             HHHHhcccCCCCCCCHHHHhc
Q psy7274         156 LLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       156 ll~~~L~~dP~~R~t~~eil~  176 (308)
                      ||.+||..||.+|||++++++
T Consensus       253 li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          253 YLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHhcCCCCCCCHHHHHH
Confidence            999999999999999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.92  E-value=1.3e-25  Score=192.55  Aligned_cols=133  Identities=21%  Similarity=0.297  Sum_probs=93.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.........  .....+|..|+|||++.+ ..++.++||||+||+
T Consensus       137 i~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~  206 (281)
T 1mp8_A          137 FVHRDIAARNVLVS-------SNDCVKLGDFGLSRYMEDSTYYK--ASKGKLPIKWMAPESINF-RRFTSASDVWMFGVC  206 (281)
T ss_dssp             CCCSCCSGGGEEEE-------ETTEEEECC---------------------CCGGGCCHHHHHH-CCCSHHHHHHHHHHH
T ss_pred             eecccccHHHEEEC-------CCCCEEECccccccccCcccccc--cccCCCcccccChhhccc-CCCCCccCchHHHHH
Confidence            36999999999998       78999999999998765432111  233466789999999865 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+....+.+..+......                              ...+.+++.+.++|.+||..
T Consensus       207 l~ell~~g~~pf~~~~~~~~~~~i~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~  256 (281)
T 1mp8_A          207 MWEILMHGVKPFQGVKNNDVIGRIENGERL------------------------------PMPPNCPPTLYSLMTKCWAY  256 (281)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHhcCCCCCCcCCHHHHHHHHHcCCCC------------------------------CCCCCCCHHHHHHHHHHccC
Confidence            999996 99999887765555444321110                              11235689999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||+.+++++
T Consensus       257 ~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          257 DPSRRPRFTELKAQ  270 (281)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999998753

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=1.9e-25  Score=190.32  Aligned_cols=133  Identities=16%  Similarity=0.231  Sum_probs=105.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++........  ......+|..|+|||++.+ ..++.++||||+||+
T Consensus       127 i~H~dikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~  196 (269)
T 4hcu_A          127 VIHRDLAARNCLVG-------ENQVIKVSDFGMTRFVLDDQYT--SSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVL  196 (269)
T ss_dssp             CCCSCCCGGGEEEC-------GGGCEEECCTTGGGGBCCHHHH--STTSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             eecCCcchheEEEc-------CCCCEEeccccccccccccccc--cccCcccccccCCHHHhcC-CCCCchhhhHHHHHH
Confidence            37999999999998       7899999999999866432111  1234467888999999875 459999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |+.||.+.+..+....+.......                              .....++.+.+++.+||..
T Consensus       197 l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~  246 (269)
T 4hcu_A          197 MWEVFSEGKIPYENRSNSEVVEDISTGFRLY------------------------------KPRLASTHVYQIMNHCWRE  246 (269)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC------------------------------CCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHhcCccCC------------------------------CCCcCCHHHHHHHHHHccC
Confidence            999999 999999888776665554321111                              0123578999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||++++++|
T Consensus       247 ~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          247 RPEDRPAFSRLLRQ  260 (269)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999865

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.92  E-value=5.3e-25  Score=189.94  Aligned_cols=140  Identities=16%  Similarity=0.068  Sum_probs=101.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++.    .+.++.+||+|||+|+.........    .......||..|+|||++.+ ..++.++||||+
T Consensus       127 vH~dlkp~NIl~~~----~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~sl  201 (296)
T 3uzp_A          127 IHRDVKPDNFLMGL----GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESL  201 (296)
T ss_dssp             ECSCCCGGGEEECC----GGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT-CCCCHHHHHHHH
T ss_pred             eeCCCCHHHeEEec----CCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcC-CCCCcchhhHHH
Confidence            59999999999930    0167899999999998765432211    11245689999999999875 459999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCH---HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHH
Q psy7274          82 GCILAEMISNRPIFPGKHY---LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLG  158 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~---~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  158 (308)
                      ||++++|++|+.||.+.+.   ...+..+.......+.                          ....+.+++++.++|.
T Consensus       202 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~  255 (296)
T 3uzp_A          202 GYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI--------------------------EVLCKGYPSEFATYLN  255 (296)
T ss_dssp             HHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH--------------------------HHHTTTSCHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch--------------------------HHHHhhCCHHHHHHHH
Confidence            9999999999999987432   2222222211100110                          1112356789999999


Q ss_pred             HhcccCCCCCCCHHHHhc
Q psy7274         159 KMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       159 ~~L~~dP~~R~t~~eil~  176 (308)
                      +||+.||.+|||++++++
T Consensus       256 ~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          256 FCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTSCTTCCCCHHHHHH
T ss_pred             HHHhcCcCcCCCHHHHHH
Confidence            999999999999999874

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.91  E-value=5e-25  Score=187.79  Aligned_cols=138  Identities=20%  Similarity=0.221  Sum_probs=97.2

Q ss_pred             CCCCCCCCCCcccCcccccc-CCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQY-YDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~-~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++...... ..++.+||+|||+++......     .....||..|+|||++.+ ..++.++||||+||
T Consensus       129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~  202 (271)
T 3dtc_A          129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-----KMSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGV  202 (271)
T ss_dssp             CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------CCGGGSCHHHHHH-CCCSHHHHHHHHHH
T ss_pred             eeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----ccCCCCccceeCHHHhcc-CCCCchhhHHHHHH
Confidence            35999999999998221111 126889999999998664332     234579999999999875 45899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++++|++|+.||.+.+.......+......                             .......++.+.++|.+||..
T Consensus       203 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~li~~~l~~  253 (271)
T 3dtc_A          203 LLWELLTGEVPFRGIDGLAVAYGVAMNKLA-----------------------------LPIPSTCPEPFAKLMEDCWNP  253 (271)
T ss_dssp             HHHHHHHCCCTTTTSCHHHHHHHHHTSCCC-----------------------------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHhhhcCCCC-----------------------------CCCCcccCHHHHHHHHHHhcC
Confidence            999999999999887765544433211000                             011235678999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||++++++|
T Consensus       254 ~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          254 DPHSRPSFTNILDQ  267 (271)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.91  E-value=1.1e-24  Score=192.54  Aligned_cols=141  Identities=10%  Similarity=0.048  Sum_probs=100.6

Q ss_pred             CCCCCCCCCcccCccccccCCCC--CceEeccCCccccCCCCCC----CCCccCcccccccchhhHhhCCCCCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA--DEPICDFGLARVADPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~--~~ki~DFGla~~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiW   79 (308)
                      .||||||+|||++       .++  .+||+|||+|+........    .......+||..|+|||++.+ ..++.++|||
T Consensus       173 vH~Dlkp~NIll~-------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~  244 (345)
T 2v62_A          173 VHGDIKAANLLLG-------YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG-VALSRRSDVE  244 (345)
T ss_dssp             ECSCCSGGGEEEE-------SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT-CCCCHHHHHH
T ss_pred             eCCCcCHHHEEEc-------cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC-CCCCchhhHH
Confidence            6999999999998       555  9999999999876432111    111245689999999999875 4599999999


Q ss_pred             HHHHHHHHHhhCCCCCCCC--CHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          80 SVGCILAEMISNRPIFPGK--HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~--~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      |+||++|+|++|+.||.+.  +...............+. .+...           .+          ...++.++.++|
T Consensus       245 slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~----------~~~~~~~l~~li  302 (345)
T 2v62_A          245 ILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQ-SVLKW-----------AP----------SGSSCCEIAQFL  302 (345)
T ss_dssp             HHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTH-HHHHH-----------SC----------TTSCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccH-HHHhh-----------cc----------ccccHHHHHHHH
Confidence            9999999999999999653  222222222222211111 11100           00          014678999999


Q ss_pred             HHhcccCCCCCCCHHHHhc
Q psy7274         158 GKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~  176 (308)
                      .+||..||.+|||++++++
T Consensus       303 ~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          303 VCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhhcCcccCCCHHHHHH
Confidence            9999999999999999874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.91  E-value=1e-24  Score=191.39  Aligned_cols=136  Identities=15%  Similarity=0.144  Sum_probs=99.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCC-----ceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPAD-----EPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSI   76 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~-----~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~   76 (308)
                      .||||||+|||++       .++.     +||+|||+|+.........    ......+||..|+|||++.+ ..++.++
T Consensus       127 iHrDlkp~Nill~-------~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~  198 (330)
T 2izr_A          127 IYRDVKPENFLIG-------RPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG-KEQSRRD  198 (330)
T ss_dssp             ECCCCCGGGEEEC-------CGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHH
T ss_pred             eccCCCHHHeeec-------cCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcC-CCCCchh
Confidence            6999999999998       5555     9999999998764332111    01245689999999999875 5599999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          77 DIWSVGCILAEMISNRPIFPGKHY---LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        77 DiWSlG~il~ell~g~~pf~~~~~---~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      ||||+||+++||++|+.||.+.+.   .+.+..+.......+..                          ...... +++
T Consensus       199 Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~~-p~~  251 (330)
T 2izr_A          199 DLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIE--------------------------VLCENF-PEM  251 (330)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHH--------------------------HHTTTC-HHH
T ss_pred             HHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHH--------------------------HHhccC-hHH
Confidence            999999999999999999988443   33333332211111111                          011122 389


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~  176 (308)
                      .++|.+||..||.+||+++++++
T Consensus       252 ~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          252 ATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999999988874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.91  E-value=2.9e-25  Score=190.50  Aligned_cols=133  Identities=17%  Similarity=0.218  Sum_probs=105.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++........  ......+|..|+|||++.+ ..++.++||||+||+
T Consensus       141 i~H~dikp~Nili~-------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~  210 (283)
T 3gen_A          141 FLHRDLAARNCLVN-------DQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVL  210 (283)
T ss_dssp             CCCSSCSGGGEEEC-------TTSCEEECSTTGGGGBCCHHHH--STTSTTSCGGGCCHHHHHH-CCCSHHHHHHHHHHH
T ss_pred             ccCCCCccceEEEc-------CCCCEEEccccccccccccccc--cccCCccCcccCCHHHhcc-CCCCchhhHHHHHHH
Confidence            36999999999999       8899999999999876432111  1233466788999999875 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |+.||.+.+..+....+........                              ....++.+.++|.+||..
T Consensus       211 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~l~~li~~~l~~  260 (283)
T 3gen_A          211 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR------------------------------PHLASEKVYTIMYSCWHE  260 (283)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC------------------------------CTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHhCCCCCccccChhHHHHHHhcccCCCC------------------------------CCcCCHHHHHHHHHHccC
Confidence            999998 9999998887766665543222111                              123578899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||++++++|
T Consensus       261 ~p~~Rps~~~ll~~  274 (283)
T 3gen_A          261 KADERPTFKILLSN  274 (283)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999865

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=4.4e-25  Score=189.87  Aligned_cols=135  Identities=16%  Similarity=0.179  Sum_probs=105.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++................||..|+|||++.+ ..++.++||||+||++
T Consensus       132 ~H~dlkp~Nili~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  203 (287)
T 1u59_A          132 VHRDLAARNVLLV-------NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTM  203 (287)
T ss_dssp             ECCCCSGGGEEEE-------ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             eeCCCchheEEEc-------CCCCEEECcccceeeeccCcceeeccccccccccccCHHHhcc-CCCCchhhHHHHHHHH
Confidence            6999999999998       8899999999999877543322222234467889999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+....+.....                              ....+.+++++.++|.+||..|
T Consensus       204 ~ellt~g~~p~~~~~~~~~~~~i~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~~  253 (287)
T 1u59_A          204 WEALSYGQKPYKKMKGPEVMAFIEQGKR------------------------------MECPPECPPELYALMSDCWIYK  253 (287)
T ss_dssp             HHHHTTSCCTTTTCCTHHHHHHHHTTCC------------------------------CCCCTTCCHHHHHHHHHTTCSS
T ss_pred             HHHHcCCCCCcccCCHHHHHHHHhcCCc------------------------------CCCCCCcCHHHHHHHHHHcCCC
Confidence            99998 9999988776555544432110                              0112356899999999999999


Q ss_pred             CCCCCCHHHHhcCC
Q psy7274         165 PHKRIGVEDALAHP  178 (308)
Q Consensus       165 P~~R~t~~eil~hp  178 (308)
                      |.+|||++++++|.
T Consensus       254 p~~Rps~~~l~~~l  267 (287)
T 1u59_A          254 WEDRPDFLTVEQRM  267 (287)
T ss_dssp             GGGSCCHHHHHHHH
T ss_pred             hhhCcCHHHHHHHH
Confidence            99999999998763

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.91  E-value=3.3e-25  Score=188.71  Aligned_cols=132  Identities=15%  Similarity=0.168  Sum_probs=104.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.........  .....+|..|+|||++.+ ..++.++||||+||++
T Consensus       126 ~H~dikp~Nil~~-------~~~~~~l~Dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  195 (268)
T 3sxs_A          126 IHRDLAARNCLVD-------RDLCVKVSDFGMTRYVLDDQYVS--SVGTKFPVKWSAPEVFHY-FKYSSKSDVWAFGILM  195 (268)
T ss_dssp             EESSCSGGGEEEC-------TTCCEEECCTTCEEECCTTCEEE--CCSCCCCGGGCCHHHHHH-SEEETTHHHHHHHHHH
T ss_pred             ecCCcCcceEEEC-------CCCCEEEccCccceecchhhhhc--ccCCCcCcccCCHHHHhc-cCCchhhhhHHHHHHH
Confidence            6999999999999       88999999999998765432111  234456778999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+....+........                              ....++.+.++|.+||+.|
T Consensus       196 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~l~~li~~~l~~~  245 (268)
T 3sxs_A          196 WEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR------------------------------PHLASDTIYQIMYSCWHEL  245 (268)
T ss_dssp             HHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC------------------------------CTTSCHHHHHHHHHTTCSS
T ss_pred             HHHHcCCCCCccccChHHHHHHHHcCCCCCC------------------------------CCcChHHHHHHHHHHcCCC
Confidence            99998 9999988877666555432211110                              1235788999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.++++|
T Consensus       246 p~~Rps~~~ll~~  258 (268)
T 3sxs_A          246 PEKRPTFQQLLSS  258 (268)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999865

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.91  E-value=7e-25  Score=200.71  Aligned_cols=131  Identities=21%  Similarity=0.292  Sum_probs=104.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........  ......+|..|+|||++.. ..++.++||||+||++
T Consensus       306 vHrDlkp~Nill~-------~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l  375 (454)
T 1qcf_A          306 IHRDLRAANILVS-------ASLVCKIADFGLARVIEDNEYT--AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILL  375 (454)
T ss_dssp             CCSSCSGGGEEEC-------TTCCEEECSTTGGGGBCCHHHH--TTCSSSSCGGGSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEC-------CCCcEEEeeCCCceEcCCCcee--ccCCCcccccccCHHHhcc-CCCCcHHHHHhHHHHH
Confidence            6999999999999       8899999999999876432111  1123456788999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |+.||.+.+..+.+..+......+.                              ...+++++.+||.+||..|
T Consensus       376 ~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~------------------------------~~~~~~~l~~li~~cl~~d  425 (454)
T 1qcf_A          376 MEIVTYGRIPYPGMSNPEVIRALERGYRMPR------------------------------PENCPEELYNIMMRCWKNR  425 (454)
T ss_dssp             HHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC------------------------------CTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------CCCCCHHHHHHHHHHccCC
Confidence            99999 9999999887776666554322111                              1246789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       426 p~~RPt~~~i~~  437 (454)
T 1qcf_A          426 PEERPTFEYIQS  437 (454)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999874

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1e-24  Score=191.75  Aligned_cols=135  Identities=18%  Similarity=0.252  Sum_probs=97.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++................+|..|+|||++.+ ..++.++||||+||+
T Consensus       168 ivH~Dikp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  239 (333)
T 1mqb_A          168 YVHRDLAARNILVN-------SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIV  239 (333)
T ss_dssp             CCCSCCCGGGEEEC-------TTCCEEECCCCC-----------------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHH
T ss_pred             eeCCCCChheEEEC-------CCCcEEECCCCcchhhccccccccccCCCCccccccCchhccc-CCCCchhhhHHHHHH
Confidence            37999999999999       8899999999999876543221111233456789999999865 559999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |+.||.+.+..+....+......+.                              ....+..+.++|.+||..
T Consensus       240 l~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~l~~li~~~l~~  289 (333)
T 1mqb_A          240 MWEVMTYGERPYWELSNHEVMKAINDGFRLPT------------------------------PMDCPSAIYQLMMQCWQQ  289 (333)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC------------------------------CTTCBHHHHHHHHHHTCS
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHCCCcCCC------------------------------cccCCHHHHHHHHHHcCC
Confidence            999998 9999988876665555432211111                              124578999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+||++.+++++
T Consensus       290 ~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          290 ERARRPKFADIVSI  303 (333)
T ss_dssp             STTTSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999998754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.91  E-value=5.7e-25  Score=188.53  Aligned_cols=133  Identities=19%  Similarity=0.247  Sum_probs=100.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.........  .....+|..|+|||++.+ ..++.++||||+||+
T Consensus       134 i~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  203 (281)
T 3cc6_A          134 CVHRDIAVRNILVA-------SPECVKLGDFGLSRYIEDEDYYK--ASVTRLPIKWMSPESINF-RRFTTASDVWMFAVC  203 (281)
T ss_dssp             CCCCCCSGGGEEEE-------ETTEEEECCCCGGGCC-----------CCCCCGGGCCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             cccCCCccceEEEC-------CCCcEEeCccCCCcccccccccc--cccCCCCcceeCchhhcc-CCCCchhccHHHHHH
Confidence            37999999999998       88999999999998765432111  233467889999999865 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |+.||.+....+....+......+                              .....++.+.++|.+||..
T Consensus       204 l~~llt~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~  253 (281)
T 3cc6_A          204 MWEILSFGKQPFFWLENKDVIGVLEKGDRLP------------------------------KPDLCPPVLYTLMTRCWDY  253 (281)
T ss_dssp             HHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHhCCCCCcccCChHHHHHHHhcCCCCC------------------------------CCCCCCHHHHHHHHHHccC
Confidence            999998 999998766555444443221111                              0124578999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||+.+++++
T Consensus       254 ~p~~Rps~~ell~~  267 (281)
T 3cc6_A          254 DPSDRPRFTELVCS  267 (281)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CchhCcCHHHHHHH
Confidence            99999999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.91  E-value=4.1e-25  Score=192.23  Aligned_cols=133  Identities=21%  Similarity=0.234  Sum_probs=103.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......... ......+|..|+|||++.+ ..++.++||||+||++
T Consensus       172 vH~dikp~NIli~-------~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  242 (314)
T 2ivs_A          172 VHRDLAARNILVA-------EGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLL  242 (314)
T ss_dssp             ECCCCSGGGEEEE-------TTTEEEECCCTTCEECTTTSCEE-CSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             cccccchheEEEc-------CCCCEEEccccccccccccccce-eccCCCCcccccChhhhcC-CCcCchhhHHHHHHHH
Confidence            6999999999998       88999999999998765432211 1234467889999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.........+.....                              ......+++.+.++|.+||..|
T Consensus       243 ~el~t~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~d  292 (314)
T 2ivs_A          243 WEIVTLGGNPYPGIPPERLFNLLKTGHR------------------------------MERPDNCSEEMYRLMLQCWKQE  292 (314)
T ss_dssp             HHHHTTSCCSSTTCCGGGHHHHHHTTCC------------------------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHhhcCCc------------------------------CCCCccCCHHHHHHHHHHccCC
Confidence            99999 9999988775544433322110                              0112356899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+++++++
T Consensus       293 p~~Rps~~~l~~~  305 (314)
T 2ivs_A          293 PDKRPVFADISKD  305 (314)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.91  E-value=6.2e-25  Score=191.28  Aligned_cols=135  Identities=22%  Similarity=0.304  Sum_probs=103.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......... ......||..|+|||++.+ ..++.++||||+||+
T Consensus       169 i~H~dikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~i  239 (316)
T 2xir_A          169 CIHRDLAARNILLS-------EKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVL  239 (316)
T ss_dssp             CCCSCCSGGGEEEC-------GGGCEEECCCGGGSCTTTCTTSE-EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             cccccCccceEEEC-------CCCCEEECCCccccccccCccce-eccCCCcceeecCchhhcc-ccccchhHHHHHHHH
Confidence            37999999999998       88999999999998765432211 1244578899999999875 459999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+......+.........+                             ......++.+.++|.+||..
T Consensus       240 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~  290 (316)
T 2xir_A          240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----------------------------RAPDYTTPEMYQTMLDCWHG  290 (316)
T ss_dssp             HHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC-----------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHhCCCCCCcccchhHHHHHHhccCccC-----------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            999998 999998766433332222110000                             01124678999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||++++++|
T Consensus       291 dp~~Rps~~ell~~  304 (316)
T 2xir_A          291 EPSQRPTFSELVEH  304 (316)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999876

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.91  E-value=7.5e-25  Score=191.41  Aligned_cols=133  Identities=17%  Similarity=0.207  Sum_probs=104.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......||..|+|||++.+ ..++.++||||+||++
T Consensus       160 ~H~dikp~NIli~-------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  230 (322)
T 1p4o_A          160 VHRDLAARNCMVA-------EDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVL  230 (322)
T ss_dssp             BCSCCSGGGEEEC-------TTCCEEECCTTCCCGGGGGGCE-EGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ccCCCccceEEEc-------CCCeEEECcCcccccccccccc-ccccCCCCCCCccChhhhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       8899999999999865432111 11234567889999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.+..+....+.....                              ......++..+.+||.+||..|
T Consensus       231 ~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~d  280 (322)
T 1p4o_A          231 WEIATLAEQPYQGLSNEQVLRFVMEGGL------------------------------LDKPDNCPDMLFELMRMCWQYN  280 (322)
T ss_dssp             HHHHHTSCCTTTTSCHHHHHHHHHTTCC------------------------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCccccCCHHHHHHHHHcCCc------------------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence            99999 8899988876655554432110                              0112356789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.++++|
T Consensus       281 p~~Rps~~e~l~~  293 (322)
T 1p4o_A          281 PKMRPSFLEIISS  293 (322)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999876

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.91  E-value=8.8e-25  Score=190.05  Aligned_cols=134  Identities=22%  Similarity=0.288  Sum_probs=103.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......||..|+|||++.+ ..++.++||||+||++
T Consensus       167 ~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  237 (313)
T 1t46_A          167 IHRDLAARNILLT-------HGRITKICDFGLARDIKNDSNY-VVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFL  237 (313)
T ss_dssp             CCSCCSGGGEEEE-------TTTEEEECCCGGGSCTTSCTTS-EECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ecCCCccceEEEc-------CCCCEEEccccccccccccccc-eeccCCCCcceeeChHHhcC-CCCChHHHHHHHHHHH
Confidence            7999999999998       8899999999999876543321 11234567889999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+......+..+......+                             ......+..+.++|.+||..|
T Consensus       238 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~d  288 (313)
T 1t46_A          238 WELFSLGSSPYPGMPVDSKFYKMIKEGFRM-----------------------------LSPEHAPAEMYDIMKTCWDAD  288 (313)
T ss_dssp             HHHHTTTCCSSTTCCSSHHHHHHHHHTCCC-----------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCcccchhHHHHHhccCCCC-----------------------------CCcccCCHHHHHHHHHHcCCC
Confidence            99998 999998876444333332211000                             011346789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+++++++
T Consensus       289 p~~Rps~~ell~~  301 (313)
T 1t46_A          289 PLKRPTFKQIVQL  301 (313)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             chhCcCHHHHHHH
Confidence            9999999999864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.91  E-value=6.9e-25  Score=195.74  Aligned_cols=133  Identities=17%  Similarity=0.237  Sum_probs=91.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+................+|..|+|||++.+ ..++.++||||+||++
T Consensus       169 vH~Dlkp~NIll~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~SlG~il  240 (373)
T 2qol_A          169 VHRDLAARNILIN-------SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVL  240 (373)
T ss_dssp             CCSCCCGGGEEEC-------TTCCEEECCC----------------------CTTSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             eCCCCCcceEEEc-------CCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhcc-CCcCchhcHHHHHHHH
Confidence            7999999999999       8899999999999876543221111223345778999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |+.||.+.+..+....+......+.                              ....+..+.++|.+||+.|
T Consensus       241 ~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~------------------------------~~~~~~~l~~li~~cl~~d  290 (373)
T 2qol_A          241 WEVMSYGERPYWEMSNQDVIKAVDEGYRLPP------------------------------PMDCPAALYQLMLDCWQKD  290 (373)
T ss_dssp             HHHHTTC-CTTTTCCHHHHHHHHHTTEECCC------------------------------CTTCBHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------CccccHHHHHHHHHHhCcC
Confidence            99997 9999988877665555432211111                              1245688999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       291 p~~RPs~~~i~~  302 (373)
T 2qol_A          291 RNNRPKFEQIVS  302 (373)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.91  E-value=1.1e-24  Score=189.73  Aligned_cols=134  Identities=14%  Similarity=0.155  Sum_probs=97.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++......... ......+|..|+|||++.+ ..++.++||||+||+
T Consensus       168 ivH~dikp~NIli~-------~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  238 (313)
T 3brb_A          168 FLHRDLAARNCMLR-------DDMTVCVADFGLSKKIYSGDYYR-QGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVT  238 (313)
T ss_dssp             CCCCCCSGGGEEEC-------TTSCEEECSCSCC-----------------CCGGGSCHHHHHS-SCCCHHHHHHHHHHH
T ss_pred             cccCCCCcceEEEc-------CCCcEEEeecCcceecccccccC-cccccCCCccccCchhhcC-CCccchhhhHHHHHH
Confidence            37999999999999       88999999999998764332111 1233467889999999875 559999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+.........+......                              .....+++.+.++|.+||..
T Consensus       239 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~  288 (313)
T 3brb_A          239 MWEIATRGMTPYPGVQNHEMYDYLLHGHRL------------------------------KQPEDCLDELYEIMYSCWRT  288 (313)
T ss_dssp             HHHHHTTSCCSSTTCCGGGHHHHHHTTCCC------------------------------CCBTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHhcCCCCCccCCHHHHHHHHHcCCCC------------------------------CCCccccHHHHHHHHHHcCC
Confidence            999999 88999887765554444321110                              01135678999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||+++++++
T Consensus       289 dp~~Rps~~~l~~~  302 (313)
T 3brb_A          289 DPLDRPTFSVLRLQ  302 (313)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999854

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=5.5e-25  Score=194.07  Aligned_cols=135  Identities=21%  Similarity=0.233  Sum_probs=103.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......||..|+|||++.+ ..++.++||||+||++
T Consensus       194 vH~Dikp~NIll~-------~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  264 (344)
T 1rjb_A          194 VHRDLAARNVLVT-------HGKVVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILL  264 (344)
T ss_dssp             EETTCSGGGEEEE-------TTTEEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEEc-------CCCcEEeCCCccCcccccCccc-eeccCccCccCccCHHHhcc-CCCChhHhHHHHHHHH
Confidence            6999999999998       8899999999999866433221 11244567889999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+......+..+......+                             ......++++.+||.+||..|
T Consensus       265 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~d  315 (344)
T 1rjb_A          265 WEIFSLGVNPYPGIPVDANFYKLIQNGFKM-----------------------------DQPFYATEEIYIIMQSCWAFD  315 (344)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHcCCCCCcccCCcHHHHHHHHhcCCCC-----------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            99998 999998876444433332211000                             011246789999999999999


Q ss_pred             CCCCCCHHHHhcCC
Q psy7274         165 PHKRIGVEDALAHP  178 (308)
Q Consensus       165 P~~R~t~~eil~hp  178 (308)
                      |.+|||++++++|-
T Consensus       316 p~~Rps~~~l~~~l  329 (344)
T 1rjb_A          316 SRKRPSFPNLTSFL  329 (344)
T ss_dssp             GGGSCCHHHHHHHH
T ss_pred             chhCcCHHHHHHHH
Confidence            99999999998753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.91  E-value=8e-25  Score=192.84  Aligned_cols=132  Identities=17%  Similarity=0.165  Sum_probs=102.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ .......||..|+|||++.+ ..++.++||||+||++
T Consensus       196 vH~Dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  266 (343)
T 1luf_A          196 VHRDLATRNCLVG-------ENMVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVL  266 (343)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ecCCCCcceEEEC-------CCCeEEEeecCCCcccccCccc-cccCCCcccceecChhhhcc-CCcCcccccHHHHHHH
Confidence            7999999999999       8899999999999865432211 11234578899999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |+|++ |..||.+.+..+....+.....                              ......++..+.+||.+||..|
T Consensus       267 ~el~t~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~~  316 (343)
T 1luf_A          267 WEIFSYGLQPYYGMAHEEVIYYVRDGNI------------------------------LACPENCPLELYNLMRLCWSKL  316 (343)
T ss_dssp             HHHHTTTCCTTTTSCHHHHHHHHHTTCC------------------------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCcCCCCChHHHHHHHhCCCc------------------------------CCCCCCCCHHHHHHHHHHcccC
Confidence            99999 9999998876665554432110                              0112356789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       317 p~~Rps~~~~~~  328 (343)
T 1luf_A          317 PADRPSFCSIHR  328 (343)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             cccCCCHHHHHH
Confidence            999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.91  E-value=1.6e-24  Score=190.46  Aligned_cols=133  Identities=19%  Similarity=0.256  Sum_probs=104.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......... ......+|..|+|||++.+ ..++.++||||+||++
T Consensus       179 vH~Dlkp~NIll~-------~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  249 (334)
T 2pvf_A          179 IHRDLAARNVLVT-------ENNVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLM  249 (334)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCTTCEECTTTSSEE-CCSCCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             eCCCCccceEEEc-------CCCCEEEcccccccccccccccc-ccCCCCcccceeChHHhcC-CCcChHHHHHHHHHHH
Confidence            6999999999999       88999999999998765432111 1234467889999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.+..+....+......+                              ....++..+.++|.+||..|
T Consensus       250 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~d  299 (334)
T 2pvf_A          250 WEIFTLGGSPYPGIPVEELFKLLKEGHRMD------------------------------KPANCTNELYMMMRDCWHAV  299 (334)
T ss_dssp             HHHHTTSCCSSTTCCHHHHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCcCcCCHHHHHHHHhcCCCCC------------------------------CCccCCHHHHHHHHHHccCC
Confidence            99999 999999887666555443321110                              12346789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+++++++
T Consensus       300 p~~Rps~~ell~~  312 (334)
T 2pvf_A          300 PSQRPTFKQLVED  312 (334)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999854

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.91  E-value=1.1e-24  Score=187.19  Aligned_cols=130  Identities=18%  Similarity=0.264  Sum_probs=98.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCC-----ceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC-CCCCCchhhH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPAD-----EPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-SKGYTKSIDI   78 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~-----~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~~Di   78 (308)
                      -.||||||+|||++       .++.     +||+|||+|+.....      ....+||..|+|||++.+ ...++.++||
T Consensus       145 ivH~dikp~Nil~~-------~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di  211 (287)
T 4f0f_A          145 IVHRDLRSPNIFLQ-------SLDENAPVCAKVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADT  211 (287)
T ss_dssp             CBCSCCSGGGEEES-------CCCTTCSCCEEECCCTTCBCCSSC------EECCCCCCTTSCGGGSSCSSCEECHHHHH
T ss_pred             eecCCCCcceEEEe-------ccCCCCceeEEeCCCCcccccccc------ccccCCCccccCchhhccCCCCcCchhhH
Confidence            47999999999998       5554     999999999854322      345689999999998742 3447899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCHHHH--HHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHH
Q psy7274          79 WSVGCILAEMISNRPIFPGKHYLDQ--LNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL  156 (308)
Q Consensus        79 WSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  156 (308)
                      ||+||++|+|++|+.||.+.+....  ...+... +..                            ......+++.+.+|
T Consensus       212 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~----------------------------~~~~~~~~~~l~~l  262 (287)
T 4f0f_A          212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREE-GLR----------------------------PTIPEDCPPRLRNV  262 (287)
T ss_dssp             HHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS-CCC----------------------------CCCCTTSCHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc-CCC----------------------------CCCCcccCHHHHHH
Confidence            9999999999999999976553222  2221110 100                            01123568899999


Q ss_pred             HHHhcccCCCCCCCHHHHhc
Q psy7274         157 LGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~  176 (308)
                      |.+||..||.+|||++++++
T Consensus       263 i~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          263 IELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhcCChhhCcCHHHHHH
Confidence            99999999999999999875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.91  E-value=1.1e-24  Score=206.75  Aligned_cols=133  Identities=17%  Similarity=0.203  Sum_probs=101.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+............+...+|..|+|||++.+ ..++.++||||+||++
T Consensus       491 iHrDLkp~NILl~-------~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv~l  562 (635)
T 4fl3_A          491 VHRDLAARNVLLV-------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLM  562 (635)
T ss_dssp             CCSCCSGGGEEEE-------ETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             eCCCCChHhEEEe-------CCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcC-CCCCcHHHHHHHHHHH
Confidence            7999999999999       8899999999999977543322222344567889999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |+.||.+.+..+....+......+                              ....++.++.+||.+||..|
T Consensus       563 ~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~------------------------------~p~~~~~~l~~li~~cl~~d  612 (635)
T 4fl3_A          563 WEAFSYGQKPYRGMKGSEVTAMLEKGERMG------------------------------CPAGCPREMYDLMNLCWTYD  612 (635)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            99998 999999988776666554321111                              11346789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       613 P~~RPs~~~l~~  624 (635)
T 4fl3_A          613 VENRPGFAAVEL  624 (635)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.91  E-value=1.7e-24  Score=192.58  Aligned_cols=144  Identities=13%  Similarity=0.057  Sum_probs=100.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++.     +.++.+||+|||+|+.........    ......+||..|+|||++.+ ..++.++||||+
T Consensus       174 iHrDlkp~Nill~~-----~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~sl  247 (364)
T 3op5_A          174 VHGDIKASNLLLNY-----KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG-VAPSRRGDLEIL  247 (364)
T ss_dssp             ECCCCCGGGEEEES-----SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT-CCCCHHHHHHHH
T ss_pred             EEecCCHHHEEEec-----CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC-CCCCchhhHHHH
Confidence            69999999999962     246899999999998764322111    11244569999999999865 559999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      ||++|||++|+.||.+......+..... ...........           ..++          ....+.++.++|..|
T Consensus       248 G~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~----------~~~~~~~~~~li~~c  306 (364)
T 3op5_A          248 GYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMD-----------KCFP----------AANAPGEIAKYMETV  306 (364)
T ss_dssp             HHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHH-----------HHSC----------TTCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHH-----------Hhcc----------cccCHHHHHHHHHHH
Confidence            9999999999999986433222222111 11000000000           0000          135678999999999


Q ss_pred             cccCCCCCCCHHHHhc
Q psy7274         161 LTFNPHKRIGVEDALA  176 (308)
Q Consensus       161 L~~dP~~R~t~~eil~  176 (308)
                      |..||.+||+++++++
T Consensus       307 l~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          307 KLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HTCCTTCCCCHHHHHH
T ss_pred             hcCCCCCCCCHHHHHH
Confidence            9999999999998874

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.91  E-value=1.2e-24  Score=188.25  Aligned_cols=141  Identities=20%  Similarity=0.302  Sum_probs=97.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCC-----CCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSK-----GYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiW   79 (308)
                      .||||||+|||++       .++.+||+|||+|+......... ......+||+.|+|||++.+..     .++.++|||
T Consensus       135 vH~Dlkp~Nill~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (301)
T 3q4u_A          135 AHRDLKSKNILVK-------KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW  207 (301)
T ss_dssp             ECSCCCGGGEEEC-------TTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHH
T ss_pred             ecCCCChHhEEEc-------CCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHH
Confidence            6999999999999       88999999999998654432211 1123458999999999986543     244789999


Q ss_pred             HHHHHHHHHhhC----------CCCCCCCC----HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcccc
Q psy7274          80 SVGCILAEMISN----------RPIFPGKH----YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL  145 (308)
Q Consensus        80 SlG~il~ell~g----------~~pf~~~~----~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (308)
                      |+||++|||++|          ..||.+..    ....+..+....+                       ..+..+....
T Consensus       208 slG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~  264 (301)
T 3q4u_A          208 AFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQ-----------------------QRPNIPNRWF  264 (301)
T ss_dssp             HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC-----------------------CCCCCCGGGG
T ss_pred             HHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccC-----------------------CCCCCChhhc
Confidence            999999999999          77875432    1122222211111                       1111111111


Q ss_pred             CCCCChhHHHHHHHhcccCCCCCCCHHHHhc
Q psy7274         146 YPNADPNALDLLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       146 ~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~  176 (308)
                      ....+..+.+||.+||+.||.+|||++++++
T Consensus       265 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          265 SDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             GSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            1224577999999999999999999999874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.91  E-value=7.4e-25  Score=195.85  Aligned_cols=132  Identities=17%  Similarity=0.224  Sum_probs=100.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+....... ........+|..|+|||++.+ ..++.++||||+||++
T Consensus       235 vHrDlkp~Nil~~-------~~~~~kl~DfG~s~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il  305 (377)
T 3cbl_A          235 IHRDLAARNCLVT-------EKNVLKISDFGMSREEADGVY-AASGGLRQVPVKWTAPEALNY-GRYSSESDVWSFGILL  305 (377)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCGGGCEECTTSEE-ECCSSCCEEEGGGSCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             CCcccCHHHEEEc-------CCCcEEECcCCCceecCCCce-eecCCCCCCCcCcCCHhHhcc-CCCCchhhHHHHHHHH
Confidence            6999999999999       889999999999986543211 110122346778999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |..||.+.+..+....+......+                              ....+++++.+||.+||..|
T Consensus       306 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~cl~~d  355 (377)
T 3cbl_A          306 WETFSLGASPYPNLSNQQTREFVEKGGRLP------------------------------CPELCPDAVFRLMEQCWAYE  355 (377)
T ss_dssp             HHHHTTSCCSSTTSCHHHHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            99998 999999887655544433211111                              11245789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       356 P~~Rps~~~i~~  367 (377)
T 3cbl_A          356 PGQRPSFSTIYQ  367 (377)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             chhCcCHHHHHH
Confidence            999999999874

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=1.4e-24  Score=187.21  Aligned_cols=133  Identities=17%  Similarity=0.194  Sum_probs=102.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................+|..|+|||++.+ ..++.++||||+||++
T Consensus       139 ~H~dikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  210 (291)
T 1xbb_A          139 VHRDLAARNVLLV-------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLM  210 (291)
T ss_dssp             ECSCCSGGGEEEE-------ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             EcCCCCcceEEEe-------CCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhcc-CCCChhhhHHHHHHHH
Confidence            6999999999998       8899999999999876543322111233456788999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+....+.....                              ......+++.+.++|.+||..|
T Consensus       211 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~d  260 (291)
T 1xbb_A          211 WEAFSYGQKPYRGMKGSEVTAMLEKGER------------------------------MGCPAGCPREMYDLMNLCWTYD  260 (291)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCC------------------------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCC------------------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence            99999 9999998876655444432110                              0112356889999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       261 p~~Rps~~~l~~  272 (291)
T 1xbb_A          261 VENRPGFAAVEL  272 (291)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.90  E-value=1.2e-24  Score=187.78  Aligned_cols=149  Identities=15%  Similarity=0.213  Sum_probs=97.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+................+|..|+|||++.+ ..++.++||||+||++
T Consensus       136 vH~Dikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  207 (295)
T 3ugc_A          136 IHRDLATRNILVE-------NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVL  207 (295)
T ss_dssp             CCSCCSGGGEEEE-------ETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ccCCCCHhhEEEc-------CCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcC-CCCChHHHHHHHHHHH
Confidence            6999999999998       8899999999999876543322222344567888999999875 4599999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..+|.....  .   .....+.........   .............      .....+++++.+||.+||..||
T Consensus       208 ~~l~~g~~~~~~~~~--~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp  273 (295)
T 3ugc_A          208 YELFTYIEKSKSPPA--E---FMRMIGNDKQGQMIV---FHLIELLKNNGRL------PRPDGCPDEIYMIMTECWNNNV  273 (295)
T ss_dssp             HHHHHTTCTTCSHHH--H---HHHHHCTTCCTHHHH---HHHHHHHHTTCCC------CCCTTCCHHHHHHHHHHSCSSG
T ss_pred             HHHHhcccccCCChH--H---HHhhhcCccccchhH---HHHHHHHhccCcC------CCCcCcCHHHHHHHHHHcCCCh
Confidence            999999988854321  1   111122221111110   0111111111110      1123568999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy7274         166 HKRIGVEDALA  176 (308)
Q Consensus       166 ~~R~t~~eil~  176 (308)
                      .+|||++++++
T Consensus       274 ~~Rps~~el~~  284 (295)
T 3ugc_A          274 NQRPSFRDLAL  284 (295)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCCCHHHHHH
Confidence            99999999874

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.90  E-value=8.4e-25  Score=188.23  Aligned_cols=134  Identities=18%  Similarity=0.199  Sum_probs=102.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................+|..|+|||++.+ ..++.++||||+||++
T Consensus       143 ~H~dikp~Nili~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  214 (291)
T 1u46_A          143 IHRDLAARNLLLA-------TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTL  214 (291)
T ss_dssp             ECSCCCGGGEEEE-------ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             ccCCCchheEEEc-------CCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcC-CCCCchhhHHHHHHHH
Confidence            6999999999998       8899999999999877543322112234567889999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+.+..+......+                             .....++..+.++|.+||..|
T Consensus       215 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~~  265 (291)
T 1u46_A          215 WEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------------------------PRPEDCPQDIYNVMVQCWAHK  265 (291)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHHHTSCCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCcccCCHHHHHHHHHccCCCC-----------------------------CCCcCcCHHHHHHHHHHccCC
Confidence            99999 999999887766555443211100                             012356789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       266 p~~Rps~~~l~~  277 (291)
T 1u46_A          266 PEDRPTFVALRD  277 (291)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             cccCcCHHHHHH
Confidence            999999999985

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.90  E-value=2.3e-24  Score=187.28  Aligned_cols=129  Identities=22%  Similarity=0.293  Sum_probs=91.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCC-ceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPAD-EPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~-~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++       .++. +||+|||+++.....      .....||..|+|||++.+ ..++.++||||+||
T Consensus       126 ivH~dlkp~NIll~-------~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~  191 (307)
T 2eva_A          126 LIHRDLKPPNLLLV-------AGGTVLKICDFGTACDIQTH------MTNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGI  191 (307)
T ss_dssp             CCCCCCSGGGEEEE-------TTTTEEEECCCCC------------------CCTTSSCHHHHTC-CCCCTHHHHHHHHH
T ss_pred             eecCCCChhHEEEe-------CCCCEEEEcccccccccccc------cccCCCCCceEChhhhCC-CCCCcHHHHHHHHH
Confidence            47999999999998       6676 799999999865432      234579999999999865 56999999999999


Q ss_pred             HHHHHhhCCCCCCCCCHH--HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          84 ILAEMISNRPIFPGKHYL--DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~--~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ++++|++|+.||.+....  .....+..  +..                            ......++..+.++|.+||
T Consensus       192 il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~----------------------------~~~~~~~~~~l~~li~~~l  241 (307)
T 2eva_A          192 ILWEVITRRKPFDEIGGPAFRIMWAVHN--GTR----------------------------PPLIKNLPKPIESLMTRCW  241 (307)
T ss_dssp             HHHHHHHTCCTTTTTCSSHHHHHHHHHT--TCC----------------------------CCCBTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHCCCCchhhCccHHHHHHHHhc--CCC----------------------------CCcccccCHHHHHHHHHHh
Confidence            999999999999754321  11111110  000                            0112356789999999999


Q ss_pred             ccCCCCCCCHHHHhcC
Q psy7274         162 TFNPHKRIGVEDALAH  177 (308)
Q Consensus       162 ~~dP~~R~t~~eil~h  177 (308)
                      ..||.+|||+++++++
T Consensus       242 ~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          242 SKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.90  E-value=2.1e-24  Score=197.42  Aligned_cols=131  Identities=24%  Similarity=0.335  Sum_probs=99.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.........  .....+|..|+|||++.+. .++.++||||+||++
T Consensus       302 vHrDlkp~Nill~-------~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~sDvwslG~~l  371 (452)
T 1fmk_A          302 VHRDLRAANILVG-------ENLVCKVADFGLARLIEDNEYTA--RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILL  371 (452)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCCTTC----------------CCGGGSCHHHHHHC-CCCHHHHHHHHHHHH
T ss_pred             eCCCCChhhEEEC-------CCCCEEECCCccceecCCCceec--ccCCcccccccCHhHHhcC-CCCccccHHhHHHHH
Confidence            6999999999998       88999999999998764322111  2334567899999998754 599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |+.||.+....+.+..+......+                              ..+.+++.+.+||.+||..|
T Consensus       372 ~el~t~g~~P~~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~cl~~d  421 (452)
T 1fmk_A          372 TELTTKGRVPYPGMVNREVLDQVERGYRMP------------------------------CPPECPESLHDLMCQCWRKE  421 (452)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCCC------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCCCCCHHHHHHHHHHccCC
Confidence            99999 999999988776665554321111                              11346789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       422 P~~Rpt~~~l~~  433 (452)
T 1fmk_A          422 PEERPTFEYLQA  433 (452)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.90  E-value=2.4e-25  Score=194.68  Aligned_cols=149  Identities=19%  Similarity=0.165  Sum_probs=100.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++....... ........||..|+|||++.+. .++.++||||+||++
T Consensus       161 vH~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~il  231 (321)
T 2qkw_B          161 IHRDVKSINILLD-------ENFVPKITDFGISKKGTELDQ-THLSTVVKGTLGYIDPEYFIKG-RLTEKSDVYSFGVVL  231 (321)
T ss_dssp             ECSCCCSTTEEEC-------TTCCEEECCCTTCEECSSSSC-CCCBCCCEEETTTCCHHHHHHC-BCCTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEC-------CCCCEEEeecccccccccccc-cccccccCCCccccCHHHhcCC-CCCcccchHhHHHHH
Confidence            5999999999999       899999999999986543221 1113445799999999998754 589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCC-CCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKP-KVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+.||.+....+....+....               ............ ........+..+..+.+++.+||..|
T Consensus       232 ~ell~g~~p~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  296 (321)
T 2qkw_B          232 FEVLCARSAIVQSLPREMVNLAEWAV---------------ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALS  296 (321)
T ss_dssp             HHHHHCCTTCSCSSSSSCCCHHHHTH---------------HHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCcccccCcHHHHHHHHHhh---------------hccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCC
Confidence            99999999997654221111100000               000000000000 00001112234567899999999999


Q ss_pred             CCCCCCHHHHhcCC
Q psy7274         165 PHKRIGVEDALAHP  178 (308)
Q Consensus       165 P~~R~t~~eil~hp  178 (308)
                      |.+|||++++++|-
T Consensus       297 P~~Rps~~ell~~L  310 (321)
T 2qkw_B          297 SEDRPSMGDVLWKL  310 (321)
T ss_dssp             GGGSCCHHHHHHHH
T ss_pred             cccCcCHHHHHHHH
Confidence            99999999998653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.90  E-value=1.1e-24  Score=190.87  Aligned_cols=140  Identities=19%  Similarity=0.140  Sum_probs=105.0

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++.    ...+..+||+|||+++......... ......||..|+|||++.+ ..++.++||||+||+
T Consensus       161 i~H~dlkp~NIli~~----~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  234 (327)
T 2yfx_A          161 FIHRDIAARNCLLTC----PGPGRVAKIGDFGMARDIYRASYYR-KGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVL  234 (327)
T ss_dssp             CCCSCCCGGGEEESC----SSTTCCEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             eecCcCCHhHEEEec----CCCcceEEECccccccccccccccc-cCCCcCCCcceeCHhHhcC-CCCCchhhHHHHHHH
Confidence            369999999999971    1123469999999998653322111 1234578899999999875 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |..||.+.+..+....+......                              .....++..+.++|.+||..
T Consensus       235 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~  284 (327)
T 2yfx_A          235 LWEIFSLGYMPYPSKSNQEVLEFVTSGGRM------------------------------DPPKNCPGPVYRIMTQCWQH  284 (327)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHcCCCCCCCCcCHHHHHHHHhcCCCC------------------------------CCCCCCCHHHHHHHHHHhcC
Confidence            999998 99999888766655544321110                              01134678999999999999


Q ss_pred             CCCCCCCHHHHhcCCcc
Q psy7274         164 NPHKRIGVEDALAHPYL  180 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f  180 (308)
                      ||.+|||++++++|.++
T Consensus       285 dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          285 QPEDRPNFAIILERIEY  301 (327)
T ss_dssp             SGGGSCCHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHH
Confidence            99999999999999877

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.90  E-value=1.5e-24  Score=184.31  Aligned_cols=133  Identities=16%  Similarity=0.229  Sum_probs=103.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.......  .......+|..|+|||++.+ ..++.++||||+||+
T Consensus       125 i~H~dl~p~Nili~-------~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  194 (267)
T 3t9t_A          125 VIHRDLAARNCLVG-------ENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVL  194 (267)
T ss_dssp             CCCSSCCGGGEEEC-------GGGCEEECCTTGGGGBCCHHH--HSTTSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             cccCCCchheEEEC-------CCCCEEEcccccccccccccc--cccccccccccccChhhhcC-CCccchhchhhhHHH
Confidence            37999999999998       889999999999987643211  11234467889999999875 458999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |+.||.+.+..+....+.......                              .....+..+.+++.+||..
T Consensus       195 l~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~  244 (267)
T 3t9t_A          195 MWEVFSEGKIPYENRSNSEVVEDISTGFRLY------------------------------KPRLASTHVYQIMNHCWRE  244 (267)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC------------------------------CCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHhccCCCCCCCCCHHHHHHHHhcCCcCC------------------------------CCccCcHHHHHHHHHHccC
Confidence            999999 899998887766555543221100                              1123578999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||+++++++
T Consensus       245 ~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          245 RPEDRPAFSRLLRQ  258 (267)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999854

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.90  E-value=3.1e-25  Score=195.03  Aligned_cols=155  Identities=19%  Similarity=0.261  Sum_probs=97.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC-----CCCCccCcccccccchhhHhhCC------CCCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD-----HTGFLTEYVATRWYRAPEIMLNS------KGYT   73 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~-----~~~~~~~~~gt~~y~aPE~l~~~------~~~~   73 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......     ........+||..|+|||++.+.      ..++
T Consensus       141 ivH~Dikp~Nill~-------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  213 (336)
T 3g2f_A          141 ISHRDLNSRNVLVK-------NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESAL  213 (336)
T ss_dssp             EECSSCSGGGEEEC-------TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHH
T ss_pred             eeecccccceEEEc-------CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccc
Confidence            46999999999999       889999999999987643211     11123456899999999998652      2356


Q ss_pred             chhhHHHHHHHHHHHhhCCCC-CCCCCHHHHHHHHHH-hhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccC---CC
Q psy7274          74 KSIDIWSVGCILAEMISNRPI-FPGKHYLDQLNHILG-ILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY---PN  148 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~p-f~~~~~~~~l~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  148 (308)
                      .++||||+||++|||++|..| |.+.........+.. ....+....+...        .......+..  ...+   ..
T Consensus       214 ~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~  283 (336)
T 3g2f_A          214 KQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVL--------VSREKQRPKF--PEAWKENSL  283 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHH--------HTTSCCCCCC--CTTCCCCSH
T ss_pred             cccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhh--------hcccccCCCC--Ccccccccc
Confidence            789999999999999999654 444332111111111 1122222222111        1111111111  1111   11


Q ss_pred             CChhHHHHHHHhcccCCCCCCCHHHHhc
Q psy7274         149 ADPNALDLLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       149 ~s~~~~~ll~~~L~~dP~~R~t~~eil~  176 (308)
                      .++++.+||.+||..||.+|||++|+++
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          284 AVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            3457999999999999999999999853

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.90  E-value=2.1e-24  Score=185.49  Aligned_cols=131  Identities=16%  Similarity=0.253  Sum_probs=102.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+|+.......  .......+|..|+|||++.+ ..++.++||||+||++
T Consensus       133 ~H~dikp~Nil~~-------~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  202 (288)
T 3kfa_A          133 IHRDLAARNCLVG-------ENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLL  202 (288)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCCGGGTSCSSSS--EEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             cCCCCCcceEEEc-------CCCCEEEccCccceeccCCcc--ccccCCccccCcCChhhhcc-CCCCchhhHHHHHHHH
Confidence            6999999999998       889999999999987654321  11234567889999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+.+.......+......                              .....+++.+.+||.+||..|
T Consensus       203 ~~ll~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~d  252 (288)
T 3kfa_A          203 WEIATYGMSPYPGIDLSQVYELLEKDYRM------------------------------ERPEGCPEKVYELMRACWQWN  252 (288)
T ss_dssp             HHHHTTSCCSSTTCCGGGHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhccCCC------------------------------CCCCCCCHHHHHHHHHHhCCC
Confidence            99999 99999887655444433321111                              111356789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       253 p~~Rps~~~~~~  264 (288)
T 3kfa_A          253 PSDRPSFAEIHQ  264 (288)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.4e-24  Score=193.63  Aligned_cols=134  Identities=17%  Similarity=0.219  Sum_probs=91.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+|+........ ....+...+|..|+|||++.+ ..++.++||||+||+
T Consensus       214 vHrDlkp~NIll~-------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~i  285 (373)
T 3c1x_A          214 VHRDLAARNCMLD-------EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVL  285 (373)
T ss_dssp             CCSCCCGGGEEEC-------TTCCEEECCC---------------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             ecCccchheEEEC-------CCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcC-CCCCcHHHHHHHHHH
Confidence            6999999999999       8899999999999865432211 111234567889999999875 459999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|||++ |.+||.+.+..+....+......                              .....++..+.++|.+||..
T Consensus       286 l~ellt~~~~p~~~~~~~~~~~~~~~~~~~------------------------------~~p~~~~~~l~~li~~cl~~  335 (373)
T 3c1x_A          286 LWELMTRGAPPYPDVNTFDITVYLLQGRRL------------------------------LQPEYCPDPLYEVMLKCWHP  335 (373)
T ss_dssp             HHHHHTTSCCSCTTSCSSCHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHhCcCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            999999 67888776544433333211100                              01124678999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||+++++++
T Consensus       336 dp~~RPs~~ell~~  349 (373)
T 3c1x_A          336 KAEMRPSFSELVSR  349 (373)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999998854

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.90  E-value=6.2e-24  Score=195.21  Aligned_cols=159  Identities=14%  Similarity=0.076  Sum_probs=109.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+||||+.    .+.++.+||+|||+|+.........    ......+||..|+|||++.+ ..++.++||||+
T Consensus       125 vHrDIKP~NILl~~----~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDvwSl  199 (483)
T 3sv0_A          125 LHRDIKPDNFLMGL----GRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG-IEQSRRDDLESL  199 (483)
T ss_dssp             ECCCCCGGGEEECC----GGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHH
T ss_pred             eecccCcceEEEec----CCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcC-CCCChHHHHHHH
Confidence            69999999999930    0167899999999998765432211    11235689999999999875 559999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCH---HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHH
Q psy7274          82 GCILAEMISNRPIFPGKHY---LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLG  158 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~---~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  158 (308)
                      ||++|||++|+.||.+...   ...+..+.........                          ..+...++.++.+||.
T Consensus       200 Gvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--------------------------~~l~~~~p~~l~~li~  253 (483)
T 3sv0_A          200 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI--------------------------EALCRGYPTEFASYFH  253 (483)
T ss_dssp             HHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH--------------------------HHHHTTSCHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH--------------------------HHHhcCCcHHHHHHHH
Confidence            9999999999999987543   2333332221100000                          1112356789999999


Q ss_pred             HhcccCCCCCCCHHHHhc--CCccccccCCCCCCchhhh
Q psy7274         159 KMLTFNPHKRIGVEDALA--HPYLEQYYDPADEPVSWRE  195 (308)
Q Consensus       159 ~~L~~dP~~R~t~~eil~--hp~f~~~~~~~~~~~~~~~  195 (308)
                      +||..||.+||+++++++  ...+.......+..++|..
T Consensus       254 ~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~  292 (483)
T 3sv0_A          254 YCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTI  292 (483)
T ss_dssp             HHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHH
T ss_pred             HHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchh
Confidence            999999999999987764  1222222333344455543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.90  E-value=2.6e-24  Score=203.59  Aligned_cols=132  Identities=16%  Similarity=0.191  Sum_probs=99.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+................+|..|+|||++.+ ..++.++||||+||++
T Consensus       458 iHrDlkp~NILl~-------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~-~~~~~~sDvwSlGv~l  529 (613)
T 2ozo_A          458 VHRNLAARNVLLV-------NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTM  529 (613)
T ss_dssp             CCSCCSGGGEEEE-------ETTEEEECCCSTTTTCC--------------CCTTSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             EcCcCCHHHEEEc-------CCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       8899999999999876543221111223345688999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+.+..+....+......                              ...+.+++++.+||.+||..|
T Consensus       530 ~ellt~G~~Pf~~~~~~~~~~~i~~~~~~------------------------------~~p~~~~~~l~~li~~cl~~d  579 (613)
T 2ozo_A          530 WEALSYGQKPYKKMKGPEVMAFIEQGKRM------------------------------ECPPECPPELYALMSDCWIYK  579 (613)
T ss_dssp             HHHHTTSCCTTTTCCSHHHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHTTCSS
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCcCCHHHHHHHHHHcCCC
Confidence            99998 99999988876666555432111                              112356799999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |.+|||+++++
T Consensus       580 P~~RPs~~~l~  590 (613)
T 2ozo_A          580 WEDRPDFLTVE  590 (613)
T ss_dssp             TTTSCCHHHHH
T ss_pred             hhHCcCHHHHH
Confidence            99999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=5.3e-24  Score=183.87  Aligned_cols=134  Identities=16%  Similarity=0.194  Sum_probs=100.3

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC-CCCCccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      -.||||||+|||++       .++.+||+|||+|+....... .........+|..|+|||++.+ ..++.++||||+||
T Consensus       145 i~H~dikp~Nili~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~  216 (298)
T 3pls_A          145 FVHRDLAARNCMLD-------ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT-YRFTTKSDVWSFGV  216 (298)
T ss_dssp             CCCSCCSGGGEEEC-------TTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTT-CCCCHHHHHHHHHH
T ss_pred             cccCCCCcceEEEc-------CCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhcc-CCCChhhchhhHHH
Confidence            36999999999999       889999999999986543211 1111344578899999999864 55899999999999


Q ss_pred             HHHHHhhC-CCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMISN-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~g-~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++++|++| .++|.+.+..+....+......+                              .....+..+.++|.+||.
T Consensus       217 il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~  266 (298)
T 3pls_A          217 LLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP------------------------------QPEYCPDSLYQVMQQCWE  266 (298)
T ss_dssp             HHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC------------------------------CCccchHHHHHHHHHHcc
Confidence            99999995 56666655544443333221111                              112467899999999999


Q ss_pred             cCCCCCCCHHHHhc
Q psy7274         163 FNPHKRIGVEDALA  176 (308)
Q Consensus       163 ~dP~~R~t~~eil~  176 (308)
                      .||.+|||++++++
T Consensus       267 ~~p~~Rps~~~ll~  280 (298)
T 3pls_A          267 ADPAVRPTFRVLVG  280 (298)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.90  E-value=1.5e-24  Score=190.49  Aligned_cols=133  Identities=20%  Similarity=0.232  Sum_probs=101.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........ .......||..|+|||++.+ ..++.++||||+||++
T Consensus       186 vH~Dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  256 (333)
T 2i1m_A          186 IHRDVAARNVLLT-------NGHVAKIGDFGLARDIMNDSNY-IVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILL  256 (333)
T ss_dssp             ECSCCSGGGCEEE-------GGGEEEBCCCGGGCCGGGCTTS-EECSSCEECGGGSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEC-------CCCeEEECccccccccccccce-eecCCCCCCccccCHHHhcc-CCCChHHHHHHHHHHH
Confidence            6999999999998       8899999999999865433211 11234567889999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |..||.+......+..+......+                             ......+..+.++|.+||..|
T Consensus       257 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~~  307 (333)
T 2i1m_A          257 WEIFSLGLNPYPGILVNSKFYKLVKDGYQM-----------------------------AQPAFAPKNIYSIMQACWALE  307 (333)
T ss_dssp             HHHTTTSCCSSTTCCSSHHHHHHHHHTCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHcCCCCCCcccchhHHHHHHHhcCCCC-----------------------------CCCCCCCHHHHHHHHHHhccC
Confidence            99998 999998866544433332211000                             011235788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       308 p~~Rps~~~l~~  319 (333)
T 2i1m_A          308 PTHRPTFQQICS  319 (333)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.90  E-value=4.8e-25  Score=193.05  Aligned_cols=148  Identities=18%  Similarity=0.180  Sum_probs=100.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......  ......+||..|+|||++.+ ..++.++||||+||+
T Consensus       155 ivH~Dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~i  224 (326)
T 3uim_A          155 IIHRDVKAANILLD-------EEFEAVVGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVM  224 (326)
T ss_dssp             EECCCCSGGGEEEC-------TTCCEEECCCSSCEECCSSSS--CEECCCCSCGGGCCHHHHHH-SEECHHHHHHHHHHH
T ss_pred             eEeCCCchhhEEEC-------CCCCEEeccCccccccCcccc--cccccccCCcCccCHHHhcc-CCCCccccchhHHHH
Confidence            36999999999999       889999999999987653322  12345579999999999875 448999999999999


Q ss_pred             HHHHhhCCCCCCCCC-----HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCC-ccccCCCCChhHHHHHH
Q psy7274          85 LAEMISNRPIFPGKH-----YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP-WEILYPNADPNALDLLG  158 (308)
Q Consensus        85 l~ell~g~~pf~~~~-----~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~ll~  158 (308)
                      +++|++|+.||....     .......+.......   .+.               ...... .....+..+..+.+++.
T Consensus       225 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~---------------~~~~~~~~~~~~~~~~~~l~~li~  286 (326)
T 3uim_A          225 LLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK---KLE---------------ALVDVDLQGNYKDEEVEQLIQVAL  286 (326)
T ss_dssp             HHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC---CST---------------TSSCTTCTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHhCCCcccccccccccchhHHHHHHHHhhch---hhh---------------hhcChhhccccCHHHHHHHHHHHH
Confidence            999999999995211     000000000000000   000               000000 00111123467999999


Q ss_pred             HhcccCCCCCCCHHHHhcCCcc
Q psy7274         159 KMLTFNPHKRIGVEDALAHPYL  180 (308)
Q Consensus       159 ~~L~~dP~~R~t~~eil~hp~f  180 (308)
                      +||+.||.+|||++++++|-.-
T Consensus       287 ~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          287 LCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHhCcCCccCCCHHHHHHHhcC
Confidence            9999999999999999987543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.90  E-value=2.1e-24  Score=186.50  Aligned_cols=133  Identities=17%  Similarity=0.204  Sum_probs=100.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC-CCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+|+........ ........||..|+|||++.+ ..++.++||||+||+
T Consensus       150 ~H~dikp~Nil~~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  221 (298)
T 3f66_A          150 VHRDLAARNCMLD-------EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVL  221 (298)
T ss_dssp             CCSCCSGGGEEEC-------TTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             cCCCCchheEEEC-------CCCCEEECcccccccccccchhccccccCCCCCccccChHHhcC-CCCChHHHHHHHHHH
Confidence            7999999999999       8899999999999866432211 111344577889999999875 459999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +++|++ |.++|.+.+..+....+.......                              .....+..+.++|.+||..
T Consensus       222 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~  271 (298)
T 3f66_A          222 LWELMTRGAPPYPDVNTFDITVYLLQGRRLL------------------------------QPEYCPDPLYEVMLKCWHP  271 (298)
T ss_dssp             HHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHhCCCCCCccCCHHHHHHHHhcCCCCC------------------------------CCccCCHHHHHHHHHHcCC
Confidence            999999 667887766554444433211111                              1124578899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||.+|||++++++
T Consensus       272 ~p~~Rps~~ell~  284 (298)
T 3f66_A          272 KAEMRPSFSELVS  284 (298)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.90  E-value=3.2e-24  Score=196.09  Aligned_cols=127  Identities=19%  Similarity=0.284  Sum_probs=99.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      .....+|..|+|||++.+ ..++.++||||+||++
T Consensus       311 vHrDlkp~Nill~-------~~~~~kl~DfG~a~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l  376 (450)
T 1k9a_A          311 VHRDLAARNVLVS-------EDNVAKVSDFGLTKEASST------QDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILL  376 (450)
T ss_dssp             ECSCCCGGGEEEC-------TTSCEEECCCTTCEECC------------CCCTTTSCHHHHHS-SCCCHHHHHHHHHHHH
T ss_pred             eCCCCCHhhEEEC-------CCCCEEEeeCCCccccccc------ccCCCCCcceeCHHHhcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       8899999999999865432      122367889999999875 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |+.||.+.+..+....+......+                              ....+++.+.+||.+||..|
T Consensus       377 ~el~t~g~~P~~~~~~~~~~~~i~~~~~~~------------------------------~p~~~~~~l~~li~~cl~~d  426 (450)
T 1k9a_A          377 WEIYSFGRVPYPRIPLKDVVPRVEKGYKMD------------------------------APDGCPPAVYDVMKNCWHLD  426 (450)
T ss_dssp             HHHHTTTCCSSTTSCTTTHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCCcCCHHHHHHHHHHcCCC
Confidence            99998 999998876555444443211100                              12356799999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       427 p~~Rpt~~~l~~  438 (450)
T 1k9a_A          427 AATRPTFLQLRE  438 (450)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.90  E-value=4.1e-24  Score=182.92  Aligned_cols=131  Identities=21%  Similarity=0.287  Sum_probs=103.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........  ......+|..|+|||++.+ ..++.++||||+||++
T Consensus       131 ~H~dikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  200 (279)
T 1qpc_A          131 IHRDLRAANILVS-------DTLSCKIADFGLARLIEDNEYT--AREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILL  200 (279)
T ss_dssp             ECSCCSGGGEEEC-------TTSCEEECCCTTCEECSSSCEE--CCTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             eccCCCHhhEEEc-------CCCCEEECCCcccccccCcccc--cccCCCCccCccChhhhcc-CCCCchhhhHHHHHHH
Confidence            6999999999999       8899999999999876543211  1233467889999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+.+..+......                              ......+.++.++|.+||..|
T Consensus       201 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~~  250 (279)
T 1qpc_A          201 TEIVTHGRIPYPGMTNPEVIQNLERGYRM------------------------------VRPDNCPEELYQLMRLCWKER  250 (279)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCcccCHHHHHHHHhcccCC------------------------------CCcccccHHHHHHHHHHhccC
Confidence            99999 89999988776655544321110                              011346789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       251 p~~Rps~~~l~~  262 (279)
T 1qpc_A          251 PEDRPTFDYLRS  262 (279)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCCCHHHHHH
Confidence            999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.90  E-value=2.4e-24  Score=190.77  Aligned_cols=141  Identities=10%  Similarity=0.074  Sum_probs=101.1

Q ss_pred             CCCCCCCCCcccCccccccCCCC--CceEeccCCccccCCCCCC----CCCccCcccccccchhhHhhCCCCCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA--DEPICDFGLARVADPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~--~~ki~DFGla~~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiW   79 (308)
                      .||||||+|||++       .++  .+||+|||+|+........    ........||..|+|||++.+ ..++.++|||
T Consensus       181 vH~Dikp~NIl~~-------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~  252 (352)
T 2jii_A          181 VHGNVTAENIFVD-------PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG-CGPSRRSDLQ  252 (352)
T ss_dssp             BCSCCCGGGEEEE-------TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT-CCCCHHHHHH
T ss_pred             cCCCCCHHHEEEc-------CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc-CCCCchhhHH
Confidence            6999999999998       777  8999999999876432211    112245589999999999865 4599999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCC-HHHHHHHH-HHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHH
Q psy7274          80 SVGCILAEMISNRPIFPGKH-YLDQLNHI-LGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLL  157 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~-~~~~l~~i-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  157 (308)
                      |+||++++|++|+.||.+.. ....+... ......+..                    ...  .......+++++.+||
T Consensus       253 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~--~~~~~~~~~~~l~~li  310 (352)
T 2jii_A          253 SLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGP--------------------FVG--PCGHWIRPSETLQKYL  310 (352)
T ss_dssp             HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCC--------------------EEC--TTSCEECCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhh--------------------hhh--hccccCCCcHHHHHHH
Confidence            99999999999999997753 22222222 111111100                    000  0000124689999999


Q ss_pred             HHhcccCCCCCCCHHHHhc
Q psy7274         158 GKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~  176 (308)
                      .+||..||.+|||++++++
T Consensus       311 ~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          311 KVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhCChhhCCCHHHHHH
Confidence            9999999999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=3.3e-24  Score=188.34  Aligned_cols=142  Identities=19%  Similarity=0.232  Sum_probs=94.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC-CccCcccccccchhhHhhCCCCCCc------hhh
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG-FLTEYVATRWYRAPEIMLNSKGYTK------SID   77 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~------~~D   77 (308)
                      -.||||||+|||++       .++.+||+|||+|+.......... .....+||..|+|||++.+.. ++.      ++|
T Consensus       163 ivH~Dikp~Nill~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~~~~D  234 (337)
T 3mdy_A          163 IAHRDLKSKNILVK-------KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL-NRNHFQSYIMAD  234 (337)
T ss_dssp             EECSCCCGGGEEEC-------TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCC-CTTCTHHHHHHH
T ss_pred             EEecccchHHEEEC-------CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhccccc-CCccccCccccc
Confidence            36999999999999       889999999999987654322111 123568999999999986543 444      499


Q ss_pred             HHHHHHHHHHHhhC----------CCCCCCCC----HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcc
Q psy7274          78 IWSVGCILAEMISN----------RPIFPGKH----YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE  143 (308)
Q Consensus        78 iWSlG~il~ell~g----------~~pf~~~~----~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (308)
                      |||+||++|||++|          ..||.+..    ....+..+....                       ...+..+..
T Consensus       235 iwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~  291 (337)
T 3mdy_A          235 MYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK-----------------------KLRPSFPNR  291 (337)
T ss_dssp             HHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS-----------------------CCCCCCCGG
T ss_pred             hHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhh-----------------------ccCcccccc
Confidence            99999999999999          55554321    111111111110                       001111111


Q ss_pred             ccCCCCChhHHHHHHHhcccCCCCCCCHHHHhcC
Q psy7274         144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       144 ~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~h  177 (308)
                      .....++.++.+||.+||+.||.+|||+.++++|
T Consensus       292 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          292 WSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            1112345679999999999999999999999865

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.90  E-value=1.3e-24  Score=190.46  Aligned_cols=130  Identities=22%  Similarity=0.234  Sum_probs=100.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......    .....+|..|+|||++.+ ..++.++||||+||++
T Consensus       164 vH~dlkp~NIl~~-------~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  231 (327)
T 1fvr_A          164 IHRDLAARNILVG-------ENYVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLL  231 (327)
T ss_dssp             ECSCCSGGGEEEC-------GGGCEEECCTTCEESSCEECC----C----CCTTTCCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             cCCCCccceEEEc-------CCCeEEEcccCcCcccccccc----ccCCCCCccccChhhhcc-ccCCchhcchHHHHHH
Confidence            6999999999998       889999999999985432211    233467889999999865 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+....+......                              .....+++.+.+||.+||..|
T Consensus       232 ~ellt~g~~pf~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~d  281 (327)
T 1fvr_A          232 WEIVSLGGTPYCGMTCAELYEKLPQGYRL------------------------------EKPLNCDDEVYDLMRQCWREK  281 (327)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHGGGTCCC------------------------------CCCTTBCHHHHHHHHHHTCSS
T ss_pred             HHHHcCCCCCCCCCcHHHHHHHhhcCCCC------------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            99998 99999888765554443211000                              011246789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+++++++
T Consensus       282 p~~Rps~~ell~~  294 (327)
T 1fvr_A          282 PYERPSFAQILVS  294 (327)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999865

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.90  E-value=1.3e-24  Score=190.82  Aligned_cols=134  Identities=25%  Similarity=0.345  Sum_probs=82.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC---------CCccCcccccccchhhHhh--CCCCCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT---------GFLTEYVATRWYRAPEIML--NSKGYT   73 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~---------~~~~~~~gt~~y~aPE~l~--~~~~~~   73 (308)
                      -.||||||+|||++       .++.+||+|||+++.........         ......+||..|+|||++.  ....++
T Consensus       159 ivH~Dikp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  231 (337)
T 3ll6_A          159 IIHRDLKVENLLLS-------NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG  231 (337)
T ss_dssp             CBCCCCCGGGCEEC-------TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSS
T ss_pred             EEEccCCcccEEEC-------CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCC
Confidence            47999999999999       88999999999998765432110         0112457999999999973  234588


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhH
Q psy7274          74 KSIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNA  153 (308)
Q Consensus        74 ~~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  153 (308)
                      .++||||+||++++|++|+.||.+......+..   ....+                              .....+..+
T Consensus       232 ~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~------------------------------~~~~~~~~~  278 (337)
T 3ll6_A          232 EKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG---KYSIP------------------------------PHDTQYTVF  278 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCC---------------CCCC------------------------------TTCCSSGGG
T ss_pred             hHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC---cccCC------------------------------cccccchHH
Confidence            999999999999999999999976543221110   00000                              012346789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCC
Q psy7274         154 LDLLGKMLTFNPHKRIGVEDALAHP  178 (308)
Q Consensus       154 ~~ll~~~L~~dP~~R~t~~eil~hp  178 (308)
                      .+||.+||+.||.+|||++++++|-
T Consensus       279 ~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          279 HSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHH
Confidence            9999999999999999999999773

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.90  E-value=1.6e-24  Score=186.34  Aligned_cols=126  Identities=17%  Similarity=0.209  Sum_probs=95.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCC--------ceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPAD--------EPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID   77 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~--------~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~D   77 (308)
                      .||||||+|||++       .++.        +||+|||++.....       .....||..|+|||++.+...++.++|
T Consensus       135 vH~Dlkp~NIll~-------~~~~~~~~~~~~~kl~Dfg~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~D  200 (289)
T 4fvq_A          135 IHGNVCAKNILLI-------REEDRKTGNPPFIKLSDPGISITVLP-------KDILQERIPWVPPECIENPKNLNLATD  200 (289)
T ss_dssp             CCCCCCGGGEEEE-------ECCBGGGTBCCEEEECCCCSCTTTSC-------HHHHHHTTTTSCHHHHHCGGGCCHHHH
T ss_pred             ECCCcCcceEEEe-------cCCcccccccceeeeccCcccccccC-------ccccCCcCcccCHHHhCCCCCCCchhH
Confidence            6999999999998       5554        99999999876532       133468999999999876456999999


Q ss_pred             HHHHHHHHHHHhhCC-CCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHH
Q psy7274          78 IWSVGCILAEMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL  156 (308)
Q Consensus        78 iWSlG~il~ell~g~-~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  156 (308)
                      |||+||++++|++|. ++|.+.+............                                ......+.++.+|
T Consensus       201 iwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~l  248 (289)
T 4fvq_A          201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH--------------------------------QLPAPKAAELANL  248 (289)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--------------------------------CCCCCSSCTTHHH
T ss_pred             HHHHHHHHHHHHcCCCCCccccchHHHHHHhhccC--------------------------------CCCCCCCHHHHHH
Confidence            999999999999954 5565554433322221100                                0112346789999


Q ss_pred             HHHhcccCCCCCCCHHHHhcC
Q psy7274         157 LGKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~h  177 (308)
                      |.+||+.||.+|||++++++|
T Consensus       249 i~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          249 INNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999999865

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.90  E-value=4.1e-24  Score=182.90  Aligned_cols=127  Identities=18%  Similarity=0.276  Sum_probs=94.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||+++       .++.+||+|||+++......      ....+|..|+|||++.+ ..++.++||||+||++
T Consensus       139 ~H~dlkp~Nil~~-------~~~~~~l~Dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  204 (278)
T 1byg_A          139 VHRDLAARNVLVS-------EDNVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILL  204 (278)
T ss_dssp             CCSCCSGGGEEEC-------TTSCEEECCCCC------------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             cccCCCcceEEEe-------CCCcEEEeeccccccccccc------cCCCccccccCHHHhCC-CCCCchhcHHHHHHHH
Confidence            6999999999998       88999999999998654321      23367889999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++ |+.||.+.+..+....+.....                              .......++.+.++|.+||..|
T Consensus       205 ~~l~t~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~~  254 (278)
T 1byg_A          205 WEIYSFGRVPYPRIPLKDVVPRVEKGYK------------------------------MDAPDGCPPAVYEVMKNCWHLD  254 (278)
T ss_dssp             HHHHTTSCCSCTTSCGGGHHHHHTTTCC------------------------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhcCCC------------------------------CCCcccCCHHHHHHHHHHhcCC
Confidence            99998 9999987665444333321100                              0112356889999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       255 p~~Rps~~~l~~  266 (278)
T 1byg_A          255 AAMRPSFLQLRE  266 (278)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCCCHHHHHH
Confidence            999999999874

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.90  E-value=1.3e-23  Score=178.69  Aligned_cols=128  Identities=15%  Similarity=0.203  Sum_probs=100.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC--CCCchhhHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK--GYTKSIDIWSVG   82 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~~~DiWSlG   82 (308)
                      -.||||||+|||++       .++.++|+|||++.....        ...+||+.|+|||++.+..  .++.++||||+|
T Consensus       134 i~H~dikp~Nil~~-------~~~~~~l~~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG  198 (271)
T 3kmu_A          134 IPRHALNSRSVMID-------EDMTARISMADVKFSFQS--------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA  198 (271)
T ss_dssp             CTTCCCSGGGEEEC-------TTSCEEEEGGGSCCTTSC--------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHH
T ss_pred             eecCCCccceEEEc-------CCcceeEEeccceeeecc--------cCccCCccccChhhhccCCCCCCCchhhHHHHH
Confidence            47999999999999       889999999988765322        3347899999999987532  133489999999


Q ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          83 CILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        83 ~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      |++++|++|+.||.+.+..+....+......+                             .....+++++.++|.+||+
T Consensus       199 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~  249 (271)
T 3kmu_A          199 VLLWELVTREVPFADLSNMEIGMKVALEGLRP-----------------------------TIPPGISPHVSKLMKICMN  249 (271)
T ss_dssp             HHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC-----------------------------CCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCCCccccChHHHHHHHHhcCCCC-----------------------------CCCCCCCHHHHHHHHHHcC
Confidence            99999999999999887766555443221111                             1123568999999999999


Q ss_pred             cCCCCCCCHHHHhc
Q psy7274         163 FNPHKRIGVEDALA  176 (308)
Q Consensus       163 ~dP~~R~t~~eil~  176 (308)
                      .||.+|||++++++
T Consensus       250 ~~p~~Rps~~~il~  263 (271)
T 3kmu_A          250 EDPAKRPKFDMIVP  263 (271)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.90  E-value=3.3e-24  Score=198.25  Aligned_cols=131  Identities=16%  Similarity=0.256  Sum_probs=102.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........  ......+|..|+|||++.+ ..++.++||||+||++
T Consensus       340 vHrDlkp~NIll~-------~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l  409 (495)
T 1opk_A          340 IHRNLAARNCLVG-------ENHLVKVADFGLSRLMTGDTYT--AHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLL  409 (495)
T ss_dssp             ECSCCSGGGEEEC-------GGGCEEECCTTCEECCTTCCEE--CCTTCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEEC-------CCCcEEEeecccceeccCCcee--ecCCCcCCcceeCHhHHhc-CCCCcHHhHHhHHHHH
Confidence            6999999999998       8899999999999876432211  1233456789999999875 4589999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++ |..||.+.+..+....+......                              .....+++.+.+||.+||+.|
T Consensus       410 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~d  459 (495)
T 1opk_A          410 WEIATYGMSPYPGIDLSQVYELLEKDYRM------------------------------ERPEGCPEKVYELMRACWQWN  459 (495)
T ss_dssp             HHHHTTSCCSSTTCCGGGHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCCCCHHHHHHHHHHcCcC
Confidence            99999 99999887765544433221110                              012356789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.++++
T Consensus       460 P~~RPs~~el~~  471 (495)
T 1opk_A          460 PSDRPSFAEIHQ  471 (495)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.90  E-value=6.2e-24  Score=184.75  Aligned_cols=134  Identities=24%  Similarity=0.312  Sum_probs=91.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||++........  ......+||..|+|||++.+ ..++.++||||+||+
T Consensus       155 i~H~dlkp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i  224 (309)
T 2h34_A          155 ATHRDVKPENILVS-------ADDFAYLVDFGIASATTDEKL--TQLGNTVGTLYYMAPERFSE-SHATYRADIYALTCV  224 (309)
T ss_dssp             CCCSCCCGGGEEEC-------TTSCEEECSCCC------------------CCGGGCCGGGTCC-----CCCHHHHHHHH
T ss_pred             CCcCCCChHHEEEc-------CCCCEEEecCccCcccccccc--ccccccCCCcCccCHHHHcC-CCCCchHhHHHHHHH
Confidence            36999999999999       889999999999987643321  11345689999999999864 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +++|++|+.||.+.+.......+. . ..+.                          .....+.++..+.++|.+||..|
T Consensus       225 l~~l~~g~~pf~~~~~~~~~~~~~-~-~~~~--------------------------~~~~~~~~~~~l~~li~~~l~~d  276 (309)
T 2h34_A          225 LYECLTGSPPYQGDQLSVMGAHIN-Q-AIPR--------------------------PSTVRPGIPVAFDAVIARGMAKN  276 (309)
T ss_dssp             HHHHHHSSCSSCSCHHHHHHHHHH-S-CCCC--------------------------GGGTSTTCCTHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCCCchHHHHHHHhc-c-CCCC--------------------------ccccCCCCCHHHHHHHHHhccCC
Confidence            999999999998765442222221 1 0010                          11223467899999999999999


Q ss_pred             CCCCC-CHHHHhc
Q psy7274         165 PHKRI-GVEDALA  176 (308)
Q Consensus       165 P~~R~-t~~eil~  176 (308)
                      |.+|| |++++++
T Consensus       277 P~~Rp~s~~~l~~  289 (309)
T 2h34_A          277 PEDRYVTCGDLSA  289 (309)
T ss_dssp             GGGSCSSHHHHHH
T ss_pred             HHHHHHhHHHHHH
Confidence            99999 7887763

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.89  E-value=1.5e-24  Score=190.05  Aligned_cols=148  Identities=18%  Similarity=0.211  Sum_probs=101.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................||..|+|||++.+ ..++.++||||+||++
T Consensus       149 vH~Dikp~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  220 (327)
T 3lxl_A          149 VHRDLAARNILVE-------SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVVL  220 (327)
T ss_dssp             ECSCCSGGGEEEE-------ETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             cCCCCChhhEEEC-------CCCCEEEcccccceecccCCccceeeccCCccccccCHHHhcc-CCCChHHhHHHHHHHH
Confidence            6999999999998       8899999999999977544322222344578889999999875 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCCh-hhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTP-EDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+.||.+...... ..    ...... .....     ..........      ....+.+++.+.+||.+||..|
T Consensus       221 ~~ll~g~~p~~~~~~~~~-~~----~~~~~~~~~~~~-----~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~d  284 (327)
T 3lxl_A          221 YELFTYCDKSCSPSAEFL-RM----MGCERDVPALSR-----LLELLEEGQR------LPAPPACPAEVHELMKLCWAPS  284 (327)
T ss_dssp             HHHHTTTCGGGSHHHHHH-HH----CC----CCHHHH-----HHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCccccchhh-hh----cccccccccHHH-----HHHHhhcccC------CCCCCcccHHHHHHHHHHcCCC
Confidence            999999999865432111 10    000000 00000     0001111000      0112457899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+++++++
T Consensus       285 P~~Rps~~ell~~  297 (327)
T 3lxl_A          285 PQDRPSFSALGPQ  297 (327)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.89  E-value=8.2e-24  Score=201.51  Aligned_cols=132  Identities=22%  Similarity=0.322  Sum_probs=102.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+|+.........  .....+|..|+|||++.+ ..++.++||||+||+
T Consensus       512 ivHrDikp~NILl~-------~~~~vkL~DFG~a~~~~~~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~i  581 (656)
T 2j0j_A          512 FVHRDIAARNVLVS-------SNDCVKLGDFGLSRYMEDSTYYK--ASKGKLPIKWMAPESINF-RRFTSASDVWMFGVC  581 (656)
T ss_dssp             CCCSCCSGGGEEEE-------ETTEEEECCCCCCCSCCC------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHH
T ss_pred             ccccccchHhEEEe-------CCCCEEEEecCCCeecCCCccee--ccCCCCCcceeCHHHhcC-CCCCchhhHHHHHHH
Confidence            36999999999998       88999999999998765432211  234467889999999875 459999999999999


Q ss_pred             HHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++||++ |..||.+.+..+.+..+......+                              ..+.+++.+.+||.+||..
T Consensus       582 l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~  631 (656)
T 2j0j_A          582 MWEILMHGVKPFQGVKNNDVIGRIENGERLP------------------------------MPPNCPPTLYSLMTKCWAY  631 (656)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCccccHHHHHHHHHHcCC
Confidence            999997 999999988777666654321111                              1235678999999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy7274         164 NPHKRIGVEDALA  176 (308)
Q Consensus       164 dP~~R~t~~eil~  176 (308)
                      ||.+|||+.++++
T Consensus       632 dP~~RPs~~el~~  644 (656)
T 2j0j_A          632 DPSRRPRFTELKA  644 (656)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhHCcCHHHHHH
Confidence            9999999999874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.89  E-value=1.2e-23  Score=182.82  Aligned_cols=135  Identities=22%  Similarity=0.373  Sum_probs=97.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-----------CCccCcccccccchhhHhhCCCCCCc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-----------GFLTEYVATRWYRAPEIMLNSKGYTK   74 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-----------~~~~~~~gt~~y~aPE~l~~~~~~~~   74 (308)
                      .||||||+|||++       .++.+||+|||+++.........           ......+||+.|+|||++.+ ..++.
T Consensus       130 vH~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~  201 (310)
T 3s95_A          130 IHRDLNSHNCLVR-------ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING-RSYDE  201 (310)
T ss_dssp             ECSCCSTTSEEEC-------TTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTT-CCCCT
T ss_pred             cCCCCCcCeEEEC-------CCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcC-CCCCc
Confidence            6999999999999       89999999999998764332111           01125689999999999865 56999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHH
Q psy7274          75 SIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNAL  154 (308)
Q Consensus        75 ~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  154 (308)
                      ++||||+||++++|++|..+|........              .....    ......          ....+.+++.+.
T Consensus       202 ~~Di~slG~~l~el~~g~~~~~~~~~~~~--------------~~~~~----~~~~~~----------~~~~~~~~~~l~  253 (310)
T 3s95_A          202 KVDVFSFGIVLCEIIGRVNADPDYLPRTM--------------DFGLN----VRGFLD----------RYCPPNCPPSFF  253 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTCCSSTTTSCBCT--------------TSSBC----HHHHHH----------HTCCTTCCTTHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcchhhhHH--------------HHhhh----hhcccc----------ccCCCCCCHHHH
Confidence            99999999999999999988865321000              00000    000000          001235678999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhc
Q psy7274         155 DLLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       155 ~ll~~~L~~dP~~R~t~~eil~  176 (308)
                      ++|.+||..||.+|||++++++
T Consensus       254 ~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          254 PITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.89  E-value=4e-23  Score=180.11  Aligned_cols=135  Identities=16%  Similarity=0.141  Sum_probs=97.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC--CCCCccCcccccccchhhHhhC--------CCCCCc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD--HTGFLTEYVATRWYRAPEIMLN--------SKGYTK   74 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~--~~~~~~~~~gt~~y~aPE~l~~--------~~~~~~   74 (308)
                      -.||||||+|||++        ++.+||+|||+++.......  .........||..|+|||++.+        ...++.
T Consensus       151 i~H~dlkp~NIl~~--------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~  222 (319)
T 2y4i_B          151 ILHKDLKSKNVFYD--------NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSK  222 (319)
T ss_dssp             CCCCCCCSTTEEEC----------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCH
T ss_pred             ccccCCChhhEEEe--------CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCc
Confidence            37999999999996        47899999999876532111  1112344579999999999864        234789


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHH
Q psy7274          75 SIDIWSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNAL  154 (308)
Q Consensus        75 ~~DiWSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  154 (308)
                      ++||||+||++++|++|+.||.+.........+......                         .    .....++.++.
T Consensus       223 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~----~~~~~~~~~l~  273 (319)
T 2y4i_B          223 HSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP-------------------------N----LSQIGMGKEIS  273 (319)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC-------------------------C----CCCSSCCTTHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC-------------------------C----CCcCCCCHHHH
Confidence            999999999999999999999887766555444321100                         0    00124678999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhc
Q psy7274         155 DLLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       155 ~ll~~~L~~dP~~R~t~~eil~  176 (308)
                      ++|.+||..||.+|||++++++
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999984

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.89  E-value=6.6e-24  Score=197.98  Aligned_cols=131  Identities=24%  Similarity=0.328  Sum_probs=103.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........  ......+|..|+|||++.+. .++.++||||+||++
T Consensus       385 vHrDlkp~NIll~-------~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~sDvwSlGv~l  454 (535)
T 2h8h_A          385 VHRDLRAANILVG-------ENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILL  454 (535)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCTTSTTTCCCHHHH--TTCSTTSCGGGSCHHHHHHC-CCCHHHHHHHHHHHH
T ss_pred             eCCCCCHhhEEEc-------CCCcEEEcccccceecCCCcee--cccCCcCcccccCHHHhccC-CCCchhhHHHHHHHH
Confidence            7999999999998       8899999999999876432100  11234567899999998754 599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+....+.+..+......+                              ....++..+.+||.+||..|
T Consensus       455 ~el~t~g~~P~~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~cl~~d  504 (535)
T 2h8h_A          455 TELTTKGRVPYPGMVNREVLDQVERGYRMP------------------------------CPPECPESLHDLMCQCWRKE  504 (535)
T ss_dssp             HHHTTTTCCSSTTCCHHHHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            99999 999999988776665554321111                              11346789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       505 P~~RPt~~~l~~  516 (535)
T 2h8h_A          505 PEERPTFEYLQA  516 (535)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.89  E-value=7.6e-24  Score=183.30  Aligned_cols=148  Identities=18%  Similarity=0.315  Sum_probs=102.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+................||..|+|||++.+ ..++.++||||+||++
T Consensus       148 ~H~dikp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  219 (302)
T 4e5w_A          148 VHRDLAARNVLVE-------SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTL  219 (302)
T ss_dssp             ECSCCSGGGEEEE-------ETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             ccCCCchheEEEc-------CCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecC-CCCCcchhHHHHHHHH
Confidence            6999999999998       8899999999999887654322222345678899999999875 4588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..|+...     ...+....+.........    ...........      ....+.+++.+.+||.+||..||
T Consensus       220 ~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp  284 (302)
T 4e5w_A          220 HELLTYCDSDSSP-----MALFLKMIGPTHGQMTVT----RLVNTLKEGKR------LPCPPNCPDEVYQLMRKCWEFQP  284 (302)
T ss_dssp             HHHHTTTCGGGSH-----HHHHHHHHCSCCGGGHHH----HHHHHHHTTCC------CCCCTTCCHHHHHHHHHTTCSSG
T ss_pred             HHHHHccCCCcch-----hhHHhhccCCcccccCHH----HHHHHHhccCC------CCCCCCCCHHHHHHHHHHcCCCC
Confidence            9999999876322     122222223222211110    11111111110      01224578999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy7274         166 HKRIGVEDALA  176 (308)
Q Consensus       166 ~~R~t~~eil~  176 (308)
                      .+|||++++++
T Consensus       285 ~~Rps~~~ll~  295 (302)
T 4e5w_A          285 SNRTSFQNLIE  295 (302)
T ss_dssp             GGSCCHHHHHH
T ss_pred             CCCCCHHHHHH
Confidence            99999999874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.89  E-value=1.8e-24  Score=203.84  Aligned_cols=159  Identities=21%  Similarity=0.241  Sum_probs=103.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCC---ceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPAD---EPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~---~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      -.||||||+|||++       .++.   +||+|||+++.......    ....+||..|+|||++.+ ..++.++||||+
T Consensus       142 IVHrDLKP~NILl~-------~~g~~~~vKL~DFG~a~~~~~~~~----~~~~~gt~~Y~APE~l~~-~~~s~ksDIwSL  209 (676)
T 3qa8_A          142 IIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKELDQGEL----CTEFVGTLQYLAPELLEQ-KKYTVTVDYWSF  209 (676)
T ss_dssp             BCCCCCCSTTEEEE-------CCSSSCEEEECSCCCCCBTTSCCC----CCCCCSCCTTCSSCSSCC-SCCSTTHHHHHH
T ss_pred             CccCCCCHHHeEee-------cCCCceeEEEcccccccccccccc----cccccCCcccCChHHhcc-CCCCchhHHHHH
Confidence            37999999999998       4444   89999999987654322    345689999999999864 569999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCC-ccccCCCCChhHHHHHHHh
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVP-WEILYPNADPNALDLLGKM  160 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~ll~~~  160 (308)
                      ||++|+|++|..||.+......+....   ...........  .   ............+ ...+.+.++..+.+||.+|
T Consensus       210 GviLyeLltG~~Pf~~~~~~~~~~~~i---~~~~~~~~~~~--~---~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~m  281 (676)
T 3qa8_A          210 GTLAFECITGFRPFLPNWQPVQWHGKV---REKSNEHIVVY--D---DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCM  281 (676)
T ss_dssp             HHHHHHHHSSCSSCCSSCHHHHSSTTC---C------CCSC--C---CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcccchhhhhhhh---hcccchhhhhh--h---hhccccccccccCCchhhchhhhHHHHHHHHHH
Confidence            999999999999998765432211100   00000000000  0   0000000000000 1112234568899999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |..||.+|||++++++||||+.+
T Consensus       282 L~~DP~kRPTa~elL~hp~F~~l  304 (676)
T 3qa8_A          282 LMWHQRQRGTDPQNPNVGCFQAL  304 (676)
T ss_dssp             SCSSCC---CCTTCCCCTTHHHH
T ss_pred             ccCCHhhCcCHHHHhcCHHHHHH
Confidence            99999999999999999999763

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.89  E-value=3.2e-24  Score=186.15  Aligned_cols=146  Identities=21%  Similarity=0.267  Sum_probs=100.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ ......+||..|+|||++.+  .++.++||||+||++
T Consensus       155 ~H~dlkp~Nili~-------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~Dv~slG~il  224 (307)
T 2nru_A          155 IHRDIKSANILLD-------EAFTAKISDFGLARASEKFAQT-VMTSRIVGTTAYMAPEALRG--EITPKSDIYSFGVVL  224 (307)
T ss_dssp             ECSCCCGGGEEEC-------TTCCEEECCCTTCEECCSCSSC-EECSSCCSCGGGCCHHHHTT--EECTHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEc-------CCCcEEEeeccccccccccccc-ccccccCCCcCcCChHHhcC--CCCccchhHHHHHHH
Confidence            6999999999999       8899999999999876532211 11234579999999998753  389999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..||.+......+..+......... .+        ..+...       .........+..+.+++.+||..||
T Consensus       225 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~-------~~~~~~~~~~~~l~~li~~cl~~~p  288 (307)
T 2nru_A          225 LEIITGLPAVDEHREPQLLLDIKEEIEDEEK-TI--------EDYIDK-------KMNDADSTSVEAMYSVASQCLHEKK  288 (307)
T ss_dssp             HHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC-CH--------HHHSCS-------SCSCCCHHHHHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCcccCcchHHHHHHHHHhhhhhh-hh--------hhhccc-------cccccchHHHHHHHHHHHHHcCCCc
Confidence            9999999999775533222222211110000 00        000000       0000111234678999999999999


Q ss_pred             CCCCCHHHHhcC
Q psy7274         166 HKRIGVEDALAH  177 (308)
Q Consensus       166 ~~R~t~~eil~h  177 (308)
                      .+|||+++++++
T Consensus       289 ~~Rps~~~l~~~  300 (307)
T 2nru_A          289 NKRPDIKKVQQL  300 (307)
T ss_dssp             TTSCCHHHHHHH
T ss_pred             ccCcCHHHHHHH
Confidence            999999999853

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.89  E-value=5.6e-24  Score=185.78  Aligned_cols=148  Identities=16%  Similarity=0.195  Sum_probs=100.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................||..|+|||++.+ ..++.++||||+||++
T Consensus       156 vH~Dikp~Nil~~-------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  227 (318)
T 3lxp_A          156 IHRDLAARNVLLD-------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE-YKFYYASDVWSFGVTL  227 (318)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             cCCCCchheEEEc-------CCCCEEECCccccccccccccccccccCCCCCceeeChHHhcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       8899999999999987544322122344578889999999875 4588999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|+.||......     .....+......-.    ............      ......++.++.+||.+||..||
T Consensus       228 ~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP  292 (318)
T 3lxp_A          228 YELLTHCDSSQSPPTK-----FLELIGIAQGQMTV----LRLTELLERGER------LPRPDKCPAEVYHLMKNCWETEA  292 (318)
T ss_dssp             HHHHTTTCGGGSHHHH-----HHHHHCSCCHHHHH----HHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHhCCCcccccchh-----hhhhhcccccchhH----HHHHHHHhcccC------CCCCccccHHHHHHHHHHcCCCc
Confidence            9999999998653211     11111111111000    001111111110      01123568999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy7274         166 HKRIGVEDALA  176 (308)
Q Consensus       166 ~~R~t~~eil~  176 (308)
                      .+|||++++++
T Consensus       293 ~~Rps~~ell~  303 (318)
T 3lxp_A          293 SFRPTFENLIP  303 (318)
T ss_dssp             GGSCCHHHHHH
T ss_pred             ccCcCHHHHHH
Confidence            99999999983

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.89  E-value=1.7e-23  Score=181.94  Aligned_cols=132  Identities=23%  Similarity=0.355  Sum_probs=88.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+||+++       .++.+||+|||+++.......   ......||..|+|||++.+ ..++.++||||+||+
T Consensus       157 i~H~dl~p~NIl~~-------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i  225 (310)
T 2wqm_A          157 VMHRDIKPANVFIT-------ATGVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCL  225 (310)
T ss_dssp             CCCCCCCGGGEEEC-------TTSCEEECCC---------------------CCSSCCHHHHTT-CCCCHHHHHHHHHHH
T ss_pred             eeCCCCcHHHEEEc-------CCCCEEEEeccceeeecCCCc---cccccCCCeeEeChHHhCC-CCCCchhhHHHHHHH
Confidence            37999999999999       889999999999987643321   1244578999999999865 558999999999999


Q ss_pred             HHHHhhCCCCCCCCCH--HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHY--LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~--~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      +++|++|..||.+...  ......+. ....+                        .    ......+.++.+||.+||.
T Consensus       226 l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~------------------------~----~~~~~~~~~l~~li~~~l~  276 (310)
T 2wqm_A          226 LYEMAALQSPFYGDKMNLYSLCKKIE-QCDYP------------------------P----LPSDHYSEELRQLVNMCIN  276 (310)
T ss_dssp             HHHHHHSSCTTC---CCHHHHHHHHH-TTCSC------------------------C----CCTTTSCHHHHHHHHHHTC
T ss_pred             HHHHHhCCCCCcccchhHHHHHHHhh-cccCC------------------------C----CcccccCHHHHHHHHHHcC
Confidence            9999999999976431  11111111 10000                        0    0013467899999999999


Q ss_pred             cCCCCCCCHHHHhc
Q psy7274         163 FNPHKRIGVEDALA  176 (308)
Q Consensus       163 ~dP~~R~t~~eil~  176 (308)
                      .||.+|||++++++
T Consensus       277 ~dp~~Rps~~~il~  290 (310)
T 2wqm_A          277 PDPEKRPDVTYVYD  290 (310)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.88  E-value=8.5e-24  Score=181.23  Aligned_cols=128  Identities=22%  Similarity=0.299  Sum_probs=99.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.......    .....||..|+|||++.+ ..++.++||||+||++
T Consensus       144 ~H~dlkp~Nil~~-------~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  211 (284)
T 2a19_B          144 INRDLKPSNIFLV-------DTKQVKIGDFGLVTSLKNDGK----RTRSKGTLRYMSPEQISS-QDYGKEVDLYALGLIL  211 (284)
T ss_dssp             ECSCCSGGGEEEE-------ETTEEEECCCTTCEESSCCSC----CCCCCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHH
T ss_pred             eeccCCHHHEEEc-------CCCCEEECcchhheecccccc----ccccCCcccccChhhhcc-CCCcchhhhHHHHHHH
Confidence            6999999999998       889999999999987654322    244579999999999875 5589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..++.+..  .....+.                       .          .......+..+.++|.+||..||
T Consensus       212 ~~l~~~~~~~~~~~--~~~~~~~-----------------------~----------~~~~~~~~~~~~~li~~~l~~dp  256 (284)
T 2a19_B          212 AELLHVCDTAFETS--KFFTDLR-----------------------D----------GIISDIFDKKEKTLLQKLLSKKP  256 (284)
T ss_dssp             HHHHSCCSSHHHHH--HHHHHHH-----------------------T----------TCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHhcCCcchhHH--HHHHHhh-----------------------c----------ccccccCCHHHHHHHHHHccCCh
Confidence            99999987763211  0110000                       0          00112467899999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||+.++++|.+.
T Consensus       257 ~~Rps~~e~l~~l~~  271 (284)
T 2a19_B          257 EDRPNTSEILRTLTV  271 (284)
T ss_dssp             GGSCCHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHH
Confidence            999999999998766

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.88  E-value=3.9e-23  Score=181.96  Aligned_cols=142  Identities=18%  Similarity=0.217  Sum_probs=96.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCCC-----CCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSKG-----YTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~-----~~~~~DiW   79 (308)
                      .||||||+|||++       .++.+||+|||+++......... ......+||..|+|||++.+...     ++.++|||
T Consensus       169 vH~Dlkp~NIll~-------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~  241 (342)
T 1b6c_B          169 AHRDLKSKNILVK-------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  241 (342)
T ss_dssp             ECSCCSGGGEEEC-------TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHH
T ss_pred             eeCCCCHHHEEEC-------CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHH
Confidence            6999999999999       88999999999998765432110 01245589999999999865422     23689999


Q ss_pred             HHHHHHHHHhhC----------CCCCCCCCH----HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcccc
Q psy7274          80 SVGCILAEMISN----------RPIFPGKHY----LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL  145 (308)
Q Consensus        80 SlG~il~ell~g----------~~pf~~~~~----~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (308)
                      |+||++|+|++|          ..||.+...    ...+.......                       ...+..+....
T Consensus       242 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~  298 (342)
T 1b6c_B          242 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ-----------------------KLRPNIPNRWQ  298 (342)
T ss_dssp             HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS-----------------------CCCCCCCGGGG
T ss_pred             HHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHH-----------------------HhCCCCccccc
Confidence            999999999999          667754321    11111111000                       00011110001


Q ss_pred             CCCCChhHHHHHHHhcccCCCCCCCHHHHhcC
Q psy7274         146 YPNADPNALDLLGKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       146 ~~~~s~~~~~ll~~~L~~dP~~R~t~~eil~h  177 (308)
                      ....+..+.+||.+||..||.+|||++++++|
T Consensus       299 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          299 SCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             TSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            11234578899999999999999999999865

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.88  E-value=1.7e-23  Score=181.08  Aligned_cols=126  Identities=21%  Similarity=0.364  Sum_probs=87.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    ...++.+||+|||+|....                          +..++.++||||+||++
T Consensus       139 ~H~dlkp~Nil~~~----~~~~~~~kl~Dfg~a~~~~--------------------------~~~~~~~~DiwslG~il  188 (299)
T 3m2w_A          139 AHRDVKPENLLYTS----KRPNAILKLTDFGFAKETT--------------------------GEKYDKSCDMWSLGVIM  188 (299)
T ss_dssp             ECCCCSGGGEEESS----SSTTCCEEECCCTTCEECT--------------------------TCGGGGHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEEec----CCCCCcEEEeccccccccc--------------------------cccCCchhhHHHHHHHH
Confidence            69999999999981    0117889999999986532                          12377899999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCc-cccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW-EILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      ++|++|+.||.+.+.......+.....                        .....+ ......+++++.+||.+||..|
T Consensus       189 ~el~tg~~pf~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~d  244 (299)
T 3m2w_A          189 YILLCGYPPFYSNHGLAISPGMKTRIR------------------------MGQYEFPNPEWSEVSEEVKMLIRNLLKTE  244 (299)
T ss_dssp             HHHHHSSCSCCC-------CCSCCSSC------------------------TTCCSSCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHCCCCCCCCcchhhhHHHHHHHh------------------------hccccCCchhcccCCHHHHHHHHHHcccC
Confidence            999999999977553321111000000                        000000 0111357899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~  185 (308)
                      |.+|||++|+++||||.....
T Consensus       245 P~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          245 PTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             TTTSCCHHHHHTSHHHHTGGG
T ss_pred             hhhCCCHHHHhcChhhccccc
Confidence            999999999999999976543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.88  E-value=6.2e-24  Score=191.10  Aligned_cols=152  Identities=17%  Similarity=0.277  Sum_probs=99.6

Q ss_pred             CCCCCCCCCccc----CccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC-------CCCCc
Q psy7274           6 PHKRIGVEGALA----HPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS-------KGYTK   74 (308)
Q Consensus         6 ~HrDlKp~Nili----~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~   74 (308)
                      .||||||+|||+    +       .++.+||+|||+|+.......    ....+||..|+|||++.+.       ..++.
T Consensus       134 vH~Dlkp~NIll~~~~~-------~~~~~kL~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  202 (396)
T 4eut_A          134 VHRNIKPGNIMRVIGED-------GQSVYKLTDFGAARELEDDEQ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGA  202 (396)
T ss_dssp             ECCCCCGGGEEEEECTT-------SCEEEEECCGGGCEECCCGGG----SSCSSSCCTTCCHHHHHHHCC--CHHHHHHH
T ss_pred             EECCcCHHHEEEeecCC-------CceeEEEecCCCceEccCCCc----cccccCCccccCHHHhhccccccccccCCCc
Confidence            699999999998    5       677899999999987654321    3456899999999998541       34788


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHHhhCCCChhhHhhhhhHHHH--HHhhcCCCCCCCCccccCCC
Q psy7274          75 SIDIWSVGCILAEMISNRPIFPGKH----YLDQLNHILGILGSPTPEDLSCIINEKAR--SYLQSLPFKPKVPWEILYPN  148 (308)
Q Consensus        75 ~~DiWSlG~il~ell~g~~pf~~~~----~~~~l~~i~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  148 (308)
                      ++||||+||++|||++|+.||.+..    ..+.+..+..   ..++..+..+......  .+....+.     ...+...
T Consensus       203 ~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~  274 (396)
T 4eut_A          203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT---GKPSGAISGVQKAENGPIDWSGDMPV-----SCSLSRG  274 (396)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH---SCCTTCCEEEECSTTCCEEEESSCCT-----TCSSCHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc---CCCcccchhheeccCCCcccCccCCc-----ccccchH
Confidence            9999999999999999999996432    2333333332   2222111111000000  00000000     0011122


Q ss_pred             CChhHHHHHHHhcccCCCCCCCHHHHhc
Q psy7274         149 ADPNALDLLGKMLTFNPHKRIGVEDALA  176 (308)
Q Consensus       149 ~s~~~~~ll~~~L~~dP~~R~t~~eil~  176 (308)
                      .+..+.++|.+||+.||.+|+|+.++++
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          275 LQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             HHhhchHHHHHhhccChhhhccHHHHHH
Confidence            4567889999999999999999998754

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.87  E-value=2e-23  Score=185.70  Aligned_cols=136  Identities=13%  Similarity=0.023  Sum_probs=93.3

Q ss_pred             CCCCCCCCCcccCcccc----ccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLE----QYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~----~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++....    ....++.+||+|||+|+....... ....+..+||..|+|||++.+ ..|+.++||||+
T Consensus       194 vHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diwsl  271 (365)
T 3e7e_A          194 IHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK-GTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGV  271 (365)
T ss_dssp             ECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-TEEECCSSCTTSCCCHHHHTT-CCBSTHHHHHHH
T ss_pred             ecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-CceeeeecCCCCCCChHHhcC-CCCCccccHHHH
Confidence            69999999999981000    011179999999999976532211 122456789999999999875 459999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|||++|+.||.+.....              ...               .    ..+..  ...++...+++.+||
T Consensus       272 G~il~elltg~~pf~~~~~~~--------------~~~---------------~----~~~~~--~~~~~~~~~~~~~~l  316 (365)
T 3e7e_A          272 AATVYCMLFGTYMKVKNEGGE--------------CKP---------------E----GLFRR--LPHLDMWNEFFHVML  316 (365)
T ss_dssp             HHHHHHHHHSSCCCEEEETTE--------------EEE---------------C----SCCTT--CSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCccccCCCCc--------------eee---------------c----hhccc--cCcHHHHHHHHHHHc
Confidence            999999999999985432100              000               0    00000  012467889999999


Q ss_pred             ccCCCCCCCHHHHhcCC
Q psy7274         162 TFNPHKRIGVEDALAHP  178 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp  178 (308)
                      ..+|.+|++..+.+.+.
T Consensus       317 ~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          317 NIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             CCCCTTCCCCHHHHHHH
T ss_pred             CCCCCCcchHHHHHHHH
Confidence            99999997655544443

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.87  E-value=1.1e-22  Score=178.11  Aligned_cols=149  Identities=15%  Similarity=0.205  Sum_probs=101.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++................+|..|+|||++.+ ..++.++||||+||++
T Consensus       167 vH~dikp~NIli~-------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  238 (326)
T 2w1i_A          167 IHRDLATRNILVE-------NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVL  238 (326)
T ss_dssp             ECSCCCGGGEEEE-------ETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             eccCCCcceEEEc-------CCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcC-CCCCchhhHHHHHHHH
Confidence            6999999999998       8899999999999877543221111233467888999999875 4589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|..+|....  .   ......+........   ..............      .....++.++.+||.+||..||
T Consensus       239 ~el~tg~~~~~~~~--~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP  304 (326)
T 2w1i_A          239 YELFTYIEKSKSPP--A---EFMRMIGNDKQGQMI---VFHLIELLKNNGRL------PRPDGCPDEIYMIMTECWNNNV  304 (326)
T ss_dssp             HHHHHTTCGGGSHH--H---HHHHHHCTTCCTHHH---HHHHHHHHHTTCCC------CCCTTCCHHHHHHHHHHSCSSG
T ss_pred             HHHHhcCCCCCCCH--H---HHHHhhccccchhhh---HHHHHHHhhcCCCC------CCCCcccHHHHHHHHHHcCCCh
Confidence            99999998875321  1   112222222221111   00111111111110      1123578999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy7274         166 HKRIGVEDALA  176 (308)
Q Consensus       166 ~~R~t~~eil~  176 (308)
                      .+|||+.++++
T Consensus       305 ~~Rps~~el~~  315 (326)
T 2w1i_A          305 NQRPSFRDLAL  315 (326)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999874

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.87  E-value=1.1e-23  Score=185.16  Aligned_cols=130  Identities=13%  Similarity=0.137  Sum_probs=92.1

Q ss_pred             CCCCCCCCCcccCccccccCCCC--------------------CceEeccCCccccCCCCCCCCCccCcccccccchhhH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA--------------------DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEI   65 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~--------------------~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~   65 (308)
                      .||||||+|||++       .++                    .+||+|||+|+....        ...+||+.|+|||+
T Consensus       184 vHrDlKp~NILl~-------~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------~~~~gt~~y~aPE~  248 (336)
T 2vuw_A          184 EHRDLHWGNVLLK-------KTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------GIVVFCDVSMDEDL  248 (336)
T ss_dssp             BCSCCCGGGEEEE-------ECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET--------TEEECCCCTTCSGG
T ss_pred             eECCCCHHHEEEe-------ccCCcceeeeccCccccccCCCceEEEeeccccEecCC--------CcEEEeecccChhh
Confidence            6999999999998       554                    899999999997643        23489999999999


Q ss_pred             hhCCCCCCchhhHHHHHHH-HHHHhhCCCCCCCCCHHH-HHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCcc
Q psy7274          66 MLNSKGYTKSIDIWSVGCI-LAEMISNRPIFPGKHYLD-QLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWE  143 (308)
Q Consensus        66 l~~~~~~~~~~DiWSlG~i-l~ell~g~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (308)
                      +.+ . .+.++||||+|++ .+++++|..||.+..... ....+.......                        .....
T Consensus       249 ~~g-~-~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~  302 (336)
T 2vuw_A          249 FTG-D-GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK------------------------TKCNT  302 (336)
T ss_dssp             GCC-C-SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS------------------------SCCCS
T ss_pred             hcC-C-CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC------------------------cccch
Confidence            864 3 3899999998777 677888988884422111 111222111100                        00001


Q ss_pred             ccCCCCChhHHHHHHHhcccCCCCCCCHHHHh-cCCccc
Q psy7274         144 ILYPNADPNALDLLGKMLTFNPHKRIGVEDAL-AHPYLE  181 (308)
Q Consensus       144 ~~~~~~s~~~~~ll~~~L~~dP~~R~t~~eil-~hp~f~  181 (308)
                      ...+.+++++.+||.+||++|     ||+|+| +||||+
T Consensus       303 ~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          303 PAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            111235688999999999987     999999 999994

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.86  E-value=1.5e-23  Score=182.64  Aligned_cols=136  Identities=22%  Similarity=0.292  Sum_probs=95.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC------CCccCcccccccchhhHhhCCC--CCCchhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT------GFLTEYVATRWYRAPEIMLNSK--GYTKSID   77 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~--~~~~~~D   77 (308)
                      .||||||+|||++       .++.+||+|||+++.........      .......||..|+|||++.+..  .++.++|
T Consensus       156 vH~dlkp~NIl~~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~D  228 (317)
T 2buj_A          156 AHRDLKPTNILLG-------DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD  228 (317)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHH
T ss_pred             ccCCCCHHHEEEc-------CCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhh
Confidence            6999999999998       88999999999987653211000      0012346799999999875432  2688999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHH
Q psy7274          78 IWSVGCILAEMISNRPIFPGKHYL-DQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDL  156 (308)
Q Consensus        78 iWSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  156 (308)
                      |||+||++++|++|+.||.+.... ..+....                       ......      ...+..+..+.++
T Consensus       229 i~slG~il~el~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~~------~~~~~~~~~l~~l  279 (317)
T 2buj_A          229 VWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV-----------------------QNQLSI------PQSPRHSSALWQL  279 (317)
T ss_dssp             HHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-----------------------HCC--C------CCCTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCChhhhhcccchhhHHh-----------------------hccCCC------CccccCCHHHHHH
Confidence            999999999999999998431100 0000000                       000000      0013567899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcC
Q psy7274         157 LGKMLTFNPHKRIGVEDALAH  177 (308)
Q Consensus       157 l~~~L~~dP~~R~t~~eil~h  177 (308)
                      |.+||..||.+|||+++++++
T Consensus       280 i~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          280 LNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhhcChhhCCCHHHHHHH
Confidence            999999999999999999875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.82  E-value=1.1e-21  Score=188.04  Aligned_cols=123  Identities=19%  Similarity=0.247  Sum_probs=96.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       . +.+||+|||+++.....       +..+||+.|+|||++.+.  ++.++||||+||++
T Consensus       204 iHrDlkp~NIll~-------~-~~~kl~DFG~a~~~~~~-------~~~~gt~~y~aPE~~~~~--~~~~sDi~slG~~l  266 (681)
T 2pzi_A          204 VYNDLKPENIMLT-------E-EQLKLIDLGAVSRINSF-------GYLYGTPGFQAPEIVRTG--PTVATDIYTVGRTL  266 (681)
T ss_dssp             ECCCCSGGGEEEC-------S-SCEEECCCTTCEETTCC-------SCCCCCTTTSCTTHHHHC--SCHHHHHHHHHHHH
T ss_pred             eecccChHHeEEe-------C-CcEEEEecccchhcccC-------CccCCCccccCHHHHcCC--CCCceehhhhHHHH
Confidence            6999999999997       4 48999999999876432       345899999999998653  58999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|.++|.+....          +.+.....                           ...++.+.+||.+||..||
T Consensus       267 ~~l~~g~~~~~~~~~~----------~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dP  309 (681)
T 2pzi_A          267 AALTLDLPTRNGRYVD----------GLPEDDPV---------------------------LKTYDSYGRLLRRAIDPDP  309 (681)
T ss_dssp             HHHHSCCCEETTEECS----------SCCTTCHH---------------------------HHHCHHHHHHHHHHTCSSG
T ss_pred             HHHHhCCCCCcccccc----------cccccccc---------------------------cccCHHHHHHHhhhccCCh
Confidence            9999999888653210          00100000                           0124788999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|++..+++.|+|+..
T Consensus       310 ~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          310 RQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             GGSCSSHHHHHHHHHHH
T ss_pred             hhCCCHHHHHHHHHHHH
Confidence            99999999999998853

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.70  E-value=1.6e-17  Score=142.72  Aligned_cols=108  Identities=10%  Similarity=-0.060  Sum_probs=78.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+++|.                       ++        .++.++||||+||++
T Consensus       151 vH~Dikp~NIll~-------~~g~~kl~~~~~-----------------------~~--------~~~~~~Di~slG~il  192 (286)
T 3uqc_A          151 ALSIDHPSRVRVS-------IDGDVVLAYPAT-----------------------MP--------DANPQDDIRGIGASL  192 (286)
T ss_dssp             CCCCCSGGGEEEE-------TTSCEEECSCCC-----------------------CT--------TCCHHHHHHHHHHHH
T ss_pred             ccCCCCcccEEEc-------CCCCEEEEeccc-----------------------cC--------CCCchhHHHHHHHHH
Confidence            6999999999999       889999985432                       22        278999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+....+......                        ......+.....+.+++++.+||.+||..||
T Consensus       193 ~elltg~~Pf~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  248 (286)
T 3uqc_A          193 YALLVNRWPLPEAGVRSGLAPAERD------------------------TAGQPIEPADIDRDIPFQISAVAARSVQGDG  248 (286)
T ss_dssp             HHHHHSEECSCCCSBCCCSEECCBC------------------------TTSCBCCHHHHCTTSCHHHHHHHHHHHCTTS
T ss_pred             HHHHHCCCCCCcCCcchhhHHHHHH------------------------hccCCCChhhcccCCCHHHHHHHHHHcccCC
Confidence            9999999999876532111000000                        0001111223345678999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy7274         166 HKRIGVEDALA  176 (308)
Q Consensus       166 ~~R~t~~eil~  176 (308)
                      .+| |++++++
T Consensus       249 ~~R-s~~el~~  258 (286)
T 3uqc_A          249 GIR-SASTLLN  258 (286)
T ss_dssp             SCC-CHHHHHH
T ss_pred             ccC-CHHHHHH
Confidence            999 9999875

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.63  E-value=3.6e-18  Score=159.91  Aligned_cols=75  Identities=11%  Similarity=0.030  Sum_probs=47.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .+|.+||+|||+|+.......   ..++.+||+.|+|||++.+ . +..++|+||+|+++
T Consensus       361 IHRDIKPeNILL~-------~dg~vKL~DFGlAr~~~~~~~---~~~t~vGTp~YmAPE~l~g-~-~~~~~d~~s~g~~~  428 (569)
T 4azs_A          361 WHDDVRPWNVMVD-------ARQHARLIDFGSIVTTPQDCS---WPTNLVQSFFVFVNELFAE-N-KSWNGFWRSAPVHP  428 (569)
T ss_dssp             EESCCCGGGEEEC-------TTSCEEECCCTTEESCC---C---CSHHHHHHHHHHHHHHC-------------------
T ss_pred             eeccCchHhEEEC-------CCCCEEEeecccCeeCCCCCc---cccCceechhhccHHHhCC-C-CCCcccccccccch
Confidence            6999999999999       899999999999997754322   2466799999999999854 3 67889999999998


Q ss_pred             HHHhhCC
Q psy7274          86 AEMISNR   92 (308)
Q Consensus        86 ~ell~g~   92 (308)
                      +++.++.
T Consensus       429 ~~l~~~~  435 (569)
T 4azs_A          429 FNLPQPW  435 (569)
T ss_dssp             CCCCTTH
T ss_pred             hhhcccc
Confidence            8776553

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.07  E-value=5e-12  Score=117.67  Aligned_cols=81  Identities=22%  Similarity=0.362  Sum_probs=61.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCC-CCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiWS   80 (308)
                      .||||||+|||++       .  .+||+|||+|+.........    ......+||+.|+|||++.+. ..|+..+|+||
T Consensus       453 iHrDiKp~NILl~-------~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws  523 (540)
T 3en9_A          453 IHNDLTTSNFIFD-------K--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWE  523 (540)
T ss_dssp             ECTTCCTTSEEES-------S--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHH
T ss_pred             ccCCCCHHHEEEC-------C--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHH
Confidence            6999999999998       5  99999999999875421110    012356899999999998531 34788899999


Q ss_pred             HHHHHHHHhhCCCCC
Q psy7274          81 VGCILAEMISNRPIF   95 (308)
Q Consensus        81 lG~il~ell~g~~pf   95 (308)
                      .++-..+.+.++..|
T Consensus       524 ~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          524 IILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHhcccc
Confidence            998888877666544

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.28  E-value=1.1e-07  Score=81.00  Aligned_cols=38  Identities=18%  Similarity=0.010  Sum_probs=31.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhh
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML   67 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~   67 (308)
                      .||||||+|||++        ++.+||+|||+|+.                +..|.|||++.
T Consensus       215 iHrDlkp~NILl~--------~~~vkl~DFG~a~~----------------~~~~~a~e~l~  252 (282)
T 1zar_A          215 VHGDLSQYNVLVS--------EEGIWIIDFPQSVE----------------VGEEGWREILE  252 (282)
T ss_dssp             ECSCCSTTSEEEE--------TTEEEECCCTTCEE----------------TTSTTHHHHHH
T ss_pred             EeCCCCHHHEEEE--------CCcEEEEECCCCeE----------------CCCCCHHHHHH
Confidence            6999999999994        57899999999864                23468999864

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.87  E-value=4.6e-06  Score=69.87  Aligned_cols=27  Identities=19%  Similarity=0.134  Sum_probs=24.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      .||||||+|||++       .  .++|+|||+|...
T Consensus       193 vHrDlkp~NILl~-------~--~~~liDFG~a~~~  219 (258)
T 1zth_A          193 VHADLSEYNIMYI-------D--KVYFIDMGQAVTL  219 (258)
T ss_dssp             ECSSCSTTSEEES-------S--SEEECCCTTCEET
T ss_pred             EeCCCCHHHEEEc-------C--cEEEEECcccccC
Confidence            5999999999998       5  8999999999764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=96.87  E-value=0.00032  Score=62.31  Aligned_cols=68  Identities=18%  Similarity=0.318  Sum_probs=48.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCC----CCCCCCccccccCCCCHHHHHHHHHHH
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEP----VAEEPFRFSMELDDLPKETLKRLIFEE  297 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e  297 (308)
                      ...+.+.+.+||.+||.+|+++.+++.||||.+++.+....    ..+..|+|..++.....+.+.+++-+.
T Consensus       295 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (394)
T 4e7w_A          295 PPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLVPQH  366 (394)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSCCCCTTSSCCCCSCCCCHHHHHTCGGGHHHHSCGG
T ss_pred             CHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccccccCCCCCCCCCcCCCCHHHhhcCHHHHHhhccHh
Confidence            34678889999999999999999999999999998766542    233456665444444445555555433

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=96.77  E-value=0.00054  Score=60.15  Aligned_cols=34  Identities=32%  Similarity=0.463  Sum_probs=30.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ....+++.+||.+||.+|+|+++||+||||.++.
T Consensus       327 ~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          327 DEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            3567889999999999999999999999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.72  E-value=0.00011  Score=62.94  Aligned_cols=81  Identities=19%  Similarity=0.253  Sum_probs=47.4

Q ss_pred             CCCCCCCCCCcccCccccccCC--CCCceEeccCCccccCCCCCCCCCccCc--cccc---------ccch-hhHhhCCC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYD--PADEPICDFGLARVADPEHDHTGFLTEY--VATR---------WYRA-PEIMLNSK   70 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~--~~~~ki~DFGla~~~~~~~~~~~~~~~~--~gt~---------~y~a-PE~l~~~~   70 (308)
                      -+|+|++|.||+++       .  ...+.|+||+.+.......+........  .+..         .+.. |+....  
T Consensus       193 ~~HgD~~~~N~l~~-------~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r--  263 (304)
T 3sg8_A          193 LIHNDFSSDHILFD-------TEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK--  263 (304)
T ss_dssp             EECSCCCGGGEEEE-------TTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH--
T ss_pred             eEeCCCCcccEEEe-------CCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH--
Confidence            47999999999998       5  4557899999987654321100000000  0100         0011 222110  


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCC
Q psy7274          71 GYTKSIDIWSVGCILAEMISNRPIF   95 (308)
Q Consensus        71 ~~~~~~DiWSlG~il~ell~g~~pf   95 (308)
                       .....+.|++|.+++.+.+|..+|
T Consensus       264 -~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          264 -YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             -HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHcCCHHH
Confidence             122368999999999999997655

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.14  E-value=0.0011  Score=58.59  Aligned_cols=37  Identities=11%  Similarity=-0.106  Sum_probs=24.1

Q ss_pred             CCCCCCCCCCcccCccccccCCC---CCceEeccCCcccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDP---ADEPICDFGLARVA   41 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~---~~~ki~DFGla~~~   41 (308)
                      -.||||||.|||++......+..   ..+.|+||+-+...
T Consensus       226 IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          226 LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            36999999999998211110000   13789999987653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=96.06  E-value=0.0028  Score=56.70  Aligned_cols=40  Identities=23%  Similarity=0.394  Sum_probs=35.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE  269 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~  269 (308)
                      +..+.+++.+||.+||.+|+++.+++.||||.+++++..+
T Consensus       310 ~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~  349 (420)
T 1j1b_A          310 PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVK  349 (420)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTTCC
T ss_pred             CHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccccccc
Confidence            3467788899999999999999999999999999887654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=95.94  E-value=0.0013  Score=57.96  Aligned_cols=36  Identities=25%  Similarity=0.476  Sum_probs=32.3

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      +..+.+.+.+||.+||.+|+++.++++||||.++++
T Consensus       295 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          295 PSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence            345778889999999999999999999999998765

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=95.93  E-value=0.0075  Score=52.35  Aligned_cols=41  Identities=27%  Similarity=0.442  Sum_probs=36.1

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPV  271 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~  271 (308)
                      ..+.+++.+||..||.+|+++.++|.||||.+..++.....
T Consensus       289 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~~~  329 (360)
T 3e3p_A          289 KEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLP  329 (360)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTCCCT
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcCccccccCCccccCC
Confidence            46778889999999999999999999999999988876533

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=95.66  E-value=0.0054  Score=53.08  Aligned_cols=70  Identities=39%  Similarity=0.616  Sum_probs=57.4

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCCC----CCCCccccccCCCCHHHHHHHHHHHHh
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVA----EEPFRFSMELDDLPKETLKRLIFEETR  299 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~e~~  299 (308)
                      +..+.+.+.+||..||.+|+++.++++||||...+.+..++..    +..|+++.....++.++++++|++||.
T Consensus       279 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T 2b9h_A          279 NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF  352 (353)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSSCCCCCCCGGGGGGGCCSSCCCHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcccccccCCCCcceeeecchhhcCCHHHHHHHHHHHhh
Confidence            3466788899999999999999999999999999887765433    233566655667899999999999985

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=95.64  E-value=0.0033  Score=54.20  Aligned_cols=39  Identities=15%  Similarity=0.269  Sum_probs=34.1

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      .....+.+.+||..||.+|++++++++||||...+.+..
T Consensus       238 s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~~~~  276 (328)
T 3fe3_A          238 STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDE  276 (328)
T ss_dssp             CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCTTCC
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCcccc
Confidence            456788899999999999999999999999998766543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=95.52  E-value=0.0057  Score=53.81  Aligned_cols=33  Identities=24%  Similarity=0.415  Sum_probs=29.1

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      .+.+++.+||.+||.+|+|++++|+||||.+..
T Consensus       348 ~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          348 KFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             HHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence            567888999999999999999999999998754

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.50  E-value=0.0024  Score=52.69  Aligned_cols=29  Identities=14%  Similarity=0.087  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -.|+|++|.|||++       .++.+.|+|||.|..
T Consensus       186 l~HgDl~~~Nil~~-------~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVE-------NGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEE-------TTEEEEECCCTTCEE
T ss_pred             EECCCCCCCcEEEE-------CCcEEEEEcchhccc
Confidence            57999999999997       555567999998753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=95.46  E-value=0.011  Score=52.29  Aligned_cols=40  Identities=28%  Similarity=0.347  Sum_probs=34.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE  269 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~  269 (308)
                      ...+.+++.+||.+||.+|+|++++|.||||.+...|...
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~~~~  346 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSD  346 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCCCSS
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCCccc
Confidence            4467788999999999999999999999999987766543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=95.21  E-value=0.0049  Score=52.42  Aligned_cols=41  Identities=37%  Similarity=0.624  Sum_probs=33.0

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEP  270 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~  270 (308)
                      ...+.+.+.+||..||.+|++++++++||||..+.-|..+|
T Consensus       279 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~~~~  319 (320)
T 2i6l_A          279 SREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEP  319 (320)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-----
T ss_pred             hHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCccCCC
Confidence            34678889999999999999999999999999987776665

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=95.21  E-value=0.0085  Score=52.78  Aligned_cols=39  Identities=21%  Similarity=0.248  Sum_probs=32.1

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      ...+.+++.+||..||.+|++++++|+||||.+...+..
T Consensus       307 s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~  345 (389)
T 3gni_B          307 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS  345 (389)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---CC
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhcch
Confidence            346778889999999999999999999999999876543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=95.11  E-value=0.007  Score=50.92  Aligned_cols=34  Identities=35%  Similarity=0.627  Sum_probs=30.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ....+.+.+||..||.+|++++++++||||.++.
T Consensus       257 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          257 ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            4667889999999999999999999999999753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=95.01  E-value=0.01  Score=51.49  Aligned_cols=36  Identities=25%  Similarity=0.424  Sum_probs=31.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ..+.+++.+||..||.+|++++++|+||||.+...|
T Consensus       298 ~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p  333 (346)
T 4fih_A          298 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP  333 (346)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence            467888999999999999999999999999975443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=94.93  E-value=0.01  Score=50.67  Aligned_cols=39  Identities=28%  Similarity=0.532  Sum_probs=32.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      ...+.+.+.+||..||.+|+++.++++||||.++..+..
T Consensus       267 ~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  305 (317)
T 2pmi_A          267 DGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS  305 (317)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC---
T ss_pred             CHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchhh
Confidence            346778889999999999999999999999999876544

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=94.92  E-value=0.014  Score=49.91  Aligned_cols=39  Identities=23%  Similarity=0.376  Sum_probs=33.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE  269 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~  269 (308)
                      ..+.+.+.+||.+||.+|++++++|+||||.+.......
T Consensus       256 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~  294 (324)
T 3mtl_A          256 SDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHK  294 (324)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSS
T ss_pred             HHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccccc
Confidence            456788999999999999999999999999998765443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=94.91  E-value=0.012  Score=50.10  Aligned_cols=32  Identities=34%  Similarity=0.653  Sum_probs=29.4

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+||.+||.+|++++++++||||.++
T Consensus       276 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          276 EGIDLLSNMLCFDPNKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence            45678899999999999999999999999975

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=94.82  E-value=0.021  Score=49.82  Aligned_cols=69  Identities=16%  Similarity=0.187  Sum_probs=42.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC--CCCCCCCCccccccCCCCHHHHHHHHHHHHh
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD--EPVAEEPFRFSMELDDLPKETLKRLIFEETR  299 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  299 (308)
                      ...+.+.+.+||..||.+|+++.+++.||||.....+..  ++.....+... +....+.+.+++.+.++..
T Consensus       248 s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  318 (361)
T 3uc3_A          248 SPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEP-EQPMQSLDTIMQIISEATI  318 (361)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCCCC-------------------CCHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCchhhhccccccccccCC-cccccCHHHHHHHHhhccC
Confidence            346778899999999999999999999999976543321  11111222222 2234567778877776553

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=94.64  E-value=0.016  Score=51.87  Aligned_cols=34  Identities=24%  Similarity=0.376  Sum_probs=29.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+++.+||.+||.+|+|++++|+||||...
T Consensus       382 ~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          382 DPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             hHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence            3457788999999999999999999999999974

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=94.56  E-value=0.018  Score=48.49  Aligned_cols=36  Identities=36%  Similarity=0.668  Sum_probs=32.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ....+.+.+||..||.+|+++.+++.||||.+...|
T Consensus       258 ~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~~  293 (299)
T 2r3i_A          258 EDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  293 (299)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             HHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCCC
Confidence            466788899999999999999999999999987655

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=94.50  E-value=0.016  Score=49.01  Aligned_cols=38  Identities=26%  Similarity=0.369  Sum_probs=31.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      ..+.+.+.+||..||.+|+++++++.||||.+.+...+
T Consensus       259 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  296 (311)
T 4agu_A          259 YPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED  296 (311)
T ss_dssp             HHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC----
T ss_pred             HHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHHH
Confidence            35778889999999999999999999999999876543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=94.43  E-value=0.018  Score=49.75  Aligned_cols=37  Identities=27%  Similarity=0.397  Sum_probs=32.7

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      .+.+++.+||..||.+|++++++|+||||.....|..
T Consensus       287 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~  323 (351)
T 3mi9_A          287 YALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD  323 (351)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCC
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCccc
Confidence            4667889999999999999999999999998766654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=94.36  E-value=0.035  Score=48.24  Aligned_cols=37  Identities=24%  Similarity=0.433  Sum_probs=32.0

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA  267 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~  267 (308)
                      ..+.+++.+||..||.+|++++++++||||.+.....
T Consensus       308 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             HHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhhChhhhcccCcc
Confidence            3566788999999999999999999999999865543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=94.29  E-value=0.019  Score=51.20  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=32.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ...+.+++.+||..||.+|++++++|.||||.....|
T Consensus       374 s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p  410 (423)
T 4fie_A          374 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP  410 (423)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence            3467888999999999999999999999999975443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=94.28  E-value=0.033  Score=48.12  Aligned_cols=37  Identities=24%  Similarity=0.358  Sum_probs=32.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA  267 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~  267 (308)
                      ..+.+.+.+||..||.+|+++++++.||||.....|.
T Consensus       266 ~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~~  302 (346)
T 1ua2_A          266 DDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT  302 (346)
T ss_dssp             HHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCC
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCCC
Confidence            4678888999999999999999999999999876554

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=94.26  E-value=0.019  Score=48.07  Aligned_cols=33  Identities=33%  Similarity=0.504  Sum_probs=29.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ....+.+.+||..||.+|++++++++||||.+.
T Consensus       255 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          255 ESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            456788899999999999999999999999863

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=94.26  E-value=0.015  Score=49.25  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=28.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ..+.+++.+||..||.+|+|++++|.||||.+
T Consensus       257 ~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            35778899999999999999999999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=94.23  E-value=0.016  Score=49.62  Aligned_cols=35  Identities=20%  Similarity=0.359  Sum_probs=31.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+++.+||..||.+|++++++|+||||.+..
T Consensus       293 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          293 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            34677888999999999999999999999999754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=94.19  E-value=0.019  Score=49.85  Aligned_cols=72  Identities=31%  Similarity=0.454  Sum_probs=57.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFK  302 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  302 (308)
                      ...+.+.+.+||..||.+|+++.+++.||||..+.+|.+..... .-.+.++....+..++++++++|+..|+
T Consensus       290 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~  361 (362)
T 3pg1_A          290 DPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGL-SERFHFDESVTDVYDMHKIFTAEVERFN  361 (362)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGTTTC-CCCCCCCTTCCCHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCcccccccc-ccccChhhhhhhHHHHHHHHHHHHHHhc
Confidence            34577889999999999999999999999999998876543321 1233444456789999999999999986

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=94.08  E-value=0.026  Score=48.20  Aligned_cols=35  Identities=31%  Similarity=0.505  Sum_probs=31.1

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ..+.+.+.+||..||.+|+++.+++.||||..++.
T Consensus       303 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          303 ERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             HHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence            35668889999999999999999999999998754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=94.05  E-value=0.022  Score=53.11  Aligned_cols=39  Identities=26%  Similarity=0.487  Sum_probs=33.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE  269 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~  269 (308)
                      ..+.+++.+||..||.+|+++.++|+||||...+.|...
T Consensus       385 ~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~~~  423 (573)
T 3uto_A          385 EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD  423 (573)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTTTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCCCch
Confidence            356788899999999999999999999999987776543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=93.94  E-value=0.019  Score=48.47  Aligned_cols=36  Identities=17%  Similarity=0.290  Sum_probs=31.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+.+.+||..||.+|++++++++||||.+...
T Consensus       230 ~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          230 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence            346778889999999999999999999999997654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=93.94  E-value=0.012  Score=48.61  Aligned_cols=28  Identities=18%  Similarity=0.245  Sum_probs=22.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCcc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLAR   39 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~   39 (308)
                      -.|+|++|.|||++       ....+.|+||+.|.
T Consensus       185 l~HgDl~~~Nil~~-------~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          185 FSHGDLGDSNIFVK-------DGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSSCCTTSEEEE-------TTEEEEECCCTTCE
T ss_pred             EECCCCCcCcEEEE-------CCcEEEEEEchhcc
Confidence            46999999999997       54445799999765

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=93.82  E-value=0.027  Score=47.68  Aligned_cols=33  Identities=45%  Similarity=0.542  Sum_probs=27.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|+++.++|.||||...
T Consensus       271 ~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          271 ESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             HHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            456788899999999999999999999999874

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=93.82  E-value=0.022  Score=48.82  Aligned_cols=33  Identities=33%  Similarity=0.487  Sum_probs=29.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+++.+||..||.+|++++++|+||||...
T Consensus       293 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          293 DEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence            356678899999999999999999999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=93.78  E-value=0.016  Score=48.62  Aligned_cols=33  Identities=18%  Similarity=0.316  Sum_probs=29.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+.+.+.+||..||.+|+|++++++||||..
T Consensus       236 s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            346788899999999999999999999999974

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=93.60  E-value=0.02  Score=49.80  Aligned_cols=31  Identities=13%  Similarity=0.202  Sum_probs=25.0

Q ss_pred             cCCCCCCCCCCcccCccccccCCCC-C-ceEeccCCcccc
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPA-D-EPICDFGLARVA   41 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~-~-~ki~DFGla~~~   41 (308)
                      .-+|+|+++.|||++       .++ . +.|+||+.|...
T Consensus       217 ~lvHgD~~~~Nil~~-------~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          217 SIVHGDYRLDNLMFH-------PTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             EEECSSCSGGGEEEC-------SSSSCEEEECCCTTCEEE
T ss_pred             eEEeCCCCCCcEEEe-------CCCCcEEEEECccccccC
Confidence            347999999999998       444 3 589999998754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=93.46  E-value=0.03  Score=47.46  Aligned_cols=34  Identities=18%  Similarity=0.392  Sum_probs=28.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ..+.+.+.+||..||.+|+++.++++||||....
T Consensus       270 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          270 CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             HHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence            4577888999999999999999999999998753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=93.45  E-value=0.03  Score=49.07  Aligned_cols=31  Identities=29%  Similarity=0.465  Sum_probs=28.3

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      .+.+++.+||..||.+|+++.++|+||||.+
T Consensus       367 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          367 GFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            5668889999999999999999999999963

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=93.44  E-value=0.038  Score=47.52  Aligned_cols=33  Identities=30%  Similarity=0.527  Sum_probs=30.2

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      .+.+++.+||..||.+|+++.+++.||||....
T Consensus       309 ~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          309 QLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence            566888999999999999999999999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=93.41  E-value=0.029  Score=47.66  Aligned_cols=34  Identities=18%  Similarity=0.066  Sum_probs=28.3

Q ss_pred             HHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         233 WRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       233 ~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ..+++.+||..||.+|+++.++++||||.++.-|
T Consensus       256 ~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p  289 (299)
T 4g31_A          256 EYVMVQDMLSPSPMERPEAINIIENAVFEDLDFP  289 (299)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC---
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCC
Confidence            4567899999999999999999999999876444

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=93.10  E-value=0.033  Score=48.25  Aligned_cols=30  Identities=23%  Similarity=0.319  Sum_probs=27.5

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLE  261 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~  261 (308)
                      .+.+++.+||..||.+|+++.++|+||||.
T Consensus       331 ~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          331 LFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            456888999999999999999999999984

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=93.09  E-value=0.055  Score=45.49  Aligned_cols=40  Identities=20%  Similarity=0.357  Sum_probs=34.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE  269 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~  269 (308)
                      ...+.+.+.+||..||.+|++.++++.||||.....+...
T Consensus       237 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~~  276 (305)
T 2wtk_C          237 GPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEA  276 (305)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC-CC
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCCcCC
Confidence            4567888999999999999999999999999987665543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=93.09  E-value=0.042  Score=45.73  Aligned_cols=37  Identities=27%  Similarity=0.319  Sum_probs=32.4

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ...+.+.+.+||..||.+|+++++++.||||......
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (284)
T 3kk8_A          235 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV  271 (284)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence            3467888999999999999999999999999986543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=93.01  E-value=0.044  Score=45.79  Aligned_cols=33  Identities=21%  Similarity=0.305  Sum_probs=29.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+.+.+.+||..||.+|+++.+++.||||.+
T Consensus       252 ~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          252 TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            346778899999999999999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=92.58  E-value=0.072  Score=45.24  Aligned_cols=36  Identities=36%  Similarity=0.465  Sum_probs=32.0

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ..+.+.+.+||..||.+|+++.+++.||||.++...
T Consensus       271 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          271 ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence            456788899999999999999999999999987654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=92.47  E-value=0.055  Score=45.89  Aligned_cols=33  Identities=33%  Similarity=0.314  Sum_probs=29.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+.+.+.+||..||.+|++++++++||||.+
T Consensus       278 ~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          278 SSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            346778889999999999999999999999975

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=92.27  E-value=0.041  Score=47.13  Aligned_cols=29  Identities=14%  Similarity=0.130  Sum_probs=25.1

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -+|+|+++.|||++       .++.+.|+||+.+..
T Consensus       224 l~HgD~~~~Nil~~-------~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          224 LCHQDYGTGNTLLG-------ENEQIWVIDLDTVSF  252 (346)
T ss_dssp             EECSSCSTTSEEEC-------GGGCEEECCCTTCEE
T ss_pred             eecCCCCcccEEEe-------CCCcEEEEehhhccc
Confidence            47999999999997       567899999998753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=92.13  E-value=0.046  Score=46.95  Aligned_cols=35  Identities=29%  Similarity=0.409  Sum_probs=31.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ..+.+.+.+||..||.+|+++.++++||||.++.+
T Consensus       305 ~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          305 PLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            46778889999999999999999999999998755

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=92.12  E-value=0.16  Score=45.47  Aligned_cols=34  Identities=12%  Similarity=0.258  Sum_probs=31.0

Q ss_pred             cccHHHhhhhhcccCCCCcC-----ChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRI-----GVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~-----~~~~~l~~~~~~~~  263 (308)
                      ...+.+++.+||..||.+|+     +++++++||||..+
T Consensus       373 ~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            45678889999999999999     99999999999975

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=92.05  E-value=0.11  Score=42.87  Aligned_cols=35  Identities=20%  Similarity=0.456  Sum_probs=29.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+.+.+||..||.+|++.++++.||||....
T Consensus       236 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          236 SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             CHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            44678889999999999999999999999998743

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=91.92  E-value=0.094  Score=44.81  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=31.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ..+.+.+.+||..||.+|++.++++.||||.+....
T Consensus       245 ~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~  280 (325)
T 3kn6_A          245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL  280 (325)
T ss_dssp             HHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred             HHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccC
Confidence            457788899999999999999999999999875443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=91.88  E-value=0.044  Score=47.78  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=31.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      +..+.+.+.+||..||.+|+++.+++.||||.++.
T Consensus       326 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          326 PDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             CHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence            45788889999999999999999999999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=91.81  E-value=0.062  Score=45.00  Aligned_cols=35  Identities=34%  Similarity=0.595  Sum_probs=30.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ..+.+.+.+||..||.+|++..+++.||||.+...
T Consensus       258 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          258 DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence            35778889999999999999999999999987643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=91.74  E-value=0.082  Score=46.05  Aligned_cols=33  Identities=24%  Similarity=0.408  Sum_probs=29.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|+++++++.||||...
T Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            457788899999999999999999999999853

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=91.74  E-value=0.05  Score=48.46  Aligned_cols=30  Identities=7%  Similarity=0.051  Sum_probs=25.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD   42 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~   42 (308)
                      -.|+|++|.|||++       .++ ++|+||+.+....
T Consensus       234 liHGDl~~~Nil~~-------~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          234 LIHGDLHTGSVMVT-------QDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             EECSCCSGGGEEEC-------SSC-EEECCCTTCEEEC
T ss_pred             EEecCCCCCcEEEe-------CCC-CEEEeCcccccCc
Confidence            47999999999997       444 9999999987543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=91.70  E-value=0.078  Score=45.08  Aligned_cols=34  Identities=18%  Similarity=0.285  Sum_probs=29.8

Q ss_pred             cccHHHhhhhhcccCCCCcCCh-----hhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGV-----EGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~-----~~~l~~~~~~~~  263 (308)
                      .....+++.+||..||.+|+++     +++++||||...
T Consensus       250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            4467889999999999999984     799999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=91.64  E-value=0.065  Score=44.75  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=28.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ..+.+.+.+||..||.+|++.++++.||||.+
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            35788889999999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=91.63  E-value=0.063  Score=46.47  Aligned_cols=35  Identities=17%  Similarity=0.402  Sum_probs=31.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+.+.+||..||.+|+++++++.||||....
T Consensus       298 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          298 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence            34678889999999999999999999999999754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=91.62  E-value=0.081  Score=45.12  Aligned_cols=36  Identities=31%  Similarity=0.441  Sum_probs=31.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ..+.+.+.+||..||.+|+++.+++.||||.+...|
T Consensus       269 ~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~  304 (321)
T 2c30_A          269 PVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLP  304 (321)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCCG
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhccCCCc
Confidence            357788899999999999999999999999875433

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=91.60  E-value=0.062  Score=45.03  Aligned_cols=35  Identities=23%  Similarity=0.312  Sum_probs=28.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ..+.+.+.+||..||.+|++..+++.||||.....
T Consensus       262 ~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          262 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence            46788899999999999999999999999997654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=91.57  E-value=0.097  Score=44.04  Aligned_cols=33  Identities=21%  Similarity=0.315  Sum_probs=30.1

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|+++++++.||||...
T Consensus       244 ~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence            357788999999999999999999999999874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=91.48  E-value=0.1  Score=45.01  Aligned_cols=38  Identities=18%  Similarity=0.231  Sum_probs=32.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhh-------------hhcCcccccccCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEG-------------ALAHPYLEQYYDPA  267 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~-------------~l~~~~~~~~~~~~  267 (308)
                      ...+.+.+.+||..||.+|+|+.+             +|.|||+.+++.|.
T Consensus       283 s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~Pr  333 (336)
T 4g3f_A          283 APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEPR  333 (336)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCCC
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCCC
Confidence            456788899999999999999987             47899999987764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=91.48  E-value=0.08  Score=44.42  Aligned_cols=32  Identities=28%  Similarity=0.388  Sum_probs=29.1

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLE  261 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~  261 (308)
                      +..+.+.+.+||..||.+|++..+++.||||.
T Consensus       266 ~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          266 AEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             CHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            34678889999999999999999999999985

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=91.46  E-value=0.075  Score=45.40  Aligned_cols=36  Identities=28%  Similarity=0.293  Sum_probs=31.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+.+.+||..||.+|++++++|.||||.++..
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            346778889999999999999999999999988643

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=91.45  E-value=0.088  Score=44.89  Aligned_cols=33  Identities=33%  Similarity=0.552  Sum_probs=28.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhh------hcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGA------LAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~------l~~~~~~~~  263 (308)
                      ....+++.+||..||.+|++++++      ++||||..+
T Consensus       259 ~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          259 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             HHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence            467788999999999999999985      789999764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=91.42  E-value=0.092  Score=43.92  Aligned_cols=42  Identities=24%  Similarity=0.282  Sum_probs=36.0

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPV  271 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~  271 (308)
                      ...+.+.+.+||..||.+|++.++++.||||.+...|...|.
T Consensus       239 ~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~~~~~  280 (294)
T 2rku_A          239 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI  280 (294)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCCCG
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCCCCCc
Confidence            346778889999999999999999999999998777765543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=91.41  E-value=0.062  Score=45.65  Aligned_cols=32  Identities=16%  Similarity=0.129  Sum_probs=28.6

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+||..||.+|+++.++++||||.++
T Consensus       301 ~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          301 QEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             HHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             hHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence            45677899999999999999999999999863

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=91.36  E-value=0.1  Score=43.71  Aligned_cols=33  Identities=27%  Similarity=0.416  Sum_probs=30.0

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|++.++++.||||...
T Consensus       250 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          250 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence            357788899999999999999999999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=91.35  E-value=0.081  Score=43.99  Aligned_cols=38  Identities=18%  Similarity=0.463  Sum_probs=32.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA  267 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~  267 (308)
                      ...+.+.+.+||..||.+|++.++++.||||.......
T Consensus       236 ~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~  273 (284)
T 2vgo_A          236 SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRV  273 (284)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCC
T ss_pred             CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcccc
Confidence            34678889999999999999999999999999865433

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=91.34  E-value=0.072  Score=45.74  Aligned_cols=34  Identities=29%  Similarity=0.274  Sum_probs=30.4

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|++++++++||||.+.
T Consensus       296 ~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          296 SNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence            3467888899999999999999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=91.29  E-value=0.082  Score=43.79  Aligned_cols=34  Identities=18%  Similarity=0.201  Sum_probs=28.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|++..++++||||.+.
T Consensus       253 ~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          253 SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            4578888999999999999999999999999863

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=91.26  E-value=0.094  Score=43.27  Aligned_cols=33  Identities=18%  Similarity=0.163  Sum_probs=29.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|++.+++++||||...
T Consensus       236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          236 SAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence            466788899999999999999999999999875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=91.16  E-value=0.067  Score=44.38  Aligned_cols=36  Identities=22%  Similarity=0.373  Sum_probs=32.1

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+.+.+||..||.+|++..+++.||||.....
T Consensus       231 ~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          231 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            456788899999999999999999999999998653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=91.14  E-value=0.049  Score=45.48  Aligned_cols=36  Identities=31%  Similarity=0.552  Sum_probs=31.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      +..+.+.+.+||..||.+|+++.+++.||||.++..
T Consensus       250 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcccc
Confidence            346778889999999999999999999999998644

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=91.04  E-value=0.066  Score=44.34  Aligned_cols=36  Identities=22%  Similarity=0.288  Sum_probs=31.4

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+.+.+||..||.+|++..+++.||||.+...
T Consensus       235 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          235 SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence            346778889999999999999999999999987543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=90.97  E-value=0.055  Score=47.01  Aligned_cols=33  Identities=18%  Similarity=0.323  Sum_probs=29.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+.+++.+||..||.+|++++++|+||||..
T Consensus       250 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            346788899999999999999999999999975

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=90.88  E-value=0.067  Score=45.75  Aligned_cols=33  Identities=21%  Similarity=0.185  Sum_probs=29.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+.+.+.+||..||.+|+++.++|.||||..
T Consensus       280 ~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          280 SEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             hHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            346778889999999999999999999999986

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=90.83  E-value=0.055  Score=45.08  Aligned_cols=34  Identities=15%  Similarity=0.213  Sum_probs=30.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|+++.++++||||...
T Consensus       240 ~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            3467888899999999999999999999999874

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=90.83  E-value=0.096  Score=45.60  Aligned_cols=31  Identities=29%  Similarity=0.612  Sum_probs=28.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLE  261 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~  261 (308)
                      ..+.+.+.+||..||.+|+++.+++.||||.
T Consensus       334 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          334 STVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            4578889999999999999999999999996

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=90.82  E-value=0.17  Score=43.20  Aligned_cols=35  Identities=17%  Similarity=0.158  Sum_probs=30.5

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ....+.+.+||..||.+|++++++++||||.....
T Consensus       236 ~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          236 SAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence            35567889999999999999999999999987543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=90.80  E-value=0.1  Score=44.88  Aligned_cols=38  Identities=26%  Similarity=0.431  Sum_probs=31.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA  267 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~  267 (308)
                      ...+.+.+.+||..||.+|++..+++.||||.....|.
T Consensus       247 ~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~~~  284 (343)
T 3dbq_A          247 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV  284 (343)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC--
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHHhCccccccCCcc
Confidence            34678889999999999999999999999998755443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=90.76  E-value=0.11  Score=44.15  Aligned_cols=33  Identities=24%  Similarity=0.408  Sum_probs=29.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|++.++++.||||...
T Consensus       247 ~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             HHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence            457788899999999999999999999999864

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=90.70  E-value=0.099  Score=46.49  Aligned_cols=33  Identities=30%  Similarity=0.486  Sum_probs=29.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+.+.+.+||..||.+|+++++++.||||.+
T Consensus       373 ~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            346677889999999999999999999999975

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=90.64  E-value=0.1  Score=44.18  Aligned_cols=37  Identities=27%  Similarity=0.442  Sum_probs=31.0

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      +..+.+.+.+||..||.+|++..++++||||.....|
T Consensus       266 ~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~  302 (313)
T 3cek_A          266 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  302 (313)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred             hHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence            4467888999999999999999999999999875444

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=90.60  E-value=0.12  Score=44.65  Aligned_cols=36  Identities=25%  Similarity=0.471  Sum_probs=31.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+.+.+||..||.+|+++.+++.||||..+..
T Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~~  286 (342)
T 2qr7_A          251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ  286 (342)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGGG
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCccc
Confidence            346778899999999999999999999999987643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=90.48  E-value=0.074  Score=45.68  Aligned_cols=37  Identities=16%  Similarity=0.287  Sum_probs=32.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ...+.+.+.+||..||.+|+++++++.||||.+....
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  297 (336)
T 3fhr_A          261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVV  297 (336)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGS
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccC
Confidence            3467888999999999999999999999999985443

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=90.43  E-value=0.062  Score=45.92  Aligned_cols=34  Identities=24%  Similarity=0.387  Sum_probs=30.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+++.++|+||||.+.
T Consensus       231 s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            3467788899999999999999999999999874

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=90.36  E-value=0.16  Score=43.72  Aligned_cols=33  Identities=15%  Similarity=0.324  Sum_probs=30.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      .....+.+.+||..||.+|+++++++.||||..
T Consensus       232 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          232 SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence            456788899999999999999999999999986

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=90.29  E-value=0.098  Score=44.70  Aligned_cols=33  Identities=21%  Similarity=0.512  Sum_probs=29.6

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|+++.+++.||||...
T Consensus       246 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence            456788899999999999999999999999753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=90.22  E-value=0.095  Score=45.32  Aligned_cols=34  Identities=24%  Similarity=0.474  Sum_probs=30.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+++.+++.||||...
T Consensus       279 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          279 SLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            3467888999999999999999999999999863

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=90.10  E-value=0.13  Score=43.60  Aligned_cols=34  Identities=29%  Similarity=0.445  Sum_probs=30.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|++.++++.||||...
T Consensus       248 ~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             CHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            3467788899999999999999999999999754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=89.99  E-value=0.06  Score=47.12  Aligned_cols=35  Identities=29%  Similarity=0.342  Sum_probs=31.3

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+.+.+||..||.+|+++.++++||||.+..
T Consensus       316 ~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~  350 (373)
T 2x4f_A          316 SEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK  350 (373)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence            34677888999999999999999999999999764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=89.87  E-value=0.099  Score=45.23  Aligned_cols=33  Identities=39%  Similarity=0.600  Sum_probs=30.0

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|++..+++.||||.+.
T Consensus       261 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            467788899999999999999999999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=89.86  E-value=0.12  Score=46.50  Aligned_cols=34  Identities=35%  Similarity=0.542  Sum_probs=30.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+++.++|+||||...
T Consensus       241 s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          241 TPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            3467888999999999999999999999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=89.74  E-value=0.11  Score=47.18  Aligned_cols=35  Identities=31%  Similarity=0.564  Sum_probs=31.3

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ..+.+.+.+||..||.+|+++.++|.||||.....
T Consensus       251 ~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            35778889999999999999999999999998654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=89.64  E-value=0.15  Score=42.60  Aligned_cols=32  Identities=19%  Similarity=0.219  Sum_probs=29.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ..+.+.+.+||..||.+|+++.+++.||||..
T Consensus       258 ~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          258 KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             HHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            35678899999999999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=89.62  E-value=0.096  Score=43.26  Aligned_cols=34  Identities=24%  Similarity=0.245  Sum_probs=30.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|++..+++.||||.+.
T Consensus       235 ~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence            4467888999999999999999999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=89.59  E-value=0.16  Score=43.89  Aligned_cols=35  Identities=23%  Similarity=0.398  Sum_probs=30.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChh-hhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVE-GALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~-~~l~~~~~~~~~  264 (308)
                      .....+.+.+||..||.+|++.. +++.||||....
T Consensus       242 s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          242 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             CHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            45678889999999999999998 999999998763

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=89.55  E-value=0.17  Score=43.32  Aligned_cols=41  Identities=24%  Similarity=0.263  Sum_probs=35.0

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEP  270 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~  270 (308)
                      ...+.+.+.+||..||.+|++.++++.||||.....|...|
T Consensus       265 ~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~~~~  305 (335)
T 2owb_A          265 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP  305 (335)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccccCC
Confidence            34677888999999999999999999999999877665443

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=89.55  E-value=0.11  Score=47.34  Aligned_cols=36  Identities=25%  Similarity=0.339  Sum_probs=31.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+.+.+||..||.+|++++++|.||||.....
T Consensus       275 s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          275 SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            346778889999999999999999999999998654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=89.49  E-value=0.11  Score=44.03  Aligned_cols=30  Identities=27%  Similarity=0.306  Sum_probs=24.8

Q ss_pred             CCCCCCCCCcccCccccccCC---CCCc-eEeccCCccccC
Q psy7274           6 PHKRIGVEGALAHPYLEQYYD---PADE-PICDFGLARVAD   42 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~---~~~~-ki~DFGla~~~~   42 (308)
                      .|+|++|.|||++       .   ++.+ .|+||+.+....
T Consensus       193 ~HgD~~~~N~l~~-------~~~~~~~~~~~iD~~~a~~gd  226 (306)
T 3tdw_A          193 IHGDLSPDHFLTN-------LNSRQTPLTGIIDFGDAAISD  226 (306)
T ss_dssp             ECSCCSGGGEEEC-------TTCSSCCEEEECCCTTCEEEC
T ss_pred             EeCCCCcccEEEe-------cCCCCCceEEEEehhhcCCCC
Confidence            7999999999998       4   3565 799999987643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=89.47  E-value=0.14  Score=44.96  Aligned_cols=37  Identities=27%  Similarity=0.442  Sum_probs=31.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ...+.+++.+||..||.+|++..+++.||||.....+
T Consensus       294 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~  330 (390)
T 2zmd_A          294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  330 (390)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC--
T ss_pred             hHHHHHHHHHHcccChhhCCCHHHHhhCcCccccCcc
Confidence            4467888999999999999999999999999875544

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=89.12  E-value=0.077  Score=46.38  Aligned_cols=36  Identities=22%  Similarity=0.217  Sum_probs=32.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      +..+.+.+.+||..||.+|++..++++||||.++.+
T Consensus       333 ~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~  368 (377)
T 3byv_A          333 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT  368 (377)
T ss_dssp             CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence            457888899999999999999999999999988653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=89.10  E-value=0.11  Score=47.19  Aligned_cols=35  Identities=31%  Similarity=0.500  Sum_probs=31.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ..+.+.+.+||..+|.+|+++.++|.||||.....
T Consensus       256 ~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          256 ESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc
Confidence            35778889999999999999999999999998754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=89.10  E-value=0.14  Score=45.82  Aligned_cols=32  Identities=31%  Similarity=0.474  Sum_probs=28.6

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      .+.+.+.+||..||.+|++++++++||||...
T Consensus       259 ~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          259 IARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             HHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence            35678899999999999999999999999753

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=89.07  E-value=0.15  Score=43.36  Aligned_cols=37  Identities=19%  Similarity=0.277  Sum_probs=32.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      +..+.+.+.+||..||.+|++.+++++||||.+...+
T Consensus       267 ~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~  303 (320)
T 3a99_A          267 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP  303 (320)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence            4578888999999999999999999999999986543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=88.97  E-value=0.075  Score=44.12  Aligned_cols=36  Identities=14%  Similarity=0.341  Sum_probs=31.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      ..+.+.+.+||..||.+|++..+++.||||...+..
T Consensus       240 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence            457788899999999999999999999999987543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=88.93  E-value=0.23  Score=41.30  Aligned_cols=35  Identities=17%  Similarity=0.128  Sum_probs=30.2

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+.+.+||..||.+|++.++++.||||....
T Consensus       252 ~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          252 SAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             CHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            44677888999999999999999999999998754

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=88.89  E-value=0.13  Score=43.26  Aligned_cols=34  Identities=26%  Similarity=0.429  Sum_probs=30.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|++.++++.||||...
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          235 SESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            4567888999999999999999999999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=88.83  E-value=0.12  Score=46.99  Aligned_cols=33  Identities=27%  Similarity=0.568  Sum_probs=30.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|+++.++|.||||.+.
T Consensus       266 ~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          266 EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            457788899999999999999999999999875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=88.65  E-value=0.13  Score=43.47  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=31.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      +..+.+.+.+||..||.+|++.++++.||||..+.
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence            44678889999999999999999999999998764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=88.53  E-value=0.17  Score=43.35  Aligned_cols=34  Identities=18%  Similarity=0.225  Sum_probs=30.8

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+++++++.||||.+.
T Consensus       248 ~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          248 SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            4478888999999999999999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=88.49  E-value=0.16  Score=44.61  Aligned_cols=35  Identities=29%  Similarity=0.418  Sum_probs=31.1

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+.+.+||..||.+|+++.+++.||||....
T Consensus       278 s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            34678889999999999999999999999998743

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=88.42  E-value=0.13  Score=43.73  Aligned_cols=34  Identities=18%  Similarity=0.309  Sum_probs=30.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|++..+++.||||.+.
T Consensus       260 ~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            4477888999999999999999999999999863

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=88.42  E-value=0.48  Score=41.79  Aligned_cols=34  Identities=21%  Similarity=0.400  Sum_probs=29.9

Q ss_pred             cccHHHhhhhhcccCCCCcCCh------hhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGV------EGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~------~~~l~~~~~~~~  263 (308)
                      .....+++.+||..||.+|+++      ++++.||||...
T Consensus       286 s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          286 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            4467888999999999999985      799999999875

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=88.40  E-value=0.11  Score=42.92  Aligned_cols=29  Identities=10%  Similarity=0.118  Sum_probs=23.7

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -.|+|+.+.|||++       ..+.+-|+||+.|..
T Consensus       195 l~HGDl~~~Nil~~-------~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFD-------EGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEE-------TTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEE-------CCeEEEEEECccccc
Confidence            36999999999998       555567999998753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=88.18  E-value=0.17  Score=42.66  Aligned_cols=33  Identities=18%  Similarity=0.344  Sum_probs=30.1

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|++..+++.||||...
T Consensus       253 ~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          253 DNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence            467788899999999999999999999999874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=87.86  E-value=0.18  Score=44.54  Aligned_cols=36  Identities=17%  Similarity=0.290  Sum_probs=31.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+++.+||..||.+|+++.+++.||||.+...
T Consensus       295 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  330 (400)
T 1nxk_A          295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  330 (400)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCC
Confidence            346788899999999999999999999999987543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=87.80  E-value=0.28  Score=41.31  Aligned_cols=36  Identities=17%  Similarity=0.213  Sum_probs=30.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      ...+.+.+.+||..||.+|++.++++.||||.....
T Consensus       257 ~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            456788899999999999999999999999997543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=87.75  E-value=0.29  Score=42.16  Aligned_cols=34  Identities=21%  Similarity=0.400  Sum_probs=29.9

Q ss_pred             cccHHHhhhhhcccCCCCcCCh------hhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGV------EGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~------~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+++      ++++.||||...
T Consensus       243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            4467888999999999999995      799999999865

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=87.60  E-value=0.14  Score=44.55  Aligned_cols=33  Identities=30%  Similarity=0.404  Sum_probs=29.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||..||.+|+++.++|.||||...
T Consensus       259 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          259 PEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence            467788899999999999999999999999864

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=87.46  E-value=0.11  Score=44.10  Aligned_cols=29  Identities=14%  Similarity=0.014  Sum_probs=23.2

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -+|+|+.+.|||++       .++.+.|+||+.+..
T Consensus       189 liHgDl~~~Nil~~-------~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          189 VIHADLFQDNVFFL-------GDELSGLIDFYFACN  217 (322)
T ss_dssp             EECSCCCGGGEEEE-------TTEEEEECCCTTCEE
T ss_pred             cCCCCCCccCEEEe-------CCceEEEecchhccC
Confidence            37999999999997       544457999997753

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=87.24  E-value=0.2  Score=47.49  Aligned_cols=67  Identities=12%  Similarity=0.072  Sum_probs=44.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCC-------CCCCCCccccccCCCCHHHHHHHHHHHH
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEP-------VAEEPFRFSMELDDLPKETLKRLIFEET  298 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~e~  298 (308)
                      ..+.+.+.+||.+||.+|+++.+++.||||..+.+.-...       .......+... .+.+...++++|.++.
T Consensus       272 ~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~kil~~f~~~~~~~~~~~i~-~~~tl~~l~~~i~~~T  345 (676)
T 3qa8_A          272 GKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLLSVMNMVSGRVHTYPVT-ENENLQNLKSWLQQDT  345 (676)
T ss_dssp             HHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCCEEECCCSSSSCCCEEECC-TTCCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhccccccccccccccceeecC-CCccHHHHHHHHHHHh
Confidence            3567788999999999999999999999999876432211       11122233322 4568899999988754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=87.16  E-value=0.26  Score=42.64  Aligned_cols=34  Identities=21%  Similarity=0.375  Sum_probs=30.3

Q ss_pred             cccHHHhhhhhcccCCCCcCCh------hhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGV------EGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~------~~~l~~~~~~~~  263 (308)
                      .....+.+.+||..||.+|++.      ++++.||||..+
T Consensus       248 ~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          248 HEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            4467888999999999999998      889999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=87.16  E-value=0.42  Score=43.30  Aligned_cols=34  Identities=24%  Similarity=0.261  Sum_probs=30.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|++..+++.||||...
T Consensus       240 s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          240 NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            3467888999999999999999999999999864

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=86.99  E-value=0.18  Score=43.17  Aligned_cols=31  Identities=19%  Similarity=0.179  Sum_probs=25.3

Q ss_pred             CCCCCCCCCCcccCccccccCCC----CCceEeccCCccccC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDP----ADEPICDFGLARVAD   42 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~----~~~ki~DFGla~~~~   42 (308)
                      -+|+|+.+.|||++       .+    +.+.|+||+.+....
T Consensus       185 lvHgD~~~~Nil~~-------~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          185 FVHRDFHAQNLLWL-------PEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             EECSCCSGGGEEEC-------TTSCGGGGEEECCCTTCEEEC
T ss_pred             eEeCCcCcccEEec-------cCcCCCCCeEEEeCCCcCcCC
Confidence            46999999999997       42    568999999987543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=86.75  E-value=0.38  Score=41.29  Aligned_cols=34  Identities=12%  Similarity=0.273  Sum_probs=30.4

Q ss_pred             cccHHHhhhhhcccCCCCcC-----ChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRI-----GVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~-----~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+     ++++++.||||...
T Consensus       229 s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          229 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            45678889999999999999     89999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=86.58  E-value=0.4  Score=40.74  Aligned_cols=34  Identities=15%  Similarity=0.392  Sum_probs=30.3

Q ss_pred             cccHHHhhhhhcccCCCCcC-----ChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRI-----GVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~-----~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+     ++++++.||||...
T Consensus       227 ~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          227 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            34678889999999999999     89999999999864

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=86.40  E-value=0.24  Score=42.19  Aligned_cols=28  Identities=21%  Similarity=0.134  Sum_probs=23.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      -+|+|+++.|||++       .  .+.|+||+.+...
T Consensus       197 l~HgD~~~~Nil~~-------~--~~~lIDfe~a~~g  224 (328)
T 1zyl_A          197 RLHGDCHAGNILWR-------D--GPMFVDLDDARNG  224 (328)
T ss_dssp             ECCSSCSGGGEEES-------S--SEEECCCTTCCEE
T ss_pred             eeeCCCCcccEeEc-------C--CCEEEECCCCCcC
Confidence            37999999999996       3  6899999987643

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=86.27  E-value=0.31  Score=41.51  Aligned_cols=34  Identities=24%  Similarity=0.346  Sum_probs=30.2

Q ss_pred             cccHHHhhhhhcccCCCCcC-----ChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRI-----GVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~-----~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+     ++++++.||||...
T Consensus       245 ~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          245 TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            44678889999999999999     78899999999865

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=86.21  E-value=0.15  Score=43.41  Aligned_cols=35  Identities=23%  Similarity=0.239  Sum_probs=31.4

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+.+.+||..||.+|++..+++.||||....
T Consensus       259 ~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          259 SPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            34678889999999999999999999999998764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=86.05  E-value=0.14  Score=44.31  Aligned_cols=29  Identities=14%  Similarity=0.092  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -+|+|+.+.|||++       ....+.|+||+.|..
T Consensus       224 l~HgDl~~~Nil~~-------~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          224 LLWGDARVGNVLYR-------DFQPVAVLDWEMVAL  252 (357)
T ss_dssp             EECSSCSGGGEEEE-------TTEEEEECCGGGCEE
T ss_pred             EEeCCCCCCeEEEe-------CCcEEEEEccccccc
Confidence            47999999999997       544578999998764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=85.82  E-value=0.28  Score=43.79  Aligned_cols=30  Identities=23%  Similarity=0.270  Sum_probs=27.9

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLE  261 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~  261 (308)
                      .+.+.+.+||..||.+|+++.+++.||||.
T Consensus       271 ~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          271 EATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence            567888999999999999999999999995

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=85.25  E-value=0.38  Score=42.50  Aligned_cols=28  Identities=39%  Similarity=0.666  Sum_probs=25.9

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPY  259 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~  259 (308)
                      .+.+++.+||.+||.+|+|++++|+|||
T Consensus       320 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  347 (398)
T 4b99_A          320 QALSLLGRMLRFEPSARISAAAALRHPF  347 (398)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence            5667889999999999999999999998

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=85.22  E-value=0.51  Score=38.80  Aligned_cols=37  Identities=22%  Similarity=0.198  Sum_probs=32.3

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      +..+.+.+.+||..||.+|++.++++.|+++.+...+
T Consensus       241 ~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~  277 (279)
T 2w5a_A          241 SDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHH  277 (279)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGSC
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhccc
Confidence            4567888999999999999999999999999886543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=85.20  E-value=0.26  Score=42.82  Aligned_cols=28  Identities=11%  Similarity=0.128  Sum_probs=22.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -+|+|+.+.|||++       . +.+.|+||..|..
T Consensus       214 l~HgDl~~~Nil~~-------~-~~~~lID~e~a~~  241 (369)
T 3c5i_A          214 FCHNDLQENNIINT-------N-KCLRLIDFEYSGF  241 (369)
T ss_dssp             EECSCCCGGGEEEC-------C--CEEECCCTTCEE
T ss_pred             EEeCCCCcccEEec-------C-CcEEEEEecCCCC
Confidence            47999999999996       3 4489999998763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=84.73  E-value=0.43  Score=41.18  Aligned_cols=35  Identities=17%  Similarity=0.355  Sum_probs=30.8

Q ss_pred             cccHHHhhhhhcccCCCCcC-----ChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRI-----GVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~-----~~~~~l~~~~~~~~~  264 (308)
                      ...+.+++.+||..||.+|+     +++++++||||....
T Consensus       290 ~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence            34677888999999999999     999999999998753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=84.44  E-value=0.27  Score=43.92  Aligned_cols=14  Identities=14%  Similarity=0.019  Sum_probs=12.9

Q ss_pred             CCCCCCCCCCcccC
Q psy7274           5 NPHKRIGVEGALAH   18 (308)
Q Consensus         5 ~~HrDlKp~Nili~   18 (308)
                      -+|+|+.+.|||++
T Consensus       251 ~~H~Dl~~gNiL~~  264 (429)
T 1nw1_A          251 FCHNDLQEGNILLP  264 (429)
T ss_dssp             EECSCCCGGGEEEE
T ss_pred             EEeCCCCCCeEEee
Confidence            47999999999998

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=84.26  E-value=0.59  Score=40.30  Aligned_cols=34  Identities=18%  Similarity=0.320  Sum_probs=30.4

Q ss_pred             cccHHHhhhhhcccCCCCcCC-----hhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIG-----VEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~-----~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|++     +++++.||||...
T Consensus       262 ~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            457788899999999999998     9999999999864

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=84.09  E-value=0.39  Score=41.39  Aligned_cols=34  Identities=21%  Similarity=0.162  Sum_probs=30.3

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|++.++++.|||+...
T Consensus       279 ~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence            3467788899999999999999999999999763

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=83.67  E-value=0.35  Score=40.65  Aligned_cols=29  Identities=17%  Similarity=0.024  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      -+|+|+.+.||+.        .++.+.|+||..|...
T Consensus       175 l~HgDl~~~Nil~--------~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          175 ACHCDPLCENFLD--------TGERMWIVDWEYSGMN  203 (301)
T ss_dssp             EECSCCCGGGEEE--------CSSCEEECCCTTCEEE
T ss_pred             eeccCCCcCCEEE--------CCCCEEEEecccccCC
Confidence            4799999999994        5678899999988754

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=83.65  E-value=0.29  Score=42.10  Aligned_cols=32  Identities=19%  Similarity=0.126  Sum_probs=26.9

Q ss_pred             cCCCCCCCCCCcccCccccccCCCCCceEeccCCccccC
Q psy7274           4 FNPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD   42 (308)
Q Consensus         4 ~~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~   42 (308)
                      .-+|+|+.+.||+++       .++.+.|+||+.+....
T Consensus       207 ~~~HgD~~~~N~l~~-------~~~~~~~iD~e~~~~~~  238 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVG-------NEESIYIIDWDEPMLAP  238 (339)
T ss_dssp             EEECSCCCGGGEEEC-------GGGCEEECCCSSCEEEC
T ss_pred             eeEeCCCCcCCEEEe-------CCCeEEEEECCCCeeCC
Confidence            357999999999998       66789999999887543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=82.77  E-value=0.39  Score=40.14  Aligned_cols=34  Identities=18%  Similarity=0.148  Sum_probs=30.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      +..+.+.+.+||..||.+|++..+++.||||...
T Consensus       244 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            3467888999999999999999999999999864

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=82.65  E-value=0.43  Score=41.86  Aligned_cols=29  Identities=14%  Similarity=0.117  Sum_probs=23.8

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCcccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVA   41 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~   41 (308)
                      -.|+|+.+.|||++       . +.++|+||..+...
T Consensus       229 L~HGDl~~~Nil~~-------~-~~~~lID~e~a~~G  257 (397)
T 2olc_A          229 LIHGDLHTGSIFAS-------E-HETKVIDPEFAFYG  257 (397)
T ss_dssp             EECSCCSGGGEEEC-------S-SCEEECCCTTCEEE
T ss_pred             eeeCCCCcCcEEEe-------C-CCeEEEeCcccccC
Confidence            47999999999997       3 35899999887644

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=82.62  E-value=0.59  Score=44.22  Aligned_cols=34  Identities=15%  Similarity=0.320  Sum_probs=30.3

Q ss_pred             cccHHHhhhhhcccCCCCcCC-----hhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIG-----VEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~-----~~~~l~~~~~~~~  263 (308)
                      .....+++.+||..||.+|++     +++++.||||..+
T Consensus       418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            346788899999999999998     6999999999875

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=82.44  E-value=0.3  Score=43.24  Aligned_cols=35  Identities=23%  Similarity=0.223  Sum_probs=31.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      +..+.+++.+||..||.+|++..+++.||||.++.
T Consensus       337 ~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          337 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  371 (413)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHH
Confidence            45788889999999999999999999999998763

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=80.53  E-value=0.68  Score=40.36  Aligned_cols=31  Identities=39%  Similarity=0.637  Sum_probs=28.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ...+.+++.+||.+||.+|++++++|+||||
T Consensus       302 ~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~  332 (388)
T 3oz6_A          302 NEEALDLLDKLLQFNPNKRISANDALKHPFV  332 (388)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSTTT
T ss_pred             CHHHHHHHHHhhccCcccCCCHHHHhCCHHH
Confidence            4567888999999999999999999999998

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=80.30  E-value=0.71  Score=41.03  Aligned_cols=31  Identities=45%  Similarity=0.664  Sum_probs=28.3

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ...+.+++.+||.+||.+|++++++|+||||
T Consensus       335 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  365 (432)
T 3n9x_A          335 SDDGINLLESMLKFNPNKRITIDQALDHPYL  365 (432)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTCGGG
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcChhh
Confidence            3467788899999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	308
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-48
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-38
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-14
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-38
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-37
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-36
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-11
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-35
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-33
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-33
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.002
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-32
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-29
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-29
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-28
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-28
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-24
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-24
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-04
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	0.002
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-24
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-04
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-24
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.001
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.003
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-23
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-23
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-23
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-23
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-23
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	0.004
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-21
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-20
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.001
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-20
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-20
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.002
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-20
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-17
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-16
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-14
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-14
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-12
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-11
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-11
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-11
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-06

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 6e-48
 Identities = 140/161 (86%), Positives = 149/161 (92%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           ICDFGLARVADP+HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM+SN
Sbjct: 150 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 209

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           RPIFPGKHYLDQLNHILGILGSP+ EDL+CIIN KAR+YL SLP K KVPW  L+PNAD 
Sbjct: 210 RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS 269

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
            ALDLL KMLTFNPHKRI VE ALAHPYLEQYYDP+DEP++
Sbjct: 270 KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIA 310

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 2e-19
 Identities = 51/66 (77%), Positives = 55/66 (83%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML FNPHKRI VE ALAHPYLEQYYDP+DEP+AE PF+F MELDDLPKE LK LIFEET
Sbjct: 277 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEET 336

Query: 299 RVFKQE 304
             F+  
Sbjct: 337 ARFQPG 342

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 3e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML FNPHKRI VE ALAHPYLEQYYDP+DEPI +
Sbjct: 278 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAE 311

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 6e-38
 Identities = 83/160 (51%), Positives = 108/160 (67%), Gaps = 6/160 (3%)

Query: 33  CDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
            DFGLAR  D E       T YVATRWYRAPEIMLN   Y +++DIWSVGCI+AE+++ R
Sbjct: 163 LDFGLARHTDDEM------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN 152
            +FPG  ++DQL  IL ++G+P  E L  I +E AR+Y+QSL   PK+ +  ++  A+P 
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 276

Query: 153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
           A+DLL KML  +  KRI    ALAH Y  QY+DP DEPV+
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 4e-14
 Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+ +  KRI    ALAH Y  QY+DP DEPVA +P+  S E  DL  +  K L ++E 
Sbjct: 283 KMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEV 341

Query: 299 RVF 301
             F
Sbjct: 342 ISF 344

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 1e-06
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPICD 34
           ML+ +  KRI    ALAH Y  QY+DP DEP+ D
Sbjct: 284 MLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 6e-38
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 32  ICDFGLARVADP-EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR     ++      T  V T WYR PE++L  + Y   ID+W  GCI+AEM +
Sbjct: 158 LADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 217

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP-NA 149
             PI  G     QL  I  + GS TPE    + N +    L+ +  + +   + L     
Sbjct: 218 RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVR 277

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
           DP ALDL+ K+L  +P +RI  +DAL H +      P+D
Sbjct: 278 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 316

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPAD 268
           K+L+ +P +RI  + AL H +      P+D
Sbjct: 287 KLLVLDPAQRIDSDDALNHDFFWSDPMPSD 316

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 7e-04
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPAD 29
           +L+ +P +RI  + AL H +      P+D
Sbjct: 288 LLVLDPAQRIDSDDALNHDFFWSDPMPSD 316

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 7e-37
 Identities = 54/159 (33%), Positives = 76/159 (47%), Gaps = 6/159 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLA+     +      T  V TRWYRAPE++  ++ Y   +D+W+VGCILAE++  
Sbjct: 141 LADFGLAKSFGSPNRAY---THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P  PG   LDQL  I   LG+PT E    + +       +S    P +P   ++  A  
Sbjct: 198 VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF---PGIPLHHIFSAAGD 254

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
           + LDL+  +  FNP  RI    AL   Y      P    
Sbjct: 255 DLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 293

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 11/32 (34%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEP 270
            + +FNP  RI    AL   Y      P    
Sbjct: 262 GLFLFNPCARITATQALKMKYFSNRPGPTPGC 293

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 11/31 (35%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
           + +FNP  RI    AL   Y      P    
Sbjct: 263 LFLFNPCARITATQALKMKYFSNRPGPTPGC 293

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (326), Expect = 8e-36
 Identities = 72/159 (45%), Positives = 104/159 (65%), Gaps = 6/159 (3%)

Query: 33  CDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
            DFGLAR AD E      +T YV TRWYRAPE++LN   YT+++DIWSVGCI+AEMI+ +
Sbjct: 163 LDFGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 216

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN 152
            +F G  +LDQL  I+ + G+P  E +  + +++A++Y++ LP   K  +  +  NA P 
Sbjct: 217 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL 276

Query: 153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
           A++LL KML  +  +R+   +ALAHPY E  +D  DEP 
Sbjct: 277 AVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQ 315

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 2e-11
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEET 298
           KML+ +  +R+    ALAHPY E  +D  DEP   + +  S +  D   +  KR+ ++E 
Sbjct: 283 KMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQV-QKYDDSFDDVDRTLDEWKRVTYKEV 341

Query: 299 RVFK 302
             FK
Sbjct: 342 LSFK 345

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPIC 33
           ML+ +  +R+    ALAHPY E  +D  DEP  
Sbjct: 284 MLVLDAEQRVTAGEALAHPYFESLHDTEDEPQV 316

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 5e-35
 Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 8/165 (4%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG A+       +      Y+ +R+YRAPE++  +  YT SID+WS GC+LAE++  
Sbjct: 164 LCDFGSAKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW-EILYPNAD 150
           +PIFPG   +DQL  I+ +LG+PT E    I            P     PW ++  P   
Sbjct: 220 QPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNYTEFKFPQIKAHPWTKVFRPRTP 276

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRE 195
           P A+ L  ++L + P  R+   +A AH + ++  DP  +  + R+
Sbjct: 277 PEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 321

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEP----FRFSMELDDLPKETLKRLI 294
           ++L + P  R+    A AH + ++  DP  +          F F+ +           LI
Sbjct: 285 RLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILI 344

Query: 295 FEETRV 300
               R+
Sbjct: 345 PPHARI 350

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
           +L + P  R+    A AH + ++  DP  + 
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDELRDPNVKL 316

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  122 bits (307), Expect = 1e-33
 Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 5/151 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR            T  + T WYRAP++++ SK Y+ +IDIWSVGCI AEM++ 
Sbjct: 141 IADFGLARAFGIPVRKY---THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P+FPG    DQL  I  ILG+P  ++   +   +   Y  +      +PWE      D 
Sbjct: 198 TPLFPGVSEADQLMRIFRILGTPNSKNWPNVT--ELPKYDPNFTVYEPLPWESFLKGLDE 255

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
           + +DLL KML  +P++RI  + AL H Y ++
Sbjct: 256 SGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 4e-33
 Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 5/155 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR            T  V T WYRAPEI+L  K Y+ ++DIWS+GCI AEM++ 
Sbjct: 143 LADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           R +FPG   +DQL  I   LG+P               Y  S P   +  +  + P  D 
Sbjct: 200 RALFPGDSEIDQLFRIFRTLGTPDEVVWPG--VTSMPDYKPSFPKWARQDFSKVVPPLDE 257

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
           +   LL +ML ++P+KRI  + ALAHP+ +    P
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDP 266
           +ML ++P+KRI  + ALAHP+ +    P
Sbjct: 265 QMLHYDPNKRISAKAALAHPFFQDVTKP 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDP 27
           ML ++P+KRI  + ALAHP+ +    P
Sbjct: 266 MLHYDPNKRISAKAALAHPFFQDVTKP 292

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 3e-32
 Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 6/156 (3%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + +FGLAR            +  V T WYR P+++  +K Y+ SID+WS GCI AE+ + 
Sbjct: 142 LANFGLARAFGIPVRCY---SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            RP+FPG    DQL  I  +LG+PT E    +   K   Y     +        + P  +
Sbjct: 199 GRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT--KLPDYKPYPMYPATTSLVNVVPKLN 256

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
               DLL  +L  NP +RI  E+AL HPY   +  P
Sbjct: 257 ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDP 266
            +L  NP +RI  E AL HPY   +  P
Sbjct: 265 NLLKCNPVQRISAEEALQHPYFSDFCPP 292

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDP 27
           +L  NP +RI  E AL HPY   +  P
Sbjct: 266 LLKCNPVQRISAEEALQHPYFSDFCPP 292

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 1e-29
 Identities = 61/149 (40%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 33  CDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISNR 92
            DFGLAR+   +   T      V T WYRAPE +L    Y   +D+WSVGCI AEM   +
Sbjct: 158 ADFGLARIYSFQMALTS----VVVTLWYRAPE-VLLQSSYATPVDLWSVGCIFAEMFRRK 212

Query: 93  PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPN 152
           P+F G   +DQL  IL ++G P  ED             Q+   K   P E    + D  
Sbjct: 213 PLFRGSSDVDQLGKILDVIGLPGEED----WPRDVALPRQAFHSKSAQPIEKFVTDIDEL 268

Query: 153 ALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
             DLL K LTFNP KRI    AL+HPY +
Sbjct: 269 GKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 3e-29
 Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 18/185 (9%)

Query: 19  PYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 78
           P            I DFGLAR        +  +T YV TR+YRAPE++L   GY +++DI
Sbjct: 147 PSNIVVKSDCTLKILDFGLART----AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDI 201

Query: 79  WSVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKP 138
           WSVGCI+ EM+ ++ +FPG+ Y+DQ N ++  LG+P PE +  +     R+Y+++ P   
Sbjct: 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL-QPTVRNYVENRPKYA 260

Query: 139 KVPWEILYPNA------------DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDP 186
            + +  L+P++               A DLL KML  +P KRI V+DAL HPY+  +YDP
Sbjct: 261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320

Query: 187 ADEPV 191
           A+   
Sbjct: 321 AEVEA 325

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 1e-10
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPV-AEEPFRFSMELDDLPKETLKRLIFEE 297
           KML+ +P KRI V+ AL HPY+  +YDPA+      + +   ++  +   E  K LI++E
Sbjct: 293 KMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 352

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPIC 33
           ML+ +P KRI V+ AL HPY+  +YDPA+    
Sbjct: 294 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 326

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  109 bits (274), Expect = 1e-28
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 11/155 (7%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + D+GLA    P  ++       VA+R+++ PE++++ + Y  S+D+WS+GC+LA MI  
Sbjct: 171 LIDWGLAEFYHPGQEYN----VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 226

Query: 92  R-PIFPGKHYLDQLNHILGILGSPTPEDLSCIIN-EKARSYLQSLPFKPKVPWEILYP-- 147
           + P F G    DQL  I  +LG+    D     N E    +   L    +  WE      
Sbjct: 227 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 286

Query: 148 ---NADPNALDLLGKMLTFNPHKRIGVEDALAHPY 179
                 P ALD L K+L ++   R+   +A+ HPY
Sbjct: 287 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 6e-28
 Identities = 36/175 (20%), Positives = 60/175 (34%), Gaps = 19/175 (10%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           +CDFG++        ++     +V TR Y +PE  L    Y+   DIWS+G  L EM   
Sbjct: 146 LCDFGVSGQLIDSMANS-----FVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVG 199

Query: 92  RPIFPGK-HYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP--- 147
           R   P       +L     + G             +  S        P   +E+L     
Sbjct: 200 RYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVN 259

Query: 148 ---------NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSW 193
                           D + K L  NP +R  ++  + H ++++      +   W
Sbjct: 260 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGW 314

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 1e-24
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 29/153 (18%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA V    ++    L +   T  Y APE++   + + + +D+WS G +L  M++ 
Sbjct: 144 ISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              +       Q                                +K K  +   +   D 
Sbjct: 203 ELPWDQPSDSCQEYSD----------------------------WKEKKTYLNPWKKIDS 234

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYY 184
             L LL K+L  NP  RI + D     +  +  
Sbjct: 235 APLALLHKILVENPSARITIPDIKKDRWYNKPL 267

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 99.4 bits (247), Expect = 1e-24
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 32/159 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL    DP+            T  + APE+    K      D+WSVG +   ++S 
Sbjct: 167 LIDFGLTAHLDPKQSVK----VTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSG 221

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G++  + L ++     +                                +     
Sbjct: 222 LSPFGGENDDETLRNVKSCDWNMDDS---------------------------AFSGISE 254

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
           +  D + K+L  +P+ R+ +  AL HP+L     P  + 
Sbjct: 255 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 293

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEP 270
           K+L+ +P+ R+ +  AL HP+L     P  + 
Sbjct: 262 KLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 293

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEP 31
           +L+ +P+ R+ +  AL HP+L     P  + 
Sbjct: 263 LLLADPNTRMTIHQALEHPWLTPGNAPGRDS 293

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 3e-24
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 32/160 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I +FG AR   P  +     T       Y APE +      + + D+WS+G ++  ++S 
Sbjct: 145 IIEFGQARQLKPGDNFRLLFT----APEYYAPE-VHQHDVVSTATDMWSLGTLVYVLLSG 199

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F  +     + +I+    +   E                            +     
Sbjct: 200 INPFLAETNQQIIENIMNAEYTFDEE---------------------------AFKEISI 232

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
            A+D + ++L      R+   +AL HP+L+Q  +     V
Sbjct: 233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLI 294
           ++L+     R+    AL HP+L+Q  +     V     +       L K+ L  ++
Sbjct: 240 RLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRT-LKHRRYYHTLIKKDLNMVV 294

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 96.7 bits (240), Expect = 4e-24
 Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 36/157 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILA 86
           + DFG +   DP       L E   T  Y APEI+      N  GY K +D+WS G I+ 
Sbjct: 151 LTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 206

Query: 87  EMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY 146
            +++  P F  +  +  L  I+                        S  ++   P    +
Sbjct: 207 TLLAGSPPFWHRKQMLMLRMIM------------------------SGNYQFGSP---EW 239

Query: 147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
            +      DL+ + L   P KR   E+ALAHP+ +QY
Sbjct: 240 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQY 263
           + L+  P KR   E ALAHP+ +QY
Sbjct: 252 RFLVVQPQKRYTAEEALAHPFFQQY 276

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQY 24
            L+  P KR   E ALAHP+ +QY
Sbjct: 253 FLVVQPQKRYTAEEALAHPFFQQY 276

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.3 bits (239), Expect = 1e-23
 Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 32/151 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+++ DP       L+    T  Y AP  +L  K Y+K++D WS+G I   ++  
Sbjct: 151 ISDFGLSKMEDPGS----VLSTACGTPGYVAP-EVLAQKPYSKAVDCWSIGVIAYILLCG 205

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F  ++       IL                                     + +   
Sbjct: 206 YPPFYDENDAKLFEQILKAEYEFDSP---------------------------YWDDISD 238

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQ 182
           +A D +  ++  +P KR   E AL HP++  
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.4 bits (237), Expect = 1e-23
 Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 37/149 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG +  A      T        T  Y  PE M+  + + + +D+WS+G +  E +  
Sbjct: 147 IADFGWSVHAPSSRRTT-----LCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVG 200

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +P F    Y +    I  +                          +   P          
Sbjct: 201 KPPFEANTYQETYKRISRV--------------------------EFTFP-----DFVTE 229

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
            A DL+ ++L  NP +R  + + L HP++
Sbjct: 230 GARDLISRLLKHNPSQRPMLREVLEHPWI 258

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 96.3 bits (239), Expect = 2e-23
 Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 32/160 (20%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA   +P+      +    AT  + APE +++ +      D+W++G +   ++S 
Sbjct: 170 IIDFGLATKLNPDE----IVKVTTATAEFAAPE-IVDREPVGFYTDMWAIGVLGYVLLSG 224

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G+  L+ L ++         +                            + +  P
Sbjct: 225 LSPFAGEDDLETLQNVKRCDWEFDED---------------------------AFSSVSP 257

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
            A D +  +L   P KR+ V DAL HP+L+  +      +
Sbjct: 258 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRI 297

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.7 bits (235), Expect = 2e-23
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 34/149 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+ + +         +V T +Y +PE  +N   Y +  DIWS+GC+L E+ + 
Sbjct: 155 LGDFGLARILNHDTSFA---KAFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCAL 210

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F      +    I        P   S                               
Sbjct: 211 MPPFTAFSQKELAGKIREGKFRRIPYRYS------------------------------D 240

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYL 180
              +++ +ML    + R  VE+ L +P +
Sbjct: 241 ELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 4e-23
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 32/152 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA   D  ++          T  + APEI +N +      D+WS+G I   ++S 
Sbjct: 158 IIDFGLAHKIDFGNEFK----NIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSG 212

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F G    + L ++  +      E                            + N   
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDE---------------------------YFSNTSA 245

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
            A D + ++L  +P KR+ ++D+L HP+++  
Sbjct: 246 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.7 bits (230), Expect = 2e-22
 Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 36/166 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDIWSVGCILAE 87
           + DFG++               ++ T ++ APE+++      + Y    D+WS+G  L E
Sbjct: 151 LADFGVSAKNTRTIQRR---DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 207

Query: 88  MISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
           M    P     + +  L  I                             K + P      
Sbjct: 208 MAEIEPPHHELNPMRVLLKIA----------------------------KSEPPTLAQPS 239

Query: 148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYD-PADEPVS 192
               N  D L K L  N   R      L HP++    + P  E ++
Sbjct: 240 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIA 285

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYD-PADEPVAEE 274
           K L  N   R      L HP++    + P  E +AE 
Sbjct: 251 KCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEA 287

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 2e-22
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 35/150 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA +         F    + T  + APE+    + Y +S+D+++ G  + EM ++
Sbjct: 156 IGDLGLATLKRAS-----FAKAVIGTPEFMAPEMY--EEKYDESVDVYAFGMCMLEMATS 208

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              +       Q+   +                               V        A P
Sbjct: 209 EYPYSECQNAAQIYRRV----------------------------TSGVKPASFDKVAIP 240

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLE 181
              +++   +  N  +R  ++D L H + +
Sbjct: 241 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 3e-22
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 32/152 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG      PE       +  V T ++ APE ++  K Y   +DIWS+G +  EMI  
Sbjct: 157 LTDFGFCAQITPEQSKR---STMVGTPYWMAPE-VVTRKAYGPKVDIWSLGIMAIEMIEG 212

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P +  ++ L  L  I                     +    L    K+           
Sbjct: 213 EPPYLNENPLRALYLIA-------------------TNGTPELQNPEKLS---------A 244

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQY 183
              D L + L  +  KR   ++ L H +L+  
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.5 bits (219), Expect = 7e-21
 Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 38/161 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMI 89
           + DFG A +  P +   G       T ++ APE++L  +   Y   +D+WS+G    E+ 
Sbjct: 156 LGDFGSASIMAPANSFVG-------TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
             +P     + +  L HI     SP  +                              + 
Sbjct: 209 ERKPPLFNMNAMSALYHIAQN-ESPALQS----------------------------GHW 239

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
                + +   L   P  R   E  L H ++ +   P    
Sbjct: 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIM 280

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPAD-EPVAEEPFRFSMELDDLPKETLKRLIFEE 297
             L   P  R   E  L H ++ +   P     + +       ELD+L    +K+++F+E
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKILFQE 308

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 1e-20
 Identities = 34/171 (19%), Positives = 58/171 (33%), Gaps = 28/171 (16%)

Query: 21  LEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 80
                  A   + DFG A+     +  T        T +Y APE+ L  + Y KS D+WS
Sbjct: 144 YTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYVAPEV-LGPEKYDKSCDMWS 198

Query: 81  VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKV 140
           +G I+  ++   P F   H L     +   +     E                 P     
Sbjct: 199 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE----------------FPNPE-- 240

Query: 141 PWEILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPV 191
                +         L+  +L   P +R+ + + + HP++ Q       P+
Sbjct: 241 -----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 5e-05
 Identities = 25/145 (17%), Positives = 48/145 (33%), Gaps = 16/145 (11%)

Query: 179 YLEQYYDPADEPVS-----WRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSW 233
              + YD + +  S     +    G    ++ H      G      + QY  P  E    
Sbjct: 185 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244

Query: 234 RENW----GKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPF--RFSMELDDLPK 287
            E        +L   P +R+ +   + HP++ Q       P+             +D+ +
Sbjct: 245 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 304

Query: 288 ETLKRLI-----FEETRVFKQEDPN 307
           E    L      +E+ ++ K ED +
Sbjct: 305 EMTSALATMRVDYEQIKIKKIEDAS 329

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 1   MLMFNPHKRIGVEGALAHPYLEQYYDPADEPIC 33
           +L   P +R+ +   + HP++ Q       P+ 
Sbjct: 255 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 287

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 2e-20
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 42/159 (26%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG   +           T++  TR Y  PE +   + + +S  +WS+G +L +M+  
Sbjct: 152 LIDFGSGALLKDTV-----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F     + +                              + F+ +V           
Sbjct: 207 DIPFEHDEEIIRGQ----------------------------VFFRQRVS---------S 229

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEP 190
               L+   L   P  R   E+   HP+++    P +  
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETA 268

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.0 bits (214), Expect = 5e-20
 Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 19/190 (10%)

Query: 26  DPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 85
             + E +    +A + +       + T  + TR YR+PE++L    +    DIWS  C++
Sbjct: 162 VDSPENLIQIKIADLGNACWYDEHY-TNSIQTREYRSPEVLLG-APWGCGADIWSTACLI 219

Query: 86  AEMISNRPIFPGKHY------LDQLNHILGILGSPTPEDLSCIINEK----ARSYLQSLP 135
            E+I+   +F            D +  I+ +LG      L      +    +R  L+++ 
Sbjct: 220 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNIS 279

Query: 136 FKPKVPWE-------ILYPNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
                P E           +      D L  ML  +P KR      + HP+L+      +
Sbjct: 280 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEE 339

Query: 189 EPVSWRENWG 198
             V  RE +G
Sbjct: 340 IRVPDRELYG 349

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 239 KMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFS 279
            ML  +P KR    G + HP+L+      +  V +     S
Sbjct: 310 PMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGS 350

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 6e-20
 Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 39/156 (25%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG A+V  PE         +V T  Y +PE+ L  K   KS D+W++GCI+ ++++ 
Sbjct: 149 ITDFGTAKVLSPESKQA-RANSFVGTAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAG 206

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
            P F   +       I+ +     PE                                 P
Sbjct: 207 LPPFRAGNEYLIFQKIIKLEYDF-PEKFF------------------------------P 235

Query: 152 NALDLLGKMLTFNPHKRIGVEDA------LAHPYLE 181
            A DL+ K+L  +  KR+G E+        AHP+ E
Sbjct: 236 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 2e-17
 Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 36/152 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG+ +        T     +  T  Y APEI+L  + Y  S+D WS G +L EM+  
Sbjct: 144 IADFGMCKENMLGDAKT---NTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIG 199

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           +  F G+   +  + I                              P  P  +     + 
Sbjct: 200 QSPFHGQDEEELFHSIRM--------------------------DNPFYPRWL-----EK 228

Query: 152 NALDLLGKMLTFNPHKRIGVE-DALAHPYLEQ 182
            A DLL K+    P KR+GV  D   HP   +
Sbjct: 229 EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 2e-16
 Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 28/148 (18%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMI 89
           I DFGLA V       +    +   +  + APE++   +   Y+   D+++ G +L E++
Sbjct: 145 IGDFGLATVKS-RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203

Query: 90  SNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
           + +  +   +  DQ+  ++G                  R YL   P   KV       N 
Sbjct: 204 TGQLPYSNINNRDQIIFMVG------------------RGYL--SPDLSKVR-----SNC 238

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAH 177
                 L+ + L     +R      LA 
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.4 bits (182), Expect = 4e-16
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 29/155 (18%)

Query: 31  PICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
            + DFG+AR      +        + T  Y +PE            D++S+GC+L E+++
Sbjct: 151 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLT 209

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
             P F G   +      +                            +  +P    +    
Sbjct: 210 GEPPFTGDSPVSVAYQHVR---------------------------EDPIPPSARHEGLS 242

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYD 185
            +   ++ K L  NP  R      +    L + ++
Sbjct: 243 ADLDAVVLKALAKNPENRYQTAAEMRAD-LVRVHN 276

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 5e-16
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 15/150 (10%)

Query: 32  ICDFGLARVADPEHDHTGF-LTEYVATRWYRAPEIMLNSKG-----YTKSIDIWSVGCIL 85
           I D GLA   D   D         V T+ Y APE++ +S         K  DI+++G + 
Sbjct: 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208

Query: 86  AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEIL 145
            E+     I  G H   QL +   +   P+ E++  ++ E+          +P +P    
Sbjct: 209 WEIARRCSIG-GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--------KLRPNIPNRWQ 259

Query: 146 YPNADPNALDLLGKMLTFNPHKRIGVEDAL 175
              A      ++ +    N   R+      
Sbjct: 260 SCEALRVMAKIMRECWYANGAARLTALRIK 289

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 2e-15
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 33/158 (20%)

Query: 31  PICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
            + DFGL++      +            +     +     G+ K++D WS+G ++ E+++
Sbjct: 169 VLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 227

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               F      +    I                        + L  +P  P         
Sbjct: 228 GASPFTVDGEKNSQAEI----------------------SRRILKSEPPYP-----QEMS 260

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPYLEQY 183
             A DL+ ++L  +P KR+G      ++   H + ++ 
Sbjct: 261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 71.3 bits (174), Expect = 1e-14
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 38/154 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I D GLA     +  H       V T  Y APE++     Y  S D +S+GC+L +++  
Sbjct: 148 ISDLGLACDFSKKKPHA-----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 202

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F      D+       L                                 L  +  P
Sbjct: 203 HSPFRQHKTKDKHEIDRMTLTMAVE----------------------------LPDSFSP 234

Query: 152 NALDLLGKMLTFNPHKRI-----GVEDALAHPYL 180
               LL  +L  + ++R+     G ++    P+ 
Sbjct: 235 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-14
 Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 40/154 (25%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL +    +         +  T  Y APE+ L    Y +++D W +G ++ EM+  
Sbjct: 146 ITDFGLCKEGISDGATMKT---FCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCG 201

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           R  F  + +      IL                       + + F   +          P
Sbjct: 202 RLPFYNQDHERLFELILM----------------------EEIRFPRTLS---------P 230

Query: 152 NALDLLGKMLTFNPHKRIG-----VEDALAHPYL 180
            A  LL  +L  +P +R+G      ++ + H + 
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.5 bits (172), Expect = 2e-14
 Identities = 37/156 (23%), Positives = 58/156 (37%), Gaps = 43/156 (27%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFG A+                 T  Y APE ++++K Y KSID WS G ++ EM++ 
Sbjct: 145 ITDFGFAKYVPDVT------YTLCGTPDYIAPE-VVSTKPYNKSIDWWSFGILIYEMLAG 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
              F   + +     IL                         L F P             
Sbjct: 198 YTPFYDSNTMKTYEKILN----------------------AELRFPPFFN---------E 226

Query: 152 NALDLLGKMLTFNPHKRIG-----VEDALAHPYLEQ 182
           +  DLL +++T +  +R+G      ED   HP+ ++
Sbjct: 227 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.1 bits (168), Expect = 4e-14
 Identities = 22/168 (13%), Positives = 39/168 (23%), Gaps = 32/168 (19%)

Query: 33  CDFGLARVADPEHDHTGF----LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 88
            DFGLA+       H             T  Y +    L     ++  D+ S+G +L   
Sbjct: 148 IDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYF 206

Query: 89  ISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
                 + G     +                            +    K   P E+L   
Sbjct: 207 NLGSLPWQGLKAATKRQKY-----------------------ERISEKKMSTPIEVLCKG 243

Query: 149 ADPNALDLLGKMLTFNPHKRI---GVEDALAHPYLEQYYDPADEPVSW 193
                   L    +     +     +     + +  Q +   D    W
Sbjct: 244 YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY-DYVFDW 290

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 5e-14
 Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 36/166 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGLAR+ +                 + APE  L  + +T   D+WS G +L E+ + 
Sbjct: 154 VADFGLARLIEDNEYTA--RQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTK 210

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            R  +PG    + L+ +      P P +                                
Sbjct: 211 GRVPYPGMVNREVLDQVERGYRMPCPPECP------------------------------ 240

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWREN 196
            +  DL+ +     P +R   E   A  +LE Y+   +      EN
Sbjct: 241 ESLHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQYQPGEN 284

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 2e-13
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 35/155 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL++    + ++    T       + APE  +N   ++   D+WS G ++ E  S 
Sbjct: 148 ISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSY 206

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +  + G    +    +        P                                  
Sbjct: 207 GQKPYRGMKGSEVTAMLEKGERMGCPAGCP------------------------------ 236

Query: 151 PNALDLLGKMLTFNPHKRIG---VEDALAHPYLEQ 182
               DL+    T++   R G   VE  L + Y + 
Sbjct: 237 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 271

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 63.7 bits (154), Expect = 3e-12
 Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 30/168 (17%)

Query: 32  ICDFGLARVADP----EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 87
           + DFG+ +        +H           T  Y +       +  ++  D+ ++G +   
Sbjct: 147 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT-HLGREQSRRDDLEALGHVFMY 205

Query: 88  MISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP 147
            +     + G            I                          K   P   L  
Sbjct: 206 FLRGSLPWQGLKAATNKQKYERIGEK-----------------------KQSTPLRELCA 242

Query: 148 NADPNALDLLGKMLTFNPHKRIGVED--ALAHPYLEQYYDPADEPVSW 193
                    +              +    L    LE+     DE   W
Sbjct: 243 GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW 290

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 6e-12
 Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 31/139 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL R      DH   + E+    +       L ++ ++ + D W  G  L EM + 
Sbjct: 152 IGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +  + G +    L+ I                             +   P      +  
Sbjct: 211 GQEPWIGLNGSQILHKID------------------------KEGERLPRP-----EDCP 241

Query: 151 PNALDLLGKMLTFNPHKRI 169
            +  +++ +     P  R 
Sbjct: 242 QDIYNVMVQCWAHKPEDRP 260

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 9e-12
 Identities = 24/146 (16%), Positives = 39/146 (26%), Gaps = 38/146 (26%)

Query: 33  CDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN- 91
            DFGL + A    D             + APE  L  K ++   D+WS G +L E+ S  
Sbjct: 145 SDFGLTKEASSTQDTGKL------PVKWTAPEA-LREKKFSTKSDVWSFGILLWEIYSFG 197

Query: 92  RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADP 151
           R  +P     D +  +        P+                                 P
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCP------------------------------P 227

Query: 152 NALDLLGKMLTFNPHKRIGVEDALAH 177
              +++      +   R         
Sbjct: 228 AVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 1e-11
 Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 39/167 (23%)

Query: 32  ICDFGLAR-VADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
           + DFGLAR + D E D     T       + A E +   K  TKS D+WS G +L E+++
Sbjct: 171 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS-DVWSFGVLLWELMT 229

Query: 91  N-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
              P +P  +  D   ++L       PE                                
Sbjct: 230 RGAPPYPDVNTFDITVYLLQGRRLLQPEYCP----------------------------- 260

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAH------PYLEQYYDPADEP 190
                +++ K        R    + ++        ++ ++Y   +  
Sbjct: 261 -DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNAT 306

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 1e-11
 Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 45/200 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLA++   E               + A E +L+ + YT   D+WS G  + E+++ 
Sbjct: 152 ITDFGLAKLLGAEEKEY-HAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTF 209

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               + G                    ++S I+ +  R     LP  P            
Sbjct: 210 GSKPYDGI----------------PASEISSILEKGER-----LPQPPICT--------- 239

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIG 210
            +   ++ K    +   R    + +      +             +  + L+    +R+ 
Sbjct: 240 IDVYMIMVKCWMIDADSRPKFRELIIE--FSK----------MARDPQRYLVIQGDERMH 287

Query: 211 VEGALAHPYLEQYYDPADEP 230
           +       +     D  D  
Sbjct: 288 LPSPTDSNFYRALMDEEDMD 307

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 1e-11
 Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 34/147 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL+R    +   +           +  PE +L    ++   DIW+ G ++ E+ S 
Sbjct: 141 VSDFGLSRYVLDDEYTS--SVGSKFPVRWSPPE-VLMYSKFSSKSDIWAFGVLMWEIYSL 197

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +  +      +   HI   L    P   S                              
Sbjct: 198 GKMPYERFTNSETAEHIAQGLRLYRPHLAS------------------------------ 227

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAH 177
                ++         +R   +  L++
Sbjct: 228 EKVYTIMYSCWHEKADERPTFKILLSN 254

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 2e-11
 Identities = 30/148 (20%), Positives = 45/148 (30%), Gaps = 32/148 (21%)

Query: 31  PICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
            ICDFGLAR    + ++            + APE  L    YT   D+WS G +L E+ S
Sbjct: 204 KICDFGLARDIMSDSNYV-VRGNARLPVKWMAPE-SLFEGIYTIKSDVWSYGILLWEIFS 261

Query: 91  N-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
                +PG         ++                           FK   P       A
Sbjct: 262 LGVNPYPGIPVDANFYKLI------------------------QNGFKMDQP-----FYA 292

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDALAH 177
                 ++     F+  KR    +  + 
Sbjct: 293 TEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 3e-11
 Identities = 22/155 (14%), Positives = 43/155 (27%), Gaps = 35/155 (22%)

Query: 31  PICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
            I DFGL++    +  +    +       + AP   +N + ++   D+WS G  + E +S
Sbjct: 149 KISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDVWSYGVTMWEALS 207

Query: 91  N-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
             +  +      + +  I        P +                               
Sbjct: 208 YGQKPYKKMKGPEVMAFIEQGKRMECPPECP----------------------------- 238

Query: 150 DPNALDLLGKMLTFNPHKRIG---VEDALAHPYLE 181
            P    L+     +    R     VE  +   Y  
Sbjct: 239 -PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.2 bits (145), Expect = 5e-11
 Identities = 37/204 (18%), Positives = 62/204 (30%), Gaps = 65/204 (31%)

Query: 31  PICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
            + DFG A+         G       T    APE ++ SKGY K++D W++G ++ EM +
Sbjct: 181 QVTDFGFAKR------VKGRTWTLCGTPEALAPE-IILSKGYNKAVDWWALGVLIYEMAA 233

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
             P F     +     I                          + F              
Sbjct: 234 GYPPFFADQPIQIYEKI----------------------VSGKVRFPSHFS--------- 262

Query: 151 PNALDLLGKMLTFNPHKRIG-----VEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNP 205
            +  DLL  +L  +  KR G     V D   H +                +W  +     
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT------------DWIAIY---- 306

Query: 206 HKRIGVEGALAHPYLEQYYDPADE 229
                 +  +  P++ ++  P D 
Sbjct: 307 ------QRKVEAPFIPKFKGPGDT 324

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 7e-11
 Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 34/159 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL+RV + + + T   +       + APE +   K  + S D+WS G ++ E+++ 
Sbjct: 151 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS-DVWSFGIVMWEVMTY 209

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               +      + +  I      PTP D                                
Sbjct: 210 GERPYWELSNHEVMKAINDGFRLPTPMDCP------------------------------ 239

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADE 189
                L+ +       +R    D ++   L++     D 
Sbjct: 240 SAIYQLMMQCWQQERARRPKFADIVSI--LDKLIRAPDS 276

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 9e-10
 Identities = 20/147 (13%), Positives = 40/147 (27%), Gaps = 34/147 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFG+ R    +       T       + +PE+  +   Y+   D+WS G ++ E+ S 
Sbjct: 142 VSDFGMTRFVLDDQYT--SSTGTKFPVKWASPEV-FSFSRYSSKSDVWSFGVLMWEVFSE 198

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            +  +  +   + +  I        P   S                              
Sbjct: 199 GKIPYENRSNSEVVEDISTGFRLYKPRLAS------------------------------ 228

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAH 177
            +   ++       P  R      L  
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.6 bits (133), Expect = 1e-09
 Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 33/145 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS- 90
           I DFGL+R      D+            +  PE  +    YT   D+W+ G +L E+ S 
Sbjct: 181 IADFGLSRNIYSA-DYYKADGNDAIPIRWMPPE-SIFYNRYTTESDVWAYGVVLWEIFSY 238

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               + G  + + + ++        PE+                                
Sbjct: 239 GLQPYYGMAHEEVIYYVRDGNILACPENCP------------------------------ 268

Query: 151 PNALDLLGKMLTFNPHKRIGVEDAL 175
               +L+    +  P  R       
Sbjct: 269 LELYNLMRLCWSKLPADRPSFCSIH 293

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 2e-09
 Identities = 27/147 (18%), Positives = 43/147 (29%), Gaps = 36/147 (24%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGL+R  +     T           + A E  LN   YT + D+WS G +L E++S 
Sbjct: 168 IADFGLSRGQEVYVKKTMG----RLPVRWMAIE-SLNYSVYTTNSDVWSYGVLLWEIVSL 222

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               + G    +    +        P +                                
Sbjct: 223 GGTPYCGMTCAELYEKLPQGYRLEKPLNCD------------------------------ 252

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAH 177
               DL+ +     P++R      L  
Sbjct: 253 DEVYDLMRQCWREKPYERPSFAQILVS 279

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 2e-09
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 36/154 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR+ +                 + APE +       KS D+WS G +L E++++
Sbjct: 150 IADFGLARLIEDNEYTA--REGAKFPIKWTAPEAINYGTFTIKS-DVWSFGILLTEIVTH 206

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
            R  +PG    + + ++        P++                                
Sbjct: 207 GRIPYPGMTNPEVIQNLERGYRMVRPDNCP------------------------------ 236

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYY 184
                L+       P  R   +   +   LE ++
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSV--LEDFF 268

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.1 bits (132), Expect = 2e-09
 Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 34/149 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTE--YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMI 89
           + DFGL+R  + +     + +         + AP   +  + +T + D+WS G ++ E++
Sbjct: 169 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP-EAIQYRKFTSASDVWSYGIVMWEVM 227

Query: 90  S-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPN 148
           S     +      D +N I      P P D                              
Sbjct: 228 SYGERPYWDMTNQDVINAIEQDYRLPPPMDCP---------------------------- 259

Query: 149 ADPNALDLLGKMLTFNPHKRIGVEDALAH 177
                  L+      + + R      +  
Sbjct: 260 --SALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 4e-09
 Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 34/147 (23%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL+R  +    +    ++      + APE  +N + +T + D+W  G  + E++ +
Sbjct: 149 LGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMH 205

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               F G    D +  I      P P +                                
Sbjct: 206 GVKPFQGVKNNDVIGRIENGERLPMPPNCP------------------------------ 235

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAH 177
           P    L+ K   ++P +R    +  A 
Sbjct: 236 PTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 9e-09
 Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 32/147 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS- 90
           ICDFGLAR    + D+     +      + AP   +  + YT   D+WS G +L E+ S 
Sbjct: 175 ICDFGLARDIYKDPDYV-RKGDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFSL 232

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               +PG    ++    L                            + + P         
Sbjct: 233 GASPYPGVKIDEEFCRRL------------------------KEGTRMRAP-----DYTT 263

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAH 177
           P     +       P +R    + + H
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 20/158 (12%), Positives = 39/158 (24%), Gaps = 36/158 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           + DFGL+R+   +                      L    ++   D+W+ G +L E+ + 
Sbjct: 156 VADFGLSRLMTGDTYTA---HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 212

Query: 92  R-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               +PG         +        PE                                 
Sbjct: 213 GMSPYPGIDLSQVYELLEKDYRMERPEGCP------------------------------ 242

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPAD 188
               +L+     +NP  R    +       E  +  + 
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIHQ--AFETMFQESS 278

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 3e-07
 Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 35/162 (21%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS- 90
           I DFG+ R    E D+     + +    + +PE  L    +T   D+WS G +L E+ + 
Sbjct: 174 IGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATL 231

Query: 91  NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               + G      L  ++       P++                                
Sbjct: 232 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCP------------------------------ 261

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAHPYLEQYYDPADEPVS 192
               +L+     +NP  R    + ++   +++  +P    VS
Sbjct: 262 DMLFELMRMCWQYNPKMRPSFLEIISS--IKEEMEPGFREVS 301

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 3e-07
 Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 33/147 (22%)

Query: 32  ICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMISN 91
           I DFGLAR       +       +  +W       L  + YT   D+WS G +L E+ + 
Sbjct: 176 IADFGLARDIHHIDYYKKTTNGRLPVKWM--APEALFDRIYTHQSDVWSFGVLLWEIFTL 233

Query: 92  -RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNAD 150
               +PG    +    +        P + +                              
Sbjct: 234 GGSPYPGVPVEELFKLLKEGHRMDKPSNCT------------------------------ 263

Query: 151 PNALDLLGKMLTFNPHKRIGVEDALAH 177
                ++       P +R   +  +  
Sbjct: 264 NELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 4e-06
 Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 32/146 (21%)

Query: 31  PICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMIS 90
            ICDFGLAR    + ++            + APE + N   YT   D+WS G  L E+ S
Sbjct: 185 KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFS 242

Query: 91  N-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNA 149
                +PG     +   ++                           F+   P      +A
Sbjct: 243 LGSSPYPGMPVDSKFYKMI------------------------KEGFRMLSP-----EHA 273

Query: 150 DPNALDLLGKMLTFNPHKRIGVEDAL 175
                D++      +P KR   +  +
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIV 299

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	308
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.98
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.98
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.96
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.96
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.96
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.96
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.94
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.94
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.94
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.93
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.93
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.58
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	97.06
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	96.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	96.83
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	96.71
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	96.63
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	96.49
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	96.17
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	96.1
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	96.01
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	95.28
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	95.21
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	95.2
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	94.57
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	94.4
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	94.3
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	94.14
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	94.12
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	94.08
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	94.01
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	93.35
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	93.31
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	93.28
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	92.79
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	92.61
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	92.57
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	92.17
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	91.51
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	91.38
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	90.88
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	90.51
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	90.1
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	89.86
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	87.44
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	86.16
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	85.47
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	85.25
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	82.39
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	82.13
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	80.21

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-40  Score=293.12  Aligned_cols=165  Identities=42%  Similarity=0.773  Sum_probs=150.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.....      .+..+||+.|+|||++.+...++.++||||+||++
T Consensus       143 iHrDiKp~NIL~~-------~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil  209 (346)
T d1cm8a_         143 IHRDLKPGNLAVN-------EDCELKILDFGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM  209 (346)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH
T ss_pred             cccccCcchhhcc-------cccccccccccceeccCCc------cccccccccccCHHHHcCCCCCCccchhhcchHHH
Confidence            5999999999999       8999999999999876532      35678999999999998767789999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|++||.+.+..+++..+....+.++...+..........+....+......+....+.+++++++||.+||++||
T Consensus       210 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP  289 (346)
T d1cm8a_         210 AEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDA  289 (346)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSST
T ss_pred             HHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCCh
Confidence            99999999999999999999999999999998888777777777777888888888888889999999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      .+|||++|+|+||||+.+
T Consensus       290 ~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         290 EQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             TTSCCHHHHHHSGGGTTT
T ss_pred             hHCcCHHHHhcChhhCcC
Confidence            999999999999999653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-40  Score=289.22  Aligned_cols=213  Identities=78%  Similarity=1.280  Sum_probs=176.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+...............+||+.|+|||++.....++.++||||+||++
T Consensus       131 iHRDIKp~NILl~-------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il  203 (345)
T d1pmea_         131 LHRDLKPSNLLLN-------TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL  203 (345)
T ss_dssp             ECCCCCGGGEEEC-------TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHH
T ss_pred             cCCCCCcceEEEC-------CCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCcee
Confidence            6999999999999       889999999999987655433333356678999999999986666789999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      ++|++|++||.+.+..++...+....+.+...............+....+.....++...++.+++++++||.+||+.||
T Consensus       204 ~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  283 (345)
T d1pmea_         204 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNP  283 (345)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSST
T ss_pred             hHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999999999999999999988877777777777778888888888888899999999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFNP  245 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p  245 (308)
                      .+||||+|+|+||||+..                                                              
T Consensus       284 ~~R~ta~e~L~hpf~~~~--------------------------------------------------------------  301 (345)
T d1pmea_         284 HKRIEVEQALAHPYLEQY--------------------------------------------------------------  301 (345)
T ss_dssp             TTSCCHHHHHTSGGGTTT--------------------------------------------------------------
T ss_pred             hHCcCHHHHhcCHhhccC--------------------------------------------------------------
Confidence            999999999999999653                                                              


Q ss_pred             CCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhccCC
Q psy7274         246 HKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQED  305 (308)
Q Consensus       246 ~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  305 (308)
                                        .++.+++....++.++.+..+++.+++++++++|+.+|++.-
T Consensus       302 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~e~~~~~~~~  343 (345)
T d1pmea_         302 ------------------YDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY  343 (345)
T ss_dssp             ------------------CCGGGSCCCSSCC--------CCHHHHHHHHHHHSGGGSTTT
T ss_pred             ------------------CCCccCccccCccCCChhhhhCCHHHHHHHHHHHHHhcCCCC
Confidence                              223334444455677666677899999999999999999753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-39  Score=281.45  Aligned_cols=206  Identities=46%  Similarity=0.772  Sum_probs=176.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      =.||||||+|||++       .++.+|++|||+|......      ..+.+||+.|+|||++.+...++.++||||+||+
T Consensus       142 iiHrDiKp~NILi~-------~~~~~kl~dfg~a~~~~~~------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~  208 (348)
T d2gfsa1         142 IIHRDLKPSNLAVN-------EDCELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  208 (348)
T ss_dssp             CCCCCCCGGGEEEC-------TTCCEEECCC----CCTGG------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHH
T ss_pred             CcccccCCcccccc-------ccccccccccchhcccCcc------cccccccccccCchhhcCCccCCcccchhhhhHH
Confidence            37999999999999       8999999999999765432      3556899999999998876668999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|++||.+.+.......+....+.+..+............+...........+...+..+++++++||.+||+.|
T Consensus       209 l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d  288 (348)
T d2gfsa1         209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD  288 (348)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCC
Confidence            99999999999999999999999999999998888777777777777888888888888888899999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccCCCCCCchhhhhhhhhcccCCCccccccccccccccccccCCCCCcccHHHhhhhhcccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYDPADEPVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVSWRENWGKMLMFN  244 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  244 (308)
                      |.+|+||+|+|+||||+++                                                             
T Consensus       289 P~~R~ta~elL~Hp~f~~~-------------------------------------------------------------  307 (348)
T d2gfsa1         289 SDKRITAAQALAHAYFAQY-------------------------------------------------------------  307 (348)
T ss_dssp             GGGSCCHHHHHTSGGGTTT-------------------------------------------------------------
T ss_pred             hhhCcCHHHHhcCHhhCCC-------------------------------------------------------------
Confidence            9999999999999999543                                                             


Q ss_pred             CCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhccC
Q psy7274         245 PHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQE  304 (308)
Q Consensus       245 p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~  304 (308)
                                         ++|+++|.+ .++++++++.+...+++|++|++|+.+|.+.
T Consensus       308 -------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~e~~~~~p~  347 (348)
T d2gfsa1         308 -------------------HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPP  347 (348)
T ss_dssp             -------------------CCTTSCCCC-CCCCCGGGGCCCCHHHHHHHHHHHHHTCCCC
T ss_pred             -------------------CCCccCCCC-CCCCCcccchhcCHHHHHHHHHHHhhccCCC
Confidence                               455556655 4678888888899999999999999999863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-38  Score=272.66  Aligned_cols=168  Identities=33%  Similarity=0.604  Sum_probs=138.9

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........   ....+||++|+|||++.+...|+.++||||+||++
T Consensus       122 iHrDiKp~NIli~-------~~~~~KL~DFG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil  191 (299)
T d1ua2a_         122 LHRDLKPNNLLLD-------ENGVLKLADFGLAKSFGSPNRA---YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL  191 (299)
T ss_dssp             CCCCCCGGGEEEC-------TTCCEEECCCGGGSTTTSCCCC---CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred             ecccCCcceEEec-------CCCccccccCccccccCCCccc---ccceecChhhccHHHHccCCCCChhhhhhhcchHH
Confidence            6999999999999       8999999999999876543221   34568999999999987767789999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|.+||.+.+..+++..|.+.+|.|..+.+.......   ........+..++...++.+++++++||.+||+.||
T Consensus       192 ~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP  268 (299)
T d1ua2a_         192 AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP---DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNP  268 (299)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST---TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSST
T ss_pred             HHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccc---hhhhhccCCCCChHHhcccCCHHHHHHHHHHccCCh
Confidence            99999999999999999999999999999887665332211   011122334455666778899999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~  186 (308)
                      ++||||+|+|+||||++.+.+
T Consensus       269 ~~R~sa~e~L~Hp~f~~~p~p  289 (299)
T d1ua2a_         269 CARITATQALKMKYFSNRPGP  289 (299)
T ss_dssp             TTSCCHHHHHTSGGGTSSSCC
T ss_pred             hhCcCHHHHhCCHhhCCCCCC
Confidence            999999999999999875443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=262.41  Aligned_cols=162  Identities=40%  Similarity=0.676  Sum_probs=134.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......    .....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       138 vHrDiKp~NILi~-------~~~~~kl~dfg~~~~~~~~~----~~~~~~gT~~Y~APE~~~~-~~y~~~~DiwSlG~il  205 (305)
T d1blxa_         138 VHRDLKPQNILVT-------SSGQIKLADFGLARIYSFQM----ALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIF  205 (305)
T ss_dssp             CCCCCCGGGEEEC-------TTCCEEECSCCSCCCCCGGG----GGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             EecCCCccEEEEc-------CCCCeeecchhhhhhhcccc----cCCCcccChhhcCcchhcC-CCCChhehhhchHHHH
Confidence            6999999999999       88999999999998654322    2456799999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+++..+....|.+....+........    .........+.......+++.+++||.+||++||
T Consensus       206 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP  281 (305)
T d1blxa_         206 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  281 (305)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCG----GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSST
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchh----hhhccccccchhhccccCCHHHHHHHHHHCcCCh
Confidence            999999999999999999999999999988876653221110    1112233444556677889999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ++||||+|+|+||||+++
T Consensus       282 ~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         282 AKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             TTSCCHHHHHTSGGGTTC
T ss_pred             hHCcCHHHHhcChhhcCc
Confidence            999999999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=265.62  Aligned_cols=165  Identities=41%  Similarity=0.771  Sum_probs=125.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||++       .++.+||+|||+++.......    .+..+||+.|+|||++.+ ..++.++||||+||+
T Consensus       140 iiHrDlKP~Nil~~-------~~~~~kl~df~~~~~~~~~~~----~~~~~~t~~y~aPE~l~~-~~~~~~~DiwSlG~~  207 (355)
T d2b1pa1         140 IIHRDLKPSNIVVK-------SDCTLKILDFGLARTAGTSFM----MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI  207 (355)
T ss_dssp             CCCSCCCGGGEEEC-------TTCCEEECCCCC-------------------CCTTCCHHHHTT-CCCCTTHHHHHHHHH
T ss_pred             cccccCCccccccc-------cccceeeechhhhhccccccc----cccccccccccChhhhcC-CCCCCCcccccccch
Confidence            37999999999999       899999999999987654322    456689999999999875 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCC------------CCChh
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYP------------NADPN  152 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~s~~  152 (308)
                      +++|++|++||.+.+...++..+....+.+.++.+.... .....+....+......+...++            ..+++
T Consensus       208 l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  286 (355)
T d2b1pa1         208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ  286 (355)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC-HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh-hhHHHHhhcCccccccccccccccccccccccccccCCHH
Confidence            999999999999999999999999999999888776643 33344444444433333322221            23678


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCCcccc
Q psy7274         153 ALDLLGKMLTFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       153 ~~~ll~~~L~~dP~~R~t~~eil~hp~f~~  182 (308)
                      +++||++||++||++||||+|+|+||||+.
T Consensus       287 ~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         287 ARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            999999999999999999999999999965

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-36  Score=262.73  Aligned_cols=135  Identities=23%  Similarity=0.412  Sum_probs=113.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+.......   .....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       127 iHRDlKP~NILl~-------~~g~vkl~DFG~a~~~~~~~~---~~~~~~GT~~Y~aPE~~~~-~~y~~~~DiwSlGvil  195 (337)
T d1o6la_         127 VYRDIKLENLMLD-------KDGHIKITDFGLCKEGISDGA---TMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM  195 (337)
T ss_dssp             BCCCCCGGGEEEC-------TTSCEEECCCTTCBCSCCTTC---CBCCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHHH
T ss_pred             cccccCHHHeEec-------CCCCEEEeecccccccccCCc---ccccceeCHHHhhhhhccC-CCCChhhcccchhhHH
Confidence            6999999999999       899999999999987643322   2456799999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+..+.+..+....-                               .+...+|+++++||.+||+.||
T Consensus       196 yeml~G~~pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~s~~~~dli~~~L~~dP  244 (337)
T d1o6la_         196 YEMMCGRLPFYNQDHERLFELILMEEI-------------------------------RFPRTLSPEAKSLLAGLLKKDP  244 (337)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCC-------------------------------CCCTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCCCCcCHHHHHHHHhcCCC-------------------------------CCCccCCHHHHHHHHhhccCCc
Confidence            999999999999988777666543211                               0123578999999999999999


Q ss_pred             CCCCC-----HHHHhcCCcccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~  182 (308)
                      .+|++     ++|+++||||+.
T Consensus       245 ~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         245 KQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             TTSTTCSTTTHHHHHTSGGGTT
T ss_pred             hhhcccccccHHHHHcCccccc
Confidence            99994     899999999976

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-36  Score=258.03  Aligned_cols=169  Identities=36%  Similarity=0.655  Sum_probs=139.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......   .....+||+.|+|||++.....++.++||||+||++
T Consensus       124 iHrDiKpeNIl~~-------~~~~~kl~DFG~a~~~~~~~~---~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvil  193 (298)
T d1gz8a_         124 LHRDLKPQNLLIN-------TEGAIKLADFGLARAFGVPVR---TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF  193 (298)
T ss_dssp             CCSCCCGGGEEEC-------TTSCEEECSTTHHHHHCCCSB---CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             EccccCchheeec-------ccCcceeccCCcceeccCCcc---cceeecccceeeehhhhccccCCCccccccccchhh
Confidence            6999999999999       899999999999987754322   245568999999999987766678999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+++..+....+.+....+.....  ...+....+......+....+.+|+++++||.+||+.||
T Consensus       194 y~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP  271 (298)
T d1gz8a_         194 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP  271 (298)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG--STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSST
T ss_pred             hHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccc--ccccccccccccccchhhhccCCCHHHHHHHHHHccCCh
Confidence            999999999999999999999999999887766654322  122223333444455566677889999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccCC
Q psy7274         166 HKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~~  186 (308)
                      .+|||++|+|+||||+++..|
T Consensus       272 ~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         272 NKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TTSCCHHHHHTSGGGTTCCCC
T ss_pred             hHCcCHHHHhCCHhhccCCCC
Confidence            999999999999999887555

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-36  Score=252.92  Aligned_cols=133  Identities=25%  Similarity=0.426  Sum_probs=112.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+......     ....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       128 vHrDiKp~Nill~-------~~~~~kl~DFG~a~~~~~~~-----~~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvil  194 (263)
T d2j4za1         128 IHRDIKPENLLLG-------SAGELKIADFGWSVHAPSSR-----RTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLC  194 (263)
T ss_dssp             CCCCCCGGGEEEC-------TTSCEEECCCCSCSCCCCCC-----CEETTEEGGGCCHHHHTT-CCCCTTHHHHHHHHHH
T ss_pred             eeeeeccccceec-------CCCCEeecccceeeecCCCc-----ccccCCCCcccCHHHHcC-CCCCchhhhhhHhHHH
Confidence            6999999999999       88999999999998765332     345689999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+...-..                               +...+++++.+||.+||+.||
T Consensus       195 yell~G~~Pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~li~~~L~~dp  243 (263)
T d2j4za1         195 YEFLVGKPPFEANTYQETYKRISRVEFT-------------------------------FPDFVTEGARDLISRLLKHNP  243 (263)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHTTCCC-------------------------------CCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCCC-------------------------------CCccCCHHHHHHHHHHccCCH
Confidence            9999999999998887777665432110                               112468999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++|+|+||||+.
T Consensus       244 ~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         244 SQRPMLREVLEHPWITA  260 (263)
T ss_dssp             GGSCCHHHHHTCHHHHH
T ss_pred             hHCcCHHHHHcCcCcCC
Confidence            99999999999999964

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-36  Score=253.89  Aligned_cols=141  Identities=25%  Similarity=0.316  Sum_probs=109.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+....... ....+..+||+.|+|||++.+...++.++||||+||++
T Consensus       125 iHrDiKp~NILl~-------~~~~~KL~DFG~a~~~~~~~~-~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvil  196 (271)
T d1nvra_         125 THRDIKPENLLLD-------ERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL  196 (271)
T ss_dssp             ECSCCCGGGEEEC-------TTCCEEECCCTTCEECEETTE-ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHH
T ss_pred             ccCcccHHHEEEC-------CCCCEEEccchhheeeccCCc-cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHH
Confidence            6999999999999       889999999999997643321 12245679999999999987655457889999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|++||.+.+...............                            ...++.+++++.+||.+||+.||
T Consensus       197 yeml~G~~pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~s~~~~~li~~~L~~dP  248 (271)
T d1nvra_         197 TAMLAGELPWDQPSDSCQEYSDWKEKKTY----------------------------LNPWKKIDSAPLALLHKILVENP  248 (271)
T ss_dssp             HHHHHSSCSCSSSSTTSHHHHHHHTTCTT----------------------------STTGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHhcCCCC----------------------------CCccccCCHHHHHHHHHHcCCCh
Confidence            99999999998765433322222111000                            01123568999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++|+|+||||+.
T Consensus       249 ~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         249 SARITIPDIKKDRWYNK  265 (271)
T ss_dssp             TTSCCHHHHTTCTTTTC
T ss_pred             hHCcCHHHHhcCHhhCc
Confidence            99999999999999964

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-36  Score=254.78  Aligned_cols=138  Identities=30%  Similarity=0.520  Sum_probs=110.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........ ...++.+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       130 iHrDiKp~NIll~-------~~~~vkl~DFG~a~~~~~~~~~-~~~~~~~GT~~Y~APE~~~~-~~~~~~~DiwSlGvil  200 (288)
T d1uu3a_         130 IHRDLKPENILLN-------EDMHIQITDFGTAKVLSPESKQ-ARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCII  200 (288)
T ss_dssp             ECSCCSGGGEEEC-------TTSCEEECCCTTCEECC-----------CCCCGGGCCHHHHHT-CCCCHHHHHHHHHHHH
T ss_pred             EcCcCCccccccC-------CCceEEecccccceecccCCcc-cccccccCCccccCceeecc-CCCCcccceehhhHHH
Confidence            6999999999999       8999999999999987543222 22456789999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+..+.+..|...-.                               .+...+++++++||.+||+.||
T Consensus       201 yell~g~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~p~~~s~~~~~li~~~L~~dP  249 (288)
T d1uu3a_         201 YQLVAGLPPFRAGNEYLIFQKIIKLEY-------------------------------DFPEKFFPKARDLVEKLLVLDA  249 (288)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHTTCC-------------------------------CCCTTCCHHHHHHHHTTSCSSG
T ss_pred             HHHhhCCCCCCCcCHHHHHHHHHcCCC-------------------------------CCCccCCHHHHHHHHHHccCCH
Confidence            999999999999888777766643210                               0113568999999999999999


Q ss_pred             CCCCCHHH------HhcCCccccc
Q psy7274         166 HKRIGVED------ALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~e------il~hp~f~~~  183 (308)
                      .+|+|++|      +++||||+.+
T Consensus       250 ~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         250 TKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             GGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             hHCcCHHHHcCCHHHHcCCccCCC
Confidence            99999988      5889999764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.6e-35  Score=253.28  Aligned_cols=165  Identities=37%  Similarity=0.719  Sum_probs=134.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|.........   ....+||+.|+|||++.+...++.++||||+||++
T Consensus       122 vHrDiKp~NIll~-------~~~~~kl~DfG~a~~~~~~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l  191 (286)
T d1ob3a_         122 LHRDLKPQNLLIN-------REGELKIADFGLARAFGIPVRK---YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF  191 (286)
T ss_dssp             CCSCCCGGGEEEC-------TTSCEEECCTTHHHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred             EecCCCCceeeEc-------CCCCEEecccccceecccCccc---cceecccchhhhHHHHhCCCCCCcceeehhcCcHH
Confidence            6999999999999       8999999999999887543221   34457999999999998767789999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      +||++|+.||.+.+..+++..+....|.+....+.....  ...+..........++....+.+++.+.+||++||+.||
T Consensus       192 ~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP  269 (286)
T d1ob3a_         192 AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE--LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP  269 (286)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG--STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhh--hhhcccccccccCcchhhhcccCCHHHHHHHHHHccCCh
Confidence            999999999999999999999999999988777654322  122223334455566677788899999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      ++|||++|+|+||||++
T Consensus       270 ~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         270 NQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TTSCCHHHHHTSGGGGC
T ss_pred             hHCcCHHHHhcCcccCc
Confidence            99999999999999963

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=263.28  Aligned_cols=160  Identities=23%  Similarity=0.343  Sum_probs=107.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .+|.+||+|||+|+......     .++.+||++|+|||++.+ ..|+.++||||+||++
T Consensus       127 iHRDiKP~NILl~-------~~~~vkl~DFGla~~~~~~~-----~~~~~GT~~Y~APEvl~~-~~y~~~~DiWSlGvil  193 (322)
T d1s9ja_         127 MHRDVKPSNILVN-------SRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL  193 (322)
T ss_dssp             CCSCCSGGGEEEC-------TTCCEEECCCCCCHHHHHHT-----C---CCSSCCCCHHHHHC-SCCCTTHHHHHHHHHH
T ss_pred             EccccCHHHeeEC-------CCCCEEEeeCCCccccCCCc-----cccccCCccccCchHHcC-CCCCcHHHHHHHHHHH
Confidence            6999999999999       89999999999999764321     356799999999999986 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHH-HHHHHHHhhCCCChhhHhhhhh-----------------HHHHHHhhcCCCCCCCCccccCC
Q psy7274          86 AEMISNRPIFPGKHYLD-QLNHILGILGSPTPEDLSCIIN-----------------EKARSYLQSLPFKPKVPWEILYP  147 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~  147 (308)
                      |||++|+.||.+.+... +...+....|.+..........                 ..........+ .+..    ...
T Consensus       194 ~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~  268 (322)
T d1s9ja_         194 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP-PPKL----PSG  268 (322)
T ss_dssp             HHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSC-CCCC----CBT
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccC-CccC----ccc
Confidence            99999999998866432 2222333333222111000000                 00000000000 0000    012


Q ss_pred             CCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         148 NADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       148 ~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ..|.++++||.+||++||.+||||+|+|+||||+..
T Consensus       269 ~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         269 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             TBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence            357899999999999999999999999999999764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-35  Score=250.32  Aligned_cols=138  Identities=26%  Similarity=0.408  Sum_probs=114.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........   ....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       138 iHrDiKp~NILl~-------~~~~vkl~DFG~a~~~~~~~~~---~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil  206 (293)
T d1yhwa1         138 IHRDIKSDNILLG-------MDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  206 (293)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCCTTCEECCSTTCC---BCCCCSCGGGCCHHHHSS-SCBCTHHHHHHHHHHH
T ss_pred             cccCCcHHHeEEC-------CCCcEeeccchhheeecccccc---ccccccCCCccChhhhcC-CCCCchhceehHhHHH
Confidence            6999999999999       8899999999999987543222   356689999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+.... .+..                           ...+.+++++++||.+||+.||
T Consensus       207 yemltG~~Pf~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~s~~~~~li~~~L~~dP  258 (293)
T d1yhwa1         207 IEMIEGEPPYLNENPLRALYLIATNG-TPEL---------------------------QNPEKLSAIFRDFLNRCLDMDV  258 (293)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHHC-SCCC---------------------------SSGGGSCHHHHHHHHHHTCSST
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHhCC-CCCC---------------------------CCcccCCHHHHHHHHHHccCCh
Confidence            99999999999988877776665421 1111                           0113468999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++|+|+||||+.
T Consensus       259 ~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         259 EKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             TTSCCHHHHTTCGGGGG
T ss_pred             hHCcCHHHHhcCHhhCC
Confidence            99999999999999964

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.5e-35  Score=255.27  Aligned_cols=133  Identities=26%  Similarity=0.390  Sum_probs=113.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+.....      ..+.+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       163 iHRDIKP~NILl~-------~~g~ikL~DFG~a~~~~~~------~~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvil  228 (350)
T d1rdqe_         163 IYRDLKPENLLID-------QQGYIQVTDFGFAKRVKGR------TWTLCGTPEALAPEIILS-KGYNKAVDWWALGVLI  228 (350)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECSSC------BCCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             ecCcCCHHHcccC-------CCCCEEeeeceeeeecccc------cccccCccccCCHHHHcC-CCCCccccccchhHHH
Confidence            5999999999999       8999999999999987532      345689999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+....+..|......                               ....+++++.+||.+||+.||
T Consensus       229 yemltG~~Pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~li~~~L~~dP  277 (350)
T d1rdqe_         229 YEMAAGYPPFFADQPIQIYEKIVSGKVR-------------------------------FPSHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------------------CCTTCCHHHHHHHHHHSCSCT
T ss_pred             HHHHhCCCCCCCcCHHHHHHHHhcCCCC-------------------------------CCccCCHHHHHHHHHHhhhCH
Confidence            9999999999999887777776543111                               113568999999999999999


Q ss_pred             CCCC-----CHHHHhcCCccccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~~  183 (308)
                      .+|+     |++++++||||+.+
T Consensus       278 ~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         278 TKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HhccccccccHHHHHcCccccCC
Confidence            9995     89999999999763

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=256.02  Aligned_cols=172  Identities=32%  Similarity=0.485  Sum_probs=129.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCC-CCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHD-HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+|+....... ........+||++|+|||++.+...|+.++||||+||+
T Consensus       139 vHrDlKp~NILl~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvi  211 (318)
T d3blha1         139 LHRDMKAANVLIT-------RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI  211 (318)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             EecCcCchheeec-------CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCce
Confidence            6999999999999       899999999999987654321 11223456899999999999876679999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccC--CCCChhHHHHHHHhcc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILY--PNADPNALDLLGKMLT  162 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~ll~~~L~  162 (308)
                      ++||++|++||.+.+..+.+..+....+.+.+..+................... ......+  ...+++++|||.+||+
T Consensus       212 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dLl~~mL~  290 (318)
T d3blha1         212 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK-RKVKDRLKAYVRDPYALDLIDKLLV  290 (318)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCC-BCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred             eeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhccccccc-ccchhhhccccCCHHHHHHHHHHCc
Confidence            999999999999999999999999999998876655443322222111111111 0110000  1247889999999999


Q ss_pred             cCCCCCCCHHHHhcCCccccccC
Q psy7274         163 FNPHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       163 ~dP~~R~t~~eil~hp~f~~~~~  185 (308)
                      +||++|+||+|+|+||||+..+.
T Consensus       291 ~dP~~R~sa~elL~Hpff~~~p~  313 (318)
T d3blha1         291 LDPAQRIDSDDALNHDFFWSDPM  313 (318)
T ss_dssp             SSTTTSCCHHHHHHSGGGSSSSC
T ss_pred             CChhHCcCHHHHHcChhhccCCC
Confidence            99999999999999999976433

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-35  Score=256.14  Aligned_cols=167  Identities=34%  Similarity=0.681  Sum_probs=134.1

Q ss_pred             CCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++ .+||+|||+|+.......    ..+.+||..|+|||++.+...|+.++||||+||+
T Consensus       144 iHrDiKp~NILl~-------~~~~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~i  212 (350)
T d1q5ka_         144 CHRDIKPQNLLLD-------PDTAVLKLCDFGSAKQLVRGEP----NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV  212 (350)
T ss_dssp             ECCCCCGGGEEEC-------TTTCCEEECCCTTCEECCTTSC----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             cccCCCcceEEEe-------cCCCceeEecccchhhccCCcc----cccccccccccChHHhhcccCCCcceeecccceE
Confidence            6999999999998       654 899999999987754322    3556899999999998876779999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCc-cccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPW-EILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|||++|++||.+.+..+++..+...+|.+..+.+........   ....+.....++ ....+..++++.+||.+||++
T Consensus       213 l~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~  289 (350)
T d1q5ka_         213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY  289 (350)
T ss_dssp             HHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC------CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCS
T ss_pred             EEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh---hccccccccCchhhhcccCCCHHHHHHHHHHccC
Confidence            9999999999999999999999999999998877664322111   011122222222 233456899999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccccCC
Q psy7274         164 NPHKRIGVEDALAHPYLEQYYDP  186 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~~~~  186 (308)
                      ||.+||||+|+|+||||+++..+
T Consensus       290 dP~~R~ta~e~L~Hp~f~~~~~~  312 (350)
T d1q5ka_         290 TPTARLTPLEACAHSFFDELRDP  312 (350)
T ss_dssp             SGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             ChhHCcCHHHHhcCHhhccccCC
Confidence            99999999999999999876543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-35  Score=248.57  Aligned_cols=134  Identities=25%  Similarity=0.425  Sum_probs=103.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++.+||+|||+|+.......   ..+..+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       136 iHrDiKp~NIll~-------~~~~vkl~DFG~a~~~~~~~~---~~~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvil  204 (269)
T d2java1         136 LHRDLKPANVFLD-------GKQNVKLGDFGLARILNHDTS---FAKAFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLL  204 (269)
T ss_dssp             ----CCGGGEEEC-------TTSCEEECCHHHHHHC--------------CCCSCCCHHHHTT-CCCCHHHHHHHHHHHH
T ss_pred             EeCcCchhhcCcC-------CCCcEEEeeccceeecccCCC---ccccCCCCcccCCHHHHcC-CCCChHHHHHhhCHHH
Confidence            6999999999999       899999999999998754322   2356799999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+..+....+....-                              ..+...+|+++.+||.+||+.||
T Consensus       205 yel~tg~~Pf~~~~~~~~~~~i~~~~~------------------------------~~~~~~~s~~l~~li~~~L~~dp  254 (269)
T d2java1         205 YELCALMPPFTAFSQKELAGKIREGKF------------------------------RRIPYRYSDELNEIITRMLNLKD  254 (269)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHTCC------------------------------CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHcCCC------------------------------CCCCcccCHHHHHHHHHHcCCCh
Confidence            999999999999887776666543211                              01123568999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+|||++|+|+|||+
T Consensus       255 ~~Rps~~ell~hp~i  269 (269)
T d2java1         255 YHRPSVEEILENPLI  269 (269)
T ss_dssp             GGSCCHHHHHTSTTC
T ss_pred             hHCcCHHHHHhCCcC
Confidence            999999999999995

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-34  Score=248.82  Aligned_cols=133  Identities=28%  Similarity=0.432  Sum_probs=113.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+.....      ..+.+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       126 iHrDiKp~NILl~-------~~g~vkL~DFG~a~~~~~~------~~~~~Gt~~Y~APE~l~~-~~y~~~~DiwSlGvil  191 (316)
T d1fota_         126 IYRDLKPENILLD-------KNGHIKITDFGFAKYVPDV------TYTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILI  191 (316)
T ss_dssp             ECCCCCGGGEEEC-------TTSCEEECCCSSCEECSSC------BCCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHH
T ss_pred             EccccCchheeEc-------CCCCEEEecCccceEeccc------cccccCcccccCHHHHcC-CCCCchhhccccchhH
Confidence            6999999999999       8999999999999876432      345699999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..+...-..                               ..+.+++++.++|.+||+.||
T Consensus       192 yemltG~~Pf~~~~~~~~~~~i~~~~~~-------------------------------~p~~~s~~~~~li~~~L~~dp  240 (316)
T d1fota_         192 YEMLAGYTPFYDSNTMKTYEKILNAELR-------------------------------FPPFFNEDVKDLLSRLITRDL  240 (316)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHCCCC-------------------------------CCTTSCHHHHHHHHHHTCSCT
T ss_pred             HHHHhCCCCCCCcCHHHHHHHHHcCCCC-------------------------------CCCCCCHHHHHHHHHHhhhCH
Confidence            9999999999999888777776542111                               123568999999999999999


Q ss_pred             CCCC-----CHHHHhcCCccccc
Q psy7274         166 HKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~-----t~~eil~hp~f~~~  183 (308)
                      .+|+     |++++++||||+++
T Consensus       241 ~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         241 SQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HhccccchhhHHHHHcCcccccC
Confidence            9997     89999999999773

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=9.9e-35  Score=255.84  Aligned_cols=138  Identities=22%  Similarity=0.320  Sum_probs=111.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .+|.+||+|||+|+......     ....+||+.|+|||++.++..|+.++||||+||++
T Consensus       129 iHrDlKP~NILl~-------~~g~iKl~DFGla~~~~~~~-----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvil  196 (364)
T d1omwa3         129 VYRDLKPANILLD-------EHGHVRISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML  196 (364)
T ss_dssp             ECCCCSGGGEEEC-------SSSCEEECCCTTCEECSSSC-----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHH
T ss_pred             cceeeccceeEEc-------CCCcEEEeeeceeeecCCCc-----ccccccccccchhHHhhcCCCCCcccchhHHHHHH
Confidence            6999999999999       89999999999999775432     34568999999999987666799999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+..+...........+                            ......+++++++||.+||+.||
T Consensus       197 yemltG~~Pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~s~~~~~li~~~L~~dP  248 (364)
T d1omwa3         197 FKLLRGHSPFRQHKTKDKHEIDRMTLTMA----------------------------VELPDSFSPELRSLLEGLLQRDV  248 (364)
T ss_dssp             HHHHHSSCSSCSSCSSCHHHHHHHSSSCC----------------------------CCCCSSSCHHHHHHHHHHTCSST
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhcccCC----------------------------CCCCCCCCHHHHHHHHHHcccCH
Confidence            99999999998765433322222111111                            01123578999999999999999


Q ss_pred             CCCCC-----HHHHhcCCccccc
Q psy7274         166 HKRIG-----VEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t-----~~eil~hp~f~~~  183 (308)
                      .+|+|     |+|+++||||+++
T Consensus       249 ~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         249 NRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             TTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             HHhCCCcccCHHHHHcCccccCC
Confidence            99999     7999999999763

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=245.22  Aligned_cols=135  Identities=19%  Similarity=0.335  Sum_probs=106.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++      ..++.+||+|||+|+.....     ...+.+||+.|+|||++.+  .|+.++||||+||++
T Consensus       136 iHrDiKp~NILl~------~~~~~~Kl~DFGla~~~~~~-----~~~~~~GT~~Y~aPE~~~~--~~~~~~DIwSlGvil  202 (270)
T d1t4ha_         136 IHRDLKCDNIFIT------GPTGSVKIGDLGLATLKRAS-----FAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCM  202 (270)
T ss_dssp             CCSCCCGGGEEES------STTSCEEECCTTGGGGCCTT-----SBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHH
T ss_pred             EeCCcChhhceee------CCCCCEEEeecCcceeccCC-----ccCCcccCccccCHHHhCC--CCCCcCchhhHHHHH
Confidence            7999999999996      15789999999999865432     1356789999999998753  499999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+......+...+.. +.++.                           ......++++.+||.+||+.||
T Consensus       203 yel~~g~~Pf~~~~~~~~~~~~i~~-~~~~~---------------------------~~~~~~~~~~~~li~~~l~~dp  254 (270)
T d1t4ha_         203 LEMATSEYPYSECQNAAQIYRRVTS-GVKPA---------------------------SFDKVAIPEVKEIIEGCIRQNK  254 (270)
T ss_dssp             HHHHHSSCTTTTCSSHHHHHHHHTT-TCCCG---------------------------GGGGCCCHHHHHHHHHHSCSSG
T ss_pred             HHHHHCCCCCCCcccHHHHHHHHHc-CCCCc---------------------------ccCccCCHHHHHHHHHHccCCH
Confidence            9999999999876654443332211 11111                           1112467899999999999999


Q ss_pred             CCCCCHHHHhcCCccc
Q psy7274         166 HKRIGVEDALAHPYLE  181 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~  181 (308)
                      ++|||++|+|+||||+
T Consensus       255 ~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         255 DERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             GGSCCHHHHHTSGGGC
T ss_pred             hHCcCHHHHhCCcccC
Confidence            9999999999999995

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.6e-34  Score=252.99  Aligned_cols=143  Identities=22%  Similarity=0.352  Sum_probs=118.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.     +.++.+||+|||+|+.......    ....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       146 iHrDiKp~NIll~~-----~~~~~vkL~DFG~a~~~~~~~~----~~~~~gT~~Y~aPEv~~~-~~~~~~~DiwSlGvil  215 (350)
T d1koaa2         146 VHLDLKPENIMFTT-----KRSNELKLIDFGLTAHLDPKQS----VKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLS  215 (350)
T ss_dssp             ECCCCCGGGEEESS-----TTSCCEEECCCTTCEECCTTSC----EEEECSCTTTCCHHHHHT-CCBCHHHHHHHHHHHH
T ss_pred             eeeeechhHeeecc-----CCCCeEEEeecchheecccccc----cceecCcccccCHHHHcC-CCCChhHhhhhhhHHH
Confidence            59999999999961     1468899999999998754321    355789999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..|......+....                           ++.+|+++++||.+||+.||
T Consensus       216 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~s~~~~~li~~~L~~dP  268 (350)
T d1koaa2         216 YILLSGLSPFGGENDDETLRNVKSCDWNMDDSA---------------------------FSGISEDGKDFIRKLLLADP  268 (350)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGG---------------------------GGGCCHHHHHHHHHHCCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc---------------------------ccCCCHHHHHHHHHHccCCh
Confidence            999999999999998888888765433322211                           23568999999999999999


Q ss_pred             CCCCCHHHHhcCCccccccC
Q psy7274         166 HKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~~  185 (308)
                      ++|||++|+|+||||+....
T Consensus       269 ~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         269 NTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             GGSCCHHHHHHSTTTSCTTC
T ss_pred             hHCcCHHHHhcCcccCCCCC
Confidence            99999999999999987533

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-34  Score=249.88  Aligned_cols=143  Identities=27%  Similarity=0.439  Sum_probs=103.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      -.||||||+|||+.    ..+.++.+||+|||+|+......    ...+.+||+.|+|||++.+ ..|+.++||||+||+
T Consensus       128 iiHrDiKp~Nil~~----~~~~~~~vkl~DFG~a~~~~~~~----~~~~~~GT~~y~APE~~~~-~~~~~~~DiwSlGvi  198 (307)
T d1a06a_         128 IVHRDLKPENLLYY----SLDEDSKIMISDFGLSKMEDPGS----VLSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVI  198 (307)
T ss_dssp             CCCSCCCGGGEEES----SSSTTCCEEECCC----------------------CTTSCHHHHTT-CCCCTHHHHHHHHHH
T ss_pred             eeeEEecccceeec----ccCCCceEEEeccceeEEccCCC----eeeeeeeCccccCcHHHcC-CCCCcHHHhhhhhHH
Confidence            36999999999995    11257899999999998765432    1355789999999999865 569999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|||++|+.||.+.+..+....+......++.                           ...+.+|+++.+||.+||+.|
T Consensus       199 lyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~s~~~~~li~~~L~~d  251 (307)
T d1a06a_         199 AYILLCGYPPFYDENDAKLFEQILKAEYEFDS---------------------------PYWDDISDSAKDFIRHLMEKD  251 (307)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCT---------------------------TTTTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhccCCCCCC---------------------------ccccCCCHHHHHHHHHHccCC
Confidence            99999999999998887777666542211111                           122467899999999999999


Q ss_pred             CCCCCCHHHHhcCCccccc
Q psy7274         165 PHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~  183 (308)
                      |++|||++|+++||||++.
T Consensus       252 P~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         252 PEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             GGGSCCHHHHHHSTTTTSS
T ss_pred             HhHCcCHHHHhcCHhhCCC
Confidence            9999999999999999753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=247.70  Aligned_cols=139  Identities=23%  Similarity=0.322  Sum_probs=111.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC----CCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++       .++.+||+|||+|+......   ...++.+||+.|+|||++..    ...|+.++||||+
T Consensus       132 vHrDiKp~NIll~-------~~~~~Kl~DFG~a~~~~~~~---~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSl  201 (288)
T d2jfla1         132 IHRDLKAGNILFT-------LDGDIKLADFGVSAKNTRTI---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL  201 (288)
T ss_dssp             ECCCCSGGGEEEC-------TTSCEEECCCTTCEECHHHH---HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHH
T ss_pred             EEeecChhheeEC-------CCCCEEEEechhhhccCCCc---ccccccccccccCCHHHHhhcccCCCCCChhhhHHHH
Confidence            5999999999999       89999999999997653221   11345689999999999852    3458999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||++|||++|+.||.+.+..+.+..+....  ++.                          ....+.+++++.+||.+||
T Consensus       202 Gvilyemltg~~Pf~~~~~~~~~~~i~~~~--~~~--------------------------~~~~~~~s~~~~~li~~~L  253 (288)
T d2jfla1         202 GITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPT--------------------------LAQPSRWSSNFKDFLKKCL  253 (288)
T ss_dssp             HHHHHHHHHSSCTTTTSCGGGHHHHHHHSC--CCC--------------------------CSSGGGSCHHHHHHHHHHS
T ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CCC--------------------------CCccccCCHHHHHHHHHHc
Confidence            999999999999999988777766655321  100                          0111346899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCcccc
Q psy7274         162 TFNPHKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       162 ~~dP~~R~t~~eil~hp~f~~  182 (308)
                      +.||.+|||++|+|+||||+.
T Consensus       254 ~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         254 EKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             CSSTTTSCCHHHHTTSGGGCC
T ss_pred             cCChhHCcCHHHHhcCcccCC
Confidence            999999999999999999964

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.4e-34  Score=246.87  Aligned_cols=135  Identities=22%  Similarity=0.369  Sum_probs=112.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .++.+||+|||+|+....       ....+||+.|+|||++.+.  ..|+.++||||+||
T Consensus       137 iHrDiKp~NILl~-------~~~~~Kl~DFG~a~~~~~-------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGv  202 (309)
T d1u5ra_         137 IHRDVKAGNILLS-------EPGLVKLGDFGSASIMAP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI  202 (309)
T ss_dssp             BCCCCSGGGEEEE-------TTTEEEECCCTTCBSSSS-------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHH
T ss_pred             eccCCCcceEEEC-------CCCCEEEeecccccccCC-------CCccccCccccCHHHHhccCCCCcCchhhhhhHHH
Confidence            6999999999999       899999999999987543       2346899999999998642  34899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|||++|+.||.+.+..+.+..+......+                             .....+|+++.+||.+||+.
T Consensus       203 ilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------~~~~~~s~~~~~li~~~L~~  253 (309)
T d1u5ra_         203 TCIELAERKPPLFNMNAMSALYHIAQNESPA-----------------------------LQSGHWSEYFRNFVDSCLQK  253 (309)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-----------------------------CSCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CCCCCCCHHHHHHHHHHCcC
Confidence            9999999999999988877776665421100                             00124689999999999999


Q ss_pred             CCCCCCCHHHHhcCCccccc
Q psy7274         164 NPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       164 dP~~R~t~~eil~hp~f~~~  183 (308)
                      ||.+|||++|+|+||||...
T Consensus       254 dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         254 IPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             SGGGSCCHHHHTTCHHHHSC
T ss_pred             ChhHCcCHHHHHhCHHhcCC
Confidence            99999999999999999753

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-34  Score=246.60  Aligned_cols=136  Identities=28%  Similarity=0.438  Sum_probs=114.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       +++.+||+|||+|+.......   ..+..+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       125 iHrDikp~NiL~~-------~~~~~kl~DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  193 (320)
T d1xjda_         125 VYRDLKLDNILLD-------KDGHIKIADFGMCKENMLGDA---KTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLL  193 (320)
T ss_dssp             BCCCCCGGGEEEC-------TTSCEEECCCTTCBCCCCTTC---CBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             eeccCcccceeec-------CCCceeccccchhhhcccccc---cccccCCCCCcCCHHHHcC-CCCCchhhhhhhhHHH
Confidence            6999999999999       899999999999987654322   2456789999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+..+.+..+...  .+.                             ....+|+++.+||.+||+.||
T Consensus       194 yemltG~~PF~~~~~~~~~~~i~~~--~~~-----------------------------~p~~~s~~~~dli~~~L~~dP  242 (320)
T d1xjda_         194 YEMLIGQSPFHGQDEEELFHSIRMD--NPF-----------------------------YPRWLEKEAKDLLVKLFVREP  242 (320)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHC--CCC-----------------------------CCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcC--CCC-----------------------------CCccCCHHHHHHHHHhcccCC
Confidence            9999999999999887777666431  110                             113468999999999999999


Q ss_pred             CCCCCHH-HHhcCCccccc
Q psy7274         166 HKRIGVE-DALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~-eil~hp~f~~~  183 (308)
                      .+|||++ ++++||||+++
T Consensus       243 ~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         243 EKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             GGSBTTBSCGGGSGGGTTC
T ss_pred             CCCcCHHHHHHhCchhccC
Confidence            9999996 89999999763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=6.9e-34  Score=249.18  Aligned_cols=142  Identities=27%  Similarity=0.405  Sum_probs=118.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.     ..++.+||+|||+|+......    .....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       149 iHRDiKp~NILl~~-----~~~~~vkL~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  218 (352)
T d1koba_         149 VHLDIKPENIMCET-----KKASSVKIIDFGLATKLNPDE----IVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLG  218 (352)
T ss_dssp             ECCCCCGGGEEESS-----TTCCCEEECCCTTCEECCTTS----CEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHH
T ss_pred             eecccccccccccc-----cCCCeEEEeecccceecCCCC----ceeeccCcccccCHHHHcC-CCCCCccchHHHHHHH
Confidence            69999999999972     146899999999999876432    1355689999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|+.||.+.+..+.+..|......++.                           ..++.+++++.+||.+||+.||
T Consensus       219 yelltG~~Pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~s~~~~~li~~~L~~dp  271 (352)
T d1koba_         219 YVLLSGLSPFAGEDDLETLQNVKRCDWEFDE---------------------------DAFSSVSPEAKDFIKNLLQKEP  271 (352)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHHHCCCCCCS---------------------------STTTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---------------------------ccccCCCHHHHHHHHHHccCCh
Confidence            9999999999999988888777654332221                           1234678999999999999999


Q ss_pred             CCCCCHHHHhcCCcccccc
Q psy7274         166 HKRIGVEDALAHPYLEQYY  184 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~~  184 (308)
                      .+|||++|+|+||||+...
T Consensus       272 ~~R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         272 RKRLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             GGSCCHHHHHTSTTTSSCC
T ss_pred             hHCcCHHHHhcCHhhCCCc
Confidence            9999999999999998643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-33  Score=241.98  Aligned_cols=142  Identities=25%  Similarity=0.393  Sum_probs=114.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.   .....+.+||+|||+|+.......    ..+.+||+.|+|||++.+ ..++.++||||+||++
T Consensus       135 vHrDiKp~Nill~~---~~~~~~~vkl~DfG~a~~~~~~~~----~~~~~~t~~y~APE~~~~-~~~~~~~DiwSlGvil  206 (293)
T d1jksa_         135 AHFDLKPENIMLLD---RNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVIT  206 (293)
T ss_dssp             ECCCCSGGGEEESC---SSSSSCCEEECCCTTCEECTTSCB----CSCCCCCGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             eecccccceEEEec---CCCcccceEecchhhhhhcCCCcc----ccccCCCCcccCHHHHcC-CCCCCcccchhhhHHH
Confidence            69999999999981   111123699999999988754322    345689999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+..+.+..+.......+...                           .+.+|+++++||.+||+.||
T Consensus       207 yell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------~~~~s~~~~~li~~~L~~dP  259 (293)
T d1jksa_         207 YILLSGASPFLGDTKQETLANVSAVNYEFEDEY---------------------------FSNTSALAKDFIRRLLVKDP  259 (293)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHH---------------------------HTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchh---------------------------cCCCCHHHHHHHHHHccCCh
Confidence            999999999999998888777765433222221                           23568999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++|+|+||||+.
T Consensus       260 ~~R~s~~eil~hp~~~~  276 (293)
T d1jksa_         260 KKRMTIQDSLQHPWIKP  276 (293)
T ss_dssp             GGSCCHHHHHHSTTTCC
T ss_pred             hHCcCHHHHhcCcccCC
Confidence            99999999999999975

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-33  Score=239.12  Aligned_cols=168  Identities=32%  Similarity=0.592  Sum_probs=131.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||.|+........   .....++..|+|||++.+...++.++||||+||++
T Consensus       123 vHrDiKP~NIli~-------~~~~~kl~DFG~a~~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il  192 (292)
T d1unla_         123 LHRDLKPQNLLIN-------RNGELKLANFGLARAFGIPVRC---YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF  192 (292)
T ss_dssp             ECCCCSGGGEEEC-------TTCCEEECCCTTCEECCSCCSC---CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred             eeecccCcccccc-------cCCceeeeecchhhcccCCCcc---ceeeccccchhhhhHhccCCCCCchhhccccchHH
Confidence            6999999999999       8899999999999987543322   34457889999999987766689999999999999


Q ss_pred             HHHhhCCCC-CCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRPI-FPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~p-f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++|+.| |.+.+..+++..+....+.+....+.......  .+................+..++.+++||.+||+.|
T Consensus       193 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~d  270 (292)
T d1unla_         193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP--DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCN  270 (292)
T ss_dssp             HHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST--TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred             HHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcc--cccccccccccchhhhccccCCHHHHHHHHHHccCC
Confidence            999998865 67888888999999999988776655432110  000000111222334456678999999999999999


Q ss_pred             CCCCCCHHHHhcCCccccccC
Q psy7274         165 PHKRIGVEDALAHPYLEQYYD  185 (308)
Q Consensus       165 P~~R~t~~eil~hp~f~~~~~  185 (308)
                      |.+||||+|+|+||||+++..
T Consensus       271 P~~R~sa~e~L~Hp~f~~~~~  291 (292)
T d1unla_         271 PVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             GGGSCCHHHHTTSGGGSSCSC
T ss_pred             hhHCcCHHHHhcChhhcCCCC
Confidence            999999999999999987654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.3e-33  Score=236.45  Aligned_cols=140  Identities=31%  Similarity=0.510  Sum_probs=116.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhC-----CCCCCchhhHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLN-----SKGYTKSIDIWS   80 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DiWS   80 (308)
                      .||||||+|||++       .++.+||+|||+|+.......    .+..+||..|+|||++.+     ...++.++||||
T Consensus       132 vHrDlkp~Nill~-------~~~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~Diws  200 (277)
T d1phka_         132 VHRDLKPENILLD-------DDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS  200 (277)
T ss_dssp             ECSCCSGGGEEEC-------TTCCEEECCCTTCEECCTTCC----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred             cccccccceEEEc-------CCCCeEEccchheeEccCCCc----eeeeeccCCCCCHHHhhccccccCCCCCchheEcc
Confidence            5999999999999       899999999999998764322    355789999999999863     344789999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHh
Q psy7274          81 VGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKM  160 (308)
Q Consensus        81 lG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~  160 (308)
                      +||++|+|++|+.||.+.+..+.+..+...-..++..                           ..+++|+++++||.+|
T Consensus       201 lGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~s~~~~~li~~~  253 (277)
T d1phka_         201 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP---------------------------EWDDYSDTVKDLVSRF  253 (277)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT---------------------------TGGGSCHHHHHHHHHH
T ss_pred             cchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc---------------------------ccccCCHHHHHHHHHH
Confidence            9999999999999999999888777776532211111                           1235789999999999


Q ss_pred             cccCCCCCCCHHHHhcCCccccc
Q psy7274         161 LTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       161 L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      |+.||.+|||++|+|+||||+.+
T Consensus       254 L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         254 LVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             CCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             ccCChhHCcCHHHHHcCHHHHHh
Confidence            99999999999999999999764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.98  E-value=5.9e-33  Score=241.79  Aligned_cols=167  Identities=28%  Similarity=0.512  Sum_probs=124.2

Q ss_pred             CCCCCCCCCcccCccccccCCCC-CceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPA-DEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~-~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++ .+||+|||+|+.......    .+..+||+.|+|||++.+...++.++||||+||+
T Consensus       151 vHrDiKp~NILi~-------~~~~~vkl~DFG~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~  219 (328)
T d3bqca1         151 MHRDVKPHNVMID-------HEHRKLRLIDWGLAEFYHPGQE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM  219 (328)
T ss_dssp             ECCCCSGGGEEEE-------TTTTEEEECCGGGCEECCTTCC----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             ccccccccceEEc-------CCCCeeeecccccceeccCCCc----ccccccCccccCcccccCCCCCCcccchhhhhhh
Confidence            6999999999998       544 699999999987754332    3556899999999999877778999999999999


Q ss_pred             HHHHhhCCCCCCC-CCHHHHHHHHHHhhCCCChhhHhhhhhHH-HHHHhhcCCCCCCCCcccc-----CCCCChhHHHHH
Q psy7274          85 LAEMISNRPIFPG-KHYLDQLNHILGILGSPTPEDLSCIINEK-ARSYLQSLPFKPKVPWEIL-----YPNADPNALDLL  157 (308)
Q Consensus        85 l~ell~g~~pf~~-~~~~~~l~~i~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~ll  157 (308)
                      +++|++|+.||.. .+..++...+...+|.+....+....... ...+...........+...     ...+++++++||
T Consensus       220 l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli  299 (328)
T d3bqca1         220 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL  299 (328)
T ss_dssp             HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHH
T ss_pred             hHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHH
Confidence            9999999988854 55677788888888866554433221111 1111122222222222222     234689999999


Q ss_pred             HHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         158 GKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       158 ~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ++||++||.+|+|++|+|+||||+..
T Consensus       300 ~~mL~~dP~~R~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         300 DKLLRYDHQSRLTAREAMEHPYFYTV  325 (328)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred             HHHccCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2e-33  Score=238.37  Aligned_cols=130  Identities=22%  Similarity=0.366  Sum_probs=105.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.      +++.+||+|||+|+.....     ..++.+||+.|+|||++.+...++.++||||+||++
T Consensus       132 iHrDiKp~NIll~~------~~~~vkl~DFG~a~~~~~~-----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvil  200 (273)
T d1xwsa_         132 LHRDIKDENILIDL------NRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL  200 (273)
T ss_dssp             ECSCCSGGGEEEET------TTTEEEECCCTTCEECCSS-----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHH
T ss_pred             ccccCcccceEEec------CCCeEEECccccceecccc-----cccccccCCCcCCHHHHcCCCCCCcccccccceeee
Confidence            59999999999971      3478999999999875432     145678999999999997766567889999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |||++|+.||.+.+.      +...  .                             ..+.+.+|+++.+||.+||+.||
T Consensus       201 yell~g~~Pf~~~~~------i~~~--~-----------------------------~~~~~~~s~~~~~li~~~L~~dp  243 (273)
T d1xwsa_         201 YDMVCGDIPFEHDEE------IIRG--Q-----------------------------VFFRQRVSSECQHLIRWCLALRP  243 (273)
T ss_dssp             HHHHHSSCSCCSHHH------HHHC--C-----------------------------CCCSSCCCHHHHHHHHHHTCSSG
T ss_pred             hhHhhCCCCCCCchH------Hhhc--c-----------------------------cCCCCCCCHHHHHHHHHHccCCH
Confidence            999999999976321      1110  0                             01123578999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ++|||++|+|+||||++.
T Consensus       244 ~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         244 SDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             GGSCCHHHHHTSGGGSSC
T ss_pred             hHCcCHHHHhcCHhhCCC
Confidence            999999999999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.2e-33  Score=241.31  Aligned_cols=146  Identities=24%  Similarity=0.388  Sum_probs=107.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.    .+..+.+||+|||+|+.......    ....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       133 iHRDiKp~NIll~~----~~~~~~~Kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~y~~~~DiwSlGvil  203 (335)
T d2ozaa1         133 AHRDVKPENLLYTS----KRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIM  203 (335)
T ss_dssp             ECCCCSGGGEEESC----SSTTCCEEECCCTTCEECCCCCC----CCCCSCCCSSCCCCCCCG-GGGSHHHHHHHHHHHH
T ss_pred             cccccccccccccc----ccccccccccccceeeeccCCCc----cccccCCcccCCcHHHcC-CCCCHHHHHHhhchhH
Confidence            69999999999971    12356799999999997654322    355689999999998754 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|++||.+.+.......+.........                      ..+ ....+.+|+++.+||.+||+.||
T Consensus       204 y~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~----------------------~~~-~~~~~~~s~~~~~li~~~L~~dP  260 (335)
T d2ozaa1         204 YILLCGYPPFYSNHGLAISPGMKTRIRMGQY----------------------EFP-NPEWSEVSEEVKMLIRNLLKTEP  260 (335)
T ss_dssp             HHHTTSSCSCEETTCC--------CCCSCSS----------------------SCC-TTHHHHSCHHHHHHHHHHSCSST
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHHHhcCCC----------------------CCC-CcccccCCHHHHHHHHHHccCCh
Confidence            9999999999887654444333221110000                      000 00112468999999999999999


Q ss_pred             CCCCCHHHHhcCCccccc
Q psy7274         166 HKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~~  183 (308)
                      ++|||++|+++||||...
T Consensus       261 ~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         261 TQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             TTSCCHHHHHHSHHHHTT
T ss_pred             hHCcCHHHHHcCHHhhCC
Confidence            999999999999999653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.2e-32  Score=235.18  Aligned_cols=140  Identities=22%  Similarity=0.352  Sum_probs=116.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++.     +..+.+||+|||+|+......    .....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       124 iHrDlKp~NIll~~-----~~~~~ikl~DFG~~~~~~~~~----~~~~~~~t~~y~ape~~~~-~~~~~~~DiWSlGvil  193 (321)
T d1tkia_         124 GHFDIRPENIIYQT-----RRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLV  193 (321)
T ss_dssp             ECCCCCGGGEEESS-----SSCCCEEECCCTTCEECCTTC----EEEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHH
T ss_pred             CcccccccceeecC-----CCceEEEEcccchhhccccCC----cccccccccccccchhccC-CCCCchhhcccHHHHH
Confidence            69999999999972     134589999999999765432    1345689999999999864 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|..||.+.+..+.+..|......++...+                           +.+|+++++||.+||+.||
T Consensus       194 y~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~---------------------------~~~s~~~~~li~~~L~~dp  246 (321)
T d1tkia_         194 YVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF---------------------------KEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH---------------------------TTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhc---------------------------cCCCHHHHHHHHHHccCCh
Confidence            9999999999999988888888765433333222                           3568999999999999999


Q ss_pred             CCCCCHHHHhcCCcccc
Q psy7274         166 HKRIGVEDALAHPYLEQ  182 (308)
Q Consensus       166 ~~R~t~~eil~hp~f~~  182 (308)
                      .+|||++|+|+||||++
T Consensus       247 ~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         247 KSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             GGSCCHHHHHHSHHHHS
T ss_pred             hHCcCHHHHhcCHhhcc
Confidence            99999999999999975

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=227.20  Aligned_cols=139  Identities=19%  Similarity=0.249  Sum_probs=104.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCC--CCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .++.+||+|||+|+....... ....++.+||+.|+|||++.+.  ..|+.++||||+||
T Consensus       126 vHrDlKp~NiLl~-------~~~~~Kl~DFGla~~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv  197 (276)
T d1uwha_         126 IHRDLKSNNIFLH-------EDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI  197 (276)
T ss_dssp             CCSCCCGGGEEEE-------TTSSEEECCCCCSCC-------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHH
T ss_pred             eccccCHHHEEEc-------CCCCEEEccccceeeccccCC-cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHH
Confidence            6999999999999       899999999999987653322 1224567899999999998642  34899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          84 ILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        84 il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      ++|||++|+.||.+.+...++..+......+                         ........++++++.+||.+||..
T Consensus       198 ~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~-------------------------p~~~~~~~~~~~~l~~li~~cl~~  252 (276)
T d1uwha_         198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLS-------------------------PDLSKVRSNCPKAMKRLMAECLKK  252 (276)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHHTSCC-------------------------CCGGGSCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcCCCC-------------------------CcchhccccchHHHHHHHHHHcCC
Confidence            9999999999999877666555444321111                         011223346789999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||++|||+++++++
T Consensus       253 dp~~RPt~~~il~~  266 (276)
T d1uwha_         253 KRDERPLFPQILAS  266 (276)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999876

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=232.55  Aligned_cols=142  Identities=23%  Similarity=0.364  Sum_probs=109.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCC-CCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSK-GYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       .++.+||+|||+|+......  ........||+.|+|||.+.+.. .++.++||||+||+
T Consensus       151 vHrDiKp~Nill~-------~~~~vkL~DFG~a~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~i  221 (322)
T d1vzoa_         151 IYRDIKLENILLD-------SNGHVVLTDFGLSKEFVADE--TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL  221 (322)
T ss_dssp             CCCCCCGGGEEEC-------TTSCEEESCSSEEEECCGGG--GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHH
T ss_pred             EeccCCccceeec-------CCCCEEEeeccchhhhcccc--cccccccccccccchhHHhhcCCcCCCchhhhHHHHHH
Confidence            6999999999999       88999999999998765432  22235568999999999987543 47889999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          85 LAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        85 l~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +|+|++|+.||.+.+..+....+.....                   ...+        ......++++++||.+||+.|
T Consensus       222 LyelltG~~PF~~~~~~~~~~~i~~~~~-------------------~~~~--------~~~~~~s~~~~~li~~~l~~d  274 (322)
T d1vzoa_         222 MYELLTGASPFTVDGEKNSQAEISRRIL-------------------KSEP--------PYPQEMSALAKDLIQRLLMKD  274 (322)
T ss_dssp             HHHHHHSSCTTSCTTSCCCHHHHHHHHH-------------------HCCC--------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcc-------------------cCCC--------CCcccCCHHHHHHHHHHcccC
Confidence            9999999999988765444444332110                   0000        012357899999999999999


Q ss_pred             CCCCC-----CHHHHhcCCccccc
Q psy7274         165 PHKRI-----GVEDALAHPYLEQY  183 (308)
Q Consensus       165 P~~R~-----t~~eil~hp~f~~~  183 (308)
                      |.+|+     |++|+++||||+.+
T Consensus       275 P~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         275 PKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             GGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHcCCCCcccHHHHHcCHhhcCC
Confidence            99999     58999999999763

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=231.94  Aligned_cols=134  Identities=21%  Similarity=0.241  Sum_probs=106.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........ ...++.+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       186 iHRDlKp~Nill~-------~~~~~Kl~DFGla~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil  256 (325)
T d1rjba_         186 VHRDLAARNVLVT-------HGKVVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILL  256 (325)
T ss_dssp             EETTCSGGGEEEE-------TTTEEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             eeccCchhccccc-------cCCeEEEeeccccccccCCCce-eeeccccCCCccCChHHHcC-CCCCcceeccchhHHH
Confidence            6999999999999       8999999999999876543321 12345678999999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |++||.+.+....+..++..-..+                             .....+++++.+||.+||+.|
T Consensus       257 ~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~-----------------------------~~p~~~~~~l~~li~~cl~~d  307 (325)
T d1rjba_         257 WEIFSLGVNPYPGIPVDANFYKLIQNGFKM-----------------------------DQPFYATEEIYIIMQSCWAFD  307 (325)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-----------------------------CCCCcCCHHHHHHHHHHcCCC
Confidence            99997 899999877655555544321110                             012356899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||++|+++|
T Consensus       308 P~~RPt~~ei~~~  320 (325)
T d1rjba_         308 SRKRPSFPNLTSF  320 (325)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.9e-31  Score=226.59  Aligned_cols=134  Identities=22%  Similarity=0.302  Sum_probs=99.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++.+||+|||+|+......... ..+..+||+.|+|||++.+ ..++.++||||+||++
T Consensus       156 vHrDlKp~NILl~-------~~~~~Kl~DFGla~~~~~~~~~~-~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gvil  226 (299)
T d1ywna1         156 IHRDLAARNILLS-------EKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLL  226 (299)
T ss_dssp             CCSCCCGGGEEEC-------GGGCEEECC------CCSCTTSC-CTTSCCCGGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             cCCcCCccceeEC-------CCCcEEEccCcchhhcccccccc-ccCceeeCccccchhHhhc-CCCCcccceeehHHHH
Confidence            6999999999999       88999999999998765433222 2356689999999999876 4599999999999999


Q ss_pred             HHHhhC-CCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISN-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g-~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++| .+||.+.+..+.+..+...-..+                             ......++++.+||.+||+.|
T Consensus       227 ~ellt~~~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~cl~~d  277 (299)
T d1ywna1         227 WEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----------------------------RAPDYTTPEMYQTMLDCWHGE  277 (299)
T ss_dssp             HHHHTTSCCSSTTCCCSHHHHHHHHHTCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-----------------------------CCCccCCHHHHHHHHHHcCCC
Confidence            999986 57888776554444333211100                             112346889999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||++|+++|
T Consensus       278 P~~Rpt~~eil~~  290 (299)
T d1ywna1         278 PSQRPTFSELVEH  290 (299)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-31  Score=224.86  Aligned_cols=137  Identities=20%  Similarity=0.280  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++.+||+|||+|+........  ..+...||..|+|||++.+ ..++.++||||+||++
T Consensus       131 vHrDiKp~NIll~-------~~~~~Kl~DFGla~~~~~~~~~--~~~~~~gt~~y~APE~~~~-~~~~~~sDvwS~Gvvl  200 (272)
T d1qpca_         131 IHRDLRAANILVS-------DTLSCKIADFGLARLIEDNEYT--AREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILL  200 (272)
T ss_dssp             ECSCCSGGGEEEC-------TTSCEEECCCTTCEECSSSCEE--CCTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             ccCccchhheeee-------cccceeeccccceEEccCCccc--cccccCCcccccChHHHhC-CCCCchhhhhhhHHHH
Confidence            5999999999999       8999999999999987543221  1345678999999999875 4599999999999999


Q ss_pred             HHHhhC-CCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISN-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g-~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++| .++|.+.+..+.+..+......+                              ....+++++.+||.+||+.|
T Consensus       201 ~ellt~~~~~~~~~~~~~~~~~i~~~~~~~------------------------------~p~~~~~~l~~li~~cl~~~  250 (272)
T d1qpca_         201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMV------------------------------RPDNCPEELYQLMRLCWKER  250 (272)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCC------------------------------CcccChHHHHHHHHHHcCCC
Confidence            999995 56677777666655554321111                              11356789999999999999


Q ss_pred             CCCCCCHHHHhc--CCcccc
Q psy7274         165 PHKRIGVEDALA--HPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~--hp~f~~  182 (308)
                      |++|||++++++  |+||..
T Consensus       251 P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         251 PEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhhhhhc
Confidence            999999999998  788853

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-31  Score=225.11  Aligned_cols=137  Identities=18%  Similarity=0.222  Sum_probs=106.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+................||+.|+|||++.+ ..++.++||||+||++
T Consensus       129 iHrDlKp~Nill~-------~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gv~l  200 (277)
T d1xbba_         129 VHRDLAARNVLLV-------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLM  200 (277)
T ss_dssp             ECSCCSGGGEEEE-------ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             ccCCCcchhhccc-------ccCcccccchhhhhhccccccccccccccCCCceecCchhhcC-CCCCchhhhccchhhh
Confidence            5999999999999       8999999999999977544332222345678999999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+.+..+....+......                              .....+++++.+||.+||+.|
T Consensus       201 ~ellt~g~~Pf~~~~~~~~~~~i~~~~~~------------------------------~~p~~~~~~~~~li~~cl~~d  250 (277)
T d1xbba_         201 WEAFSYGQKPYRGMKGSEVTAMLEKGERM------------------------------GCPAGCPREMYDLMNLCWTYD  250 (277)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             hHHhhCCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCcccCHHHHHHHHHHcCCC
Confidence            99997 89999998876655555321110                              012356899999999999999


Q ss_pred             CCCCCCHHHH---hcCCcc
Q psy7274         165 PHKRIGVEDA---LAHPYL  180 (308)
Q Consensus       165 P~~R~t~~ei---l~hp~f  180 (308)
                      |++|||++++   |+|+|+
T Consensus       251 p~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         251 VENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             TTTSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhCHHh
Confidence            9999999988   456665

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=3e-30  Score=227.48  Aligned_cols=168  Identities=26%  Similarity=0.392  Sum_probs=117.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+.. ......+.+||+|||.|......      ....+||+.|+|||++.+ ..|+.++|+||+||++
T Consensus       148 vHrDlKp~NIll~~~-~~~~~~~~~kl~dfg~s~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il  219 (362)
T d1q8ya_         148 IHTDIKPENVLMEIV-DSPENLIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLG-APWGCGADIWSTACLI  219 (362)
T ss_dssp             ECSCCSGGGEEEEEE-ETTTTEEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHH
T ss_pred             ccccCChhHeeeecc-CcccccceeeEeecccccccccc------cccccccccccChhhccc-cCCCccccccchHHHH
Confidence            699999999999711 01111234899999999876432      244589999999999875 5699999999999999


Q ss_pred             HHHhhCCCCCCCCC------HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhc------CCCCCCCCcc-------ccC
Q psy7274          86 AEMISNRPIFPGKH------YLDQLNHILGILGSPTPEDLSCIINEKARSYLQS------LPFKPKVPWE-------ILY  146 (308)
Q Consensus        86 ~ell~g~~pf~~~~------~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------~~~  146 (308)
                      ++|++|+.||.+.+      ..+.+..+...+|.++...+......  ..+...      .......++.       ...
T Consensus       220 ~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (362)
T d1q8ya_         220 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT--RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS  297 (362)
T ss_dssp             HHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTH--HHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC
T ss_pred             HHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccc--ccccccchhhhccccccCCchhhhcccccccC
Confidence            99999999997543      35667777888898877655432211  111111      1111111110       011


Q ss_pred             CCCChhHHHHHHHhcccCCCCCCCHHHHhcCCccccc
Q psy7274         147 PNADPNALDLLGKMLTFNPHKRIGVEDALAHPYLEQY  183 (308)
Q Consensus       147 ~~~s~~~~~ll~~~L~~dP~~R~t~~eil~hp~f~~~  183 (308)
                      ...++++++||.+||++||.+||||+|+|+||||++.
T Consensus       298 ~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         298 KDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             HHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            2346789999999999999999999999999999854

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=3.1e-30  Score=221.25  Aligned_cols=134  Identities=17%  Similarity=0.227  Sum_probs=96.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCC--CccCcccccccchhhHhhCCCCCCchhhHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC   83 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~   83 (308)
                      .||||||+|||++       .++.+||+|||+|+..........  ......||..|+|||++.+ ..|+.++||||+||
T Consensus       150 iHrDlKp~NILl~-------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDvwS~Gv  221 (299)
T d1jpaa_         150 VHRDLAARNILVN-------SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGI  221 (299)
T ss_dssp             CCSCCCGGGEEEC-------TTCCEEECCC-----------------------CGGGSCHHHHHS-CCCCHHHHHHHHHH
T ss_pred             ccCccccceEEEC-------CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhc-CCCCcccccccchH
Confidence            6999999999999       899999999999987654322111  1233567899999999875 45999999999999


Q ss_pred             HHHHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcc
Q psy7274          84 ILAEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLT  162 (308)
Q Consensus        84 il~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~  162 (308)
                      ++|||++ |+.||.+.+..+.+..+......+.                              ...++.++.+||.+||+
T Consensus       222 vl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------------~~~~~~~l~~li~~cl~  271 (299)
T d1jpaa_         222 VMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP------------------------------PMDCPSALHQLMLDCWQ  271 (299)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC------------------------------CTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------------CccchHHHHHHHHHHcC
Confidence            9999998 8999999887776666543221111                              12467899999999999


Q ss_pred             cCCCCCCCHHHHhcC
Q psy7274         163 FNPHKRIGVEDALAH  177 (308)
Q Consensus       163 ~dP~~R~t~~eil~h  177 (308)
                      .||.+|||+.|++++
T Consensus       272 ~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         272 KDRNHRPKFGQIVNT  286 (299)
T ss_dssp             SSTTTSCCHHHHHHH
T ss_pred             CCHhHCcCHHHHHHH
Confidence            999999999998754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.6e-31  Score=223.37  Aligned_cols=138  Identities=16%  Similarity=0.197  Sum_probs=110.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+............+..+||..|+|||++.++ .++.++||||+||++
T Consensus       131 iHrDlKp~Nill~-------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwS~Gv~l  202 (285)
T d1u59a_         131 VHRDLAARNVLLV-------NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR-KFSSRSDVWSYGVTM  202 (285)
T ss_dssp             ECCCCSGGGEEEE-------ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHC-EECHHHHHHHHHHHH
T ss_pred             ecCcCchhheeec-------cCCceeeccchhhhcccccccccccccccccCccccChHHHhCC-CCCccchhhcchHHH
Confidence            6999999999999       88999999999999876543332333456789999999998754 599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+.+..+.+..+......                              ...+.+++++.+||.+||..|
T Consensus       203 ~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~------------------------------~~p~~~~~~l~~li~~cl~~~  252 (285)
T d1u59a_         203 WEALSYGQKPYKKMKGPEVMAFIEQGKRM------------------------------ECPPECPPELYALMSDCWIYK  252 (285)
T ss_dssp             HHHHTTSCCTTTTCCTHHHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHTTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCcCCHHHHHHHHHHcCCC
Confidence            99998 89999988776666555421110                              112457899999999999999


Q ss_pred             CCCCCCHHHH---hcCCccc
Q psy7274         165 PHKRIGVEDA---LAHPYLE  181 (308)
Q Consensus       165 P~~R~t~~ei---l~hp~f~  181 (308)
                      |++|||+.++   |+|+|+.
T Consensus       253 p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         253 WEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHHHH
Confidence            9999998877   6677774

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-30  Score=219.27  Aligned_cols=132  Identities=16%  Similarity=0.255  Sum_probs=95.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.........  .....||..|+|||++.+ ..|+.++||||+||++
T Consensus       123 iHrDlKp~Nill~-------~~~~~Kl~DFGla~~~~~~~~~~--~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvil  192 (263)
T d1sm2a_         123 IHRDLAARNCLVG-------ENQVIKVSDFGMTRFVLDDQYTS--STGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLM  192 (263)
T ss_dssp             CCTTCSGGGEEEC-------GGGCEEECSCC--------------------CTTSCCHHHHTT-CCCCHHHHHHHHHHHH
T ss_pred             eecccchhheeec-------CCCCeEecccchheeccCCCcee--ecceecCcccCChHHhcC-CCCCchhhhcchHHHH
Confidence            6999999999999       88999999999998765432221  244678999999999865 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |.++|.+.+..+.+..+......+.                              ....++++.+||.+||+.|
T Consensus       193 ~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~------------------------------p~~~~~~l~~li~~cl~~~  242 (263)
T d1sm2a_         193 WEVFSEGKIPYENRSNSEVVEDISTGFRLYK------------------------------PRLASTHVYQIMNHCWKER  242 (263)
T ss_dssp             HHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC------------------------------CTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC------------------------------ccccCHHHHHHHHHHccCC
Confidence            99998 5777877777666666544221111                              1235789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||++++++|
T Consensus       243 p~~Rps~~~il~~  255 (263)
T d1sm2a_         243 PEDRPAFSRLLRQ  255 (263)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999976

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.6e-30  Score=219.30  Aligned_cols=133  Identities=17%  Similarity=0.247  Sum_probs=94.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++.+||+|||+|+................||..|+|||++.+ ..++.++||||+||++
T Consensus       132 iHrDlKp~NILl~-------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~sDI~S~Gvil  203 (283)
T d1mqba_         132 VHRDLAARNILVN-------SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVM  203 (283)
T ss_dssp             CCSCCCGGGEEEC-------TTCCEEECCCCC-----------------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHH
T ss_pred             ccCccccceEEEC-------CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHcc-CCCCCcccccccHHHH
Confidence            6999999999999       8999999999999876543322222344578999999999875 5599999999999999


Q ss_pred             HHHhhCC-CCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~-~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++|. +++.+.+..+.+..+......+                              ....++..+.+||.+||..|
T Consensus       204 ~el~t~~~~~~~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~cl~~~  253 (283)
T d1mqba_         204 WEVMTYGERPYWELSNHEVMKAINDGFRLP------------------------------TPMDCPSAIYQLMMQCWQQE  253 (283)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHHHTTCCCC------------------------------CCTTCBHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCccccCCHHHHHHHHhccCCCC------------------------------CchhhHHHHHHHHHHHCcCC
Confidence            9999964 5566555555544443221111                              11246788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.|+++
T Consensus       254 p~~RPt~~eil~  265 (283)
T d1mqba_         254 RARRPKFADIVS  265 (283)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999975

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=2.1e-30  Score=220.24  Aligned_cols=140  Identities=18%  Similarity=0.262  Sum_probs=101.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.++|+|||.++...............+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       133 iHrDiKP~NIll~-------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil  204 (277)
T d1o6ya_         133 IHRDVKPANIMIS-------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVL  204 (277)
T ss_dssp             ECCCCSGGGEEEE-------TTSCEEECCCTTCEECC----------------TTCCHHHHTT-CCCCHHHHHHHHHHHH
T ss_pred             cCccccCcccccC-------ccccceeehhhhhhhhccccccccccccccCcccccCHHHHcC-CCCCcceecccchHHH
Confidence            6999999999999       8999999999999876544333333566799999999999865 5699999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccCC
Q psy7274          86 AEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFNP  165 (308)
Q Consensus        86 ~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~dP  165 (308)
                      |+|++|++||.+.+..+.+..+...-..+                           .....+.+|+++.+||.+||+.||
T Consensus       205 yelltG~~Pf~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~s~~l~~li~~~L~~dp  257 (277)
T d1o6ya_         205 YEVLTGEPPFTGDSPVSVAYQHVREDPIP---------------------------PSARHEGLSADLDAVVLKALAKNP  257 (277)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHCCCCC---------------------------GGGTSSSCCHHHHHHHHHHTCSSG
T ss_pred             HHHHhCCCCCCCcCHHHHHHHHHhcCCCC---------------------------CchhccCCCHHHHHHHHHHccCCH
Confidence            99999999999988777766655321111                           122235678999999999999999


Q ss_pred             CCCCCHHHHhcCCcc
Q psy7274         166 HKRIGVEDALAHPYL  180 (308)
Q Consensus       166 ~~R~t~~eil~hp~f  180 (308)
                      .+||+..+.+.|+|.
T Consensus       258 ~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         258 ENRYQTAAEMRADLV  272 (277)
T ss_dssp             GGSCSSHHHHHHHHH
T ss_pred             hHCHhHHHHHHHHHH
Confidence            999954444456665

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-30  Score=219.76  Aligned_cols=132  Identities=21%  Similarity=0.307  Sum_probs=96.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       +++.+||+|||+|+.........  .+..+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       130 iHrDlKp~NIll~-------~~~~~Kl~DfG~a~~~~~~~~~~--~~~~~gt~~y~apE~l~~-~~~~~~~DiwSlGvil  199 (273)
T d1mp8a_         130 VHRDIAARNVLVS-------SNDCVKLGDFGLSRYMEDSTYYK--ASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCM  199 (273)
T ss_dssp             CCSCCSGGGEEEE-------ETTEEEECC---------------------CCGGGCCHHHHHH-CCCSHHHHHHHHHHHH
T ss_pred             eccccchhheeec-------CCCcEEEccchhheeccCCccee--ccceecCcccchhhHhcc-CCCCCccccccchHHH
Confidence            6999999999999       88999999999998765432221  345678999999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |.+||.+.+..+.+..+......                              ...+++++++.+||.+||..|
T Consensus       200 ~e~lt~g~~P~~~~~~~~~~~~i~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~d  249 (273)
T d1mp8a_         200 WEILMHGVKPFQGVKNNDVIGRIENGERL------------------------------PMPPNCPPTLYSLMTKCWAYD  249 (273)
T ss_dssp             HHHHTTSCCTTTTCCGGGHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            99997 89999988877666655432111                              123467899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||++|+++|
T Consensus       250 p~~Rps~~ei~~~  262 (273)
T d1mp8a_         250 PSRRPRFTELKAQ  262 (273)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999876

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7e-30  Score=214.34  Aligned_cols=132  Identities=17%  Similarity=0.254  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........  ......||..|+|||++.+ ..++.++||||+||++
T Consensus       122 iH~dlk~~Nill~-------~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~ksDiwS~G~~l  191 (258)
T d1k2pa_         122 LHRDLAARNCLVN-------DQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLM  191 (258)
T ss_dssp             CCSCCSGGGEEEC-------TTCCEEECCCSSCCBCSSSSCC--CCCCSCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ccccccceeEEEc-------CCCcEEECcchhheeccCCCce--eecccCCCCCcCCcHHhcC-CCCCcceeecccchhh
Confidence            6999999999999       8999999999999876543222  1345689999999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+.+..+....+......+.+                              ...++++.+||.+||+.|
T Consensus       192 ~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p------------------------------~~~~~~l~~li~~cl~~d  241 (258)
T d1k2pa_         192 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRP------------------------------HLASEKVYTIMYSCWHEK  241 (258)
T ss_dssp             HHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCC------------------------------TTCCHHHHHHHHHTTCSS
T ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCc------------------------------ccccHHHHHHHHHHccCC
Confidence            99998 89999999887777666543221111                              245789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||++++++|
T Consensus       242 P~~RPt~~eil~~  254 (258)
T d1k2pa_         242 ADERPTFKILLSN  254 (258)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-30  Score=223.19  Aligned_cols=133  Identities=19%  Similarity=0.248  Sum_probs=103.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........ ......+||..|+|||++.++ .|+.++||||+||++
T Consensus       133 iHrDlKp~NIll~-------~~~~~kl~DFGla~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~-~~~~~sDvwS~Gvil  203 (317)
T d1xkka_         133 VHRDLAARNVLVK-------TPQHVKITDFGLAKLLGAEEKE-YHAEGGKVPIKWMALESILHR-IYTHQSDVWSYGVTV  203 (317)
T ss_dssp             CCSCCCGGGEEEE-------ETTEEEECCCSHHHHTTTTCC---------CCTTTSCHHHHHHC-CCCHHHHHHHHHHHH
T ss_pred             ccCcchhhcceeC-------CCCCeEeeccccceeccccccc-ccccccccCccccChHHHhcC-CCChhhhhhhHHHHH
Confidence            6999999999999       8999999999999987543322 123445789999999998764 599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |.+||.+.+..+....+......+                              ..+.+++++.+||.+||..|
T Consensus       204 ~el~t~g~~p~~~~~~~~~~~~i~~~~~~~------------------------------~p~~~~~~~~~li~~cl~~d  253 (317)
T d1xkka_         204 WELMTFGSKPYDGIPASEISSILEKGERLP------------------------------QPPICTIDVYMIMVKCWMID  253 (317)
T ss_dssp             HHHHTTSCCTTTTSCGGGHHHHHHHTCCCC------------------------------CCTTBCHHHHHHHHHHTCSS
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------CCcccCHHHHHHHHHhCCCC
Confidence            99998 789998877665554443321111                              11346789999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.|+++|
T Consensus       254 P~~RPs~~eil~~  266 (317)
T d1xkka_         254 ADSRPKFRELIIE  266 (317)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999987

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.3e-30  Score=216.50  Aligned_cols=138  Identities=23%  Similarity=0.327  Sum_probs=103.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+||||+       .++.+||+|||+|+........  ..+...||..|+|||++.+ ..++.++||||+||++
T Consensus       135 vH~DlKp~NIll~-------~~~~~kl~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~S~Giil  204 (285)
T d1fmka3         135 VHRDLRAANILVG-------ENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILL  204 (285)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCCTTC----------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             ecccccceEEEEC-------CCCcEEEcccchhhhccCCCce--eeccccccccccChHHHhC-CCCCcHHhhhcchHHH
Confidence            7999999999999       8899999999999876433221  1345679999999999876 4599999999999999


Q ss_pred             HHHhhC-CCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISN-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g-~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++| .+++.+....+.+..+......+                              ..+.+++++.+||.+||+.|
T Consensus       205 ~el~t~~~p~~~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~~~l~~li~~cl~~d  254 (285)
T d1fmka3         205 TELTTKGRVPYPGMVNREVLDQVERGYRMP------------------------------CPPECPESLHDLMCQCWRKE  254 (285)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCCC------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCC------------------------------CCcccCHHHHHHHHHHcccC
Confidence            999995 56667777666666654322111                              12356899999999999999


Q ss_pred             CCCCCCHHHHhc--CCccccc
Q psy7274         165 PHKRIGVEDALA--HPYLEQY  183 (308)
Q Consensus       165 P~~R~t~~eil~--hp~f~~~  183 (308)
                      |++|||++++++  |+||...
T Consensus       255 P~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         255 PEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             GGGSCCHHHHHHHHHTTTSCS
T ss_pred             HhHCcCHHHHHHHHhhhhcCC
Confidence            999999999987  8888653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.1e-29  Score=216.49  Aligned_cols=131  Identities=16%  Similarity=0.245  Sum_probs=100.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........  ..+...||..|+|||++.+ ..|+.++||||+||++
T Consensus       137 iHrDlKp~NILl~-------~~~~~Kl~DFG~a~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~k~DiwS~Gv~l  206 (287)
T d1opja_         137 IHRDLAARNCLVG-------ENHLVKVADFGLSRLMTGDTYT--AHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLL  206 (287)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCCCTTTCCSSSSE--EETTEEECGGGCCHHHHHH-CCCSHHHHHHHHHHHH
T ss_pred             ccCccccCeEEEC-------CCCcEEEccccceeecCCCCce--eeccccccccccChHHHcC-CCCCchhhhhhHHHHH
Confidence            6999999999999       8899999999999976543221  1344568899999999876 4599999999999999


Q ss_pred             HHHhhCCC-CCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNRP-IFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~~-pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++|.. +|.+.+.......+......                              .....+++++.+||.+||+.|
T Consensus       207 ~ell~~~~p~~~~~~~~~~~~~i~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~d  256 (287)
T d1opja_         207 WEIATYGMSPYPGIDLSQVYELLEKDYRM------------------------------ERPEGCPEKVYELMRACWQWN  256 (287)
T ss_dssp             HHHHTTSCCSSTTCCHHHHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCcchHHHHHHHHhcCCCC------------------------------CCCccchHHHHHHHHHHcCCC
Confidence            99999665 45555544433333211100                              112357899999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       257 P~~Rps~~ei~~  268 (287)
T d1opja_         257 PSDRPSFAEIHQ  268 (287)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999975

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2.8e-29  Score=215.62  Aligned_cols=132  Identities=17%  Similarity=0.165  Sum_probs=104.1

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+........ ...++.+||..|+|||++.+ ..|+.++||||+||++
T Consensus       162 vHrDlKp~NILld-------~~~~~Kl~DFGls~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl  232 (301)
T d1lufa_         162 VHRDLATRNCLVG-------ENMVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVL  232 (301)
T ss_dssp             CCSCCSGGGEEEC-------GGGCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             EeeEEcccceEEC-------CCCcEEEccchhheeccCCccc-cccCCCCcCcCcCCHHHHcc-CCCChhhhhccchhhH
Confidence            5999999999999       8899999999999876443221 12345688999999999875 5599999999999999


Q ss_pred             HHHhhCC-CCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~-~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++|. +||.+.+..+.+..+......                              .....+++++.+||.+||+.|
T Consensus       233 ~ell~~~~~p~~~~~~~e~~~~v~~~~~~------------------------------~~p~~~~~~~~~li~~cl~~~  282 (301)
T d1lufa_         233 WEIFSYGLQPYYGMAHEEVIYYVRDGNIL------------------------------ACPENCPLELYNLMRLCWSKL  282 (301)
T ss_dssp             HHHHTTTCCTTTTSCHHHHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHccCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCccchHHHHHHHHHHcCCC
Confidence            9999985 789888877776665432110                              112356889999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |++|||+.|+++
T Consensus       283 P~~RPt~~ev~~  294 (301)
T d1lufa_         283 PADRPSFCSIHR  294 (301)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-29  Score=212.08  Aligned_cols=133  Identities=18%  Similarity=0.201  Sum_probs=105.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+............+...||..|+|||++.+ ..++.++||||+||++
T Consensus       133 iHrDikp~NIll~-------~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~S~Gvil  204 (273)
T d1u46a_         133 IHRDLAARNLLLA-------TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTL  204 (273)
T ss_dssp             ECSCCCGGGEEEE-------ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHH
T ss_pred             eeeeecHHHhccc-------cccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhC-CCCCcchhhhhhHHHH
Confidence            6999999999999       8899999999999987654433322345578889999999876 5599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |+.||.+.+..+.+..+......+                             ...+.++.++.+||.+||..|
T Consensus       205 ~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------~~~~~~~~~l~~li~~cl~~d  255 (273)
T d1u46a_         205 WEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------------------------PRPEDCPQDIYNVMVQCWAHK  255 (273)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHHHTSCCCC-----------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCcCHHHHHHHHHhCCCCC-----------------------------CCcccccHHHHHHHHHHcCCC
Confidence            99998 899999998888776664321111                             112356899999999999999


Q ss_pred             CCCCCCHHHHh
Q psy7274         165 PHKRIGVEDAL  175 (308)
Q Consensus       165 P~~R~t~~eil  175 (308)
                      |++|||+++++
T Consensus       256 p~~RPt~~ei~  266 (273)
T d1u46a_         256 PEDRPTFVALR  266 (273)
T ss_dssp             GGGSCCHHHHH
T ss_pred             hhHCcCHHHHH
Confidence            99999999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.6e-28  Score=209.36  Aligned_cols=132  Identities=20%  Similarity=0.246  Sum_probs=105.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++......... .....+||+.|+|||++.+ ..|+.++||||+||++
T Consensus       157 vHrDiKp~NiLl~-------~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl  227 (299)
T d1fgka_         157 IHRDLAARNVLVT-------EDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLL  227 (299)
T ss_dssp             CCSCCSGGGEEEC-------TTCCEEECSTTCCCCGGGCCTTC-CCTTSCCGGGGSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             Eeeeecccceeec-------CCCCeEeccchhhcccccccccc-ccccCCCChhhhhhhHhcC-CCCCchhhhHHhHHHH
Confidence            6999999999999       89999999999999775443222 2355689999999999876 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |.+||.+.+....+..+......                              .....+++++.+||.+||+.|
T Consensus       228 ~ell~~g~~p~~~~~~~~~~~~i~~~~~~------------------------------~~p~~~~~~l~~li~~cl~~d  277 (299)
T d1fgka_         228 WEIFTLGGSPYPGVPVEELFKLLKEGHRM------------------------------DKPSNCTNELYMMMRDCWHAV  277 (299)
T ss_dssp             HHHHTTSCCSSTTCCHHHHHHHHHTTCCC------------------------------CCCSSCCHHHHHHHHHHTCSS
T ss_pred             HHhccCCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCccchHHHHHHHHHHccCC
Confidence            99997 78999888766555444321110                              112356899999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||+.|+++
T Consensus       278 P~~Rps~~eil~  289 (299)
T d1fgka_         278 PSQRPTFKQLVE  289 (299)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-28  Score=210.06  Aligned_cols=138  Identities=17%  Similarity=0.223  Sum_probs=109.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++++||+|||+|+....... ....+..+||+.|+|||.+.+ ..++.++||||+||++
T Consensus       155 vHrDlk~~NiLld-------~~~~~Kl~DFGla~~~~~~~~-~~~~~~~~~t~~y~aPe~l~~-~~~~~~~Dv~S~G~il  225 (308)
T d1p4oa_         155 VHRDLAARNCMVA-------EDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVL  225 (308)
T ss_dssp             BCSCCSGGGEEEC-------TTCCEEECCTTCCCGGGGGGC-EEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             eeceEcCCceeec-------CCceEEEeecccceeccCCcc-eeeccceecccccCCHHHHcc-CCCCcccccccHHHHH
Confidence            6999999999999       999999999999987643321 112345578999999999876 4589999999999999


Q ss_pred             HHHhhC-CCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISN-RPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g-~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      +||++| .+||.+.+..+.+..+......+                              ..+.+++.+.+||.+||+.|
T Consensus       226 ~El~t~~~~p~~~~~~~~~~~~i~~~~~~~------------------------------~p~~~~~~l~~li~~cl~~~  275 (308)
T d1p4oa_         226 WEIATLAEQPYQGLSNEQVLRFVMEGGLLD------------------------------KPDNCPDMLFELMRMCWQYN  275 (308)
T ss_dssp             HHHHHTSCCTTTTSCHHHHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhCCCCC------------------------------CcccchHHHHHHHHHHcCCC
Confidence            999998 58898888777776664321110                              12356789999999999999


Q ss_pred             CCCCCCHHHHhc------CCcccc
Q psy7274         165 PHKRIGVEDALA------HPYLEQ  182 (308)
Q Consensus       165 P~~R~t~~eil~------hp~f~~  182 (308)
                      |.+|||++++++      +|+|++
T Consensus       276 P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         276 PKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             GGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             hhHCcCHHHHHHHHHHhcCCCCcC
Confidence            999999999987      566643

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=5.1e-28  Score=207.64  Aligned_cols=159  Identities=16%  Similarity=0.138  Sum_probs=108.4

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC----CCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++    ..+.+..+||+|||+|+.........    ...+..+||+.|+|||++.+ ..++.++||||+
T Consensus       125 iHrDiKp~NIl~~----~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSl  199 (299)
T d1ckia_         125 IHRDVKPDNFLMG----LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESL  199 (299)
T ss_dssp             ECSCCCGGGEEEC----CGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT-BCCCHHHHHHHH
T ss_pred             eeccCCHhhcccc----ccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhC-CCCCChhhEEec
Confidence            6999999999876    11245679999999999765432211    12356689999999999865 569999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhc
Q psy7274          82 GCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKML  161 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L  161 (308)
                      ||+++||++|+.||.+.........+......            ..           ..+.....+++++++.+||.+||
T Consensus       200 G~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~------------~~-----------~~~~~~~~~~~p~~~~~li~~cl  256 (299)
T d1ckia_         200 GYVLMYFNLGSLPWQGLKAATKRQKYERISEK------------KM-----------STPIEVLCKGYPSEFATYLNFCR  256 (299)
T ss_dssp             HHHHHHHHHSSCTTCCCC-------HHHHHHH------------HH-----------HSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             CHHHHHHHhCCCcccccchHHHHHHHHHhhcc------------cC-----------CCChhHhccCCCHHHHHHHHHHc
Confidence            99999999999999886654444333221100            00           00112223467899999999999


Q ss_pred             ccCCCCCCCHH---HHhcCCccccccCCCCCCchh
Q psy7274         162 TFNPHKRIGVE---DALAHPYLEQYYDPADEPVSW  193 (308)
Q Consensus       162 ~~dP~~R~t~~---eil~hp~f~~~~~~~~~~~~~  193 (308)
                      ..||.+||+++   ++|+|+|.+.... .+.+.+|
T Consensus       257 ~~~p~~RP~~~~i~~~l~~~~~~~~~~-~~~~~Dw  290 (299)
T d1ckia_         257 SLRFDDKPDYSYLRQLFRNLFHRQGFS-YDYVFDW  290 (299)
T ss_dssp             HSCTTCCCCHHHHHHHHHHHHHHHTCC-CSCCCHH
T ss_pred             cCChhHCcCHHHHHHHHHHHHHHcCCC-CCCCcCc
Confidence            99999999986   5577876644322 3344444

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.4e-28  Score=201.96  Aligned_cols=128  Identities=17%  Similarity=0.262  Sum_probs=96.6

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++.....      .....+|..|+|||++.+. .++.++||||+||++
T Consensus       125 vH~dlkp~Nil~~-------~~~~~kl~dfg~s~~~~~~------~~~~~~~~~y~aPE~l~~~-~~t~~sDIwSfG~il  190 (262)
T d1byga_         125 VHRDLAARNVLVS-------EDNVAKVSDFGLTKEASST------QDTGKLPVKWTAPEALREK-KFSTKSDVWSFGILL  190 (262)
T ss_dssp             CCSCCSGGGEEEC-------TTSCEEECCCCC------------------CCTTTSCHHHHHHC-CCCHHHHHHHHHHHH
T ss_pred             eccccchHhheec-------CCCCEeecccccceecCCC------CccccccccCCChHHHhCC-CCChHHHHHhHHHHH
Confidence            7999999999999       8999999999999876433      2334788999999998764 599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |++||.+.+..+....+.+...                              ....+..++++.+||.+||..|
T Consensus       191 ~el~t~~~~p~~~~~~~~~~~~i~~~~~------------------------------~~~~~~~~~~~~~li~~cl~~d  240 (262)
T d1byga_         191 WEIYSFGRVPYPRIPLKDVVPRVEKGYK------------------------------MDAPDGCPPAVYEVMKNCWHLD  240 (262)
T ss_dssp             HHHHTTSCCSCTTSCGGGHHHHHTTTCC------------------------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCC------------------------------CCCCccCCHHHHHHHHHHcccC
Confidence            99998 7888887766555544422110                              0122356799999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |.+|||+.+++++
T Consensus       241 P~~Rps~~~l~~~  253 (262)
T d1byga_         241 AAMRPSFLQLREQ  253 (262)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999763

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-27  Score=205.14  Aligned_cols=133  Identities=23%  Similarity=0.295  Sum_probs=105.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+++........ ...+..+||+.|+|||++.+ ..++.++||||+||++
T Consensus       167 vHrDLKp~NIl~~-------~~~~~ki~DfG~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l  237 (311)
T d1t46a_         167 IHRDLAARNILLT-------HGRITKICDFGLARDIKNDSNY-VVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFL  237 (311)
T ss_dssp             CCSCCSGGGEEEE-------TTTEEEECCCGGGSCTTSCTTS-EECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             eeccccccccccc-------ccCcccccccchheeccCCCcc-eEeeecccChHHcCHHHhcC-CCCCCcccccchHHHH
Confidence            6999999999999       8999999999999976543322 22355789999999999875 4599999999999999


Q ss_pred             HHHhh-CCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMIS-NRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~-g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++ |.++|.+.+..+.+..++..-..+                             ......++.+.+||.+||+.|
T Consensus       238 ~ellt~g~p~~~~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~~~~l~~Li~~cl~~d  288 (311)
T d1t46a_         238 WELFSLGSSPYPGMPVDSKFYKMIKEGFRM-----------------------------LSPEHAPAEMYDIMKTCWDAD  288 (311)
T ss_dssp             HHHHTTTCCSSTTCCSSHHHHHHHHHTCCC-----------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-----------------------------CCcccccHHHHHHHHHHcCCC
Confidence            99998 677787777666555544321110                             011246789999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy7274         165 PHKRIGVEDALA  176 (308)
Q Consensus       165 P~~R~t~~eil~  176 (308)
                      |.+|||++++++
T Consensus       289 P~~RPs~~~il~  300 (311)
T d1t46a_         289 PLKRPTFKQIVQ  300 (311)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999985

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.2e-28  Score=208.99  Aligned_cols=130  Identities=22%  Similarity=0.225  Sum_probs=102.2

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccchhhHhhCCCCCCchhhHHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL   85 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~il   85 (308)
                      .||||||+|||++       .++.+||+|||+|+.......    .....||..|+|||.+.+ ..|+.++||||+||++
T Consensus       149 iHrDlkp~NIL~~-------~~~~~kl~DfG~a~~~~~~~~----~~~~~gt~~y~aPE~l~~-~~~~~~sDvwSfGvil  216 (309)
T d1fvra_         149 IHRDLAARNILVG-------ENYVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLL  216 (309)
T ss_dssp             ECSCCSGGGEEEC-------GGGCEEECCTTCEESSCEECC----C----CCTTTCCHHHHHH-CEECHHHHHHHHHHHH
T ss_pred             cccccccceEEEc-------CCCceEEcccccccccccccc----ccceecCCcccchHHhcc-CCCCccceeehhHHHH
Confidence            6999999999999       889999999999986543322    234478999999999875 4599999999999999


Q ss_pred             HHHhhCC-CCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhcccC
Q psy7274          86 AEMISNR-PIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTFN  164 (308)
Q Consensus        86 ~ell~g~-~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~d  164 (308)
                      |||++|. +||.+.+..+.+..+......                              .....+++++.+||.+||+.|
T Consensus       217 ~ell~~~~~p~~~~~~~~~~~~i~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~d  266 (309)
T d1fvra_         217 WEIVSLGGTPYCGMTCAELYEKLPQGYRL------------------------------EKPLNCDDEVYDLMRQCWREK  266 (309)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHGGGTCCC------------------------------CCCTTBCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHhcCCC------------------------------CCCccCCHHHHHHHHHHcCCC
Confidence            9999965 678888776665554321100                              112356799999999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy7274         165 PHKRIGVEDALAH  177 (308)
Q Consensus       165 P~~R~t~~eil~h  177 (308)
                      |++|||++++++|
T Consensus       267 P~~RPs~~eil~~  279 (309)
T d1fvra_         267 PYERPSFAQILVS  279 (309)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999976

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.1e-27  Score=204.49  Aligned_cols=134  Identities=16%  Similarity=0.158  Sum_probs=99.8

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCCCCCchhhHHHHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI   84 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSlG~i   84 (308)
                      .||||||+|||++       +++.+||+|||+++......... ...+...||..|+|||++.++ .++.++||||+||+
T Consensus       152 iHrDLK~~NILl~-------~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDI~SfGiv  223 (311)
T d1r0pa_         152 VHRDLAARNCMLD-------EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVL  223 (311)
T ss_dssp             CCSCCSGGGEEEC-------TTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHC-CCCHHHHHHHHHHH
T ss_pred             ccCCccHHhEeEC-------CCCCEEEecccchhhccccccccceecccccccccccChHHHhcC-CCCChhHhhhhHHH
Confidence            6999999999999       89999999999999765432221 123456789999999998764 59999999999999


Q ss_pred             HHHHhhCCCCCCCCC-HHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHHhccc
Q psy7274          85 LAEMISNRPIFPGKH-YLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGKMLTF  163 (308)
Q Consensus        85 l~ell~g~~pf~~~~-~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~~L~~  163 (308)
                      +|||++|..||.... ..+....+...  .                       ..     ...+.+++++.+||.+||..
T Consensus       224 l~El~t~~~p~~~~~~~~~~~~~i~~g--~-----------------------~~-----~~p~~~~~~l~~li~~cl~~  273 (311)
T d1r0pa_         224 LWELMTRGAPPYPDVNTFDITVYLLQG--R-----------------------RL-----LQPEYCPDPLYEVMLKCWHP  273 (311)
T ss_dssp             HHHHHTTSCCSCC------CHHHHHTT--C-----------------------CC-----CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHcC--C-----------------------CC-----CCcccCcHHHHHHHHHHcCC
Confidence            999999776665433 22222222211  0                       00     01134678999999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy7274         164 NPHKRIGVEDALAH  177 (308)
Q Consensus       164 dP~~R~t~~eil~h  177 (308)
                      ||.+|||+.|+++|
T Consensus       274 dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         274 KAEMRPSFSELVSR  287 (311)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.9e-28  Score=206.92  Aligned_cols=155  Identities=19%  Similarity=0.175  Sum_probs=96.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCC-CCccCcccccccchhhHhhCCC-----CCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHT-GFLTEYVATRWYRAPEIMLNSK-----GYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiW   79 (308)
                      .||||||+||||+       .++.+||+|||+|+......... ......+||+.|+|||++.+..     .++.++|||
T Consensus       130 vHrDlKp~NILl~-------~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~  202 (303)
T d1vjya_         130 AHRDLKSKNILVK-------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             ECSCCCGGGEEEC-------TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             eccccCccceEEc-------CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhh
Confidence            5999999999999       89999999999999765432211 1235678999999999986432     156789999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHHHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHHH
Q psy7274          80 SVGCILAEMISNRPIFPGKHYLDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLGK  159 (308)
Q Consensus        80 SlG~il~ell~g~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  159 (308)
                      |+||++|||++|.++|......... ........+......        ........++..+-..........+.+|+.+
T Consensus       203 S~Gvvl~el~tg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~  273 (303)
T d1vjya_         203 AMGLVFWEIARRCSIGGIHEDYQLP-YYDLVPSDPSVEEMR--------KVVCEQKLRPNIPNRWQSCEALRVMAKIMRE  273 (303)
T ss_dssp             HHHHHHHHHHHTBCBTTBCCCCCCT-TTTTSCSSCCHHHHH--------HHHTTSCCCCCCCGGGGGCHHHHHHHHHHHT
T ss_pred             hhHHHHHHHhhCCCCCCcccccccc-hhhcccccchHHHHH--------HHHhccccCCCCCcccCChHHHHHHHHHHHH
Confidence            9999999999998877432210000 000000001111111        1111111111111111111223458899999


Q ss_pred             hcccCCCCCCCHHHHhc
Q psy7274         160 MLTFNPHKRIGVEDALA  176 (308)
Q Consensus       160 ~L~~dP~~R~t~~eil~  176 (308)
                      ||+.||.+|||+.|+++
T Consensus       274 cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         274 CWYANGAARLTALRIKK  290 (303)
T ss_dssp             TCCSSGGGSCCHHHHHH
T ss_pred             HcccCHhHCcCHHHHHH
Confidence            99999999999999975

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.93  E-value=2e-26  Score=196.96  Aligned_cols=141  Identities=11%  Similarity=0.049  Sum_probs=101.7

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCC----CCCccCcccccccchhhHhhCCCCCCchhhHHHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV   81 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiWSl   81 (308)
                      .||||||+|||++..  ....++.+||+|||+|+........    .......+||+.|+|||++.+ ..++.++||||+
T Consensus       123 iHrDiKp~Nili~~~--~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~-~~~~~~~DiwSl  199 (293)
T d1csna_         123 VYRDIKPDNFLIGRP--NSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEAL  199 (293)
T ss_dssp             ECCCCCGGGEEECCS--SSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHH
T ss_pred             eeccCCccceeecCc--ccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcC-CCCChHHHHHHh
Confidence            699999999999721  1113578999999999976432211    112345689999999999865 569999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCH---HHHHHHHHHhhCCCChhhHhhhhhHHHHHHhhcCCCCCCCCccccCCCCChhHHHHHH
Q psy7274          82 GCILAEMISNRPIFPGKHY---LDQLNHILGILGSPTPEDLSCIINEKARSYLQSLPFKPKVPWEILYPNADPNALDLLG  158 (308)
Q Consensus        82 G~il~ell~g~~pf~~~~~---~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  158 (308)
                      ||++|||++|+.||.+...   ......+....-.+                          +...+.+++++++.+++.
T Consensus       200 G~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~--------------------------~~~~l~~~~p~~l~~ii~  253 (293)
T d1csna_         200 GHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST--------------------------PLRELCAGFPEEFYKYMH  253 (293)
T ss_dssp             HHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS--------------------------CHHHHTTTSCHHHHHHHH
T ss_pred             hHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC--------------------------ChHHhcCCCCHHHHHHHH
Confidence            9999999999999987543   22233332211101                          112233457789999999


Q ss_pred             HhcccCCCCCCCHHHHh
Q psy7274         159 KMLTFNPHKRIGVEDAL  175 (308)
Q Consensus       159 ~~L~~dP~~R~t~~eil  175 (308)
                      .|+..+|++||+.+.+.
T Consensus       254 ~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         254 YARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHCCTTCCCCHHHHH
T ss_pred             HHhcCCcccCcCHHHHH
Confidence            99999999999977654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.58  E-value=2.2e-09  Score=84.16  Aligned_cols=58  Identities=21%  Similarity=0.065  Sum_probs=39.0

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCccccCCCCCCCCCccCcccccccch------hhHhhCCCCCCchhhHH
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVADPEHDHTGFLTEYVATRWYRA------PEIMLNSKGYTKSIDIW   79 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~gt~~y~a------PE~l~~~~~~~~~~DiW   79 (308)
                      .||||||+|||++       . +.++|+|||+|+....+.           ...|..      .+.+  .+.|+.++|+|
T Consensus       125 iHrDiKP~NILv~-------~-~~~~liDFG~a~~~~~~~-----------~~~~l~rd~~~~~~~f--~r~y~~~~d~~  183 (191)
T d1zara2         125 VHGDLSQYNVLVS-------E-EGIWIIDFPQSVEVGEEG-----------WREILERDVRNIITYF--SRTYRTEKDIN  183 (191)
T ss_dssp             ECSCCSTTSEEEE-------T-TEEEECCCTTCEETTSTT-----------HHHHHHHHHHHHHHHH--HHHHCCCCCHH
T ss_pred             EEccCChhheeee-------C-CCEEEEECCCcccCCCCC-----------cHHHHHHHHHHHHHHH--cCCCCCcccHH
Confidence            6999999999997       4 448999999998654221           111211      1222  24488999999


Q ss_pred             HHHHH
Q psy7274          80 SVGCI   84 (308)
Q Consensus        80 SlG~i   84 (308)
                      |+.--
T Consensus       184 s~~~~  188 (191)
T d1zara2         184 SAIDR  188 (191)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            97543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00018  Score=59.38  Aligned_cols=37  Identities=24%  Similarity=0.358  Sum_probs=32.6

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCC
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPA  267 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~  267 (308)
                      ..+.+++.+||..||.+|+|++++|+||||.+.+.|.
T Consensus       254 ~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~  290 (299)
T d1ua2a_         254 DDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT  290 (299)
T ss_dssp             HHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCCC
Confidence            3677888999999999999999999999999876654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00018  Score=58.90  Aligned_cols=35  Identities=37%  Similarity=0.674  Sum_probs=32.3

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      .+.+++.+||..||.+|+|++++|+||||.++++|
T Consensus       258 ~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~~  292 (292)
T d1unla_         258 TGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP  292 (292)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcChhhcCCCCC
Confidence            56788899999999999999999999999998776

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0002  Score=60.48  Aligned_cols=39  Identities=23%  Similarity=0.393  Sum_probs=34.7

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      ...+.+++.+||.+||.+|+|+.++|+||||.+++++.-
T Consensus       276 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~  314 (350)
T d1q5ka_         276 PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNV  314 (350)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTTC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCCCC
Confidence            346778899999999999999999999999999988753

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.71  E-value=0.00055  Score=57.76  Aligned_cols=37  Identities=24%  Similarity=0.472  Sum_probs=31.7

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      .+.+++.+||.+||.+|+|++++|.||||.+...+.+
T Consensus       303 ~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~~~  339 (362)
T d1q8ya_         303 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEE  339 (362)
T ss_dssp             HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCTT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCccc
Confidence            5667789999999999999999999999997654433

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00044  Score=57.38  Aligned_cols=37  Identities=27%  Similarity=0.397  Sum_probs=31.6

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPAD  268 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~  268 (308)
                      .+.+++.+||.+||.+|+|++++|.||||...+.|++
T Consensus       280 ~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~p~~  316 (318)
T d3blha1         280 YALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD  316 (318)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSCCCC
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHHcChhhccCCCCCC
Confidence            4556789999999999999999999999997655543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0006  Score=56.04  Aligned_cols=35  Identities=37%  Similarity=0.705  Sum_probs=32.2

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDP  266 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~  266 (308)
                      .+.+.+.+||..||.+|+|++++|+||||.+.++|
T Consensus       258 ~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            56778899999999999999999999999998776

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=96.17  E-value=0.0008  Score=56.03  Aligned_cols=33  Identities=21%  Similarity=0.395  Sum_probs=30.0

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      .+.+++.+||.+||.+|+|++++|+||||.+..
T Consensus       294 ~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         294 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            577889999999999999999999999998753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0013  Score=54.12  Aligned_cols=34  Identities=38%  Similarity=0.525  Sum_probs=30.6

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ..+.+++.+||..||.+|+|++++|+||||.++.
T Consensus       267 ~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         267 ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            3567788999999999999999999999998864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=96.01  E-value=0.0013  Score=53.48  Aligned_cols=32  Identities=34%  Similarity=0.534  Sum_probs=29.1

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ..+.+.+.+||..||.+|+|++++|.||||.+
T Consensus       255 ~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         255 ESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            35678899999999999999999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=95.28  E-value=0.0045  Score=51.87  Aligned_cols=38  Identities=26%  Similarity=0.517  Sum_probs=33.3

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE  269 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~  269 (308)
                      .+.+++.+||..||.+|+|++++|.||||.....+...
T Consensus       255 ~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~~~~~  292 (350)
T d1koaa2         255 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD  292 (350)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTCCSCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCCCch
Confidence            57788999999999999999999999999987665543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0025  Score=52.79  Aligned_cols=33  Identities=18%  Similarity=0.450  Sum_probs=29.8

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+.+.+||.+||.+|+|++++|+||||.+.
T Consensus       272 ~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         272 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence            357788899999999999999999999999864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0027  Score=51.28  Aligned_cols=36  Identities=17%  Similarity=0.215  Sum_probs=31.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccccC
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYD  265 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~  265 (308)
                      +..+.+.+.+||..||.+|+|+++++.||||.+...
T Consensus       228 s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  263 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCC
Confidence            356788899999999999999999999999987543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.57  E-value=0.0057  Score=49.43  Aligned_cols=32  Identities=38%  Similarity=0.722  Sum_probs=29.7

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      .+.+.+.+||..||.+|++++++|.||||.++
T Consensus       245 ~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         245 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            67788999999999999999999999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.40  E-value=0.0087  Score=48.12  Aligned_cols=32  Identities=19%  Similarity=0.200  Sum_probs=28.9

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ....+.+.+||..||.+|+|++++|+||||.+
T Consensus       234 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         234 SAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence            35667889999999999999999999999975

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.0067  Score=48.75  Aligned_cols=31  Identities=16%  Similarity=0.264  Sum_probs=28.5

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLE  261 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~  261 (308)
                      ..+.+.+.+||..||.+|+|++++|+||||.
T Consensus       240 ~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         240 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            3578889999999999999999999999984

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.01  Score=48.34  Aligned_cols=32  Identities=22%  Similarity=0.337  Sum_probs=29.5

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ..+.+.+.+||..||.+|++++++|+||||..
T Consensus       244 ~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            46788899999999999999999999999974

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.12  E-value=0.0062  Score=48.79  Aligned_cols=33  Identities=24%  Similarity=0.435  Sum_probs=30.0

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      +..+.+.+.+||..||.+|+|++++|+||||..
T Consensus       228 s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         228 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            456788899999999999999999999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.08  E-value=0.011  Score=48.06  Aligned_cols=33  Identities=21%  Similarity=0.304  Sum_probs=29.6

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ...+.+.+.+||..||.+|+|++++|+||||..
T Consensus       242 s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         242 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            346788899999999999999999999999964

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.01  E-value=0.0094  Score=48.42  Aligned_cols=33  Identities=21%  Similarity=0.512  Sum_probs=29.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ..+.+++.+||..||.+|++++++|.||||...
T Consensus       245 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            467788999999999999999999999999753

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.35  E-value=0.011  Score=48.47  Aligned_cols=34  Identities=21%  Similarity=0.162  Sum_probs=30.5

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+|++++|+||||...
T Consensus       240 s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence            3467888999999999999999999999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.31  E-value=0.012  Score=48.13  Aligned_cols=32  Identities=28%  Similarity=0.443  Sum_probs=29.6

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ..+.+.+.+||..||.+|+|+++++.||||..
T Consensus       238 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         238 DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            46788899999999999999999999999975

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=93.28  E-value=0.021  Score=47.65  Aligned_cols=35  Identities=29%  Similarity=0.418  Sum_probs=30.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhhhcCccccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYY  264 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~  264 (308)
                      ...+.+++.+||..||.+|+|++++|.||||...+
T Consensus       256 s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         256 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence            34678889999999999999999999999998643

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.017  Score=47.94  Aligned_cols=32  Identities=19%  Similarity=0.355  Sum_probs=29.1

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccc
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQY  263 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~  263 (308)
                      .+.+++.+||..||.+|+++++++.||||.+.
T Consensus       247 ~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         247 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence            57778899999999999999999999999764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.61  E-value=0.023  Score=45.40  Aligned_cols=30  Identities=27%  Similarity=0.308  Sum_probs=27.7

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ..+.+.+.+||..||.+|++++++++|||+
T Consensus       240 ~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         240 DELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            467888999999999999999999999995

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.013  Score=48.36  Aligned_cols=32  Identities=25%  Similarity=0.428  Sum_probs=29.2

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQ  262 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~  262 (308)
                      ..+.+++.+||..||.+|++++++++||||.+
T Consensus       232 ~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            35678899999999999999999999999975

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.17  E-value=0.035  Score=46.42  Aligned_cols=34  Identities=15%  Similarity=0.320  Sum_probs=30.2

Q ss_pred             cccHHHhhhhhcccCCCCcCC-----hhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIG-----VEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~-----~~~~l~~~~~~~~  263 (308)
                      ...+.+++.+||..||.+|++     ++++++||||...
T Consensus       233 s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         233 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            346788899999999999999     6999999999864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.51  E-value=0.039  Score=45.27  Aligned_cols=36  Identities=19%  Similarity=0.386  Sum_probs=30.7

Q ss_pred             CcccHHHhhhhhcccCCCCcCC-----hhhhhcCccccccc
Q psy7274         229 EPVSWRENWGKMLMFNPHKRIG-----VEGALAHPYLEQYY  264 (308)
Q Consensus       229 ~~~~~~~~~~~~l~~~p~~r~~-----~~~~l~~~~~~~~~  264 (308)
                      -...+.+++.+||..||.+|++     +++++.||||....
T Consensus       259 ~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence            3456788899999999999994     89999999998754

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.38  E-value=0.044  Score=44.20  Aligned_cols=34  Identities=32%  Similarity=0.499  Sum_probs=29.1

Q ss_pred             cccHHHhhhhhcccCCCCcCChhhh------hcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVEGA------LAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~~~------l~~~~~~~~  263 (308)
                      ...+.+++.+||..||.+|+|++++      ++||||..+
T Consensus       234 s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         234 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             CHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence            3467888999999999999999885      789999765

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.88  E-value=0.061  Score=43.91  Aligned_cols=34  Identities=15%  Similarity=0.392  Sum_probs=30.3

Q ss_pred             cccHHHhhhhhcccCCCCcC-----ChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRI-----GVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~-----~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+     ++++++.||||.+.
T Consensus       225 s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         225 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence            34678889999999999997     89999999999875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.51  E-value=0.07  Score=44.24  Aligned_cols=34  Identities=18%  Similarity=0.320  Sum_probs=30.1

Q ss_pred             cccHHHhhhhhcccCCCCcC-----ChhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRI-----GVEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~-----~~~~~l~~~~~~~~  263 (308)
                      ...+.+.+.+||..||.+|+     ++++++.||||...
T Consensus       262 s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            44788889999999999996     89999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.10  E-value=0.059  Score=44.11  Aligned_cols=34  Identities=24%  Similarity=0.424  Sum_probs=29.9

Q ss_pred             cccHHHhhhhhcccCCCCcCChh-hhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIGVE-GALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~~~-~~l~~~~~~~~  263 (308)
                      ...+.+++.+||..||.+|++.. ++++||||.++
T Consensus       227 s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         227 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             CHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             CHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            45678889999999999999985 89999999875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.86  E-value=0.086  Score=43.43  Aligned_cols=34  Identities=15%  Similarity=0.337  Sum_probs=29.6

Q ss_pred             cccHHHhhhhhcccCCCCcCC-----hhhhhcCcccccc
Q psy7274         230 PVSWRENWGKMLMFNPHKRIG-----VEGALAHPYLEQY  263 (308)
Q Consensus       230 ~~~~~~~~~~~l~~~p~~r~~-----~~~~l~~~~~~~~  263 (308)
                      .....+++.+||..||.+|++     ++++++||||...
T Consensus       229 s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         229 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            346788899999999999995     8999999999764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.44  E-value=0.064  Score=42.08  Aligned_cols=27  Identities=19%  Similarity=0.292  Sum_probs=22.5

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLAR   39 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~   39 (308)
                      .|+|+.|.|||++       .++.+-|+||+.+.
T Consensus       186 ~HgD~~~~Nil~~-------~~~~~~lIDwe~a~  212 (263)
T d1j7la_         186 SHGDLGDSNIFVK-------DGKVSGFIDLGRSG  212 (263)
T ss_dssp             ECSCCCTTSEEEE-------TTEEEEECCCTTCE
T ss_pred             EEeeccCcceeec-------CCceEEEeechhcc
Confidence            6999999999997       55555699999875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=86.16  E-value=0.068  Score=41.72  Aligned_cols=29  Identities=14%  Similarity=0.087  Sum_probs=23.4

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccc
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARV   40 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~   40 (308)
                      -.|+|+.|.|||++       .+..+-|+||+.+..
T Consensus       177 liHgD~~~~Nvl~~-------~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         177 VTHGDACLPNIMVE-------NGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EECSSCCGGGEEEE-------TTEEEEECCCTTCEE
T ss_pred             EEeCCCCCcceEEe-------CCceEEEEEchhccc
Confidence            37999999999997       554567999998753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.47  E-value=0.17  Score=41.79  Aligned_cols=69  Identities=33%  Similarity=0.581  Sum_probs=53.6

Q ss_pred             cHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCC-CCCCCCCccccccCCCCHHHHHHHHHHHHhh
Q psy7274         232 SWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADE-PVAEEPFRFSMELDDLPKETLKRLIFEETRV  300 (308)
Q Consensus       232 ~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  300 (308)
                      .+.+++.+||.+||.+|+|++++|+||||....+|... ..++..++.+.++...+.++||++|++||..
T Consensus       286 ~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (355)
T d2b1pa1         286 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN  355 (355)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCHHHHTCCCC-------CCCCCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCCcccccCCCCCCCCcchhhhhcCHHHHHHHHHHHhcC
Confidence            45677899999999999999999999999998887654 3344567878888889999999999999863

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.25  E-value=0.081  Score=42.89  Aligned_cols=27  Identities=15%  Similarity=0.069  Sum_probs=23.3

Q ss_pred             CCCCCCCCCcccCccccccCCCCCceEeccCCcc
Q psy7274           6 PHKRIGVEGALAHPYLEQYYDPADEPICDFGLAR   39 (308)
Q Consensus         6 ~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~   39 (308)
                      .|+|+.+.|++++       .+...-|.||+.|.
T Consensus       186 IHgDl~~dNvl~~-------~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         186 IHADLFQDNVFFL-------GDELSGLIDFYFAC  212 (316)
T ss_dssp             ECSCCCGGGEEEE-------TTEEEEECCCTTCE
T ss_pred             ccCCcchhhhhcc-------cccceeEecccccc
Confidence            6999999999998       66656899999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.39  E-value=0.25  Score=40.45  Aligned_cols=72  Identities=31%  Similarity=0.436  Sum_probs=55.1

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCcccccccCCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhhhcc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYLEQYYDPADEPVAEEPFRFSMELDDLPKETLKRLIFEETRVFKQ  303 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  303 (308)
                      ..+.+++.+||.+||.+|+|++++|+||||.+++++.++|..+ .++.++++.+.+.++||++|++||..|++
T Consensus       275 ~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~k~~~~~e~~~~~~  346 (346)
T d1cm8a_         275 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQ-KYDDSFDDVDRTLDEWKRVTYKEVLSFKP  346 (346)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------CCC-CCCCC-----CCHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCccccccCC-CCCCchhhhhcCHHHHHHHHHHHhhcCCC
Confidence            3567888999999999999999999999999999988888774 57777777778999999999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.13  E-value=0.22  Score=40.77  Aligned_cols=30  Identities=37%  Similarity=0.463  Sum_probs=27.4

Q ss_pred             ccHHHhhhhhcccCCCCcCChhhhhcCccc
Q psy7274         231 VSWRENWGKMLMFNPHKRIGVEGALAHPYL  260 (308)
Q Consensus       231 ~~~~~~~~~~l~~~p~~r~~~~~~l~~~~~  260 (308)
                      ..+.+++.+||..||.+|+|++++|.||||
T Consensus       275 ~~~~dli~~mL~~dP~~R~ta~elL~Hp~f  304 (348)
T d2gfsa1         275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF  304 (348)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHHHHHHCcCChhhCcCHHHHhcCHhh
Confidence            356788899999999999999999999995

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=80.21  E-value=0.28  Score=41.06  Aligned_cols=30  Identities=13%  Similarity=0.106  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCcccCccccccCCCCCceEeccCCccccC
Q psy7274           5 NPHKRIGVEGALAHPYLEQYYDPADEPICDFGLARVAD   42 (308)
Q Consensus         5 ~~HrDlKp~Nili~~~~~~~~~~~~~ki~DFGla~~~~   42 (308)
                      -+|+|+.+.|||++       . +.++|+||-.|....
T Consensus       225 LiHGDl~~gNIlv~-------~-~~~~vID~E~a~~G~  254 (392)
T d2pula1         225 LIHGDLHTGSIFAS-------E-HETKVIDPEFAFYGP  254 (392)
T ss_dssp             EECSCCCGGGEEEC-------S-SCEEECCCTTCEEEC
T ss_pred             eeccCCcCCceeEc-------C-CceEEechhhcccCC
Confidence            47999999999997       3 458999999887543