Psyllid ID: psy7276

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MGFHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHDVTKK
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccccEEEEEHHHHccHHHHccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEEEEEEEccccEEEEEccccc
Coil and Loop (DISEMBL)
MGFHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSAnvlhrdlkpsnlllnttcdLKFFFYFFfsfffhftvhdvtkk
Flexible Loop (DISEMBL)
mgfhqdqitieirhstkeslVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHDVTKK
Low Complexity Region (SEG)
MGFHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKfffyfffsfffhfTVHDVTKK
Disordered region (IsUnstruct)
*******************************TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHD****
Disordered Region (DISOPRED)
*GFHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF************
Disordered Region (DISEMBL)
MGFHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHDVTKK
Disordered Region (DISPRO)
**FHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHDVT**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHDVTKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
WB|WBGene00003401	444	mpk-1 [Caenorhabditis elegans	0.762	0.173	0.647	5.8e-21
UNIPROTKB|P39745	444	mpk-1 "Mitogen-activated prote	0.762	0.173	0.647	5.8e-21
UNIPROTKB|E9PBK7	311	MAPK3 "Mitogen-activated prote	0.762	0.247	0.635	8e-21
UNIPROTKB|E9PJF0	316	MAPK3 "Mitogen-activated prote	0.762	0.243	0.635	8e-21
UNIPROTKB|E9PQW4	339	MAPK3 "Mitogen-activated prote	0.762	0.227	0.635	8e-21
UNIPROTKB|F1NRN9	320	MAPK1 "Uncharacterized protein	0.475	0.15	0.958	1e-20
UNIPROTKB|F1P066	321	MAPK1 "Uncharacterized protein	0.475	0.149	0.958	1e-20
UNIPROTKB|F1MI27	320	MAPK1 "Mitogen-activated prote	0.475	0.15	0.958	1e-20
UNIPROTKB|P46196	360	MAPK1 "Mitogen-activated prote	0.475	0.133	0.958	1e-20
UNIPROTKB|E2R2N2	360	MAPK1 "Uncharacterized protein	0.475	0.133	0.958	1e-20

WB|WBGene00003401 mpk-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 251 (93.4 bits), Expect = 5.8e-21, P = 5.8e-21
 Identities = 55/85 (64%), Positives = 64/85 (75%)

Query:     4 HQDQITIE--IRHSTKESL-----VSFREYSDSHRT-KYQRLSNDHICYFLYQILRGLKY 55
             H++ I I+  IR  T +SL     V     +D ++  K Q+LSNDH+CYFLYQILRGLKY
Sbjct:   151 HENIINIQEIIRSETVDSLKDIYIVQCLMETDLYKLLKTQKLSNDHVCYFLYQILRGLKY 210

Query:    56 IHSANVLHRDLKPSNLLLNTTCDLK 80
             IHSANVLHRDLKPSNLLLNTTCDLK
Sbjct:   211 IHSANVLHRDLKPSNLLLNTTCDLK 235

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040027 "negative regulation of vulval development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0051729 "germline cell cycle switching, mitotic to meiotic cell cycle" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

GO:0040025 "vulval development" evidence=IGI

GO:0007265 "Ras protein signal transduction" evidence=IGI

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0001556 "oocyte maturation" evidence=IMP

UNIPROTKB|P39745 mpk-1 "Mitogen-activated protein kinase mpk-1" [Caenorhabditis elegans (taxid:6239)]

 Score = 251 (93.4 bits), Expect = 5.8e-21, P = 5.8e-21
 Identities = 55/85 (64%), Positives = 64/85 (75%)

Query:     4 HQDQITIE--IRHSTKESL-----VSFREYSDSHRT-KYQRLSNDHICYFLYQILRGLKY 55
             H++ I I+  IR  T +SL     V     +D ++  K Q+LSNDH+CYFLYQILRGLKY
Sbjct:   151 HENIINIQEIIRSETVDSLKDIYIVQCLMETDLYKLLKTQKLSNDHVCYFLYQILRGLKY 210

Query:    56 IHSANVLHRDLKPSNLLLNTTCDLK 80
             IHSANVLHRDLKPSNLLLNTTCDLK
Sbjct:   211 IHSANVLHRDLKPSNLLLNTTCDLK 235

GO:0000165 "MAPK cascade" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0040025 "vulval development" evidence=IMP

GO:0004707 "MAP kinase activity" evidence=IMP

UNIPROTKB|E9PBK7 MAPK3 "Mitogen-activated protein kinase 3" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 54/85 (63%), Positives = 61/85 (71%)

Query:     4 HQDQITIE--IRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKY 55
             H++ I I   +R ST E++       D   T      K Q+LSNDHICYFLYQILRGLKY
Sbjct:    68 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 127

Query:    56 IHSANVLHRDLKPSNLLLNTTCDLK 80
             IHSANVLHRDLKPSNLL+NTTCDLK
Sbjct:   128 IHSANVLHRDLKPSNLLINTTCDLK 152

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|E9PJF0 MAPK3 "Mitogen-activated protein kinase 3" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 54/85 (63%), Positives = 61/85 (71%)

Query:     4 HQDQITIE--IRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKY 55
             H++ I I   +R ST E++       D   T      K Q+LSNDHICYFLYQILRGLKY
Sbjct:    97 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 156

Query:    56 IHSANVLHRDLKPSNLLLNTTCDLK 80
             IHSANVLHRDLKPSNLL+NTTCDLK
Sbjct:   157 IHSANVLHRDLKPSNLLINTTCDLK 181

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|E9PQW4 MAPK3 "Mitogen-activated protein kinase 3" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 54/85 (63%), Positives = 61/85 (71%)

Query:     4 HQDQITIE--IRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKY 55
             H++ I I   +R ST E++       D   T      K Q+LSNDHICYFLYQILRGLKY
Sbjct:    97 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 156

Query:    56 IHSANVLHRDLKPSNLLLNTTCDLK 80
             IHSANVLHRDLKPSNLL+NTTCDLK
Sbjct:   157 IHSANVLHRDLKPSNLLINTTCDLK 181

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|F1NRN9 MAPK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/48 (95%), Positives = 46/48 (95%)

Query:    33 KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             K Q LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK
Sbjct:    77 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 124

GO:0005524 "ATP binding" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

UNIPROTKB|F1P066 MAPK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/48 (95%), Positives = 46/48 (95%)

Query:    33 KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             K Q LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK
Sbjct:    78 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 125

GO:0005524 "ATP binding" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

UNIPROTKB|F1MI27 MAPK1 "Mitogen-activated protein kinase 1" [Bos taurus (taxid:9913)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/48 (95%), Positives = 46/48 (95%)

Query:    33 KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             K Q LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK
Sbjct:    77 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 124

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P46196 MAPK1 "Mitogen-activated protein kinase 1" [Bos taurus (taxid:9913)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/48 (95%), Positives = 46/48 (95%)

Query:    33 KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             K Q LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK
Sbjct:   117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164

GO:0005737 "cytoplasm" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0070849 "response to epidermal growth factor stimulus" evidence=ISS

GO:0005819 "spindle" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R2N2 MAPK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 46/48 (95%), Positives = 46/48 (95%)

Query:    33 KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             K Q LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK
Sbjct:   117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0050852 "T cell receptor signaling pathway" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043330 "response to exogenous dsRNA" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0019858 "cytosine metabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0010800 "positive regulation of peptidyl-threonine phosphorylation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0001784 "phosphotyrosine binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	101
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	6e-33
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-28
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	8e-27
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	7e-26
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-24
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-22
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-20
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	8e-20
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-19
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-18
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-18
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	5e-18
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	6e-18
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-17
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	9e-17
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-15
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-15
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-14
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	4e-14
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-14
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-13
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-13
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	7e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-12
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-12
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-12
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	1e-11
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-11
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-11
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-11
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-11
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-11
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-11
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-11
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	7e-11
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-10
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-10
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-10
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-10
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-10
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-10
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	6e-10
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-10
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	7e-10
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-10
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-09
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-09
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-09
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-08
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-08
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-08
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-08
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	5e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-08
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-08
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-07
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-07
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-07
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-07
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-07
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-07
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-07
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	6e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-07
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-06
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	2e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-06
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	4e-06
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	5e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-06
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	8e-06
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	8e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	9e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-05
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-05
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-05
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-05
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-05
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	5e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	6e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	8e-05
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	8e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-04
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-04
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	5e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	5e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	6e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	6e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	6e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	7e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	7e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	7e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	8e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	9e-04
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	0.001
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.001
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.001
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.001
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.001
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.001
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.001
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.001
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.001
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.001
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.002
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	0.002
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	0.002
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.002
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.002
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	0.002
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.002
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.002
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.002
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.002
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.002
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	0.002
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.002
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	0.002
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.002
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.003
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.003
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.003
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	0.003
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.003
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.003
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.003
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	0.003
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.003
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.003
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.003
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	0.003
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.004
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	0.004
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.004
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.004
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	0.004
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	0.004
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.004
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.004
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.004

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  116 bits (292), Expect = 6e-33
 Identities = 45/55 (81%), Positives = 48/55 (87%), Gaps = 1/55 (1%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D ++  K Q LSNDHI YFLYQILRGLKYIHSANVLHRDLKPSNLLLNT CDLK
Sbjct: 92  TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLK 146

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  104 bits (262), Expect = 1e-28
 Identities = 36/46 (78%), Positives = 43/46 (93%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Q L++DHI YFLYQILRGLKY+HSANV+HRDLKPSN+L+N+ CDLK
Sbjct: 98  QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLK 143

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  100 bits (250), Expect = 8e-27
 Identities = 39/46 (84%), Positives = 41/46 (89%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Q LS+DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLK
Sbjct: 103 QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLK 148

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 97.4 bits (243), Expect = 7e-26
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 2/56 (3%)

Query: 27  SDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           SD H   +  Q L+ +HI YFLYQ+LRGLKYIHSANV+HRDLKPSNLL+N  C+L+
Sbjct: 92  SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELR 147

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 92.4 bits (230), Expect = 6e-24
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K Q+LS+DHI + +YQILRGLKYIHSA ++HRDLKPSN+ +N  C+LK
Sbjct: 111 KCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 158

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 87.5 bits (217), Expect = 4e-22
 Identities = 32/46 (69%), Positives = 37/46 (80%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Q L++ H   F+YQIL GLKYIHSANVLHRDLKP NLL+N  C+LK
Sbjct: 100 QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELK 145

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 83.3 bits (206), Expect = 2e-20
 Identities = 32/46 (69%), Positives = 39/46 (84%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Q LS+DH+  FLYQILRGLKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 98  QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK 143

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 80.4 bits (199), Expect = 8e-20
 Identities = 24/44 (54%), Positives = 30/44 (68%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L    I  +LYQ+L+GL + HS  +LHRDLKP NLL+NT   LK
Sbjct: 95  LPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLK 138

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 80.3 bits (198), Expect = 2e-19
 Identities = 35/55 (63%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D HR    + L    I YFLYQILRGLKY+HSA V+HRDLKPSN+L+N  CDLK
Sbjct: 94  TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLK 148

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 78.3 bits (193), Expect = 1e-18
 Identities = 28/41 (68%), Positives = 34/41 (82%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
             LS +H   F+YQ+LRGLKYIHSANVLHRDLKP+N+ +NT
Sbjct: 109 GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT 149

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 77.6 bits (192), Expect = 2e-18
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L + H  Y +YQ+L+ LKYIHS NV+HRDLKPSN+LLN+ C +K
Sbjct: 104 LEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVK 147

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 76.6 bits (188), Expect = 5e-18
 Identities = 28/48 (58%), Positives = 41/48 (85%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K Q+LS++H+ + +YQ+LRGLKYIHSA ++HRDLKPSN+ +N  C+L+
Sbjct: 111 KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 158

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 76.2 bits (187), Expect = 6e-18
 Identities = 31/48 (64%), Positives = 42/48 (87%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K Q+L++DH+ + +YQILRGLKYIHSA+++HRDLKPSNL +N  C+LK
Sbjct: 113 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 160

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 73.7 bits (182), Expect = 2e-17
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               K  RLS D   ++L QIL  L+Y+HS  ++HRDLKP N+LL+    +K
Sbjct: 86  DLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVK 137

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 72.9 bits (179), Expect = 9e-17
 Identities = 28/44 (63%), Positives = 34/44 (77%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L+ +H  +FLYQ+LR LKYIH+ANV HRDLKP N+L N  C LK
Sbjct: 100 LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLK 143

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 71.9 bits (176), Expect = 2e-16
 Identities = 27/48 (56%), Positives = 39/48 (81%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K+++LS D I + +YQ+L+GLKYIH+A ++HRDLKP NL +N  C+LK
Sbjct: 111 KHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELK 158

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 68.4 bits (168), Expect = 2e-15
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             + ++   LS D       QILRGL+Y+HS  ++HRDLKP N+LL+    +K
Sbjct: 86  FDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVK 138

Length = 260

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 67.1 bits (165), Expect = 8e-15
 Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 24  REYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++Y D        LS + I   +YQ+LRGL Y HS  +LHRDLKP N+L+N    LK
Sbjct: 85  KKYLDKRPGP---LSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLK 138

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 66.1 bits (161), Expect = 3e-14
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 11/73 (15%)

Query: 19  SLVSFREYSDSH------RTKYQR-----LSNDHICYFLYQILRGLKYIHSANVLHRDLK 67
           S VS  E+ D +      +T  Q+     LS D + Y +YQ+L GLKYIHSA ++HRDLK
Sbjct: 85  SAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLK 144

Query: 68  PSNLLLNTTCDLK 80
           P NL +N  C+LK
Sbjct: 145 PGNLAVNEDCELK 157

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 65.1 bits (159), Expect = 4e-14
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 5/70 (7%)

Query: 16  TKESLVSFREYSDSHRTKYQR-----LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 70
           TK++L    EY D+   +Y       LS  ++  FL+Q+LRGL Y H   VLHRDLKP N
Sbjct: 74  TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQN 133

Query: 71  LLLNTTCDLK 80
           LL++   +LK
Sbjct: 134 LLISERGELK 143

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 19/52 (36%), Positives = 32/52 (61%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           S   K+ +L    I  +  QIL GL Y+HS  ++HRD+K +N+L+++   +K
Sbjct: 90  SLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVK 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 19/51 (37%), Positives = 31/51 (60%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             +   + +   I  ++ Q+L GL+Y+HS  +LHRD+K SN+L+N    LK
Sbjct: 90  LDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLK 140

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 22/44 (50%), Positives = 35/44 (79%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L ++ + Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LK
Sbjct: 115 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 158

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 62.1 bits (151), Expect = 7e-13
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 10  IEIRHSTKESLVSFREYSDSHRTKY----QRLSNDHIC-YFLYQILRGLKYIHSANVLHR 64
            ++ HS K+  + F EY D    KY        +  I   F++Q+L+GL + HS NVLHR
Sbjct: 65  YDVLHSDKKLTLVF-EYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHR 123

Query: 65  DLKPSNLLLNTTCDLK 80
           DLKP NLL+N   +LK
Sbjct: 124 DLKPQNLLINKNGELK 139

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 60.7 bits (148), Expect = 1e-12
 Identities = 22/48 (45%), Positives = 31/48 (64%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           +    +LS D I   L QIL GL+Y+HS  ++HRDLKP N+LL++   
Sbjct: 83  KENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNG 130

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 25  EY----SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           EY    S     K  +L   +I + L ++L GL+Y+H    +HRD+K +N+LL+   D+K
Sbjct: 79  EYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVK 138

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 59.6 bits (145), Expect = 4e-12
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +LYQ+L+G+ Y HS  VLHRDLKP NLL++    LK
Sbjct: 104 YLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALK 139

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 58.6 bits (141), Expect = 1e-11
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 16  TKESLVSFREYSDSHRTKYQR-----LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 70
           TKE+L    EY  +   +Y       L  +++  FL+Q+LRGL YIH   +LHRDLKP N
Sbjct: 74  TKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQN 133

Query: 71  LLLNTTCDLKF 81
           LL++ T +LK 
Sbjct: 134 LLISDTGELKL 144

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 1e-11
 Identities = 22/50 (44%), Positives = 31/50 (62%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R K +RL  + I Y L + LRGL Y+H   V+HRD+K  N+LL    ++K
Sbjct: 104 RKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVK 153

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 4   HQDQITIEIRHSTKESLVSFREYSDSHRTKYQR-----LSNDHICYFLYQILRGLKYIHS 58
           H + +T+     T +SL    EY D    +Y       +S  ++  FLYQILRGL Y H 
Sbjct: 63  HANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR 122

Query: 59  ANVLHRDLKPSNLLLNTTCDLKF 81
             VLHRDLKP NLL+N   +LK 
Sbjct: 123 RKVLHRDLKPQNLLINERGELKL 145

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 58.4 bits (141), Expect = 1e-11
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 16  TKESLVSFREYSDSHRTKY--QRLSNDHIC---YFLYQILRGLKYIHSANVLHRDLKPSN 70
           TKE+L    EY  +   +Y  Q     H      F++Q+LRGL YIH  ++LHRDLKP N
Sbjct: 74  TKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQN 133

Query: 71  LLLNTTCDLKF 81
           LL++   +LK 
Sbjct: 134 LLISYLGELKL 144

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 18/50 (36%), Positives = 34/50 (68%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++  Q L+   I Y   ++L+GL+Y+HS  ++HRD+K +N+LL +  ++K
Sbjct: 89  KSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVK 138

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 57.7 bits (139), Expect = 3e-11
 Identities = 22/49 (44%), Positives = 36/49 (73%)

Query: 34  YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFF 82
           +  L ++ + Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LK  
Sbjct: 117 HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 165

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            L+   I  ++   LRGL+Y+HS  +LHRDLKP+NLL+ +   LK
Sbjct: 98  VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLK 142

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 56.7 bits (138), Expect = 4e-11
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             + + +    + I  +  Q+   LKY+HS  +LHRD+KP N+ L +   +K
Sbjct: 92  KQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVK 143

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 57.0 bits (137), Expect = 5e-11
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFF 82
           L ++ + Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LK  
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 56.6 bits (136), Expect = 7e-11
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFF 82
           L ++ + Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LK  
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 161

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 19/45 (42%), Positives = 31/45 (68%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R++   I Y   ++L+GL+Y+HS NV+HRD+K  N+LL+    +K
Sbjct: 112 RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVK 156

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 55.4 bits (133), Expect = 2e-10
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 4   HQDQITIEIRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHS 58
           H + +T+     T+  L    EY DS   +Y       +S  ++  F++Q+LRGL Y H 
Sbjct: 62  HANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK 121

Query: 59  ANVLHRDLKPSNLLLNTTCDLKF 81
             +LHRDLKP NLL+N   +LK 
Sbjct: 122 RKILHRDLKPQNLLINEKGELKL 144

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 55.4 bits (133), Expect = 2e-10
 Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 4   HQDQITIEIRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHS 58
           H + +T+     T++SL    EY D    +Y       ++  ++  FL+Q+LRGL Y H 
Sbjct: 63  HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR 122

Query: 59  ANVLHRDLKPSNLLLNTTCDLKF 81
             VLHRDLKP NLL+N   +LK 
Sbjct: 123 RKVLHRDLKPQNLLINERGELKL 145

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 54.4 bits (131), Expect = 3e-10
 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 7/70 (10%)

Query: 11  EIRHSTKESLVSFREYSD----SHRTKYQRLSNDH--ICYFLYQILRGLKYIHSANVLHR 64
           ++ HS K   + F EY D     H       + +   I  +LYQILRG+ Y HS  VLHR
Sbjct: 68  DVVHSEKRLYLVF-EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHR 126

Query: 65  DLKPSNLLLN 74
           DLKP NLL++
Sbjct: 127 DLKPQNLLID 136

Length = 294

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)

Query: 44  YFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLK 80
           Y   QIL+GL Y+H+  +++HRD+KPSNLL+N+  ++K
Sbjct: 103 YIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVK 140

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 54.2 bits (131), Expect = 4e-10
 Identities = 15/36 (41%), Positives = 27/36 (75%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++  +L+G+ Y+H+  ++HRDLKP+NLL++    LK
Sbjct: 104 YMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLK 139

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 53.4 bits (129), Expect = 6e-10
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            L+ + I   LYQ L+GL+Y+HS   +HRD+K  N+LLN     K
Sbjct: 95  TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAK 139

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 54.0 bits (130), Expect = 6e-10
 Identities = 23/43 (53%), Positives = 28/43 (65%)

Query: 38  SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           S DHI  F+ Q+L GL Y H  N LHRD+K SN+LLN    +K
Sbjct: 114 SEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIK 156

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 53.6 bits (129), Expect = 7e-10
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 16  TKESLVSFREYSDSHRTKYQRLSNDH-------ICYFLYQILRGLKYIHSANVLHRDLKP 68
           T+  L+   EY D    KY              +  F YQ+L+G+ + H   VLHRDLKP
Sbjct: 69  TENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKP 128

Query: 69  SNLLLNTTCDLK 80
            NLL+N   +LK
Sbjct: 129 QNLLINKRGELK 140

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 53.3 bits (129), Expect = 8e-10
 Identities = 20/44 (45%), Positives = 26/44 (59%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           K +  S   I   +YQIL+GL +IH     HRDLKP NLL++  
Sbjct: 92  KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP 135

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 16/45 (35%), Positives = 30/45 (66%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +L+   I  ++ Q+L G+ Y+H  ++LHRD+K +N+L++    LK
Sbjct: 111 KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILK 155

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 19/52 (36%), Positives = 32/52 (61%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           SH  K  R       ++  Q++  L+Y+HS ++++RDLKP NLLL++   +K
Sbjct: 90  SHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIK 141

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            + Q+L G+ ++H   +LHRDLK SNLLLN    LK
Sbjct: 111 LMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILK 146

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 4e-09
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 16  TKESLVSFREYSD--SHRT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 70
           T +SL    EY++  S R    K+       +  ++YQ+L+GL Y+H   V+HRD+K +N
Sbjct: 70  TSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAAN 129

Query: 71  LLLN 74
           +L  
Sbjct: 130 ILTT 133

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 51.0 bits (122), Expect = 6e-09
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKFF 82
            Y R     + +F  Q+L GL Y+HS  +LHRDLK  NLL++    C +  F
Sbjct: 101 TYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDF 152

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 50.9 bits (122), Expect = 7e-09
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 7/57 (12%)

Query: 29  SHRT--KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-----CD 78
           S RT  K   ++  +I   + ++L  LKYIH   V+HRD+K +N+L+  T     CD
Sbjct: 88  SVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCD 144

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +L+Q+L+GL + HS  VLHRDLKP NLL+NT   +K
Sbjct: 105 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 140

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 5/41 (12%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTT-----CDLKF 81
           ++Q+L+ + Y HS N++HRD+KP N+L++ +     CD  F
Sbjct: 106 IWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGF 146

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
            + + + LS   +  F  QI RG++Y+ S N +HRDL   N L+ 
Sbjct: 93  RKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG 137

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 49.1 bits (117), Expect = 3e-08
 Identities = 17/33 (51%), Positives = 27/33 (81%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           QIL G+ Y+H  +++HRD+KPSNLL+N+  ++K
Sbjct: 176 QILSGIAYLHRRHIVHRDIKPSNLLINSAKNVK 208

Length = 353

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 18/28 (64%), Positives = 24/28 (85%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLL 73
           L+QIL G+ Y+HS  VLHRDLKP+N+L+
Sbjct: 114 LWQILNGVHYLHSNWVLHRDLKPANILV 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 5/35 (14%)

Query: 49  ILRGLKYIHSANVLHRDLKPSNLLLNTT-----CD 78
           +L+GL Y+HS  ++HRD+KPSN+LL        CD
Sbjct: 114 VLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCD 148

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 15/38 (39%), Positives = 26/38 (68%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           L  D    ++ +I+  L+Y+HS  ++HRDLKP N+L++
Sbjct: 90  LDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID 127

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 5/42 (11%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-----CDLKF 81
           +L+QILRG+++ HS N++HRD+KP N+L++ +     CD  F
Sbjct: 105 YLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGF 146

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 48.6 bits (116), Expect = 4e-08
 Identities = 19/30 (63%), Positives = 25/30 (83%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           +LYQIL+G+ + HS  VLHRDLKP NLL++
Sbjct: 106 YLYQILQGILFCHSRRVLHRDLKPQNLLID 135

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 17/44 (38%), Positives = 29/44 (65%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L  + I   + Q+LRG+ ++HS  ++HRDLKP N+L+ +   +K
Sbjct: 104 LPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVK 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 48.3 bits (115), Expect = 5e-08
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 24  REYSDSHRTKYQR-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           +++ DS+     R L    I  F+YQ+L+G+ + H   V+HRDLKP NLL++
Sbjct: 93  KKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD 144

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           LS   I Y   + L+GL Y+H    +HRD+K +N+LL    D+K
Sbjct: 98  LSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVK 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 17/45 (37%), Positives = 25/45 (55%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +LS   +  F  QI RG++Y+ S N +HRDL   N L+     +K
Sbjct: 98  KLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVK 142

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 47.7 bits (114), Expect = 8e-08
 Identities = 15/34 (44%), Positives = 24/34 (70%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           Q+L GL Y+HS  ++HRD+KP+N+ L+    +K 
Sbjct: 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKL 140

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 27  SDSHRTKYQRLSN--DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           S   R+K+  L +    I ++  QIL GLKY+H   ++HRD+K  N+L+NT
Sbjct: 93  SALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT 143

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           KY       I  +  QIL GL+Y+H  N +HRD+K +N+L++T   +K
Sbjct: 95  KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVK 142

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 19/33 (57%), Positives = 24/33 (72%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Q+LRGL+Y+H   ++HRDLK SNLLL     LK
Sbjct: 116 QLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLK 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 17/46 (36%), Positives = 27/46 (58%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           R K Q    + + ++L+QI+  + YIH A +LHRD+K  N+ L   
Sbjct: 92  RQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKA 137

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +    I     Q+LRGL+ +H   +LHRDLK +N+LL     +K
Sbjct: 100 IPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVK 143

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query: 32  TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
            KY  L      ++  +IL  L+Y+HS  ++HRDLKP N+LL+
Sbjct: 94  RKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD 136

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 21/51 (41%), Positives = 30/51 (58%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
            TK   L  D I Y   +ILRGL ++H+  V+HRD+K  N+LL    ++K 
Sbjct: 112 NTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKL 162

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 17/36 (47%), Positives = 28/36 (77%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           ++Q+LRGL ++HS  V+HRDLKP N+L+ ++  +K 
Sbjct: 116 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           KY       I  +  Q+LRGL Y+H   ++HRD+K +NLL+++T
Sbjct: 96  KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST 139

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 5/64 (7%)

Query: 16  TKESLVSFREYSD-----SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 70
           T+E L    EY+      SH +K  R S +   ++  +I+  L+Y+HS  +++RDLKP N
Sbjct: 64  TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPEN 123

Query: 71  LLLN 74
           +LL+
Sbjct: 124 ILLD 127

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 45.8 bits (109), Expect = 4e-07
 Identities = 17/48 (35%), Positives = 26/48 (54%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K  + +   I   +  +L GL YIH   +LHRD+K +N+L+     LK
Sbjct: 112 KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILK 159

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L+   I Y   Q+L  L ++HS  V+HRDLK  N+LL    D+K
Sbjct: 100 LTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVK 143

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           L  D I +F  QIL  L ++H+  +LHRDLK  N+LL+
Sbjct: 98  LDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)

Query: 18  ESLVSFREYSDSHRTK-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 72
           E+L  F EY      K     Y  L+      +  QIL G++Y+HS  ++HRD+K +N+L
Sbjct: 77  ETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANIL 136

Query: 73  LNTTCDLK 80
            ++  ++K
Sbjct: 137 RDSAGNVK 144

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 6e-07
 Identities = 15/44 (34%), Positives = 28/44 (63%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L  D    ++ +++ G++ +H   ++HRD+KP NLL++ T  LK
Sbjct: 94  LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLK 137

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 45.4 bits (107), Expect = 6e-07
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           QRL    I Y LY  L GL+++H+  ++HRD+K +N+LL T   +K 
Sbjct: 123 QRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKL 169

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 45.2 bits (107), Expect = 7e-07
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
              + + L  D +  F  QIL GL ++HS  +LHRD+K  NL L+
Sbjct: 91  KMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD 135

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 45.1 bits (105), Expect = 8e-07
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
               +   LS     + L QIL  L+Y+HS  ++HRD+KP N+LL+
Sbjct: 90  KKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD 135

Length = 384

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 32  TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           TK   L  + I Y   +ILRGL ++H   V+HRD+K  N+LL    ++K 
Sbjct: 103 TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL 152

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)

Query: 47  YQILRGLKYIHSA-NVLHRDLKPSNLLLNT 75
             +L+GL Y+H    ++HRD+KPSN+L+N+
Sbjct: 107 VAVLKGLTYLHEKHKIIHRDVKPSNILVNS 136

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 22/30 (73%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           ++YQ+L+ L ++H   + HRD+KP N+L+ 
Sbjct: 105 YMYQLLKSLDHMHRNGIFHRDIKPENILIK 134

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           ++ F   S +++   Q L    +   LYQIL G+ Y+H+  VLHRDLKP+N+L+
Sbjct: 89  IIKFHRASKANKKPMQ-LPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILV 141

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           RL+   +   L QIL GL  +H    +HRDL P+N+ +N+
Sbjct: 115 RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINS 154

Length = 335

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           L   +I   L +IL+GL Y+HS   +HRD+K +N+LL+   D+K 
Sbjct: 98  LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKL 142

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 43.1 bits (101), Expect = 4e-06
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           ++ F   S +++   Q L    +   LYQIL G+ Y+H+  VLHRDLKP+N+L+
Sbjct: 89  IIKFHRASKANKKPVQ-LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 43.1 bits (102), Expect = 4e-06
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-----CDLKF 81
           +    I   ++Q L+ + + H  N +HRD+KP N+L+        CD  F
Sbjct: 97  VPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGF 146

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 42.9 bits (101), Expect = 5e-06
 Identities = 14/32 (43%), Positives = 25/32 (78%)

Query: 43  CYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           C++  QI+ GL+++H   +++RDLKP N+LL+
Sbjct: 100 CFYTAQIISGLEHLHQRRIIYRDLKPENVLLD 131

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 42  ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           I   L ++L+GL+Y+HS   +HRD+K  N+LL     +K
Sbjct: 104 IATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVK 142

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 15/44 (34%), Positives = 31/44 (70%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           H ++  + S + + +++ +I+  L+Y+HS  ++HRD+KP N+LL
Sbjct: 90  HLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL 133

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.0 bits (99), Expect = 8e-06
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           YF  Q+   L+++HS  ++HRD+KP+N+ +  T  +K
Sbjct: 111 YF-VQLCSALEHMHSKRIMHRDIKPANVFITATGVVK 146

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 42.5 bits (100), Expect = 8e-06
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 6/52 (11%)

Query: 31  RTKYQRLSNDHIC------YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           RT  + L+ D           + Q+L  L   H+  ++HRDLKP N++++ T
Sbjct: 64  RTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQT 115

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 42.2 bits (99), Expect = 8e-06
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 49  ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           +++GL Y+ S  +LHRD+KPSN+L+NT   +K 
Sbjct: 104 VVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKL 136

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 42.0 bits (99), Expect = 9e-06
 Identities = 15/27 (55%), Positives = 24/27 (88%), Gaps = 1/27 (3%)

Query: 49  ILRGLKYIHSA-NVLHRDLKPSNLLLN 74
           I++ L+Y+HS  +V+HRD+KPSN+L+N
Sbjct: 112 IVKALEYLHSKLSVIHRDVKPSNVLIN 138

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 11/67 (16%)

Query: 15  STKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           S K+ L ++   ++S   KY R           QIL G+ Y+HS  ++HRD+K +N+L +
Sbjct: 92  SVKDQLKAYGALTESVTRKYTR-----------QILEGMSYLHSNMIVHRDIKGANILRD 140

Query: 75  TTCDLKF 81
           +  ++K 
Sbjct: 141 SAGNVKL 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 15/36 (41%), Positives = 27/36 (75%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           F+ QIL+GL Y+H+  ++HRD+K +N+L++    +K
Sbjct: 111 FVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIK 146

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           L  + I   + Q LRGL ++H+  ++HRDLKP N+L+ +   +K 
Sbjct: 105 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKL 149

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNT 75
              E+ +S + K QR + + I     Q++  L+Y+H    ++HRDL P+N++L  
Sbjct: 95  PLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 13/27 (48%), Positives = 21/27 (77%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLN 74
           QIL GL+Y+H+  ++HRD+K  N+ +N
Sbjct: 165 QILEGLRYLHAQRIIHRDVKTENIFIN 191

Length = 357

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           L    I   L +IL+GL Y+HS   +HRD+K +N+LL+   ++K 
Sbjct: 98  LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKL 142

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 19/45 (42%), Positives = 27/45 (60%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           LS   I Y   + L+GL Y+HS   +HRD+K +N+LL    D+K 
Sbjct: 103 LSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKL 147

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 18/52 (34%), Positives = 32/52 (61%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +H  K  R  ND   ++  +++   +Y+HS ++++RDLKP NLLL+    +K
Sbjct: 107 THLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVK 158

Length = 329

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 17/47 (36%), Positives = 29/47 (61%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           +R+    I Y L++ L GL+++H    +HRD+K +N+LL T   +K 
Sbjct: 119 ERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKL 165

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 12  IRHSTKESLVSFREYSDSHRTK-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDL 66
           +R   ++ L  F EY      K     Y  L+ +    +  QIL+G+ Y+HS  ++HRD+
Sbjct: 73  LRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDI 132

Query: 67  KPSNLLLNTTCDLKF 81
           K +N+L ++  ++K 
Sbjct: 133 KGANILRDSAGNVKL 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 17/30 (56%), Positives = 22/30 (73%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           + YQ+ R L YIHS  + HRDLKP NLL++
Sbjct: 175 YSYQLCRALAYIHSKFICHRDLKPQNLLID 204

Length = 440

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 12  IRHSTKESLVSFREYSDSHRTK-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDL 66
           +R   + +L  F E+      K     Y  L+ +    +  QIL G+ Y+HS  ++HRD+
Sbjct: 73  LRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDI 132

Query: 67  KPSNLLLNTTCDLKF 81
           K +N+L ++  ++K 
Sbjct: 133 KGANILRDSVGNVKL 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           Q+L  L+Y+HS  ++HRDLK  N+LL    D+K 
Sbjct: 118 QMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKL 151

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 41  HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
            I   L +IL+GL Y+HS   +HRD+K +N+LL+   D+K 
Sbjct: 102 QIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKL 142

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 40.7 bits (95), Expect = 3e-05
 Identities = 14/32 (43%), Positives = 23/32 (71%)

Query: 42  ICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
            C +  QIL G+ Y+H+  V+HRD+K +N++L
Sbjct: 104 FCKYTKQILDGVAYLHNNCVVHRDIKGNNVML 135

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 5/37 (13%)

Query: 47  YQILRGLKYI---HSANVLHRDLKPSNLLLNTTCDLK 80
             +LRGL Y+   H   ++HRD+KPSN+L+N+  ++K
Sbjct: 106 IAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIK 140

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 17/45 (37%), Positives = 29/45 (64%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R SN    ++  +I+  L+Y+HS  +++RDLKP N+LL+    +K
Sbjct: 97  RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIK 141

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 18/40 (45%), Positives = 28/40 (70%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           +R  ND  C++  QI+   +Y+ S N+++RDLKP NLLL+
Sbjct: 126 KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD 165

Length = 340

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 40.3 bits (94), Expect = 4e-05
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           + LS + +C +  Q+L G+ Y+H   +LHRDLK  N+ L
Sbjct: 101 KTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFL 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           R   ++L+   +     QI +G++Y+ S N +HRDL   N L+ 
Sbjct: 93  RKHGEKLTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVT 136

Length = 258

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 40.2 bits (94), Expect = 5e-05
 Identities = 14/35 (40%), Positives = 25/35 (71%)

Query: 40  DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           D  C++L +I   L+++H   +++RDLKP N+LL+
Sbjct: 100 DTACFYLSEISLALEHLHQQGIIYRDLKPENILLD 134

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 40.1 bits (93), Expect = 5e-05
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + Q+L GL+ +H   ++HRD+KP NLL+     +K
Sbjct: 315 MRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVK 349

Length = 507

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 39.7 bits (93), Expect = 6e-05
 Identities = 12/38 (31%), Positives = 24/38 (63%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           R++ + I      +L+ L ++H+  V+HRD+K  ++LL
Sbjct: 111 RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL 148

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 39.6 bits (92), Expect = 6e-05
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 9/82 (10%)

Query: 2   GFHQD-QITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSAN 60
            F+ D +I+I + H    SL       D    + +R+  + +      +LRGL Y+   +
Sbjct: 71  AFYSDGEISICMEHMDGGSL-------DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH 123

Query: 61  -VLHRDLKPSNLLLNTTCDLKF 81
            ++HRD+KPSN+L+N+  ++K 
Sbjct: 124 QIMHRDVKPSNILVNSRGEIKL 145

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 39.4 bits (92), Expect = 8e-05
 Identities = 15/26 (57%), Positives = 20/26 (76%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLL 73
           +I   ++Y+HS  VLHRDLKP N+LL
Sbjct: 121 KICATIEYVHSKGVLHRDLKPDNILL 146

Length = 932

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 39.2 bits (91), Expect = 8e-05
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 5/47 (10%)

Query: 40  DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-----CDLKF 81
           + +  ++YQ+++ + + H  +++HRD+KP NLL++       CD  F
Sbjct: 100 EKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGF 146

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 14/39 (35%), Positives = 26/39 (66%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
            LS +   ++  ++L  L+Y+H   +++RDLKP N+LL+
Sbjct: 99  CLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH 137

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 13  RHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 72
           RH  +E+       +D     Y  L      +   QI  G+KY+ S N +HRDL   N L
Sbjct: 112 RHEPQEAAEK----ADVVTISYSTL-----IFMATQIASGMKYLSSLNFVHRDLATRNCL 162

Query: 73  LNTTCDLK 80
           +     +K
Sbjct: 163 VGKNYTIK 170

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 30  HRTKYQR---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           H+ K Q+   L  + +  +  QI   L+Y+H  ++LHRDLK  N+ L  T  +K
Sbjct: 89  HKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIK 142

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 7/57 (12%)

Query: 25  EYSDS----HRTKYQR---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           EY D      R   QR    S D I  +  QI  GLK+IH   +LHRD+K  N+ L+
Sbjct: 79  EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)

Query: 25  EYSDS----HRTKYQR---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC 77
           EY D      + K QR      D I  +  Q+  G+++IH   VLHRD+K  N+ L    
Sbjct: 78  EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG 137

Query: 78  DLKF 81
            +K 
Sbjct: 138 KVKL 141

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 15/48 (31%), Positives = 28/48 (58%)

Query: 34  YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           + R++ + I      +LR L Y+H+  V+HRD+K  ++LL +   +K 
Sbjct: 112 HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKL 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           Q+L  + YIH   ++HRD+K  N+L+N   D+
Sbjct: 268 QLLSAIDYIHGEGIIHRDIKTENVLVNGPEDI 299

Length = 461

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
             LS   +  F  QI +G++Y+ S   +HRDL   N L+  
Sbjct: 100 STLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE 140

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 72
            D  R   + L+   +  F YQ+ RG++++ S   +HRDL   N+L
Sbjct: 119 PDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
                   +++  ++   +Y+H+  +++RDLKP NLLL++
Sbjct: 89  LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS 128

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 22/31 (70%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           ++  +I  GL+ +H   +++RDLKP N+LL+
Sbjct: 106 FYAAEITCGLEDLHRERIVYRDLKPENILLD 136

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           + H+   Q +    IC+     L+GL Y+HS   +HRD+K  N+LL
Sbjct: 106 EVHKKPLQEVEIAAICH---GALQGLAYLHSHERIHRDIKAGNILL 148

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           YF   +L  L+Y+H+  ++HRDLKP NLL+ +   +K
Sbjct: 106 YFAETVL-ALEYLHNYGIVHRDLKPDNLLITSMGHIK 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           LS   I Y   + L+GL Y+HS   +HRD+K +N+LL
Sbjct: 103 LSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL 139

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 5   QDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHR 64
           Q+ I I   +    SLV F +  +  +    +L +        QI  G+ +I   N +HR
Sbjct: 72  QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLID-----MAAQIAEGMAFIERKNYIHR 126

Query: 65  DLKPSNLLLNTT 76
           DL+ +N+L++ T
Sbjct: 127 DLRAANILVSET 138

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           Q L  L Y+H   ++HRDLK  N+L     D+K 
Sbjct: 111 QTLEALNYLHENKIIHRDLKAGNILFTLDGDIKL 144

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 5   QDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHR 64
           ++ I I      K SL+ F +  D    K  +L +        QI  G+ YI   N +HR
Sbjct: 72  EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVD-----MAAQIADGMAYIERMNYIHR 126

Query: 65  DLKPSNLLL--NTTCDLKFF 82
           DL+ +N+L+  N  C +  F
Sbjct: 127 DLRAANILVGDNLVCKIADF 146

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 10  IEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 69
           +E+R  +  S  S     +        L  D +  F  Q+ +G+ ++ S N +HRD+   
Sbjct: 182 VEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAAR 241

Query: 70  NLLL 73
           N+LL
Sbjct: 242 NVLL 245

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           S R+Y   HR    +++   +  F  QI +G+ Y+ S   +HRDL   N+L+
Sbjct: 94  SLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV 142

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 14/35 (40%), Positives = 24/35 (68%)

Query: 40  DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           +   ++  +IL GL+ +H  N ++RDLKP N+LL+
Sbjct: 102 ERALFYAAEILCGLEDLHRENTVYRDLKPENILLD 136

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
            R +   L+ + +  F YQ+ +G+ ++ S N +HRDL   N+LL
Sbjct: 131 RRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL 174

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 9   TIEIRHSTKESLVSFREYSDS-----HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLH 63
            ++    T + L    EY++      H ++ +  + +   ++  +I+  L+Y+HS +V++
Sbjct: 59  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 118

Query: 64  RDLKPSNLLLNTTCDLK 80
           RD+K  NL+L+    +K
Sbjct: 119 RDIKLENLMLDKDGHIK 135

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 16/47 (34%), Positives = 31/47 (65%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           H  K  R S D   +++ +++  L+++H  ++++RDLKP N+LL+ T
Sbjct: 86  HLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT 132

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           RL+ + I      +L+ L Y+HS  V+HRD+K  ++LL
Sbjct: 113 RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL 150

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 37.0 bits (85), Expect = 5e-04
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 9   TIEIRHSTKESLVSFREYSDS-----HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLH 63
           +++    TK+ L    EY +      H ++ +  S D   ++  +I+  L Y+HS  +++
Sbjct: 59  SLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVY 118

Query: 64  RDLKPSNLLLNTTCDLK 80
           RDLK  NL+L+    +K
Sbjct: 119 RDLKLENLMLDKDGHIK 135

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 49  ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKF 81
           +++GL Y+   + ++HRD+KPSN+L+N+  ++K 
Sbjct: 112 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL 145

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           H  K +R       ++  +I   L ++H   +++RDLK  N+LL+
Sbjct: 86  HIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD 130

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 37.1 bits (86), Expect = 5e-04
 Identities = 14/35 (40%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 47  YQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLK 80
           Y +++GLK++    N++HRD+KP+N+L+N    +K
Sbjct: 109 YAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVK 143

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)

Query: 35  QRLSNDHICYFLYQILRGLKYIH-----SANVLHRDLKPSNLLLNTTCDLK 80
           + +  + I   L Q+L  L   H        VLHRDLKP+N+ L+   ++K
Sbjct: 100 KYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVK 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 36.9 bits (85), Expect = 6e-04
 Identities = 14/32 (43%), Positives = 24/32 (75%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           ++  +I   L Y+HS N+++RDLKP N+LL++
Sbjct: 100 FYAAEIASALGYLHSLNIVYRDLKPENILLDS 131

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 36.9 bits (85), Expect = 6e-04
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 5/58 (8%)

Query: 17  KESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           K SL+ F +  +  +    +L +     F  QI  G+ +I   N +HRDL+ +N+L++
Sbjct: 84  KGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGMAFIEQRNYIHRDLRAANILVS 136

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 36.6 bits (85), Expect = 6e-04
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 42  ICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           +C +  QI  G++Y+ S   +HRDL   N+LL
Sbjct: 99  LCDYAVQIANGMRYLESKRFIHRDLAARNILL 130

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 14/32 (43%), Positives = 24/32 (75%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           ++  +I   L Y+HS N+++RDLKP N+LL++
Sbjct: 100 FYAAEIASALGYLHSINIVYRDLKPENILLDS 131

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           L+   +  F YQ+ RG++++ S N +HRDL   N+LL
Sbjct: 234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 36.6 bits (84), Expect = 7e-04
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 5   QDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHR 64
           ++ I I   + +K SL+ F +       KY RL    +     QI  G+ Y+   N +HR
Sbjct: 72  EEPIYIVTEYMSKGSLLDFLK---GEMGKYLRLP--QLVDMAAQIASGMAYVERMNYVHR 126

Query: 65  DLKPSNLLL--NTTCDLKFF 82
           DL+ +N+L+  N  C +  F
Sbjct: 127 DLRAANILVGENLVCKVADF 146

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 36.3 bits (84), Expect = 8e-04
 Identities = 13/31 (41%), Positives = 24/31 (77%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           ++  QI+ GL+++H   +++RDLKP N+LL+
Sbjct: 99  FYAAQIICGLEHLHQRRIVYRDLKPENVLLD 129

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 36.5 bits (84), Expect = 8e-04
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 25  EYS-DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           EYS D  R   ++++   +    YQ+ RG++Y+ S   +HRDL   N+L+     +K
Sbjct: 121 EYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMK 177

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 36.5 bits (84), Expect = 9e-04
 Identities = 15/45 (33%), Positives = 32/45 (71%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           H +++   S   + ++  +I+ GL+++H+  V++RDLKP+N+LL+
Sbjct: 87  HLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD 131

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 15/45 (33%), Positives = 32/45 (71%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           H +++   S   + ++  +I+ GL+++H+  V++RDLKP+N+LL+
Sbjct: 87  HLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD 131

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           L S R+Y   H+     L+   +  F  QI  G+ Y+HS + +HRDL   N+LL+
Sbjct: 92  LGSLRDYLPKHK-----LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD 141

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 36.4 bits (84), Expect = 0.001
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 31  RTKYQRLSNDHICYFLY-QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF 89
           R K  R   +H    L+ Q+L  + ++HS +++HRD+K +N+LL +   +K    F FS 
Sbjct: 133 RAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK-LGDFGFSK 191

Query: 90  FFHFTVHD 97
            +  TV D
Sbjct: 192 MYAATVSD 199

Length = 496

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 40  DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           D ICY  +Q+ RG++++ S   +HRDL   N+LL+
Sbjct: 175 DLICYS-FQVARGMEFLASRKCIHRDLAARNILLS 208

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 50  LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           L+GL Y+HS N++HRD+K  N+LL     +K 
Sbjct: 135 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKL 166

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 12/26 (46%), Positives = 20/26 (76%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLL 73
           + L+ L+++HS  V+HRD+K  N+LL
Sbjct: 123 ECLQALEFLHSNQVIHRDIKSDNILL 148

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 16  TKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL-- 73
            K SL++F    +      Q L    +     Q+  G+ Y+   N +HRDL   N+L+  
Sbjct: 85  EKGSLLAFLRSPEG-----QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE 139

Query: 74  NTTCDLKFF 82
           +  C +  F
Sbjct: 140 DLVCKVADF 148

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           ++  ++L  L+ +H  NV++RDLKP N+LL+  
Sbjct: 97  FYTAELLCALENLHKFNVIYRDLKPENILLDYQ 129

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 16/55 (29%), Positives = 31/55 (56%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFY 84
           H  + ++L  +H  ++  +I   L Y+H   +++RDLK  N+LL++   +K   Y
Sbjct: 86  HMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 140

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 14/24 (58%), Positives = 20/24 (83%)

Query: 50  LRGLKYIHSANVLHRDLKPSNLLL 73
           L+GL Y+HS N++HRD+K  N+LL
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILL 148

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 13/38 (34%), Positives = 27/38 (71%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           L  + + ++  QI  G+ ++HS ++++RD+KP N+LL+
Sbjct: 92  LEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD 129

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
              D I  +  QI   LK++H   +LHRD+K  N+ L
Sbjct: 98  FPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 134

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 13/46 (28%), Positives = 27/46 (58%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           H  + +        ++  ++   + Y+HS N+++RDLKP N+LL++
Sbjct: 86  HLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS 131

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 14/38 (36%), Positives = 24/38 (63%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           ++  +++  L  IHS   +HRD+KP N+LL+ +  LK 
Sbjct: 146 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKL 183

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 5/65 (7%)

Query: 16  TKESLVSFREYSDS-----HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 70
           TK+ L    EY +      H  +  R       ++  +I+ GL+++H   +++RDLK  N
Sbjct: 67  TKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDN 126

Query: 71  LLLNT 75
           +LL++
Sbjct: 127 VLLDS 131

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 43  CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
            ++   ++ GL+Y+H   +++RDLK  NLLL+T
Sbjct: 104 VFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT 136

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 5   QDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHR 64
           ++ I I   +  K SL+ F +  +  +    +L +     F  QI  G+ YI   N +HR
Sbjct: 73  EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID-----FSAQIAEGMAYIERKNYIHR 127

Query: 65  DLKPSNLLLN 74
           DL+ +N+L++
Sbjct: 128 DLRAANVLVS 137

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 50  LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           L+GL Y+HS N++HRD+K  N+LL     +K 
Sbjct: 131 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKL 162

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 14/31 (45%), Positives = 23/31 (74%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           ++  +I   L Y+HS N+++RDLKP N+LL+
Sbjct: 100 FYAAEIASALGYLHSLNIIYRDLKPENILLD 130

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           F YQ+ +G+ ++ S N +HRDL   N+LL
Sbjct: 219 FSYQVAKGMSFLASKNCIHRDLAARNILL 247

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 16/45 (35%), Positives = 29/45 (64%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           H ++ +  S D   ++  +I+  L Y+HS +V++RDLK  NL+L+
Sbjct: 85  HLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD 129

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 30  HRTKYQRLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           H  K +RL  +   + +  Q+   L+++HS  V+HRD+KP+N+ +  T
Sbjct: 95  HFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT 142

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFF 86
           + L+ L+++HS  V+HRD+K  N+LL     +K   + F
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R +  +LS D +      +  G++Y+   + +HRDL   N L+++T  +K
Sbjct: 91  RQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVK 140

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 11/31 (35%), Positives = 21/31 (67%)

Query: 49  ILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           +LR ++Y+H   ++HRD+K  N+ +N   D+
Sbjct: 191 VLRAIQYLHENRIIHRDIKAENIFINHPGDV 221

Length = 391

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           F+  I  G++Y+ S N +HRDL   N +LN
Sbjct: 118 FMIDIASGMEYLSSKNFIHRDLAARNCMLN 147

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 35.0 bits (81), Expect = 0.003
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           K + +    +    +Q+  G+ Y+ S + +HRDL   N+LL
Sbjct: 88  KRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL 128

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 7/67 (10%)

Query: 15  STKESLVSFREYSDSHRTKYQR-------LSNDHICYFLYQILRGLKYIHSANVLHRDLK 67
           S     V  +  SD    + ++       L+ + +  + +Q+ +G++++ S   +HRDL 
Sbjct: 147 SASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLA 206

Query: 68  PSNLLLN 74
             N+LL+
Sbjct: 207 ARNILLS 213

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 13/33 (39%), Positives = 26/33 (78%), Gaps = 1/33 (3%)

Query: 49  ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLK 80
           ++ GL Y+++ + ++HRD+KPSN+L+N+   +K
Sbjct: 112 VVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIK 144

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 13  RHSTKESLVSF-REYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 71
            +    +L  F ++         Q LS   + +   QI  G+ Y+H   V+H+D+   N 
Sbjct: 89  PYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNC 148

Query: 72  LLNTTCDLK 80
           +++    +K
Sbjct: 149 VIDEELQVK 157

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 5   QDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHR 64
           ++ I I   + +K SL+ F +  +    K   L +        Q+  G+ YI   N +HR
Sbjct: 72  EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVD-----MAAQVAAGMAYIERMNYIHR 126

Query: 65  DLKPSNLLL--NTTCDLKFF 82
           DL+ +N+L+     C +  F
Sbjct: 127 DLRSANILVGDGLVCKIADF 146

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLL 72
           QIL  L  +HS  ++HRD+KP N++
Sbjct: 263 QILFALDGLHSTGIVHRDVKPQNII 287

Length = 566

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 13/41 (31%), Positives = 24/41 (58%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           K   ++  ++   ++Q+  G+KY+   N +HRDL   N+LL
Sbjct: 88  KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL 128

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 16  TKESLVSFREYSDS-----HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 70
           TKE+L    EY +      H     +       ++  +I+ GL+++HS  +++RDLK  N
Sbjct: 67  TKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDN 126

Query: 71  LLLNTTCDLK 80
           +LL+T   +K
Sbjct: 127 ILLDTDGHIK 136

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH 92
           KY   S D   +++ + +  ++ +H    +HRD+KP N+L++    +K    F  S  FH
Sbjct: 94  KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK-LSDFGLSTGFH 152

Query: 93  FTVHD 97
              HD
Sbjct: 153 KQ-HD 156

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           D  R     + + ++  +  QI +G+ Y+    ++HRDL   N+L+ T
Sbjct: 97  DYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT 144

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K    + +   +++ + +  +  IH    +HRD+KP NLLL+    +K
Sbjct: 94  KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIK 141

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTT 76
           K+   S+ H+   ++Q    L Y H+  +++H DLKP N+L+ T+
Sbjct: 224 KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268

Length = 467

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           ++LS   +    YQ+ RG++Y+ S   +HRDL   N+L+
Sbjct: 135 EQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 173

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 14/38 (36%), Positives = 24/38 (63%)

Query: 44  YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           ++  +++  L  IHS  ++HRD+KP N+LL+    LK 
Sbjct: 146 FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKL 183

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 34.7 bits (79), Expect = 0.004
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFF 86
           + L+ L ++HS  V+HRD+K  N+LL     +K   + F
Sbjct: 123 ECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           K + ++  +I   ++Q+  G+KY+   N +HRDL   N+LL T
Sbjct: 88  KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT 130

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 15/55 (27%), Positives = 30/55 (54%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFY 84
           H  + ++L  +H  ++  +I   L ++H   +++RDLK  N+LL+    +K   Y
Sbjct: 86  HMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDY 140

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 34.6 bits (80), Expect = 0.004
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 42  ICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           I + L  +L  L YIHS   +HR +K S++LL
Sbjct: 103 IAFILKDVLNALDYIHSKGFIHRSVKASHILL 134

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 34.7 bits (79), Expect = 0.004
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           Q+L  ++YIH   ++HRD+K  N+ LN  CD
Sbjct: 275 QLLCAVEYIHDKKLIHRDIKLENIFLN--CD 303

Length = 501

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           LS   +  F YQ+  G++++ S N +HRDL   N+L+
Sbjct: 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI 272

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 34.5 bits (79), Expect = 0.004
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 53  LKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L Y+H   ++HRDLKP N+L++    +K
Sbjct: 117 LDYLHRHGIIHRDLKPDNMLISNEGHIK 144

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
KOG0598|consensus	357		99.9
KOG0592|consensus	604		99.9
KOG0575|consensus	592		99.89
KOG0595|consensus	429		99.89
KOG0600|consensus	560		99.89
KOG0616|consensus	355		99.88
KOG0615|consensus	475		99.88
KOG0583|consensus	370		99.87
KOG0661|consensus	538		99.86
KOG0593|consensus	396		99.86
KOG0581|consensus	364		99.85
KOG0694|consensus	694		99.85
KOG0599|consensus	411		99.85
KOG0659|consensus	318		99.85
KOG0611|consensus	668		99.85
KOG0663|consensus	419		99.84
KOG0588|consensus	786		99.84
KOG0605|consensus	550		99.83
KOG0594|consensus	323		99.82
KOG0660|consensus	359		99.81
KOG0585|consensus	576		99.81
KOG0192|consensus	362		99.8
KOG0582|consensus	516		99.79
KOG0197|consensus	468		99.79
KOG0589|consensus	426		99.79
KOG0610|consensus	459		99.78
KOG0198|consensus	313		99.78
KOG0586|consensus	596		99.78
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.77
KOG0591|consensus	375		99.77
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.77
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.77
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.77
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.76
KOG0578|consensus	550		99.76
KOG4717|consensus	864		99.76
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.76
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.76
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.76
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.76
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.76
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.75
KOG0033|consensus	355		99.75
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.75
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.75
PTZ00267	478	NIMA-related protein kinase; Provisional	99.75
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.75
KOG0658|consensus	364		99.75
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.75
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.75
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.75
KOG0608|consensus	1034		99.75
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.75
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.75
KOG0662|consensus	292		99.74
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.74
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.74
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.74
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.74
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.74
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.74
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.74
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.74
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.74
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.74
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.74
KOG1187|consensus	361		99.74
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.74
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.74
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.74
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.74
KOG0597|consensus	808		99.74
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.73
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.73
PHA03212	391	serine/threonine kinase US3; Provisional	99.73
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.73
KOG0032|consensus	382		99.73
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.73
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.73
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.73
KOG0580|consensus	281		99.73
KOG0986|consensus	591		99.72
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.72
KOG0696|consensus	683		99.72
KOG0690|consensus	516		99.72
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.72
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.72
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.72
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.72
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.72
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.72
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.72
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.71
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.71
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.71
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.71
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.7
PHA03211	461	serine/threonine kinase US3; Provisional	99.7
PHA03207	392	serine/threonine kinase US3; Provisional	99.7
KOG4236|consensus	888		99.7
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.7
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.7
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.7
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.7
KOG0604|consensus	400		99.7
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.69
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.69
PHA03210	501	serine/threonine kinase US3; Provisional	99.69
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.68
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.68
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.68
PHA03209	357	serine/threonine kinase US3; Provisional	99.68
KOG4721|consensus	904		99.68
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.68
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.68
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.68
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.67
KOG0193|consensus	678		99.67
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.67
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.67
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.67
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.67
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.67
KOG0695|consensus	593		99.67
KOG0194|consensus	474		99.66
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.66
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.66
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.66
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.66
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.66
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.66
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.66
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.66
KOG0612|consensus	1317		99.65
KOG0607|consensus	463		99.65
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.65
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.65
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.65
PTZ00036	440	glycogen synthase kinase; Provisional	99.65
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.65
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.65
KOG0603|consensus	612		99.65
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.65
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.65
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.65
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.65
KOG0614|consensus	732		99.65
KOG1026|consensus	774		99.65
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.65
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.65
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.65
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.65
KOG1989|consensus	738		99.64
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.64
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.64
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.64
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.64
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.64
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.64
KOG0667|consensus	586		99.64
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.64
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.64
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.64
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.64
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.64
KOG0584|consensus	632		99.64
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.64
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.64
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.64
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.63
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.63
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.63
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.63
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.63
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.63
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.63
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.63
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.63
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.63
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.63
KOG0579|consensus	1187		99.63
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.63
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.63
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.63
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.63
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.63
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.63
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.62
PTZ00283	496	serine/threonine protein kinase; Provisional	99.62
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.62
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.62
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.62
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.62
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.62
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.62
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.62
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.62
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.62
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.62
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.62
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.62
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.62
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.62
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.62
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.62
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.62
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.62
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.62
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.61
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.61
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.61
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.61
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.61
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.61
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.61
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.61
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.61
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.61
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.61
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.61
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.61
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.61
KOG0666|consensus	438		99.61
KOG0668|consensus	338		99.61
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.6
KOG0596|consensus	677		99.6
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.6
KOG0984|consensus	282		99.6
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.6
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.6
PHA02988	283	hypothetical protein; Provisional	99.6
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.6
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.6
KOG1152|consensus	772		99.6
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.6
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.6
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.6
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.6
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.6
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.6
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.6
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.6
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.6
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.6
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.6
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.6
PHA02882	294	putative serine/threonine kinase; Provisional	99.59
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.59
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.59
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.59
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.59
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.59
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.59
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.59
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.59
KOG4279|consensus	1226		99.59
KOG0577|consensus	948		99.59
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.59
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.58
KOG4645|consensus	1509		99.58
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.58
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.58
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.58
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.58
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.58
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.58
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.58
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.58
KOG0200|consensus	609		99.58
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.58
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.58
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.58
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.58
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.57
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.57
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.57
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.57
KOG1094|consensus	807		99.57
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.57
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.57
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.57
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.57
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.57
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.57
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.57
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.57
PLN00009	294	cyclin-dependent kinase A; Provisional	99.57
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.57
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.57
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.57
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.57
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.57
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.56
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.56
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.56
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.56
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.56
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.56
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.56
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.56
PRK09188	365	serine/threonine protein kinase; Provisional	99.56
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.56
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.56
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.56
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.56
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.56
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.56
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.56
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.55
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.55
KOG1035|consensus	1351		99.55
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.55
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.55
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.55
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.55
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.55
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.55
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.55
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.55
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.55
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.55
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.55
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.55
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.54
KOG4250|consensus	732		99.54
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.54
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.54
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.54
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.54
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.54
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.54
KOG1095|consensus	1025		99.54
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.54
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.54
KOG0983|consensus	391		99.54
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.54
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.54
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.54
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.53
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.53
KOG0665|consensus	369		99.53
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.53
KOG1151|consensus	775		99.53
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.53
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.53
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.53
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.53
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.53
KOG0664|consensus	449		99.52
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.52
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.51
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.51
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.51
PTZ00284	467	protein kinase; Provisional	99.51
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.51
KOG1027|consensus	903		99.51
KOG0196|consensus	996		99.5
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.5
KOG0587|consensus	953		99.5
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.5
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.5
KOG4257|consensus	974		99.5
KOG0669|consensus	376		99.5
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.49
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.49
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.49
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.49
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.49
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.49
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.49
KOG0574|consensus	502		99.48
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.48
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.48
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.48
KOG1345|consensus	378		99.48
KOG3653|consensus	534		99.48
PRK12274	218	serine/threonine protein kinase; Provisional	99.48
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.48
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.48
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.47
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.47
PRK10345	210	hypothetical protein; Provisional	99.47
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.47
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.46
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.45
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.45
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.44
KOG4278|consensus	1157		99.43
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.42
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.42
KOG1167|consensus	418		99.42
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.41
KOG1165|consensus	449		99.4
PLN00181	793	protein SPA1-RELATED; Provisional	99.39
smart00090	237	RIO RIO-like kinase.	99.39
KOG0576|consensus	829		99.38
KOG1006|consensus	361		99.36
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.33
KOG0199|consensus	1039		99.33
KOG0201|consensus	467		99.32
KOG4158|consensus	598		99.3
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.27
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.26
KOG1164|consensus	322		99.25
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.25
KOG2052|consensus	513		99.25
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.23
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.22
KOG1163|consensus	341		99.22
PRK14879	211	serine/threonine protein kinase; Provisional	99.2
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.18
KOG1025|consensus	1177		99.18
KOG0590|consensus	601		99.18
KOG2345|consensus	302		99.17
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.17
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.13
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.11
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.09
KOG0671|consensus	415		99.07
KOG0670|consensus	752		99.06
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.02
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.0
KOG0603|consensus	612		98.89
KOG1166|consensus	974		98.89
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.86
KOG1024|consensus	563		98.82
KOG1290|consensus	590		98.7
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.6
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.56
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.54
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.5
KOG3087|consensus	229		98.48
KOG1240|consensus	1431		98.44
KOG1243|consensus	690		98.43
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.39
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.36
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.33
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.3
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.29
KOG1023|consensus	484		98.15
KOG0590|consensus	601		98.14
KOG0606|consensus	1205		97.95
KOG0601|consensus	524		97.89
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.85
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.73
PRK09902	216	hypothetical protein; Provisional	97.67
KOG3741|consensus	655		97.67
KOG1033|consensus	516		97.45
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.34
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.27
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	97.27
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.09
KOG0195|consensus	448		96.87
KOG0601|consensus	524		96.75
KOG1235|consensus	538		96.6
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.54
KOG1266|consensus	458		96.51
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.93
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.81
PRK05231	319	homoserine kinase; Provisional	95.75
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	95.55
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.53
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.42
PRK10271	188	thiK thiamine kinase; Provisional	95.41
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	95.36
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.27
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.22
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	95.17
COG2334	331	Putative homoserine kinase type II (protein kinase	95.16
PF01636	239	APH: Phosphotransferase enzyme family This family	95.15
COG4248	637	Uncharacterized protein with protein kinase and he	95.08
KOG2137|consensus	700		95.0
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	94.98
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	94.81
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.75
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	94.4
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.22
PLN02236	344	choline kinase	94.21
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	93.32
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	93.22
PRK06148	1013	hypothetical protein; Provisional	93.18
KOG2268|consensus	465		92.99
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	92.6
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	92.51
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	92.34
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	92.2
PRK06149	972	hypothetical protein; Provisional	91.64
PRK11768	325	serine/threonine protein kinase; Provisional	91.61
PRK09550	401	mtnK methylthioribose kinase; Reviewed	89.72
KOG0606|consensus	1205		89.4
PHA03111	444	Ser/Thr kinase; Provisional	88.6
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	87.98
PTZ00296	442	choline kinase; Provisional	84.52
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	83.26
PLN02876	822	acyl-CoA dehydrogenase	83.21
KOG2464|consensus	246		82.29
PRK12396	409	5-methylribose kinase; Reviewed	80.84

>KOG0598|consensus

Probab=99.90  E-value=7.3e-24  Score=131.86  Aligned_cols=91  Identities=26%  Similarity=0.388  Sum_probs=83.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccc-----ccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDS-----HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .||++|.+...|++++.+++++++...     +..+++.|+|..+..|+++++.|+.|+|+.+|+|||+||+|||++..|
T Consensus        83 ~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G  162 (357)
T KOG0598|consen   83 KHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG  162 (357)
T ss_pred             CCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC
Confidence            699999999999999999999998654     445678999999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++||||++.....
T Consensus       163 Hi~LtDFgL~k~~~~~  178 (357)
T KOG0598|consen  163 HIKLTDFGLCKEDLKD  178 (357)
T ss_pred             cEEEeccccchhcccC
Confidence            9999999999954433

>KOG0592|consensus

Probab=99.90  E-value=1.8e-23  Score=135.53  Aligned_cols=94  Identities=26%  Similarity=0.404  Sum_probs=85.1

Q ss_pred             CCcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           1 MGFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      |..||.++.++..|++...||.++++.....+     +.+.|++..+..|+.+++.|++|+|.+||||||+||+|||++.
T Consensus       130 L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~  209 (604)
T KOG0592|consen  130 LSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK  209 (604)
T ss_pred             hhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC
Confidence            35799999999999999999999999654322     4488999999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCcc
Q psy7276          76 TCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~~   94 (101)
                      +++++|+|||-++.+.+..
T Consensus       210 dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  210 DGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             CCcEEEeeccccccCChhh
Confidence            9999999999999887653

>KOG0575|consensus

Probab=99.89  E-value=3.9e-23  Score=135.03  Aligned_cols=93  Identities=26%  Similarity=0.324  Sum_probs=84.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||||.++..|++...+++++|.|.....     ..+.+.|..+..++.||+.|+.|+|+++|+|||||..|++++++.
T Consensus        76 ~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~  155 (592)
T KOG0575|consen   76 KHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM  155 (592)
T ss_pred             CCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC
Confidence            699999999999999999999999875433     236799999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCccc
Q psy7276          78 DLKFFFYFFFSFFFHFTV   95 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~~~   95 (101)
                      ++||+|||||..+.++.+
T Consensus       156 ~VKIgDFGLAt~le~~~E  173 (592)
T KOG0575|consen  156 NVKIGDFGLATQLEYDGE  173 (592)
T ss_pred             cEEecccceeeeecCccc
Confidence            999999999998886643

>KOG0595|consensus

Probab=99.89  E-value=9.1e-23  Score=128.58  Aligned_cols=92  Identities=27%  Similarity=0.383  Sum_probs=82.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-   76 (101)
                      .|||+|.++.+...++.++++||||....+     ..+.++|..+..++.|++.|++++|+++|+|||+||+|||+... 
T Consensus        67 ~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~  146 (429)
T KOG0595|consen   67 KHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTA  146 (429)
T ss_pred             CCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCC
Confidence            599999999999999999999999875332     33689999999999999999999999999999999999999775 


Q ss_pred             -----CCeEEEeeceeccccCcc
Q psy7276          77 -----CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 -----~~~~i~dfgl~~~~~~~~   94 (101)
                           -.+||+|||+|+.+.++.
T Consensus       147 ~~~~~~~LKIADFGfAR~L~~~~  169 (429)
T KOG0595|consen  147 RNDTSPVLKIADFGFARFLQPGS  169 (429)
T ss_pred             CCCCCceEEecccchhhhCCchh
Confidence                 348999999999887664

>KOG0600|consensus

Probab=99.89  E-value=1.3e-22  Score=130.73  Aligned_cols=96  Identities=28%  Similarity=0.375  Sum_probs=81.7

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccc---cccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSH---RTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .||||+.+...-..  .+++|++++|.+..   ....  -.|++.++..++.|++.|+.|||.++++|||+|..|||++.
T Consensus       174 ~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn  253 (560)
T KOG0600|consen  174 DHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN  253 (560)
T ss_pred             CCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcC
Confidence            69999999765554  48999888885443   3333  36999999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCcccccc
Q psy7276          76 TCDLKFFFYFFFSFFFHFTVHDV   98 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~~~~~~   98 (101)
                      +|.+||+|||||+++.+.....-
T Consensus       254 ~G~LKiaDFGLAr~y~~~~~~~~  276 (560)
T KOG0600|consen  254 NGVLKIADFGLARFYTPSGSAPY  276 (560)
T ss_pred             CCCEEeccccceeeccCCCCccc
Confidence            99999999999999888765433

>KOG0616|consensus

Probab=99.88  E-value=3.3e-22  Score=122.25  Aligned_cols=90  Identities=27%  Similarity=0.358  Sum_probs=81.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc-----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH-----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .||+++.++..+.....++++|++....     ..+.++|+++.+..+++|++.|++|+|.++|++||+||+|+|++.+|
T Consensus       102 ~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G  181 (355)
T KOG0616|consen  102 SHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG  181 (355)
T ss_pred             cCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC
Confidence            5899999999999999999999996543     23447899999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .+||+|||+|+....
T Consensus       182 ~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  182 HIKITDFGFAKRVSG  196 (355)
T ss_pred             cEEEEeccceEEecC
Confidence            999999999987543

>KOG0615|consensus

Probab=99.88  E-value=3e-22  Score=126.65  Aligned_cols=91  Identities=26%  Similarity=0.346  Sum_probs=79.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-   76 (101)
                      .|||||.+...|....+.|+++|+.....+     .++.+.+.....++.|++.|+.|+|++||+|||+||+|||+..+ 
T Consensus       234 ~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~  313 (475)
T KOG0615|consen  234 SHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA  313 (475)
T ss_pred             CCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC
Confidence            699999999999999999999999655433     33667888889999999999999999999999999999999766 


Q ss_pred             --CCeEEEeeceeccccCc
Q psy7276          77 --CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 --~~~~i~dfgl~~~~~~~   93 (101)
                        ..+||+|||+|+.....
T Consensus       314 e~~llKItDFGlAK~~g~~  332 (475)
T KOG0615|consen  314 EDCLLKITDFGLAKVSGEG  332 (475)
T ss_pred             cceEEEecccchhhccccc
Confidence              56999999999977544

>KOG0583|consensus

Probab=99.87  E-value=1.4e-21  Score=124.79  Aligned_cols=88  Identities=26%  Similarity=0.389  Sum_probs=80.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-   76 (101)
                      .||||+.+...+.+...++.+||++....+     +.+++.|..+..++.|++.|++|||++||+|||+|++|++++.+ 
T Consensus        78 ~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~  157 (370)
T KOG0583|consen   78 SHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE  157 (370)
T ss_pred             cCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC
Confidence            399999999999999999999999765222     34789999999999999999999999999999999999999999 


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +++||+|||++...
T Consensus       158 ~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen  158 GNLKLSDFGLSAIS  171 (370)
T ss_pred             CCEEEecccccccc
Confidence            99999999999977

>KOG0661|consensus

Probab=99.86  E-value=2e-22  Score=129.22  Aligned_cols=99  Identities=25%  Similarity=0.303  Sum_probs=84.9

Q ss_pred             cccceeEEEEEeeCCC-ceEEEeeccccc-----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKE-SLVSFREYSDSH-----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~-~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      -|||++.+...+.++. .++.++|+.+-.     ..+...|++..+..|+.|++.|+.|+|.+|++|||+||+|||+...
T Consensus        67 ~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~  146 (538)
T KOG0661|consen   67 PHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGN  146 (538)
T ss_pred             CCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEeccc
Confidence            4999999999998887 888998874321     1134679999999999999999999999999999999999999988


Q ss_pred             CCeEEEeeceeccccCcccc---ccccC
Q psy7276          77 CDLKFFFYFFFSFFFHFTVH---DVTKK  101 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~~~---~~~~~  101 (101)
                      ..+||+|||+|+.....++|   -.|||
T Consensus       147 ~~iKiaDFGLARev~SkpPYTeYVSTRW  174 (538)
T KOG0661|consen  147 DVIKIADFGLAREVRSKPPYTEYVSTRW  174 (538)
T ss_pred             ceeEecccccccccccCCCcchhhhccc
Confidence            99999999999998887554   45555

>KOG0593|consensus

Probab=99.86  E-value=1e-22  Score=125.06  Aligned_cols=91  Identities=23%  Similarity=0.371  Sum_probs=83.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccc-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||+|.++..|-....++++.|+++...+..     ..+++..+..+..|++.|+.|||+++++|||+||+|||+..++
T Consensus        59 kH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g  138 (396)
T KOG0593|consen   59 KHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG  138 (396)
T ss_pred             ccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC
Confidence            59999999999999999999999988754432     4688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc-Cc
Q psy7276          78 DLKFFFYFFFSFFF-HF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~-~~   93 (101)
                      .+|++|||+|+.+. |+
T Consensus       139 vvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen  139 VVKLCDFGFARTLSAPG  155 (396)
T ss_pred             cEEeccchhhHhhcCCc
Confidence            99999999999887 54

>KOG0581|consensus

Probab=99.85  E-value=3.3e-21  Score=120.22  Aligned_cols=92  Identities=23%  Similarity=0.335  Sum_probs=81.9

Q ss_pred             CcccceeEEEEEeeCCCc-eEEEeecccccccc-----ccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRHSTKES-LVSFREYSDSHRTK-----YQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~   74 (101)
                      +.||++|.+++.|..++. +.+.|||.+...+.     .++++|.....++.+++.|+.|+|. ..|+|||+||+|+|++
T Consensus       134 ~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN  213 (364)
T KOG0581|consen  134 CQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN  213 (364)
T ss_pred             CCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec
Confidence            579999999999999996 99999997664442     2669999999999999999999995 8999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      ..|.+||+|||++..+.+.
T Consensus       214 skGeVKicDFGVS~~lvnS  232 (364)
T KOG0581|consen  214 SKGEVKICDFGVSGILVNS  232 (364)
T ss_pred             cCCCEEeccccccHHhhhh
Confidence            9999999999998876554

>KOG0694|consensus

Probab=99.85  E-value=4.7e-21  Score=126.86  Aligned_cols=90  Identities=24%  Similarity=0.328  Sum_probs=81.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccc----ccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDS----HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..||.++.++.+|++...++.+|||...    +..+.+.|+++.+..|+++++.|++|+|+++|++||+|.+|+|++.+|
T Consensus       426 ~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG  505 (694)
T KOG0694|consen  426 NRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG  505 (694)
T ss_pred             ccCCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC
Confidence            3699999999999999999999999433    344557899999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .+||+|||+++.-.
T Consensus       506 h~kiADFGlcKe~m  519 (694)
T KOG0694|consen  506 HVKIADFGLCKEGM  519 (694)
T ss_pred             cEEecccccccccC
Confidence            99999999999644

>KOG0599|consensus

Probab=99.85  E-value=2.2e-21  Score=118.31  Aligned_cols=93  Identities=22%  Similarity=0.275  Sum_probs=82.6

Q ss_pred             CCcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           1 MGFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      +++||+|+.+.+.|+++..++.+.+.+....+     ..-.++++.+..++.|+..|+.|+|.++|+|||+||+|||+++
T Consensus        79 v~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd  158 (411)
T KOG0599|consen   79 VMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD  158 (411)
T ss_pred             hcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc
Confidence            36899999999999999999998887554322     2245889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      +.+++|+|||++..+.++
T Consensus       159 n~~i~isDFGFa~~l~~G  176 (411)
T KOG0599|consen  159 NMNIKISDFGFACQLEPG  176 (411)
T ss_pred             ccceEEeccceeeccCCc
Confidence            999999999999988776

>KOG0659|consensus

Probab=99.85  E-value=3.3e-21  Score=116.50  Aligned_cols=91  Identities=32%  Similarity=0.387  Sum_probs=81.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.++..|...+.+.+++|+......     +.-.++..++..|+.+++.|+.|||++.|+|||+||.|+|++.+|
T Consensus        59 ~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g  138 (318)
T KOG0659|consen   59 KHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG  138 (318)
T ss_pred             cCcchhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC
Confidence            599999999999999999999998554322     224588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .+||+|||+++.+.+.
T Consensus       139 ~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen  139 QLKIADFGLARFFGSP  154 (318)
T ss_pred             cEEeecccchhccCCC
Confidence            9999999999988755

>KOG0611|consensus

Probab=99.85  E-value=2.9e-21  Score=123.04  Aligned_cols=91  Identities=26%  Similarity=0.361  Sum_probs=81.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      -.||+|+.++..|++.+.+.++|+|.....+     ..+.+++..+..+++|+.+|+.|||.++++|||||.+|||++.+
T Consensus       110 LNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N  189 (668)
T KOG0611|consen  110 LNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQN  189 (668)
T ss_pred             cCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCC
Confidence            3799999999999999999999999654322     33679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +++||+||||+..+..
T Consensus       190 ~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  190 NNIKIADFGLSNLYAD  205 (668)
T ss_pred             CCeeeeccchhhhhcc
Confidence            9999999999876543

>KOG0663|consensus

Probab=99.84  E-value=4.5e-21  Score=119.06  Aligned_cols=92  Identities=27%  Similarity=0.321  Sum_probs=79.4

Q ss_pred             CcccceeEEEEEe--eCCCceEEEeeccccccc---cc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRH--STKESLVSFREYSDSHRT---KY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~--~~~~~l~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      +.|||||.+...-  .+..+++++|+++.....   ..  .+|....+..++.|++.|++|+|.+.|+|||||++|+|+.
T Consensus       132 ~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~  211 (419)
T KOG0663|consen  132 ARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS  211 (419)
T ss_pred             cCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec
Confidence            4699999996544  466889999999765332   11  5799999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      ..|.+||+|||+|+.++..
T Consensus       212 ~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  212 HKGILKIADFGLAREYGSP  230 (419)
T ss_pred             cCCcEEecccchhhhhcCC
Confidence            9999999999999987664

>KOG0588|consensus

Probab=99.84  E-value=6e-21  Score=126.41  Aligned_cols=92  Identities=28%  Similarity=0.351  Sum_probs=83.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc-----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH-----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..|+++..++.++||....     ....+++.+..+..++.|++.|+.|||..+|+|||+||+|+|++..+
T Consensus        70 ~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~  149 (786)
T KOG0588|consen   70 EHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN  149 (786)
T ss_pred             cCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc
Confidence            5999999999999999999999996543     23558899999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCcc
Q psy7276          78 DLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~~   94 (101)
                      ++||+|||+|....++.
T Consensus       150 nIKIADFGMAsLe~~gk  166 (786)
T KOG0588|consen  150 NIKIADFGMASLEVPGK  166 (786)
T ss_pred             CEeeeccceeecccCCc
Confidence            99999999988665553

>KOG0605|consensus

Probab=99.83  E-value=4.4e-20  Score=119.67  Aligned_cols=89  Identities=20%  Similarity=0.281  Sum_probs=79.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccc-----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSH-----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +..|.+|.++-.|++...|+++|||..+.     ....+.+++..+..|+.+++.|++.+|+.|++|||+||+|+|++..
T Consensus       198 ~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~  277 (550)
T KOG0605|consen  198 VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAK  277 (550)
T ss_pred             cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCC
Confidence            35789999999999999999999995432     2244779999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      |.+|++|||||.-+
T Consensus       278 GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  278 GHIKLSDFGLSTGL  291 (550)
T ss_pred             CCEeeccccccchh
Confidence            99999999998644

>KOG0594|consensus

Probab=99.82  E-value=8.7e-20  Score=113.25  Aligned_cols=89  Identities=33%  Similarity=0.434  Sum_probs=74.3

Q ss_pred             cccc-eeEEEEEeeCCC------ceEEEeeccccccc---cc-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQD-QITIEIRHSTKE------SLVSFREYSDSHRT---KY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~-~~~~~~~~~~~~------~l~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|+| ++.+...+.+..      .++.++++.+....   ..     ...+...+..++.|++.|+.|||+++|+|||+|
T Consensus        68 ~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLK  147 (323)
T KOG0594|consen   68 SHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLK  147 (323)
T ss_pred             CCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCC
Confidence            5788 999999988766      78788777443222   11     246677899999999999999999999999999


Q ss_pred             CCCeEEeeCCCeEEEeeceecccc
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      |+|++++..|.+||+|||+|+...
T Consensus       148 PQNlLi~~~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen  148 PQNLLISSSGVLKLADFGLARAFS  171 (323)
T ss_pred             cceEEECCCCcEeeeccchHHHhc
Confidence            999999999999999999998655

>KOG0660|consensus

Probab=99.81  E-value=6.1e-20  Score=114.34  Aligned_cols=99  Identities=45%  Similarity=0.602  Sum_probs=81.1

Q ss_pred             cccceeEEEEEeeC-----CCceEEEeecc---ccccccccC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHST-----KESLVSFREYS---DSHRTKYQR-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-----~~~l~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|+|++.+...+..     -.+++.+.+..   +....+.+. +++..+..++.|++.|+.|+|+.+++||||||.|+++
T Consensus        79 ~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~  158 (359)
T KOG0660|consen   79 RHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL  158 (359)
T ss_pred             cCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee
Confidence            49999999887754     46677777664   333334444 8999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC-----c-cccccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH-----F-TVHDVTKK  101 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~-----~-~~~~~~~~  101 (101)
                      +.++.+||+|||+|+...+     . ..|-.|||
T Consensus       159 n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRW  192 (359)
T KOG0660|consen  159 NADCDLKICDFGLARYLDKFFEDGFMTEYVATRW  192 (359)
T ss_pred             ccCCCEEeccccceeeccccCcccchhcceeeee
Confidence            9999999999999998853     2 45556665

>KOG0585|consensus

Probab=99.81  E-value=3.3e-19  Score=114.80  Aligned_cols=91  Identities=26%  Similarity=0.412  Sum_probs=78.3

Q ss_pred             CcccceeEEEEEeeC--CCceEEEeeccccccccc----cC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRHST--KESLVSFREYSDSHRTKY----QR-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      ..|||+|.++...-.  ...+|++++++......+    .. +++.++..|+..++.|++|+|.++|+|||+||.|+|++
T Consensus       165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~  244 (576)
T KOG0585|consen  165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS  244 (576)
T ss_pred             cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc
Confidence            369999999988864  567999999977544433    23 78899999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .+|.+||+|||++.....
T Consensus       245 ~~g~VKIsDFGVs~~~~~  262 (576)
T KOG0585|consen  245 SDGTVKISDFGVSNEFPQ  262 (576)
T ss_pred             CCCcEEeeccceeeeccc
Confidence            999999999999886633

>KOG0192|consensus

Probab=99.80  E-value=4.7e-19  Score=112.84  Aligned_cols=91  Identities=23%  Similarity=0.277  Sum_probs=79.7

Q ss_pred             CcccceeEEEEEeeCCC-ceEEEeecccccc----c---cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKE-SLVSFREYSDSHR----T---KYQRLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~-~l~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~-i~~~~lk~~nil   72 (101)
                      -.|||+|.+++.+..+. .+.+++|+.....    .   ....++...+..++.+++.|+.|+|.++ |+|+|||++|+|
T Consensus        96 l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiL  175 (362)
T KOG0192|consen   96 LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNIL  175 (362)
T ss_pred             CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEE
Confidence            37999999999999887 7999999854322    2   2467899999999999999999999999 999999999999


Q ss_pred             EeeCC-CeEEEeeceeccccC
Q psy7276          73 LNTTC-DLKFFFYFFFSFFFH   92 (101)
Q Consensus        73 ~~~~~-~~~i~dfgl~~~~~~   92 (101)
                      ++.+. .+||+|||+++....
T Consensus       176 v~~~~~~~KI~DFGlsr~~~~  196 (362)
T KOG0192|consen  176 VDLKGKTLKIADFGLSREKVI  196 (362)
T ss_pred             EcCCCCEEEECCCccceeecc
Confidence            99997 999999999986654

>KOG0582|consensus

Probab=99.79  E-value=7.9e-19  Score=112.28  Aligned_cols=93  Identities=19%  Similarity=0.277  Sum_probs=80.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      ..|||++.++.+|.....++.+|.+.-....       ....+.|..+..++++++.|+.|+|++|-+|||+|+.|||++
T Consensus        81 ~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~  160 (516)
T KOG0582|consen   81 IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID  160 (516)
T ss_pred             cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc
Confidence            5799999999999999999999987432111       124589999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCcc
Q psy7276          75 TTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~~   94 (101)
                      .+|.++|+|||++-.+..+.
T Consensus       161 ~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  161 SDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             CCCcEEEcCceeeeeecccC
Confidence            99999999999887766554

>KOG0197|consensus

Probab=99.79  E-value=7.2e-19  Score=113.59  Aligned_cols=87  Identities=22%  Similarity=0.282  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----ccc---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RTK---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+++|.++..+...+.+++++|+..+.    .++   ...+..+....++.||++|+.|+.+++++||||..+|||++.
T Consensus       259 ~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~  338 (468)
T KOG0197|consen  259 RHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE  338 (468)
T ss_pred             cccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc
Confidence            6999999999999999999999985443    222   245788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecc
Q psy7276          76 TCDLKFFFYFFFSF   89 (101)
Q Consensus        76 ~~~~~i~dfgl~~~   89 (101)
                      +..+||+||||++.
T Consensus       339 ~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  339 DLVVKISDFGLARL  352 (468)
T ss_pred             CceEEEcccccccc
Confidence            99999999999993

>KOG0589|consensus

Probab=99.79  E-value=2e-19  Score=115.40  Aligned_cols=93  Identities=23%  Similarity=0.294  Sum_probs=83.7

Q ss_pred             CcccceeEEEEEeeCCCc-eEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           2 GFHQDQITIEIRHSTKES-LVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~-l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      ..|||||.+...|+.++. ++++|+|++....       +..-|+++.++.|+.|++.|+.|||++.|+|||+|+.||++
T Consensus        60 ~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl  139 (426)
T KOG0589|consen   60 LLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL  139 (426)
T ss_pred             ccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc
Confidence            369999999999999999 9999999875432       12348999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccCcc
Q psy7276          74 NTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      ..++.+++.|||+|+.+++..
T Consensus       140 tk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen  140 TKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             cccCceeecchhhhhhcCCch
Confidence            999999999999999998875

>KOG0610|consensus

Probab=99.78  E-value=1e-18  Score=110.82  Aligned_cols=90  Identities=20%  Similarity=0.248  Sum_probs=81.7

Q ss_pred             CCcccceeEEEEEeeCCCceEEEeeccccc-------cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           1 MGFHQDQITIEIRHSTKESLVSFREYSDSH-------RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      |..||.+..++..|++....+.+||||...       .+..+.|+++.+..|+++++-|++|+|-.||++|||||+|||+
T Consensus       133 ~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv  212 (459)
T KOG0610|consen  133 LLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV  212 (459)
T ss_pred             hcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE
Confidence            457999999999999999999999998653       2233679999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccc
Q psy7276          74 NTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~   90 (101)
                      .++|.+-++||-|+...
T Consensus       213 redGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  213 REDGHIMLSDFDLSLRC  229 (459)
T ss_pred             ecCCcEEeeeccccccC
Confidence            99999999999988765

>KOG0198|consensus

Probab=99.78  E-value=1.1e-18  Score=108.95  Aligned_cols=90  Identities=28%  Similarity=0.436  Sum_probs=76.4

Q ss_pred             cccceeEEEEEeeCCC--ceEEEeeccccccc-----ccc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE--SLVSFREYSDSHRT-----KYQ-RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~--~l~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||||...+......  .+.++|||.....+     +.+ ++++..+..+..|++.|+.|+|+++++|+|+|++|+|++
T Consensus        72 ~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~  151 (313)
T KOG0198|consen   72 NHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD  151 (313)
T ss_pred             CCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe
Confidence            3899999998765555  58899999654322     223 689999999999999999999999999999999999999


Q ss_pred             e-CCCeEEEeeceeccccC
Q psy7276          75 T-TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~-~~~~~i~dfgl~~~~~~   92 (101)
                      . ++.+||+|||+++....
T Consensus       152 ~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen  152 PSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             CCCCeEEeccCcccccccc
Confidence            9 79999999999887663

>KOG0586|consensus

Probab=99.78  E-value=6.1e-19  Score=115.72  Aligned_cols=93  Identities=27%  Similarity=0.341  Sum_probs=83.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      -.|||||+++.+.++...++.++++......     +.++..+..+...+.|+++|++|||++.++|+|||.+|++++.+
T Consensus       112 l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~  191 (596)
T KOG0586|consen  112 LNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN  191 (596)
T ss_pred             cCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc
Confidence            3699999999999999999999999765432     33667788889999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCcc
Q psy7276          77 CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~   94 (101)
                      .++||+|||++.++..+.
T Consensus       192 mnikIaDfgfS~~~~~~~  209 (596)
T KOG0586|consen  192 MNIKIADFGFSTFFDYGL  209 (596)
T ss_pred             cceeeeccccceeecccc
Confidence            999999999999887653

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=2.7e-18  Score=108.12  Aligned_cols=89  Identities=20%  Similarity=0.325  Sum_probs=78.9

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccc-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHR-----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.+...+.....++.++++.....     ...+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        53 ~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~  132 (330)
T cd05586          53 DESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT  132 (330)
T ss_pred             CCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence            479999999999999999999999864422     234568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       133 ~~~kl~Dfg~a~~~  146 (330)
T cd05586         133 GHIALCDFGLSKAN  146 (330)
T ss_pred             CCEEEecCCcCcCC
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0591|consensus

Probab=99.77  E-value=3.9e-20  Score=112.96  Aligned_cols=93  Identities=23%  Similarity=0.282  Sum_probs=77.0

Q ss_pred             cccceeEEEE-EeeC-CCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHH--CC--ceeccCC
Q psy7276           3 FHQDQITIEI-RHST-KESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHS--AN--VLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~-~~~~-~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~--~~--i~~~~lk   67 (101)
                      .|||||.++. .+.. +..+.++||++....+         +...++|+.++.++.|++.|+..||.  ..  ++|||+|
T Consensus        76 ~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIK  155 (375)
T KOG0591|consen   76 NHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIK  155 (375)
T ss_pred             CCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCc
Confidence            6999999876 5554 4558899998654322         22568999999999999999999998  34  8999999


Q ss_pred             CCCeEEeeCCCeEEEeeceeccccCccc
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFFFHFTV   95 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~~~~~~   95 (101)
                      |.||+++.+|.+|++||||++.+.....
T Consensus       156 PaNIFl~~~gvvKLGDfGL~r~l~s~~t  183 (375)
T KOG0591|consen  156 PANIFLTANGVVKLGDFGLGRFLSSKTT  183 (375)
T ss_pred             chheEEcCCCceeeccchhHhHhcchhH
Confidence            9999999999999999999998876543

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.77  E-value=3.1e-18  Score=109.56  Aligned_cols=90  Identities=19%  Similarity=0.214  Sum_probs=79.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..|||++.++..+..+..++.++|++...    ......+++..+..++.|++.|+.++|+++++|+|+||+||+++.++
T Consensus       100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~  179 (370)
T cd05621         100 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG  179 (370)
T ss_pred             CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC
Confidence            46999999999999999999999986542    22334678889999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       180 ~~kL~DFG~a~~~~  193 (370)
T cd05621         180 HLKLADFGTCMKMD  193 (370)
T ss_pred             CEEEEecccceecc
Confidence            99999999988654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.77  E-value=2.6e-18  Score=109.46  Aligned_cols=90  Identities=19%  Similarity=0.265  Sum_probs=79.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.++..+.....+++++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        58 ~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~  137 (363)
T cd05628          58 ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK  137 (363)
T ss_pred             CCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC
Confidence            3689999999999999999999998654221     33568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||+++.+.
T Consensus       138 ~~vkL~DFGla~~~~  152 (363)
T cd05628         138 GHVKLSDFGLCTGLK  152 (363)
T ss_pred             CCEEEeeccCccccc
Confidence            999999999987653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.77  E-value=3.5e-18  Score=107.42  Aligned_cols=88  Identities=24%  Similarity=0.326  Sum_probs=78.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+..++.++.++++.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.++
T Consensus        53 ~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~  132 (323)
T cd05571          53 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG  132 (323)
T ss_pred             CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC
Confidence            599999999999999999999998654322     335688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       133 ~~kl~DfG~a~~~  145 (323)
T cd05571         133 HIKITDFGLCKEG  145 (323)
T ss_pred             CEEEeeCCCCccc
Confidence            9999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=4.8e-18  Score=108.68  Aligned_cols=89  Identities=18%  Similarity=0.309  Sum_probs=78.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.++..++.++|++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.+
T Consensus        58 l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~  137 (377)
T cd05629          58 SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRG  137 (377)
T ss_pred             CCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC
Confidence            3699999999999999999999998643222     23568889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||+++.+
T Consensus       138 ~~~kl~DfGla~~~  151 (377)
T cd05629         138 GHIKLSDFGLSTGF  151 (377)
T ss_pred             CCEEEeeccccccc
Confidence            99999999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0578|consensus

Probab=99.76  E-value=1e-18  Score=113.87  Aligned_cols=92  Identities=23%  Similarity=0.364  Sum_probs=79.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|+|+|.+...|..++.++.+|||.....+    ....++|.+...+..+++.|+.|+|.++|+|||+|.+||+++.+|.
T Consensus       328 ~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~  407 (550)
T KOG0578|consen  328 HHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS  407 (550)
T ss_pred             cchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc
Confidence            589999988888888888888888554333    2245889999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCcc
Q psy7276          79 LKFFFYFFFSFFFHFT   94 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~~   94 (101)
                      +||+|||++..+....
T Consensus       408 vKltDFGFcaqi~~~~  423 (550)
T KOG0578|consen  408 VKLTDFGFCAQISEEQ  423 (550)
T ss_pred             EEEeeeeeeecccccc
Confidence            9999999988776654

>KOG4717|consensus

Probab=99.76  E-value=3.5e-18  Score=111.74  Aligned_cols=95  Identities=23%  Similarity=0.250  Sum_probs=82.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccc------cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSH------RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .+|||||.++...-+.-.+++++|..+..      ......+.|..+..|+.||+.|+.|||+..++||||||+|+++.+
T Consensus        74 VQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE  153 (864)
T KOG4717|consen   74 VQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE  153 (864)
T ss_pred             hcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee
Confidence            58999999999999999999999875442      113356899999999999999999999999999999999998876


Q ss_pred             C-CCeEEEeeceeccccCcccc
Q psy7276          76 T-CDLKFFFYFFFSFFFHFTVH   96 (101)
Q Consensus        76 ~-~~~~i~dfgl~~~~~~~~~~   96 (101)
                      . |-+|+.|||++..+.|+..-
T Consensus       154 KlGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen  154 KLGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             ecCceEeeeccccccCCCcchh
Confidence            5 88999999999999887543

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=6.2e-18  Score=105.80  Aligned_cols=88  Identities=18%  Similarity=0.281  Sum_probs=78.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+|++++.++
T Consensus        51 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~  130 (312)
T cd05585          51 NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG  130 (312)
T ss_pred             CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC
Confidence            599999999999999999999998654322     335688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       131 ~~kl~Dfg~~~~~  143 (312)
T cd05585         131 HIALCDFGLCKLN  143 (312)
T ss_pred             cEEEEECcccccC
Confidence            9999999998753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.76  E-value=5.8e-18  Score=106.43  Aligned_cols=88  Identities=20%  Similarity=0.317  Sum_probs=78.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+...+.++.++++.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.+
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~  132 (325)
T cd05604          53 VKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ  132 (325)
T ss_pred             CCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC
Confidence            3699999999999999999999998654322     33568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       133 ~~~kL~DfG~~~~  145 (325)
T cd05604         133 GHVVLTDFGLCKE  145 (325)
T ss_pred             CCEEEeecCCccc
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.76  E-value=6.9e-18  Score=106.25  Aligned_cols=90  Identities=18%  Similarity=0.280  Sum_probs=78.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.+...+...+.++.+++++....+     ....+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.+
T Consensus        62 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~  141 (332)
T cd05614          62 RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE  141 (332)
T ss_pred             cCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC
Confidence            3589999999999999999999998654222     23568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||++..+.
T Consensus       142 ~~~kl~DfG~~~~~~  156 (332)
T cd05614         142 GHVVLTDFGLSKEFL  156 (332)
T ss_pred             CCEEEeeCcCCcccc
Confidence            999999999987643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.76  E-value=5e-18  Score=107.56  Aligned_cols=89  Identities=26%  Similarity=0.323  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus        89 ~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~  168 (340)
T PTZ00426         89 NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG  168 (340)
T ss_pred             CCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC
Confidence            599999999999999999999998644322     235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       169 ~ikL~DFG~a~~~~  182 (340)
T PTZ00426        169 FIKMTDFGFAKVVD  182 (340)
T ss_pred             CEEEecCCCCeecC
Confidence            99999999987654

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.76  E-value=5.7e-18  Score=106.20  Aligned_cols=89  Identities=22%  Similarity=0.282  Sum_probs=78.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+..++.++.++++.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.+
T Consensus        53 ~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~  132 (316)
T cd05592          53 WEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD  132 (316)
T ss_pred             cCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC
Confidence            4699999999999999999999998644322     23568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       133 ~~~kL~Dfg~a~~~  146 (316)
T cd05592         133 GHIKIADFGMCKEN  146 (316)
T ss_pred             CCEEEccCcCCeEC
Confidence            99999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.75  E-value=7.3e-18  Score=105.83  Aligned_cols=89  Identities=19%  Similarity=0.251  Sum_probs=78.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.+...+..++.++.++|++....+     ....+++..+..++.+++.|+.|+|+.+++|+|++|+|++++.+
T Consensus        53 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~  132 (321)
T cd05591          53 AKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE  132 (321)
T ss_pred             cCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence            3699999999999999999999998654322     33568889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||++...
T Consensus       133 ~~~kL~Dfg~~~~~  146 (321)
T cd05591         133 GHCKLADFGMCKEG  146 (321)
T ss_pred             CCEEEeecccceec
Confidence            99999999988753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0033|consensus

Probab=99.75  E-value=1.8e-18  Score=104.34  Aligned_cols=92  Identities=22%  Similarity=0.216  Sum_probs=78.1

Q ss_pred             CCcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           1 MGFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      |-+||||+.+...+.+.+..+++.+.......     ...-++|..+..+.+|++.|+.|||.++|+|||+||.|+++..
T Consensus        66 ~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLAS  145 (355)
T KOG0033|consen   66 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLAS  145 (355)
T ss_pred             hcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeee
Confidence            45899999999999999999999887544322     1244789999999999999999999999999999999999865


Q ss_pred             C---CCeEEEeeceeccccC
Q psy7276          76 T---CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~---~~~~i~dfgl~~~~~~   92 (101)
                      .   .-+|++|||++.....
T Consensus       146 K~~~A~vKL~~FGvAi~l~~  165 (355)
T KOG0033|consen  146 KAKGAAVKLADFGLAIEVND  165 (355)
T ss_pred             ccCCCceeecccceEEEeCC
Confidence            4   4599999999988763

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.75  E-value=6.3e-18  Score=106.30  Aligned_cols=89  Identities=20%  Similarity=0.295  Sum_probs=78.0

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+...+.++.++|+.....+     ..+.+.+..+..++.|++.|+.++|+.+++|+|+||+||+++.+
T Consensus        53 ~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~  132 (325)
T cd05602          53 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ  132 (325)
T ss_pred             CCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence            3699999999999999999999998654322     23567888888999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       133 ~~~kl~DfG~a~~~  146 (325)
T cd05602         133 GHIVLTDFGLCKEN  146 (325)
T ss_pred             CCEEEccCCCCccc
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.75  E-value=1e-17  Score=107.22  Aligned_cols=91  Identities=19%  Similarity=0.220  Sum_probs=79.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..|||++.++..+..+..++.+++++...    ......+++..+..++.|++.|+.++|+++++|+|+||+|++++.++
T Consensus       100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~  179 (371)
T cd05622         100 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG  179 (371)
T ss_pred             CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC
Confidence            46999999999999999999999986542    22334678888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++.....
T Consensus       180 ~ikL~DfG~a~~~~~  194 (371)
T cd05622         180 HLKLADFGTCMKMNK  194 (371)
T ss_pred             CEEEEeCCceeEcCc
Confidence            999999999876543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.75  E-value=1.5e-17  Score=109.37  Aligned_cols=91  Identities=22%  Similarity=0.273  Sum_probs=79.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      ..|||++.++..+..++.+++++|++....+         ....+++..+..++.|++.|+.++|+++++|+|+||+||+
T Consensus       122 l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIl  201 (478)
T PTZ00267        122 CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIF  201 (478)
T ss_pred             CCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEE
Confidence            3699999999999999999999999654322         1235788889999999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceeccccC
Q psy7276          73 LNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++.++|+|||+++.+..
T Consensus       202 l~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        202 LMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             ECCCCcEEEEeCcCceecCC
Confidence            99999999999999886543

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.75  E-value=1.5e-17  Score=104.63  Aligned_cols=88  Identities=25%  Similarity=0.334  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+...+.+++++|+.....+     ....+++..+..++.|++.|+.|+|+ .+++|+|+||+||+++.+
T Consensus        53 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~  132 (325)
T cd05594          53 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD  132 (325)
T ss_pred             CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCC
Confidence            599999999999999999999998654322     23568899999999999999999997 799999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       133 ~~~kL~Dfg~~~~~  146 (325)
T cd05594         133 GHIKITDFGLCKEG  146 (325)
T ss_pred             CCEEEecCCCCeec
Confidence            99999999988753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0658|consensus

Probab=99.75  E-value=1.3e-18  Score=108.58  Aligned_cols=93  Identities=28%  Similarity=0.364  Sum_probs=73.2

Q ss_pred             CcccceeEEEEEeeCCCc-----eEEEeecccc---cccc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           2 GFHQDQITIEIRHSTKES-----LVSFREYSDS---HRTK-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~-----l~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      -.|||+|.+...|.....     +..++|+...   ...+     ..+++...+..+..|+.+|+.|+|..+|+|||+||
T Consensus        74 l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKP  153 (364)
T KOG0658|consen   74 LDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKP  153 (364)
T ss_pred             cCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCCh
Confidence            479999999888864332     2255565332   2222     34577778888999999999999999999999999


Q ss_pred             CCeEEeeC-CCeEEEeeceeccccCcc
Q psy7276          69 SNLLLNTT-CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        69 ~nil~~~~-~~~~i~dfgl~~~~~~~~   94 (101)
                      +|+|++.+ |.+||+|||-|+.+.++.
T Consensus       154 qNlLvD~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  154 QNLLVDPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             heEEEcCCCCeEEeccCCcceeeccCC
Confidence            99999976 899999999999877663

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.75  E-value=8.1e-18  Score=106.03  Aligned_cols=89  Identities=22%  Similarity=0.330  Sum_probs=78.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus        76 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~  155 (329)
T PTZ00263         76 SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG  155 (329)
T ss_pred             CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC
Confidence            599999999999999999999998654222     335688899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       156 ~~kl~Dfg~~~~~~  169 (329)
T PTZ00263        156 HVKVTDFGFAKKVP  169 (329)
T ss_pred             CEEEeeccCceEcC
Confidence            99999999987654

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.75  E-value=9.1e-18  Score=105.85  Aligned_cols=89  Identities=22%  Similarity=0.324  Sum_probs=78.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.....++.++|+.....+     ..+.+++..+..++.+++.|+.|+|+++++|+|+||+|++++.+
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~  132 (329)
T cd05618          53 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE  132 (329)
T ss_pred             CCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC
Confidence            3699999999999999999999998654322     23568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       133 ~~~kL~DfG~~~~~  146 (329)
T cd05618         133 GHIKLTDYGMCKEG  146 (329)
T ss_pred             CCEEEeeCCccccc
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.75  E-value=7.3e-18  Score=108.00  Aligned_cols=88  Identities=15%  Similarity=0.286  Sum_probs=77.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+..++.++.++|++....+     ..+.+++..+..++.|++.|+.++|+.+++|+|+||+||+++.+
T Consensus        58 ~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~  137 (382)
T cd05625          58 ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD  137 (382)
T ss_pred             CCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            3699999999999999999999998654221     23567889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||++..
T Consensus       138 g~~kL~DFGla~~  150 (382)
T cd05625         138 GHIKLTDFGLCTG  150 (382)
T ss_pred             CCEEEeECCCCcc
Confidence            9999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0608|consensus

Probab=99.75  E-value=9.9e-18  Score=111.68  Aligned_cols=86  Identities=15%  Similarity=0.304  Sum_probs=76.4

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccc-----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSH-----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .+=+|.++..|++.+.||.+|+|....     ..+.+.|.|..+.+|..++.+|+++.|..|.||||+||+|||++.+|.
T Consensus       688 n~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH  767 (1034)
T KOG0608|consen  688 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH  767 (1034)
T ss_pred             CcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc
Confidence            455789999999999999999995442     224578999999999999999999999999999999999999999999


Q ss_pred             eEEEeeceecc
Q psy7276          79 LKFFFYFFFSF   89 (101)
Q Consensus        79 ~~i~dfgl~~~   89 (101)
                      ||++||||+.-
T Consensus       768 IKLTDFGLCTG  778 (1034)
T KOG0608|consen  768 IKLTDFGLCTG  778 (1034)
T ss_pred             eeeeecccccc
Confidence            99999998753

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.75  E-value=8.6e-18  Score=105.65  Aligned_cols=88  Identities=23%  Similarity=0.322  Sum_probs=77.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+.+..+..++.|++.|+.|+|+.+++|+|++|+|++++.++
T Consensus        58 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  137 (323)
T cd05584          58 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG  137 (323)
T ss_pred             CCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            599999999999999999999998654222     235578888889999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       138 ~~kl~Dfg~~~~~  150 (323)
T cd05584         138 HVKLTDFGLCKES  150 (323)
T ss_pred             CEEEeeCcCCeec
Confidence            9999999987643

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.75  E-value=1e-17  Score=105.54  Aligned_cols=88  Identities=24%  Similarity=0.331  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.+++++|+.....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        53 ~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~  132 (328)
T cd05593          53 RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG  132 (328)
T ss_pred             CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC
Confidence            599999999999999999999998654322     235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       133 ~~kL~DfG~~~~~  145 (328)
T cd05593         133 HIKITDFGLCKEG  145 (328)
T ss_pred             cEEEecCcCCccC
Confidence            9999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0662|consensus

Probab=99.74  E-value=1.3e-18  Score=101.07  Aligned_cols=89  Identities=34%  Similarity=0.479  Sum_probs=80.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|+|.++........+..+.++|..+..+     ++.++.+.+..++.|++.|+.|||++.++|||+||+|+++..+|
T Consensus        59 khknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng  138 (292)
T KOG0662|consen   59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG  138 (292)
T ss_pred             hhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC
Confidence            5999999999999999999999998765442     25688899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .+|+.|||+++-++
T Consensus       139 elkladfglarafg  152 (292)
T KOG0662|consen  139 ELKLADFGLARAFG  152 (292)
T ss_pred             cEEecccchhhhcC
Confidence            99999999988543

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.74  E-value=1.5e-17  Score=104.74  Aligned_cols=88  Identities=20%  Similarity=0.321  Sum_probs=78.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.+...+.....++.++++.....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+|++++.+
T Consensus        53 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~  132 (327)
T cd05617          53 SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD  132 (327)
T ss_pred             cCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC
Confidence            4699999999999999999999998654322     23568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       133 ~~~kl~Dfg~~~~  145 (327)
T cd05617         133 GHIKLTDYGMCKE  145 (327)
T ss_pred             CCEEEecccccee
Confidence            9999999998874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.74  E-value=8.9e-18  Score=105.56  Aligned_cols=88  Identities=22%  Similarity=0.268  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+..++.++.++|++....+    ..+.+++..+..++.+++.|+.|+|+.+++|+|++|+|++++.++.
T Consensus        60 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~  139 (324)
T cd05589          60 RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGF  139 (324)
T ss_pred             CCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCc
Confidence            599999999999999999999998654322    3356899999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccc
Q psy7276          79 LKFFFYFFFSFF   90 (101)
Q Consensus        79 ~~i~dfgl~~~~   90 (101)
                      ++|+|||+++..
T Consensus       140 ~kL~Dfg~~~~~  151 (324)
T cd05589         140 VKIADFGLCKEG  151 (324)
T ss_pred             EEeCcccCCccC
Confidence            999999987643

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=9.3e-18  Score=106.79  Aligned_cols=89  Identities=18%  Similarity=0.281  Sum_probs=79.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+..+++++|++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.++
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~  138 (364)
T cd05599          59 DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG  138 (364)
T ss_pred             CCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence            599999999999999999999998654322     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++++|||++..+.
T Consensus       139 ~~kl~Dfg~~~~~~  152 (364)
T cd05599         139 HIKLSDFGLCTGLK  152 (364)
T ss_pred             CEEEeecccceecc
Confidence            99999999987653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.74  E-value=1.1e-17  Score=105.12  Aligned_cols=89  Identities=20%  Similarity=0.301  Sum_probs=78.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+..+..++.++++.....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.+
T Consensus        53 l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~  132 (323)
T cd05575          53 VKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ  132 (323)
T ss_pred             CCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC
Confidence            3699999999999999999999998654322     33568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       133 ~~~kl~Dfg~~~~~  146 (323)
T cd05575         133 GHVVLTDFGLCKEG  146 (323)
T ss_pred             CcEEEeccCCCccc
Confidence            99999999988753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.74  E-value=8.9e-18  Score=105.84  Aligned_cols=88  Identities=20%  Similarity=0.317  Sum_probs=78.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+.....++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+|++++.+
T Consensus        53 ~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~  132 (329)
T cd05588          53 SNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE  132 (329)
T ss_pred             cCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence            3699999999999999999999998654222     33578999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       133 ~~~kL~Dfg~~~~  145 (329)
T cd05588         133 GHIKLTDYGMCKE  145 (329)
T ss_pred             CCEEECcCccccc
Confidence            9999999998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.74  E-value=1e-17  Score=105.22  Aligned_cols=88  Identities=19%  Similarity=0.236  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.+++++....+     ....+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus        54 ~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~  133 (320)
T cd05590          54 NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG  133 (320)
T ss_pred             CCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence            599999999999999999999998654322     335688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       134 ~~kL~DfG~~~~~  146 (320)
T cd05590         134 HCKLADFGMCKEG  146 (320)
T ss_pred             cEEEeeCCCCeec
Confidence            9999999987753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.74  E-value=1.1e-17  Score=104.94  Aligned_cols=88  Identities=19%  Similarity=0.298  Sum_probs=77.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+...+.++.++|++....+     ....+.+..+..++.|++.|+.|+|+.+++|+|+||+||+++.+
T Consensus        53 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~  132 (321)
T cd05603          53 LKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ  132 (321)
T ss_pred             CCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence            3699999999999999999999998654322     23568888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       133 ~~~kl~Dfg~~~~  145 (321)
T cd05603         133 GHVVLTDFGLCKE  145 (321)
T ss_pred             CCEEEccCCCCcc
Confidence            9999999998774

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.74  E-value=9.5e-18  Score=105.49  Aligned_cols=88  Identities=20%  Similarity=0.314  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.+++++|+.....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        53 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  132 (323)
T cd05595          53 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG  132 (323)
T ss_pred             CCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC
Confidence            699999999999999999999998654322     235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       133 ~~kL~Dfg~~~~~  145 (323)
T cd05595         133 HIKITDFGLCKEG  145 (323)
T ss_pred             CEEecccHHhccc
Confidence            9999999987753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.74  E-value=1.4e-17  Score=106.75  Aligned_cols=88  Identities=14%  Similarity=0.270  Sum_probs=77.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+.+.++.++|++....+     ..+.+++..+..++.|++.|+.++|..+++|+|+||+||+++.+
T Consensus        58 l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~  137 (381)
T cd05626          58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD  137 (381)
T ss_pred             cCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCC
Confidence            3699999999999999999999998654322     23568889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       138 ~~~kL~DFGl~~~  150 (381)
T cd05626         138 GHIKLTDFGLCTG  150 (381)
T ss_pred             CCEEEeeCcCCcc
Confidence            9999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.74  E-value=1.9e-17  Score=105.37  Aligned_cols=89  Identities=20%  Similarity=0.273  Sum_probs=78.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .||+++.++..+...+.+++++|++....+     +.+.+++..+..++.|++.|+.++|+.+++|+|+||+||+++.++
T Consensus        59 ~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~  138 (360)
T cd05627          59 DGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG  138 (360)
T ss_pred             CCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC
Confidence            589999999999999999999998654321     335688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       139 ~vkL~DfG~~~~~~  152 (360)
T cd05627         139 HVKLSDFGLCTGLK  152 (360)
T ss_pred             CEEEeeccCCcccc
Confidence            99999999987543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.74  E-value=3.2e-17  Score=103.40  Aligned_cols=55  Identities=24%  Similarity=0.485  Sum_probs=50.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +++..+..++.|++.|+.|+|+++++|+|+||+|++++.++.++|+|||+++...
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~  225 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY  225 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccc
Confidence            6677788899999999999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG1187|consensus

Probab=99.74  E-value=7e-18  Score=107.66  Aligned_cols=89  Identities=20%  Similarity=0.216  Sum_probs=76.3

Q ss_pred             cccceeEEEEEeeCCCc-eEEEeeccccccccc------c-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTKES-LVSFREYSDSHRTKY------Q-RLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~i~~~l~~~h~~---~i~~~~lk~~ni   71 (101)
                      .|||+|.++++|.+.+. ..+++||.....+..      . .++|.....++..++.|+.|+|..   .|+|+|+|+.||
T Consensus       129 ~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNI  208 (361)
T KOG1187|consen  129 RHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNI  208 (361)
T ss_pred             CCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHe
Confidence            59999999999999884 889999865422211      2 679999999999999999999985   399999999999


Q ss_pred             EEeeCCCeEEEeeceecccc
Q psy7276          72 LLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~   91 (101)
                      |+|.+..+||+|||+|+...
T Consensus       209 LLD~~~~aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  209 LLDEDFNAKLSDFGLAKLGP  228 (361)
T ss_pred             eECCCCCEEccCccCcccCC
Confidence            99999999999999996443

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.74  E-value=1.9e-17  Score=103.81  Aligned_cols=90  Identities=19%  Similarity=0.284  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..++.++.++|+.....+     ....+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus        56 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  135 (318)
T cd05582          56 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG  135 (318)
T ss_pred             CCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC
Confidence            599999999999999999999998653222     234688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||+++....
T Consensus       136 ~~kL~Dfg~~~~~~~  150 (318)
T cd05582         136 HIKLTDFGLSKESID  150 (318)
T ss_pred             cEEEeeccCCcccCC
Confidence            999999999875443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.74  E-value=1.7e-17  Score=103.31  Aligned_cols=88  Identities=35%  Similarity=0.496  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+.....++.++++......     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.++
T Consensus        61 ~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  140 (303)
T cd07869          61 KHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG  140 (303)
T ss_pred             CCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            699999999999999999999998654322     124578888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||++...
T Consensus       141 ~~kl~Dfg~~~~~  153 (303)
T cd07869         141 ELKLADFGLARAK  153 (303)
T ss_pred             CEEECCCCcceec
Confidence            9999999987643

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.74  E-value=1.9e-17  Score=105.92  Aligned_cols=91  Identities=19%  Similarity=0.238  Sum_probs=79.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..|||++.+...+..+..++.++|++...    ......+++..+..++.+++.|+.|+|+.+++|+|++|+|++++.++
T Consensus       100 ~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~  179 (370)
T cd05596         100 ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG  179 (370)
T ss_pred             CCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC
Confidence            36999999999999999999999986442    22334678888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++.....
T Consensus       180 ~~kL~DfG~~~~~~~  194 (370)
T cd05596         180 HLKLADFGTCMKMDA  194 (370)
T ss_pred             CEEEEeccceeeccC
Confidence            999999999876543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.74  E-value=1.7e-17  Score=106.04  Aligned_cols=87  Identities=15%  Similarity=0.293  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..++.++.++|++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+|++++.++
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~  138 (376)
T cd05598          59 DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG  138 (376)
T ss_pred             CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC
Confidence            689999999999999999999998654322     235578888899999999999999999999999999999999999


Q ss_pred             CeEEEeeceecc
Q psy7276          78 DLKFFFYFFFSF   89 (101)
Q Consensus        78 ~~~i~dfgl~~~   89 (101)
                      .++|+|||++..
T Consensus       139 ~ikL~DFG~a~~  150 (376)
T cd05598         139 HIKLTDFGLCTG  150 (376)
T ss_pred             CEEEEeCCCCcc
Confidence            999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0597|consensus

Probab=99.74  E-value=2.6e-18  Score=112.99  Aligned_cols=91  Identities=24%  Similarity=0.364  Sum_probs=83.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .||||+.++..|++..+++.+.|++.....    +.+.++|+.+..++.++++|+.|+|+.+|+|||+||.||+++.++.
T Consensus        59 kHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~  138 (808)
T KOG0597|consen   59 KHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGT  138 (808)
T ss_pred             CCcchhhHHHhhcccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCc
Confidence            699999999999999999999999766322    4478999999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      +|++|||+++-+.-+
T Consensus       139 ~KlcdFg~Ar~m~~~  153 (808)
T KOG0597|consen  139 LKLCDFGLARAMSTN  153 (808)
T ss_pred             eeechhhhhhhcccC
Confidence            999999999977554

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=2.5e-17  Score=103.88  Aligned_cols=91  Identities=18%  Similarity=0.279  Sum_probs=78.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|++++.+...+..++.++.++|+.....+      ....+++..+..++.|++.|+.|+|+++++|+|++|+|++++.
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~  137 (331)
T cd05597          58 GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK  137 (331)
T ss_pred             CCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC
Confidence            3689999999999999999999998543211      1246889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++..+..
T Consensus       138 ~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597         138 NGHIRLADFGSCLRLLA  154 (331)
T ss_pred             CCCEEEEECCceeecCC
Confidence            99999999999876543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.73  E-value=2.2e-17  Score=102.29  Aligned_cols=88  Identities=34%  Similarity=0.462  Sum_probs=76.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++.++++......     ....+++..+..++.|++.|+.++|+++++|+|+||+|++++.++
T Consensus        61 ~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~  140 (288)
T cd07871          61 KHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG  140 (288)
T ss_pred             CCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            699999999999998889999998654222     113467888899999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++++|||+++..
T Consensus       141 ~~kl~DfG~~~~~  153 (288)
T cd07871         141 ELKLADFGLARAK  153 (288)
T ss_pred             CEEECcCcceeec
Confidence            9999999988753

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=2.3e-17  Score=106.26  Aligned_cols=87  Identities=17%  Similarity=0.241  Sum_probs=75.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+..+...+.++++.....    .....+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.++.
T Consensus       141 ~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~  220 (391)
T PHA03212        141 NHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD  220 (391)
T ss_pred             CCCCCCCEeEEEEECCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCC
Confidence            69999999999998888888888754321    12346788899999999999999999999999999999999999999


Q ss_pred             eEEEeeceecc
Q psy7276          79 LKFFFYFFFSF   89 (101)
Q Consensus        79 ~~i~dfgl~~~   89 (101)
                      ++|+|||++..
T Consensus       221 vkL~DFG~a~~  231 (391)
T PHA03212        221 VCLGDFGAACF  231 (391)
T ss_pred             EEEEeCCcccc
Confidence            99999999864

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.73  E-value=4.6e-17  Score=102.70  Aligned_cols=91  Identities=21%  Similarity=0.284  Sum_probs=78.9

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|++++.+...+...+.++.++|+.....+     . ...+++..+..++.|++.|+.++|+++++|+|+||+|++++.
T Consensus        58 ~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~  137 (331)
T cd05624          58 GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM  137 (331)
T ss_pred             CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC
Confidence            4689999999999999999999998643222     1 246788999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++..+..
T Consensus       138 ~~~~kl~DfG~a~~~~~  154 (331)
T cd05624         138 NGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             CCCEEEEeccceeeccC
Confidence            99999999999876543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0032|consensus

Probab=99.73  E-value=2.7e-17  Score=105.53  Aligned_cols=92  Identities=26%  Similarity=0.343  Sum_probs=79.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc---c-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY---Q-RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-   76 (101)
                      ..|||++.+...|++...++.+||.+....+..   . .+++..+..++.+++.++.|||..|++|+|+||+|+|+... 
T Consensus        93 ~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~  172 (382)
T KOG0032|consen   93 SGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD  172 (382)
T ss_pred             cCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc
Confidence            459999999999999999999999976432211   1 29999999999999999999999999999999999998543 


Q ss_pred             ---CCeEEEeeceeccccCc
Q psy7276          77 ---CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ---~~~~i~dfgl~~~~~~~   93 (101)
                         +.++++|||++....+.
T Consensus       173 ~~~~~ik~~DFGla~~~~~~  192 (382)
T KOG0032|consen  173 EGSGRIKLIDFGLAKFIKPG  192 (382)
T ss_pred             CCCCcEEEeeCCCceEccCC
Confidence               47999999999988773

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.73  E-value=2.2e-17  Score=104.91  Aligned_cols=89  Identities=22%  Similarity=0.354  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKY-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF   81 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i   81 (101)
                      .|+|++.++..+...+.++.++|+.....+.. ....+..+..++.|++.|+.|+|+++++|+|++++||+++.++.++|
T Consensus       130 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL  209 (353)
T PLN00034        130 NHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKI  209 (353)
T ss_pred             CCCCcceeeeEeccCCeEEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEE
Confidence            59999999999999999999999876544432 33567778889999999999999999999999999999999999999


Q ss_pred             Eeeceecccc
Q psy7276          82 FFYFFFSFFF   91 (101)
Q Consensus        82 ~dfgl~~~~~   91 (101)
                      +|||+++.+.
T Consensus       210 ~DfG~~~~~~  219 (353)
T PLN00034        210 ADFGVSRILA  219 (353)
T ss_pred             cccccceecc
Confidence            9999987654

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.73  E-value=3.1e-17  Score=103.08  Aligned_cols=89  Identities=21%  Similarity=0.292  Sum_probs=77.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.|++++.+...+...+.++.++|+.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.+
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~  137 (323)
T cd05616          58 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE  137 (323)
T ss_pred             cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCC
Confidence            4588999999999999999999998653222     23568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       138 ~~~kL~DfG~~~~~  151 (323)
T cd05616         138 GHIKIADFGMCKEN  151 (323)
T ss_pred             CcEEEccCCCceec
Confidence            99999999988753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.73  E-value=2.3e-17  Score=103.51  Aligned_cols=88  Identities=20%  Similarity=0.255  Sum_probs=77.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.++..+...+.++.++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+|++++.+
T Consensus        53 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~  132 (316)
T cd05620          53 WENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD  132 (316)
T ss_pred             cCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence            3699999999999999999999998654322     23568889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       133 ~~~kl~Dfg~~~~  145 (316)
T cd05620         133 GHIKIADFGMCKE  145 (316)
T ss_pred             CCEEeCccCCCee
Confidence            9999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0580|consensus

Probab=99.73  E-value=2e-18  Score=103.19  Aligned_cols=91  Identities=22%  Similarity=0.323  Sum_probs=79.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .||||+.++..|......++++|+....    .+   ....++++.+..|..|++.|+.|||..+++|||+||+|+|++.
T Consensus        80 ~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~  159 (281)
T KOG0580|consen   80 RHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS  159 (281)
T ss_pred             CCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC
Confidence            6999999999999999999999984321    12   2356899999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      .+.+|++|||.+..-..+
T Consensus       160 ~~~lkiAdfGwsV~~p~~  177 (281)
T KOG0580|consen  160 AGELKIADFGWSVHAPSN  177 (281)
T ss_pred             CCCeeccCCCceeecCCC
Confidence            999999999998765443

>KOG0986|consensus

Probab=99.72  E-value=4.7e-17  Score=104.75  Aligned_cols=92  Identities=17%  Similarity=0.216  Sum_probs=77.9

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccc-----cccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSD-----SHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|.+|.+...|++.+.++.++...-     .+.-+.  ..|+++.+..|+++++.|++++|.++|++||+||+|||+|+.
T Consensus       244 s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~  323 (591)
T KOG0986|consen  244 SPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDH  323 (591)
T ss_pred             cCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccC
Confidence            4678888889999999988877521     122222  479999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCccc
Q psy7276          77 CDLKFFFYFFFSFFFHFTV   95 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~~   95 (101)
                      |+++|+|+|||..+..+.+
T Consensus       324 GhvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  324 GHVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             CCeEeeccceEEecCCCCc
Confidence            9999999999987766544

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=2.8e-17  Score=103.62  Aligned_cols=89  Identities=20%  Similarity=0.306  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.+++++|++....+     ..+.+++..+..++.|++.|+.++|+.+++|+|++|+||+++.++
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  138 (333)
T cd05600          59 KSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG  138 (333)
T ss_pred             CCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            499999999999999999999998654222     224678899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       139 ~~kL~Dfg~a~~~~  152 (333)
T cd05600         139 HIKLTDFGLSKGIV  152 (333)
T ss_pred             CEEEEeCcCCcccc
Confidence            99999999987543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0696|consensus

Probab=99.72  E-value=1.9e-18  Score=110.59  Aligned_cols=87  Identities=20%  Similarity=0.257  Sum_probs=75.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeecc-----ccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYS-----DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .-|.++.+..+|++.+.++.+|||.     ..+.++.++|.|+.+..|+++++.|+-++|.+||++||||.+|++++.+|
T Consensus       408 kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG  487 (683)
T KOG0696|consen  408 KPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG  487 (683)
T ss_pred             CCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC
Confidence            3456667777778888888888874     34566779999999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecc
Q psy7276          78 DLKFFFYFFFSF   89 (101)
Q Consensus        78 ~~~i~dfgl~~~   89 (101)
                      .+||+|||+++.
T Consensus       488 HiKi~DFGmcKE  499 (683)
T KOG0696|consen  488 HIKIADFGMCKE  499 (683)
T ss_pred             ceEeeecccccc
Confidence            999999999883

>KOG0690|consensus

Probab=99.72  E-value=3.1e-18  Score=106.89  Aligned_cols=88  Identities=26%  Similarity=0.367  Sum_probs=75.9

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccc-----cccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSD-----SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.||.+..+-..|+++..++.+|++.-     .+......|++..+..+..++..|+.|+|+++|++||+|.+|++++.+
T Consensus       225 ~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkD  304 (516)
T KOG0690|consen  225 CRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKD  304 (516)
T ss_pred             ccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccC
Confidence            467877777777888888888888742     234455679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      |.+||.|||+++.
T Consensus       305 GHIKitDFGLCKE  317 (516)
T KOG0690|consen  305 GHIKITDFGLCKE  317 (516)
T ss_pred             CceEeeecccchh
Confidence            9999999999884

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.72  E-value=6e-17  Score=103.78  Aligned_cols=57  Identities=25%  Similarity=0.357  Sum_probs=51.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++++..+..++.|++.|+.|+|+++++|+|+||+|++++.++.++|+|||+++.+..
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence            366778889999999999999999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.72  E-value=7e-17  Score=99.67  Aligned_cols=90  Identities=19%  Similarity=0.309  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+.....++.++++.....+         ....+++..+..++.|++.|+.|+|+.+++|+|++|+|+++
T Consensus        51 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili  130 (280)
T cd05608          51 HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL  130 (280)
T ss_pred             CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence            589999999999999999999998643221         22458899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++++|||++..+..
T Consensus       131 ~~~~~~~l~dfg~~~~~~~  149 (280)
T cd05608         131 DNDGNVRISDLGLAVELKD  149 (280)
T ss_pred             CCCCCEEEeeCccceecCC
Confidence            9999999999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.72  E-value=9.1e-17  Score=99.36  Aligned_cols=89  Identities=15%  Similarity=0.198  Sum_probs=77.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|++++.+...+..++.++.++++.....+       ....+++..+..++.|++.|+.|+|+.+++|+|++|+|++++.
T Consensus        58 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~  137 (285)
T cd05631          58 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD  137 (285)
T ss_pred             CCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC
Confidence            589999999999999999999998654222       1235788999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++|+|||++....
T Consensus       138 ~~~~kl~Dfg~~~~~~  153 (285)
T cd05631         138 RGHIRISDLGLAVQIP  153 (285)
T ss_pred             CCCEEEeeCCCcEEcC
Confidence            9999999999987653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.72  E-value=3.7e-17  Score=102.63  Aligned_cols=88  Identities=24%  Similarity=0.319  Sum_probs=77.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+.+.+.++.++++.....+     ....+++..+..++.|++.|+.|+|+.+++|+|++|+|++++.+
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~  132 (316)
T cd05619          53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD  132 (316)
T ss_pred             cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC
Confidence            3699999999999999999999998643222     22468888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||++..
T Consensus       133 ~~~kl~Dfg~~~~  145 (316)
T cd05619         133 GHIKIADFGMCKE  145 (316)
T ss_pred             CCEEEccCCcceE
Confidence            9999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.72  E-value=4.2e-17  Score=102.37  Aligned_cols=88  Identities=23%  Similarity=0.356  Sum_probs=78.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+...+.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+|++++.+
T Consensus        53 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~  132 (318)
T cd05570          53 GKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE  132 (318)
T ss_pred             cCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC
Confidence            3699999999999999999999998654322     23468999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       133 ~~~kl~Dfg~~~~  145 (318)
T cd05570         133 GHIKIADFGMCKE  145 (318)
T ss_pred             CcEEecccCCCee
Confidence            9999999998764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.72  E-value=5e-17  Score=102.32  Aligned_cols=91  Identities=18%  Similarity=0.280  Sum_probs=78.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..||+++.+...+.....++.++++.....+     . ...+++..+..++.|++.|+.++|+.+++|+|++|+||+++.
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~  137 (330)
T cd05601          58 SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR  137 (330)
T ss_pred             CCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC
Confidence            3699999999999999999999998643221     1 146889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++..+..
T Consensus       138 ~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601         138 TGHIKLADFGSAARLTA  154 (330)
T ss_pred             CCCEEeccCCCCeECCC
Confidence            99999999999876544

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.72  E-value=8.4e-17  Score=101.51  Aligned_cols=89  Identities=20%  Similarity=0.317  Sum_probs=77.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|++++.+...+.....++.++|+.....+     + ...+++..+..++.|++.|+.++|+.+++|+|+||+|++++.
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~  137 (332)
T cd05623          58 GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM  137 (332)
T ss_pred             CCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC
Confidence            4689999999999999999999998543211     1 246888899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++|+|||++...
T Consensus       138 ~~~~kL~DfG~a~~~  152 (332)
T cd05623         138 NGHIRLADFGSCLKL  152 (332)
T ss_pred             CCCEEEeecchheec
Confidence            999999999988654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.71  E-value=8.7e-17  Score=100.13  Aligned_cols=89  Identities=21%  Similarity=0.288  Sum_probs=75.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc------------------------ccCCCHHHHHHHHHHHHHHHHHHHH
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK------------------------YQRLSNDHICYFLYQILRGLKYIHS   58 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~i~~~l~~~h~   58 (101)
                      .|||++.++..+.....++.++|+.....+.                        ...+++.....++.+++.|+.++|+
T Consensus        77 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~  156 (304)
T cd05096          77 KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS  156 (304)
T ss_pred             CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            5999999999999988999999985432110                        0135667788899999999999999


Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      .+++|+|+||+|++++.++.++|+|||+++...
T Consensus       157 ~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~  189 (304)
T cd05096         157 LNFVHRDLATRNCLVGENLTIKIADFGMSRNLY  189 (304)
T ss_pred             CCccccCcchhheEEcCCccEEECCCccceecc
Confidence            999999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.7e-17  Score=102.96  Aligned_cols=89  Identities=26%  Similarity=0.347  Sum_probs=77.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.++++.....+     ..+.+++..+..++.|++.|+.++|+++++|+|++|+||+++.++
T Consensus        59 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~  138 (291)
T cd05612          59 SHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG  138 (291)
T ss_pred             CCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            589999999988889999999998543221     235688899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||+++...
T Consensus       139 ~~kl~Dfg~~~~~~  152 (291)
T cd05612         139 HIKLTDFGFAKKLR  152 (291)
T ss_pred             CEEEEecCcchhcc
Confidence            99999999987654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.71  E-value=7.8e-17  Score=101.32  Aligned_cols=86  Identities=20%  Similarity=0.290  Sum_probs=74.5

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      |++++.+...+...+.++.++|+.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.++.
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~  139 (324)
T cd05587          60 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH  139 (324)
T ss_pred             CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC
Confidence            45678888889999999999998654322     2356889999999999999999999999999999999999999999


Q ss_pred             eEEEeeceecc
Q psy7276          79 LKFFFYFFFSF   89 (101)
Q Consensus        79 ~~i~dfgl~~~   89 (101)
                      ++|+|||+++.
T Consensus       140 ~kL~Dfg~~~~  150 (324)
T cd05587         140 IKIADFGMCKE  150 (324)
T ss_pred             EEEeecCccee
Confidence            99999998764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.71  E-value=8.8e-17  Score=98.45  Aligned_cols=88  Identities=18%  Similarity=0.140  Sum_probs=74.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc----------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK----------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+...+.++.++++.....+.          ....++..+..++.|++.|+.|+|+++++|+|+||+|++
T Consensus        53 ~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil  132 (269)
T cd05042          53 NHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQ  132 (269)
T ss_pred             CCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheE
Confidence            6999999999999999999999986432111          122356777889999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceeccc
Q psy7276          73 LNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~   90 (101)
                      ++.++.++++|||++...
T Consensus       133 l~~~~~~kl~dfg~~~~~  150 (269)
T cd05042         133 LTADLSVKIGDYGLALEQ  150 (269)
T ss_pred             ecCCCcEEEecccccccc
Confidence            999999999999998654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.70  E-value=8.3e-17  Score=101.24  Aligned_cols=88  Identities=17%  Similarity=0.243  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|++++.+...+...+.++.++|+.....+     ..+.+++..+..++.+++.|+.++|+++++|+|++|+|++++.++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~  138 (323)
T cd05615          59 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             CCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            457788888889999999999998654322     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       139 ~ikL~Dfg~~~~~  151 (323)
T cd05615         139 HIKIADFGMCKEH  151 (323)
T ss_pred             CEEEecccccccc
Confidence            9999999998753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.70  E-value=8.1e-17  Score=105.63  Aligned_cols=89  Identities=19%  Similarity=0.189  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.++..+..++..++++++......     ....+++..+..++.|++.|+.|+|..+++|+|+||+||+++.++
T Consensus       218 ~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~  297 (461)
T PHA03211        218 SHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE  297 (461)
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC
Confidence            599999999999888888888886433211     124588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||+++...
T Consensus       298 ~vkL~DFGla~~~~  311 (461)
T PHA03211        298 DICLGDFGAACFAR  311 (461)
T ss_pred             CEEEcccCCceecc
Confidence            99999999987654

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.70  E-value=6.1e-17  Score=104.23  Aligned_cols=90  Identities=16%  Similarity=0.152  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+.....++.++++......    ....+++..+..++.|++.|+.|+|..+++|+|+||+|++++.++.
T Consensus       144 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~  223 (392)
T PHA03207        144 SHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPEN  223 (392)
T ss_pred             CCCCccceeeeEeeCCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC
Confidence            699999999999988888998887533211    2356889999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      ++|+|||++.....
T Consensus       224 ~~l~DfG~a~~~~~  237 (392)
T PHA03207        224 AVLGDFGAACKLDA  237 (392)
T ss_pred             EEEccCccccccCc
Confidence            99999999876543

>KOG4236|consensus

Probab=99.70  E-value=7.7e-17  Score=105.82  Aligned_cols=91  Identities=26%  Similarity=0.358  Sum_probs=79.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .||.+|.+...|++++.++.+||..-...+      +.+++++........|++.|+.|+|.++|+|+|+||+|+|+...
T Consensus       621 ~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~  700 (888)
T KOG4236|consen  621 HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA  700 (888)
T ss_pred             CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC
Confidence            589999999999999999999997443322      34789999999999999999999999999999999999999765


Q ss_pred             ---CCeEEEeeceeccccCc
Q psy7276          77 ---CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ---~~~~i~dfgl~~~~~~~   93 (101)
                         -.+|++|||+++.+..+
T Consensus       701 ~~FPQvKlCDFGfARiIgEk  720 (888)
T KOG4236|consen  701 SPFPQVKLCDFGFARIIGEK  720 (888)
T ss_pred             CCCCceeeccccceeecchh
Confidence               35999999999987654

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=4.1e-17  Score=103.21  Aligned_cols=91  Identities=15%  Similarity=0.267  Sum_probs=79.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+..++.++++.....+     ..+.+++..+..++.|++.|+.++|..+++|+|++|+||+++.++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~  138 (350)
T cd05573          59 DSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG  138 (350)
T ss_pred             CCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            589999999999999999999998643211     225688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||++..+...
T Consensus       139 ~~kL~Dfg~~~~~~~~  154 (350)
T cd05573         139 HIKLADFGLCKKMNKA  154 (350)
T ss_pred             CEEeecCCCCccCccc
Confidence            9999999998866543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.70  E-value=3.5e-16  Score=96.45  Aligned_cols=90  Identities=17%  Similarity=0.181  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+..+..++.++++.....+       ....+++..+..++.|++.|+.++|+.+++|+|++|+|++++.
T Consensus        51 ~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~  130 (277)
T cd05607          51 NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD  130 (277)
T ss_pred             CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC
Confidence            699999999999999999999998643222       1134778888889999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++.....
T Consensus       131 ~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607         131 QGNCRLSDLGLAVELKD  147 (277)
T ss_pred             CCCEEEeeceeeeecCC
Confidence            99999999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.70  E-value=1.4e-16  Score=98.42  Aligned_cols=89  Identities=26%  Similarity=0.407  Sum_probs=73.8

Q ss_pred             cccceeEEEEEee-----CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHS-----TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+.     ....++.++++......      ....+++..+..++.|++.|+.|+|+++++|+|+||+|+
T Consensus        62 ~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Ni  141 (290)
T cd07862          62 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI  141 (290)
T ss_pred             CCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHE
Confidence            5999999988774     34557888887543211      123478889999999999999999999999999999999


Q ss_pred             EEeeCCCeEEEeeceecccc
Q psy7276          72 LLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~   91 (101)
                      +++.++.++++|||++....
T Consensus       142 l~~~~~~~kl~Dfg~~~~~~  161 (290)
T cd07862         142 LVTSSGQIKLADFGLARIYS  161 (290)
T ss_pred             EEcCCCCEEEccccceEecc
Confidence            99999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.70  E-value=5.8e-17  Score=100.03  Aligned_cols=89  Identities=19%  Similarity=0.386  Sum_probs=78.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++.++|+......     ....+++..+..++.|++.|+.++|+.+++|+|++|+|++++.++
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~  137 (287)
T cd07848          58 KQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND  137 (287)
T ss_pred             CCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            689999999999999999999998654322     124588889999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       138 ~~kl~Dfg~~~~~~  151 (287)
T cd07848         138 VLKLCDFGFARNLS  151 (287)
T ss_pred             cEEEeeccCccccc
Confidence            99999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0604|consensus

Probab=99.70  E-value=5.9e-17  Score=99.96  Aligned_cols=90  Identities=28%  Similarity=0.308  Sum_probs=74.0

Q ss_pred             CcccceeEEEEEeeC----CCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           2 GFHQDQITIEIRHST----KESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      +.|||+|.+++.|.+    ...++++||......+       ....|.|..+..++.||..|+.|+|+.+|.|||+||+|
T Consensus       112 s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpEN  191 (400)
T KOG0604|consen  112 SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPEN  191 (400)
T ss_pred             cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhh
Confidence            579999999988864    4567788886443221       22459999999999999999999999999999999999


Q ss_pred             eEEeeC---CCeEEEeeceecccc
Q psy7276          71 LLLNTT---CDLKFFFYFFFSFFF   91 (101)
Q Consensus        71 il~~~~---~~~~i~dfgl~~~~~   91 (101)
                      +|...+   ..+|++|||+++.-.
T Consensus       192 LLyt~t~~na~lKLtDfGFAK~t~  215 (400)
T KOG0604|consen  192 LLYTTTSPNAPLKLTDFGFAKETQ  215 (400)
T ss_pred             eeeecCCCCcceEecccccccccC
Confidence            998654   569999999999655

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.69  E-value=9.9e-17  Score=100.95  Aligned_cols=88  Identities=38%  Similarity=0.568  Sum_probs=73.5

Q ss_pred             cccceeEEEEEeeCC-----CceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTK-----ESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+...     ..++.+++++.....    ....+++..+..++.|++.|+.|+|+++++|+|+||+||++
T Consensus        57 ~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll  136 (338)
T cd07859          57 RHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA  136 (338)
T ss_pred             CCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence            599999998766432     347888888654322    22468899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccc
Q psy7276          74 NTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~   90 (101)
                      +.++.++|+|||+++..
T Consensus       137 ~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859         137 NADCKLKICDFGLARVA  153 (338)
T ss_pred             CCCCcEEEccCcccccc
Confidence            99999999999998754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.69  E-value=1.6e-16  Score=99.21  Aligned_cols=88  Identities=39%  Similarity=0.495  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.......     ...+++..+..++.|++.|+.++|+++++|+|++|+|++++.++
T Consensus        62 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~  141 (309)
T cd07872          62 KHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG  141 (309)
T ss_pred             CCCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            5999999999999999999999986543221     13467888889999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||++...
T Consensus       142 ~~kl~Dfg~~~~~  154 (309)
T cd07872         142 ELKLADFGLARAK  154 (309)
T ss_pred             CEEECccccceec
Confidence            9999999988653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=1.8e-16  Score=104.94  Aligned_cols=90  Identities=20%  Similarity=0.195  Sum_probs=72.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---c------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---K------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+..+.++++......   .      ........+..++.|++.|+.|+|+++++|+|+||+|||+
T Consensus       221 ~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl  300 (501)
T PHA03210        221 NHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL  300 (501)
T ss_pred             CCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            699999999999988888888775432111   0      1122345667799999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++|+|||+++.+..
T Consensus       301 ~~~~~vkL~DFGla~~~~~  319 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEK  319 (501)
T ss_pred             CCCCCEEEEeCCCceecCc
Confidence            9999999999999976644

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.68  E-value=2.3e-16  Score=100.38  Aligned_cols=88  Identities=30%  Similarity=0.529  Sum_probs=73.8

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+....      .++.++++.......  ...+++..+..++.|++.|+.|+|+.+++|+|++|+||+++
T Consensus        78 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~  157 (359)
T cd07876          78 NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  157 (359)
T ss_pred             CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC
Confidence            6999999998886543      467888886543322  13477888889999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccc
Q psy7276          75 TTCDLKFFFYFFFSFF   90 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~   90 (101)
                      .++.++|+|||+++..
T Consensus       158 ~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         158 SDCTLKILDFGLARTA  173 (359)
T ss_pred             CCCCEEEecCCCcccc
Confidence            9999999999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.68  E-value=1.2e-16  Score=102.16  Aligned_cols=89  Identities=39%  Similarity=0.546  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCC-----ceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKE-----SLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+....     .++.++++......    ....+++..+..++.|++.|+.|+|+.+++|+|++|+||++
T Consensus        57 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili  136 (372)
T cd07853          57 KHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV  136 (372)
T ss_pred             CCCCcCCHhheecCCCccccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE
Confidence            6999999998887766     67888887543221    23568899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++|+|||++....
T Consensus       137 ~~~~~~kL~Dfg~a~~~~  154 (372)
T cd07853         137 NSNCVLKICDFGLARVEE  154 (372)
T ss_pred             CCCCCEEeccccceeecc
Confidence            999999999999987543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.68  E-value=3.6e-16  Score=100.22  Aligned_cols=57  Identities=26%  Similarity=0.412  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      .+++..+..++.+++.|+.|+|+.+++|+|+||+|++++.++.++++|||+++....
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRN  266 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence            356777888999999999999999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=1.3e-16  Score=101.67  Aligned_cols=87  Identities=22%  Similarity=0.239  Sum_probs=75.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+......+.++++......     ....+++..+..++.|++.|+.|+|..+++|+|+||+||+++.++
T Consensus       115 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~  194 (357)
T PHA03209        115 NHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD  194 (357)
T ss_pred             CCCCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            699999999999988888888887533211     224688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecc
Q psy7276          78 DLKFFFYFFFSF   89 (101)
Q Consensus        78 ~~~i~dfgl~~~   89 (101)
                      .++|+|||+++.
T Consensus       195 ~~kl~DfG~a~~  206 (357)
T PHA03209        195 QVCIGDLGAAQF  206 (357)
T ss_pred             CEEEecCccccc
Confidence            999999999874

>KOG4721|consensus

Probab=99.68  E-value=1e-16  Score=105.87  Aligned_cols=90  Identities=18%  Similarity=0.215  Sum_probs=81.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccc-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .||||+.+.+.+..-.-++++||||.+..+..     ........+.|..+|+.|+.|+|.+.|||||||..|||+..+.
T Consensus       170 kH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d  249 (904)
T KOG4721|consen  170 KHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD  249 (904)
T ss_pred             cCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc
Confidence            69999999999999999999999987765532     4578888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .+||+|||-++.+..
T Consensus       250 ~VKIsDFGTS~e~~~  264 (904)
T KOG4721|consen  250 VVKISDFGTSKELSD  264 (904)
T ss_pred             eEEeccccchHhhhh
Confidence            999999999886544

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=5.1e-16  Score=96.05  Aligned_cols=89  Identities=17%  Similarity=0.223  Sum_probs=77.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+..+..++.++++.....+       ....++++.+..++.|++.|+.|+|+.+++|+|++|+|++++.
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~  137 (285)
T cd05605          58 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD  137 (285)
T ss_pred             CCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC
Confidence            589999999999999999999998643222       1235889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++|+|||++..+.
T Consensus       138 ~~~~~l~Dfg~~~~~~  153 (285)
T cd05605         138 YGHIRISDLGLAVEIP  153 (285)
T ss_pred             CCCEEEeeCCCceecC
Confidence            9999999999987653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.68  E-value=1.9e-16  Score=100.60  Aligned_cols=89  Identities=29%  Similarity=0.506  Sum_probs=73.7

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+....      .++.++++.......  ...+++..+..++.|++.|+.++|+++++|+|+||+|++++
T Consensus        74 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~  153 (355)
T cd07874          74 NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  153 (355)
T ss_pred             CCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC
Confidence            6999999998876443      467888876543322  13477888889999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||+++...
T Consensus       154 ~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874         154 SDCTLKILDFGLARTAG  170 (355)
T ss_pred             CCCCEEEeeCcccccCC
Confidence            99999999999987643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.68  E-value=4.8e-16  Score=96.81  Aligned_cols=91  Identities=21%  Similarity=0.317  Sum_probs=76.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      +.|||++.++..+...+..+.++++.....+                     ....++......++.|++.|+.|+|+.+
T Consensus        78 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g  157 (304)
T cd05101          78 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK  157 (304)
T ss_pred             ccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            4699999999999999999999997643211                     0123567778889999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++|+|++|+|++++.++.++++|||+++.+..
T Consensus       158 ivH~dlkp~Nili~~~~~~kl~D~g~~~~~~~  189 (304)
T cd05101         158 CIHRDLAARNVLVTENNVMKIADFGLARDVNN  189 (304)
T ss_pred             eeecccccceEEEcCCCcEEECCCccceeccc
Confidence            99999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.67  E-value=3.2e-16  Score=106.68  Aligned_cols=90  Identities=17%  Similarity=0.290  Sum_probs=78.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.....+++++++.....+     ..+.+++..+..++.+++.|+.|+|..+|+|+|+||+|||++.+
T Consensus        61 l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~  140 (669)
T cd05610          61 SKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNE  140 (669)
T ss_pred             cCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCC
Confidence            3699999999999999999999998643222     22457888899999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||+++...
T Consensus       141 g~vkL~DFGls~~~~  155 (669)
T cd05610         141 GHIKLTDFGLSKVTL  155 (669)
T ss_pred             CCEEEEeCCCCcccc
Confidence            999999999988654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0193|consensus

Probab=99.67  E-value=7.5e-17  Score=106.32  Aligned_cols=85  Identities=18%  Similarity=0.287  Sum_probs=71.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|.||+.+.+.++.++. .++...|....+.      +.+|+......++.|++.|+.|+|.++|+|+|||..||++.++
T Consensus       446 RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~  524 (678)
T KOG0193|consen  446 RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED  524 (678)
T ss_pred             chhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccC
Confidence            58888887777777666 7777776654432      2468888899999999999999999999999999999999999


Q ss_pred             CCeEEEeeceec
Q psy7276          77 CDLKFFFYFFFS   88 (101)
Q Consensus        77 ~~~~i~dfgl~~   88 (101)
                      +.++|+||||+.
T Consensus       525 ~kVkIgDFGLat  536 (678)
T KOG0193|consen  525 LKVKIGDFGLAT  536 (678)
T ss_pred             CcEEEeccccee
Confidence            999999999864

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.67  E-value=8.7e-16  Score=96.13  Aligned_cols=90  Identities=23%  Similarity=0.326  Sum_probs=76.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      ..|||++.++..+...+..+.++++.....+                     ....+++.....++.|++.|+.++|+++
T Consensus        75 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  154 (314)
T cd05099          75 GKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR  154 (314)
T ss_pred             cCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3699999999999988889999987543211                     1134778888899999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++|+|++|+|++++.++.++++|||+++...
T Consensus       155 i~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~  185 (314)
T cd05099         155 CIHRDLAARNVLVTEDNVMKIADFGLARGVH  185 (314)
T ss_pred             eeeccccceeEEEcCCCcEEEcccccccccc
Confidence            9999999999999999999999999987554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.67  E-value=8.5e-16  Score=95.09  Aligned_cols=90  Identities=22%  Similarity=0.355  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc---------------------ccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR---------------------TKYQRLSNDHICYFLYQILRGLKYIHSANV   61 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i   61 (101)
                      .|+|++.++..+...+.++.++++.....                     .....+++..+..++.|++.|+.|+|+.++
T Consensus        74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i  153 (293)
T cd05053          74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC  153 (293)
T ss_pred             CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            69999999999999999999998753211                     112457788889999999999999999999


Q ss_pred             eeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          62 LHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        62 ~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +|+|++|.|++++.++.++++|||+++.+..
T Consensus       154 vH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  184 (293)
T cd05053         154 IHRDLAARNVLVTEDHVMKIADFGLARDIHH  184 (293)
T ss_pred             cccccceeeEEEcCCCeEEeCcccccccccc
Confidence            9999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.67  E-value=4.7e-16  Score=96.97  Aligned_cols=87  Identities=22%  Similarity=0.311  Sum_probs=75.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      +.|||++.+...+...+..+.++++.....+                     ....+++..+..++.|++.|+.++|+++
T Consensus        65 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  144 (303)
T cd05088          65 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  144 (303)
T ss_pred             cCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4699999999999999999999998543211                     0124678889999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ++|+|++|+|++++.++.++++|||++.
T Consensus       145 i~H~dlkp~Nili~~~~~~kl~dfg~~~  172 (303)
T cd05088         145 FIHRDLAARNILVGENYVAKIADFGLSR  172 (303)
T ss_pred             ccccccchheEEecCCCcEEeCccccCc
Confidence            9999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.67  E-value=6.6e-16  Score=95.34  Aligned_cols=89  Identities=20%  Similarity=0.275  Sum_probs=77.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.+...+...+..+.++++.....+     ..+.+++..+..++.|++.|+.++|..+++|+|++|+|++++.+
T Consensus        54 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~  133 (279)
T cd05633          54 GDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH  133 (279)
T ss_pred             CCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC
Confidence            4689999999999998999999998654322     23568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       134 ~~~~l~dfg~~~~~  147 (279)
T cd05633         134 GHVRISDLGLACDF  147 (279)
T ss_pred             CCEEEccCCcceec
Confidence            99999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.67  E-value=7.3e-16  Score=94.35  Aligned_cols=90  Identities=20%  Similarity=0.256  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+...+..+.++++.....+      ..+.+++.....++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~  142 (267)
T cd05066          63 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSN  142 (267)
T ss_pred             CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCC
Confidence            599999999999999999999998654221      12457888899999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++++|||++..+..
T Consensus       143 ~~~~l~dfg~~~~~~~  158 (267)
T cd05066         143 LVCKVSDFGLSRVLED  158 (267)
T ss_pred             CeEEeCCCCccccccc
Confidence            9999999998876544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0695|consensus

Probab=99.67  E-value=2.8e-16  Score=98.75  Aligned_cols=88  Identities=22%  Similarity=0.314  Sum_probs=79.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecc-----ccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYS-----DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.||.+|.+..+|++...++.+.++.     ..+.++..+++++.+..|..+++-|+.|+|++||++||+|.+|+|++.+
T Consensus       308 sn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae  387 (593)
T KOG0695|consen  308 SNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE  387 (593)
T ss_pred             cCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC
Confidence            57899999999999999999888873     2355566789999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      |.+|++|+|+++.
T Consensus       388 ghikltdygmcke  400 (593)
T KOG0695|consen  388 GHIKLTDYGMCKE  400 (593)
T ss_pred             Cceeecccchhhc
Confidence            9999999999884

>KOG0194|consensus

Probab=99.66  E-value=2.6e-16  Score=102.64  Aligned_cols=88  Identities=24%  Similarity=0.253  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cccc-c-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RTKY-Q-RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~-~-~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+++.......++++||++...    .++. + .++..+...+..+.+.|++|+|+.+++|||+..+|+|+..+
T Consensus       219 ~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~  298 (474)
T KOG0194|consen  219 NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKK  298 (474)
T ss_pred             CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCC
Confidence            6999999999999999999999996553    2222 2 47888888999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.+||+|||+++.-
T Consensus       299 ~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  299 GVVKISDFGLSRAG  312 (474)
T ss_pred             CeEEeCccccccCC
Confidence            99999999998754

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.66  E-value=8.3e-16  Score=94.18  Aligned_cols=87  Identities=16%  Similarity=0.217  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+..++.++.++|+.....+      ....+++..+..++.+++.|+.++|+++++|+|++|+|++++.+
T Consensus        64 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~  143 (266)
T cd05064          64 DHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSD  143 (266)
T ss_pred             CCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCC
Confidence            599999999999999999999998654322      12457899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++++|||.+..
T Consensus       144 ~~~~l~dfg~~~~  156 (266)
T cd05064         144 LVCKISGFRRLQE  156 (266)
T ss_pred             CcEEECCCccccc
Confidence            9999999997654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.66  E-value=1.2e-15  Score=93.48  Aligned_cols=89  Identities=13%  Similarity=0.086  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+......+.++++.....+      ....+++.....++.|++.|+.|+|+.+++|+|++|+|++++.+
T Consensus        62 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~  141 (262)
T cd05077          62 SHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLARE  141 (262)
T ss_pred             CCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecC
Confidence            699999999999988888899988653221      22458889999999999999999999999999999999999876


Q ss_pred             CC-------eEEEeeceecccc
Q psy7276          77 CD-------LKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~-------~~i~dfgl~~~~~   91 (101)
                      +.       ++++|||++....
T Consensus       142 ~~~~~~~~~~~l~d~g~~~~~~  163 (262)
T cd05077         142 GIDGECGPFIKLSDPGIPITVL  163 (262)
T ss_pred             CccCCCCceeEeCCCCCCcccc
Confidence            54       8999999876543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.66  E-value=1.3e-15  Score=93.46  Aligned_cols=91  Identities=19%  Similarity=0.238  Sum_probs=78.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+..++.++.++|+.....+     ....++++.+..++.|++.|+.++|+.+++|+|++|+|++++.+
T Consensus        66 ~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~  145 (267)
T PHA03390         66 KDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA  145 (267)
T ss_pred             hcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC
Confidence            3699999999999999999999998643222     22478999999999999999999999999999999999999998


Q ss_pred             C-CeEEEeeceeccccC
Q psy7276          77 C-DLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~-~~~i~dfgl~~~~~~   92 (101)
                      + .++++|||++.....
T Consensus       146 ~~~~~l~dfg~~~~~~~  162 (267)
T PHA03390        146 KDRIYLCDYGLCKIIGT  162 (267)
T ss_pred             CCeEEEecCccceecCC
Confidence            8 999999998876544

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.66  E-value=1.6e-15  Score=92.52  Aligned_cols=89  Identities=16%  Similarity=0.257  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----c--cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----T--KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.....++.++++.....    .  ....+++..+..++.+++.|+.++|+.+++|+|++|.|++++.+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~  136 (256)
T cd05113          57 SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQ  136 (256)
T ss_pred             CCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC
Confidence            59999999999998888999999754321    1  12357899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||+++...
T Consensus       137 ~~~kl~d~g~~~~~~  151 (256)
T cd05113         137 GCVKVSDFGLSRYVL  151 (256)
T ss_pred             CCEEECCCccceecC
Confidence            999999999877543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.66  E-value=7.1e-16  Score=96.46  Aligned_cols=89  Identities=29%  Similarity=0.430  Sum_probs=70.6

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc-------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT-------------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.+...+..  ...++.++++......             ....+++..+..++.|++.|+.|+|+.+++|+|+|
T Consensus        56 ~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlk  135 (317)
T cd07868          56 KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK  135 (317)
T ss_pred             CCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence            59999999888753  4556777776432210             11247888899999999999999999999999999


Q ss_pred             CCCeEEe----eCCCeEEEeeceecccc
Q psy7276          68 PSNLLLN----TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        68 ~~nil~~----~~~~~~i~dfgl~~~~~   91 (101)
                      |+|+++.    .++.++|+|||+++.+.
T Consensus       136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07868         136 PANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             HHHEEEecCCCCcCcEEEeecCceeccC
Confidence            9999993    45789999999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.66  E-value=9.6e-16  Score=94.46  Aligned_cols=89  Identities=22%  Similarity=0.342  Sum_probs=78.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF   81 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i   81 (101)
                      .|||++.++..+......+.++++.....+. ...+++..+..++.+++.|+.|+|+.+++|+|++|+|++++.++.+++
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l  136 (279)
T cd06619          57 DSPYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKL  136 (279)
T ss_pred             CCCCeeeEEEEEEECCEEEEEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEE
Confidence            6999999999999999999999986654332 245788888999999999999999999999999999999999999999


Q ss_pred             Eeeceecccc
Q psy7276          82 FFYFFFSFFF   91 (101)
Q Consensus        82 ~dfgl~~~~~   91 (101)
                      +|||++....
T Consensus       137 ~dfg~~~~~~  146 (279)
T cd06619         137 CDFGVSTQLV  146 (279)
T ss_pred             eeCCcceecc
Confidence            9999887543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.66  E-value=1.2e-15  Score=92.67  Aligned_cols=89  Identities=18%  Similarity=0.170  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+......+.++|+......      ....+++..+..++.+++.|+.|+|+++++|+|++|+|++++.+
T Consensus        51 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~  130 (252)
T cd05084          51 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEK  130 (252)
T ss_pred             CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCC
Confidence            699999999999999999999998543211      12357888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       131 ~~~kl~dfg~~~~~~  145 (252)
T cd05084         131 NVLKISDFGMSREEE  145 (252)
T ss_pred             CcEEECccccCcccc
Confidence            999999999877543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=1.4e-15  Score=92.73  Aligned_cols=89  Identities=25%  Similarity=0.321  Sum_probs=77.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.++++......     ..+.+++.....++.+++.|+.++|+.+++|+|++|+|++++.++
T Consensus        62 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~  141 (263)
T cd06625          62 QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG  141 (263)
T ss_pred             CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            599999999999999999999998643222     224578888899999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||+++...
T Consensus       142 ~~~l~dfg~~~~~~  155 (263)
T cd06625         142 NVKLGDFGASKRLQ  155 (263)
T ss_pred             CEEEeecccceecc
Confidence            99999999987543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0612|consensus

Probab=99.65  E-value=2e-16  Score=109.99  Aligned_cols=84  Identities=23%  Similarity=0.350  Sum_probs=64.7

Q ss_pred             EEEEEeeCCCceEEEeeccccc----c-ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEe
Q psy7276           9 TIEIRHSTKESLVSFREYSDSH----R-TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFF   83 (101)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~d   83 (101)
                      .+...|++...+|++|+|..+.    . .+.+++++..+.+|..+++.|+..+|+.|++|||+||+|+|++..|.++++|
T Consensus       139 ~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLAD  218 (1317)
T KOG0612|consen  139 QLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLAD  218 (1317)
T ss_pred             HHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeecc
Confidence            3334444555555555542211    1 1224699999999999999999999999999999999999999999999999


Q ss_pred             eceeccccC
Q psy7276          84 YFFFSFFFH   92 (101)
Q Consensus        84 fgl~~~~~~   92 (101)
                      ||-+..+..
T Consensus       219 FGsClkm~~  227 (1317)
T KOG0612|consen  219 FGSCLKMDA  227 (1317)
T ss_pred             chhHHhcCC
Confidence            997777763

>KOG0607|consensus

Probab=99.65  E-value=5.8e-17  Score=100.88  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=76.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccc-----cccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSD-----SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|+||+.++..|++...+|+++|...     .+.++...|.|..+..+...++.|+.|+|.+||.|||+||+|||....
T Consensus       133 qgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~p  212 (463)
T KOG0607|consen  133 QGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESP  212 (463)
T ss_pred             cCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCC
Confidence            369999999999999999999999743     344555779999999999999999999999999999999999998665


Q ss_pred             C---CeEEEeeceecc
Q psy7276          77 C---DLKFFFYFFFSF   89 (101)
Q Consensus        77 ~---~~~i~dfgl~~~   89 (101)
                      +   .+||+||.|+.-
T Consensus       213 n~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  213 NKVSPVKICDFDLGSG  228 (463)
T ss_pred             CCcCceeeeccccccc
Confidence            4   489999987653

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.65  E-value=8.7e-16  Score=94.59  Aligned_cols=88  Identities=30%  Similarity=0.423  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+..++.++.++++......       ....+++..+..++.|++.|+.++|+.+++|+|++|+|++++.
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~  136 (285)
T cd07861          57 QHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN  136 (285)
T ss_pred             CCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC
Confidence            499999999999999999999998643211       1145789999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++|+|||++...
T Consensus       137 ~~~~~l~dfg~~~~~  151 (285)
T cd07861         137 KGVIKLADFGLARAF  151 (285)
T ss_pred             CCcEEECcccceeec
Confidence            999999999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.65  E-value=1.8e-15  Score=97.83  Aligned_cols=56  Identities=30%  Similarity=0.469  Sum_probs=50.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +++..+..++.|++.|+.|+|..+++|+|++|+|++++.++.++++|||+++....
T Consensus       234 l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~  289 (400)
T cd05105         234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMH  289 (400)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccc
Confidence            56677788999999999999999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.65  E-value=1.1e-15  Score=94.19  Aligned_cols=89  Identities=18%  Similarity=0.258  Sum_probs=74.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCc
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSANV   61 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i   61 (101)
                      .|||++.++..+...+.++.++++......                     ....+++..+..++.|++.|+.++|..++
T Consensus        66 ~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi  145 (283)
T cd05091          66 QHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHV  145 (283)
T ss_pred             CCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCc
Confidence            599999999999888888888887432111                     01246777888999999999999999999


Q ss_pred             eeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          62 LHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        62 ~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|+|+||+|++++.++.++++|||+++...
T Consensus       146 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (283)
T cd05091         146 VHKDLATRNVLVFDKLNVKISDLGLFREVY  175 (283)
T ss_pred             cccccchhheEecCCCceEecccccccccc
Confidence            999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.65  E-value=9.5e-16  Score=100.13  Aligned_cols=90  Identities=28%  Similarity=0.305  Sum_probs=71.2

Q ss_pred             cccceeEEEEEeeCC--------CceEEEeecccccc--------ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q psy7276           3 FHQDQITIEIRHSTK--------ESLVSFREYSDSHR--------TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--------~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l   66 (101)
                      .|||++.+...+...        ..++.+++++....        .....+++..+..++.|++.|+.|+|+.+++|||+
T Consensus       117 ~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDL  196 (440)
T PTZ00036        117 NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDL  196 (440)
T ss_pred             CCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCc
Confidence            599999987665321        23567888765321        12346888899999999999999999999999999


Q ss_pred             CCCCeEEeeCC-CeEEEeeceeccccC
Q psy7276          67 KPSNLLLNTTC-DLKFFFYFFFSFFFH   92 (101)
Q Consensus        67 k~~nil~~~~~-~~~i~dfgl~~~~~~   92 (101)
                      ||+||+++.++ .++|+|||+++.+..
T Consensus       197 Kp~NILl~~~~~~vkL~DFGla~~~~~  223 (440)
T PTZ00036        197 KPQNLLIDPNTHTLKLCDFGSAKNLLA  223 (440)
T ss_pred             CHHHEEEcCCCCceeeeccccchhccC
Confidence            99999998665 699999999986543

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.65  E-value=1.6e-15  Score=94.76  Aligned_cols=90  Identities=29%  Similarity=0.430  Sum_probs=71.5

Q ss_pred             cccceeEEEEEee--CCCceEEEeeccccccc-------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRHS--TKESLVSFREYSDSHRT-------------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~~--~~~~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.+...+.  .+..++.++++......             ....+++..+..++.|++.|+.++|+.+++|+|+|
T Consensus        56 ~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlk  135 (317)
T cd07867          56 KHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLK  135 (317)
T ss_pred             CCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence            5999999988874  35566777877543211             11247788889999999999999999999999999


Q ss_pred             CCCeEE----eeCCCeEEEeeceeccccC
Q psy7276          68 PSNLLL----NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        68 ~~nil~----~~~~~~~i~dfgl~~~~~~   92 (101)
                      |+||++    +.++.++|+|||+++....
T Consensus       136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07867         136 PANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             HHHEEEccCCCCCCcEEEeeccceeccCC
Confidence            999999    4557899999999886543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.65  E-value=1.2e-15  Score=93.64  Aligned_cols=87  Identities=22%  Similarity=0.321  Sum_probs=74.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      +.|||++.++..+...+.++.++++.....+    .                 ...++++....++.+++.|+.++|+.+
T Consensus        53 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~  132 (270)
T cd05047          53 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  132 (270)
T ss_pred             ccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4799999999999999999999987542211    0                 123678888999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ++|+|++|+|++++.++.++++|||++.
T Consensus       133 i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         133 FIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             EeecccccceEEEcCCCeEEECCCCCcc
Confidence            9999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0603|consensus

Probab=99.65  E-value=4.5e-16  Score=102.84  Aligned_cols=92  Identities=20%  Similarity=0.287  Sum_probs=77.0

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE-eeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL-NTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~-~~~   76 (101)
                      +.|||++.+...+..+...+.+++...+.....    .+.....+..|+++++.|+.++|.+|++|||++|+|||+ +..
T Consensus       373 ~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~  452 (612)
T KOG0603|consen  373 RDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSA  452 (612)
T ss_pred             cCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCC
Confidence            579999999999999999999999755432211    222236677799999999999999999999999999999 688


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||.++..++.
T Consensus       453 g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  453 GHLRLTYFGFWSELERS  469 (612)
T ss_pred             CcEEEEEechhhhCchh
Confidence            99999999998876655

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.7e-15  Score=92.27  Aligned_cols=89  Identities=15%  Similarity=0.250  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+..+.++++.....+      ....+++.....++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~  136 (256)
T cd05059          57 SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGED  136 (256)
T ss_pred             CCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCC
Confidence            699999999999999999999987543211      12357888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||+++...
T Consensus       137 ~~~kl~dfg~~~~~~  151 (256)
T cd05059         137 NVVKVSDFGLARYVL  151 (256)
T ss_pred             CcEEECCcccceecc
Confidence            999999999887543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.65  E-value=6.2e-16  Score=98.59  Aligned_cols=90  Identities=29%  Similarity=0.484  Sum_probs=73.8

Q ss_pred             CcccceeEEEEEeeCC------CceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           2 GFHQDQITIEIRHSTK------ESLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~------~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      ..|||++.++..+...      ..++.++++........  ..+++..+..++.|++.|+.++|+++++|+|+||+||++
T Consensus        80 l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll  159 (364)
T cd07875          80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  159 (364)
T ss_pred             cCCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE
Confidence            3699999998777543      34688888865433221  346788888999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++|+|||+++...
T Consensus       160 ~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         160 KSDCTLKILDFGLARTAG  177 (364)
T ss_pred             CCCCcEEEEeCCCccccC
Confidence            999999999999987554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.65  E-value=1.2e-15  Score=93.23  Aligned_cols=88  Identities=24%  Similarity=0.307  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++.+++++....+     ..+.+++..+..++.+++.|+.|+|..+++|+|++|+|++++.++
T Consensus        64 ~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~  143 (267)
T cd06645          64 KHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             CCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            699999999999999999999998654322     235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++++|||++...
T Consensus       144 ~~~l~dfg~~~~~  156 (267)
T cd06645         144 HVKLADFGVSAQI  156 (267)
T ss_pred             CEEECcceeeeEc
Confidence            9999999987654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.65  E-value=7.4e-16  Score=95.86  Aligned_cols=88  Identities=35%  Similarity=0.477  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++.++++......     ....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++
T Consensus        62 ~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~  141 (301)
T cd07873          62 KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG  141 (301)
T ss_pred             CCCCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC
Confidence            599999999999999999999998654222     124578888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++++|||++...
T Consensus       142 ~~kl~dfg~~~~~  154 (301)
T cd07873         142 ELKLADFGLARAK  154 (301)
T ss_pred             cEEECcCcchhcc
Confidence            9999999987643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0614|consensus

Probab=99.65  E-value=1.6e-17  Score=108.22  Aligned_cols=91  Identities=18%  Similarity=0.215  Sum_probs=81.0

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|.||.++..|-+...+|++||.|+....     ..+.|++..+..+...+++|++|+|+++|++|||||+|++++.+|-
T Consensus       479 s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy  558 (732)
T KOG0614|consen  479 SDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY  558 (732)
T ss_pred             chHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc
Confidence            47788888888888899999998876433     4478999999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCcc
Q psy7276          79 LKFFFYFFFSFFFHFT   94 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~~   94 (101)
                      +|++|||+++.+..+.
T Consensus       559 ~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  559 LKLVDFGFAKKIGSGR  574 (732)
T ss_pred             eEEeehhhHHHhccCC
Confidence            9999999999887664

>KOG1026|consensus

Probab=99.65  E-value=8.3e-16  Score=104.09  Aligned_cols=96  Identities=21%  Similarity=0.217  Sum_probs=82.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-------------------YQRLSNDHICYFLYQILRGLKYIHSANVLH   63 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~   63 (101)
                      .|||||++++.+..+..+++++||.....++                   ...++..+...++.||+.|+.|+.++..+|
T Consensus       547 ~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVH  626 (774)
T KOG1026|consen  547 QHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVH  626 (774)
T ss_pred             cCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccc
Confidence            6999999999999999999999985432111                   123778889999999999999999999999


Q ss_pred             ccCCCCCeEEeeCCCeEEEeeceeccccCcccccc
Q psy7276          64 RDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHDV   98 (101)
Q Consensus        64 ~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~~~~~   98 (101)
                      |||..+|+|++++..+||+||||++..-..+.|..
T Consensus       627 RDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~  661 (774)
T KOG1026|consen  627 RDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKV  661 (774)
T ss_pred             cchhhhhceeccceEEEecccccchhhhhhhhhcc
Confidence            99999999999999999999999998766665544

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.65  E-value=1.9e-15  Score=94.33  Aligned_cols=90  Identities=23%  Similarity=0.336  Sum_probs=76.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      ..|||++.++..+...+..+.+++++....+                     ....+++.....++.+++.|+.++|+.+
T Consensus        81 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  160 (307)
T cd05098          81 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK  160 (307)
T ss_pred             cCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3699999999999999999999998643211                     0124677888899999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++|+|++|+|++++.++.++++|||++....
T Consensus       161 i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~  191 (307)
T cd05098         161 CIHRDLAARNVLVTEDNVMKIADFGLARDIH  191 (307)
T ss_pred             cccccccHHheEEcCCCcEEECCCccccccc
Confidence            9999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.65  E-value=1.6e-15  Score=94.56  Aligned_cols=91  Identities=21%  Similarity=0.320  Sum_probs=77.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      +.|||++.++..+...+.++.++++.....+     .  ...+++.....++.+++.|+.|+|+++++|+|++|+|++++
T Consensus        96 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~  175 (302)
T cd05055          96 GNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT  175 (302)
T ss_pred             cCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc
Confidence            3699999999999999999999998543211     1  12378899999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++++|||+++.+..
T Consensus       176 ~~~~~~l~dfg~~~~~~~  193 (302)
T cd05055         176 HGKIVKICDFGLARDIMN  193 (302)
T ss_pred             CCCeEEECCCcccccccC
Confidence            999999999999876543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.65  E-value=1.4e-15  Score=93.76  Aligned_cols=89  Identities=20%  Similarity=0.268  Sum_probs=77.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.||+++.+...+...+.++.++++.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+|++++.+
T Consensus        54 ~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~  133 (278)
T cd05606          54 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH  133 (278)
T ss_pred             CCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC
Confidence            3689999999999999999999998643222     23568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       134 ~~~kl~dfg~~~~~  147 (278)
T cd05606         134 GHVRISDLGLACDF  147 (278)
T ss_pred             CCEEEccCcCcccc
Confidence            99999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.65  E-value=2.5e-15  Score=92.62  Aligned_cols=88  Identities=22%  Similarity=0.272  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+..+.++++......      ....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        60 ~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~  139 (282)
T cd06643          60 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLD  139 (282)
T ss_pred             CCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccC
Confidence            699999999999999999999998643222      12468899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       140 ~~~kl~dfg~~~~~  153 (282)
T cd06643         140 GDIKLADFGVSAKN  153 (282)
T ss_pred             CCEEEccccccccc
Confidence            99999999987654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG1989|consensus

Probab=99.64  E-value=3.9e-16  Score=105.65  Aligned_cols=90  Identities=19%  Similarity=0.276  Sum_probs=72.7

Q ss_pred             CCcccceeEEEEE-ee---CC---CceEEEeecccc-ccc------cccCCCHHHHHHHHHHHHHHHHHHHHCC--ceec
Q psy7276           1 MGFHQDQITIEIR-HS---TK---ESLVSFREYSDS-HRT------KYQRLSNDHICYFLYQILRGLKYIHSAN--VLHR   64 (101)
Q Consensus         1 ~~~h~~~~~~~~~-~~---~~---~~l~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~   64 (101)
                      +.+|||||.+++. ..   .+   -.+++.||||.. ...      ....|.+..+..|+.+++.|+.+||...  |+||
T Consensus        91 L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHR  170 (738)
T KOG1989|consen   91 LSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHR  170 (738)
T ss_pred             hcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchh
Confidence            3579999999993 32   12   346688899873 222      1145999999999999999999999987  9999


Q ss_pred             cCCCCCeEEeeCCCeEEEeeceeccc
Q psy7276          65 DLKPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        65 ~lk~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      |||.+|+|+..++..||||||-+...
T Consensus       171 DLKiENvLls~~g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  171 DLKIENVLLSADGNYKLCDFGSATTK  196 (738)
T ss_pred             hhhhhheEEcCCCCEEeCcccccccc
Confidence            99999999999999999999965543

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.64  E-value=1.2e-15  Score=94.74  Aligned_cols=88  Identities=19%  Similarity=0.280  Sum_probs=74.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      ..|||++.++..+...+.++.++++.....+    .                 ...+++..+..++.|++.|+.++|+++
T Consensus        60 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~  139 (297)
T cd05089          60 GHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ  139 (297)
T ss_pred             cCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3699999999999988889999987532111    0                 124678888999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      ++|+|++|+|++++.++.++++|||++..
T Consensus       140 ivH~dlkp~Nill~~~~~~kl~dfg~~~~  168 (297)
T cd05089         140 FIHRDLAARNVLVGENLASKIADFGLSRG  168 (297)
T ss_pred             cccCcCCcceEEECCCCeEEECCcCCCcc
Confidence            99999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.64  E-value=1.4e-15  Score=96.07  Aligned_cols=88  Identities=19%  Similarity=0.284  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+..++.++.++++.....+     ..+.+++..+..++.+++.|+.|+|.. +++|+|++|+|++++.+
T Consensus        61 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~  140 (333)
T cd06650          61 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  140 (333)
T ss_pred             CCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCC
Confidence            599999999999999999999998654222     224578888899999999999999975 79999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++..+
T Consensus       141 ~~~kL~Dfg~~~~~  154 (333)
T cd06650         141 GEIKLCDFGVSGQL  154 (333)
T ss_pred             CCEEEeeCCcchhh
Confidence            99999999988754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.64  E-value=1.2e-15  Score=94.11  Aligned_cols=90  Identities=23%  Similarity=0.340  Sum_probs=73.3

Q ss_pred             cccceeEEEEEeeC-----CCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHST-----KESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+..     ...++.++++......      ....+++..+..++.|++.|+.|+|+.+++|+|++|+|+
T Consensus        60 ~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Ni  139 (288)
T cd07863          60 DHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI  139 (288)
T ss_pred             CCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence            59999999887753     2346778877543211      123478999999999999999999999999999999999


Q ss_pred             EEeeCCCeEEEeeceeccccC
Q psy7276          72 LLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +++.++.++++|||++.....
T Consensus       140 li~~~~~~kl~dfg~~~~~~~  160 (288)
T cd07863         140 LVTSGGQVKLADFGLARIYSC  160 (288)
T ss_pred             EECCCCCEEECccCccccccC
Confidence            999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.64  E-value=1.5e-15  Score=94.04  Aligned_cols=90  Identities=24%  Similarity=0.311  Sum_probs=78.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.++++.....+     ..+.+++.....++.+++.|+.++|+.+++|+|++|.|++++.++
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~  138 (290)
T cd05580          59 RHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG  138 (290)
T ss_pred             CCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC
Confidence            499999999999999999999998743221     235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       139 ~~kl~dfg~~~~~~~  153 (290)
T cd05580         139 YIKITDFGFAKRVKG  153 (290)
T ss_pred             CEEEeeCCCccccCC
Confidence            999999998876543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.64  E-value=2.1e-15  Score=92.86  Aligned_cols=90  Identities=22%  Similarity=0.355  Sum_probs=78.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+..++.++++......     ....+++..+..++.|++.++.++|..+++|+|++|+|++++.++
T Consensus        58 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~  137 (286)
T cd07847          58 KHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG  137 (286)
T ss_pred             CCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC
Confidence            599999999999999999999998654322     224588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       138 ~~~l~dfg~~~~~~~  152 (286)
T cd07847         138 QIKLCDFGFARILTG  152 (286)
T ss_pred             cEEECccccceecCC
Confidence            999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.64  E-value=2.7e-15  Score=92.51  Aligned_cols=89  Identities=17%  Similarity=0.226  Sum_probs=72.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.. ...+.++++.....+      ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+|++++.+
T Consensus        67 ~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~  145 (279)
T cd05111          67 DHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD  145 (279)
T ss_pred             CCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC
Confidence            59999999987654 455667776432211      12457888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++++|||+++...+
T Consensus       146 ~~~kl~Dfg~~~~~~~  161 (279)
T cd05111         146 SIVQIADFGVADLLYP  161 (279)
T ss_pred             CcEEEcCCccceeccC
Confidence            9999999999876543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0667|consensus

Probab=99.64  E-value=1.2e-15  Score=100.94  Aligned_cols=88  Identities=24%  Similarity=0.276  Sum_probs=73.3

Q ss_pred             cceeEEEEEeeCCCceEEEeeccc---cccc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC--
Q psy7276           5 QDQITIEIRHSTKESLVSFREYSD---SHRT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT--   76 (101)
Q Consensus         5 ~~~~~~~~~~~~~~~l~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~--   76 (101)
                      -|+|.+.+.|+-.+.++++.|...   +...   +..+++...+..++.|++.|+.++|..+|||+||||+|||+...  
T Consensus       248 ~n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r  327 (586)
T KOG0667|consen  248 YNIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR  327 (586)
T ss_pred             eeEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc
Confidence            378999999999999999988632   2222   22458889999999999999999999999999999999999654  


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      ..+||+|||.|.+...
T Consensus       328 ~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  328 SRIKVIDFGSSCFESQ  343 (586)
T ss_pred             CceeEEecccccccCC
Confidence            4699999998875443

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.64  E-value=2.9e-15  Score=92.27  Aligned_cols=87  Identities=14%  Similarity=0.061  Sum_probs=73.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+......+.++|++....+      ..+.+++..+..++.|++.|+.|+|+++++|+|++|+|++++..
T Consensus        74 ~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~  153 (274)
T cd05076          74 SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARL  153 (274)
T ss_pred             CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEecc
Confidence            699999999999999999999998654322      23457888999999999999999999999999999999999764


Q ss_pred             C-------CeEEEeeceecc
Q psy7276          77 C-------DLKFFFYFFFSF   89 (101)
Q Consensus        77 ~-------~~~i~dfgl~~~   89 (101)
                      +       .++++|||++..
T Consensus       154 ~~~~~~~~~~kl~d~g~~~~  173 (274)
T cd05076         154 GLAEGTSPFIKLSDPGVSFT  173 (274)
T ss_pred             CcccCccceeeecCCccccc
Confidence            3       379999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.64  E-value=1.7e-15  Score=92.95  Aligned_cols=88  Identities=17%  Similarity=0.082  Sum_probs=73.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      ..|||++.++..+......+.++++.....+    .     ....++..+..++.+++.|+.|+|+.+++|+|++|+|++
T Consensus        52 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil  131 (268)
T cd05086          52 LQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCF  131 (268)
T ss_pred             cCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEE
Confidence            3699999999999999999999998653211    1     122455667788999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceecc
Q psy7276          73 LNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~   89 (101)
                      ++.++.++++|||++..
T Consensus       132 ~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086         132 LTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             EcCCccEEecccccccc
Confidence            99999999999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.64  E-value=3.5e-15  Score=91.91  Aligned_cols=88  Identities=18%  Similarity=0.213  Sum_probs=74.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cc----------------cCCCHHHHHHHHHHHHHHHHHHHHCCc
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KY----------------QRLSNDHICYFLYQILRGLKYIHSANV   61 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~----------------~~~~~~~~~~~~~~i~~~l~~~h~~~i   61 (101)
                      .|||++.++..+...+..+.++++.....+     ..                ..+++.....++.+++.|+.++|..++
T Consensus        66 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i  145 (283)
T cd05048          66 QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF  145 (283)
T ss_pred             CCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            589999999999988888888887542211     00                346778888999999999999999999


Q ss_pred             eeccCCCCCeEEeeCCCeEEEeeceeccc
Q psy7276          62 LHRDLKPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        62 ~~~~lk~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      +|+|++|+|++++.++.++|+|||+++..
T Consensus       146 ~H~dlkp~Nil~~~~~~~~L~dfg~~~~~  174 (283)
T cd05048         146 VHRDLAARNCLVGEGLTVKISDFGLSRDI  174 (283)
T ss_pred             eccccccceEEEcCCCcEEECCCcceeec
Confidence            99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.64  E-value=2.1e-15  Score=93.32  Aligned_cols=87  Identities=33%  Similarity=0.480  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.+...+..++..+.++++......     ....+.+..+..++.|++.|+.++|+.+++|+|++|+|++++.++
T Consensus        61 ~h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~  140 (291)
T cd07870          61 KHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG  140 (291)
T ss_pred             CCCCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC
Confidence            599999999999999899999988643322     123467778888999999999999999999999999999999999


Q ss_pred             CeEEEeeceecc
Q psy7276          78 DLKFFFYFFFSF   89 (101)
Q Consensus        78 ~~~i~dfgl~~~   89 (101)
                      .++|+|||+++.
T Consensus       141 ~~~l~Dfg~~~~  152 (291)
T cd07870         141 ELKLADFGLARA  152 (291)
T ss_pred             cEEEeccccccc
Confidence            999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.64  E-value=2.2e-15  Score=95.08  Aligned_cols=89  Identities=20%  Similarity=0.303  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+     ....+++..+..++.+++.|+.|+|+. +++|+|++|+|++++.+
T Consensus        61 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~  140 (331)
T cd06649          61 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR  140 (331)
T ss_pred             CCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCC
Confidence            599999999999999999999998654222     224578889999999999999999986 69999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||++....
T Consensus       141 ~~~kl~Dfg~~~~~~  155 (331)
T cd06649         141 GEIKLCDFGVSGQLI  155 (331)
T ss_pred             CcEEEccCccccccc
Confidence            999999999887543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0584|consensus

Probab=99.64  E-value=7.6e-16  Score=101.73  Aligned_cols=90  Identities=26%  Similarity=0.298  Sum_probs=73.3

Q ss_pred             cccceeEEEEEeeCCCc--eEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKES--LVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~--l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~--~i~~~~lk~~nil~   73 (101)
                      .||||+.++..|.+...  +-.+.+......+     +.++.....+..|++||+.|+.|+|++  .|+|||||.+||++
T Consensus        99 ~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFi  178 (632)
T KOG0584|consen   99 KHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFV  178 (632)
T ss_pred             CCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEE
Confidence            69999999999987655  6666665333222     336688899999999999999999998  49999999999999


Q ss_pred             ee-CCCeEEEeeceeccccC
Q psy7276          74 NT-TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~-~~~~~i~dfgl~~~~~~   92 (101)
                      +. .|.+||+|+|||..+..
T Consensus       179 nG~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  179 NGNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             cCCcCceeecchhHHHHhhc
Confidence            65 48999999999876543

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.64  E-value=3.7e-15  Score=94.05  Aligned_cols=90  Identities=22%  Similarity=0.334  Sum_probs=75.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      ..|||++.++..+...+.++.++++.....+                     ....++......++.|++.|+.++|.++
T Consensus        75 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  154 (334)
T cd05100          75 GKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK  154 (334)
T ss_pred             cCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3699999999999999999999987543211                     1123566777889999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++|+|++|+|++++.++.++|+|||+++...
T Consensus       155 ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~  185 (334)
T cd05100         155 CIHRDLAARNVLVTEDNVMKIADFGLARDVH  185 (334)
T ss_pred             eeccccccceEEEcCCCcEEECCcccceecc
Confidence            9999999999999999999999999987554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.64  E-value=2.4e-15  Score=91.94  Aligned_cols=89  Identities=27%  Similarity=0.313  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++.++++.....+     ..+.+++..+..++.|++.|+.++|..+++|+|++|+|++++.++
T Consensus        64 ~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~  143 (267)
T cd06646          64 KHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             CCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            699999999999999999999998543212     235678899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++++|||++..+.
T Consensus       144 ~~~l~dfg~~~~~~  157 (267)
T cd06646         144 DVKLADFGVAAKIT  157 (267)
T ss_pred             CEEECcCccceeec
Confidence            99999999887553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.64  E-value=3.1e-15  Score=92.61  Aligned_cols=89  Identities=22%  Similarity=0.329  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-----------------------------ccCCCHHHHHHHHHHHHHHH
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-----------------------------YQRLSNDHICYFLYQILRGL   53 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l   53 (101)
                      .|||++.++..+...+..+.++++.....+.                             ...+++..+..++.+++.|+
T Consensus        61 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l  140 (290)
T cd05045          61 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGM  140 (290)
T ss_pred             CCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHH
Confidence            5999999999998888888898885421110                             12367788889999999999


Q ss_pred             HHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          54 KYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        54 ~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      .++|+.+++|+|++|+|++++.++.++++|||+++...
T Consensus       141 ~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~  178 (290)
T cd05045         141 QYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY  178 (290)
T ss_pred             HHHHHCCeehhhhhhheEEEcCCCcEEecccccccccc
Confidence            99999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.63  E-value=3.4e-15  Score=90.86  Aligned_cols=88  Identities=18%  Similarity=0.293  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ..+.+++.....++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~  136 (256)
T cd05114          57 SHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSST  136 (256)
T ss_pred             CCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCC
Confidence            599999999999999999999998643211      12457888899999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||.++..
T Consensus       137 ~~~kl~d~g~~~~~  150 (256)
T cd05114         137 GVVKVSDFGMTRYV  150 (256)
T ss_pred             CeEEECCCCCcccc
Confidence            99999999987754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.63  E-value=4.3e-15  Score=90.70  Aligned_cols=88  Identities=19%  Similarity=0.198  Sum_probs=73.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+. ....+.++++.....+      ....+++..+..++.+++.|+.++|.++++|+|++|+|++++.+
T Consensus        53 ~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~  131 (257)
T cd05115          53 DNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQ  131 (257)
T ss_pred             CCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCC
Confidence            6999999998775 4567788887543211      22457899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       132 ~~~kl~dfg~~~~~~  146 (257)
T cd05115         132 HYAKISDFGLSKALG  146 (257)
T ss_pred             CcEEeccCCcccccc
Confidence            999999999887543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.63  E-value=3.4e-15  Score=90.76  Aligned_cols=90  Identities=22%  Similarity=0.314  Sum_probs=77.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...+.++.++++......       ....+++..+..++.+++.|+.++|+.+++|+|++|.|++++.
T Consensus        56 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~  135 (255)
T cd08219          56 KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ  135 (255)
T ss_pred             CCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC
Confidence            589999999999999999999998643211       1234788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||++.....
T Consensus       136 ~~~~~l~dfg~~~~~~~  152 (255)
T cd08219         136 NGKVKLGDFGSARLLTS  152 (255)
T ss_pred             CCcEEEcccCcceeecc
Confidence            99999999998875543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.63  E-value=3.6e-15  Score=91.21  Aligned_cols=91  Identities=15%  Similarity=0.180  Sum_probs=72.9

Q ss_pred             cccceeEEEEEeeCCCc------eEEEeeccccccc-----------cccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHSTKES------LVSFREYSDSHRT-----------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~------l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|||++.++..+.....      .+.++++......           ....+++..+..++.+++.|+.++|+++++|+|
T Consensus        59 ~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~d  138 (273)
T cd05035          59 DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRD  138 (273)
T ss_pred             CCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            59999999887765444      5667766432111           113578888999999999999999999999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ++|+|++++.++.++++|||+++.+...
T Consensus       139 lkp~Nil~~~~~~~kl~dfg~~~~~~~~  166 (273)
T cd05035         139 LAARNCMLREDMTVCVADFGLSKKIYSG  166 (273)
T ss_pred             cchheEEECCCCeEEECCccceeecccc
Confidence            9999999999999999999998866543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.63  E-value=2.5e-15  Score=92.69  Aligned_cols=89  Identities=17%  Similarity=0.243  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc----------------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK----------------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      .|||++.+...+..+...+.++++.......                      ...+++.....++.+++.|+.|+|+++
T Consensus        65 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  144 (283)
T cd05090          65 HHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF  144 (283)
T ss_pred             CCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence            5999999999999988899999875432110                      123667788889999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++|+|++|+|++++.++.++++|||+++...
T Consensus       145 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (283)
T cd05090         145 FVHKDLAARNILIGEQLHVKISDLGLSREIY  175 (283)
T ss_pred             eehhccccceEEEcCCCcEEecccccccccc
Confidence            9999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.63  E-value=2.9e-15  Score=92.77  Aligned_cols=89  Identities=22%  Similarity=0.308  Sum_probs=76.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cc-----------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KY-----------QRLSNDHICYFLYQILRGLKYIHSANVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~-----------~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l   66 (101)
                      .|||++.++..+...+.++.++++.....+     ..           ..+++..+..++.+++.|+.++|+.+++|+|+
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dl  156 (296)
T cd05051          77 SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDL  156 (296)
T ss_pred             CCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence            589999999999988899999987543211     11           15788899999999999999999999999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceecccc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|+|++++.++.++++|||++....
T Consensus       157 kp~Nili~~~~~~~l~dfg~~~~~~  181 (296)
T cd05051         157 ATRNCLVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             chhceeecCCCceEEccccceeecc
Confidence            9999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.63  E-value=6.1e-16  Score=95.31  Aligned_cols=89  Identities=31%  Similarity=0.463  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.+++++.....     ..+.+++..+..++.|++.|+.++|..+++|+|++|+|++++.++
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~  136 (284)
T cd07839          57 KHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG  136 (284)
T ss_pred             CCCCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC
Confidence            589999999999999999999998654322     124588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||+++...
T Consensus       137 ~~~l~dfg~~~~~~  150 (284)
T cd07839         137 ELKLADFGLARAFG  150 (284)
T ss_pred             cEEECccchhhccC
Confidence            99999999887543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.63  E-value=2.6e-15  Score=94.04  Aligned_cols=89  Identities=15%  Similarity=0.166  Sum_probs=71.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----c--cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----T--KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.... ...++++.....    .  ....+++.....++.+++.|+.|+|+++++|+|+||+|++++.+
T Consensus        67 ~h~niv~~~g~~~~~~-~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~  145 (316)
T cd05108          67 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTP  145 (316)
T ss_pred             CCCCCCeEEEEEcCCC-ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCC
Confidence            6999999998887653 445555532211    1  12347788888999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||+++.+..
T Consensus       146 ~~~kl~DfG~a~~~~~  161 (316)
T cd05108         146 QHVKITDFGLAKLLGA  161 (316)
T ss_pred             CcEEEccccccccccC
Confidence            9999999999886643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.63  E-value=1.9e-15  Score=93.50  Aligned_cols=87  Identities=37%  Similarity=0.491  Sum_probs=76.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.+...+......+.++|+......     ....+++..+..++.|++.|+.|+|+.+++|+|++|+|++++.++
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~  140 (291)
T cd07844          61 KHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG  140 (291)
T ss_pred             CCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC
Confidence            599999999999999999999998654322     123578889999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecc
Q psy7276          78 DLKFFFYFFFSF   89 (101)
Q Consensus        78 ~~~i~dfgl~~~   89 (101)
                      .++++|||+++.
T Consensus       141 ~~kl~dfg~~~~  152 (291)
T cd07844         141 ELKLADFGLARA  152 (291)
T ss_pred             CEEECccccccc
Confidence            999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.63  E-value=3.4e-15  Score=91.42  Aligned_cols=89  Identities=21%  Similarity=0.283  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+...+..+.++++.....+      ..+.+++.....++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        63 ~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~  142 (269)
T cd05065          63 DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSN  142 (269)
T ss_pred             CCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCC
Confidence            599999999999999999999998543211      12457888899999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       143 ~~~kl~dfg~~~~~~  157 (269)
T cd05065         143 LVCKVSDFGLSRFLE  157 (269)
T ss_pred             CcEEECCCccccccc
Confidence            999999999887554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=3e-15  Score=91.12  Aligned_cols=90  Identities=24%  Similarity=0.312  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.....++.++++......     . ...+++..+..++.|++.|+.++|+++++|+|++|+|++++.+
T Consensus        58 ~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~  137 (262)
T cd06613          58 RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTED  137 (262)
T ss_pred             CCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCC
Confidence            699999999999999999999998543221     1 2568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++++|||++.....
T Consensus       138 ~~~~l~d~g~~~~~~~  153 (262)
T cd06613         138 GDVKLADFGVSAQLTA  153 (262)
T ss_pred             CCEEECccccchhhhh
Confidence            9999999998775443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0579|consensus

Probab=99.63  E-value=3e-16  Score=104.99  Aligned_cols=88  Identities=25%  Similarity=0.334  Sum_probs=78.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccccc------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTK------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      |.||+++.++..|.-.+.+++.+++|.+.-..      ...+.+.++..+..+++.|+.|+|++.|+|||||..|||+.-
T Consensus        86 CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl  165 (1187)
T KOG0579|consen   86 CDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL  165 (1187)
T ss_pred             CCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe
Confidence            67999999999999999999999998764221      245889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecc
Q psy7276          76 TCDLKFFFYFFFSF   89 (101)
Q Consensus        76 ~~~~~i~dfgl~~~   89 (101)
                      +|.++++|||++..
T Consensus       166 dGdirLADFGVSAK  179 (1187)
T KOG0579|consen  166 DGDIRLADFGVSAK  179 (1187)
T ss_pred             cCcEeeeccccccc
Confidence            99999999998753

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.63  E-value=3.5e-15  Score=92.35  Aligned_cols=88  Identities=20%  Similarity=0.255  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|++++.+...+..+..++.++++......       ....+++..+..++.|++.|+.|+|..+++|+|++|+|++++.
T Consensus        58 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~  137 (285)
T cd05632          58 NSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD  137 (285)
T ss_pred             CCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC
Confidence            689999999999999999999987543211       1235889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||++...
T Consensus       138 ~~~~kl~Dfg~~~~~  152 (285)
T cd05632         138 YGHIRISDLGLAVKI  152 (285)
T ss_pred             CCCEEEecCCcceec
Confidence            999999999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.63  E-value=4.7e-15  Score=91.01  Aligned_cols=90  Identities=14%  Similarity=0.135  Sum_probs=76.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc---------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK---------------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.++..+..+...+.++++.....+.               ...+++..+..++.+++.|+.|+|+.+++|+|++
T Consensus        67 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~  146 (277)
T cd05032          67 NCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLA  146 (277)
T ss_pred             CCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence            5999999999999999999999975422110               1235677888899999999999999999999999


Q ss_pred             CCCeEEeeCCCeEEEeeceeccccC
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      |+|++++.++.++++|||+++.+..
T Consensus       147 p~nill~~~~~~kl~dfg~~~~~~~  171 (277)
T cd05032         147 ARNCMVAEDLTVKIGDFGMTRDIYE  171 (277)
T ss_pred             hheEEEcCCCCEEECCcccchhhcc
Confidence            9999999999999999999875543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.63  E-value=3.8e-15  Score=91.07  Aligned_cols=89  Identities=21%  Similarity=0.277  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+...+..+.++++.....+      ..+.+++..+..++.+++.|+.++|+++++|+|++|.|++++.+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~  142 (266)
T cd05033          63 DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN  142 (266)
T ss_pred             CCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence            599999999999999999999997543221      12467889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++..+.
T Consensus       143 ~~~~l~dfg~~~~~~  157 (266)
T cd05033         143 LVCKVSDFGLSRRLE  157 (266)
T ss_pred             CCEEECccchhhccc
Confidence            999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.63  E-value=5.4e-15  Score=91.19  Aligned_cols=89  Identities=24%  Similarity=0.303  Sum_probs=74.2

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+..  ...++.++++......    ....+++..+..++.+++.|+.++|+++++|+|++|+|++++.+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~  143 (283)
T cd05080          64 YHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDND  143 (283)
T ss_pred             CCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCC
Confidence            69999999887654  3457788887543222    23468899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||+++.+.
T Consensus       144 ~~~~l~dfg~~~~~~  158 (283)
T cd05080         144 RLVKIGDFGLAKAVP  158 (283)
T ss_pred             CcEEEeecccccccC
Confidence            999999999987654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.63  E-value=5.4e-15  Score=91.50  Aligned_cols=88  Identities=19%  Similarity=0.202  Sum_probs=76.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------------------KYQRLSNDHICYFLYQILRGLKYIHSANVLHR   64 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~   64 (101)
                      .|||++.+...+...+.++.++++.....+                  ....+++..+..++.+++.|+.++|+.+++|+
T Consensus        65 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~  144 (288)
T cd05093          65 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHR  144 (288)
T ss_pred             CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            589999999999999999999997542211                  11247888999999999999999999999999


Q ss_pred             cCCCCCeEEeeCCCeEEEeeceeccc
Q psy7276          65 DLKPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        65 ~lk~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      |++|+|++++.++.++++|||++...
T Consensus       145 dlkp~Nili~~~~~~kl~dfg~~~~~  170 (288)
T cd05093         145 DLATRNCLVGENLLVKIGDFGMSRDV  170 (288)
T ss_pred             ccCcceEEEccCCcEEeccCCccccc
Confidence            99999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.63  E-value=5.7e-15  Score=90.82  Aligned_cols=88  Identities=14%  Similarity=0.117  Sum_probs=73.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c-----------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.+...+..+...+.++++.....+    .           ...+++..+..++.+++.|+.++|+.+++|+|++
T Consensus        67 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlk  146 (277)
T cd05062          67 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLA  146 (277)
T ss_pred             CCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcc
Confidence            589999999999999999999997543211    0           0124567788899999999999999999999999


Q ss_pred             CCCeEEeeCCCeEEEeeceeccc
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      |+|++++.++.++++|||++...
T Consensus       147 p~Nil~~~~~~~~l~dfg~~~~~  169 (277)
T cd05062         147 ARNCMVAEDFTVKIGDFGMTRDI  169 (277)
T ss_pred             hheEEEcCCCCEEECCCCCcccc
Confidence            99999999999999999988654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.62  E-value=4.9e-15  Score=91.78  Aligned_cols=88  Identities=24%  Similarity=0.262  Sum_probs=77.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+...+.++.++++......      ....+++..+..++.|++.++.++|..+++|+|++|+|++++.+
T Consensus        67 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~  146 (292)
T cd06644          67 NHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLD  146 (292)
T ss_pred             CCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCC
Confidence            699999999999999999999998654322      12457899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||++...
T Consensus       147 ~~~kl~dfg~~~~~  160 (292)
T cd06644         147 GDIKLADFGVSAKN  160 (292)
T ss_pred             CCEEEccCccceec
Confidence            99999999987643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.62  E-value=3e-15  Score=99.07  Aligned_cols=90  Identities=17%  Similarity=0.271  Sum_probs=70.7

Q ss_pred             cccceeEEEEEeeCCC--------ceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHSTKE--------SLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|+|++.+...+....        .++.++++.....+         ....+++..+..++.|++.|+.|+|+.+++|+|
T Consensus        89 ~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrD  168 (496)
T PTZ00283         89 DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRD  168 (496)
T ss_pred             CCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            5788888766554322        25577777543211         124578899999999999999999999999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +||+||+++.++.++|+|||+++.+..
T Consensus       169 LKP~NILl~~~~~vkL~DFGls~~~~~  195 (496)
T PTZ00283        169 IKSANILLCSNGLVKLGDFGFSKMYAA  195 (496)
T ss_pred             CCHHHEEEeCCCCEEEEecccCeeccc
Confidence            999999999999999999999876543

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.62  E-value=9.8e-16  Score=96.91  Aligned_cols=89  Identities=34%  Similarity=0.579  Sum_probs=71.2

Q ss_pred             cccceeEEEEEeeCC------CceEEEeecccc---ccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTK------ESLVSFREYSDS---HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~------~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...      ...+.++++...   .......+++..+..++.|++.|+.|+|..+++|+|++|+|+++
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~  151 (343)
T cd07878          72 KHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV  151 (343)
T ss_pred             CCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE
Confidence            589999888766433      234566655322   22233568999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++|+|||++....
T Consensus       152 ~~~~~~kl~Dfg~~~~~~  169 (343)
T cd07878         152 NEDCELRILDFGLARQAD  169 (343)
T ss_pred             CCCCCEEEcCCccceecC
Confidence            999999999999987643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.62  E-value=2.8e-15  Score=93.23  Aligned_cols=91  Identities=20%  Similarity=0.256  Sum_probs=78.0

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..|||++.+...+..+...+.++++.....+    ....+++.....++.+++.|+.++|..+++|+|++|+|++++.++
T Consensus        74 ~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~  153 (296)
T cd06654          74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG  153 (296)
T ss_pred             CCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            3699999999999999999999998643222    234578888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++....+
T Consensus       154 ~~kl~dfg~~~~~~~  168 (296)
T cd06654         154 SVKLTDFGFCAQITP  168 (296)
T ss_pred             CEEECccccchhccc
Confidence            999999998775443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.62  E-value=3.4e-15  Score=92.93  Aligned_cols=91  Identities=20%  Similarity=0.253  Sum_probs=78.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..|||++.++..+..++..+.++++......    ....+++..+..++.+++.++.++|+.+++|+|++|+|++++.++
T Consensus        73 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~  152 (297)
T cd06656          73 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG  152 (297)
T ss_pred             CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            4699999999999999999999998543222    234578888899999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++....+
T Consensus       153 ~~~l~Dfg~~~~~~~  167 (297)
T cd06656         153 SVKLTDFGFCAQITP  167 (297)
T ss_pred             CEEECcCccceEccC
Confidence            999999998876544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.62  E-value=5.2e-15  Score=90.51  Aligned_cols=89  Identities=22%  Similarity=0.293  Sum_probs=77.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+...+..+.++++.....+      ..+.+++.....++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~  143 (268)
T cd05063          64 SHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSN  143 (268)
T ss_pred             CCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCC
Confidence            589999999999999999999997543222      22457888899999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       144 ~~~kl~dfg~~~~~~  158 (268)
T cd05063         144 LECKVSDFGLSRVLE  158 (268)
T ss_pred             CcEEECCCccceecc
Confidence            999999999887553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.62  E-value=5.6e-15  Score=90.54  Aligned_cols=87  Identities=18%  Similarity=0.146  Sum_probs=73.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc----------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK----------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+.....++.++|+.......          ....++..+..++.+++.|+.|+|+.+++|+|++|+|++
T Consensus        53 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil  132 (269)
T cd05087          53 QHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCL  132 (269)
T ss_pred             CCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEE
Confidence            5999999999999888899999985432111          113456677788999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceecc
Q psy7276          73 LNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~   89 (101)
                      ++.++.++++|||++..
T Consensus       133 ~~~~~~~kL~dfg~~~~  149 (269)
T cd05087         133 LTADLTVKIGDYGLSHN  149 (269)
T ss_pred             EcCCCcEEECCcccccc
Confidence            99999999999998864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.62  E-value=3.5e-15  Score=94.47  Aligned_cols=56  Identities=23%  Similarity=0.458  Sum_probs=51.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      .+++..+..++.+++.|+.|+|.++++|+|+||+|++++.++.++|+|||++..+.
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~  224 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY  224 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcc
Confidence            56788888999999999999999999999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.62  E-value=4.3e-15  Score=92.66  Aligned_cols=88  Identities=23%  Similarity=0.347  Sum_probs=76.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+..++.++.++++.....+     ..+.+++.....++.+++.|+.++|+.+++|+|++|.||+++.+
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~  137 (305)
T cd05609          58 AENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSM  137 (305)
T ss_pred             CCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCC
Confidence            4689999999999999999999998643221     23567888888999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++++|||+++.
T Consensus       138 ~~~~l~dfg~~~~  150 (305)
T cd05609         138 GHIKLTDFGLSKI  150 (305)
T ss_pred             CCEEEeeCCCccc
Confidence            9999999998763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.62  E-value=5.1e-15  Score=90.98  Aligned_cols=89  Identities=21%  Similarity=0.318  Sum_probs=76.4

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+..+  +.++.++++......     ....+++..+..++.+++.|+.++|..+++|+|++|+|++++.
T Consensus        56 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~  135 (282)
T cd07831          56 PHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD  135 (282)
T ss_pred             CCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC
Confidence            599999999998877  889999998643222     1245789999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                       +.++++|||++.....
T Consensus       136 -~~~kl~dfg~~~~~~~  151 (282)
T cd07831         136 -DILKLADFGSCRGIYS  151 (282)
T ss_pred             -CCeEEEeccccccccc
Confidence             9999999999876543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=6.4e-15  Score=89.88  Aligned_cols=89  Identities=18%  Similarity=0.181  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.++.++++......     .  ...+++.....++.+++.|+.++|+.+++|+|++|+|++++.
T Consensus        59 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~  138 (261)
T cd05068          59 RHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE  138 (261)
T ss_pred             CCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC
Confidence            599999999999999999999988632211     1  125788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||+++.+.
T Consensus       139 ~~~~~l~dfg~~~~~~  154 (261)
T cd05068         139 NNICKVADFGLARVIK  154 (261)
T ss_pred             CCCEEECCcceEEEcc
Confidence            9999999999987654

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.62  E-value=3.1e-15  Score=91.37  Aligned_cols=89  Identities=24%  Similarity=0.387  Sum_probs=77.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~  143 (267)
T cd06628          64 QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG  143 (267)
T ss_pred             CCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC
Confidence            599999999999999999999988643222     225678888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++++|||+++...
T Consensus       144 ~~~l~dfg~~~~~~  157 (267)
T cd06628         144 GIKISDFGISKKLE  157 (267)
T ss_pred             CEEecccCCCcccc
Confidence            99999999887665

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.62  E-value=3.9e-15  Score=92.62  Aligned_cols=90  Identities=19%  Similarity=0.272  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+.....++.++++.....+    ....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++.
T Consensus        74 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~  153 (296)
T cd06655          74 KNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS  153 (296)
T ss_pred             CCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC
Confidence            699999999999999999999998644322    2245789999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      ++++|||++....+
T Consensus       154 ~kl~dfg~~~~~~~  167 (296)
T cd06655         154 VKLTDFGFCAQITP  167 (296)
T ss_pred             EEEccCccchhccc
Confidence            99999998776544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.62  E-value=4.9e-15  Score=89.89  Aligned_cols=91  Identities=26%  Similarity=0.277  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+..+.++++......       ....+++..+..++.+++.|+.++|..+++|+|++++||+++.
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~  136 (256)
T cd08529          57 DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA  136 (256)
T ss_pred             CCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC
Confidence            699999999999999999999997543211       1245788888899999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++++|||+++.+...
T Consensus       137 ~~~~~l~df~~~~~~~~~  154 (256)
T cd08529         137 YDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCEEEcccccceeccCc
Confidence            999999999988765443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.62  E-value=6.1e-15  Score=89.90  Aligned_cols=89  Identities=20%  Similarity=0.264  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.++..+...+..+.++++......       ....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.
T Consensus        59 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~  138 (261)
T cd05072          59 QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE  138 (261)
T ss_pred             CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC
Confidence            699999999999999999999997543211       1245678888889999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++....
T Consensus       139 ~~~~~l~dfg~~~~~~  154 (261)
T cd05072         139 SLMCKIADFGLARVIE  154 (261)
T ss_pred             CCcEEECCCccceecC
Confidence            9999999999987654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.62  E-value=5.2e-15  Score=91.61  Aligned_cols=89  Identities=17%  Similarity=0.225  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|++++.+...+.....++.++++.....+       ....+++..+..++.|++.|+.|+|..+++|+|++|+|++++.
T Consensus        58 ~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~  137 (285)
T cd05630          58 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD  137 (285)
T ss_pred             CCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC
Confidence            589999999999988899999987543211       1135888899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++....
T Consensus       138 ~~~~~l~Dfg~~~~~~  153 (285)
T cd05630         138 HGHIRISDLGLAVHVP  153 (285)
T ss_pred             CCCEEEeeccceeecC
Confidence            9999999999887543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.62  E-value=6.4e-15  Score=91.30  Aligned_cols=89  Identities=19%  Similarity=0.199  Sum_probs=76.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCc
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSANV   61 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i   61 (101)
                      .|||++.+...+......+.++++.....+                     ..+.+++.....++.+++.|+.++|.+++
T Consensus        65 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  144 (291)
T cd05094          65 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF  144 (291)
T ss_pred             CCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            699999999999999999999998543211                     11237788899999999999999999999


Q ss_pred             eeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          62 LHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        62 ~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|+|++|.|++++.++.++++|||++....
T Consensus       145 ~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~  174 (291)
T cd05094         145 VHRDLATRNCLVGANLLVKIGDFGMSRDVY  174 (291)
T ss_pred             eecccCcceEEEccCCcEEECCCCcccccC
Confidence            999999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.62  E-value=4.6e-15  Score=90.67  Aligned_cols=90  Identities=17%  Similarity=0.213  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.++.++++.....+       ....+++.....++.|++.|+.++|+++++|+|++|+|++++.
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~  139 (263)
T cd05052          60 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE  139 (263)
T ss_pred             CCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC
Confidence            589999999999999999999987532211       1134778888899999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||++.....
T Consensus       140 ~~~~kl~df~~~~~~~~  156 (263)
T cd05052         140 NHLVKVADFGLSRLMTG  156 (263)
T ss_pred             CCcEEeCCCcccccccc
Confidence            99999999998876543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=3.7e-15  Score=90.82  Aligned_cols=88  Identities=22%  Similarity=0.297  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.++..+..+..++.++|+.....+     ..+.+++..+..++.|++.|+.++|+.+++|+|++|.|++++.++
T Consensus        55 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~  134 (260)
T cd05611          55 ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG  134 (260)
T ss_pred             CCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            689999999999999999999998644221     224678899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++++|||+++..
T Consensus       135 ~~~l~dfg~~~~~  147 (260)
T cd05611         135 HLKLTDFGLSRNG  147 (260)
T ss_pred             cEEEeecccceec
Confidence            9999999987643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.62  E-value=5.8e-15  Score=89.96  Aligned_cols=89  Identities=21%  Similarity=0.199  Sum_probs=73.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+. ....+.++++.....+     ....+++..+..++.|++.|+.++|.++++|+|++|.|++++.++
T Consensus        54 ~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~  132 (257)
T cd05116          54 DNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH  132 (257)
T ss_pred             CCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC
Confidence            5999999987664 4566778887543212     224578999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||+++.+..
T Consensus       133 ~~kl~Dfg~~~~~~~  147 (257)
T cd05116         133 YAKISDFGLSKALGA  147 (257)
T ss_pred             eEEECCCccccccCC
Confidence            999999999876544

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.62  E-value=8.2e-15  Score=91.45  Aligned_cols=90  Identities=23%  Similarity=0.240  Sum_probs=78.0

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.+...+...+..+.++++......     ....+++..+..++.+++.|+.|+|..+++|+|++|+|++++.+
T Consensus        72 l~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~  151 (307)
T cd06607          72 LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEP  151 (307)
T ss_pred             CCCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCC
Confidence            3699999999999999999999998654221     12457889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       152 ~~~kL~dfg~~~~~~  166 (307)
T cd06607         152 GTVKLADFGSASLVS  166 (307)
T ss_pred             CCEEEeecCcceecC
Confidence            999999999887554

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.61  E-value=7.1e-15  Score=89.05  Aligned_cols=88  Identities=19%  Similarity=0.222  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+..+.++|+......      ....+++.....++.+++.++.++|..+++|+|++|+|++++.+
T Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~  129 (250)
T cd05085          50 DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGEN  129 (250)
T ss_pred             CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCC
Confidence            599999999999999999999998643221      12346788889999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       130 ~~~~l~d~g~~~~~  143 (250)
T cd05085         130 NVLKISDFGMSRQE  143 (250)
T ss_pred             CeEEECCCccceec
Confidence            99999999988653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.61  E-value=2.1e-15  Score=91.18  Aligned_cols=89  Identities=13%  Similarity=0.303  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+......+.++|+.....+     ....+++.....++.+++.|+.++|+.+++|+|++|+|++++.++
T Consensus        43 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~  122 (237)
T cd05576          43 CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG  122 (237)
T ss_pred             CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence            589999999999999999999998654322     224588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++++|||.+....
T Consensus       123 ~~~l~df~~~~~~~  136 (237)
T cd05576         123 HIQLTYFSRWSEVE  136 (237)
T ss_pred             CEEEecccchhccc
Confidence            99999999765443

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.61  E-value=4.7e-15  Score=90.61  Aligned_cols=89  Identities=21%  Similarity=0.279  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+..+.++++......         ....+++..+..++.+++.|+.|+|+++++|+|++|+|+++
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~  139 (267)
T cd08228          60 NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI  139 (267)
T ss_pred             CCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE
Confidence            699999999999988899999987553211         12347888889999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++++|||++..+.
T Consensus       140 ~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228         140 TATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             cCCCCEEECccccceecc
Confidence            999999999999877654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.61  E-value=7.3e-15  Score=89.97  Aligned_cols=90  Identities=19%  Similarity=0.235  Sum_probs=70.1

Q ss_pred             cccceeEEEEEeeCC------CceEEEeeccccccc-----------cccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHSTK------ESLVSFREYSDSHRT-----------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~------~~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|||++.++..+...      ...+.++++......           ....+++.....++.+++.|+.|+|..+++|+|
T Consensus        58 ~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  137 (272)
T cd05075          58 DHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRD  137 (272)
T ss_pred             CCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            699999998765321      234566665432111           113478888999999999999999999999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +||+|++++.++.++|+|||+++.+..
T Consensus       138 lkp~Nil~~~~~~~kl~Dfg~~~~~~~  164 (272)
T cd05075         138 LAARNCMLNENMNVCVADFGLSKKIYN  164 (272)
T ss_pred             cchhheEEcCCCCEEECCCCcccccCc
Confidence            999999999999999999999886643

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.61  E-value=7.2e-15  Score=90.72  Aligned_cols=90  Identities=17%  Similarity=0.268  Sum_probs=74.5

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.+...+...  ...+.++|+.....+     . ...+++..+..++.+++.|+.++|+++++|+|++|+|++++
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~  143 (284)
T cd05079          64 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE  143 (284)
T ss_pred             CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc
Confidence            689999998877664  567788888643222     1 13478888999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++++|||+++.+..
T Consensus       144 ~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079         144 SEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             CCCCEEECCCcccccccc
Confidence            999999999999876543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.61  E-value=5.2e-15  Score=91.67  Aligned_cols=90  Identities=26%  Similarity=0.322  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...  ..++.++++......     ....+++..+..++.|++.|+.|+|..+++|+|++|+||+++.
T Consensus        62 ~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~  141 (293)
T cd07843          62 QHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN  141 (293)
T ss_pred             CCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC
Confidence            499999999888776  889999998653211     1235889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||++..+..
T Consensus       142 ~~~~~l~d~g~~~~~~~  158 (293)
T cd07843         142 RGILKICDFGLAREYGS  158 (293)
T ss_pred             CCcEEEeecCceeeccC
Confidence            99999999998776543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.61  E-value=7.9e-15  Score=88.93  Aligned_cols=91  Identities=23%  Similarity=0.265  Sum_probs=78.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c---------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K---------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|+|++.++..+.....++.++++......     .         ...+++.....++.+++.|+.++|+++++|+|++|
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p  133 (262)
T cd00192          54 GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAA  133 (262)
T ss_pred             CCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCc
Confidence            399999999999999999999998632211     1         25578999999999999999999999999999999


Q ss_pred             CCeEEeeCCCeEEEeeceeccccCc
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +|++++.++.++++|||.+......
T Consensus       134 ~nili~~~~~~~l~dfg~~~~~~~~  158 (262)
T cd00192         134 RNCLVGEDLVVKISDFGLSRDVYDD  158 (262)
T ss_pred             ceEEECCCCcEEEcccccccccccc
Confidence            9999999999999999998876553

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.61  E-value=4e-15  Score=92.04  Aligned_cols=90  Identities=17%  Similarity=0.252  Sum_probs=77.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|++++.+...+..+..++.++++.....+     ....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~  142 (290)
T cd05613          63 QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG  142 (290)
T ss_pred             cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC
Confidence            589999999999988888999988653211     234578888888999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       143 ~~kl~dfg~~~~~~~  157 (290)
T cd05613         143 HVVLTDFGLSKEFHE  157 (290)
T ss_pred             CEEEeeCccceeccc
Confidence            999999998876543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.61  E-value=5.5e-15  Score=92.37  Aligned_cols=88  Identities=22%  Similarity=0.303  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+..++.++.++|+.....+     ..+.+++..+..++.+++.|+.|+|+ .+++|+|++|+|++++.+
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~  136 (308)
T cd06615          57 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR  136 (308)
T ss_pred             CCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC
Confidence            699999999999999999999998654222     22567889999999999999999997 589999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       137 ~~~~l~dfg~~~~~  150 (308)
T cd06615         137 GEIKLCDFGVSGQL  150 (308)
T ss_pred             CcEEEccCCCcccc
Confidence            99999999987654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.61  E-value=8.3e-15  Score=90.19  Aligned_cols=89  Identities=15%  Similarity=0.191  Sum_probs=74.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.. ...+.++++......      ....+++.....++.+++.|+.++|+++++|+|++|+|++++.+
T Consensus        67 ~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~  145 (279)
T cd05057          67 DHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTP  145 (279)
T ss_pred             CCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCC
Confidence            59999999988877 677788887543211      12357899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++++|||+++....
T Consensus       146 ~~~kL~dfg~~~~~~~  161 (279)
T cd05057         146 QHVKITDFGLAKLLDV  161 (279)
T ss_pred             CeEEECCCcccccccC
Confidence            9999999999876543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=6.7e-15  Score=90.57  Aligned_cols=88  Identities=26%  Similarity=0.323  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+..++.++.++++.....+      ....+++..+..++.+++.|+.++|+++++|+|++|+|++++.+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~  139 (280)
T cd06611          60 KHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLD  139 (280)
T ss_pred             CCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCC
Confidence            499999999999999999999998654222      12458899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       140 ~~~~l~d~g~~~~~  153 (280)
T cd06611         140 GDVKLADFGVSAKN  153 (280)
T ss_pred             CCEEEccCccchhh
Confidence            99999999986543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.61  E-value=3.9e-15  Score=91.60  Aligned_cols=89  Identities=24%  Similarity=0.282  Sum_probs=76.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccc---c-----cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHR---T-----KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil   72 (101)
                      ..|||++.++..+...+.++.++++.....   .     ....+++..+..++.|++.|+.++|++ +++|+|++|+|++
T Consensus        57 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil  136 (283)
T cd06617          57 VDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVL  136 (283)
T ss_pred             cCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEE
Confidence            368999999999999999999998854321   1     123578999999999999999999997 9999999999999


Q ss_pred             EeeCCCeEEEeeceeccc
Q psy7276          73 LNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~   90 (101)
                      ++.++.++|+|||++..+
T Consensus       137 ~~~~~~~kl~dfg~~~~~  154 (283)
T cd06617         137 INRNGQVKLCDFGISGYL  154 (283)
T ss_pred             ECCCCCEEEeeccccccc
Confidence            999999999999988754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.61  E-value=4.9e-15  Score=90.02  Aligned_cols=88  Identities=13%  Similarity=0.070  Sum_probs=73.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----ccc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQ-RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.. +..+.++++.....+     ... .+++.....++.+++.|+.|+|.++++|+|++|+|++++.+
T Consensus        59 ~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  137 (259)
T cd05037          59 SHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARY  137 (259)
T ss_pred             CCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecC
Confidence            59999999988877 667888887644322     112 57888899999999999999999999999999999999987


Q ss_pred             C-------CeEEEeeceecccc
Q psy7276          77 C-------DLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~-------~~~i~dfgl~~~~~   91 (101)
                      +       .++++|||++....
T Consensus       138 ~~~~~~~~~~kl~Dfg~a~~~~  159 (259)
T cd05037         138 GLNEGYVPFIKLSDPGIPITVL  159 (259)
T ss_pred             ccccCCceeEEeCCCCcccccc
Confidence            7       79999999987643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.61  E-value=7.7e-15  Score=91.09  Aligned_cols=88  Identities=23%  Similarity=0.310  Sum_probs=75.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-----------------YQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|||++.++..+......+.++|+.......                 ...+++.....++.+++.|+.++|+.+++|+|
T Consensus        75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d  154 (295)
T cd05097          75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD  154 (295)
T ss_pred             CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence            5899999999999999999999985432110                 01356778888999999999999999999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      ++|+|++++.++.++++|||++...
T Consensus       155 lkp~Nill~~~~~~kl~dfg~~~~~  179 (295)
T cd05097         155 LATRNCLVGNHYTIKIADFGMSRNL  179 (295)
T ss_pred             cChhhEEEcCCCcEEeccccccccc
Confidence            9999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0666|consensus

Probab=99.61  E-value=5.5e-16  Score=96.27  Aligned_cols=90  Identities=28%  Similarity=0.413  Sum_probs=75.7

Q ss_pred             cccceeEEEEEeeC-CCceEEEeecccccc--------c-cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHST-KESLVSFREYSDSHR--------T-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+.+ ...++++.||.+...        . ....++...+..++.|++.|+.|+|++=++|||+||.||+
T Consensus        85 ~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIl  164 (438)
T KOG0666|consen   85 KHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANIL  164 (438)
T ss_pred             cCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEE
Confidence            58999999988887 788888888854321        1 1134778899999999999999999999999999999999


Q ss_pred             EeeC----CCeEEEeeceeccccC
Q psy7276          73 LNTT----CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        73 ~~~~----~~~~i~dfgl~~~~~~   92 (101)
                      +-.+    |.+||+|+|+++.+.+
T Consensus       165 vmgdgperG~VKIaDlGlaR~~~~  188 (438)
T KOG0666|consen  165 VMGDGPERGRVKIADLGLARLFNN  188 (438)
T ss_pred             EeccCCccCeeEeecccHHHHhhc
Confidence            9766    8899999999997654

>KOG0668|consensus

Probab=99.61  E-value=6e-16  Score=92.81  Aligned_cols=98  Identities=24%  Similarity=0.418  Sum_probs=74.9

Q ss_pred             CCcccceeEEEEEeeCCCc--eEEEeeccccccc--cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           1 MGFHQDQITIEIRHSTKES--LVSFREYSDSHRT--KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~~~~--l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +++||||+.+...-..+.+  -.++.|+......  -...++...+..++.+++.|+.|||+.||.|||+||.|++++..
T Consensus        89 L~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~  168 (338)
T KOG0668|consen   89 LRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE  168 (338)
T ss_pred             ccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh
Confidence            3578999998776654433  2233443221111  11346777888999999999999999999999999999999875


Q ss_pred             -CCeEEEeeceeccccCcccccc
Q psy7276          77 -CDLKFFFYFFFSFFFHFTVHDV   98 (101)
Q Consensus        77 -~~~~i~dfgl~~~~~~~~~~~~   98 (101)
                       ..++++|+|+|-++-|+.+|+.
T Consensus       169 ~rkLrlIDWGLAEFYHp~~eYnV  191 (338)
T KOG0668|consen  169 LRKLRLIDWGLAEFYHPGKEYNV  191 (338)
T ss_pred             hceeeeeecchHhhcCCCceeee
Confidence             5799999999999999988875

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.60  E-value=5.9e-15  Score=102.57  Aligned_cols=88  Identities=24%  Similarity=0.302  Sum_probs=74.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK----------------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l   66 (101)
                      .|||++.++..+..++..+.++++.....+.                ....+...+..++.+++.|+.++|+.+++|+|+
T Consensus        60 ~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDL  139 (932)
T PRK13184         60 IHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDL  139 (932)
T ss_pred             CCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            5999999999999999999999985432110                012345567788999999999999999999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      ||+||+++.++.++++|||+++..
T Consensus       140 KPeNILLd~dg~vKLiDFGLAk~i  163 (932)
T PRK13184        140 KPDNILLGLFGEVVILDWGAAIFK  163 (932)
T ss_pred             chheEEEcCCCCEEEEecCcceec
Confidence            999999999999999999998865

>KOG0596|consensus

Probab=99.60  E-value=4.6e-15  Score=97.43  Aligned_cols=92  Identities=25%  Similarity=0.265  Sum_probs=75.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccc---cccccccCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSD---SHRTKYQRL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      -+|.+++.+++..++.+.++++||+.+   .+.++.+..  .--.+..+..|++.++.++|+.||+|.||||.|+|+ ..
T Consensus       417 kg~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-Vk  495 (677)
T KOG0596|consen  417 KGHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VK  495 (677)
T ss_pred             cCCceEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-Ee
Confidence            357899999999999999999999843   333333322  222777899999999999999999999999999997 46


Q ss_pred             CCeEEEeeceeccccCcc
Q psy7276          77 CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~   94 (101)
                      |.+||+|||.|.-+.++.
T Consensus       496 G~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  496 GRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             eeEEeeeechhcccCccc
Confidence            899999999998777653

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.60  E-value=8e-15  Score=92.30  Aligned_cols=85  Identities=19%  Similarity=0.255  Sum_probs=73.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+..+..++.++++......       ....+++..+..++.+++.|+.|+|..+++|+|++|+|++++.
T Consensus        57 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~  136 (327)
T cd08227          57 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV  136 (327)
T ss_pred             CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec
Confidence            699999999999999999999998653211       1234788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeecee
Q psy7276          76 TCDLKFFFYFFF   87 (101)
Q Consensus        76 ~~~~~i~dfgl~   87 (101)
                      ++.+++.||+..
T Consensus       137 ~~~~~l~~~~~~  148 (327)
T cd08227         137 DGKVYLSGLRSN  148 (327)
T ss_pred             CCcEEEcccchh
Confidence            999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0984|consensus

Probab=99.60  E-value=2.7e-15  Score=88.76  Aligned_cols=88  Identities=20%  Similarity=0.265  Sum_probs=74.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc--------ccccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR--------TKYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil~   73 (101)
                      .+|..|.+++.+..-+++++.||....+.        ...+..+|...-+++..+..|+.|+|++ .++|||+||.|+|+
T Consensus       103 ~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI  182 (282)
T KOG0984|consen  103 DCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI  182 (282)
T ss_pred             CCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE
Confidence            36788888988889999999998644321        1335678888999999999999999975 89999999999999


Q ss_pred             eeCCCeEEEeeceeccc
Q psy7276          74 NTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~   90 (101)
                      +.+|.+|++|||.+-.+
T Consensus       183 n~~GqVKiCDFGIsG~L  199 (282)
T KOG0984|consen  183 NYDGQVKICDFGISGYL  199 (282)
T ss_pred             ccCCcEEEcccccceee
Confidence            99999999999986544

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.60  E-value=1.1e-14  Score=90.47  Aligned_cols=89  Identities=22%  Similarity=0.325  Sum_probs=74.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K------------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l   66 (101)
                      .|+|++.++..+...+..+.++++.....+    .            ...+++.....++.+++.|+.++|+.+++|+|+
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl  156 (296)
T cd05095          77 KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDL  156 (296)
T ss_pred             CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence            589999999999999999999987542111    0            013566788899999999999999999999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceecccc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|+|++++.++.++++|||+++.+.
T Consensus       157 kp~Nili~~~~~~~l~dfg~~~~~~  181 (296)
T cd05095         157 ATRNCLVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             ChheEEEcCCCCEEeccCccccccc
Confidence            9999999999999999999987553

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.60  E-value=7.8e-15  Score=90.47  Aligned_cols=89  Identities=22%  Similarity=0.287  Sum_probs=73.8

Q ss_pred             cccceeEEEEEee-----CCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHS-----TKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||++.++..+.     .++.++.++++.....+         ....+++..+..++.+++.|+.++|+.+++|+|++|
T Consensus        73 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp  152 (286)
T cd06638          73 DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKG  152 (286)
T ss_pred             cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCH
Confidence            6999999988763     44567888887543211         224578888999999999999999999999999999


Q ss_pred             CCeEEeeCCCeEEEeeceecccc
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|++++.++.++++|||++..+.
T Consensus       153 ~nili~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638         153 NNILLTTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             HhEEECCCCCEEEccCCceeecc
Confidence            99999999999999999987654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PHA02988 hypothetical protein; Provisional

Probab=99.60  E-value=7.3e-15  Score=91.00  Aligned_cols=88  Identities=16%  Similarity=0.070  Sum_probs=73.9

Q ss_pred             cccceeEEEEEeeC----CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHST----KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+..    ...++.++|++....+     ..+.+++.....++.+++.|+.++|. .+++|+|++|+|++
T Consensus        76 ~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nil  155 (283)
T PHA02988         76 DSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFL  155 (283)
T ss_pred             CCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEE
Confidence            69999999988765    4567889998664322     22457888889999999999999998 48999999999999


Q ss_pred             EeeCCCeEEEeeceeccc
Q psy7276          73 LNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~   90 (101)
                      ++.++.++++|||+++.+
T Consensus       156 l~~~~~~kl~dfg~~~~~  173 (283)
T PHA02988        156 VTENYKLKIICHGLEKIL  173 (283)
T ss_pred             ECCCCcEEEcccchHhhh
Confidence            999999999999998754

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.60  E-value=2.3e-15  Score=93.73  Aligned_cols=89  Identities=25%  Similarity=0.342  Sum_probs=77.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+..++..+.++++....    ......+++..+..++.+++.|+.++|+.+++|+|++++|++++.++.
T Consensus        76 ~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~  155 (297)
T cd06659          76 QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR  155 (297)
T ss_pred             CCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCc
Confidence            5999999999999999999999975432    222346789999999999999999999999999999999999999999


Q ss_pred             eEEEeeceecccc
Q psy7276          79 LKFFFYFFFSFFF   91 (101)
Q Consensus        79 ~~i~dfgl~~~~~   91 (101)
                      ++|+|||++....
T Consensus       156 ~kL~dfg~~~~~~  168 (297)
T cd06659         156 VKLSDFGFCAQIS  168 (297)
T ss_pred             EEEeechhHhhcc
Confidence            9999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.60  E-value=6e-15  Score=91.51  Aligned_cols=90  Identities=29%  Similarity=0.374  Sum_probs=77.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc---c-ccc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR---T-KYQ-RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~---~-~~~-~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.++..+.....++.++++.....   . ... .+++..+..++.|++.|+.++|+.+++|+|++|+||+++.++
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~  139 (298)
T cd07841          60 KHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG  139 (298)
T ss_pred             CCCCChhhhheeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC
Confidence            58999999999999888999999873321   1 112 588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||+++....
T Consensus       140 ~~~l~dfg~~~~~~~  154 (298)
T cd07841         140 VLKLADFGLARSFGS  154 (298)
T ss_pred             CEEEccceeeeeccC
Confidence            999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG1152|consensus

Probab=99.60  E-value=1.5e-15  Score=100.27  Aligned_cols=90  Identities=14%  Similarity=0.182  Sum_probs=77.2

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccc-----cccc-cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSD-----SHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      |+||+++...|++++.+++.++.-.     .... ....++|..+..++.|+.-|+++||++||+|||+|-+|+.++.+|
T Consensus       628 H~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g  707 (772)
T KOG1152|consen  628 HENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG  707 (772)
T ss_pred             ccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence            8999999999999999998887521     1111 235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .+|++|||-+....++
T Consensus       708 ~~klidfgsaa~~ksg  723 (772)
T KOG1152|consen  708 FVKLIDFGSAAYTKSG  723 (772)
T ss_pred             eEEEeeccchhhhcCC
Confidence            9999999987754443

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.60  E-value=2.9e-15  Score=90.98  Aligned_cols=87  Identities=30%  Similarity=0.418  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+.....++.++++......     ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~  135 (260)
T PF00069_consen   56 RHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG  135 (260)
T ss_dssp             TBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            589999999999999999999998765222     246789999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecc
Q psy7276          78 DLKFFFYFFFSF   89 (101)
Q Consensus        78 ~~~i~dfgl~~~   89 (101)
                      .++++|||.+..
T Consensus       136 ~~~l~Dfg~~~~  147 (260)
T PF00069_consen  136 EVKLIDFGSSVK  147 (260)
T ss_dssp             EEEESSGTTTEE
T ss_pred             cccccccccccc
Confidence            999999998865

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.60  E-value=1.1e-14  Score=89.76  Aligned_cols=90  Identities=21%  Similarity=0.301  Sum_probs=73.1

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.+...+..  ...++.++++.....+     . ...+++..+..++.+++.|+.++|.++++|+|++|+|++++
T Consensus        63 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~  142 (284)
T cd05081          63 QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE  142 (284)
T ss_pred             CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC
Confidence            69999999876543  3467788887543211     1 23478889999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++++|||++.....
T Consensus       143 ~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081         143 SENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             CCCeEEECCCcccccccC
Confidence            999999999999886543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.60  E-value=1.2e-14  Score=90.04  Aligned_cols=88  Identities=32%  Similarity=0.347  Sum_probs=73.4

Q ss_pred             cccceeEEEEEeeCCCc-----eEEEeecccccccc---------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHSTKES-----LVSFREYSDSHRTK---------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||++.+...+.....     ++.++++.......         ...+++..+..++.|++.|+.|+|..+++|+|++|
T Consensus        59 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~  138 (295)
T cd07837          59 ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKP  138 (295)
T ss_pred             CCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCh
Confidence            57999999988876655     78888876542211         13478899999999999999999999999999999


Q ss_pred             CCeEEee-CCCeEEEeeceeccc
Q psy7276          69 SNLLLNT-TCDLKFFFYFFFSFF   90 (101)
Q Consensus        69 ~nil~~~-~~~~~i~dfgl~~~~   90 (101)
                      +|++++. ++.++++|||++..+
T Consensus       139 ~nil~~~~~~~~kl~dfg~~~~~  161 (295)
T cd07837         139 QNLLVDKQKGLLKIADLGLGRAF  161 (295)
T ss_pred             HHEEEecCCCeEEEeecccceec
Confidence            9999998 789999999988754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.60  E-value=1.2e-14  Score=88.34  Aligned_cols=90  Identities=24%  Similarity=0.366  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.+...+...+.++.+++++....+       ....+++..+..++.+++.++.++|+.+++|+|++|+|++++.
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~  136 (256)
T cd08221          57 QHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK  136 (256)
T ss_pred             CCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC
Confidence            599999999999999999999998643211       1235788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||++.....
T Consensus       137 ~~~~kl~d~~~~~~~~~  153 (256)
T cd08221         137 AGLIKLGDFGISKILGS  153 (256)
T ss_pred             CCCEEECcCcceEEccc
Confidence            99999999998876544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.60  E-value=5.7e-15  Score=92.26  Aligned_cols=88  Identities=19%  Similarity=0.233  Sum_probs=76.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+..+.++++......       ....+++.....++.+++.|+.|+|+.+++|+|++|+|++++.
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~  136 (314)
T cd08216          57 QHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG  136 (314)
T ss_pred             CCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec
Confidence            599999999999999999999998653211       1235788889999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||.+..+
T Consensus       137 ~~~~kl~d~~~~~~~  151 (314)
T cd08216         137 DGKVVLSGLRYSVSM  151 (314)
T ss_pred             CCceEEecCccceee
Confidence            999999999977644

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.60  E-value=1.6e-15  Score=94.16  Aligned_cols=88  Identities=22%  Similarity=0.391  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.+...+..++..+.++++......    ..+.+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++.
T Consensus        77 ~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~  156 (292)
T cd06658          77 HHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR  156 (292)
T ss_pred             CCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC
Confidence            689999999999999999999998654322    2356788999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccc
Q psy7276          79 LKFFFYFFFSFF   90 (101)
Q Consensus        79 ~~i~dfgl~~~~   90 (101)
                      ++++|||++...
T Consensus       157 ~kL~dfg~~~~~  168 (292)
T cd06658         157 IKLSDFGFCAQV  168 (292)
T ss_pred             EEEccCcchhhc
Confidence            999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.60  E-value=8.1e-15  Score=89.42  Aligned_cols=90  Identities=12%  Similarity=0.041  Sum_probs=75.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+..+...+.++|++....+      ....+++.....++.|++.|+.++|+.+++|+|++|+|++++.+
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~  136 (258)
T cd05078          57 SHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIRE  136 (258)
T ss_pred             CCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecc
Confidence            599999999999998899999998654322      12347888888999999999999999999999999999999876


Q ss_pred             CC--------eEEEeeceeccccC
Q psy7276          77 CD--------LKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~--------~~i~dfgl~~~~~~   92 (101)
                      +.        ++++|||++....+
T Consensus       137 ~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078         137 EDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             cccccCCCceEEecccccccccCC
Confidence            54        69999998765544

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.60  E-value=5.1e-15  Score=92.34  Aligned_cols=89  Identities=26%  Similarity=0.353  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc--------c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT--------K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.+...+...  ..++.++|+......        . ...+++..+..++.|++.|+.|+|+.+++|+|++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Ni  139 (316)
T cd07842          60 KHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANI  139 (316)
T ss_pred             CCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHE
Confidence            699999999999887  788899998643221        1 12578889999999999999999999999999999999


Q ss_pred             EEee----CCCeEEEeeceecccc
Q psy7276          72 LLNT----TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        72 l~~~----~~~~~i~dfgl~~~~~   91 (101)
                      +++.    ++.++++|||++....
T Consensus       140 l~~~~~~~~~~~kl~Dfg~~~~~~  163 (316)
T cd07842         140 LVMGEGPERGVVKIGDLGLARLFN  163 (316)
T ss_pred             EEcCCCCccceEEECCCccccccC
Confidence            9998    8899999999887653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.60  E-value=8.6e-15  Score=89.64  Aligned_cols=90  Identities=27%  Similarity=0.371  Sum_probs=73.9

Q ss_pred             CcccceeEEEEEeeCC------CceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           2 GFHQDQITIEIRHSTK------ESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~------~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      ..|||++.+...+...      ..++.++++.....+       ....+++..+..++.|++.|+.|+|+++++|+|+++
T Consensus        60 ~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~  139 (272)
T cd06637          60 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKG  139 (272)
T ss_pred             cCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence            4699999999887642      347788888643211       123578888999999999999999999999999999


Q ss_pred             CCeEEeeCCCeEEEeeceecccc
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|++++.++.++++|||++....
T Consensus       140 ~nili~~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637         140 QNVLLTENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             HHEEECCCCCEEEccCCCceecc
Confidence            99999999999999999987543

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=1.2e-14  Score=89.28  Aligned_cols=91  Identities=22%  Similarity=0.290  Sum_probs=78.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+..+...+.++++.....    ...+.+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++.
T Consensus        60 ~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~  139 (277)
T cd06917          60 QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN  139 (277)
T ss_pred             CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC
Confidence            59999999999998888999999764322    22346788999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      ++++|||++..+...
T Consensus       140 ~~l~dfg~~~~~~~~  154 (277)
T cd06917         140 VKLCDFGVAALLNQN  154 (277)
T ss_pred             EEEccCCceeecCCC
Confidence            999999988765543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.60  E-value=1.3e-14  Score=88.77  Aligned_cols=88  Identities=25%  Similarity=0.317  Sum_probs=74.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.+..+++++....+     .  ...+++.....++.+++.|+.|+|+++++|+++++.|++++.
T Consensus        59 ~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~  138 (259)
T PF07714_consen   59 RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS  138 (259)
T ss_dssp             SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            699999999999988889999998654322     1  246889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.+||+|||++...
T Consensus       139 ~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen  139 NGQVKLSDFGLSRPI  153 (259)
T ss_dssp             TTEEEEESTTTGEET
T ss_pred             ccccccccccccccc
Confidence            999999999988766

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.60  E-value=1.2e-14  Score=88.47  Aligned_cols=88  Identities=17%  Similarity=0.175  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.++..+......+.++++......     ..  ..+++.....++.+++.|+.++|..+++|+|++|+|++++.
T Consensus        58 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~  137 (256)
T cd05039          58 RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE  137 (256)
T ss_pred             CCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC
Confidence            589999999999888888999987643221     11  25788999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||.++..
T Consensus       138 ~~~~~l~d~g~~~~~  152 (256)
T cd05039         138 DLVAKVSDFGLAKEA  152 (256)
T ss_pred             CCCEEEccccccccc
Confidence            999999999988765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.59  E-value=7.4e-15  Score=91.32  Aligned_cols=89  Identities=20%  Similarity=0.169  Sum_probs=65.5

Q ss_pred             cccceeEEEEEeeCCCc----eEEEeeccccc---cc-cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKES----LVSFREYSDSH---RT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~----l~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|++++.++........    .+.+++.....   .. .....++..+..++.|++.|+.++|+.+++|||+||+|++++
T Consensus        81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~  160 (294)
T PHA02882         81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD  160 (294)
T ss_pred             CCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence            47888888765543321    12333332111   11 112356778889999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||+++.+.
T Consensus       161 ~~~~~~l~DFGla~~~~  177 (294)
T PHA02882        161 GNNRGYIIDYGIASHFI  177 (294)
T ss_pred             CCCcEEEEEcCCceeec
Confidence            99999999999988664

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.59  E-value=1.3e-14  Score=89.53  Aligned_cols=89  Identities=20%  Similarity=0.192  Sum_probs=75.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc--------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCce
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK--------------------YQRLSNDHICYFLYQILRGLKYIHSANVL   62 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~   62 (101)
                      .|+|++.+...+......+.++++.....+.                    ...+++..+..++.|++.|+.|+|+.+++
T Consensus        65 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~  144 (280)
T cd05092          65 QHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFV  144 (280)
T ss_pred             CCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            6999999999999888889999875422110                    02367888899999999999999999999


Q ss_pred             eccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          63 HRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        63 ~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      |+|++|+|++++.++.++++|||++..+.
T Consensus       145 H~dlkp~nil~~~~~~~kL~dfg~~~~~~  173 (280)
T cd05092         145 HRDLATRNCLVGQGLVVKIGDFGMSRDIY  173 (280)
T ss_pred             cccccHhhEEEcCCCCEEECCCCceeEcC
Confidence            99999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.59  E-value=1.4e-14  Score=89.21  Aligned_cols=88  Identities=15%  Similarity=0.185  Sum_probs=70.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cc--cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RT--KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+... ....++++....    ..  ..+.+++..+..++.+++.|+.|+|+++++|+|++|+|++++.+
T Consensus        67 ~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~  145 (279)
T cd05109          67 GSPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP  145 (279)
T ss_pred             CCCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC
Confidence            589999988877654 345566653321    11  12457889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||+++.+.
T Consensus       146 ~~~kL~dfG~~~~~~  160 (279)
T cd05109         146 NHVKITDFGLARLLD  160 (279)
T ss_pred             CcEEECCCCceeecc
Confidence            999999999987654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.59  E-value=1.4e-14  Score=88.32  Aligned_cols=89  Identities=20%  Similarity=0.229  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+......+.++++.....+       ....+++.....++.+++.|+.++|+++++|+|++|+|++++.
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~  139 (261)
T cd05148          60 RHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE  139 (261)
T ss_pred             CCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC
Confidence            589999999999999999999998643211       1235788889999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++....
T Consensus       140 ~~~~kl~d~g~~~~~~  155 (261)
T cd05148         140 DLVCKVADFGLARLIK  155 (261)
T ss_pred             CceEEEccccchhhcC
Confidence            9999999999887543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.59  E-value=5.3e-15  Score=90.37  Aligned_cols=89  Identities=22%  Similarity=0.301  Sum_probs=76.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+..++..+.++++......         ....+++..+..++.+++.|+.++|+++++|+|++|+|+++
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili  139 (267)
T cd08229          60 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI  139 (267)
T ss_pred             cCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence            589999999999999999999987543211         12457888999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++++|||++..+.
T Consensus       140 ~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229         140 TATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             cCCCCEEECcchhhhccc
Confidence            999999999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.59  E-value=1.8e-14  Score=88.46  Aligned_cols=88  Identities=20%  Similarity=0.218  Sum_probs=75.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----ccc---------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQ---------RLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||++.+...+......+.+++++....+     ...         .+++..+..++.+++.|+.|+|+.+++|+|++|
T Consensus        66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp  145 (275)
T cd05046          66 SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAA  145 (275)
T ss_pred             CCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCcc
Confidence            589999999999888888999998653211     112         578999999999999999999999999999999


Q ss_pred             CCeEEeeCCCeEEEeeceeccc
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      +|++++.++.++++|||++...
T Consensus       146 ~Nili~~~~~~~l~~~~~~~~~  167 (275)
T cd05046         146 RNCLVSSQREVKVSLLSLSKDV  167 (275)
T ss_pred             ceEEEeCCCcEEEccccccccc
Confidence            9999999999999999987643

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.59  E-value=1.2e-14  Score=88.21  Aligned_cols=91  Identities=25%  Similarity=0.335  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----ccc-C-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQ-R-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~-~-~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.++..+...+..+.++++......     ... . +++..+..++.|++.|+.++|+.+++|+|++|+|++++.
T Consensus        59 ~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~  138 (258)
T smart00219       59 DHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE  138 (258)
T ss_pred             CCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc
Confidence            689999999999999999999998643211     112 2 889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++++|||++......
T Consensus       139 ~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219      139 NLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             CCeEEEcccCCceecccc
Confidence            999999999998765543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.59  E-value=1.8e-14  Score=88.67  Aligned_cols=90  Identities=23%  Similarity=0.252  Sum_probs=78.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+..+...+.++++.....    .....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++.
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~  139 (277)
T cd06640          60 DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD  139 (277)
T ss_pred             CCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCC
Confidence            69999999999999999999999864322    23356788888899999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      ++++|||++.....
T Consensus       140 ~~l~dfg~~~~~~~  153 (277)
T cd06640         140 VKLADFGVAGQLTD  153 (277)
T ss_pred             EEEcccccceeccC
Confidence            99999999876544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.59  E-value=2.2e-14  Score=92.90  Aligned_cols=55  Identities=27%  Similarity=0.387  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +++.....++.+++.|+.|+|..+++|+|++|+|++++.++.++++|||+++.+.
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~  290 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIM  290 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecc
Confidence            4556677889999999999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG4279|consensus

Probab=99.59  E-value=2.3e-15  Score=101.64  Aligned_cols=91  Identities=26%  Similarity=0.326  Sum_probs=78.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cc--cccCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RT--KYQRL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~--~~~~~--~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|+|||.+.+++.++|.+.++||.....    .+  .++++  .|.....|..|+++|+.|+|.+.|+|||+|.+|+|++
T Consensus       630 rHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN  709 (1226)
T KOG4279|consen  630 RHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN  709 (1226)
T ss_pred             hhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe
Confidence            5899999999999999999999974432    22  44677  6888899999999999999999999999999999997


Q ss_pred             e-CCCeEEEeeceeccccCc
Q psy7276          75 T-TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~-~~~~~i~dfgl~~~~~~~   93 (101)
                      . .|.+||+|||-++.+..-
T Consensus       710 TySGvlKISDFGTsKRLAgi  729 (1226)
T KOG4279|consen  710 TYSGVLKISDFGTSKRLAGI  729 (1226)
T ss_pred             eccceEEecccccchhhccC
Confidence            6 589999999998876544

>KOG0577|consensus

Probab=99.59  E-value=6.3e-16  Score=102.60  Aligned_cols=98  Identities=23%  Similarity=0.209  Sum_probs=86.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||.+.+-.+|......+++|+||.++-.     ..+++.+..+..+..+.+.|+.|+|+.+.||||+|..|||+.+.|
T Consensus        84 ~HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g  163 (948)
T KOG0577|consen   84 RHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG  163 (948)
T ss_pred             cCCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC
Confidence            699999999999999999999999876532     235688888889999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCcccccccc
Q psy7276          78 DLKFFFYFFFSFFFHFTVHDVTK  100 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~~~~~~~~  100 (101)
                      .+|++|||-+..+.|...+-.|+
T Consensus       164 ~VKLaDFGSAsi~~PAnsFvGTP  186 (948)
T KOG0577|consen  164 LVKLADFGSASIMAPANSFVGTP  186 (948)
T ss_pred             eeeeccccchhhcCchhcccCCc
Confidence            99999999998888877666553

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.59  E-value=2.8e-14  Score=89.49  Aligned_cols=90  Identities=24%  Similarity=0.268  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+......+.++++......     ....+++..+..++.+++.|+.++|..+++|+|++|+|++++.++
T Consensus        83 ~h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~  162 (317)
T cd06635          83 KHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG  162 (317)
T ss_pred             CCCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC
Confidence            599999999999999899999998654211     224578888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       163 ~~kl~dfg~~~~~~~  177 (317)
T cd06635         163 QVKLADFGSASIASP  177 (317)
T ss_pred             CEEEecCCCccccCC
Confidence            999999998765443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.58  E-value=8.7e-15  Score=90.19  Aligned_cols=91  Identities=25%  Similarity=0.398  Sum_probs=79.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.++..+..++.++.++++......     ....+++..+..++.+++.|+.++|..+++|+|++++|++++.++
T Consensus        58 ~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~  137 (288)
T cd07833          58 RHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG  137 (288)
T ss_pred             CCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            489999999999999999999998765432     224588899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++|||++......
T Consensus       138 ~~kl~d~g~~~~~~~~  153 (288)
T cd07833         138 VLKLCDFGFARALRAR  153 (288)
T ss_pred             CEEEEeeecccccCCC
Confidence            9999999987765443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG4645|consensus

Probab=99.58  E-value=7.6e-16  Score=108.28  Aligned_cols=92  Identities=22%  Similarity=0.245  Sum_probs=80.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc----c-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY----Q-RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      -.|||+|.+++.....+.++++||+|....+..    + ..++.....+-.|+++|+.++|..||+|||+||.||+++.+
T Consensus      1291 lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1291 LNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN 1370 (1509)
T ss_pred             ccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC
Confidence            379999999999999999999999987654422    3 35566777888999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      |.+|.+|||.|..+.++
T Consensus      1371 g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1371 GLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             CcEEeecccceeEecCc
Confidence            99999999999988776

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.58  E-value=1.6e-14  Score=89.23  Aligned_cols=89  Identities=17%  Similarity=0.187  Sum_probs=74.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c-----------------------ccCCCHHHHHHHHHHHHHHHHH
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------------------YQRLSNDHICYFLYQILRGLKY   55 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------------------~~~~~~~~~~~~~~~i~~~l~~   55 (101)
                      .|||++.++..+..+...+.++++.....+    .                       ...+++..+..++.+++.|+.+
T Consensus        66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~  145 (288)
T cd05050          66 DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAY  145 (288)
T ss_pred             CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence            599999999999988888999987543211    0                       0135677888999999999999


Q ss_pred             HHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          56 IHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        56 ~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|.++++|+|++|.|++++.++.++++|||++..+.
T Consensus       146 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         146 LSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY  181 (288)
T ss_pred             HHhCCeecccccHhheEecCCCceEECccccceecc
Confidence            999999999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.58  E-value=1.4e-14  Score=88.32  Aligned_cols=90  Identities=19%  Similarity=0.284  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+..++.++++.....+     +...+++..+..++.+++.|+.++|+++++|+|++++|++++.++
T Consensus        51 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~  130 (262)
T cd05572          51 NHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG  130 (262)
T ss_pred             CCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC
Confidence            599999999999999999999998543222     224578888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       131 ~~~l~df~~~~~~~~  145 (262)
T cd05572         131 YVKLVDFGFAKKLKS  145 (262)
T ss_pred             CEEEeeCCcccccCc
Confidence            999999999876544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.58  E-value=6.5e-15  Score=90.73  Aligned_cols=89  Identities=30%  Similarity=0.394  Sum_probs=77.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+...+..+.++++......      ....+++..+..++.+++.|+.|+|..+++|+|++|+|++++.+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~  136 (284)
T cd07860          57 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE  136 (284)
T ss_pred             CCCCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            599999999999999999999998643211      12457889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       137 ~~~~l~dfg~~~~~~  151 (284)
T cd07860         137 GAIKLADFGLARAFG  151 (284)
T ss_pred             CCEEEeeccchhhcc
Confidence            999999999877543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=1.2e-14  Score=90.97  Aligned_cols=90  Identities=21%  Similarity=0.236  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .||+++.++..+......+.++++.....+       ....+++.....++.|++.|+.|+|..+++|+|++|+|++++.
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~  138 (316)
T cd05574          59 DHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE  138 (316)
T ss_pred             CCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC
Confidence            489999999999999999999997543211       1245888999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||++.....
T Consensus       139 ~~~~~l~dfg~~~~~~~  155 (316)
T cd05574         139 SGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             CCCEEEeecchhhcccc
Confidence            99999999998876543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.58  E-value=2.7e-14  Score=86.93  Aligned_cols=88  Identities=19%  Similarity=0.215  Sum_probs=72.6

Q ss_pred             cccceeEEEEEe-eCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRH-STKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~-~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|++++.+...+ ..++..+.++++.....+       ....+++..+..++.+++.|+.++|+++++|+|++|+|++++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~  136 (256)
T cd05082          57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS  136 (256)
T ss_pred             CCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc
Confidence            589999998765 455677888887643211       112377888899999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccc
Q psy7276          75 TTCDLKFFFYFFFSFF   90 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~   90 (101)
                      .++.++++|||+++..
T Consensus       137 ~~~~~kl~dfg~~~~~  152 (256)
T cd05082         137 EDNVAKVSDFGLTKEA  152 (256)
T ss_pred             CCCcEEecCCccceec
Confidence            9999999999987754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.58  E-value=1.5e-14  Score=89.03  Aligned_cols=88  Identities=33%  Similarity=0.503  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.++.++++.......       ...+++..+..++.+++.|+.++|+.+++|+|++|+|++++.
T Consensus        56 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~  135 (284)
T cd07836          56 KHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK  135 (284)
T ss_pred             cCCCEeeeeeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC
Confidence            5999999999999999999999986543221       135789999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||++...
T Consensus       136 ~~~~~l~d~g~~~~~  150 (284)
T cd07836         136 RGELKLADFGLARAF  150 (284)
T ss_pred             CCcEEEeecchhhhh
Confidence            999999999987644

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.58  E-value=1.7e-14  Score=89.14  Aligned_cols=89  Identities=16%  Similarity=0.179  Sum_probs=75.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc---------ccccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR---------TKYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil   72 (101)
                      .|||++.++..+...+..+.++++.....         .....+++..+..++.+++.|+.|+|+. +++|+|++|+|++
T Consensus        61 ~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil  140 (288)
T cd06616          61 DCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNIL  140 (288)
T ss_pred             CCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEE
Confidence            59999999999988888888888743211         1125688899999999999999999974 9999999999999


Q ss_pred             EeeCCCeEEEeeceecccc
Q psy7276          73 LNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++.++.++++|||++....
T Consensus       141 ~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616         141 LDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             EccCCcEEEeecchhHHhc
Confidence            9999999999999987543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.58  E-value=2.4e-14  Score=86.87  Aligned_cols=90  Identities=26%  Similarity=0.328  Sum_probs=78.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+.....++.++++.....+      ....+++..+..++.+++.|+.++|..+++|+|++|.|++++.+
T Consensus        56 ~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~  135 (256)
T cd06612          56 DSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEE  135 (256)
T ss_pred             CCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCC
Confidence            699999999999999999999998654322      12457899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++++|||++.....
T Consensus       136 ~~~~l~dfg~~~~~~~  151 (256)
T cd06612         136 GQAKLADFGVSGQLTD  151 (256)
T ss_pred             CcEEEcccccchhccc
Confidence            9999999998876544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0200|consensus

Probab=99.58  E-value=5.6e-15  Score=99.78  Aligned_cols=97  Identities=21%  Similarity=0.331  Sum_probs=83.1

Q ss_pred             CCcccceeEEEEEeeCCCceEEEeeccccccc----ccc-----------------CCCHHHHHHHHHHHHHHHHHHHHC
Q psy7276           1 MGFHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQ-----------------RLSNDHICYFLYQILRGLKYIHSA   59 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~-----------------~~~~~~~~~~~~~i~~~l~~~h~~   59 (101)
                      +|.|+|++.+.+.+.+.+.++.+.|++....+    +..                 .+...+...++.|++.|++|+.+.
T Consensus       358 ~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~  437 (609)
T KOG0200|consen  358 LGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV  437 (609)
T ss_pred             hcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence            47899999999999999999999998643211    112                 277889999999999999999999


Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceeccccCccccc
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVHD   97 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~~~~   97 (101)
                      .++|||+..+|+|+..+..+||+|||+++...+...|.
T Consensus       438 ~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~  475 (609)
T KOG0200|consen  438 PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYR  475 (609)
T ss_pred             CccchhhhhhhEEecCCCEEEEccccceeccCCCCceE
Confidence            99999999999999999999999999999766665554

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.58  E-value=1.8e-14  Score=87.56  Aligned_cols=89  Identities=22%  Similarity=0.295  Sum_probs=75.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c-c-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-Y-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~-~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+.. ..++.++++.....+     + . ..+++.....++.+++.|+.++|..+++|+|++|+|++++.
T Consensus        54 ~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~  132 (257)
T cd05040          54 DHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS  132 (257)
T ss_pred             CCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec
Confidence            58999999988887 778888887532211     1 1 35788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||+++.+..
T Consensus       133 ~~~~kl~dfg~~~~~~~  149 (257)
T cd05040         133 DDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             CCEEEeccccccccccc
Confidence            99999999999876644

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.58  E-value=3.1e-14  Score=88.15  Aligned_cols=90  Identities=26%  Similarity=0.313  Sum_probs=74.0

Q ss_pred             CcccceeEEEEEeeCC-----CceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           2 GFHQDQITIEIRHSTK-----ESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      ..|||++.++..+...     +..+.++++.....+         ....+++..+..++.+++.|+.++|+.+++|+|++
T Consensus        76 ~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk  155 (291)
T cd06639          76 PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVK  155 (291)
T ss_pred             cCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            3699999999887643     357788887543111         22457889999999999999999999999999999


Q ss_pred             CCCeEEeeCCCeEEEeeceecccc
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      |+|++++.++.++++|||++....
T Consensus       156 p~nili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         156 GNNILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             HHHEEEcCCCCEEEeecccchhcc
Confidence            999999999999999999877543

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.58  E-value=8e-15  Score=90.18  Aligned_cols=89  Identities=26%  Similarity=0.263  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.+...+..+...+.++|+.....+    ....+++..+..++.+++.|+.|+|+++++|+|++|+|++++.++.
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~  139 (277)
T cd06642          60 DSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGD  139 (277)
T ss_pred             CCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCC
Confidence            599999999999999999999998654322    3356788899999999999999999999999999999999999999


Q ss_pred             eEEEeeceecccc
Q psy7276          79 LKFFFYFFFSFFF   91 (101)
Q Consensus        79 ~~i~dfgl~~~~~   91 (101)
                      ++++|||++..+.
T Consensus       140 ~~l~dfg~~~~~~  152 (277)
T cd06642         140 VKLADFGVAGQLT  152 (277)
T ss_pred             EEEcccccccccc
Confidence            9999999887554

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.58  E-value=1.5e-14  Score=91.65  Aligned_cols=54  Identities=22%  Similarity=0.445  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      ++...+..++.+++.|+.|+|+++++|+|++|.|++++.++.++++|||++...
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence            566777889999999999999999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.57  E-value=2.3e-14  Score=88.11  Aligned_cols=88  Identities=18%  Similarity=0.187  Sum_probs=75.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------------------KYQRLSNDHICYFLYQILRGLKYIHSANVLH   63 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~   63 (101)
                      .|||++.++..+...+..+.++++.....+                   ....+++..+..++.+++.|+.++|+.+++|
T Consensus        66 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h  145 (280)
T cd05049          66 QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVH  145 (280)
T ss_pred             CCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeec
Confidence            589999999999999999999987532111                   1134678888999999999999999999999


Q ss_pred             ccCCCCCeEEeeCCCeEEEeeceeccc
Q psy7276          64 RDLKPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        64 ~~lk~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      +|++|+|++++.++.++++|||+++..
T Consensus       146 ~dlkp~nili~~~~~~kl~d~g~~~~~  172 (280)
T cd05049         146 RDLATRNCLVGYDLVVKIGDFGMSRDV  172 (280)
T ss_pred             cccccceEEEcCCCeEEECCcccceec
Confidence            999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.57  E-value=1.5e-14  Score=89.01  Aligned_cols=90  Identities=24%  Similarity=0.402  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+..++.++++......     ....+++..+..++.+++.++.++|+.+++|+|++|+|++++.++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~  136 (286)
T cd07832          57 QHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG  136 (286)
T ss_pred             CCCCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC
Confidence            499999999999999999999998732211     124588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       137 ~~~l~dfg~~~~~~~  151 (286)
T cd07832         137 VLKIADFGLARLFSE  151 (286)
T ss_pred             cEEEeeeeecccccC
Confidence            999999998876544

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.57  E-value=3.1e-14  Score=86.86  Aligned_cols=89  Identities=22%  Similarity=0.297  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|++++.++..+...+..+.++++.....+         ....+++..+..++.+++.|+.++|+.+++|+|++|+|+++
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~  139 (267)
T cd08224          60 DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI  139 (267)
T ss_pred             CCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE
Confidence            589999999999999999999988643211         12347888999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++++|||++..+.
T Consensus       140 ~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224         140 TATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             CCCCcEEEeccceeeecc
Confidence            999999999999887554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.57  E-value=3.7e-14  Score=87.80  Aligned_cols=88  Identities=13%  Similarity=0.120  Sum_probs=72.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c-----------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.++..+..+...+.++++.....+    .           ...........++.+++.|+.++|+++++|+|++
T Consensus        67 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dik  146 (288)
T cd05061          67 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA  146 (288)
T ss_pred             CCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCC
Confidence            589999999999988889999998532111    0           0123456677899999999999999999999999


Q ss_pred             CCCeEEeeCCCeEEEeeceeccc
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      |+|++++.++.++++|||+++..
T Consensus       147 p~nili~~~~~~~L~Dfg~~~~~  169 (288)
T cd05061         147 ARNCMVAHDFTVKIGDFGMTRDI  169 (288)
T ss_pred             hheEEEcCCCcEEECcCCccccc
Confidence            99999999999999999988754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG1094|consensus

Probab=99.57  E-value=3e-15  Score=99.08  Aligned_cols=97  Identities=19%  Similarity=0.189  Sum_probs=80.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc-------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY-------QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      ..||||+.++..+..++.++.++||.....++.       ....-+....+..|+++|+.|+.+.+++|+|+.+.|+|++
T Consensus       592 LkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~  671 (807)
T KOG1094|consen  592 LKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD  671 (807)
T ss_pred             cCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec
Confidence            369999999999999999999999855432221       1123345567999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCcccccc
Q psy7276          75 TTCDLKFFFYFFFSFFFHFTVHDV   98 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~~~~~~   98 (101)
                      .+.++||+|||+++-+-.++.|..
T Consensus       672 ~e~~iKiadfgmsR~lysg~yy~v  695 (807)
T KOG1094|consen  672 GEFTIKIADFGMSRNLYSGDYYRV  695 (807)
T ss_pred             CcccEEecCcccccccccCCceee
Confidence            999999999999997777666654

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.57  E-value=1.6e-14  Score=88.19  Aligned_cols=88  Identities=22%  Similarity=0.348  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.+...+...+.++.++++.....+     +...+++..+..++.+++.++.++|..+++|+|++|+|++++.++
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~  139 (265)
T cd06631          60 KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG  139 (265)
T ss_pred             CCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC
Confidence            589999999999999999999998643221     225678889999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++++|||++...
T Consensus       140 ~~~l~dfg~~~~~  152 (265)
T cd06631         140 IIKLIDFGCARRL  152 (265)
T ss_pred             eEEeccchhhHhh
Confidence            9999999987754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.57  E-value=2.6e-14  Score=87.05  Aligned_cols=89  Identities=21%  Similarity=0.274  Sum_probs=76.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.++..+.....++.++++.....+       ....+++..+..++.+++.|+.++|.++++|+|++|+|++++.
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~  138 (261)
T cd05034          59 RHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE  138 (261)
T ss_pred             CCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC
Confidence            599999999999988899999987543211       1135788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++..+.
T Consensus       139 ~~~~~l~d~g~~~~~~  154 (261)
T cd05034         139 NLVCKIADFGLARLIE  154 (261)
T ss_pred             CCCEEECccccceecc
Confidence            9999999999887654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.57  E-value=3.5e-14  Score=86.48  Aligned_cols=89  Identities=19%  Similarity=0.158  Sum_probs=73.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+. ....+.++++.....+     ....+++.....++.+++.++.++|..+++|+|++|+|++++.++
T Consensus        54 ~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~  132 (257)
T cd05060          54 DHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH  132 (257)
T ss_pred             CCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC
Confidence            5899999988765 4456788887543211     224588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||+++.+..
T Consensus       133 ~~kl~df~~~~~~~~  147 (257)
T cd05060         133 QAKISDFGMSRALGA  147 (257)
T ss_pred             cEEeccccccceeec
Confidence            999999998876543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.57  E-value=1.8e-14  Score=90.82  Aligned_cols=89  Identities=21%  Similarity=0.264  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.+...+...+.++.++++......    ....++++....++.|++.|+.++|+.+++|+|++++|++++.++.
T Consensus        78 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~  157 (335)
T PTZ00024         78 KHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI  157 (335)
T ss_pred             CCcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC
Confidence            589999999999999999999988654222    2245788999999999999999999999999999999999999999


Q ss_pred             eEEEeeceecccc
Q psy7276          79 LKFFFYFFFSFFF   91 (101)
Q Consensus        79 ~~i~dfgl~~~~~   91 (101)
                      ++++|||++....
T Consensus       158 ~kl~dfg~~~~~~  170 (335)
T PTZ00024        158 CKIADFGLARRYG  170 (335)
T ss_pred             EEECCccceeecc
Confidence            9999999887655

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.57  E-value=1.8e-14  Score=88.73  Aligned_cols=89  Identities=18%  Similarity=0.254  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...+..+.++++.....+     ..  ..+++..+..++.+++.|+.++|+.+++|+|++|+||+++.
T Consensus        51 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~  130 (277)
T cd05577          51 SSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD  130 (277)
T ss_pred             CCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC
Confidence            589999999999999999999998643211     11  25889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++....
T Consensus       131 ~~~~~l~dfg~~~~~~  146 (277)
T cd05577         131 HGNVRISDLGLAVELK  146 (277)
T ss_pred             CCCEEEccCcchhhhc
Confidence            9999999999887543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.57  E-value=7.8e-15  Score=86.55  Aligned_cols=57  Identities=19%  Similarity=0.192  Sum_probs=51.1

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHH-HHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          35 QRLSNDHICYFLYQILRGLKYI-HSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~-h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.+++..+..++.|++.++.++ |..+++|+|+||+|++++ ++.++++|||++.....
T Consensus       112 ~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~~  169 (190)
T cd05147         112 APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHDH  169 (190)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccCCC
Confidence            5688889999999999999999 799999999999999998 57899999999885544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.57  E-value=1.7e-14  Score=89.89  Aligned_cols=88  Identities=14%  Similarity=0.200  Sum_probs=70.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.... ...++++......      ....++++.+..++.+++.|+.|+|.++++|+|++|+|++++.+
T Consensus        67 ~h~niv~~~~~~~~~~-~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~  145 (303)
T cd05110          67 DHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP  145 (303)
T ss_pred             CCCCcccEEEEEcCCC-ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCC
Confidence            5999999998876543 4456665432111      12347888889999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||+++.+.
T Consensus       146 ~~~kL~Dfg~~~~~~  160 (303)
T cd05110         146 NHVKITDFGLARLLE  160 (303)
T ss_pred             CceEEcccccccccc
Confidence            999999999987654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.57  E-value=2.9e-14  Score=86.93  Aligned_cols=88  Identities=17%  Similarity=0.221  Sum_probs=70.5

Q ss_pred             cccceeEEEEEee-CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHS-TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~-~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+. .++..+.++++......      ......+.....++.+++.|+.|+|+.+++|+|++|+|++++.
T Consensus        54 ~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~  133 (262)
T cd05058          54 SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE  133 (262)
T ss_pred             CCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC
Confidence            6999999988654 45567778887533211      1133566777888999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||+++.+
T Consensus       134 ~~~~kl~dfg~~~~~  148 (262)
T cd05058         134 SFTVKVADFGLARDI  148 (262)
T ss_pred             CCcEEECCccccccc
Confidence            999999999988754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.57  E-value=4.2e-14  Score=87.63  Aligned_cols=88  Identities=35%  Similarity=0.455  Sum_probs=73.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      .|||++.+...+......+.++|+......    .  ...+++..+..++.+++.|+.++|.++++|+|++|+|++++. 
T Consensus        59 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~  138 (294)
T PLN00009         59 QHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR  138 (294)
T ss_pred             cCCCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECC
Confidence            589999999999999999999998643321    1  123567788889999999999999999999999999999985 


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||++...
T Consensus       139 ~~~~kl~dfg~~~~~  153 (294)
T PLN00009        139 TNALKLADFGLARAF  153 (294)
T ss_pred             CCEEEEccccccccc
Confidence            457999999988754

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.57  E-value=1.2e-14  Score=91.61  Aligned_cols=89  Identities=40%  Similarity=0.556  Sum_probs=71.0

Q ss_pred             cccceeEEEEEeeCC----CceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTK----ESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~----~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++......    ..++.++++......    ....+++..+..++.|++.|+.++|..+++|+|++|+||+++
T Consensus        60 ~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~  139 (332)
T cd07857          60 GHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN  139 (332)
T ss_pred             CCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc
Confidence            599999998754322    345566665432211    235688999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||+++...
T Consensus       140 ~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857         140 ADCELKICDFGLARGFS  156 (332)
T ss_pred             CCCCEEeCcCCCceecc
Confidence            99999999999987544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.57  E-value=3.2e-14  Score=87.19  Aligned_cols=88  Identities=31%  Similarity=0.394  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+...+.++|+.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++++|++++.++
T Consensus        66 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~  145 (272)
T cd06629          66 DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG  145 (272)
T ss_pred             CCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC
Confidence            589999999999999999999998643221     225688888899999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++++|||++...
T Consensus       146 ~~~l~d~~~~~~~  158 (272)
T cd06629         146 ICKISDFGISKKS  158 (272)
T ss_pred             eEEEeeccccccc
Confidence            9999999988754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.57  E-value=4.5e-14  Score=85.79  Aligned_cols=89  Identities=21%  Similarity=0.262  Sum_probs=73.5

Q ss_pred             cccceeEEEEEeeC-CCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST-KESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|+|++.+...+.. ...++.+++++.....       ....+++..+..++.+++.++.++|+.+++|+|++|+|++++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~  136 (257)
T cd08223          57 KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT  136 (257)
T ss_pred             CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe
Confidence            58999999887764 4456788887543211       123478899999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++++|||++..+.
T Consensus       137 ~~~~~~l~df~~~~~~~  153 (257)
T cd08223         137 RTNIIKVGDLGIARVLE  153 (257)
T ss_pred             cCCcEEEecccceEEec
Confidence            99999999999887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.57  E-value=4.2e-14  Score=86.49  Aligned_cols=89  Identities=15%  Similarity=0.136  Sum_probs=74.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      .|||++.++..+...+..+.++++.....+            ....+++..+..++.+++.|+.|+|+.+++|+|++|+|
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n  136 (269)
T cd05044          57 NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARN  136 (269)
T ss_pred             CCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChhe
Confidence            599999999999999999999987532111            11236778888999999999999999999999999999


Q ss_pred             eEEeeCC-----CeEEEeeceecccc
Q psy7276          71 LLLNTTC-----DLKFFFYFFFSFFF   91 (101)
Q Consensus        71 il~~~~~-----~~~i~dfgl~~~~~   91 (101)
                      ++++.++     .++++|||++....
T Consensus       137 il~~~~~~~~~~~~~l~dfg~~~~~~  162 (269)
T cd05044         137 CLVSEKGYDADRVVKIGDFGLARDIY  162 (269)
T ss_pred             EEEecCCCCCCcceEECCcccccccc
Confidence            9998877     89999999887543

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.57  E-value=5.4e-15  Score=89.85  Aligned_cols=89  Identities=24%  Similarity=0.354  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+..+..++.++++.....+     ..+.+++.....++.|++.|+.++|+.+++|+|++|+|++++.++
T Consensus        51 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~  130 (265)
T cd05579          51 QSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG  130 (265)
T ss_pred             CCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC
Confidence            489999998888888889999988643221     224688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++++|||++....
T Consensus       131 ~~~l~dfg~~~~~~  144 (265)
T cd05579         131 HLKLTDFGLSKVGL  144 (265)
T ss_pred             CEEEEecccchhcc
Confidence            99999999877543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.56  E-value=4.2e-14  Score=86.32  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=71.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+.. +..+.++++......       ....+++..+..++.+++.|+.++|+.+++|+|++++|++++.
T Consensus        59 ~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~  137 (260)
T cd05069          59 RHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD  137 (260)
T ss_pred             CCCCeeeEEEEEcC-CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC
Confidence            58999999877754 456788887543211       1124678888999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++....
T Consensus       138 ~~~~~l~dfg~~~~~~  153 (260)
T cd05069         138 NLVCKIADFGLARLIE  153 (260)
T ss_pred             CCeEEECCCccceEcc
Confidence            9999999999987553

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.56  E-value=1.2e-14  Score=88.80  Aligned_cols=90  Identities=26%  Similarity=0.369  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.++..+..++.++.++++.....+     +.+.+++..+..++.|++.|+.++|.++++|+|++|+|++++.++
T Consensus        61 ~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~  140 (268)
T cd06630          61 NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG  140 (268)
T ss_pred             CCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            699999999999999999999998653222     235678899999999999999999999999999999999998765


Q ss_pred             -CeEEEeeceeccccC
Q psy7276          78 -DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 -~~~i~dfgl~~~~~~   92 (101)
                       .++++|||.+..+..
T Consensus       141 ~~~~l~dfg~~~~~~~  156 (268)
T cd06630         141 QRLRIADFGAAARLAA  156 (268)
T ss_pred             CEEEEccccccccccc
Confidence             599999999876543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.56  E-value=3.1e-14  Score=86.57  Aligned_cols=87  Identities=17%  Similarity=0.177  Sum_probs=71.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...+ .+.++++......       ....+++.....++.+++.|+.++|+.+++|+|++|+|++++.
T Consensus        57 ~~~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~  135 (254)
T cd05083          57 HHKNLVRLLGVILHNG-LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE  135 (254)
T ss_pred             CCCCcCeEEEEEcCCC-cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence            5899999998886654 6788887543221       1134678888899999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||++...
T Consensus       136 ~~~~kl~Dfg~~~~~  150 (254)
T cd05083         136 DGVAKVSDFGLARVG  150 (254)
T ss_pred             CCcEEECCCccceec
Confidence            999999999987643

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.56  E-value=1.6e-14  Score=91.81  Aligned_cols=91  Identities=29%  Similarity=0.472  Sum_probs=74.4

Q ss_pred             CcccceeEEEEEeeCCC------ceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           2 GFHQDQITIEIRHSTKE------SLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      ..|||++.++..+....      ..+.++++........  ..+++..+..++.|++.|+.++|..+++|+|++|+|+++
T Consensus        72 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~  151 (353)
T cd07850          72 VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  151 (353)
T ss_pred             cCCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence            36899999998876443      4678888865432211  237888888999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++++|||+++....
T Consensus       152 ~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850         152 KSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             CCCCCEEEccCccceeCCC
Confidence            9999999999999876543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.56  E-value=3.5e-14  Score=87.41  Aligned_cols=90  Identities=23%  Similarity=0.256  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+..+...+.++++....    ......+++..+..++.+++.++.++|+.+++|+|++|.|++++.++.
T Consensus        60 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~  139 (277)
T cd06641          60 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE  139 (277)
T ss_pred             CCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCC
Confidence            5999999999999999999999986432    223356788999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      ++++|||++.....
T Consensus       140 ~~l~dfg~~~~~~~  153 (277)
T cd06641         140 VKLADFGVAGQLTD  153 (277)
T ss_pred             EEEeecccceeccc
Confidence            99999998765433

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.56  E-value=5.4e-14  Score=85.25  Aligned_cols=89  Identities=20%  Similarity=0.183  Sum_probs=75.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|+|++.++..+......+.++++......      ....+++..+..++.+++.++.++|+++++|+|++|+|++++.+
T Consensus        50 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~  129 (251)
T cd05041          50 DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGEN  129 (251)
T ss_pred             CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCC
Confidence            589999999999999999999987533211      12346788888899999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       130 ~~~~l~d~g~~~~~~  144 (251)
T cd05041         130 NVLKISDFGMSREEE  144 (251)
T ss_pred             CcEEEeecccccccc
Confidence            999999999887543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.56  E-value=2.2e-14  Score=89.55  Aligned_cols=90  Identities=28%  Similarity=0.386  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.+...+...  +.++.++++......     ....+++..+..++.|++.|+.++|+.+++|+|++|+|++++.
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~  143 (309)
T cd07845          64 RHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD  143 (309)
T ss_pred             CCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            589999998887644  567888888653211     1245889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++..+..
T Consensus       144 ~~~~kL~dfg~~~~~~~  160 (309)
T cd07845         144 KGCLKIADFGLARTYGL  160 (309)
T ss_pred             CCCEEECccceeeecCC
Confidence            99999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.56  E-value=1.7e-14  Score=89.66  Aligned_cols=88  Identities=25%  Similarity=0.359  Sum_probs=72.9

Q ss_pred             cccceeEEEEEeeCCC--------ceEEEeeccccccc---c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           3 FHQDQITIEIRHSTKE--------SLVSFREYSDSHRT---K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      .|||++.++..+...+        ..+.++++......   .  ...+++..+..++.|++.|+.++|+.+++|+|++|+
T Consensus        69 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~  148 (310)
T cd07865          69 KHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAA  148 (310)
T ss_pred             CCCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence            5999999988776544        34788887653221   1  135789999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceeccc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~   90 (101)
                      |++++.++.++++|||++..+
T Consensus       149 nil~~~~~~~kl~dfg~~~~~  169 (310)
T cd07865         149 NILITKDGILKLADFGLARAF  169 (310)
T ss_pred             HEEECCCCcEEECcCCCcccc
Confidence            999999999999999988754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.56  E-value=1.8e-14  Score=92.14  Aligned_cols=85  Identities=16%  Similarity=0.179  Sum_probs=62.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCCeEEeeCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDL-KPSNLLLNTTCDLKF   81 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l-k~~nil~~~~~~~~i   81 (101)
                      .|+|++..+..   .+..+++|+++....+...  .......++.+++.++.++|+.+++|+|+ ||+|++++.++.++|
T Consensus        79 ~h~~iv~~l~~---~~~~~LVmE~~~G~~L~~~--~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikL  153 (365)
T PRK09188         79 RGIGVVPQLLA---TGKDGLVRGWTEGVPLHLA--RPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAV  153 (365)
T ss_pred             cCCCCCcEEEE---cCCcEEEEEccCCCCHHHh--CccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEE
Confidence            47787743322   2456888888654322211  11112467889999999999999999999 999999998899999


Q ss_pred             EeeceeccccC
Q psy7276          82 FFYFFFSFFFH   92 (101)
Q Consensus        82 ~dfgl~~~~~~   92 (101)
                      +|||+++.+..
T Consensus       154 iDFGlA~~~~~  164 (365)
T PRK09188        154 IDFQLASVFRR  164 (365)
T ss_pred             EECccceeccc
Confidence            99999986544

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.56  E-value=2.1e-14  Score=84.62  Aligned_cols=59  Identities=15%  Similarity=0.103  Sum_probs=53.1

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      ..+++.....++.+++.++.++|. .|++|+|++|+|++++ ++.++++|||++....+..
T Consensus       112 ~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~~~  171 (190)
T cd05145         112 VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDHPN  171 (190)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecCCCC
Confidence            456778888999999999999999 9999999999999998 8899999999998776653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.56  E-value=8.1e-15  Score=90.32  Aligned_cols=89  Identities=27%  Similarity=0.443  Sum_probs=77.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+..++..+.++++......     ....+++.....++.+++.|+.|+|+.+++|+|++|+|++++.++
T Consensus        58 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~  137 (286)
T cd07846          58 RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG  137 (286)
T ss_pred             CCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            589999999999999999999998654322     123578999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++++|||++....
T Consensus       138 ~~~l~dfg~~~~~~  151 (286)
T cd07846         138 VVKLCDFGFARTLA  151 (286)
T ss_pred             cEEEEeeeeeeecc
Confidence            99999999887543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.56  E-value=1.6e-14  Score=89.31  Aligned_cols=90  Identities=16%  Similarity=0.260  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+..+..++.++++.....+     ....+++..+..++.|++.++.++|..+++|+|++|.|++++.++
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~  142 (288)
T cd05583          63 RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG  142 (288)
T ss_pred             CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            589999999989888889999988643211     224578888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||+++....
T Consensus       143 ~~~l~dfg~~~~~~~  157 (288)
T cd05583         143 HVVLTDFGLSKEFLA  157 (288)
T ss_pred             CEEEEECcccccccc
Confidence            999999998776443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.56  E-value=5e-14  Score=85.60  Aligned_cols=88  Identities=18%  Similarity=0.280  Sum_probs=75.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .||+++.++..+......+.++++.....+      ..+.++++.+..++.+++.++.++|+.+++|+|++|+|++++.+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~  136 (256)
T cd05112          57 SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGEN  136 (256)
T ss_pred             CCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCC
Confidence            589999999999988889999987543221      12457888889999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       137 ~~~~l~d~g~~~~~  150 (256)
T cd05112         137 QVVKVSDFGMTRFV  150 (256)
T ss_pred             CeEEECCCcceeec
Confidence            99999999987754

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.56  E-value=2.6e-14  Score=90.28  Aligned_cols=90  Identities=34%  Similarity=0.553  Sum_probs=74.4

Q ss_pred             CcccceeEEEEEeeC--CCceEEEeeccccccc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHST--KESLVSFREYSDSHRT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.|||++.++..+..  +..++.++++......   ..+.+.+.....++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        64 ~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~  143 (337)
T cd07852          64 GDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSD  143 (337)
T ss_pred             cCCCCccceeeeeccCCCceEEEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            479999999987754  3457888888654222   22357888888899999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++....
T Consensus       144 ~~~kl~d~g~~~~~~  158 (337)
T cd07852         144 CRVKLADFGLARSLS  158 (337)
T ss_pred             CcEEEeeccchhccc
Confidence            999999999887553

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.56  E-value=5.1e-14  Score=86.68  Aligned_cols=88  Identities=17%  Similarity=0.175  Sum_probs=73.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK------------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      .|+|++.++..+...+..+.++++.....+.            ...+++..+..++.+++.|+.|+|+++++|+|++|+|
T Consensus        67 ~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~n  146 (277)
T cd05036          67 NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARN  146 (277)
T ss_pred             CCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhe
Confidence            5899999999998888889999875422111            1247788899999999999999999999999999999


Q ss_pred             eEEeeCC---CeEEEeeceeccc
Q psy7276          71 LLLNTTC---DLKFFFYFFFSFF   90 (101)
Q Consensus        71 il~~~~~---~~~i~dfgl~~~~   90 (101)
                      |+++.++   .++++|||+++.+
T Consensus       147 il~~~~~~~~~~kl~dfg~~~~~  169 (277)
T cd05036         147 CLLTCKGPGRVAKIADFGMARDI  169 (277)
T ss_pred             EEEeccCCCcceEeccCcccccc
Confidence            9998754   5899999998765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.56  E-value=6.2e-15  Score=89.74  Aligned_cols=90  Identities=18%  Similarity=0.331  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+..++.++++.....+     ....+++..+..++.+++.|+.++|..+++|+|++|+|++++.++
T Consensus        58 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~  137 (258)
T cd05578          58 NHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG  137 (258)
T ss_pred             CCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC
Confidence            589999999999999999999998654322     224688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       138 ~~~l~d~~~~~~~~~  152 (258)
T cd05578         138 HVHITDFNIATKVTP  152 (258)
T ss_pred             CEEEeecccccccCC
Confidence            999999998776544

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.55  E-value=3.1e-14  Score=86.40  Aligned_cols=89  Identities=26%  Similarity=0.360  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.+...+.....++.++++......     ....+++.....++.+++.|+.++|+.+++|+|++|+|++++.++
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~  139 (258)
T cd06632          60 QHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG  139 (258)
T ss_pred             CCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            589999999999998999999998643211     224478888889999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       140 ~~kl~d~~~~~~~~  153 (258)
T cd06632         140 VVKLADFGMAKQVV  153 (258)
T ss_pred             CEEEccCccceecc
Confidence            99999999877543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.55  E-value=4.9e-14  Score=86.35  Aligned_cols=89  Identities=16%  Similarity=0.193  Sum_probs=72.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.. ...+.+++++.....    .  ...+++..+..++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        65 ~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~  143 (270)
T cd05056          65 DHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSP  143 (270)
T ss_pred             CCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecC
Confidence            58999999987765 445678887543211    1  2347888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++++|||+++....
T Consensus       144 ~~~~l~d~g~~~~~~~  159 (270)
T cd05056         144 DCVKLGDFGLSRYLED  159 (270)
T ss_pred             CCeEEccCceeeeccc
Confidence            9999999999876543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG1035|consensus

Probab=99.55  E-value=6.7e-15  Score=103.09  Aligned_cols=72  Identities=28%  Similarity=0.429  Sum_probs=60.6

Q ss_pred             CceEEEeeccccccccc----cCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          18 ESLVSFREYSDSHRTKY----QRL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        18 ~~l~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      -.+++-|++|.....+.    ..+  .....+++++++++|+.|+|+.|++|||+||.||+++.++.+||+|||++..
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchh
Confidence            45667788877654422    333  4678889999999999999999999999999999999999999999999886

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.55  E-value=4.4e-14  Score=86.50  Aligned_cols=88  Identities=26%  Similarity=0.365  Sum_probs=73.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c--ccCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K--YQRL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~--~~~~--~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|+|++.++..+..++..+.++++.....+    .  ...+  ++..+..++.|++.|+.++|..+++|+|++|+|++++
T Consensus        63 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~  142 (268)
T cd06624          63 KHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN  142 (268)
T ss_pred             CCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc
Confidence            699999999999999999999987543222    1  1234  6777888999999999999999999999999999997


Q ss_pred             e-CCCeEEEeeceeccc
Q psy7276          75 T-TCDLKFFFYFFFSFF   90 (101)
Q Consensus        75 ~-~~~~~i~dfgl~~~~   90 (101)
                      . .+.++++|||++..+
T Consensus       143 ~~~~~~~l~dfg~~~~~  159 (268)
T cd06624         143 TYSGVVKISDFGTSKRL  159 (268)
T ss_pred             CCCCeEEEecchhheec
Confidence            6 578999999987654

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=4e-14  Score=86.55  Aligned_cols=89  Identities=29%  Similarity=0.419  Sum_probs=74.2

Q ss_pred             CcccceeEEEEEeeCCC------ceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q psy7276           2 GFHQDQITIEIRHSTKE------SLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDL   66 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l   66 (101)
                      ..|+|++.++..+....      .++.++++......         ....+++..+..++.|++.|+.++|+.+++|+|+
T Consensus        60 ~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l  139 (275)
T cd06608          60 SNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDI  139 (275)
T ss_pred             cCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence            36999999999887644      37888888653211         1246788899999999999999999999999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      +|+|++++.++.++++|||++...
T Consensus       140 ~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608         140 KGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             CHHHEEEccCCeEEECCCccceec
Confidence            999999999999999999987654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.55  E-value=4.8e-14  Score=87.26  Aligned_cols=88  Identities=19%  Similarity=0.354  Sum_probs=76.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+..++..+.++++.....+    ....+++..+..++.+++.|+.++|+.+++|+|++|.|++++.++.
T Consensus        74 ~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~  153 (285)
T cd06648          74 QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGR  153 (285)
T ss_pred             CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCc
Confidence            589999999999998999999987543222    2256788889999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccc
Q psy7276          79 LKFFFYFFFSFF   90 (101)
Q Consensus        79 ~~i~dfgl~~~~   90 (101)
                      ++++|||++...
T Consensus       154 ~~l~d~g~~~~~  165 (285)
T cd06648         154 VKLSDFGFCAQV  165 (285)
T ss_pred             EEEcccccchhh
Confidence            999999987644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.55  E-value=6.4e-14  Score=86.24  Aligned_cols=89  Identities=24%  Similarity=0.351  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCc-----eEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTKES-----LVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+.....     ++.++++......      ....+++..+..++.+++.|+.++|+.+++|+|++++|+
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~ni  138 (287)
T cd07838          59 EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNI  138 (287)
T ss_pred             CCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhE
Confidence            49999999999987766     8888887543211      113578999999999999999999999999999999999


Q ss_pred             EEeeCCCeEEEeeceecccc
Q psy7276          72 LLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~   91 (101)
                      +++.++.++++|||++..+.
T Consensus       139 li~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838         139 LVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             EEccCCCEEEeccCcceecc
Confidence            99999999999999887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.55  E-value=5e-14  Score=86.60  Aligned_cols=89  Identities=21%  Similarity=0.267  Sum_probs=74.1

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.+...+..  +...+.++++......    .  ...+++..+..++.+++.|+.++|..+++|+|++|.|++++
T Consensus        64 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~  143 (284)
T cd05038          64 DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE  143 (284)
T ss_pred             CCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc
Confidence            58999999887766  5567888887643211    1  12478888999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++++|||++....
T Consensus       144 ~~~~~~l~dfg~~~~~~  160 (284)
T cd05038         144 SEDLVKISDFGLAKVLP  160 (284)
T ss_pred             CCCCEEEcccccccccc
Confidence            99999999999988665

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.55  E-value=3e-14  Score=90.37  Aligned_cols=89  Identities=34%  Similarity=0.545  Sum_probs=73.2

Q ss_pred             cccceeEEEEEeeCCCc------eEEEeeccccc---cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKES------LVSFREYSDSH---RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~------l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+.....      ++.++++....   ......+++..+..++.|++.|+.++|+.+++|+|++|+|+++
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill  151 (343)
T cd07880          72 KHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV  151 (343)
T ss_pred             CCCCccceeeeecCCccccccceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            58999999988876543      36677665322   1123568899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++++|||++....
T Consensus       152 ~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880         152 NEDCELKILDFGLARQTD  169 (343)
T ss_pred             cCCCCEEEeecccccccc
Confidence            999999999999887543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.55  E-value=6.7e-14  Score=85.59  Aligned_cols=88  Identities=22%  Similarity=0.262  Sum_probs=71.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+.. ...+.++++......    .   ...+++..+..++.+++.|+.++|+.+++|+|++|+|++++.
T Consensus        59 ~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~  137 (262)
T cd05071          59 RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE  137 (262)
T ss_pred             CCCCcceEEEEECC-CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC
Confidence            58999999877654 456788887543211    1   134678888999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++|+|||.+..+.
T Consensus       138 ~~~~~L~dfg~~~~~~  153 (262)
T cd05071         138 NLVCKVADFGLARLIE  153 (262)
T ss_pred             CCcEEeccCCceeecc
Confidence            9999999999887553

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.55  E-value=2.4e-14  Score=89.03  Aligned_cols=88  Identities=19%  Similarity=0.327  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|+|++.++..+..+...+.++++......    ....+++.....++.+++.++.++|+.+++|+|++|+|++++.++.
T Consensus        75 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~  154 (292)
T cd06657          75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR  154 (292)
T ss_pred             CCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC
Confidence            589999999999999999999998544222    2346788889999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccc
Q psy7276          79 LKFFFYFFFSFF   90 (101)
Q Consensus        79 ~~i~dfgl~~~~   90 (101)
                      ++++|||++...
T Consensus       155 ~~l~dfg~~~~~  166 (292)
T cd06657         155 VKLSDFGFCAQV  166 (292)
T ss_pred             EEEcccccceec
Confidence            999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=4.3e-14  Score=86.76  Aligned_cols=91  Identities=23%  Similarity=0.280  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|+|++.+...+.....++.++++.....    .....+++..+..++.|++.|+.++|+.+++|+|++|+|++++.++.
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~  136 (274)
T cd06609          57 RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGD  136 (274)
T ss_pred             CCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC
Confidence            49999999999998888999998754321    12246889999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      ++++|||+++.+...
T Consensus       137 ~~l~d~g~~~~~~~~  151 (274)
T cd06609         137 VKLADFGVSGQLTST  151 (274)
T ss_pred             EEEcccccceeeccc
Confidence            999999998766543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.55  E-value=1.3e-14  Score=89.61  Aligned_cols=88  Identities=20%  Similarity=0.336  Sum_probs=75.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc----cCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY----QRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+.++.++++......    ..    ..+++..+..++.+++.|+.|+|. .+++|+|++|+|+++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~  136 (286)
T cd06622          57 VSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV  136 (286)
T ss_pred             CCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE
Confidence            689999999999999999999998654222    11    268899999999999999999996 599999999999999


Q ss_pred             eeCCCeEEEeeceeccc
Q psy7276          74 NTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~   90 (101)
                      +.++.++++|||++..+
T Consensus       137 ~~~~~~~l~dfg~~~~~  153 (286)
T cd06622         137 NGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             CCCCCEEEeecCCcccc
Confidence            99999999999987654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.55  E-value=3e-14  Score=88.50  Aligned_cols=90  Identities=21%  Similarity=0.275  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.+...+......+.++++......    ....+++..+..++.+++.|+.++|+++++|+|++++|++++.++.
T Consensus        74 ~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~  153 (293)
T cd06647          74 KHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS  153 (293)
T ss_pred             CCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCC
Confidence            599999999999988889999987643222    2245778888899999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      ++|+|||++....+
T Consensus       154 ~kL~dfg~~~~~~~  167 (293)
T cd06647         154 VKLTDFGFCAQITP  167 (293)
T ss_pred             EEEccCcceecccc
Confidence            99999998765443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.55  E-value=2.7e-14  Score=88.64  Aligned_cols=89  Identities=31%  Similarity=0.472  Sum_probs=74.3

Q ss_pred             cccceeEEEEEeeCCC----------ceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRHSTKE----------SLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~----------~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.+...+....          .++.++++......     ....+++..+..++.+++.|+.++|+.+++|+|++
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~  143 (302)
T cd07864          64 NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIK  143 (302)
T ss_pred             CCCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            5899999988776544          67888887654211     12357899999999999999999999999999999


Q ss_pred             CCCeEEeeCCCeEEEeeceecccc
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      |+|++++.++.++|+|||++..+.
T Consensus       144 p~nili~~~~~~kl~dfg~~~~~~  167 (302)
T cd07864         144 CSNILLNNKGQIKLADFGLARLYN  167 (302)
T ss_pred             HHHEEECCCCcEEeCccccccccc
Confidence            999999999999999999887654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.54  E-value=6.7e-14  Score=85.05  Aligned_cols=90  Identities=20%  Similarity=0.289  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...+..+.++++......       ....+++..+..++.+++.|+.++|+++++|+|++++|++++.
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~  136 (256)
T cd08218          57 KHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK  136 (256)
T ss_pred             CCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence            589999999999999999999997643211       1124678888999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||++..+..
T Consensus       137 ~~~~~l~d~~~~~~~~~  153 (256)
T cd08218         137 DGTIKLGDFGIARVLNS  153 (256)
T ss_pred             CCCEEEeeccceeecCc
Confidence            99999999998875543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG4250|consensus

Probab=99.54  E-value=2.6e-14  Score=95.77  Aligned_cols=92  Identities=20%  Similarity=0.204  Sum_probs=72.2

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeeccccccc--------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSHRT--------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||||.++..-++..      --.++|++|....+        +...+++..+..++..++.|+.|+|.++|+|||+||
T Consensus        69 nh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP  148 (732)
T KOG4250|consen   69 NHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKP  148 (732)
T ss_pred             CchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCC
Confidence            4889998877666544      22367777654332        224689999999999999999999999999999999


Q ss_pred             CCeEEee--CCC--eEEEeeceeccccCcc
Q psy7276          69 SNLLLNT--TCD--LKFFFYFFFSFFFHFT   94 (101)
Q Consensus        69 ~nil~~~--~~~--~~i~dfgl~~~~~~~~   94 (101)
                      .||++..  +|.  -||+|||.|+....++
T Consensus       149 ~NIvl~~Gedgq~IyKLtDfG~Arel~d~s  178 (732)
T KOG4250|consen  149 GNIVLQIGEDGQSIYKLTDFGAARELDDNS  178 (732)
T ss_pred             CcEEEeecCCCceEEeeecccccccCCCCC
Confidence            9999744  343  7999999999877665

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.54  E-value=8.7e-14  Score=84.85  Aligned_cols=88  Identities=20%  Similarity=0.263  Sum_probs=72.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|++++.++..+. ....+.++++......       ....++++.+..++.+++.|+.++|+.+++|+|++|.|++++.
T Consensus        59 ~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~  137 (260)
T cd05070          59 RHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD  137 (260)
T ss_pred             CCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC
Confidence            5899999987765 4557788887543211       1234788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++..+.
T Consensus       138 ~~~~~l~dfg~~~~~~  153 (260)
T cd05070         138 GLVCKIADFGLARLIE  153 (260)
T ss_pred             CceEEeCCceeeeecc
Confidence            9999999999987554

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.54  E-value=5.8e-14  Score=87.79  Aligned_cols=90  Identities=24%  Similarity=0.247  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.+...+......+.++++......     ....+++..+..++.+++.|+.++|..+++|+|++|.|++++.++
T Consensus        73 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~  152 (308)
T cd06634          73 RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG  152 (308)
T ss_pred             CCCCcccEEEEEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC
Confidence            589999999999998899999998654221     224578888899999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++....+
T Consensus       153 ~~kl~dfg~~~~~~~  167 (308)
T cd06634         153 LVKLGDFGSASIMAP  167 (308)
T ss_pred             cEEECCcccceeecC
Confidence            999999998776544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=7.7e-14  Score=84.42  Aligned_cols=91  Identities=24%  Similarity=0.404  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+..+.++++.....+     ....+++.....++.+++.++.++|+.+++|+|++|+|++++.++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~  136 (254)
T cd06627          57 KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG  136 (254)
T ss_pred             CCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC
Confidence            589999999988888888999887643222     225688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++|||++......
T Consensus       137 ~~~l~d~~~~~~~~~~  152 (254)
T cd06627         137 VVKLADFGVATKLNDV  152 (254)
T ss_pred             CEEEeccccceecCCC
Confidence            9999999988765543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.54  E-value=6.8e-14  Score=85.64  Aligned_cols=88  Identities=24%  Similarity=0.334  Sum_probs=72.6

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+..  ...++.++++.....+     ..+.+++.....++.+++.|+.++|..+++|+|++|+|++++.
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~  141 (266)
T cd06651          62 QHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS  141 (266)
T ss_pred             CCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC
Confidence            58999999887764  3566778877543211     2245788888899999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||++...
T Consensus       142 ~~~~~l~dfg~~~~~  156 (266)
T cd06651         142 AGNVKLGDFGASKRL  156 (266)
T ss_pred             CCCEEEccCCCcccc
Confidence            999999999988754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.54  E-value=4.2e-14  Score=89.09  Aligned_cols=84  Identities=23%  Similarity=0.277  Sum_probs=72.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----cc---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TK---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+..++.++.++++.....    ..   ...+++..+..++.|++.|+.|+|+++++|+|+||+|++++.
T Consensus        57 ~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~  136 (328)
T cd08226          57 RHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG  136 (328)
T ss_pred             CCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC
Confidence            69999999999999999999888744311    11   134788888899999999999999999999999999999999


Q ss_pred             CCCeEEEeece
Q psy7276          76 TCDLKFFFYFF   86 (101)
Q Consensus        76 ~~~~~i~dfgl   86 (101)
                      ++.+++.||+.
T Consensus       137 ~~~~~~~~~~~  147 (328)
T cd08226         137 DGLVSLSGLSH  147 (328)
T ss_pred             CCcEEEechHH
Confidence            99999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.54  E-value=7.1e-14  Score=85.55  Aligned_cols=92  Identities=18%  Similarity=0.262  Sum_probs=77.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCe
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNL   71 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~ni   71 (101)
                      ..|||++.++..+..++..+.++++......         ....+++..+..++.+++.++.++|. .+++|+|+++.|+
T Consensus        66 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~ni  145 (269)
T cd08528          66 LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNI  145 (269)
T ss_pred             CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHE
Confidence            3699999999999999999999998543211         22457888899999999999999996 7899999999999


Q ss_pred             EEeeCCCeEEEeeceeccccCc
Q psy7276          72 LLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +++.++.++++|||++......
T Consensus       146 l~~~~~~~~l~dfg~~~~~~~~  167 (269)
T cd08528         146 MLGEDDKVTITDFGLAKQKQPE  167 (269)
T ss_pred             EECCCCcEEEecccceeecccc
Confidence            9999999999999998765443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG1095|consensus

Probab=99.54  E-value=2.3e-14  Score=99.91  Aligned_cols=92  Identities=18%  Similarity=0.248  Sum_probs=78.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----cc--------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TK--------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~--------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      .|||++.+++.+...+..++++|+.....    .+        ...++..+...++.+++.|+.||+++..+||||..+|
T Consensus       753 ~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRN  832 (1025)
T KOG1095|consen  753 DHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARN  832 (1025)
T ss_pred             CCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhh
Confidence            69999999999999999999999854322    21        1346788899999999999999999999999999999


Q ss_pred             eEEeeCCCeEEEeeceeccccCcc
Q psy7276          71 LLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        71 il~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      +|++....+||+|||+|+.+....
T Consensus       833 CLL~~~r~VKIaDFGlArDiy~~~  856 (1025)
T KOG1095|consen  833 CLLDERRVVKIADFGLARDIYDKD  856 (1025)
T ss_pred             eeecccCcEEEcccchhHhhhhch
Confidence            999999999999999999554443

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.54  E-value=5.5e-14  Score=86.46  Aligned_cols=91  Identities=29%  Similarity=0.422  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...  +..+.++++......    . ...+++..+..++.+++.|+.++|..+++|+|++|+|++++.
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~  135 (287)
T cd07840          56 RHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN  135 (287)
T ss_pred             cCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC
Confidence            489999999988877  788999988653211    1 136888999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++++|||++......
T Consensus       136 ~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840         136 DGVLKLADFGLARPYTKR  153 (287)
T ss_pred             CCCEEEccccceeeccCC
Confidence            999999999988766543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.54  E-value=5.1e-14  Score=86.07  Aligned_cols=88  Identities=23%  Similarity=0.300  Sum_probs=72.5

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...  ..++.++++.....+     ....+++.....++.+++.|+.++|+.+++|+|++|+|++++.
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~  141 (265)
T cd06652          62 LHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS  141 (265)
T ss_pred             CCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC
Confidence            589999999887653  456678887543211     2245788888899999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||++...
T Consensus       142 ~~~~~l~Dfg~~~~~  156 (265)
T cd06652         142 VGNVKLGDFGASKRL  156 (265)
T ss_pred             CCCEEECcCcccccc
Confidence            999999999988754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0983|consensus

Probab=99.54  E-value=9.7e-15  Score=89.54  Aligned_cols=89  Identities=18%  Similarity=0.225  Sum_probs=73.0

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccc---cc--cccccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSD---SH--RTKYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~~   77 (101)
                      .|.||..++.|..+.++.+-|+...   ..  ..-.++++|.-+-.+...+..|+.|+.. ++++|||+||+|||+++.|
T Consensus       150 cpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G  229 (391)
T KOG0983|consen  150 CPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG  229 (391)
T ss_pred             CCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC
Confidence            6899999999999999887776522   11  1223668888888888999999999975 5899999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      ++|++|||.+-.+..
T Consensus       230 niKlCDFGIsGrlvd  244 (391)
T KOG0983|consen  230 NIKLCDFGISGRLVD  244 (391)
T ss_pred             CEEeecccccceeec
Confidence            999999998765443

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.54  E-value=4.8e-14  Score=85.89  Aligned_cols=89  Identities=25%  Similarity=0.348  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.++........++.++++......     ....+++..+..++.+++.|+.++|+.+++|+|++++|++++.++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~  136 (264)
T cd06626          57 KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG  136 (264)
T ss_pred             CCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            689999999998888899999988543222     223477888889999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++++|||++....
T Consensus       137 ~~kl~d~g~~~~~~  150 (264)
T cd06626         137 VIKLGDFGCAVKLK  150 (264)
T ss_pred             CEEEcccccccccC
Confidence            99999999877654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.54  E-value=8e-14  Score=84.96  Aligned_cols=91  Identities=22%  Similarity=0.281  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|+|++.+...+......+.++++......     .   ...+++..+..++.+++.|+.++|+.+++|+|++|+|++++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~  136 (267)
T cd06610          57 NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG  136 (267)
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc
Confidence            689999999999999999999987643211     1   13578889999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++++|||++..+...
T Consensus       137 ~~~~~~l~df~~~~~~~~~  155 (267)
T cd06610         137 EDGSVKIADFGVSASLADG  155 (267)
T ss_pred             CCCCEEEcccchHHHhccC
Confidence            9999999999988765543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.54  E-value=1.1e-13  Score=86.82  Aligned_cols=88  Identities=25%  Similarity=0.271  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+......+.+++++.....     ....+++..+..++.+++.++.++|..+++|+|++|+|++++.++
T Consensus        79 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~  158 (313)
T cd06633          79 KHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG  158 (313)
T ss_pred             CCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC
Confidence            589999999999999999999998643211     224578888889999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++++|||++...
T Consensus       159 ~~kL~dfg~~~~~  171 (313)
T cd06633         159 QVKLADFGSASKS  171 (313)
T ss_pred             CEEEeecCCCccc
Confidence            9999999987643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.53  E-value=1.1e-14  Score=91.89  Aligned_cols=89  Identities=43%  Similarity=0.611  Sum_probs=72.9

Q ss_pred             cccceeEEEEEee----CCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHS----TKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~----~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.+...+.    ....++.++++......    ..+.+++..+..++.+++.|+.++|..+++|+|++|+|++++
T Consensus        62 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~  141 (334)
T cd07855          62 KHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN  141 (334)
T ss_pred             CCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc
Confidence            4899988876554    34567788887543221    234588999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||+++.+.
T Consensus       142 ~~~~~kl~dfg~~~~~~  158 (334)
T cd07855         142 EDCELRIGDFGMARGLS  158 (334)
T ss_pred             CCCcEEecccccceeec
Confidence            99999999999987654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.53  E-value=8.4e-14  Score=85.71  Aligned_cols=90  Identities=21%  Similarity=0.275  Sum_probs=72.1

Q ss_pred             cccceeEEEEEeeC-CCceEEEeecccccc----ccc---------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHST-KESLVSFREYSDSHR----TKY---------QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~----~~~---------~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||++.++..+.. +...+.++++.....    ...         ..+++..+..++.+++.|+.|+|+.+++|+|++|
T Consensus        66 ~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p  145 (280)
T cd05043          66 SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAA  145 (280)
T ss_pred             CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCH
Confidence            69999999887655 455566665532111    110         3478889999999999999999999999999999


Q ss_pred             CCeEEeeCCCeEEEeeceeccccC
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +|++++.++.++++|||+++.+.+
T Consensus       146 ~nil~~~~~~~kl~d~g~~~~~~~  169 (280)
T cd05043         146 RNCVIDEELQVKITDNALSRDLFP  169 (280)
T ss_pred             hhEEEcCCCcEEECCCCCcccccC
Confidence            999999999999999999986644

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0665|consensus

Probab=99.53  E-value=4.2e-15  Score=92.19  Aligned_cols=91  Identities=31%  Similarity=0.489  Sum_probs=71.6

Q ss_pred             cccceeEEEEEeeCCCc------eEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKES------LVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~------l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      +|+|++.+...|.-...      ++.++|+......+.  -.++-.....++.|++.|++++|+.+|+||||||+|+++.
T Consensus        73 ~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~  152 (369)
T KOG0665|consen   73 NHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN  152 (369)
T ss_pred             cccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec
Confidence            68999999988865544      344455433222211  2356677888999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.+||.|||+++.-..+
T Consensus       153 ~~~~lKi~dfg~ar~e~~~  171 (369)
T KOG0665|consen  153 SDCTLKILDFGLARTEDTD  171 (369)
T ss_pred             chhheeeccchhhcccCcc
Confidence            9999999999999866554

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.53  E-value=6.6e-14  Score=86.25  Aligned_cols=89  Identities=27%  Similarity=0.390  Sum_probs=72.7

Q ss_pred             CcccceeEEEEEeeC------CCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           2 GFHQDQITIEIRHST------KESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~------~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      ..|||++.+...+..      ...++.++++.....+       ....+++..+..++.|++.|+.|+|+.+++|+|+++
T Consensus        70 ~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~  149 (282)
T cd06636          70 SHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKG  149 (282)
T ss_pred             cCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            369999999888753      4567788888643211       123477888888999999999999999999999999


Q ss_pred             CCeEEeeCCCeEEEeeceeccc
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      +|++++.++.++|+|||++...
T Consensus       150 ~nili~~~~~~~l~dfg~~~~~  171 (282)
T cd06636         150 QNVLLTENAEVKLVDFGVSAQL  171 (282)
T ss_pred             HHEEECCCCCEEEeeCcchhhh
Confidence            9999999999999999987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG1151|consensus

Probab=99.53  E-value=6.1e-14  Score=91.02  Aligned_cols=92  Identities=22%  Similarity=0.320  Sum_probs=77.9

Q ss_pred             cccceeEEEEEee-CCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHS-TKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~-~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~--~i~~~~lk~~nil~~   74 (101)
                      .||.||+++..|. +..+++.+++|+....+     +...+++..+..+..|++.|+.|+...  .|+|-||||.|||+-
T Consensus       525 DHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv  604 (775)
T KOG1151|consen  525 DHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV  604 (775)
T ss_pred             CcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEe
Confidence            5999999998885 67889999999876433     235578999999999999999999875  699999999999985


Q ss_pred             eC---CCeEEEeeceeccccCcc
Q psy7276          75 TT---CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        75 ~~---~~~~i~dfgl~~~~~~~~   94 (101)
                      ..   |.+||+||||++.|..++
T Consensus       605 ~GtacGeIKITDFGLSKIMdddS  627 (775)
T KOG1151|consen  605 NGTACGEIKITDFGLSKIMDDDS  627 (775)
T ss_pred             cCcccceeEeeecchhhhccCCc
Confidence            43   679999999999887654

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.53  E-value=6.8e-14  Score=85.15  Aligned_cols=90  Identities=26%  Similarity=0.396  Sum_probs=78.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~   76 (101)
                      .|+|++.+...+...+.++.++++.....+     ....+++.....++.+++.++.++|+ .+++|+|++|+|++++.+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~  136 (264)
T cd06623          57 ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSK  136 (264)
T ss_pred             CCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCC
Confidence            489999999999999999999988653211     22568899999999999999999999 999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++++|||++.....
T Consensus       137 ~~~~l~df~~~~~~~~  152 (264)
T cd06623         137 GEVKIADFGISKVLEN  152 (264)
T ss_pred             CCEEEccCccceeccc
Confidence            9999999998876544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.53  E-value=3.2e-14  Score=88.33  Aligned_cols=88  Identities=19%  Similarity=0.230  Sum_probs=75.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.....++.++++......     ....+++.....++.+++.|+.|+|+ .+++|+|++|+|++++.+
T Consensus        72 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~  151 (296)
T cd06618          72 DCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS  151 (296)
T ss_pred             CCCchHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC
Confidence            589999999999999999999988543211     12457888888999999999999997 599999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||++..+
T Consensus       152 ~~~kL~dfg~~~~~  165 (296)
T cd06618         152 GNVKLCDFGISGRL  165 (296)
T ss_pred             CCEEECccccchhc
Confidence            99999999987654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=7.1e-14  Score=85.46  Aligned_cols=89  Identities=24%  Similarity=0.300  Sum_probs=73.4

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.++..+...  +.++.++++.....+     ..+.+++.....++.+++.|+.++|+++++|+|++|+|++++.
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~  141 (264)
T cd06653          62 RHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS  141 (264)
T ss_pred             CCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence            689999999887653  457778887543211     2245788889999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||+++...
T Consensus       142 ~~~~~l~dfg~~~~~~  157 (264)
T cd06653         142 AGNVKLGDFGASKRIQ  157 (264)
T ss_pred             CCCEEECccccccccc
Confidence            9999999999887543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.53  E-value=7.8e-14  Score=88.03  Aligned_cols=89  Identities=40%  Similarity=0.596  Sum_probs=74.1

Q ss_pred             cccceeEEEEEeeC-CCceEEEeecccccc---ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHST-KESLVSFREYSDSHR---TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.+...+.. ....+.++++.....   .....+++..+..++.+++.|+.++|+.+++|++++|.|++++.++.
T Consensus        67 ~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~  146 (328)
T cd07856          67 RHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCD  146 (328)
T ss_pred             CCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCC
Confidence            59999999998865 456778888754322   22346788888889999999999999999999999999999999999


Q ss_pred             eEEEeeceecccc
Q psy7276          79 LKFFFYFFFSFFF   91 (101)
Q Consensus        79 ~~i~dfgl~~~~~   91 (101)
                      ++++|||++....
T Consensus       147 ~~l~dfg~~~~~~  159 (328)
T cd07856         147 LKICDFGLARIQD  159 (328)
T ss_pred             EEeCccccccccC
Confidence            9999999887543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.53  E-value=2.4e-14  Score=90.41  Aligned_cols=89  Identities=54%  Similarity=0.700  Sum_probs=72.2

Q ss_pred             cccceeEEEEEeeC-----CCceEEEeeccccc---cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST-----KESLVSFREYSDSH---RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-----~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.+...+..     ...++.++++....   ......+++..+..++.|++.|+.++|+.+++|+|++|+|++++
T Consensus        61 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~  140 (336)
T cd07849          61 KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN  140 (336)
T ss_pred             CCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC
Confidence            48999988765443     23567777765432   22335688999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++++|||++....
T Consensus       141 ~~~~~kl~dfg~~~~~~  157 (336)
T cd07849         141 TNCDLKICDFGLARIAD  157 (336)
T ss_pred             CCCCEEECcccceeecc
Confidence            99999999999887653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0664|consensus

Probab=99.52  E-value=1.2e-14  Score=89.36  Aligned_cols=62  Identities=48%  Similarity=0.772  Sum_probs=56.8

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCcccc
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFTVH   96 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~~~   96 (101)
                      ..++...+..++.|++.|+.|+|+.+|+|||+||.|++++.++.+||+|||+++..+++...
T Consensus       151 Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~  212 (449)
T KOG0664|consen  151 QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL  212 (449)
T ss_pred             CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence            45788889999999999999999999999999999999999999999999999988776543

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.52  E-value=1.7e-13  Score=83.66  Aligned_cols=88  Identities=18%  Similarity=0.264  Sum_probs=72.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.+...+.. ...+.++++......       ....+++..+..++.+++.|+.++|..+++|+|++|+|++++.
T Consensus        59 ~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~  137 (260)
T cd05073          59 QHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA  137 (260)
T ss_pred             CCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC
Confidence            58999999888877 677888887543211       1234677788889999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||.+....
T Consensus       138 ~~~~~l~d~~~~~~~~  153 (260)
T cd05073         138 SLVCKIADFGLARVIE  153 (260)
T ss_pred             CCcEEECCCcceeecc
Confidence            9999999999887553

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.51  E-value=4.4e-14  Score=86.82  Aligned_cols=91  Identities=34%  Similarity=0.426  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|++++.+...+..+...+.++++......     ....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.++
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~  135 (283)
T cd05118          56 NHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG  135 (283)
T ss_pred             cCCCcchHHHhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC
Confidence            489999999888888899999988654222     124678899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++|||.+....+.
T Consensus       136 ~~~l~df~~~~~~~~~  151 (283)
T cd05118         136 VLKLADFGLARSFGSP  151 (283)
T ss_pred             cEEEeeeeeeEecCCC
Confidence            9999999988766554

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.51  E-value=3.4e-14  Score=89.80  Aligned_cols=90  Identities=49%  Similarity=0.668  Sum_probs=73.9

Q ss_pred             cccceeEEEEEeeCC-----CceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTK-----ESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+...     ..++.++++......    ..+.+++..+..++.|++.|+.++|+.+++|+|++|+|+++
T Consensus        62 ~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~  141 (337)
T cd07858          62 DHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL  141 (337)
T ss_pred             CCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE
Confidence            689999887766543     347788887643221    23568899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++|+|||++.....
T Consensus       142 ~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858         142 NANCDLKICDFGLARTTSE  160 (337)
T ss_pred             cCCCCEEECcCccccccCC
Confidence            9999999999999876543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.51  E-value=1.1e-13  Score=87.78  Aligned_cols=88  Identities=38%  Similarity=0.635  Sum_probs=70.1

Q ss_pred             cccceeEEEEEeeCC------CceEEEeeccccc---cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTK------ESLVSFREYSDSH---RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~------~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+...      ...+.+.++....   ......+++..+..++.|++.|+.++|+.+++|+|++|+|+++
T Consensus        74 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll  153 (345)
T cd07877          74 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV  153 (345)
T ss_pred             CCCcccceeeeeeecccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE
Confidence            689999998877543      2345555543221   2223468899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccc
Q psy7276          74 NTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~   90 (101)
                      +.++.++++|||++...
T Consensus       154 ~~~~~~kl~dfg~~~~~  170 (345)
T cd07877         154 NEDCELKILDFGLARHT  170 (345)
T ss_pred             cCCCCEEEecccccccc
Confidence            99999999999987754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PTZ00284 protein kinase; Provisional

Probab=99.51  E-value=1.3e-13  Score=90.73  Aligned_cols=86  Identities=19%  Similarity=0.231  Sum_probs=66.9

Q ss_pred             ccceeEEEEEeeCC-CceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeCC
Q psy7276           4 HQDQITIEIRHSTK-ESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         4 h~~~~~~~~~~~~~-~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~~   77 (101)
                      |.+++.+...+... +.+++++++.....    .+.+.+++..+..++.|++.|+.|+|. .+|+|+|+||+||+++.++
T Consensus       190 ~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~  269 (467)
T PTZ00284        190 RFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD  269 (467)
T ss_pred             CcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCC
Confidence            45677787777654 45677777643321    133568899999999999999999998 5999999999999998765


Q ss_pred             ----------------CeEEEeeceecc
Q psy7276          78 ----------------DLKFFFYFFFSF   89 (101)
Q Consensus        78 ----------------~~~i~dfgl~~~   89 (101)
                                      .+||+|||.+..
T Consensus       270 ~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        270 TVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             cccccccccccCCCCceEEECCCCcccc
Confidence                            499999997654

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.51  E-value=2e-13  Score=83.27  Aligned_cols=88  Identities=22%  Similarity=0.296  Sum_probs=72.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.+...+ ..+..+.++++......       ....+++..+..++.+++.|+.++|+.+++|+|++|+|++++.
T Consensus        59 ~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~  137 (260)
T cd05067          59 QHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE  137 (260)
T ss_pred             CCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC
Confidence            589999998776 44567888887533211       1235788888999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceecccc
Q psy7276          76 TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~   91 (101)
                      ++.++++|||++....
T Consensus       138 ~~~~~l~dfg~~~~~~  153 (260)
T cd05067         138 TLCCKIADFGLARLIE  153 (260)
T ss_pred             CCCEEEccCcceeecC
Confidence            9999999999887654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG1027|consensus

Probab=99.51  E-value=6.9e-14  Score=95.17  Aligned_cols=93  Identities=22%  Similarity=0.187  Sum_probs=74.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---cc--cC--CCH-HHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---KY--QR--LSN-DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~--~~--~~~-~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++..+........+++.+|.|.....   +.  ..  ... ......+.|+..|+.++|+.+|+|||+||.|||+.
T Consensus       561 ~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~  640 (903)
T KOG1027|consen  561 EHPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILIS  640 (903)
T ss_pred             CCCceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEE
Confidence            599999999999999999999998654322   11  11  111 34567789999999999999999999999999997


Q ss_pred             e---C--CCeEEEeeceeccccCccc
Q psy7276          75 T---T--CDLKFFFYFFFSFFFHFTV   95 (101)
Q Consensus        75 ~---~--~~~~i~dfgl~~~~~~~~~   95 (101)
                      .   +  ..++|+|||+++.+..+..
T Consensus       641 ~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  641 VPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             ccCCCcceeEEecccccccccCCCcc
Confidence            7   3  3599999999999887743

>KOG0196|consensus

Probab=99.50  E-value=2.8e-14  Score=96.84  Aligned_cols=92  Identities=21%  Similarity=0.251  Sum_probs=81.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .||||+++.+.-.....++++.||.....+      +.+.|..-+...+++.|+.|++|+.+.+.+||||...|||++.+
T Consensus       688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn  767 (996)
T KOG0196|consen  688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN  767 (996)
T ss_pred             CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc
Confidence            499999999999999999999998654322      33668888888999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCcc
Q psy7276          77 CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~   94 (101)
                      -.+|++||||++.++.++
T Consensus       768 LvCKVsDFGLSRvledd~  785 (996)
T KOG0196|consen  768 LVCKVSDFGLSRVLEDDP  785 (996)
T ss_pred             eEEEeccccceeecccCC
Confidence            999999999999887765

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.50  E-value=2.3e-14  Score=87.87  Aligned_cols=91  Identities=27%  Similarity=0.399  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+..++.++++.....+     ..+.+++.....++.+++.|+.++|..+++|+|++++|++++.++
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~  139 (280)
T cd05581          60 GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM  139 (280)
T ss_pred             cCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            389999998888888899999988633211     224689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++|||++......
T Consensus       140 ~~~l~df~~~~~~~~~  155 (280)
T cd05581         140 HIKITDFGTAKVLDPN  155 (280)
T ss_pred             CEEecCCccccccCCc
Confidence            9999999988765543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0587|consensus

Probab=99.50  E-value=2.3e-13  Score=93.12  Aligned_cols=92  Identities=27%  Similarity=0.379  Sum_probs=79.2

Q ss_pred             CcccceeEEEEEee-----CCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           2 GFHQDQITIEIRHS-----TKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         2 ~~h~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      +.|||++..+..|.     .++-|+++||+|.....       ...++.|.....+..+++.|+.++|.+.++|||+|-.
T Consensus        73 ~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~  152 (953)
T KOG0587|consen   73 SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQ  152 (953)
T ss_pred             cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCc
Confidence            57999999888774     56778999999865321       2357889999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceeccccCc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      |||+..++.+|++|||++......
T Consensus       153 NiLLT~e~~VKLvDFGvSaQldsT  176 (953)
T KOG0587|consen  153 NVLLTENAEVKLVDFGVSAQLDST  176 (953)
T ss_pred             eEEEeccCcEEEeeeeeeeeeecc
Confidence            999999999999999998876554

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.50  E-value=2.5e-13  Score=83.90  Aligned_cols=88  Identities=28%  Similarity=0.433  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc-c-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY-Q-RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~-~-~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|+|++.++..+......+.++++.....+    .. . .+++.....++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        73 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~  152 (286)
T cd06614          73 KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD  152 (286)
T ss_pred             CCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCC
Confidence            589999999999999999999998653222    11 2 68888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       153 ~~~~l~d~~~~~~~  166 (286)
T cd06614         153 GSVKLADFGFAAQL  166 (286)
T ss_pred             CCEEECccchhhhh
Confidence            99999999976644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.50  E-value=2.9e-13  Score=83.79  Aligned_cols=88  Identities=23%  Similarity=0.308  Sum_probs=72.9

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+..  .+.++.++++.....+         ....+++..+..++.+++.|+.|+|+.+++|+|++++|+
T Consensus        57 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~ni  136 (287)
T cd06621          57 KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNI  136 (287)
T ss_pred             CCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence            69999999987754  4467888887643211         224578888899999999999999999999999999999


Q ss_pred             EEeeCCCeEEEeeceeccc
Q psy7276          72 LLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~   90 (101)
                      +++.++.++++|||++...
T Consensus       137 l~~~~~~~~l~dfg~~~~~  155 (287)
T cd06621         137 LLTRKGQVKLCDFGVSGEL  155 (287)
T ss_pred             EEecCCeEEEeeccccccc
Confidence            9999999999999987643

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4257|consensus

Probab=99.50  E-value=5.8e-14  Score=93.92  Aligned_cols=96  Identities=17%  Similarity=0.194  Sum_probs=80.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .||+|+++++.+.... .+++||.+....+      +...++-.....|..|++.|+.|+++...+|||+..+|+|+...
T Consensus       449 dHphIikLIGv~~e~P-~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp  527 (974)
T KOG4257|consen  449 DHPHIIKLIGVCVEQP-MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSP  527 (974)
T ss_pred             CCcchhheeeeeeccc-eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCc
Confidence            5999999999988764 5678887543322      23457777888899999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCccccccc
Q psy7276          77 CDLKFFFYFFFSFFFHFTVHDVT   99 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~~~~~~   99 (101)
                      ..+|++|||+++.+.....|.-+
T Consensus       528 ~CVKLaDFGLSR~~ed~~yYkaS  550 (974)
T KOG4257|consen  528 QCVKLADFGLSRYLEDDAYYKAS  550 (974)
T ss_pred             ceeeecccchhhhccccchhhcc
Confidence            99999999999988877766544

>KOG0669|consensus

Probab=99.50  E-value=6.2e-15  Score=89.60  Aligned_cols=88  Identities=22%  Similarity=0.336  Sum_probs=70.0

Q ss_pred             cccceeEEEEEee--------CCCceEEEeeccccc---cccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           3 FHQDQITIEIRHS--------TKESLVSFREYSDSH---RTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         3 ~h~~~~~~~~~~~--------~~~~l~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      .|+|++.++..+-        ..+.++++++++...   .+..  .+++...+..++.++..|+.|+|+..++|||+|+.
T Consensus        74 kHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaa  153 (376)
T KOG0669|consen   74 KHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAA  153 (376)
T ss_pred             cchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHh
Confidence            4777776654442        124577887776543   2222  46889999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceeccc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~   90 (101)
                      |+|++.++.++++|||+++.+
T Consensus       154 NvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen  154 NVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             hEEEcCCceEEeeccccccce
Confidence            999999999999999998643

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.49  E-value=8.7e-14  Score=85.70  Aligned_cols=89  Identities=31%  Similarity=0.409  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.+...+..++..+.++++......    ..  ..+++..+..++.+++.|+.++|+.+++|+|++|+|++++.+
T Consensus        56 ~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~  135 (283)
T cd07835          56 NHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDRE  135 (283)
T ss_pred             CCCCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC
Confidence            589999999999998999999988543211    11  257899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++++|||++..+.
T Consensus       136 ~~~~l~df~~~~~~~  150 (283)
T cd07835         136 GALKLADFGLARAFG  150 (283)
T ss_pred             CcEEEeecccccccC
Confidence            999999999887543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.49  E-value=3.7e-14  Score=89.16  Aligned_cols=91  Identities=43%  Similarity=0.595  Sum_probs=75.5

Q ss_pred             cccceeEEEEEeeCCC-----ceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKE-----SLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+....     .++.++++......    ....+++..+..++.+++.|+.++|+.+++|+|++|.|+++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili  136 (330)
T cd07834          57 RHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV  136 (330)
T ss_pred             CCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            4889988887776664     67888887553221    22468899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccCc
Q psy7276          74 NTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +.++.++++|||++......
T Consensus       137 ~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834         137 NSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             cCCCCEEEcccCceEeeccc
Confidence            99999999999998866554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.49  E-value=8.9e-14  Score=88.13  Aligned_cols=88  Identities=35%  Similarity=0.564  Sum_probs=71.7

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.+...+....      ..+.++++.......  ...+++..+..++.+++.|+.++|+.+++|+|++|+|++++
T Consensus        72 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~  151 (342)
T cd07879          72 QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN  151 (342)
T ss_pred             CCCCccchhheecccccCCCCceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence            5899999988876543      346777764432221  23588889999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccc
Q psy7276          75 TTCDLKFFFYFFFSFF   90 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~   90 (101)
                      .++.++++|||+++..
T Consensus       152 ~~~~~kL~dfg~~~~~  167 (342)
T cd07879         152 EDCELKILDFGLARHA  167 (342)
T ss_pred             CCCCEEEeeCCCCcCC
Confidence            9999999999988754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.49  E-value=6.4e-14  Score=85.44  Aligned_cols=88  Identities=22%  Similarity=0.332  Sum_probs=76.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+.....++.++++.....+     . ...+++.....++.+++.|+.++|+ .+++|+|++|+|++++.
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~  136 (265)
T cd06605          57 NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS  136 (265)
T ss_pred             CCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC
Confidence            489999999999988999999988653211     1 1567888999999999999999999 99999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++++|||.+...
T Consensus       137 ~~~~~l~d~g~~~~~  151 (265)
T cd06605         137 RGQIKLCDFGVSGQL  151 (265)
T ss_pred             CCCEEEeecccchhh
Confidence            999999999987654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.49  E-value=5.6e-14  Score=86.50  Aligned_cols=89  Identities=27%  Similarity=0.352  Sum_probs=76.2

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      |||++.++..+..++..+.++++......    .  ...+++..+..++.+++.++.++|+++++|+|+++.|++++.++
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~  136 (283)
T cd07830          57 HPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE  136 (283)
T ss_pred             CCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence            89999999888888899999988643221    1  13578899999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       137 ~~~l~d~~~~~~~~~  151 (283)
T cd07830         137 VVKIADFGLAREIRS  151 (283)
T ss_pred             CEEEeecccceeccC
Confidence            999999998876544

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.49  E-value=2.1e-13  Score=95.58  Aligned_cols=89  Identities=26%  Similarity=0.319  Sum_probs=71.1

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHC-------Cceec
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSA-------NVLHR   64 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~-------~i~~~   64 (101)
                      .|||++.++..|..  ...++++++++....+         ..+.+++..+..++.|++.|+.|+|..       +|+|+
T Consensus        70 ~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHR  149 (1021)
T PTZ00266         70 KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR  149 (1021)
T ss_pred             CCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceec
Confidence            58999999988754  4568899998653211         124688999999999999999999984       49999


Q ss_pred             cCCCCCeEEeeC-----------------CCeEEEeeceecccc
Q psy7276          65 DLKPSNLLLNTT-----------------CDLKFFFYFFFSFFF   91 (101)
Q Consensus        65 ~lk~~nil~~~~-----------------~~~~i~dfgl~~~~~   91 (101)
                      ||||+|||++..                 ..++|+|||++..+.
T Consensus       150 DLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~  193 (1021)
T PTZ00266        150 DLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG  193 (1021)
T ss_pred             cCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence            999999999642                 348999999987653

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.49  E-value=7.5e-14  Score=86.85  Aligned_cols=89  Identities=22%  Similarity=0.389  Sum_probs=71.7

Q ss_pred             cccceeEEEEEeeC--------CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           3 FHQDQITIEIRHST--------KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      .|||++.++..+..        ...++.++++......     ....+++..+..++.+++.|+.++|..+++|+|++|+
T Consensus        65 ~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~  144 (311)
T cd07866          65 KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAA  144 (311)
T ss_pred             CCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence            58999988766543        2345777776543221     1246889999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceecccc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      |++++.++.++++|||++....
T Consensus       145 nil~~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866         145 NILIDNQGILKIADFGLARPYD  166 (311)
T ss_pred             HEEECCCCCEEECcCccchhcc
Confidence            9999999999999999887554

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0574|consensus

Probab=99.48  E-value=1.4e-14  Score=90.09  Aligned_cols=89  Identities=26%  Similarity=0.304  Sum_probs=79.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccc------cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSH------RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      +..|.+|++++.|..+.+++++|+||...      +.+...+.+..+..++...+.|++|+|...-+|||+|..|||++.
T Consensus        85 C~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT  164 (502)
T KOG0574|consen   85 CKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT  164 (502)
T ss_pred             cCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc
Confidence            45688999999999999999999998653      335578999999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      +|.+|+.|||++-.+
T Consensus       165 ~G~AKLADFGVAGQL  179 (502)
T KOG0574|consen  165 DGIAKLADFGVAGQL  179 (502)
T ss_pred             cchhhhhhccccchh
Confidence            999999999987654

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.48  E-value=4e-13  Score=80.92  Aligned_cols=91  Identities=24%  Similarity=0.401  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|++++.+...+......+.++++......     . ...+++..+..++.+++.++.++|..+++|+|++|+|++++.+
T Consensus        55 ~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~  134 (253)
T cd05122          55 KHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD  134 (253)
T ss_pred             CCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccC
Confidence            489999999999988888889887652221     1 1367889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||.+....+.
T Consensus       135 ~~~~l~d~~~~~~~~~~  151 (253)
T cd05122         135 GEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CeEEEeecccccccccc
Confidence            99999999988776554

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.48  E-value=2.9e-13  Score=82.31  Aligned_cols=91  Identities=25%  Similarity=0.329  Sum_probs=74.2

Q ss_pred             cccceeEEEEEee--CCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHH-----HCCceeccC
Q psy7276           3 FHQDQITIEIRHS--TKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIH-----SANVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~--~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h-----~~~i~~~~l   66 (101)
                      .|||++.+...+.  .+..++.++++.....+         ....+++..+..++.+++.|+.++|     ..+++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl  136 (265)
T cd08217          57 KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDL  136 (265)
T ss_pred             CCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCC
Confidence            5899999987665  34567788887543211         1246788899999999999999999     889999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +|+|++++.++.++++|||++......
T Consensus       137 ~p~nili~~~~~~kl~d~g~~~~~~~~  163 (265)
T cd08217         137 KPANIFLDANNNVKLGDFGLAKILGHD  163 (265)
T ss_pred             CHHHEEEecCCCEEEecccccccccCC
Confidence            999999999999999999988866543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.48  E-value=2.1e-13  Score=84.26  Aligned_cols=88  Identities=18%  Similarity=0.273  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.....++.++|+......     ..+.+++..+..++.+++.++.|+|. .+++|+|++|+|++++.+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~  140 (284)
T cd06620          61 RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSR  140 (284)
T ss_pred             CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCC
Confidence            589999999999999999999998654322     22457888999999999999999997 589999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++++|||++...
T Consensus       141 ~~~~l~d~gl~~~~  154 (284)
T cd06620         141 GQIKLCDFGVSGEL  154 (284)
T ss_pred             CcEEEccCCcccch
Confidence            99999999987644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1345|consensus

Probab=99.48  E-value=4e-14  Score=86.76  Aligned_cols=90  Identities=21%  Similarity=0.332  Sum_probs=68.7

Q ss_pred             CCcccceeEEE-EEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           1 MGFHQDQITIE-IRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         1 ~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      +|-|++|+.-+ ..|++-+....++|++....+    ....+.|.-...++.|+++|+.|||+.+++|||+|.+|||+-+
T Consensus        77 Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~  156 (378)
T KOG1345|consen   77 LSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD  156 (378)
T ss_pred             eccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec
Confidence            35677776643 445666666667777544333    2245778889999999999999999999999999999999854


Q ss_pred             C--CCeEEEeeceeccc
Q psy7276          76 T--CDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~--~~~~i~dfgl~~~~   90 (101)
                      .  -++|++|||+++..
T Consensus       157 ~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  157 ADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             CCccEEEeeeccccccc
Confidence            3  47999999997754

>KOG3653|consensus

Probab=99.48  E-value=7.8e-14  Score=90.21  Aligned_cols=94  Identities=17%  Similarity=0.164  Sum_probs=73.4

Q ss_pred             cccceeEEEEEeeCCC----ceEEEeecc----ccccccccCCCHHHHHHHHHHHHHHHHHHHHC---------Cceecc
Q psy7276           3 FHQDQITIEIRHSTKE----SLVSFREYS----DSHRTKYQRLSNDHICYFLYQILRGLKYIHSA---------NVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~----~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~---------~i~~~~   65 (101)
                      .|+||+.++..-..+.    .+.+++++-    +...+.....++...++++..++.|+.|+|..         .|.|||
T Consensus       262 ~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRD  341 (534)
T KOG3653|consen  262 KHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRD  341 (534)
T ss_pred             cchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccccc
Confidence            5778877766554443    455566552    22333445688999999999999999999964         489999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccCcccc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFHFTVH   96 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~~~~~   96 (101)
                      +|+.|+|+..++...|+|||||..+.++.+.
T Consensus       342 lkSkNVLvK~DlTccIaDFGLAl~~~p~~~~  372 (534)
T KOG3653|consen  342 LKSKNVLVKNDLTCCIADFGLALRLEPGKPQ  372 (534)
T ss_pred             ccccceEEccCCcEEeeccceeEEecCCCCC
Confidence            9999999999999999999999998876543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.48  E-value=4.5e-13  Score=79.90  Aligned_cols=84  Identities=14%  Similarity=0.015  Sum_probs=57.7

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCCeEEeeCCCeEEE
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDL-KPSNLLLNTTCDLKFF   82 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l-k~~nil~~~~~~~~i~   82 (101)
                      ++++..++..    ...+.++++.....+... ... ....++.+++.++.++|++|++|+|+ +|.||+++.++.++|+
T Consensus        61 ~~~vP~ll~~----~~~~lvmeyI~G~~L~~~-~~~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LI  134 (218)
T PRK12274         61 LPRTPRLLHW----DGRHLDRSYLAGAAMYQR-PPR-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVI  134 (218)
T ss_pred             CCCCCEEEEE----cCEEEEEeeecCccHHhh-hhh-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEE
Confidence            4555555543    223556665433222111 111 12356788999999999999999999 7999999999999999


Q ss_pred             eeceeccccCc
Q psy7276          83 FYFFFSFFFHF   93 (101)
Q Consensus        83 dfgl~~~~~~~   93 (101)
                      |||++....+.
T Consensus       135 DFG~A~~~~~~  145 (218)
T PRK12274        135 DFQLAVRGNPR  145 (218)
T ss_pred             ECCCceecCCc
Confidence            99999855543

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.48  E-value=1.3e-13  Score=83.34  Aligned_cols=90  Identities=26%  Similarity=0.382  Sum_probs=76.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+..+...+.++++.....+     ....+++.....++.+++.|+.++|+.+++|+|++|.|++++.++
T Consensus        51 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~  130 (250)
T cd05123          51 NHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG  130 (250)
T ss_pred             CCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC
Confidence            489999998888888889999987632211     223578999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       131 ~~~l~d~~~~~~~~~  145 (250)
T cd05123         131 HIKLTDFGLAKELSS  145 (250)
T ss_pred             cEEEeecCcceeccc
Confidence            999999998776544

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.48  E-value=4.4e-13  Score=82.12  Aligned_cols=89  Identities=18%  Similarity=0.231  Sum_probs=67.7

Q ss_pred             cccceeEEEEEeeCCC---c---eEEEeeccccccc-----------cccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHSTKE---S---LVSFREYSDSHRT-----------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~---~---l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|||++.++..+....   .   .+.++++......           ....++......++.+++.|+.|+|+.+++|+|
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~d  138 (273)
T cd05074          59 DHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRD  138 (273)
T ss_pred             CCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            5899999988765432   1   2344443221110           112467888899999999999999999999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++|+|++++.++.++++|||+++...
T Consensus       139 ikp~nili~~~~~~kl~dfg~~~~~~  164 (273)
T cd05074         139 LAARNCMLNENMTVCVADFGLSKKIY  164 (273)
T ss_pred             cchhhEEEcCCCCEEECccccccccc
Confidence            99999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.47  E-value=1.1e-13  Score=85.03  Aligned_cols=90  Identities=36%  Similarity=0.432  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|+|++.+...+...+..+.++++......    .. ..+++..+..++.+++.|+.++|.++++|+|++++|++++.++
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~  135 (282)
T cd07829          56 KHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG  135 (282)
T ss_pred             CCCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC
Confidence            489999999888888899999987654321    11 3588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++.....
T Consensus       136 ~~~l~d~g~~~~~~~  150 (282)
T cd07829         136 VLKLADFGLARAFGI  150 (282)
T ss_pred             CEEEecCCcccccCC
Confidence            999999998876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.47  E-value=4.1e-13  Score=81.27  Aligned_cols=90  Identities=27%  Similarity=0.365  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+...+..+.++++......     .    ...+++.....++.+++.|+.++|+.+++|+|++++|+++
T Consensus        57 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~  136 (258)
T cd08215          57 NHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL  136 (258)
T ss_pred             CCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE
Confidence            489999999999888888899987543211     1    2558889999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++++|||++.....
T Consensus       137 ~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215         137 TSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             cCCCcEEECCccceeeccc
Confidence            9999999999998775544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PRK10345 hypothetical protein; Provisional

Probab=99.47  E-value=2.3e-13  Score=81.40  Aligned_cols=84  Identities=17%  Similarity=0.098  Sum_probs=60.9

Q ss_pred             cccceeEEEEEeeCC---CceE-EEeeccc--cc----cccccCCCHHHHHHHHHHHHHHH-HHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTK---ESLV-SFREYSD--SH----RTKYQRLSNDHICYFLYQILRGL-KYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~---~~l~-~~~~~~~--~~----~~~~~~~~~~~~~~~~~~i~~~l-~~~h~~~i~~~~lk~~ni   71 (101)
                      .||||+.++..++++   +.++ .+++++.  ..    ....+.+++.  ..++.+++.++ +|+|+++|+|+|+||+||
T Consensus        59 ~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NI  136 (210)
T PRK10345         59 DWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNI  136 (210)
T ss_pred             CCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHE
Confidence            589999999999886   3444 5688732  21    1122345555  34677888777 899999999999999999


Q ss_pred             EEeeC----CCeEEEe-eceec
Q psy7276          72 LLNTT----CDLKFFF-YFFFS   88 (101)
Q Consensus        72 l~~~~----~~~~i~d-fgl~~   88 (101)
                      +++..    ..++|+| ||...
T Consensus       137 Ll~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345        137 LCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             EEeccCCCCCcEEEEECCCCcc
Confidence            99753    3699999 55444

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.47  E-value=5.6e-13  Score=80.60  Aligned_cols=91  Identities=25%  Similarity=0.363  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...  ...+.++++......     ....+++..+..++.+++.++.++|+.+++|+|++|+|++++.
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~  136 (260)
T cd06606          57 QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS  136 (260)
T ss_pred             CCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC
Confidence            489999999988887  788888887633211     2236889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||.+......
T Consensus       137 ~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606         137 DGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             CCCEEEcccccEEecccc
Confidence            999999999987766554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.46  E-value=1.1e-13  Score=93.01  Aligned_cols=53  Identities=28%  Similarity=0.365  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-CCCeEEEeeceecccc
Q psy7276          39 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        39 ~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-~~~~~i~dfgl~~~~~   91 (101)
                      +..+..++.|++.|+.|+|+++|+|||+||+|||++. ++.++|+|||+++.+.
T Consensus       254 ~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        254 NKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccc
Confidence            3445678999999999999999999999999999986 5789999999997553

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.45  E-value=7.3e-14  Score=88.54  Aligned_cols=89  Identities=39%  Similarity=0.602  Sum_probs=71.8

Q ss_pred             cccceeEEEEEeeCCCc------eEEEeecccccc---ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKES------LVSFREYSDSHR---TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~------l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+...+.      ++.++++.....   .....+++..+..++.+++.|+.++|+.+++|+|++|+|+++
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill  151 (343)
T cd07851          72 DHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV  151 (343)
T ss_pred             cCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence            57888777665554443      677777654322   223568999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++++|||++....
T Consensus       152 ~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851         152 NEDCELKILDFGLARHTD  169 (343)
T ss_pred             CCCCCEEEcccccccccc
Confidence            999999999999887654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.45  E-value=4.3e-13  Score=81.40  Aligned_cols=89  Identities=27%  Similarity=0.299  Sum_probs=74.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.+...+...+.++.++++......       ....+++..+..++.+++.++.++|+++++|+|++|+|++++.
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~  136 (256)
T cd08220          57 SHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK  136 (256)
T ss_pred             CCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            589999999999888899999988643211       1134788899999999999999999999999999999999986


Q ss_pred             CC-CeEEEeeceecccc
Q psy7276          76 TC-DLKFFFYFFFSFFF   91 (101)
Q Consensus        76 ~~-~~~i~dfgl~~~~~   91 (101)
                      ++ .++++|||++....
T Consensus       137 ~~~~~~l~d~~~~~~~~  153 (256)
T cd08220         137 HKMVVKIGDFGISKILS  153 (256)
T ss_pred             CCCEEEEccCCCceecC
Confidence            54 58999999887554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.44  E-value=3.1e-13  Score=81.92  Aligned_cols=90  Identities=26%  Similarity=0.296  Sum_probs=75.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|+|++.+...+......+.++++......         ....++++.+..++.+++.|+.++|+.+++|+|+++.|+++
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~  136 (256)
T cd08530          57 NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL  136 (256)
T ss_pred             CCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE
Confidence            589999999888888888888887432211         12457888899999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++++|||++.....
T Consensus       137 ~~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530         137 VANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             ecCCcEEEeeccchhhhcc
Confidence            9999999999998876544

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG4278|consensus

Probab=99.43  E-value=7.8e-14  Score=93.57  Aligned_cols=91  Identities=15%  Similarity=0.165  Sum_probs=74.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||+|.+...|.....+|++.|+.-+.    ++   +..-+.......++.||.+|++|+..+..|||||..+|+|+++
T Consensus       321 kHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgE  400 (1157)
T KOG4278|consen  321 KHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE  400 (1157)
T ss_pred             cCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccc
Confidence            5899998888888888888887764322    11   1123556667788899999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      +..+|+.||||++.|..+
T Consensus       401 nhiVKvADFGLsRlMtgD  418 (1157)
T KOG4278|consen  401 NHIVKVADFGLSRLMTGD  418 (1157)
T ss_pred             cceEEeeccchhhhhcCC
Confidence            999999999999988765

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.42  E-value=5.3e-13  Score=81.04  Aligned_cols=90  Identities=27%  Similarity=0.305  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|+|++.++..+...+..+.++++......       ....+++..+..++.+++.|+.++|..+++|+|++|.|++++.
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~  136 (257)
T cd08225          57 KHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK  136 (257)
T ss_pred             CCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC
Confidence            589999999999999999999998643211       1124688899999999999999999999999999999999988


Q ss_pred             CC-CeEEEeeceeccccC
Q psy7276          76 TC-DLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~-~~~i~dfgl~~~~~~   92 (101)
                      ++ .++++|||.+.....
T Consensus       137 ~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225         137 NGMVAKLGDFGIARQLND  154 (257)
T ss_pred             CCCeEEecccccchhccC
Confidence            75 469999998775543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.42  E-value=2.8e-13  Score=82.57  Aligned_cols=89  Identities=24%  Similarity=0.438  Sum_probs=73.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.+...+......+.++++......         ....+++.....++.+++.|+.++|+.+++|+|++++|+++
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili  139 (260)
T cd08222          60 DHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFL  139 (260)
T ss_pred             CCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEe
Confidence            589999988888888888888887543211         22457889999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +. +.++++|||++.....
T Consensus       140 ~~-~~~~l~d~g~~~~~~~  157 (260)
T cd08222         140 KN-NLLKIGDFGVSRLLMG  157 (260)
T ss_pred             ec-CCEeecccCceeecCC
Confidence            64 6699999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG1167|consensus

Probab=99.42  E-value=2.8e-13  Score=86.29  Aligned_cols=89  Identities=22%  Similarity=0.344  Sum_probs=76.1

Q ss_pred             CCcccceeEEEEEeeCCCceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-C
Q psy7276           1 MGFHQDQITIEIRHSTKESLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-C   77 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-~   77 (101)
                      +|++-|++.+..++..++....++++-.......  ..++-+....|+..++.|+.++|.+||+|||+||.|++.+.. +
T Consensus        91 ~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~  170 (418)
T KOG1167|consen   91 LGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQ  170 (418)
T ss_pred             hccchhhhcchhhhccCCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccC
Confidence            5788999999999999999999998854322211  346778889999999999999999999999999999999864 7


Q ss_pred             CeEEEeeceecc
Q psy7276          78 DLKFFFYFFFSF   89 (101)
Q Consensus        78 ~~~i~dfgl~~~   89 (101)
                      .-.++|||++..
T Consensus       171 rg~LvDFgLA~~  182 (418)
T KOG1167|consen  171 RGVLVDFGLAQR  182 (418)
T ss_pred             CceEEechhHHH
Confidence            899999999985

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.41  E-value=4.3e-13  Score=85.00  Aligned_cols=88  Identities=39%  Similarity=0.565  Sum_probs=69.5

Q ss_pred             cccceeEEEEEeeCC--------------CceEEEeeccccccc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHSTK--------------ESLVSFREYSDSHRT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--------------~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|||++.++..+...              ..++.++++......   ..+.+++..+..++.|++.|+.++|+.+++|+|
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~d  139 (342)
T cd07854          60 DHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRD  139 (342)
T ss_pred             CCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            588888877555433              346677777654221   234688999999999999999999999999999


Q ss_pred             CCCCCeEEee-CCCeEEEeeceeccc
Q psy7276          66 LKPSNLLLNT-TCDLKFFFYFFFSFF   90 (101)
Q Consensus        66 lk~~nil~~~-~~~~~i~dfgl~~~~   90 (101)
                      ++++|++++. ++.++++|||++...
T Consensus       140 ikp~Nili~~~~~~~kl~dfg~~~~~  165 (342)
T cd07854         140 LKPANVFINTEDLVLKIGDFGLARIV  165 (342)
T ss_pred             CCHHHEEEcCCCceEEECCcccceec
Confidence            9999999975 457899999988754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1165|consensus

Probab=99.40  E-value=8.4e-13  Score=82.91  Aligned_cols=92  Identities=13%  Similarity=0.199  Sum_probs=68.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---cc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---KY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +..+.|..++-....+-.-.+++|....+..   ..  .+|+.+++..++.|++..++++|.+.+++||+||+|+|+++.
T Consensus        81 ~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp  160 (449)
T KOG1165|consen   81 GGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRP  160 (449)
T ss_pred             cCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCC
Confidence            3445666666555555554555554322211   11  568999999999999999999999999999999999999875


Q ss_pred             C-----CeEEEeeceeccccCc
Q psy7276          77 C-----DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~-----~~~i~dfgl~~~~~~~   93 (101)
                      +     .+.++|||+++.+...
T Consensus       161 ~~k~~n~IhiiDFGmAK~YrDp  182 (449)
T KOG1165|consen  161 GTKDANVIHIIDFGMAKEYRDP  182 (449)
T ss_pred             CCCCCceEEEEeccchhhhcCc
Confidence            4     4999999999987543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.39  E-value=3e-13  Score=93.74  Aligned_cols=50  Identities=14%  Similarity=0.238  Sum_probs=41.7

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEee
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFY   84 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~df   84 (101)
                      ..+++..+..++.|++.|+.|+|+++|+|||+||+|||++..+.++++||
T Consensus        75 ~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~  124 (793)
T PLN00181         75 RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIES  124 (793)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeec
Confidence            45889999999999999999999999999999999999965443333333

>smart00090 RIO RIO-like kinase

Probab=99.39  E-value=3.1e-12  Score=77.83  Aligned_cols=58  Identities=14%  Similarity=0.105  Sum_probs=50.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~~~-i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      ......+..++.+++.++.++|..+ ++|+|++|+|++++ ++.++++|||.+....+..
T Consensus       144 ~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~  202 (237)
T smart00090      144 EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPM  202 (237)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCCcc
Confidence            3455567788999999999999999 99999999999999 8899999999988665543

>KOG0576|consensus

Probab=99.38  E-value=2.6e-13  Score=90.95  Aligned_cols=91  Identities=26%  Similarity=0.315  Sum_probs=82.0

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.||||+.++..|.....+++.||||....++.     +++++.+.....++.+.++.|+|..+-+|||+|-.|+++.+.
T Consensus        69 c~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~  148 (829)
T KOG0576|consen   69 CRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE  148 (829)
T ss_pred             CCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc
Confidence            579999999999999999999999987655543     678899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      |++++.|||.+-.+..
T Consensus       149 gDvklaDfgvsaqita  164 (829)
T KOG0576|consen  149 GDVKLADFGVSAQITA  164 (829)
T ss_pred             CceeecccCchhhhhh
Confidence            9999999998776544

>KOG1006|consensus

Probab=99.36  E-value=8.4e-14  Score=85.09  Aligned_cols=86  Identities=19%  Similarity=0.249  Sum_probs=70.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil   72 (101)
                      ..||||++++..-..|+.++-||..+.+..         +....+|.-+-.+......|+.|+.. ..++|||+||+|||
T Consensus       121 ~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNIL  200 (361)
T KOG1006|consen  121 NCPNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNIL  200 (361)
T ss_pred             CCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheE
Confidence            568999999988899999999887543321         22456777777778888899999975 58999999999999


Q ss_pred             EeeCCCeEEEeeceec
Q psy7276          73 LNTTCDLKFFFYFFFS   88 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~   88 (101)
                      +++.|.+|++|||.+-
T Consensus       201 ldr~G~vKLCDFGIcG  216 (361)
T KOG1006|consen  201 LDRHGDVKLCDFGICG  216 (361)
T ss_pred             EecCCCEeeecccchH
Confidence            9999999999999754

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.33  E-value=3.7e-12  Score=84.59  Aligned_cols=55  Identities=27%  Similarity=0.384  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +++..+..++.+++.++.++|..+++|+|+||+|++++.++.++++|||++..+.
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence            4566788899999999999999999999999999999999999999999987543

>KOG0199|consensus

Probab=99.33  E-value=1.6e-12  Score=88.00  Aligned_cols=91  Identities=22%  Similarity=0.269  Sum_probs=74.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----c---ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----R---TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .||+++.+++.-.+ ..+.+++|.+...    .   .....|.-...+.|+.|++.|+.|+..++++|||+..+|+++..
T Consensus       169 ~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas  247 (1039)
T KOG0199|consen  169 QHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS  247 (1039)
T ss_pred             cCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc
Confidence            69999999988776 4556666653221    1   12245777889999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCcc
Q psy7276          76 TCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~~   94 (101)
                      ...+||+||||.+-+..+.
T Consensus       248 prtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  248 PRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             cceeeeecccceeccCCCC
Confidence            9999999999998776653

>KOG0201|consensus

Probab=99.32  E-value=2.3e-13  Score=87.28  Aligned_cols=93  Identities=24%  Similarity=0.280  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQR-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .++|+..++..|..+..++.+|+++.....    +.+. +.+.....++.+++.|+.|+|..+.+|||+|..|+++..+|
T Consensus        69 ~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g  148 (467)
T KOG0201|consen   69 DSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG  148 (467)
T ss_pred             CcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC
Confidence            467788888888888888888888654322    2233 47777888999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCccc
Q psy7276          78 DLKFFFYFFFSFFFHFTV   95 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~~~   95 (101)
                      +++++|||++-.+.....
T Consensus       149 ~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen  149 DVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             cEEEEecceeeeeechhh
Confidence            999999999887765533

>KOG4158|consensus

Probab=99.30  E-value=9.3e-12  Score=80.07  Aligned_cols=54  Identities=28%  Similarity=0.245  Sum_probs=44.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee--CC--CeEEEeeceecc
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TC--DLKFFFYFFFSF   89 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~--~~--~~~i~dfgl~~~   89 (101)
                      ..+......++.|+++|+.++|++|+.|||+|++|||+.-  ++  .+.+.|||++.-
T Consensus       337 ~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA  394 (598)
T KOG4158|consen  337 HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA  394 (598)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence            3455566678899999999999999999999999999843  33  389999997653

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.27  E-value=3.2e-11  Score=85.08  Aligned_cols=83  Identities=14%  Similarity=0.243  Sum_probs=69.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h---~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+......+.++|+........  ..+++.....++.+++.|+.|+|   +.+++|+|+||+|++++.++
T Consensus       741 ~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~  820 (968)
T PLN00113        741 QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD  820 (968)
T ss_pred             CCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC
Confidence            69999999999999999999999875433221  34788888999999999999999   66999999999999999887


Q ss_pred             CeEEEeece
Q psy7276          78 DLKFFFYFF   86 (101)
Q Consensus        78 ~~~i~dfgl   86 (101)
                      ..++. ++.
T Consensus       821 ~~~~~-~~~  828 (968)
T PLN00113        821 EPHLR-LSL  828 (968)
T ss_pred             ceEEE-ecc
Confidence            76654 444

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.26  E-value=1.1e-11  Score=74.07  Aligned_cols=90  Identities=30%  Similarity=0.439  Sum_probs=74.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|++++.+...+......+.++++......     ....+++.....++.+++.++.++|+.+++|+|+++.|++++.++
T Consensus        45 ~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~  124 (244)
T smart00220       45 KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDG  124 (244)
T ss_pred             CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCC
Confidence            578888888888877788888877543111     112378888999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||.+.....
T Consensus       125 ~~~l~d~~~~~~~~~  139 (244)
T smart00220      125 HVKLADFGLARQLDP  139 (244)
T ss_pred             cEEEccccceeeecc
Confidence            999999998876654

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1164|consensus

Probab=99.25  E-value=3.1e-11  Score=76.32  Aligned_cols=83  Identities=19%  Similarity=0.203  Sum_probs=65.6

Q ss_pred             ceeEEEEEe-eCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC--
Q psy7276           6 DQITIEIRH-STKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT--   76 (101)
Q Consensus         6 ~~~~~~~~~-~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~--   76 (101)
                      .+..++... .....-+++|+....+..      ..+.++..++..++.|++.+++++|+.|++|||+||.|++++..  
T Consensus        81 ~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~  160 (322)
T KOG1164|consen   81 HFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSR  160 (322)
T ss_pred             CCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCC
Confidence            455666666 455566677765332211      23679999999999999999999999999999999999999865  


Q ss_pred             ---CCeEEEeeceec
Q psy7276          77 ---CDLKFFFYFFFS   88 (101)
Q Consensus        77 ---~~~~i~dfgl~~   88 (101)
                         ..+.+.|||+++
T Consensus       161 ~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  161 SEVRTLYLLDFGLAR  175 (322)
T ss_pred             cccceEEEEecCCCc
Confidence               359999999998

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.25  E-value=3.7e-11  Score=80.49  Aligned_cols=85  Identities=16%  Similarity=0.081  Sum_probs=62.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFF   82 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~   82 (101)
                      .|++++............+.++++.........   ......++.+++.++.++|+.+++|+|++|+|+++ .++.++++
T Consensus       394 ~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~---l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~li  469 (535)
T PRK09605        394 RRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDV---LEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLI  469 (535)
T ss_pred             cccCCCeeEEEEEeCCCCEEEEEecCCCcHHHH---HHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEE
Confidence            356665554455555566788887654222110   01345688899999999999999999999999999 67889999


Q ss_pred             eeceecccc
Q psy7276          83 FYFFFSFFF   91 (101)
Q Consensus        83 dfgl~~~~~   91 (101)
                      |||+++...
T Consensus       470 DFGla~~~~  478 (535)
T PRK09605        470 DFGLGKYSD  478 (535)
T ss_pred             eCcccccCC
Confidence            999988643

>KOG2052|consensus

Probab=99.25  E-value=2e-11  Score=78.90  Aligned_cols=93  Identities=18%  Similarity=0.146  Sum_probs=68.5

Q ss_pred             CCcccceeEEEEEeeC-CCc---eEEEeec----cccccccccCCCHHHHHHHHHHHHHHHHHHHHC--------Cceec
Q psy7276           1 MGFHQDQITIEIRHST-KES---LVSFREY----SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSA--------NVLHR   64 (101)
Q Consensus         1 ~~~h~~~~~~~~~~~~-~~~---l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~--------~i~~~   64 (101)
                      |-.|+||+.++..-.. +++   ++++.+|    ++...+....++-.....++..+++|+.++|..        .|.||
T Consensus       261 mLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR  340 (513)
T KOG2052|consen  261 MLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR  340 (513)
T ss_pred             HhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence            4578888776655443 233   2234443    122333445678888889999999999999964        48999


Q ss_pred             cCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          65 DLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        65 ~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      |+|+.||+++.++...|+|+|||.....+
T Consensus       341 DlKSKNILVKkn~~C~IADLGLAv~h~~~  369 (513)
T KOG2052|consen  341 DLKSKNILVKKNGTCCIADLGLAVRHDSD  369 (513)
T ss_pred             ccccccEEEccCCcEEEeeceeeEEeccc
Confidence            99999999999999999999998765443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.23  E-value=7.9e-11  Score=69.96  Aligned_cols=91  Identities=30%  Similarity=0.421  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQR-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|+|++.+...+......+.++++.....+     .... +++.....++.+++.++.++|..+++|+|+++.|++++.+
T Consensus        55 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~  134 (225)
T smart00221       55 KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMD  134 (225)
T ss_pred             CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            578899988888888888888887544211     1123 7888889999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++++|||.+......
T Consensus       135 ~~~~l~d~g~~~~~~~~  151 (225)
T smart00221      135 GLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCEEEeeCceeeEecCc
Confidence            99999999988766543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.22  E-value=2e-10  Score=67.13  Aligned_cols=90  Identities=31%  Similarity=0.479  Sum_probs=74.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      .|++++.+...+......+.++++......    ..  ..+++.....++.+++.++.++|..+++|+|+++.|++++. 
T Consensus        49 ~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~  128 (215)
T cd00180          49 NHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD  128 (215)
T ss_pred             CCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC
Confidence            468888888888888888888887552111    11  25788889999999999999999999999999999999998 


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||.+.....
T Consensus       129 ~~~~~l~d~~~~~~~~~  145 (215)
T cd00180         129 NGKVKLADFGLSKLLTS  145 (215)
T ss_pred             CCcEEEecCCceEEccC
Confidence            89999999998775544

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1163|consensus

Probab=99.22  E-value=3.4e-11  Score=73.10  Aligned_cols=59  Identities=24%  Similarity=0.447  Sum_probs=52.1

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC---CCeEEEeeceeccccCc
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~---~~~~i~dfgl~~~~~~~   93 (101)
                      ..|+..++...+-|++..++|+|.++.+|||+||+|+|++.+   +.+.++|||+|+.+-..
T Consensus       106 R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~  167 (341)
T KOG1163|consen  106 RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI  167 (341)
T ss_pred             hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence            458888999999999999999999999999999999998764   45999999999976543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.20  E-value=1.3e-10  Score=69.14  Aligned_cols=76  Identities=21%  Similarity=0.224  Sum_probs=55.2

Q ss_pred             eeCCCceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          14 HSTKESLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        14 ~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +......+.++++........  ..... ....++.+++.++.++|+.+++|+|++|.|++++ ++.++++|||++....
T Consensus        68 ~~~~~~~~lv~e~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         68 FVDPENFIIVMEYIEGEPLKDLINSNGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             EEeCCCCEEEEEEeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence            334455566777654322211  01112 5567888999999999999999999999999999 7889999999887543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.18  E-value=7.5e-11  Score=71.40  Aligned_cols=83  Identities=10%  Similarity=0.079  Sum_probs=58.8

Q ss_pred             cccceeEEEEEeeC--------CCceEEEeeccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHST--------KESLVSFREYSDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .||++..+...+..        .+..+++||+..+... +....++    ....+++.++..+|+.|++|+|++|.|+++
T Consensus        93 ~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili  168 (232)
T PRK10359         93 RSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV  168 (232)
T ss_pred             HHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE
Confidence            35666555544332        2456778887664322 1122222    245688999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccc
Q psy7276          74 NTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~   90 (101)
                      +.++ ++++|||.....
T Consensus       169 ~~~g-i~liDfg~~~~~  184 (232)
T PRK10359        169 SKNG-LRIIDLSGKRCT  184 (232)
T ss_pred             eCCC-EEEEECCCcccc
Confidence            9888 999999977654

>KOG1025|consensus

Probab=99.18  E-value=6.2e-12  Score=86.39  Aligned_cols=91  Identities=18%  Similarity=0.265  Sum_probs=72.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccc------cccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSD------SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++++...++... +.++.++..      .-+.....+..+....|..||+.|+.|+|.++++||||..+|+|+...
T Consensus       756 dHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP  834 (1177)
T KOG1025|consen  756 DHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP  834 (1177)
T ss_pred             CCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC
Confidence            5899999888777654 333333311      112233567888899999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCcc
Q psy7276          77 CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~   94 (101)
                      ..+||.|||+++...++.
T Consensus       835 ~hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  835 NHVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             CeEEEEecchhhccCccc
Confidence            999999999999877763

>KOG0590|consensus

Probab=99.18  E-value=1.3e-11  Score=83.42  Aligned_cols=85  Identities=29%  Similarity=0.332  Sum_probs=62.5

Q ss_pred             ccceeEEEEEeeCCCceEEEeecccc---ccccc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCe
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDS---HRTKY-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL   79 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~   79 (101)
                      |||++...............||++..   ..... +.+....+..++.|++.|++|+|..|+.|||+|++|+++..++.+
T Consensus       380 h~~~~e~l~~~~~~~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~l  459 (601)
T KOG0590|consen  380 HPNIIETLDIVQEIDGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGIL  459 (601)
T ss_pred             CCchhhhHHHHhhcccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCce
Confidence            45544333333333333333666544   22222 368888999999999999999999999999999999999999999


Q ss_pred             EEEeeceec
Q psy7276          80 KFFFYFFFS   88 (101)
Q Consensus        80 ~i~dfgl~~   88 (101)
                      ||+|||.+.
T Consensus       460 ki~Dfg~~~  468 (601)
T KOG0590|consen  460 KIIDFGAAS  468 (601)
T ss_pred             EEeecCcce
Confidence            999999755

>KOG2345|consensus

Probab=99.17  E-value=7.6e-11  Score=71.57  Aligned_cols=55  Identities=27%  Similarity=0.369  Sum_probs=50.9

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      ..++|.+...++.+++.|++++|...  ..|+|+||.||++.+.+.+++.|||-+..
T Consensus       122 ~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  122 NFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence            35899999999999999999999998  99999999999999999999999996553

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.17  E-value=1.7e-10  Score=68.35  Aligned_cols=53  Identities=17%  Similarity=0.144  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          40 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        40 ~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      .....++.+++.++.++|+.+++|+|++|.|++++.++.++++|||++.....
T Consensus       125 ~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         125 EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            34456778899999999999999999999999999999999999998865544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.13  E-value=2.8e-10  Score=67.24  Aligned_cols=47  Identities=23%  Similarity=0.272  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          44 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        44 ~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      .++.+++.++.++|+.+++|+|++|.|++++ ++.++++|||++....
T Consensus        94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence            6788999999999999999999999999999 8899999999887643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.11  E-value=1.5e-10  Score=70.61  Aligned_cols=46  Identities=22%  Similarity=0.182  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          46 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        46 ~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +.+++.++.++|+.|++|+|++|.||+++.++.++++|||.+....
T Consensus       148 ~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        148 WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence            5678899999999999999999999999988899999999888754

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.09  E-value=2.5e-10  Score=66.82  Aligned_cols=52  Identities=19%  Similarity=0.133  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          40 DHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        40 ~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      .....++.+++.++.++|. .+++|+|++|+|++++ ++.++++|||.+.....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence            5567788999999999999 9999999999999999 88999999999876554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0671|consensus

Probab=99.07  E-value=1.1e-09  Score=69.76  Aligned_cols=85  Identities=21%  Similarity=0.318  Sum_probs=62.0

Q ss_pred             eEEEEEeeCCCceEEEeecccc---ccc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee------
Q psy7276           8 ITIEIRHSTKESLVSFREYSDS---HRT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT------   75 (101)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~------   75 (101)
                      +.+...|.-.+..+++.|....   ...   +..+|+-..+..++.|++.++.++|+.+++|-||||+|||+-.      
T Consensus       154 v~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~  233 (415)
T KOG0671|consen  154 VQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKT  233 (415)
T ss_pred             EeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEE
Confidence            3344445556777666665331   112   2246888999999999999999999999999999999999732      


Q ss_pred             --------------CCCeEEEeeceeccccC
Q psy7276          76 --------------TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 --------------~~~~~i~dfgl~~~~~~   92 (101)
                                    +..++++|||-+.+-..
T Consensus       234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e  264 (415)
T KOG0671|consen  234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHE  264 (415)
T ss_pred             eccCCccceeccCCCcceEEEecCCcceecc
Confidence                          12379999998775433

>KOG0670|consensus

Probab=99.06  E-value=9.7e-11  Score=77.43  Aligned_cols=85  Identities=24%  Similarity=0.216  Sum_probs=63.3

Q ss_pred             EEEEEeeCCCceEEEeecccc-------ccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC-CeE
Q psy7276           9 TIEIRHSTKESLVSFREYSDS-------HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-DLK   80 (101)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~-~~~   80 (101)
                      .++..|.....|+++.|....       ..-..-.+.-..+..|+.|+..|+..+..++++|.|+||+|||+.... .+|
T Consensus       498 rl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLK  577 (752)
T KOG0670|consen  498 RLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILK  577 (752)
T ss_pred             HHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceee
Confidence            344445556677777765221       111223466777888999999999999999999999999999998864 689


Q ss_pred             EEeeceeccccCc
Q psy7276          81 FFFYFFFSFFFHF   93 (101)
Q Consensus        81 i~dfgl~~~~~~~   93 (101)
                      |||||-|.+..-+
T Consensus       578 LCDfGSA~~~~en  590 (752)
T KOG0670|consen  578 LCDFGSASFASEN  590 (752)
T ss_pred             eccCccccccccc
Confidence            9999987765443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.02  E-value=2.8e-09  Score=65.55  Aligned_cols=87  Identities=29%  Similarity=0.417  Sum_probs=70.4

Q ss_pred             ceeEEEEEeeCCCceEEEeeccccccc----ccc----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           6 DQITIEIRHSTKESLVSFREYSDSHRT----KYQ----RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         6 ~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      +++.+...+...+..+.++++......    ...    .+.+.....+..+++.++.++|..+++|+|++|+|++++..+
T Consensus        59 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~  138 (384)
T COG0515          59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG  138 (384)
T ss_pred             ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC
Confidence            688888888777766777776543222    111    578889999999999999999999999999999999999988


Q ss_pred             -CeEEEeeceeccccC
Q psy7276          78 -DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 -~~~i~dfgl~~~~~~   92 (101)
                       .++++|||.++....
T Consensus       139 ~~~~l~dfg~~~~~~~  154 (384)
T COG0515         139 RVVKLIDFGLAKLLPD  154 (384)
T ss_pred             CeEEEeccCcceecCC
Confidence             799999998874443

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.00  E-value=6.6e-09  Score=58.10  Aligned_cols=84  Identities=14%  Similarity=0.105  Sum_probs=62.4

Q ss_pred             ceeEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCCeEEeeCCCeEEE
Q psy7276           6 DQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKFF   82 (101)
Q Consensus         6 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~---~i~~~~lk~~nil~~~~~~~~i~   82 (101)
                      .+..++......+..+.++++........  ++......+..+++.++..+|..   +++|+|+++.|++++..+.++++
T Consensus        54 ~~p~~~~~~~~~~~~~~v~e~~~g~~~~~--~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~  131 (155)
T cd05120          54 PVPKVLASGESDGWSYLLMEWIEGETLDE--VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGII  131 (155)
T ss_pred             CCCeEEEEcCCCCccEEEEEecCCeeccc--CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEE
Confidence            45556665555566777887654322211  24456667788899999999985   69999999999999988899999


Q ss_pred             eeceecccc
Q psy7276          83 FYFFFSFFF   91 (101)
Q Consensus        83 dfgl~~~~~   91 (101)
                      ||+.+....
T Consensus       132 Df~~~~~~~  140 (155)
T cd05120         132 DWEYAGYGP  140 (155)
T ss_pred             ecccccCCC
Confidence            999887543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0603|consensus

Probab=98.89  E-value=1.1e-09  Score=73.27  Aligned_cols=91  Identities=14%  Similarity=0.145  Sum_probs=77.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccc-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHR-----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||.++.+...+++.+.++.++++.....     .+...+.+.....+..+.+-+++++|+.+++++|+|++|++++.+
T Consensus        54 ~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~  133 (612)
T KOG0603|consen   54 HNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE  133 (612)
T ss_pred             cCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc
Confidence            358999999999999999999988754422     233457788888899999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      |.+++.|||+++....
T Consensus       134 Ghi~~tdfglske~v~  149 (612)
T KOG0603|consen  134 GHIKLTDFGLSKEAVK  149 (612)
T ss_pred             CccccCCchhhhHhHh
Confidence            9999999999886543

>KOG1166|consensus

Probab=98.89  E-value=4e-09  Score=74.24  Aligned_cols=78  Identities=19%  Similarity=0.248  Sum_probs=59.0

Q ss_pred             eEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-------CCeE
Q psy7276           8 ITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLK   80 (101)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-------~~~~   80 (101)
                      -.++..|..-|++..+..       ..+.+++..++.+..|++.-++.+|..+|||.|+||+|+++...       --++
T Consensus       769 S~lv~ey~~~Gtlld~~N-------~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~  841 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLIN-------TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLY  841 (974)
T ss_pred             ceeeeeccccccHHHhhc-------cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceE
Confidence            344455555555443332       33557899999999999999999999999999999999998553       2389


Q ss_pred             EEeeceeccccC
Q psy7276          81 FFFYFFFSFFFH   92 (101)
Q Consensus        81 i~dfgl~~~~~~   92 (101)
                      |+|||.|..|..
T Consensus       842 lIDfG~siDm~l  853 (974)
T KOG1166|consen  842 LIDFGRSIDMKL  853 (974)
T ss_pred             EEecccceeeeE
Confidence            999998776543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.86  E-value=1.1e-08  Score=60.69  Aligned_cols=56  Identities=23%  Similarity=0.246  Sum_probs=46.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHH-HHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          37 LSNDHICYFLYQILRGLKYI-HSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~-h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ++++....+..+++.++..+ |..+++|.|+++.||++. ++.+.++|||.+....+.
T Consensus       121 ~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp  177 (197)
T cd05146         121 LNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence            44555666778999999988 899999999999999996 578999999987766543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1024|consensus

Probab=98.82  E-value=1.9e-08  Score=65.01  Aligned_cols=95  Identities=12%  Similarity=0.090  Sum_probs=70.6

Q ss_pred             ccceeEEEEEeeCCCceEEEeec-----ccccccc-----c----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREY-----SDSHRTK-----Y----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~-----~----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      |||+..+.....+....-.++-.     .++..+.     .    ......+.+.++.|+++|+.++|..+++|.|+..+
T Consensus       346 H~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaR  425 (563)
T KOG1024|consen  346 HPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAAR  425 (563)
T ss_pred             CCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhh
Confidence            89998887766554433333221     1111111     1    23455677788999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceeccccCcccccc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFFFHFTVHDV   98 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~~~~~~~~~   98 (101)
                      |.++++.-.+|++|=.+++.+.|.+.+..
T Consensus       426 NCvIdd~LqVkltDsaLSRDLFP~DYhcL  454 (563)
T KOG1024|consen  426 NCVIDDQLQVKLTDSALSRDLFPGDYHCL  454 (563)
T ss_pred             cceehhheeEEeccchhccccCccccccc
Confidence            99999999999999999999888766543

>KOG1290|consensus

Probab=98.70  E-value=5e-08  Score=64.30  Aligned_cols=72  Identities=25%  Similarity=0.389  Sum_probs=55.7

Q ss_pred             cceeEEEEEee----CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEE
Q psy7276           5 QDQITIEIRHS----TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLL   73 (101)
Q Consensus         5 ~~~~~~~~~~~----~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~   73 (101)
                      ..+|.++..|.    ++..+++++|...-+.+      ....++-..+..+..|++.|+.|||+ +||+|-|+||+|+|+
T Consensus       142 ~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  142 KCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             ceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence            34677777774    55677888876433222      33568889999999999999999996 699999999999998


Q ss_pred             eeC
Q psy7276          74 NTT   76 (101)
Q Consensus        74 ~~~   76 (101)
                      -.+
T Consensus       222 ~~~  224 (590)
T KOG1290|consen  222 CST  224 (590)
T ss_pred             ecc
Confidence            554

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.60  E-value=2e-07  Score=53.88  Aligned_cols=50  Identities=28%  Similarity=0.278  Sum_probs=44.7

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ..+++..+..++.|++.|+.|+|+.+      ||+|++++.++.+++  ||++.....
T Consensus        12 ~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~   61 (176)
T smart00750       12 RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP   61 (176)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc
Confidence            45899999999999999999999998      999999999999998  998876543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.56  E-value=2.3e-07  Score=61.22  Aligned_cols=49  Identities=14%  Similarity=0.170  Sum_probs=39.8

Q ss_pred             HHHHHHH-HHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          45 FLYQILR-GLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        45 ~~~~i~~-~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ++..++. .+..+|..|++|+|++|.|+++..++.++++|||++..+.+.
T Consensus       261 ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~  310 (437)
T TIGR01982       261 LAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEE  310 (437)
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCHH
Confidence            3333333 356778999999999999999999999999999998877654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.54  E-value=4.4e-07  Score=53.44  Aligned_cols=45  Identities=27%  Similarity=0.382  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          44 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        44 ~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      .++..+-.-+.-||..|++|.|+.+.|+.+..++ +.++||||+..
T Consensus        96 ~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          96 DLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            4556666667889999999999999999997655 99999999873

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.50  E-value=5.5e-07  Score=51.77  Aligned_cols=45  Identities=31%  Similarity=0.396  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHHHHCCc-----eeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          44 YFLYQILRGLKYIHSANV-----LHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        44 ~~~~~i~~~l~~~h~~~i-----~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      ..+.++..++..+|..++     +|+|+++.|++++ ++.++++||+.+..
T Consensus        87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            356788889999999875     9999999999998 67899999998774

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3087|consensus

Probab=98.48  E-value=1.7e-06  Score=51.17  Aligned_cols=47  Identities=21%  Similarity=0.296  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC---eEEEeeceec
Q psy7276          42 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKFFFYFFFS   88 (101)
Q Consensus        42 ~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~---~~i~dfgl~~   88 (101)
                      ...++..+-..+.-||.++++|.||..+|+++..++.   +.++|||++.
T Consensus       115 ~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~  164 (229)
T KOG3087|consen  115 LAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS  164 (229)
T ss_pred             HHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence            3567778888899999999999999999999977653   5899999976

>KOG1240|consensus

Probab=98.44  E-value=2.2e-08  Score=71.27  Aligned_cols=48  Identities=25%  Similarity=0.357  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          41 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        41 ~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .-.-++.|++.|+..||..||+|.|+|.+|||+..-+++.++||.-.+
T Consensus       121 EKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen  121 EKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFK  168 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccC
Confidence            334578899999999999999999999999999999999999998544

>KOG1243|consensus

Probab=98.43  E-value=4.5e-07  Score=61.72  Aligned_cols=86  Identities=19%  Similarity=0.297  Sum_probs=70.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCCeEEeeCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKF   81 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h-~~~i~~~~lk~~nil~~~~~~~~i   81 (101)
                      .||||+.++..++..+.+|++.|....-...-..+....++..+.|++.|+.|+| +++++|.++....++++..|..+|
T Consensus        67 RHP~Il~yL~t~e~~~~~ylvTErV~Pl~~~lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkL  146 (690)
T KOG1243|consen   67 RHPNILSYLDTTEEEGTLYLVTERVRPLETVLKELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKL  146 (690)
T ss_pred             cCchhhhhhhhhcccCceEEEeeccccHHHHHHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEE
Confidence            6999999999999999999999875432211122345666777899999999997 678999999999999999999999


Q ss_pred             Eeeceec
Q psy7276          82 FFYFFFS   88 (101)
Q Consensus        82 ~dfgl~~   88 (101)
                      .+|-++.
T Consensus       147 ggle~v~  153 (690)
T KOG1243|consen  147 GGLELVS  153 (690)
T ss_pred             eeeEEEe
Confidence            9998654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.39  E-value=1.3e-06  Score=52.22  Aligned_cols=55  Identities=24%  Similarity=0.286  Sum_probs=47.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC---CeEEEeeceecccc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC---DLKFFFYFFFSFFF   91 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~---~~~i~dfgl~~~~~   91 (101)
                      .+......++.++...+.-||..|++|.|+++.|||+..++   .+.++||+-++...
T Consensus       115 ~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  115 LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            44556677888999999999999999999999999999887   79999999777544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.36  E-value=1.8e-06  Score=53.70  Aligned_cols=53  Identities=15%  Similarity=0.146  Sum_probs=45.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-------CCCeEEEeeceecc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-------TCDLKFFFYFFFSF   89 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-------~~~~~i~dfgl~~~   89 (101)
                      .++.....++.++...+..+|..|++|.|+++.||+++.       +..+.++||+.+..
T Consensus       135 ~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        135 PDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            445566678889999999999999999999999999975       35799999998754

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.33  E-value=3.9e-07  Score=61.42  Aligned_cols=37  Identities=11%  Similarity=0.152  Sum_probs=32.4

Q ss_pred             HHCCceeccCCCCCeEEeeCC----CeEEEeeceeccccCc
Q psy7276          57 HSANVLHRDLKPSNLLLNTTC----DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        57 h~~~i~~~~lk~~nil~~~~~----~~~i~dfgl~~~~~~~   93 (101)
                      ...|++|+|++|.|++++.++    .++++|||+...+.+.
T Consensus       277 f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        277 FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            358999999999999999887    8999999998876554

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.30  E-value=2.2e-06  Score=50.69  Aligned_cols=52  Identities=21%  Similarity=0.228  Sum_probs=37.6

Q ss_pred             HHHHHHHHHHHHHHHH-HHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          40 DHICYFLYQILRGLKY-IHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        40 ~~~~~~~~~i~~~l~~-~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      .....++.+++..+.. +|..|++|.|+.+.||+++.+ .+.++|||.+....+
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~~  158 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSSH  158 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEETTS
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceecCC
Confidence            3455566666665554 579999999999999999877 999999998775543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.29  E-value=1.7e-06  Score=54.18  Aligned_cols=45  Identities=24%  Similarity=0.345  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          45 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        45 ~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      +-.|+...+.++|..|++|.|++++|++++.+|.+.++||+-...
T Consensus       150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r  194 (288)
T PF14531_consen  150 LTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVR  194 (288)
T ss_dssp             HHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEE
T ss_pred             HHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHee
Confidence            347888999999999999999999999999999999999985443

>KOG1023|consensus

Probab=98.15  E-value=7.8e-06  Score=54.51  Aligned_cols=88  Identities=23%  Similarity=0.279  Sum_probs=71.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccc------cCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKY------QRLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~h~~~i-~~~~lk~~nil~~~   75 (101)
                      .|.|+..++.....+..+..+.+++....+..      ..+++-....+...++.|+.|+|...+ .|..+++.|.+++.
T Consensus         5 ~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~   84 (484)
T KOG1023|consen    5 DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDS   84 (484)
T ss_pred             chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeee
Confidence            58899999999988888888888875433311      235555566678899999999998766 89999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ...+|+.|||+....
T Consensus        85 ~w~lklt~~Gl~~~~   99 (484)
T KOG1023|consen   85 RWVLKLTDFGLNSLL   99 (484)
T ss_pred             eEEEEechhhhcccc
Confidence            999999999987755

>KOG0590|consensus

Probab=98.14  E-value=4.1e-07  Score=62.11  Aligned_cols=90  Identities=28%  Similarity=0.349  Sum_probs=74.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccc------c-CCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKY------Q-RLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~i~~~l~~~h-~~~i~~~~lk~~nil~~   74 (101)
                      .|+|++.++.....+...++.+++........      . ..+...+..++.|...++.|+| ..++.|+|++|+|.+++
T Consensus        79 ~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~  158 (601)
T KOG0590|consen   79 KHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD  158 (601)
T ss_pred             ccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc
Confidence            38899999888888888888888744322211      1 3566778889999999999999 99999999999999999


Q ss_pred             eCC-CeEEEeeceeccccC
Q psy7276          75 TTC-DLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~-~~~i~dfgl~~~~~~   92 (101)
                      ..+ .+++.|||+|..+..
T Consensus       159 ~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  159 ESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cCCCcccCCCchhhccccc
Confidence            999 999999999887665

>KOG0606|consensus

Probab=97.95  E-value=4.9e-06  Score=59.47  Aligned_cols=41  Identities=32%  Similarity=0.568  Sum_probs=38.1

Q ss_pred             HHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          49 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        49 i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      ++-+++|+|.-+|+|+|+|++|.++..-|.+|+.|||+++.
T Consensus       152 mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~  192 (1205)
T KOG0606|consen  152 MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKK  192 (1205)
T ss_pred             hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhh
Confidence            36789999999999999999999999999999999999874

>KOG0601|consensus

Probab=97.89  E-value=9.9e-06  Score=54.36  Aligned_cols=92  Identities=21%  Similarity=0.233  Sum_probs=74.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc-----cCCCHHHHHHHHHHHHH----HHHHHHHCCceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILR----GLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~----~l~~~h~~~i~~~~lk~~nil   72 (101)
                      ..|+|.+.....++..+.+++-.|.+....+..     ..++...+...+.....    |+.++|...++|.++++.|++
T Consensus       175 ~~~~~~v~~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~  254 (524)
T KOG0601|consen  175 DSHENPVRDSPAWEGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIF  254 (524)
T ss_pred             CccccccccCcccccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhhee
Confidence            458889998889999999999888876544322     22556666667777777    999999999999999999999


Q ss_pred             EeeC-CCeEEEeeceeccccCc
Q psy7276          73 LNTT-CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        73 ~~~~-~~~~i~dfgl~~~~~~~   93 (101)
                      +..+ ...+++|||+...+..+
T Consensus       255 ~~~~~~s~~~~df~~v~~i~~~  276 (524)
T KOG0601|consen  255 TTSDWTSCKLTDFGLVSKISDG  276 (524)
T ss_pred             cccccceeecCCcceeEEccCC
Confidence            9988 78999999987766554

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.85  E-value=0.00025  Score=43.11  Aligned_cols=64  Identities=17%  Similarity=0.254  Sum_probs=43.8

Q ss_pred             eEEEeeccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          20 LVSFREYSDSHRTKY-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        20 l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ..+++|+.++..... ..+++    .....+..++.-+|..|+.|.|..|.|+++.. +.++++|++..+
T Consensus       118 ~~ll~EYIeG~~l~d~~~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~~i~iID~~~k~  182 (229)
T PF06176_consen  118 YVLLMEYIEGVELNDIEDIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-NGIRIIDTQGKR  182 (229)
T ss_pred             EEEEEEEecCeecccchhcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-CcEEEEECcccc
Confidence            345666655533211 12222    23345667789999999999999999998874 559999998654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.73  E-value=0.0002  Score=44.89  Aligned_cols=69  Identities=19%  Similarity=0.169  Sum_probs=47.9

Q ss_pred             EEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccc
Q psy7276          22 SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~   90 (101)
                      .+|++.....+..-++....+..++..++.-+.-....|++|.|+.+=||+++.+|.+.++||--+...
T Consensus       184 VvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         184 VVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPI  252 (304)
T ss_pred             eeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCcccccC
Confidence            455554433332222334445555666666666667899999999999999999999999999865543

>PRK09902 hypothetical protein; Provisional

Probab=97.67  E-value=0.0002  Score=43.29  Aligned_cols=52  Identities=17%  Similarity=0.075  Sum_probs=44.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC--eEEEeeceec
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKFFFYFFFS   88 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~--~~i~dfgl~~   88 (101)
                      .++..-..+..++...+.-+|+.|+.|.|+-+.||+++.++.  ++++||--++
T Consensus       125 ~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        125 YSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            345555678889999999999999999999999999987667  9999997655

>KOG3741|consensus

Probab=97.67  E-value=0.00031  Score=47.61  Aligned_cols=92  Identities=15%  Similarity=0.180  Sum_probs=67.9

Q ss_pred             cccceeEEEEEeeC----CCceEEEeeccccc---------------------cccccCCCHHHHHHHHHHHHHHHHHHH
Q psy7276           3 FHQDQITIEIRHST----KESLVSFREYSDSH---------------------RTKYQRLSNDHICYFLYQILRGLKYIH   57 (101)
Q Consensus         3 ~h~~~~~~~~~~~~----~~~l~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~i~~~l~~~h   57 (101)
                      .|+|+|++...+.+    ..++..+.+|-...                     ..+..+.+|...+.|+.|+..|+.++|
T Consensus       331 ~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH  410 (655)
T KOG3741|consen  331 CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH  410 (655)
T ss_pred             ccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            58999999888873    23444555551110                     001124568899999999999999999


Q ss_pred             HCCceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          58 SANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        58 ~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      +.|+..+-+.+.+|++..+.+++|..-|......+++
T Consensus       411 ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~  447 (655)
T KOG3741|consen  411 SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP  447 (655)
T ss_pred             hcCceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence            9999999999999999888889988877655554443

>KOG1033|consensus

Probab=97.45  E-value=3.3e-05  Score=51.56  Aligned_cols=55  Identities=25%  Similarity=0.274  Sum_probs=46.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      -+......++.|+..|++|   ++.+|+|++|.||+...+..++|.|||+...+....
T Consensus       356 ~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~  410 (516)
T KOG1033|consen  356 RSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDE  410 (516)
T ss_pred             cchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCC
Confidence            3455667788899999988   899999999999999999999999999877655443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.34  E-value=0.0036  Score=37.21  Aligned_cols=30  Identities=13%  Similarity=0.258  Sum_probs=25.6

Q ss_pred             CCceeccCCCCCeEEee--CCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNT--TCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~--~~~~~i~dfgl~~   88 (101)
                      ..++|.|+.+.|++++.  ++.+.++||+.+.
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            35799999999999988  5668999998766

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.27  E-value=0.00085  Score=41.59  Aligned_cols=53  Identities=13%  Similarity=0.071  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          41 HICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        41 ~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      .+..+..+++..+.-|.. .+++|.||..=|+|+. ++.+.|+|+|-|....+..
T Consensus       167 e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~  220 (268)
T COG1718         167 EAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN  220 (268)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECccccccCCCc
Confidence            566677778888887776 8999999999999999 8999999999877665543

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=97.27  E-value=0.0024  Score=41.97  Aligned_cols=50  Identities=14%  Similarity=0.291  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          39 NDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        39 ~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      .+++..++.+...-+.-+.. ...-||++...||+++ +|+++++||.+++.
T Consensus       320 ~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         320 SEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            44555555554443333333 3568999999999999 99999999999884

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.09  E-value=0.0026  Score=43.30  Aligned_cols=37  Identities=14%  Similarity=0.185  Sum_probs=32.8

Q ss_pred             HHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          57 HSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        57 h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      -..|.+|.|.+|.|+++..++.+.+.|||+...+.+.
T Consensus       282 ~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         282 LRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             HhcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence            3579999999999999999999999999987776654

>KOG0195|consensus

Probab=96.87  E-value=0.00098  Score=42.11  Aligned_cols=79  Identities=14%  Similarity=0.250  Sum_probs=58.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc---cCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY---QRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~nil~   73 (101)
                      -|||++.+...+..+..+..+..+.....+    .+   --.+..++++++..++.|+.|+|+..  +....+.+..+++
T Consensus       245 shpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi  324 (448)
T KOG0195|consen  245 SHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI  324 (448)
T ss_pred             cCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe
Confidence            489999999999998888877666433222    21   22467788899999999999999864  4455677888899


Q ss_pred             eeCCCeEE
Q psy7276          74 NTTCDLKF   81 (101)
Q Consensus        74 ~~~~~~~i   81 (101)
                      +++...+|
T Consensus       325 dedltari  332 (448)
T KOG0195|consen  325 DEDLTARI  332 (448)
T ss_pred             cchhhhhe
Confidence            88755433

>KOG0601|consensus

Probab=96.75  E-value=0.00033  Score=47.31  Aligned_cols=87  Identities=25%  Similarity=0.245  Sum_probs=61.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.|.+.+.....|......++-.|++.......     .-+++....+...|++.++.++|+...+|.|+++.||++..+
T Consensus       323 ~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~  402 (524)
T KOG0601|consen  323 GSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND  402 (524)
T ss_pred             hcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc
Confidence            445666666666665555554445543321111     225566777888999999999999999999999999999876


Q ss_pred             -CCeEEEeeceec
Q psy7276          77 -CDLKFFFYFFFS   88 (101)
Q Consensus        77 -~~~~i~dfgl~~   88 (101)
                       +..++.|||+..
T Consensus       403 ~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  403 GFFSKLGDFGCWT  415 (524)
T ss_pred             hhhhhcccccccc
Confidence             677888888654

>KOG1235|consensus

Probab=96.60  E-value=0.0088  Score=40.95  Aligned_cols=57  Identities=18%  Similarity=0.251  Sum_probs=38.1

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee----CCCeEEEeeceeccccCc
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT----TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~----~~~~~i~dfgl~~~~~~~   93 (101)
                      ...+...+..-+.+...  ..+-..|.+|.|-+|.|+++..    ++.+.+.|||+...+.+.
T Consensus       298 ~gi~~~~i~~~l~~~~~--~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  298 RGISPHDILNKLVEAYL--EQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             cCCCHHHHHHHHHHHHH--HHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            34555544443333322  2223567999999999999984    467999999998766554

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.54  E-value=0.011  Score=35.07  Aligned_cols=51  Identities=18%  Similarity=0.109  Sum_probs=45.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCCCCeEEeeCCCeEEEeece
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKFFFYFF   86 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~---~~i~~~~lk~~nil~~~~~~~~i~dfgl   86 (101)
                      ..++.....++.+++..+.++..   ..+...|++++|+.+..+++++++|..-
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~  108 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDD  108 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechh
Confidence            45788888999999999999876   4588999999999999999999999874

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1266|consensus

Probab=96.51  E-value=0.0021  Score=41.64  Aligned_cols=46  Identities=24%  Similarity=0.405  Sum_probs=39.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCeEEeeCCCeEE
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKF   81 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~nil~~~~~~~~i   81 (101)
                      .+......+|..|++.|+.|+|+..  ++|.++..+.+++..++-+|+
T Consensus       172 a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIki  219 (458)
T KOG1266|consen  172 ALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI  219 (458)
T ss_pred             hhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEe
Confidence            3556677789999999999999984  899999999999998888876

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.93  E-value=0.0078  Score=37.91  Aligned_cols=29  Identities=28%  Similarity=0.343  Sum_probs=25.4

Q ss_pred             CceeccCCCCCeEEeeC----CCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTT----CDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~----~~~~i~dfgl~~   88 (101)
                      +++|.|+.+.|++++.+    +.+.++||..|.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            57999999999999874    789999997655

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.81  E-value=0.031  Score=35.43  Aligned_cols=30  Identities=27%  Similarity=0.481  Sum_probs=26.2

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++.++...++||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            579999999999999888767899998753

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=95.75  E-value=0.0093  Score=37.87  Aligned_cols=30  Identities=27%  Similarity=0.411  Sum_probs=25.0

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++.+...-++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            479999999999999865556899998654

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=95.55  E-value=0.014  Score=35.39  Aligned_cols=29  Identities=28%  Similarity=0.433  Sum_probs=25.4

Q ss_pred             CceeccCCCCCeEEee-CCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNT-TCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~-~~~~~i~dfgl~~   88 (101)
                      +++|.|+.+.|++++. ++.+.++||-.+.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            5899999999999997 5789999997655

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.53  E-value=0.014  Score=35.52  Aligned_cols=29  Identities=24%  Similarity=0.244  Sum_probs=24.3

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      +++|.|+.+.|++++.++..-++||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            58999999999999865555699999765

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.42  E-value=0.08  Score=33.40  Aligned_cols=29  Identities=17%  Similarity=0.299  Sum_probs=24.7

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++. +.+.++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            47899999999999987 678999998543

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.41  E-value=0.018  Score=34.31  Aligned_cols=28  Identities=21%  Similarity=0.374  Sum_probs=23.7

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ..+|.|+.|.|+++..++ ++++||+-+-
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            468999999999987766 8999998654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=95.36  E-value=0.017  Score=35.18  Aligned_cols=28  Identities=21%  Similarity=0.205  Sum_probs=24.7

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++++.++ +.++||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            468999999999998877 9999998654

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.27  E-value=0.017  Score=35.22  Aligned_cols=29  Identities=17%  Similarity=0.038  Sum_probs=25.5

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++++.++.+.|+||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            48999999999999987777899998765

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.22  E-value=0.016  Score=36.32  Aligned_cols=30  Identities=23%  Similarity=0.340  Sum_probs=25.8

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++.++.+.|+||..+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            469999999999999987777899997644

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=95.17  E-value=0.058  Score=33.88  Aligned_cols=27  Identities=33%  Similarity=0.461  Sum_probs=24.7

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeece
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFF   86 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl   86 (101)
                      .++|.|+.+.|++.+..+.+.++||--
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEy  180 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEY  180 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEeccc
Confidence            589999999999999999999999953

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=95.16  E-value=0.055  Score=35.06  Aligned_cols=28  Identities=29%  Similarity=0.486  Sum_probs=24.9

Q ss_pred             ceeccCCCCCeEEeeCCC-eEEEeeceec
Q psy7276          61 VLHRDLKPSNLLLNTTCD-LKFFFYFFFS   88 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~-~~i~dfgl~~   88 (101)
                      ++|.|+.+.|++++.+.. +.++||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            999999999999998885 8999998654

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.15  E-value=0.011  Score=35.31  Aligned_cols=31  Identities=19%  Similarity=0.393  Sum_probs=21.0

Q ss_pred             CCceeccCCCCCeEEe-eCCCeEEEeeceecc
Q psy7276          59 ANVLHRDLKPSNLLLN-TTCDLKFFFYFFFSF   89 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~-~~~~~~i~dfgl~~~   89 (101)
                      ..++|.|+.+.|++++ .++.+.++||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             cEEEEeccccccceeeeccceeEEEecccceE
Confidence            3589999999999999 556668999986553

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=95.08  E-value=0.11  Score=35.30  Aligned_cols=50  Identities=8%  Similarity=0.131  Sum_probs=45.6

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEee
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFY   84 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~df   84 (101)
                      ..+.++-..+.++.++.+...+|..|-.-.|+.++|+++++++.++++|-
T Consensus       112 P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVds  161 (637)
T COG4248         112 PHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDS  161 (637)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcc
Confidence            34678889999999999999999999999999999999999999999883

>KOG2137|consensus

Probab=95.00  E-value=0.021  Score=39.99  Aligned_cols=48  Identities=23%  Similarity=0.398  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHC-CceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          46 LYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        46 ~~~i~~~l~~~h~~-~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +.++..|+.++|.. +++|..+.|+++.++..+..|+.+|+.+....++
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~  153 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGP  153 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCC
Confidence            34556788999975 7999999999999999999999999987766663

>TIGR02721 ycfN_thiK thiamine kinase

Probab=94.98  E-value=0.025  Score=34.85  Aligned_cols=28  Identities=29%  Similarity=0.389  Sum_probs=24.2

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++++.++ +.++||..+.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            579999999999998766 7899997655

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=94.81  E-value=0.032  Score=33.19  Aligned_cols=32  Identities=16%  Similarity=0.218  Sum_probs=26.1

Q ss_pred             CCceeccCCCCCeEEeeCC-----CeEEEeeceeccc
Q psy7276          59 ANVLHRDLKPSNLLLNTTC-----DLKFFFYFFFSFF   90 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~-----~~~i~dfgl~~~~   90 (101)
                      ..++|+|+.+.|+++..++     .+.++||..+..-
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g  156 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYG  156 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCcC
Confidence            4689999999999997543     5899999987643

subfamily of choline kinases

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.75  E-value=0.018  Score=34.51  Aligned_cols=30  Identities=27%  Similarity=0.500  Sum_probs=20.5

Q ss_pred             CCceeccCCCCCeEE-eeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLL-NTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~-~~~~~~~i~dfgl~~   88 (101)
                      ..++|+|+.+.||++ ..++.++++||-.|.
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            357999999999999 788999999997544

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=94.40  E-value=0.045  Score=34.42  Aligned_cols=29  Identities=17%  Similarity=0.331  Sum_probs=24.2

Q ss_pred             CceeccCCCCCeEEeeCCC-eEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCD-LKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~-~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++++.++. .-|+||+.+.
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            4799999999999987555 4699998765

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.22  E-value=0.69  Score=27.88  Aligned_cols=38  Identities=18%  Similarity=0.224  Sum_probs=28.8

Q ss_pred             HHHHHHHHCCceeccCCCCCeEEeeCC----CeEEEe-eceec
Q psy7276          51 RGLKYIHSANVLHRDLKPSNLLLNTTC----DLKFFF-YFFFS   88 (101)
Q Consensus        51 ~~l~~~h~~~i~~~~lk~~nil~~~~~----~~~i~d-fgl~~   88 (101)
                      .-.+++-+..|+.+|++|.||++....    .+.++| ||-..
T Consensus       129 ~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~  171 (199)
T PF10707_consen  129 EFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKE  171 (199)
T ss_pred             HHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCcc
Confidence            335677889999999999999997642    477888 66433

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PLN02236 choline kinase

Probab=94.21  E-value=0.12  Score=33.59  Aligned_cols=29  Identities=24%  Similarity=0.419  Sum_probs=24.9

Q ss_pred             CceeccCCCCCeEEee-CCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNT-TCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~-~~~~~i~dfgl~~   88 (101)
                      .++|+|+.+.|++++. ++.+.++||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            5899999999999986 4679999997655

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=93.32  E-value=0.093  Score=33.83  Aligned_cols=29  Identities=34%  Similarity=0.413  Sum_probs=24.3

Q ss_pred             CceeccCCCCCeEEee-CCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNT-TCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~-~~~~~i~dfgl~~   88 (101)
                      ..+|+|+.+.|++++. ++.++++||.-|-
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            3799999999999975 4689999997654

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=93.22  E-value=0.19  Score=31.41  Aligned_cols=41  Identities=27%  Similarity=0.366  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHHHH--CCceeccCCCCCeEEeeCCCeEEEeec
Q psy7276          45 FLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKFFFYF   85 (101)
Q Consensus        45 ~~~~i~~~l~~~h~--~~i~~~~lk~~nil~~~~~~~~i~dfg   85 (101)
                      +...-+.++.-.|+  .+.+|.|..|+||+-+..|.+|+.|=+
T Consensus       146 ~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  146 FITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             HHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChh
Confidence            33333566777784  479999999999999999999999965

The function of this family is unknown.

>PRK06148 hypothetical protein; Provisional

Probab=93.18  E-value=0.086  Score=38.97  Aligned_cols=30  Identities=20%  Similarity=0.252  Sum_probs=24.7

Q ss_pred             CCceeccCCCCCeEEeeCC--CeE-EEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTC--DLK-FFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~--~~~-i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++.++  .+. |+|||-+.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            4799999999999998775  555 99999543

>KOG2268|consensus

Probab=92.99  E-value=0.41  Score=31.67  Aligned_cols=33  Identities=9%  Similarity=0.243  Sum_probs=29.9

Q ss_pred             HHHHHHCCceeccCCCCCeEEeeCCCeEEEeec
Q psy7276          53 LKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYF   85 (101)
Q Consensus        53 l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfg   85 (101)
                      +--+...|++|.|..-=|+++++++.++++||-
T Consensus       215 Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFP  247 (465)
T KOG2268|consen  215 IVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFP  247 (465)
T ss_pred             HHHHHHcCceecccchheeEEecCCCEEEeech
Confidence            455678999999999999999999999999996

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=92.60  E-value=0.12  Score=33.47  Aligned_cols=29  Identities=17%  Similarity=0.347  Sum_probs=26.6

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+++.|++++.++.+-++||+++.
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~  227 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELAT  227 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence            57999999999999998889999999876

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=92.51  E-value=0.3  Score=30.67  Aligned_cols=30  Identities=17%  Similarity=0.304  Sum_probs=25.3

Q ss_pred             CceeccCCCCCeEEeeC--C---CeEEEeeceecc
Q psy7276          60 NVLHRDLKPSNLLLNTT--C---DLKFFFYFFFSF   89 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~--~---~~~i~dfgl~~~   89 (101)
                      .++|.|+...|+++..+  |   .+.++||.+++.
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccC
Confidence            58999999999999765  3   599999988764

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=92.34  E-value=0.34  Score=29.41  Aligned_cols=40  Identities=30%  Similarity=0.345  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeecee
Q psy7276          43 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF   87 (101)
Q Consensus        43 ~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~   87 (101)
                      ..-+.+++.-+..+|..||+-+|+++.|..     .-+++|||-+
T Consensus       167 ~~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  167 IRDIPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             hhHHHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence            345567788888999999999999998876     3478898854

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=92.20  E-value=0.11  Score=32.97  Aligned_cols=29  Identities=24%  Similarity=0.195  Sum_probs=26.1

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      +++|.|+.+.|++++.++.+.++||-.+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            79999999999999988899999997654

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK06149 hypothetical protein; Provisional

Probab=91.64  E-value=0.37  Score=35.69  Aligned_cols=30  Identities=10%  Similarity=0.039  Sum_probs=24.1

Q ss_pred             HCCceeccCCCCCeEEeeC--CC---eEEEeecee
Q psy7276          58 SANVLHRDLKPSNLLLNTT--CD---LKFFFYFFF   87 (101)
Q Consensus        58 ~~~i~~~~lk~~nil~~~~--~~---~~i~dfgl~   87 (101)
                      ..+++|.|+...|++++.+  +.   .-|+|||-+
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~  241 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDL  241 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccc
Confidence            4579999999999999865  23   479999954

>PRK11768 serine/threonine protein kinase; Provisional

Probab=91.61  E-value=0.13  Score=33.09  Aligned_cols=28  Identities=25%  Similarity=0.172  Sum_probs=23.2

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++ + .+.++||+-+.
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            3689999999999994 4 67899998654

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=89.72  E-value=0.81  Score=30.61  Aligned_cols=30  Identities=20%  Similarity=0.283  Sum_probs=24.9

Q ss_pred             HCCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          58 SANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        58 ~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ...++|.|+.+.|+++..+ .++++||-++.
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEeccccc
Confidence            4468999999999999765 58999997655

>KOG0606|consensus

Probab=89.40  E-value=0.072  Score=39.42  Aligned_cols=52  Identities=25%  Similarity=0.248  Sum_probs=44.0

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeece
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFF   86 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl   86 (101)
                      ++.++.-+..+...+..+.+++|...+.|+++++.+.+....+..++.+|+.
T Consensus       899 ~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t  950 (1205)
T KOG0606|consen  899 GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGT  950 (1205)
T ss_pred             CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccc
Confidence            4455555666777788889999998899999999999999999999999983

>PHA03111 Ser/Thr kinase; Provisional

Probab=88.60  E-value=2.4  Score=28.23  Aligned_cols=35  Identities=37%  Similarity=0.471  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHHHHHHH----CCceeccCCCCCeEEeeC
Q psy7276          42 ICYFLYQILRGLKYIHS----ANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus        42 ~~~~~~~i~~~l~~~h~----~~i~~~~lk~~nil~~~~   76 (101)
                      +..++.|++--.-.+..    ...+|.|+||+|||+-+.
T Consensus       281 ikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        281 IKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            34455666543322322    357899999999998554

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=87.98  E-value=0.43  Score=31.54  Aligned_cols=30  Identities=20%  Similarity=0.234  Sum_probs=24.4

Q ss_pred             HCCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          58 SANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        58 ~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ...++|.|+.+.|+++..++ ++++|+.++.
T Consensus       191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~  220 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFAF  220 (370)
T ss_pred             cceeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence            44789999999999996654 7799987655

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PTZ00296 choline kinase; Provisional

Probab=84.52  E-value=4.4  Score=27.57  Aligned_cols=28  Identities=18%  Similarity=0.285  Sum_probs=22.3

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++... +.++++||--|.
T Consensus       285 VfCHNDl~~~NiL~~~-~~l~LIDfEYAg  312 (442)
T PTZ00296        285 VFCHNDLQENNIINTN-KCLRLIDFEYSG  312 (442)
T ss_pred             eEEeCCCCccceeecC-CCEEEEeecccc
Confidence            5799999999998654 449999996543

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=83.26  E-value=1.5  Score=29.18  Aligned_cols=17  Identities=53%  Similarity=0.856  Sum_probs=14.3

Q ss_pred             CceeccCCCCCeEEeeC
Q psy7276          60 NVLHRDLKPSNLLLNTT   76 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~   76 (101)
                      ..+|.|+||+|||+-+.
T Consensus       299 nF~H~DLKPdNILiFds  315 (434)
T PF05445_consen  299 NFLHVDLKPDNILIFDS  315 (434)
T ss_pred             eeeecccCcCcEEEecC
Confidence            57899999999998543

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PLN02876 acyl-CoA dehydrogenase

Probab=83.21  E-value=1.4  Score=32.07  Aligned_cols=29  Identities=17%  Similarity=0.353  Sum_probs=22.9

Q ss_pred             CceeccCCCCCeEEeeC-CC-eEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTT-CD-LKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~-~~-~~i~dfgl~~   88 (101)
                      .++|.|+++.|++++.+ .. +-|.||.++.
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~  256 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELST  256 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeeccc
Confidence            48999999999999753 33 5789987654

>KOG2464|consensus

Probab=82.29  E-value=9.6  Score=23.72  Aligned_cols=41  Identities=24%  Similarity=0.359  Sum_probs=30.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeCC
Q psy7276          37 LSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~~   77 (101)
                      -+...+..+..+....+.-... .+..|+|+...|++++..+
T Consensus       134 ~~~~~~~si~~q~~~~l~i~~~~~~~~hrdl~~gnili~k~~  175 (246)
T KOG2464|consen  134 ESKNQALSIFWQLVLSLAIAEKSLGFEHRDLHLGNILIKKTG  175 (246)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhhcccccccCcCcEEEeccc
Confidence            3455666677777766665544 4899999999999998854

>PRK12396 5-methylribose kinase; Reviewed

Probab=80.84  E-value=3.5  Score=27.79  Aligned_cols=29  Identities=17%  Similarity=0.283  Sum_probs=23.2

Q ss_pred             HCCceeccCCCCCeEEeeCCCeEEEeecee
Q psy7276          58 SANVLHRDLKPSNLLLNTTCDLKFFFYFFF   87 (101)
Q Consensus        58 ~~~i~~~~lk~~nil~~~~~~~~i~dfgl~   87 (101)
                      ...++|.|+.+.||+++.+ .++++|--++
T Consensus       226 ~~aLlHGDlHtGSI~v~~~-~~kvIDpEFA  254 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKND-STKVIDPEFA  254 (409)
T ss_pred             chhhccCcCCCCCEEecCC-ceEEEccccc
Confidence            4579999999999999875 4788885543

---

Homologous Structure Templates

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-31
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-30
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-30
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-29
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-29
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-29
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-29
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	9e-29
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-28
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-28
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-27
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-27
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-25
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-25
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-25
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-24
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-24
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-18
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-17
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-16
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-16
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	5e-16
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-16
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-16
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	9e-16
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-16
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-15
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-15
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	6e-15
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-14
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-14
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	8e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-13
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-13
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-13
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-13
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-13
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-12
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-12
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-12
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-12
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	8e-12
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-12
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-11
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-11
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-11
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-11
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-11
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-10
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-10
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-10
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-10
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-10
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-10
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-10
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-10
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-10
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-09
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-09
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-09
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-09
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-09
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-09
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	7e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-08
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-08
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-08
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-08
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-08
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-08
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	5e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	8e-08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-07
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	9e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-06
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	3e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	4e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-06
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	4e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-06
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-06
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-06
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	6e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	8e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	9e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	9e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	7e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	8e-04

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  111 bits (279), Expect = 3e-31
 Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D HR    Q LS+DHI YF+YQ LR +K +H +NV+HRDLKPSNLL+N+ CDLK
Sbjct: 98  TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLK 152

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  109 bits (274), Expect = 3e-30
 Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D H   +   L   H  Y +YQ+++ +KY+HS  +LHRD+KPSN+LLN  C +K
Sbjct: 95  TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVK 149

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  108 bits (273), Expect = 4e-30
 Identities = 47/55 (85%), Positives = 50/55 (90%), Gaps = 1/55 (1%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D ++  K Q LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  108 bits (271), Expect = 2e-29
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             L+  HI   LY +L G+KY+HSA +LHRDLKP+N L+N  C +K
Sbjct: 151 VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVK 196

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  107 bits (268), Expect = 3e-29
 Identities = 21/46 (45%), Positives = 30/46 (65%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             L+ +HI   LY +L G  +IH + ++HRDLKP+N LLN  C +K
Sbjct: 124 IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVK 169

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  105 bits (264), Expect = 5e-29
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D  +    + S + I Y +YQ+L+GLKYIHSA V+HRDLKP NL +N  C+LK
Sbjct: 113 TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 166

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  105 bits (264), Expect = 6e-29
 Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D  +  K+++L  D I + +YQ+L+GL+YIH+A ++HRDLKP NL +N  C+LK
Sbjct: 114 TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK 168

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  105 bits (263), Expect = 9e-29
 Identities = 22/50 (44%), Positives = 29/50 (58%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             +   +S  HI YF+Y IL GL  +H A V+HRDL P N+LL    D+ 
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDIT 174

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  103 bits (259), Expect = 2e-28
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-CDLK 80
           +D     +   L  +H   F+YQ+LRGLKYIHSANVLHRDLKP+NL +NT    LK
Sbjct: 106 TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLK 161

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  103 bits (259), Expect = 4e-28
 Identities = 32/55 (58%), Positives = 45/55 (81%), Gaps = 1/55 (1%)

Query: 27  SDSHRT-KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +D +   K Q+L++DH+ + +YQILRGLKYIHSA+++HRDLKPSNL +N  C+LK
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  101 bits (253), Expect = 3e-27
 Identities = 22/54 (40%), Positives = 38/54 (70%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++  +     L ++ + Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LK
Sbjct: 114 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  101 bits (253), Expect = 5e-27
 Identities = 22/54 (40%), Positives = 38/54 (70%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++  +     L ++ + Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LK
Sbjct: 151 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 96.0 bits (239), Expect = 3e-25
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TTCDLK 80
              S     + +  + I  ++YQ+ R + +IHS  + HRD+KP NLL+N     LK
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLK 182

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 95.5 bits (238), Expect = 6e-25
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LK 80
            +  +    Q L   ++  ++YQ+ R L YIHS  + HRD+KP NLLL+     LK
Sbjct: 142 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 197

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 94.3 bits (235), Expect = 8e-25
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIH--SANVLHRDLKPSNLLLN-TTCDLK 80
              ++  +        I  FL+Q++R +  +H  S NV HRD+KP N+L+N     LK
Sbjct: 115 CCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLK 172

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 92.7 bits (231), Expect = 2e-24
 Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TTCD 78
           +      +D  +  YQ L++  I +++Y+IL+ L Y HS  ++HRD+KP N++++     
Sbjct: 111 VFEHVNNTDFKQL-YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK 169

Query: 79  LK 80
           L+
Sbjct: 170 LR 171

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 92.4 bits (230), Expect = 6e-24
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LK 80
            S  +    Q +    I  ++YQ+LR L YIHS  + HRD+KP NLLL+     LK
Sbjct: 127 ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLK 182

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 76.4 bits (189), Expect = 3e-18
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 12  IRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDL 66
            R   +  LV F EY D           + +    +    +Q L+ + + H  N +HRD+
Sbjct: 71  FRRKRRLHLV-F-EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDV 128

Query: 67  KPSNLLLNTTCDLK 80
           KP N+L+     +K
Sbjct: 129 KPENILITKHSVIK 142

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 73.4 bits (181), Expect = 4e-17
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 12  IRHSTKESLVSFREYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDL 66
            +   +  LV F E+ D             L    +  +L+QI+ G+ + HS N++HRD+
Sbjct: 93  CKKKKRWYLV-F-EFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150

Query: 67  KPSNLLLNTTCDLK 80
           KP N+L++ +  +K
Sbjct: 151 KPENILVSQSGVVK 164

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 69.9 bits (172), Expect = 4e-16
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 5/61 (8%)

Query: 25  EYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           E+ D    KY       L  + +  FL+Q+L+GL + HS NVLHRDLKP NLL+N   +L
Sbjct: 81  EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL 140

Query: 80  K 80
           K
Sbjct: 141 K 141

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 69.9 bits (172), Expect = 5e-16
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)

Query: 24  REYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +++ D+       +    I  +L+Q+L+GL + HS  VLHRDLKP NLL+NT   +K
Sbjct: 89  KKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 69.8 bits (172), Expect = 5e-16
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 24  REYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++  D        L +     FL Q+L G+ Y H   VLHRDLKP NLL+N   +LK
Sbjct: 87  KKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELK 140

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 69.9 bits (172), Expect = 6e-16
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 5/61 (8%)

Query: 25  EYSDSHRTKY-----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           EY D    +Y       ++  ++  FL+Q+LRGL Y H   VLHRDLKP NLL+N   +L
Sbjct: 80  EYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGEL 139

Query: 80  K 80
           K
Sbjct: 140 K 140

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 69.9 bits (172), Expect = 7e-16
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 24  REYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++  D ++T    L +  I  +LYQ+LRG+ + H   +LHRDLKP NLL+N+   LK
Sbjct: 106 KKVLDENKTG---LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALK 159

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 69.5 bits (171), Expect = 9e-16
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Y D        +  + I   ++Q+LRGL ++HS  V+HRDLKP N+L+ ++  +K
Sbjct: 108 YLDKVPEPG--VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 160

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 69.5 bits (171), Expect = 9e-16
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 26  YSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Y DS       + L  + + YF +Q+L+GL + H   +LHRDLKP NLL+N    LK
Sbjct: 92  YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLK 148

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 68.8 bits (169), Expect = 1e-15
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 24  REYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R Y D        L  + I   + Q LRGL ++H+  ++HRDLKP N+L+ +   +K
Sbjct: 106 RTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVK 160

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 68.0 bits (167), Expect = 3e-15
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 16  TKESLVSFREYSDSHRTKY----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 71
               L    EY+++   KY      +S   I  FLYQ++ G+ + HS   LHRDLKP NL
Sbjct: 104 HNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163

Query: 72  LLNTTCDLK 80
           LL+ +   +
Sbjct: 164 LLSVSDASE 172

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 68.0 bits (167), Expect = 3e-15
 Identities = 21/46 (45%), Positives = 30/46 (65%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             L+  HI  ++   L+GL+Y+H   +LHRDLKP+NLLL+    LK
Sbjct: 107 LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLK 152

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 67.3 bits (165), Expect = 6e-15
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            + +   I   +  +L GL YIH   +LHRD+K +N+L+     LK
Sbjct: 119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 164

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 66.0 bits (161), Expect = 2e-14
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 26  YSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               HR      K  +L    +   LYQIL G+ Y+H+  VLHRDLKP+N+L+      +
Sbjct: 109 IIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 168

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 65.4 bits (160), Expect = 2e-14
 Identities = 18/51 (35%), Positives = 29/51 (56%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            + + ++L          QI +G+ YIHS  +++RDLKPSN+ L  T  +K
Sbjct: 112 EKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 64.3 bits (157), Expect = 6e-14
 Identities = 16/69 (23%), Positives = 28/69 (40%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF 89
           +           +   L Q+ RGL+YIHS +++H D+KPSN+ ++ T             
Sbjct: 105 NYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDED 164

Query: 90  FFHFTVHDV 98
            +       
Sbjct: 165 DWASNKVMF 173

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 64.2 bits (157), Expect = 8e-14
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + L+     Y+L QI+ G +Y+H   V+HRDLK  NL LN   ++K
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVK 181

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 64.3 bits (156), Expect = 1e-13
 Identities = 10/62 (16%), Positives = 17/62 (27%)

Query: 19  SLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
            L       D             +     Q++R    + S  ++H    P NL +     
Sbjct: 173 DLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR 232

Query: 79  LK 80
           L 
Sbjct: 233 LM 234

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 63.0 bits (154), Expect = 2e-13
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           L   R   + H+ + + L+     Y+L QI+ G +Y+H   V+HRDLK  NL LN   ++
Sbjct: 96  LCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 154

Query: 80  K 80
           K
Sbjct: 155 K 155

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 62.6 bits (153), Expect = 2e-13
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           +    E +   + + +  S +   +F++QI+ G+ Y+HS  +LHRDL  SNLLL    ++
Sbjct: 92  MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNI 151

Query: 80  K 80
           K
Sbjct: 152 K 152

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 62.4 bits (152), Expect = 4e-13
 Identities = 17/45 (37%), Positives = 27/45 (60%)

Query: 32  TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
            +   L  D   Y+L Q L GL+Y+H+  +LH D+K  N+LL++ 
Sbjct: 142 KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 186

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.0 bits (151), Expect = 5e-13
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            ++      D       QIL  L YIHS  ++HRDLKP N+ ++ + ++K
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK 156

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 61.9 bits (151), Expect = 5e-13
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           K + +       +   +L  +  IH   ++H DLKP+N L+
Sbjct: 120 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 62.0 bits (151), Expect = 5e-13
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             L    +  +L   L  L ++HS  ++H D+KP+N+ L      K
Sbjct: 152 ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCK 197

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 61.6 bits (150), Expect = 6e-13
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             K      D I  +  QI   LK++H   +LHRD+K  N+ L     ++
Sbjct: 116 AQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQ 165

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 61.6 bits (150), Expect = 7e-13
 Identities = 20/51 (39%), Positives = 29/51 (56%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             TK   L  + I Y   +ILRGL ++H   V+HRD+K  N+LL    ++K
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 169

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 61.6 bits (150), Expect = 7e-13
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           K + +       +   +L  +  IH   ++H DLKP+N L+
Sbjct: 101 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 141

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 61.4 bits (149), Expect = 9e-13
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           K + +       +   +L  +  IH   ++H DLKP+N L+
Sbjct: 148 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 61.2 bits (148), Expect = 1e-12
 Identities = 14/62 (22%), Positives = 31/62 (50%)

Query: 19  SLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           +L +F E   SH + ++ L +        Q++R L  +H   ++H  L+P +++L+    
Sbjct: 190 NLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG 249

Query: 79  LK 80
           + 
Sbjct: 250 VF 251

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 60.8 bits (148), Expect = 1e-12
 Identities = 13/52 (25%), Positives = 29/52 (55%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             + + + +    +  +  Q+   L+++HS  V+HRD+KP+N+ +  T  +K
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVK 176

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               K  +        ++ ++   L Y HS  V+HRD+KP NLLL +  +LK
Sbjct: 98  RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK 149

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 60.1 bits (146), Expect = 2e-12
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            R   +        +   QI   ++++HS  ++HRDLKPSN+       +K
Sbjct: 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK 158

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 59.7 bits (145), Expect = 3e-12
 Identities = 22/54 (40%), Positives = 31/54 (57%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           SD  R + + L+ D I   L   L+GL+Y+H    +HRD+K  N+LLNT    K
Sbjct: 112 SDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAK 165

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 59.6 bits (145), Expect = 4e-12
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 19  SLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTC 77
           S   F  Y   +      +  + +       ++ L ++     ++HRD+KPSN+LL+ + 
Sbjct: 106 SFDKF--YKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG 163

Query: 78  DLK 80
           ++K
Sbjct: 164 NIK 166

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 59.5 bits (144), Expect = 4e-12
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + R   +   +    +   QI   ++++HS  ++HRDLKPSN+       +K
Sbjct: 153 NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK 204

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               K+ R        F+ ++   L Y H   V+HRD+KP NLL+    +LK
Sbjct: 103 KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELK 154

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 58.9 bits (143), Expect = 5e-12
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                   + L+   I     Q+L  L ++HS  ++HRDLK  N+L+    D++
Sbjct: 104 DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIR 157

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 58.5 bits (142), Expect = 7e-12
 Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 31  RTKYQRLSND--HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           R+K+  L ++   I ++  QIL GLKY+H   ++HRD+K  N+L+NT
Sbjct: 111 RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 157

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 58.5 bits (142), Expect = 8e-12
 Identities = 20/56 (35%), Positives = 28/56 (50%)

Query: 25  EYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
              +  + K   L+ D I + L  I RGL+ IH+    HRDLKP+N+LL       
Sbjct: 119 NEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV 174

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 58.5 bits (142), Expect = 8e-12
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               +    I     + L+ L+++HS  V+HRD+K  N+LL     +K
Sbjct: 109 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK 156

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.5 bits (142), Expect = 8e-12
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
              RL+ + I      +L+ L Y+H+  V+HRD+K  ++LL     +K
Sbjct: 134 SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVK 181

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 58.0 bits (141), Expect = 1e-11
 Identities = 16/46 (34%), Positives = 30/46 (65%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + LS D   ++   +++G++Y+H   ++HRD+KPSNLL+     +K
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIK 177

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 58.1 bits (141), Expect = 1e-11
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 25  EY----SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           EY    S     +   L    I   L +IL+GL Y+HS   +HRD+K +N+LL+   ++K
Sbjct: 100 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 159

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 58.2 bits (141), Expect = 1e-11
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 25  EY-----SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           EY     SD      + L    I    +  L+GL Y+HS N++HRD+K  N+LL+    +
Sbjct: 134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 193

Query: 80  K 80
           K
Sbjct: 194 K 194

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 58.1 bits (140), Expect = 1e-11
 Identities = 14/62 (22%), Positives = 31/62 (50%)

Query: 19  SLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           +L +F E   SH + ++ L +        Q++R L  +H   ++H  L+P +++L+    
Sbjct: 185 NLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG 244

Query: 79  LK 80
           + 
Sbjct: 245 VF 246

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 56.9 bits (138), Expect = 3e-11
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLK 80
           K Q +  D +      I++ L+++HS  +V+HRD+KPSN+L+N    +K
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 150

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 56.8 bits (137), Expect = 4e-11
 Identities = 15/39 (38%), Positives = 24/39 (61%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           Q+L       +L +IL  L Y+HS  +++ DLKP N++L
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML 215

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 56.7 bits (137), Expect = 4e-11
 Identities = 9/48 (18%), Positives = 21/48 (43%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
            +    L        L  ++ G+ ++    ++HR++KP N++     D
Sbjct: 103 PSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED 150

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 56.5 bits (137), Expect = 4e-11
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLK 80
               + Q L  + +   + Q+   LK  H  +     VLHRDLKP+N+ L+   ++K
Sbjct: 100 KGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 56.6 bits (136), Expect = 4e-11
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
                 L    I   L  I   L+Y+H   ++HRDLKP N++L     
Sbjct: 112 FENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 159

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 56.1 bits (136), Expect = 5e-11
 Identities = 18/45 (40%), Positives = 27/45 (60%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R        +  Q++ GL+Y+HS  ++H+D+KP NLLL T   LK
Sbjct: 105 RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLK 149

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 56.1 bits (136), Expect = 6e-11
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               +       F +Q++ G+ Y+H   + HRD+KP NLLL+   +LK
Sbjct: 98  PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               +       F +Q++ G+ Y+H   + HRD+KP NLLL+   +LK
Sbjct: 98  PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           L    I   L ++L GL+Y+H    +HRD+K  N+LL     ++
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ 161

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 32  TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLK 80
           T+   L  +    F +Q+L  +++ H+  VLHRD+K  N+L++    +LK
Sbjct: 141 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 190

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLK 80
           K  R+    +      +++GL Y+     ++HRD+KPSN+L+N+  ++K
Sbjct: 124 KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 172

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 9/48 (18%), Positives = 21/48 (43%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
            +    L        L  ++ G+ ++    ++HR++KP N++     D
Sbjct: 103 PSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED 150

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 32  TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLK 80
           T+   L       F  Q++  +++ HS  V+HRD+K  N+L++      K
Sbjct: 131 TEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK 180

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 43  CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
              +  +L  +  +H  N++HRDLKP N+LL+   ++K
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIK 164

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           K            L Q   GL ++HS N++HRDLKP N+L++  
Sbjct: 111 KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 55.1 bits (133), Expect = 2e-10
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLK 80
           +     +    +      I++ L Y+     V+HRD+KPSN+LL+    +K
Sbjct: 115 KRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIK 165

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 12/38 (31%), Positives = 24/38 (63%)

Query: 43  CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
              +  +L  + ++H+ N++HRDLKP N+LL+    ++
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIR 240

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 18/48 (37%), Positives = 25/48 (52%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K+ R+          QIL  + Y H   V+HRDLKP N+LL+   + K
Sbjct: 104 KHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK 151

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 54.3 bits (131), Expect = 3e-10
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL--NTTCDLK 80
              R S D   +F  Q+L G+ Y HS  + HRDLK  N LL  +    LK
Sbjct: 109 NAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLK 158

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.0 bits (130), Expect = 4e-10
 Identities = 11/48 (22%), Positives = 25/48 (52%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++ RL      Y   Q++  + Y+   +++HRD+K  N+++     +K
Sbjct: 123 RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIK 170

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 54.0 bits (130), Expect = 4e-10
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLK 80
             +    I   +  +L    YIH+  N+ HRD+KPSN+L++    +K
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVK 192

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 53.8 bits (130), Expect = 4e-10
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + +R++ D    F  QI+  ++Y H   ++HRDLKP NLLL+   ++K
Sbjct: 101 EKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVK 148

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 53.6 bits (129), Expect = 4e-10
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLK 80
                 LS D +    YQ  R ++++H     ++HRDLK  NLLL+    +K
Sbjct: 127 MESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIK 178

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.8 bits (129), Expect = 4e-10
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 37  LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           ++   I Y L  +L+ L YIH    +HR +K S++L++    + 
Sbjct: 125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVY 168

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 53.3 bits (128), Expect = 6e-10
 Identities = 20/48 (41%), Positives = 25/48 (52%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           K  RL          QIL G+ Y H   V+HRDLKP N+LL+   + K
Sbjct: 109 KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK 156

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 53.1 bits (128), Expect = 6e-10
 Identities = 16/47 (34%), Positives = 28/47 (59%)

Query: 32  TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
              +RL       + YQ+L  ++Y+H   ++HRDLKP N+LL++  +
Sbjct: 106 VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 152

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 53.2 bits (128), Expect = 7e-10
 Identities = 16/44 (36%), Positives = 28/44 (63%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           +RL       + YQ+L  ++Y+H   ++HRDLKP N+LL++  +
Sbjct: 234 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 277

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 52.9 bits (127), Expect = 1e-09
 Identities = 14/44 (31%), Positives = 27/44 (61%)

Query: 32  TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
            ++ ++S D    ++ Q+ +GL ++H  N +H DLKP N++  T
Sbjct: 247 DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 290

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 52.7 bits (127), Expect = 1e-09
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            + R+          QI+  ++Y H   ++HRDLK  NLLL+   ++K
Sbjct: 107 AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIK 154

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.5 bits (126), Expect = 1e-09
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 25  EYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           E  +      +     +    L QI  G+ ++HS  ++HRDLKP N+L++T+
Sbjct: 100 ESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 52.3 bits (125), Expect = 2e-09
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
            T  + +    +  F  ++L  ++ +H   ++H D+KP N +L   
Sbjct: 163 NTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNG 208

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           FL QIL G+ Y+HS  + H DLKP N++L   
Sbjct: 113 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDK 144

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 52.0 bits (125), Expect = 2e-09
 Identities = 11/34 (32%), Positives = 22/34 (64%)

Query: 42  ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           +  ++ Q   GLK++H  +++H D+KP N++  T
Sbjct: 151 VINYMRQACEGLKHMHEHSIVHLDIKPENIMCET 184

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 16/46 (34%), Positives = 28/46 (60%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
             + +S + +   + QIL G+ Y+H  N++H DLKP N+LL++   
Sbjct: 124 LAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP 169

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 14  HSTKESLVSFREYSDS-----HRTKYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDL 66
              K+ +V   E   S     +  +++ +    +  +  QIL+GL+++H+    ++HRDL
Sbjct: 98  VKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDL 157

Query: 67  KPSNLLLNTT 76
           K  N+ +   
Sbjct: 158 KCDNIFITGP 167

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 10/34 (29%), Positives = 22/34 (64%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           +++Q+   L+++HS N+ H D++P N++  T   
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS 140

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 14/31 (45%), Positives = 21/31 (67%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           F+ QIL G+ Y+H+  + H DLKP N++L  
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           FL QIL G+ Y+HS  + H DLKP N++L   
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
            + QIL  + Y HS  ++HR+LKP NLLL +   
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 166

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           F+ QI  G++++H   +LH DLKP N+L   
Sbjct: 192 FMKQICEGIRHMHQMYILHLDLKPENILCVN 222

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
              K   L  +       +I++G+ Y+H+  +LH+DLK  N+  +
Sbjct: 121 RDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD 164

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
            + QIL  + Y HS  ++HR+LKP NLLL +   
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 143

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 10/48 (20%), Positives = 24/48 (50%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
               ++       +    + L + H   ++HRD+KP+N++++ T  +K
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           L+ I + ++Y+H+  V+HRDLKPSN+L      
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 14/31 (45%), Positives = 21/31 (67%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           F+ QIL G+ Y+H+  + H DLKP N++L  
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
            +  K          ++  +I+  L+Y+H   ++HRDLKP N+LLN
Sbjct: 119 KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            +  LS D    F  QIL G+K+ H   ++HRD+KP N+L+++   LK
Sbjct: 104 SHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK 151

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 50.4 bits (121), Expect = 5e-09
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                +     +     Q  RG+ Y+H+ +++HRDLK +N+ L+    +K
Sbjct: 111 HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVK 160

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 50.5 bits (121), Expect = 6e-09
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           + K+Q  S   +  F + IL+ L  +H   ++H DLKP N+LL 
Sbjct: 191 KNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK 234

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 50.4 bits (121), Expect = 7e-09
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           + QIL  + Y+H   ++HRDLKP NLL  T
Sbjct: 154 VKQILEAVAYLHENGIVHRDLKPENLLYAT 183

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 19  SLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           +L    +  DS     QR+S      F   I  G+ Y+HS N++HRDL   N L+ 
Sbjct: 93  TLRGIIKSMDSQYPWSQRVS------FAKDIASGMAYLHSMNIIHRDLNSHNCLVR 142

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 43  CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
            +++ QIL  L+Y H  N++HRD+KP  +LL +
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 165

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           + QIL  + + H   V+HR+LKP NLLL +   
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLK 148

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 49.8 bits (119), Expect = 1e-08
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
                 I   + QI   L Y+H+  + HRD+KP N L +T
Sbjct: 164 VQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           S + + + LS  ++   + Q++  L Y HS +V+H+DLKP N+L   T
Sbjct: 113 SAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT 160

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
            +  +L  + Y H  NV HRDLKP N L  T   
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP 144

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
           +  I   ++Y+HS N+ HRD+KP NLL  + 
Sbjct: 167 MKSIGEAIQYLHSINIAHRDVKPENLLYTSK 197

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           + +++  + ++H   V+HRDLKP NLL   
Sbjct: 112 MRKLVSAVSHMHDVGVVHRDLKPENLLFTD 141

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           + Q+L  +KY+H   ++HRDLKP NLL  T  +
Sbjct: 112 IQQVLSAVKYLHENGIVHRDLKPENLLYLTPEE 144

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 6/53 (11%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLK 80
           H      +       F   + RG+ ++H+    +    L   +++++     +
Sbjct: 101 HEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTAR 153

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           +  I   ++Y+HS N+ HRD+KP NLL  +   
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 155

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT 76
             K   +        +  I  G++Y+ + N  ++HRDL+  N+ L + 
Sbjct: 113 LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 36  RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 76
            L+       + QI   L   H+A   HRD+KP N+L++  
Sbjct: 130 PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSAD 170

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           +  +   L ++H+  + HRDLKP N+L   
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEH 146

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           +  I   ++++HS N+ HRD+KP NLL  +
Sbjct: 134 MRDIGTAIQFLHSHNIAHRDVKPENLLYTS 163

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 14/30 (46%), Positives = 22/30 (73%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           + Q+  G+ Y+H  N++HRDLKP N+LL +
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLES 156

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLN 74
           +R+  D +  +  QI RG+ Y+H      ++HRDLK SN+L+ 
Sbjct: 100 KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           R  Y     + I  +  +IL+ L Y+   ++ H DLKP N+LL+
Sbjct: 128 RNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLD 171

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLK 80
           ++L         Y + +G+ Y+H+ N  ++HR+LK  NLL++    +K
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVK 179

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.2 bits (115), Expect = 4e-08
 Identities = 15/30 (50%), Positives = 22/30 (73%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           + Q+L G+ Y+H   ++HRDLKP NLLL +
Sbjct: 132 IRQVLSGITYMHKNKIVHRDLKPENLLLES 161

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 48.0 bits (115), Expect = 4e-08
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
              +     DHI    YQI + + ++HS  + H DLKP N+L  
Sbjct: 109 ENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFV 152

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 46  LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           + Q+  G+ Y+H  N++HRDLKP N+LL +   
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 48.2 bits (115), Expect = 5e-08
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNT 75
           QIL G+ Y+H  N++HRD+KP N+LL  
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLEN 181

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLN 74
                   +  H   +  Q  +G+ Y+HS     ++HRDLKP NLLL 
Sbjct: 92  GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 139

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
              +Q     H+ +  YQ+   L+++H   + H DLKP N+L  
Sbjct: 114 ENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 157

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 47.8 bits (114), Expect = 6e-08
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNT 75
           Q+L G+ Y+H  N++HRDLKP NLLL +
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLES 171

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 47.3 bits (113), Expect = 7e-08
 Identities = 18/46 (39%), Positives = 30/46 (65%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           SH  +  R S  H  ++  QI+   +Y+HS ++++RDLKP NLL++
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 47.0 bits (112), Expect = 8e-08
 Identities = 5/29 (17%), Positives = 9/29 (31%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNTT 76
            +       H A V      PS + ++  
Sbjct: 137 SLAAAADAAHRAGVALSIDHPSRVRVSID 165

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 17/46 (36%), Positives = 29/46 (63%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           S   K QR  N    ++  ++   L+Y+HS ++++RDLKP N+LL+
Sbjct: 95  SLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD 140

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 12/45 (26%), Positives = 25/45 (55%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
            H  +      + +  F+ +++  L Y+ +  ++HRD+KP N+LL
Sbjct: 104 YHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL 148

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 44.9 bits (106), Expect = 6e-07
 Identities = 15/44 (34%), Positives = 31/44 (70%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           H +++   S   + ++  +I+ GL+++H+  V++RDLKP+N+LL
Sbjct: 282 HLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
             +      ++  +++  L  IHS   +HRD+KP N+LL
Sbjct: 163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 44.5 bits (105), Expect = 9e-07
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 18  ESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLN 74
             L+ +   S      YQ L    +   + Q+L+GL Y+H+   ++H D+KP N+LL+
Sbjct: 129 HHLLKWIIKS-----NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS 181

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLN 74
           + +++ +   ++     Q+L GL Y+H    ++H D+KP N+L+ 
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 11/39 (28%), Positives = 24/39 (61%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
            RL  +   ++L +++  +  +H  + +HRD+KP N+L+
Sbjct: 170 DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 208

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 10/55 (18%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSA--------NVLHRDLKPSNLLL--NTTC 77
           +   L        +  I  GL ++H           + HRDLK  N+L+  N  C
Sbjct: 98  QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC 152

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 15/63 (23%), Positives = 28/63 (44%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFF 86
            D      ++LS   +     Q++  ++++HS + LHRD+KP N L+         +   
Sbjct: 90  EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 149

Query: 87  FSF 89
           F  
Sbjct: 150 FGL 152

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 24/39 (61%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           +R+  +   ++L +I+  +  +H    +HRD+KP N+LL
Sbjct: 157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 11/45 (24%), Positives = 29/45 (64%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           +H ++ +R +   +  ++ +I+  L+++H   +++RD+K  N+LL
Sbjct: 148 THLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 13/44 (29%), Positives = 29/44 (65%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           H ++ +  + +   ++  +I+  L+Y+HS +V++RD+K  NL+L
Sbjct: 95  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           H  K +R       ++  +I+  L ++H   +++RDLK  N+LL
Sbjct: 114 HIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL 157

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           H  +  R    H  ++  +I  GL ++ S  +++RDLK  N++L++
Sbjct: 111 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS 156

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           H     +       ++  +I+ GL+++HS  +++RDLK  N+LL+ 
Sbjct: 108 HIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK 153

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           H  + +        ++  +I   L Y+HS N+++RDLKP N+LL
Sbjct: 129 HLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL 172

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           H  + ++L  +H  ++  +I   L Y+H   +++RDLK  N+LL
Sbjct: 100 HMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 143

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNT 75
           +IL  L+YIH    +H D+K SNLLLN 
Sbjct: 160 RILDILEYIHEHEYVHGDIKASNLLLNY 187

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           H  + ++L  +H  ++  +I   L Y+H   +++RDLK  N+LL
Sbjct: 143 HMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 186

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.4 bits (100), Expect = 4e-06
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 8/56 (14%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSAN--------VLHRDLKPSNLLLNTTCDLK 80
           K   L    +    Y  + GL ++H+          + HRDLK  N+L+       
Sbjct: 127 KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 42.4 bits (100), Expect = 4e-06
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNT 75
           ++L  L+YIH    +H D+K +NLLL  
Sbjct: 159 RMLDVLEYIHENEYVHGDIKAANLLLGY 186

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 42.4 bits (100), Expect = 4e-06
 Identities = 16/61 (26%), Positives = 27/61 (44%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFF 86
            D      ++ S   +     Q++  ++YIHS N +HRD+KP N L+         +   
Sbjct: 92  EDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIID 151

Query: 87  F 87
           F
Sbjct: 152 F 152

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 42.4 bits (100), Expect = 4e-06
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHS--ANVLHRDLKPSNLLL 73
            T ++ +S +    F  Q+   L ++ +   +++H DLKP N+LL
Sbjct: 148 NTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 42.5 bits (100), Expect = 5e-06
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
                      ++  QI+ GL+++H  N+++RDLKP N+LL
Sbjct: 282 DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 42.4 bits (100), Expect = 5e-06
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
            D      +  S   +     Q++  ++Y+HS N+++RD+KP N L+
Sbjct: 92  EDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI 138

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
              +      D  C++L +I   L ++H   +++RDLKP N++LN
Sbjct: 111 QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           H  +  R    H  ++  +I  GL ++ S  +++RDLK  N++L++
Sbjct: 432 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS 477

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 42.0 bits (99), Expect = 6e-06
 Identities = 5/28 (17%), Positives = 16/28 (57%)

Query: 48  QILRGLKYIHSANVLHRDLKPSNLLLNT 75
           ++L  L+++H    +H ++   N+ ++ 
Sbjct: 167 RLLDALEFLHENEYVHGNVTAENIFVDP 194

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R     + + ++  +  QI +G+ Y+    ++HRDL   N+L+ T   +K
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 157

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 41.7 bits (98), Expect = 7e-06
 Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 8/56 (14%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSA--------NVLHRDLKPSNLLLNTTCDLK 80
               ++ + +         GL ++H           + HRDLK  N+L+       
Sbjct: 132 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 13/45 (28%), Positives = 28/45 (62%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
             +K    + + + ++L ++   L ++HS  +++RDLKP N+LL+
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 160

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
           +             ++  +I  GL+ +H   +++RDLKP N+LL
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 51  RGLKYIHSANVLHRDLKPSNLLL 73
            G+ ++H  + +HRD+K +N+LL
Sbjct: 144 NGINFLHENHHIHRDIKSANILL 166

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 41.2 bits (97), Expect = 9e-06
 Identities = 12/47 (25%), Positives = 24/47 (51%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
            D      ++ S   +     Q+L  ++ IH  ++++RD+KP N L+
Sbjct: 93  EDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 139

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           S R+Y   H+   +R+ +  +  +  QI +G++Y+ +   +HRDL   N+L+     +K
Sbjct: 99  SLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R     + + ++  +  QI +G+ Y+    ++HRDL   N+L+ T   +K
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 157

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           S R+Y   H+   +R+ +  +  +  QI +G++Y+ +   +HRDL   N+L+     +K
Sbjct: 130 SLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 185

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           S +EY   ++    +++      +  QI +G+ Y+ S   +HRDL   N+L+ +
Sbjct: 111 SLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 161

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           RT+  RL    +   +     G++Y+ S   +HRDL   N L+     LK
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLK 253

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R     L    +  +  QI +G+ Y+    ++HR+L   N+LL +   ++
Sbjct: 106 RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQ 155

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 12/24 (50%), Positives = 19/24 (79%)

Query: 51  RGLKYIHSANVLHRDLKPSNLLLN 74
           RGL Y+H+  ++HRD+K  N+LL+
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD 173

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             R++   HR    RL    +  +  QI +G++Y+ S   +HRDL   N+L+ +   +K
Sbjct: 112 CLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 167

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           R          +  +  Q+  G+ Y+ S   +HRDL   NLLL T
Sbjct: 112 RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 156

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 39.4 bits (92), Expect = 4e-05
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 9/57 (15%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSA---------NVLHRDLKPSNLLLNTTCDLK 80
                     C   + + RGL Y+H+           + HRDL   N+L+       
Sbjct: 104 SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 38.9 bits (91), Expect = 7e-05
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNT 75
           H ++ +  S D   ++  +I+  L Y+HS  NV++RDLK  NL+L+ 
Sbjct: 238 HLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 284

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
           S R+Y   H     +L       F  QI  G+ Y+H+ + +HRDL   N+LL+ 
Sbjct: 121 SLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN 169

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 38.8 bits (90), Expect = 8e-05
 Identities = 17/74 (22%), Positives = 35/74 (47%)

Query: 7   QITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDL 66
           Q +       ++SL    E           L+ +H+  + +Q+ +G++++ S   +HRDL
Sbjct: 160 QSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 219

Query: 67  KPSNLLLNTTCDLK 80
              N+LL+    +K
Sbjct: 220 AARNILLSEKNVVK 233

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
             K + +   ++   L+Q+  G+KY+   N +HRDL   N+LL  
Sbjct: 101 VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN 145

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 38.2 bits (89), Expect = 1e-04
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           Q +S   + Y   QI   ++Y+   N +HR+L   N L+     +K
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVK 358

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 15/48 (31%), Positives = 28/48 (58%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + + + + +I   ++Q+  G+KY+  +N +HRDL   N+LL T    K
Sbjct: 110 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAK 157

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + +   L    +  + YQ+   L Y+ S   +HRD+   N+L+++   +K
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK 156

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             K + +   ++   L+Q+  G+KY+   N +HR+L   N+LL      K
Sbjct: 427 VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAK 476

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 12/57 (21%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSA----------NVLHRDLKPSNLLL--NTTC 77
           K   +S + +C+    + RGL Y+H             + HRD+K  N+LL  N T 
Sbjct: 114 KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                 L    +  +  QI + + Y+ S N +HRD+   N+L+ +   +K
Sbjct: 104 ERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVK 153

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            +L+ + +     QI  G+ +I   N +HRDL+ +N+L++ T   K
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCK 149

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           Q +S   + Y   QI   ++Y+   N +HRDL   N L+ 
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           R    R     +      +   ++Y+ S   LHRDL   N L+N
Sbjct: 111 REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN 154

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           R+  + L    +    Y +  G+ ++ S   +HRDL   N L++    +K
Sbjct: 95  RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVK 144

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 36.8 bits (85), Expect = 4e-04
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
             R +    +     L    +  + YQ+   L Y+ S   +HRD+   N+L+++
Sbjct: 476 ELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 526

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 36.4 bits (84), Expect = 5e-04
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           + L    +     QI  G+ Y+   N +HRDL+ +N+L+      K
Sbjct: 358 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 403

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             L  D +  F   +   ++Y+   N +HRDL   N+L++     K
Sbjct: 284 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK 329

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
           RT   + +   +   L  +  G++Y+     +HRDL   N+L++
Sbjct: 142 RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD 185

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           RT+    + + +      +  G+ Y+  A V+HRDL   N L+     +K
Sbjct: 95  RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK 144

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +  +     +  F  QI  G+ +I   N +HRDL+ +N+L++ +   K
Sbjct: 277 EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK 324

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             L  D +  F   +   ++Y+   N +HRDL   N+L++     K
Sbjct: 112 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK 157

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 3/27 (11%)

Query: 51  RGLKYIH---SANVLHRDLKPSNLLLN 74
           RGL Y+H      ++HRD+K +N+LL+
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLD 168

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 36.0 bits (82), Expect = 8e-04
 Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 2/74 (2%)

Query: 27  SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKFFFYF 85
            D  + + +  S       L+Q+   L    ++    HRDL   N+LL  T   K   Y 
Sbjct: 148 IDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKK-LHYT 206

Query: 86  FFSFFFHFTVHDVT 99
                       + 
Sbjct: 207 LNGKSSTIPSCGLQ 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.92
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.92
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.91
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.9
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.9
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.9
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.89
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.89
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.89
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.88
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.88
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.87
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.85
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.83
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.82
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.81
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.81
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.81
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.81
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.81
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.8
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.8
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.8
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.8
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.8
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.8
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.8
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.8
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.79
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.79
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.79
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.79
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.79
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.79
3niz_A	311	Rhodanese family protein; structural genomics, str	99.79
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.78
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.78
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.78
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.78
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.78
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.78
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.78
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.78
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.78
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.77
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.77
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.77
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.77
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.77
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.77
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.77
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.77
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.77
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.77
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.77
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.77
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.76
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.76
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.76
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.76
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.76
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.76
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.76
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.76
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.76
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.76
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.76
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.76
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.76
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.76
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.76
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.76
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.75
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.75
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.75
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.75
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.75
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.75
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.75
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.75
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.75
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.75
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.75
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.75
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.74
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.74
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.74
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.74
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.74
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.74
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.74
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.74
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.74
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.74
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.74
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.74
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.74
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.74
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.74
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.74
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.74
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.74
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.74
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.74
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.74
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.74
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.73
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.73
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.73
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.73
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.73
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.73
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.73
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.73
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.73
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.73
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.73
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.73
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.73
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.73
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.73
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.73
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.73
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.73
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.73
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.73
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.73
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.73
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.72
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.72
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.72
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.72
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.72
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.72
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.72
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.72
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.72
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.72
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.72
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.72
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.72
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.72
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.72
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.72
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.72
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.72
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.72
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.72
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.72
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.71
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.71
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.71
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.71
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.71
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.71
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.71
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.71
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.71
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.71
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.71
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.71
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.71
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.71
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.71
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.71
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.7
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.7
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.7
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.7
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.7
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.7
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.7
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.7
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.7
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.7
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.7
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.7
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.7
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.7
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.7
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.7
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.7
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.7
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.7
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.7
3bhy_A	283	Death-associated protein kinase 3; death associate	99.7
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.69
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.69
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.69
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.69
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.69
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.69
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.69
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.69
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.69
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.69
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.69
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.69
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.69
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.69
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.69
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.69
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.68
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.68
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.68
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.68
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.68
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.68
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.68
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.68
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.68
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.68
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.68
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.68
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.68
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.67
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.67
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.67
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.67
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.67
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.66
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.66
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.66
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.65
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.65
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.65
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.65
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.65
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.65
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.65
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.64
3uqc_A	286	Probable conserved transmembrane protein; structur	99.64
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.64
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.64
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.63
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.63
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.63
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.62
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.62
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.61
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.61
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.6
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.59
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.55
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.55
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.53
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.32
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.02
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.35
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.16
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.08
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.8
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.7
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.23
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.92
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.73
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.81
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.32
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	94.14
3ats_A	357	Putative uncharacterized protein; hypothetical pro	94.04
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.92
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.36
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	92.75
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	92.72
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	92.46
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	91.95
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	91.84
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	91.43
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	91.23
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.76
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.66
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	87.41
3mes_A	424	Choline kinase; malaria, structural genomics, stru	87.37
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	86.83
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	80.51

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=8.1e-26  Score=140.53  Aligned_cols=92  Identities=21%  Similarity=0.287  Sum_probs=83.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||||+.++..+.+.+.++++||++....+     +.+.+++..+..++.|++.|+.|+|+++|+|||+||+|||++.+
T Consensus        89 l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~  168 (311)
T 4aw0_A           89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED  168 (311)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCC
Confidence            3699999999999999999999999765322     33689999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+|+.+.+.
T Consensus       169 g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          169 MHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             SCEEECCCTTCEECCTT
T ss_pred             CCEEEEEcCCceecCCC
Confidence            99999999999977544

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.93  E-value=1e-25  Score=141.81  Aligned_cols=91  Identities=19%  Similarity=0.295  Sum_probs=82.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||||.++..+.+.+.++++||++....    ...+++++..+..++.|++.|+.|+|+++|+|||+||+|||++.++.
T Consensus       129 ~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~  208 (346)
T 4fih_A          129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR  208 (346)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCC
Confidence            69999999999999999999999976532    23467999999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      +||+|||+|+.+...
T Consensus       209 vKl~DFGla~~~~~~  223 (346)
T 4fih_A          209 VKLSDFGFCAQVSKE  223 (346)
T ss_dssp             EEECCCTTCEECCSS
T ss_pred             EEEecCcCceecCCC
Confidence            999999999877554

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.92  E-value=2.5e-25  Score=138.05  Aligned_cols=90  Identities=19%  Similarity=0.284  Sum_probs=80.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .||||+.++..+.+.+.++++||++....+     +.+.+++..+..++.|++.|+.|+|+++|+|||+||+|||++.++
T Consensus        84 ~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g  163 (304)
T 3ubd_A           84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG  163 (304)
T ss_dssp             CCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS
T ss_pred             CCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC
Confidence            699999999999999999999999765322     336799999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .+||+|||+|+....
T Consensus       164 ~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          164 HIKLTDFGLSKESID  178 (304)
T ss_dssp             CEEEESSEEEEC---
T ss_pred             CEEecccccceeccC
Confidence            999999999986544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=2.8e-25  Score=142.75  Aligned_cols=91  Identities=19%  Similarity=0.290  Sum_probs=82.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||||.++..|.+.+.++++||++....+    ..+++++..+..++.|++.|+.|+|+++|+|||+||+|||++.++.
T Consensus       206 ~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~  285 (423)
T 4fie_A          206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR  285 (423)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCC
T ss_pred             CCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCC
Confidence            699999999999999999999999765332    4467999999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      +||+|||+|+.+...
T Consensus       286 vKl~DFGla~~~~~~  300 (423)
T 4fie_A          286 VKLSDFGFCAQVSKE  300 (423)
T ss_dssp             EEECCCTTCEECCSS
T ss_pred             EEEecCccceECCCC
Confidence            999999999877554

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=4.2e-25  Score=135.43  Aligned_cols=91  Identities=24%  Similarity=0.380  Sum_probs=78.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+.+.+.++++||++.....    +.+++++..+..++.|++.|+.|+|+++|+|||+||+||+++.++.
T Consensus        71 ~HpnIv~~~~~~~~~~~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~  150 (275)
T 3hyh_A           71 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN  150 (275)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCC
Confidence            699999999999999999999999754322    3467999999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      +||+|||+|+.....
T Consensus       151 vkl~DFGla~~~~~~  165 (275)
T 3hyh_A          151 VKIADFGLSNIMTDG  165 (275)
T ss_dssp             EEECCSSCC------
T ss_pred             EEEeecCCCeecCCC
Confidence            999999999876543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.92  E-value=3.7e-25  Score=138.83  Aligned_cols=91  Identities=21%  Similarity=0.241  Sum_probs=80.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||||.++..+.+.+.++++||++....+     +.+.+++..+..++.|++.|+.|+|+++|+|||+||+|||++.++
T Consensus       108 ~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g  187 (336)
T 4g3f_A          108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG  187 (336)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC
Confidence            699999999999999999999999765322     336799999999999999999999999999999999999999887


Q ss_pred             -CeEEEeeceeccccCc
Q psy7276          78 -DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 -~~~i~dfgl~~~~~~~   93 (101)
                       .+||+|||+|+.+.++
T Consensus       188 ~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          188 SRAALCDFGHALCLQPD  204 (336)
T ss_dssp             CCEEECCCTTCEEC---
T ss_pred             CEEEEeeCCCCeEccCC
Confidence             5999999999877654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.92  E-value=2.8e-25  Score=139.97  Aligned_cols=91  Identities=21%  Similarity=0.269  Sum_probs=80.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||||.++..+.+.+.++++||++....+       ....+++..+..++.|++.|+.|+|+++|+|||+||+|||++.
T Consensus        81 ~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~  160 (350)
T 4b9d_A           81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK  160 (350)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECT
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC
Confidence            699999999999999999999999765322       1235789999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.+||+|||+|+.+...
T Consensus       161 ~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          161 DGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             TCCEEECSTTEESCCCHH
T ss_pred             CCCEEEcccccceeecCC
Confidence            999999999999876543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.91  E-value=3.4e-24  Score=132.78  Aligned_cols=92  Identities=18%  Similarity=0.197  Sum_probs=81.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK------------------YQRLSNDHICYFLYQILRGLKYIHSANVLHR   64 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~   64 (101)
                      .|||||.++..+.+++.+++++|++....+.                  ...+++..+..++.|++.|+.|+|+++|+||
T Consensus        73 ~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR  152 (299)
T 4asz_A           73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHR  152 (299)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            6999999999999999999999997543221                  1358999999999999999999999999999


Q ss_pred             cCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          65 DLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        65 ~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      |+||+|||++.++.+||+|||+|+......
T Consensus       153 DlKp~NILl~~~~~~Ki~DFGla~~~~~~~  182 (299)
T 4asz_A          153 DLATRNCLVGENLLVKIGDFGMSRDVYSTD  182 (299)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGG
T ss_pred             ccCHhhEEECCCCcEEECCcccceecCCCC
Confidence            999999999999999999999998765543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.90  E-value=5.9e-24  Score=133.17  Aligned_cols=91  Identities=18%  Similarity=0.148  Sum_probs=75.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc--------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCce
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK--------------------YQRLSNDHICYFLYQILRGLKYIHSANVL   62 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~   62 (101)
                      .|||||.++..+.+.+.+++++|++....+.                    .+++++..+..++.|++.|+.|+|+++|+
T Consensus       101 ~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ii  180 (329)
T 4aoj_A          101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFV  180 (329)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence            6999999999999999999999997543221                    14588999999999999999999999999


Q ss_pred             eccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          63 HRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        63 ~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      |||+||+|||++.++.+||+|||+++.....
T Consensus       181 HRDLKp~NILl~~~~~~Ki~DFGla~~~~~~  211 (329)
T 4aoj_A          181 HRDLATRNCLVGQGLVVKIGDFGMSRDIYST  211 (329)
T ss_dssp             CSCCCGGGEEEETTTEEEECCCC--------
T ss_pred             cccccHhhEEECCCCcEEEcccccceeccCC
Confidence            9999999999999999999999999876544

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.90  E-value=8.3e-24  Score=141.88  Aligned_cols=93  Identities=19%  Similarity=0.237  Sum_probs=83.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||||.++..|.+...++++||++....+     +.+.+++..+..++.|++.|+.|+|+++|+|||+||+|||++.+
T Consensus       249 ~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~  328 (689)
T 3v5w_A          249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH  328 (689)
T ss_dssp             SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT
T ss_pred             CCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCC
Confidence            3699999999999999999999999765322     34679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCcc
Q psy7276          77 CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~   94 (101)
                      |.+||+|||+|+.+....
T Consensus       329 G~vKL~DFGlA~~~~~~~  346 (689)
T 3v5w_A          329 GHVRISDLGLACDFSKKK  346 (689)
T ss_dssp             SCEEECCCTTCEECSSCC
T ss_pred             CCEEecccceeeecCCCC
Confidence            999999999998776543

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.90  E-value=1e-23  Score=130.97  Aligned_cols=89  Identities=17%  Similarity=0.273  Sum_probs=75.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||+|.++..+. .+.+++++|++....+      ....+++..+..++.|++.|+.|+|+++|+|||+||+|||++.+
T Consensus        90 ~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~  168 (307)
T 3omv_A           90 RHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEG  168 (307)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETT
T ss_pred             CCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCC
Confidence            6999999998664 5678999999765322      23568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.+||+|||+|+....
T Consensus       169 ~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          169 LTVKIGDFGLATVKSR  184 (307)
T ss_dssp             EEEEECCCSSCBC---
T ss_pred             CcEEEeeccCceeccc
Confidence            9999999999986543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.90  E-value=1.9e-23  Score=129.86  Aligned_cols=92  Identities=18%  Similarity=0.248  Sum_probs=80.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCc
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSANV   61 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i   61 (101)
                      .|||||.+++.+.+.+.+++++|++....+                     ....+++..+..++.|++.|+.|+|++++
T Consensus        87 ~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i  166 (308)
T 4gt4_A           87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV  166 (308)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            699999999999999999999999654221                     01358899999999999999999999999


Q ss_pred             eeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          62 LHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        62 ~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      +|||+||+|||++.++.+||+|||+++......
T Consensus       167 iHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~  199 (308)
T 4gt4_A          167 VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD  199 (308)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCSCCBCGGGGGG
T ss_pred             CCCCccccceEECCCCCEEECCcccceeccCCC
Confidence            999999999999999999999999998765543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.89  E-value=2e-23  Score=129.29  Aligned_cols=91  Identities=18%  Similarity=0.168  Sum_probs=71.2

Q ss_pred             cccceeEEEEEeeCCC------------ceEEEeeccccccc----c-c---cCCCHHHHHHHHHHHHHHHHHHHHCCce
Q psy7276           3 FHQDQITIEIRHSTKE------------SLVSFREYSDSHRT----K-Y---QRLSNDHICYFLYQILRGLKYIHSANVL   62 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------------~l~~~~~~~~~~~~----~-~---~~~~~~~~~~~~~~i~~~l~~~h~~~i~   62 (101)
                      .|||||.++..+...+            .++++||++....+    . .   ...++..+..++.|++.|+.|+|+++|+
T Consensus        61 ~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~Ii  140 (299)
T 4g31_A           61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLM  140 (299)
T ss_dssp             CCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCc
Confidence            6999999999887543            37899998754322    1 1   2245566888999999999999999999


Q ss_pred             eccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          63 HRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        63 ~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      |||+||+|||++.++.+||+|||+|+.+...
T Consensus       141 HRDlKp~NILl~~~~~vKl~DFGla~~~~~~  171 (299)
T 4g31_A          141 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD  171 (299)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCCCC------
T ss_pred             cccCcHHHeEECCCCcEEEccCccceecCCC
Confidence            9999999999999999999999999877654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.89  E-value=3.3e-23  Score=127.86  Aligned_cols=90  Identities=21%  Similarity=0.305  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeC----CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHST----KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~ni   71 (101)
                      .|||||.++..+..    ...++++||++....+     +.+.+++..+..++.|++.|+.|+|+++  |+|||+||+||
T Consensus        83 ~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NI  162 (290)
T 3fpq_A           83 QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI  162 (290)
T ss_dssp             CCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGE
T ss_pred             CCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhhe
Confidence            69999999998864    3558899999765332     3367899999999999999999999998  99999999999


Q ss_pred             EEee-CCCeEEEeeceeccccC
Q psy7276          72 LLNT-TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        72 l~~~-~~~~~i~dfgl~~~~~~   92 (101)
                      |++. ++.+||+|||+|+....
T Consensus       163 Ll~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          163 FITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EESSTTSCEEECCTTGGGGCCT
T ss_pred             eEECCCCCEEEEeCcCCEeCCC
Confidence            9974 78999999999985443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.89  E-value=2.8e-23  Score=131.45  Aligned_cols=91  Identities=20%  Similarity=0.293  Sum_probs=80.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-CC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-CD   78 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-~~   78 (101)
                      ..|||++.++..+...+.++++||++....+..  +.+++..+..++.|++.|+.|+|+++|+|||+||+|||++.+ +.
T Consensus        77 ~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~  156 (361)
T 4f9c_A           77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK  156 (361)
T ss_dssp             CSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE
T ss_pred             cCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCe
Confidence            469999999999999999999999976432211  568999999999999999999999999999999999999876 78


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      +||+|||+|+....
T Consensus       157 ~kl~DFGla~~~~~  170 (361)
T 4f9c_A          157 YALVDFGLAQGTHD  170 (361)
T ss_dssp             EEECCCTTCEECTT
T ss_pred             EEECcCCCCcccCC
Confidence            99999999986544

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.88  E-value=2.4e-22  Score=128.58  Aligned_cols=90  Identities=41%  Similarity=0.591  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeC------CCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHST------KESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~------~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||||.++..+..      .+.++++||++.....    ..+.+++..+..++.|++.|+.|+|+++|+|||+||+|||
T Consensus       111 ~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl  190 (398)
T 4b99_A          111 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL  190 (398)
T ss_dssp             CCTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEE
T ss_pred             CCCCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccc
Confidence            69999999988753      4678999999764322    3467999999999999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceeccccC
Q psy7276          73 LNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++.+||+|||+|+.+..
T Consensus       191 ~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          191 VNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             ECTTCCEEECCCTTCBCC--
T ss_pred             cCCCCCEEEeecceeeeccc
Confidence            99999999999999986543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.88  E-value=1.6e-22  Score=134.10  Aligned_cols=89  Identities=12%  Similarity=0.069  Sum_probs=76.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      +.|+|++.++..+++.+.++++||++.+..+     ..+++++.   .++.|++.|+.|+|++||+|||+||+|||++.+
T Consensus       299 ~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~d  375 (569)
T 4azs_A          299 PAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDAR  375 (569)
T ss_dssp             CTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTT
T ss_pred             CCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCC
Confidence            5799999999999999999999999765433     23556654   478999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+++.....
T Consensus       376 g~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          376 QHARLIDFGSIVTTPQD  392 (569)
T ss_dssp             SCEEECCCTTEESCC--
T ss_pred             CCEEEeecccCeeCCCC
Confidence            99999999999866543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.87  E-value=1.8e-22  Score=125.16  Aligned_cols=91  Identities=14%  Similarity=0.142  Sum_probs=78.2

Q ss_pred             cccceeEEEEEeeCCC----ceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccC
Q psy7276           3 FHQDQITIEIRHSTKE----SLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSA--------NVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~----~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~--------~i~~~~l   66 (101)
                      .|||++.++..+...+    .+++++|++....    .....++++....++.+++.|+.|+|++        +|+|||+
T Consensus        55 ~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDl  134 (303)
T 3hmm_A           55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL  134 (303)
T ss_dssp             CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCC
T ss_pred             CCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccC
Confidence            6999999999887543    5789999976432    2346788999999999999999999987        8999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ||+|||++.++.+||+|||+|+.....
T Consensus       135 Kp~NILl~~~~~~Ki~DFGla~~~~~~  161 (303)
T 3hmm_A          135 KSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CcccEEECCCCCEEEEeCCCCccccCC
Confidence            999999999999999999999876554

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.87  E-value=2.8e-22  Score=126.56  Aligned_cols=92  Identities=17%  Similarity=0.306  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeC-CCceEEEeecccccccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           3 FHQDQITIEIRHST-KESLVSFREYSDSHRTK---------------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      -|||||.++..+.. ++.+++++|++....+.                     ...+++..+..++.|++.|+.|+|+++
T Consensus       126 hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~  205 (353)
T 4ase_A          126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  205 (353)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC
Confidence            35999999998865 56789999997542221                     133788999999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      ++|||+||+|||++.++.+||+|||+|+....+.
T Consensus       206 iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~  239 (353)
T 4ase_A          206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  239 (353)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT
T ss_pred             eecCccCccceeeCCCCCEEECcchhhhhcccCC
Confidence            9999999999999999999999999998765543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.85  E-value=1.9e-21  Score=129.08  Aligned_cols=92  Identities=21%  Similarity=0.345  Sum_probs=81.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .||||+.++..+.+...++++||++....+      ..+.+++..+..++.|++.|+.|||+++|+|||+||+|||++.+
T Consensus       212 ~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~  291 (573)
T 3uto_A          212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK  291 (573)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC
Confidence            699999999999999999999999754322      23568999999999999999999999999999999999999854


Q ss_pred             --CCeEEEeeceeccccCcc
Q psy7276          77 --CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 --~~~~i~dfgl~~~~~~~~   94 (101)
                        +.+||+|||+|+.+.+..
T Consensus       292 ~~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          292 RSNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             SCCCEEECCCSSCEECCTTS
T ss_pred             CCCCEEEeeccceeEccCCC
Confidence              789999999999876653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.83  E-value=4.1e-20  Score=116.59  Aligned_cols=90  Identities=19%  Similarity=0.242  Sum_probs=80.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+...+.+++++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        81 ~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~  160 (353)
T 3txo_A           81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE  160 (353)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             cCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCC
Confidence            3699999999999999999999998754322     33679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||+++...
T Consensus       161 g~ikL~DFG~a~~~~  175 (353)
T 3txo_A          161 GHCKLADFGMCKEGI  175 (353)
T ss_dssp             SCEEECCCTTCBCSC
T ss_pred             CCEEEccccceeecc
Confidence            999999999988543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.82  E-value=8.1e-20  Score=116.84  Aligned_cols=88  Identities=23%  Similarity=0.348  Sum_probs=79.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+.+.++++++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus       110 ~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~  189 (396)
T 4dc2_A          110 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE  189 (396)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCC
Confidence            3699999999999999999999999754322     33679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecc
Q psy7276          77 CDLKFFFYFFFSF   89 (101)
Q Consensus        77 ~~~~i~dfgl~~~   89 (101)
                      +.++|+|||+++.
T Consensus       190 g~ikL~DFGla~~  202 (396)
T 4dc2_A          190 GHIKLTDYGMCKE  202 (396)
T ss_dssp             SCEEECCCTTCBC
T ss_pred             CCEEEeecceeee
Confidence            9999999999885

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.81  E-value=1.6e-19  Score=113.51  Aligned_cols=89  Identities=22%  Similarity=0.324  Sum_probs=79.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+...+.++.++++.....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        67 ~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  146 (345)
T 3a8x_A           67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE  146 (345)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC
Confidence            4799999999999999999999998654222     23579999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       147 g~~kL~DFG~a~~~  160 (345)
T 3a8x_A          147 GHIKLTDYGMCKEG  160 (345)
T ss_dssp             SCEEECCGGGCBCS
T ss_pred             CCEEEEeccccccc
Confidence            99999999998853

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.81  E-value=1.2e-19  Score=117.34  Aligned_cols=92  Identities=17%  Similarity=0.279  Sum_probs=80.9

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+.+.+.+++++|++....+     . .+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.
T Consensus       131 ~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~  210 (437)
T 4aw2_A          131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM  210 (437)
T ss_dssp             SCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcC
Confidence            3699999999999999999999998644221     1 356899999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.+||+|||+++.....
T Consensus       211 ~g~vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          211 NGHIRLADFGSCLKLMED  228 (437)
T ss_dssp             TSCEEECCCTTCEECCTT
T ss_pred             CCCEEEcchhhhhhcccC
Confidence            999999999998766543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.81  E-value=1.7e-19  Score=112.73  Aligned_cols=91  Identities=24%  Similarity=0.319  Sum_probs=80.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        72 ~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~  151 (328)
T 3fe3_A           72 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM  151 (328)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC
Confidence            599999999999999999999998654222     236789999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||++..+...
T Consensus       152 ~~kl~DFG~a~~~~~~  167 (328)
T 3fe3_A          152 NIKIADFGFSNEFTVG  167 (328)
T ss_dssp             CEEECSTTCCGGGSSS
T ss_pred             CEEEeeccCceecCCC
Confidence            9999999999866544

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.81  E-value=1.2e-19  Score=116.44  Aligned_cols=92  Identities=18%  Similarity=0.204  Sum_probs=81.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..|||++.++..+.+...+++++|++...    ......+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       126 l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g  205 (410)
T 3v8s_A          126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG  205 (410)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCC
Confidence            36999999999999999999999987442    22335789999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||+++.....
T Consensus       206 ~ikL~DFG~a~~~~~~  221 (410)
T 3v8s_A          206 HLKLADFGTCMKMNKE  221 (410)
T ss_dssp             CEEECCCTTCEECCTT
T ss_pred             CEEEeccceeEeeccC
Confidence            9999999999866543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.81  E-value=1.9e-19  Score=113.26  Aligned_cols=88  Identities=23%  Similarity=0.312  Sum_probs=79.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.+.+.++.++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        76 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  155 (345)
T 1xjd_A           76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG  155 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC
Confidence            699999999999999999999998754222     236789999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       156 ~vkL~DFG~a~~~  168 (345)
T 1xjd_A          156 HIKIADFGMCKEN  168 (345)
T ss_dssp             CEEECCCTTCBCC
T ss_pred             CEEEeEChhhhhc
Confidence            9999999998854

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.80  E-value=2.4e-19  Score=112.50  Aligned_cols=88  Identities=20%  Similarity=0.314  Sum_probs=79.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++.++|+.....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        63 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  142 (337)
T 1o6l_A           63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG  142 (337)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCC
Confidence            699999999999999999999999754322     335689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       143 ~vkL~DFG~a~~~  155 (337)
T 1o6l_A          143 HIKITDFGLCKEG  155 (337)
T ss_dssp             CEEECCCTTCBCS
T ss_pred             CEEEeeccchhhc
Confidence            9999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.80  E-value=2.7e-19  Score=112.89  Aligned_cols=89  Identities=20%  Similarity=0.274  Sum_probs=79.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.+...+...+.+++++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        78 ~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~  157 (353)
T 2i0e_A           78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE  157 (353)
T ss_dssp             TCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCC
Confidence            4699999999999999999999998754222     23679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       158 g~vkL~DFG~a~~~  171 (353)
T 2i0e_A          158 GHIKIADFGMCKEN  171 (353)
T ss_dssp             SCEEECCCTTCBCC
T ss_pred             CcEEEEeCCccccc
Confidence            99999999998853

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.80  E-value=2.6e-19  Score=113.71  Aligned_cols=89  Identities=20%  Similarity=0.295  Sum_probs=79.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+...+.+++++|++....+     ..+.+++..+..++.+++.|+.|+|+++++|+|+||+||+++.+
T Consensus        96 ~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~  175 (373)
T 2r5t_A           96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ  175 (373)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             CCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC
Confidence            4699999999999999999999999654322     33568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       176 g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          176 GHIVLTDFGLCKEN  189 (373)
T ss_dssp             SCEEECCCCBCGGG
T ss_pred             CCEEEeeCcccccc
Confidence            99999999998863

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.80  E-value=2.6e-19  Score=114.15  Aligned_cols=90  Identities=14%  Similarity=0.304  Sum_probs=80.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.+++++....+     ..+.+++..+..++.+++.|+.|+|+++++|+|+||+||+++.++
T Consensus        73 ~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g  152 (384)
T 4fr4_A           73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG  152 (384)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC
Confidence            699999999999999999999998754322     335689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++..+..
T Consensus       153 ~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A          153 HVHITDFNIAAMLPR  167 (384)
T ss_dssp             CEEECCCTTCEECCT
T ss_pred             CEEEeccceeeeccC
Confidence            999999999986544

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.80  E-value=3.2e-19  Score=111.90  Aligned_cols=91  Identities=26%  Similarity=0.370  Sum_probs=81.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+...+.++.++|+......    ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++.
T Consensus        67 ~hpnIv~l~~~~~~~~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~  146 (336)
T 3h4j_B           67 RHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLN  146 (336)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCC
T ss_pred             CCCCCCeEEEEEEeCCEEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCC
Confidence            699999999999999999999998754322    2367899999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      ++|+|||++......
T Consensus       147 ~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B          147 VKIADFGLSNIMTDG  161 (336)
T ss_dssp             EEECCSSCTBTTTTS
T ss_pred             EEEEEeccceeccCC
Confidence            999999998866544

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.80  E-value=4.5e-19  Score=112.31  Aligned_cols=92  Identities=21%  Similarity=0.332  Sum_probs=79.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      +.|||++.++..+...+.++.++++.....+    .                 ...+++..+..++.|++.|+.|+|+++
T Consensus       144 ~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  223 (370)
T 2psq_A          144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  223 (370)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999998654211    1                 124788899999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ++|+|+||+||+++.++.++|+|||+++.....
T Consensus       224 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  256 (370)
T 2psq_A          224 CIHRDLAARNVLVTENNVMKIADFGLARDINNI  256 (370)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCSSCEETTCC
T ss_pred             eeccccchhhEEECCCCCEEEccccCCcccCcc
Confidence            999999999999999999999999999865543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.80  E-value=3.4e-19  Score=109.84  Aligned_cols=91  Identities=20%  Similarity=0.240  Sum_probs=80.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+...+.++.++|++....+    ....+++..+..++.+++.|+.|+|+++++|+|++|+||+++.++.
T Consensus        75 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~  154 (297)
T 3fxz_A           75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS  154 (297)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred             CCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCC
Confidence            699999999999999999999998644222    3356899999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      ++|+|||++....+.
T Consensus       155 ~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A          155 VKLTDFGFCAQITPE  169 (297)
T ss_dssp             EEECCCTTCEECCST
T ss_pred             EEEeeCCCceecCCc
Confidence            999999998766543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.80  E-value=4.8e-19  Score=119.41  Aligned_cols=89  Identities=20%  Similarity=0.274  Sum_probs=79.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..||+++.+...+.+.+.+++++|+.....+     ..+.+++..+..++.|++.|+.|+|+++|+|+|+||+|||++.+
T Consensus       399 ~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~  478 (674)
T 3pfq_A          399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE  478 (674)
T ss_dssp             TCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSS
T ss_pred             cCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCC
Confidence            4689999999999999999999998654222     33679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||+++..
T Consensus       479 g~ikL~DFGla~~~  492 (674)
T 3pfq_A          479 GHIKIADFGMCKEN  492 (674)
T ss_dssp             SCEEECCCTTCEEC
T ss_pred             CcEEEeecceeecc
Confidence            99999999998853

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.79  E-value=3.7e-19  Score=114.27  Aligned_cols=92  Identities=18%  Similarity=0.248  Sum_probs=80.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----c-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----K-YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+.+.+.+++++|+.....+     . ...+++..+..++.+++.|+.|+|+++++|+|+||+||+++.
T Consensus       118 ~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~  197 (412)
T 2vd5_A          118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR  197 (412)
T ss_dssp             SCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             cCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecC
Confidence            3699999999999999999999998643211     1 136899999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||+++.....
T Consensus       198 ~g~vkL~DFGla~~~~~~  215 (412)
T 2vd5_A          198 CGHIRLADFGSCLKLRAD  215 (412)
T ss_dssp             TSCEEECCCTTCEECCTT
T ss_pred             CCCEEEeechhheeccCC
Confidence            999999999999876543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.79  E-value=4.6e-19  Score=108.70  Aligned_cols=89  Identities=33%  Similarity=0.476  Sum_probs=80.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++|++.....     ..+.+++..+..++.|++.|+.++|+++++|+|+||+||+++.++
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~  138 (292)
T 3o0g_A           59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            599999999999999999999998765332     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       139 ~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A          139 ELKLANFGLARAFG  152 (292)
T ss_dssp             CEEECCCTTCEECC
T ss_pred             CEEEeecccceecC
Confidence            99999999987654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.79  E-value=4.6e-19  Score=110.40  Aligned_cols=91  Identities=23%  Similarity=0.355  Sum_probs=80.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+...++.++|++....+     ..+.+++..+..++.+++.|+.++|+++++|+|++|+||+++.+
T Consensus        63 l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  142 (318)
T 1fot_A           63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN  142 (318)
T ss_dssp             CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT
T ss_pred             CCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCC
Confidence            3699999999999999999999998654222     23568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||+++....
T Consensus       143 g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A          143 GHIKITDFGFAKYVPD  158 (318)
T ss_dssp             SCEEECCCSSCEECSS
T ss_pred             CCEEEeecCcceecCC
Confidence            9999999999886543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.79  E-value=6e-19  Score=111.14  Aligned_cols=90  Identities=23%  Similarity=0.346  Sum_probs=80.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++++++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        99 ~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  178 (350)
T 1rdq_E           99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG  178 (350)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC
Confidence            699999999999999999999998653222     235789999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||+++....
T Consensus       179 ~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          179 YIQVTDFGFAKRVKG  193 (350)
T ss_dssp             CEEECCCTTCEECSS
T ss_pred             CEEEcccccceeccC
Confidence            999999999886544

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.79  E-value=4.1e-19  Score=110.01  Aligned_cols=91  Identities=20%  Similarity=0.189  Sum_probs=79.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+..++.++.+++++.....     ....+++..+..++.+++.|+.|+|+.+++|+|+||+||+++.+
T Consensus       114 ~~h~~iv~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  193 (311)
T 3p1a_A          114 GQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR  193 (311)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGG
T ss_pred             cCCCcEEEEEEEEEeCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC
Confidence            3699999999999999999999998754322     12458999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||++.....
T Consensus       194 ~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          194 GRCKLGDFGLLVELGT  209 (311)
T ss_dssp             GCEEECCCTTCEECC-
T ss_pred             CCEEEccceeeeeccc
Confidence            9999999999876543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.79  E-value=7.3e-19  Score=108.95  Aligned_cols=89  Identities=29%  Similarity=0.440  Sum_probs=79.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.+++++.....     ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        77 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~  156 (311)
T 3niz_A           77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG  156 (311)
T ss_dssp             CCTTBCCEEEEECCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CCCCEeeeeeEEccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC
Confidence            599999999999999999999998764322     224588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||+++...
T Consensus       157 ~~kl~Dfg~a~~~~  170 (311)
T 3niz_A          157 ALKLADFGLARAFG  170 (311)
T ss_dssp             CEEECCCTTCEETT
T ss_pred             CEEEccCcCceecC
Confidence            99999999988654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.78  E-value=1e-18  Score=108.97  Aligned_cols=88  Identities=23%  Similarity=0.311  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus        79 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~  158 (327)
T 3a62_A           79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG  158 (327)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS
T ss_pred             CCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC
Confidence            599999999999999999999998754222     235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccc
Q psy7276          78 DLKFFFYFFFSFF   90 (101)
Q Consensus        78 ~~~i~dfgl~~~~   90 (101)
                      .++|+|||+++..
T Consensus       159 ~~kl~Dfg~~~~~  171 (327)
T 3a62_A          159 HVKLTDFGLCKES  171 (327)
T ss_dssp             CEEECCCSCC---
T ss_pred             cEEEEeCCccccc
Confidence            9999999998754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.78  E-value=5.1e-19  Score=114.46  Aligned_cols=89  Identities=33%  Similarity=0.424  Sum_probs=77.1

Q ss_pred             cccceeEEEEEeeC-----CCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHST-----KESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+..     ...+++++++......    ....+++..+..++.|++.|+.|+|+.+++|+|+||+|||+
T Consensus       110 ~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl  189 (458)
T 3rp9_A          110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV  189 (458)
T ss_dssp             CCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE
T ss_pred             CCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE
Confidence            69999999999843     3678999998654322    22568999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++|+|||+++...
T Consensus       190 ~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          190 NQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             CTTCCEEECCCTTCBCTT
T ss_pred             CCCCCEeecccccchhcc
Confidence            999999999999998765

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.78  E-value=7.2e-19  Score=108.19  Aligned_cols=90  Identities=27%  Similarity=0.375  Sum_probs=79.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.+++.|+.++|+++++|+|++|+||+++.++
T Consensus        69 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~  148 (294)
T 4eqm_A           69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK  148 (294)
T ss_dssp             CBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            599999999999999999999998654222     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++.....
T Consensus       149 ~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A          149 TLKIFDFGIAKALSE  163 (294)
T ss_dssp             CEEECCCSSSTTC--
T ss_pred             CEEEEeCCCcccccc
Confidence            999999999886544

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.78  E-value=9e-19  Score=111.26  Aligned_cols=89  Identities=28%  Similarity=0.484  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...  ..++++++++.....   ....+++.....++.|++.|+.|+|+.+++|+|+||+||+++.++
T Consensus        67 ~h~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~  146 (388)
T 3oz6_A           67 GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC  146 (388)
T ss_dssp             TCTTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CCCCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCC
Confidence            599999999998643  478999998764322   335688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||+++.+.
T Consensus       147 ~~kl~DFG~a~~~~  160 (388)
T 3oz6_A          147 HVKVADFGLSRSFV  160 (388)
T ss_dssp             CEEECCCTTCEESS
T ss_pred             CEEecCCccccccc
Confidence            99999999998654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.78  E-value=1.8e-18  Score=111.96  Aligned_cols=91  Identities=20%  Similarity=0.163  Sum_probs=79.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee--
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~--   75 (101)
                      .|||++.++..+...+.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.  
T Consensus        68 ~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~  147 (444)
T 3soa_A           68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL  147 (444)
T ss_dssp             CBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS
T ss_pred             CCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC
Confidence            699999999999999999999999754322     2356899999999999999999999999999999999999984  


Q ss_pred             -CCCeEEEeeceeccccCc
Q psy7276          76 -TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 -~~~~~i~dfgl~~~~~~~   93 (101)
                       ++.++|+|||++......
T Consensus       148 ~~~~vkL~DFG~a~~~~~~  166 (444)
T 3soa_A          148 KGAAVKLADFGLAIEVEGE  166 (444)
T ss_dssp             TTCCEEECCCSSCBCCCTT
T ss_pred             CCCcEEEccCceeEEecCC
Confidence             477999999999866543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.78  E-value=8.5e-19  Score=113.21  Aligned_cols=89  Identities=25%  Similarity=0.332  Sum_probs=79.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+...+.+++++|+.....+     ....+++..+..++.|++.|+.|+|+ .+++|+|+||+||+++.
T Consensus       205 l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~  284 (446)
T 4ejn_A          205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK  284 (446)
T ss_dssp             CSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECS
T ss_pred             CCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECC
Confidence            3699999999999999999999998754322     23568999999999999999999998 99999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++|+|||+++..
T Consensus       285 ~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          285 DGHIKITDFGLCKEG  299 (446)
T ss_dssp             SSCEEECCCCCCCTT
T ss_pred             CCCEEEccCCCceec
Confidence            999999999998754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.78  E-value=1.4e-18  Score=108.22  Aligned_cols=89  Identities=24%  Similarity=0.358  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++|++....+     ....+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus        63 ~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~  142 (323)
T 3tki_A           63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD  142 (323)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC
Confidence            699999999999999999999998754222     224689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++..+.
T Consensus       143 ~~kl~Dfg~a~~~~  156 (323)
T 3tki_A          143 NLKISDFGLATVFR  156 (323)
T ss_dssp             CEEECCCTTCEECE
T ss_pred             CEEEEEeeccceec
Confidence            99999999987553

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.78  E-value=1.4e-18  Score=109.53  Aligned_cols=89  Identities=15%  Similarity=0.174  Sum_probs=78.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|+|++.++..+...+..++++|++....+          ....+++..+..++.|++.|+.|+|+++++|+|+||+||+
T Consensus       125 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIl  204 (365)
T 3e7e_A          125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFI  204 (365)
T ss_dssp             GGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEE
T ss_pred             hhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEE
Confidence            489999999999999999999998653211          2356899999999999999999999999999999999999


Q ss_pred             Eee-----------CCCeEEEeeceecccc
Q psy7276          73 LNT-----------TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        73 ~~~-----------~~~~~i~dfgl~~~~~   91 (101)
                      ++.           ++.++|+|||+++.+.
T Consensus       205 l~~~~~~~~~~~~~~~~~kl~DFG~a~~~~  234 (365)
T 3e7e_A          205 LGNGFLEQDDEDDLSAGLALIDLGQSIDMK  234 (365)
T ss_dssp             ECGGGTCC------CTTEEECCCTTCEEGG
T ss_pred             ecccccCccccccccCCEEEeeCchhhhhh
Confidence            988           7899999999997543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.78  E-value=2.2e-18  Score=105.99  Aligned_cols=90  Identities=22%  Similarity=0.398  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+..  .+.++.++|+.....+    ....+++..+..++.|++.|+.|+|+++++|+|++|+||+++.+
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  173 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED  173 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC
Confidence            59999999999876  5678899998654322    33568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||++.....
T Consensus       174 ~~~kl~Dfg~~~~~~~  189 (298)
T 2zv2_A          174 GHIKIADFGVSNEFKG  189 (298)
T ss_dssp             SCEEECCCTTCEECSS
T ss_pred             CCEEEecCCCcccccc
Confidence            9999999999876544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.77  E-value=1.6e-18  Score=107.03  Aligned_cols=90  Identities=19%  Similarity=0.238  Sum_probs=79.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ....+++..+..++.|++.|+.|+|+++++|+|++|+||+++.+
T Consensus        65 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~  144 (310)
T 3s95_A           65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVREN  144 (310)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTT
T ss_pred             CCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCC
Confidence            699999999999999999999998654322      13568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||++..+..
T Consensus       145 ~~~kl~Dfg~~~~~~~  160 (310)
T 3s95_A          145 KNVVVADFGLARLMVD  160 (310)
T ss_dssp             SCEEECCCTTCEECC-
T ss_pred             CCEEEeecccceeccc
Confidence            9999999999876543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.77  E-value=1.5e-18  Score=109.74  Aligned_cols=91  Identities=24%  Similarity=0.354  Sum_probs=79.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++++++++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus        73 ~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~  152 (361)
T 2yab_A           73 LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (361)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             CCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC
Confidence            599999999999999999999998753222     235689999999999999999999999999999999999998776


Q ss_pred             ----CeEEEeeceeccccCc
Q psy7276          78 ----DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ----~~~i~dfgl~~~~~~~   93 (101)
                          .++|+|||++......
T Consensus       153 ~~~~~vkl~DFG~a~~~~~~  172 (361)
T 2yab_A          153 IPIPHIKLIDFGLAHEIEDG  172 (361)
T ss_dssp             SSSCCEEECCCSSCEECCTT
T ss_pred             CCccCEEEEecCCceEcCCC
Confidence                7999999999876553

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=1.2e-18  Score=108.46  Aligned_cols=91  Identities=20%  Similarity=0.300  Sum_probs=79.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      .|||++.++..+...+.++.++|++....+    .  ...+++..+..++.|++.|+.|+|+.+++|+|++|+||+++. 
T Consensus        59 ~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~  138 (321)
T 1tki_A           59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR  138 (321)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS
T ss_pred             CCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC
Confidence            599999999999999999999998754222    1  135899999999999999999999999999999999999987 


Q ss_pred             -CCCeEEEeeceeccccCc
Q psy7276          76 -TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 -~~~~~i~dfgl~~~~~~~   93 (101)
                       ++.++|+|||++..+.++
T Consensus       139 ~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A          139 RSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             SCCCEEECCCTTCEECCTT
T ss_pred             CCCCEEEEECCCCeECCCC
Confidence             688999999999876554

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.77  E-value=2e-18  Score=109.55  Aligned_cols=91  Identities=24%  Similarity=0.376  Sum_probs=79.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      +.|||++.++..+...+.++.+++++....+    .                 ...+++..+..++.+++.|+.++|+.+
T Consensus       132 ~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  211 (382)
T 3tt0_A          132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  211 (382)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3799999999999999999999998654211    1                 134889999999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++|+|+||+||+++.++.++|+|||+++....
T Consensus       212 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~  243 (382)
T 3tt0_A          212 CIHRDLAARNVLVTEDNVMKIADFGLARDIHH  243 (382)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECSCSCCCCSSC
T ss_pred             EecCCCCcceEEEcCCCcEEEcccCccccccc
Confidence            99999999999999999999999999986654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.77  E-value=1.5e-18  Score=108.20  Aligned_cols=91  Identities=20%  Similarity=0.291  Sum_probs=77.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+......+.++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus        64 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~  143 (325)
T 3kn6_A           64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN  143 (325)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC--
T ss_pred             CCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC
Confidence            599999999999999999999998654222     235689999999999999999999999999999999999998765


Q ss_pred             ---CeEEEeeceeccccCc
Q psy7276          78 ---DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ---~~~i~dfgl~~~~~~~   93 (101)
                         .++|+|||+++...+.
T Consensus       144 ~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A          144 DNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             --CEEEECCCTTCEECCC-
T ss_pred             CcccEEEeccccceecCCC
Confidence               7999999998765443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.77  E-value=1.2e-18  Score=108.63  Aligned_cols=91  Identities=16%  Similarity=0.180  Sum_probs=79.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus       108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  187 (325)
T 3kul_A          108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN  187 (325)
T ss_dssp             CCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCC
Confidence            599999999999999999999998654222      22468999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||+++.....
T Consensus       188 ~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          188 LVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             CCEEECCCSSCEECC--
T ss_pred             CCEEECCCCcccccccC
Confidence            99999999998876543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.77  E-value=1.7e-18  Score=112.91  Aligned_cols=91  Identities=29%  Similarity=0.349  Sum_probs=80.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++|++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.++
T Consensus        74 ~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~  153 (476)
T 2y94_A           74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM  153 (476)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC
Confidence            699999999999999999999998743222     335689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||++.....+
T Consensus       154 ~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A          154 NAKIADFGLSNMMSDG  169 (476)
T ss_dssp             CEEECCCSSCEECCTT
T ss_pred             CeEEEeccchhhcccc
Confidence            9999999998876543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.77  E-value=1.2e-18  Score=106.68  Aligned_cols=89  Identities=34%  Similarity=0.369  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++......     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  137 (288)
T 1ob3_A           58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG  137 (288)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCCCEeeeeeEEccCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            599999999999999999999998654322     125688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       138 ~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A          138 ELKIADFGLARAFG  151 (288)
T ss_dssp             CEEECCTTHHHHHC
T ss_pred             CEEEeECccccccC
Confidence            99999999987654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.77  E-value=2.3e-18  Score=113.81  Aligned_cols=91  Identities=19%  Similarity=0.244  Sum_probs=80.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+.....++.++++.....+     .    ...+++..+..++.|++.|+.|+|+++++|+|+||+||++
T Consensus       243 ~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl  322 (543)
T 3c4z_A          243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL  322 (543)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE
Confidence            599999999999999999999998654222     1    2358999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccCc
Q psy7276          74 NTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +.++.++|+|||+++.+...
T Consensus       323 ~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          323 DDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             CTTSCEEECCCTTCEECCTT
T ss_pred             eCCCCEEEeecceeeeccCC
Confidence            99999999999999876544

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.77  E-value=1.7e-18  Score=108.95  Aligned_cols=91  Identities=24%  Similarity=0.236  Sum_probs=80.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++|++.....     ....+++..+..++.+++.|+.|+|+++++|+|++|+||+++.++
T Consensus       112 ~hpniv~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  191 (348)
T 1u5q_A          112 RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG  191 (348)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             CCCCEeeEEEEEEECCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            599999999999999999999999754322     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||++....+.
T Consensus       192 ~~kL~DfG~a~~~~~~  207 (348)
T 1u5q_A          192 LVKLGDFGSASIMAPA  207 (348)
T ss_dssp             EEEECCCTTCBSSSSB
T ss_pred             CEEEeeccCceecCCC
Confidence            9999999998866543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.77  E-value=2.4e-18  Score=107.44  Aligned_cols=76  Identities=21%  Similarity=0.174  Sum_probs=64.9

Q ss_pred             CCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCCeEEeeCC--------------
Q psy7276          17 KESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTC--------------   77 (101)
Q Consensus        17 ~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h-~~~i~~~~lk~~nil~~~~~--------------   77 (101)
                      .+.+++++|++...    ......+++..+..++.|++.|+.|+| +.+++|||+||+|||++.++              
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~  213 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSST  213 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEE
T ss_pred             cCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcccc
Confidence            67889999985332    223356899999999999999999999 99999999999999999887              


Q ss_pred             ------CeEEEeeceeccccC
Q psy7276          78 ------DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ------~~~i~dfgl~~~~~~   92 (101)
                            .+||+|||+++....
T Consensus       214 ~~~~~~~vkL~DFG~a~~~~~  234 (336)
T 2vuw_A          214 IPSCGLQVSIIDYTLSRLERD  234 (336)
T ss_dssp             EECTTEEEEECCCTTCBEEET
T ss_pred             ccCCCceEEEeeccccEecCC
Confidence                  899999999987654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.77  E-value=2e-18  Score=114.66  Aligned_cols=91  Identities=16%  Similarity=0.211  Sum_probs=80.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+.+.+.+++++++.....+     .  ...+++..+..++.|++.|+.|+|+++++|+|+||+||+++.
T Consensus       242 ~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~  321 (576)
T 2acx_A          242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD  321 (576)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeC
Confidence            699999999999999999999998653222     1  134899999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||+++....+
T Consensus       322 ~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          322 HGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             TSCEEECCCTTCEECCTT
T ss_pred             CCCeEEEecccceecccC
Confidence            999999999999876543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.76  E-value=3.6e-18  Score=106.04  Aligned_cols=89  Identities=31%  Similarity=0.446  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc----------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK----------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+...+.++.++|++......          ...+++..+..++.|++.|+.|+|+++++|+|+||+||+
T Consensus        61 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl  140 (317)
T 2pmi_A           61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLL  140 (317)
T ss_dssp             CBTTBCCEEEEECCTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             CCCCcceEEEEEEECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeE
Confidence            6999999999999999999999986543211          134788999999999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceecccc
Q psy7276          73 LNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++.++.++|+|||+++...
T Consensus       141 ~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A          141 INKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             ECTTCCEEECCCSSCEETT
T ss_pred             EcCCCCEEECcCccceecC
Confidence            9999999999999987654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=2.7e-18  Score=108.15  Aligned_cols=90  Identities=17%  Similarity=0.269  Sum_probs=79.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+...+.++++++++....+     ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       117 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  196 (355)
T 1vzo_A          117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG  196 (355)
T ss_dssp             TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            589999999999999999999998654222     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||+++.+..
T Consensus       197 ~~kl~DfG~a~~~~~  211 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVA  211 (355)
T ss_dssp             CEEESCSSEEEECCG
T ss_pred             cEEEeeCCCCeeccc
Confidence            999999999986543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.76  E-value=5e-18  Score=106.64  Aligned_cols=92  Identities=23%  Similarity=0.326  Sum_probs=78.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccc-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHR-----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.....++.++|++....     ...+.+++..+..++.+++.|+.|+|+++++|+|+||+||++..+
T Consensus        73 ~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~  152 (342)
T 2qr7_A           73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDE  152 (342)
T ss_dssp             TTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSS
T ss_pred             cCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecC
Confidence            469999999999999999999999875422     233568999999999999999999999999999999999998543


Q ss_pred             -C---CeEEEeeceeccccCc
Q psy7276          77 -C---DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 -~---~~~i~dfgl~~~~~~~   93 (101)
                       +   .++|+|||+++.....
T Consensus       153 ~~~~~~~kl~Dfg~a~~~~~~  173 (342)
T 2qr7_A          153 SGNPESIRICDFGFAKQLRAE  173 (342)
T ss_dssp             SCSGGGEEECCCTTCEECBCT
T ss_pred             CCCcCeEEEEECCCcccCcCC
Confidence             3   4999999998866543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.76  E-value=3.3e-18  Score=108.47  Aligned_cols=90  Identities=18%  Similarity=0.156  Sum_probs=78.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++|+.....+      ....+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.+
T Consensus       170 ~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~  249 (377)
T 3cbl_A          170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK  249 (377)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCC
Confidence            699999999999999999999998653221      12358899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||+++....
T Consensus       250 ~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          250 NVLKISDFGMSREEAD  265 (377)
T ss_dssp             CCEEECCGGGCEECTT
T ss_pred             CcEEECcCCCceecCC
Confidence            9999999999876443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.76  E-value=4e-18  Score=107.24  Aligned_cols=91  Identities=23%  Similarity=0.243  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+.+++++|++....+         ....+++..+..++.|++.|+.|+|+++++|+|+||+||++
T Consensus        84 ~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~  163 (351)
T 3c0i_A           84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL  163 (351)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEE
Confidence            699999999999999999999998754222         11248899999999999999999999999999999999999


Q ss_pred             eeCCC---eEEEeeceeccccCc
Q psy7276          74 NTTCD---LKFFFYFFFSFFFHF   93 (101)
Q Consensus        74 ~~~~~---~~i~dfgl~~~~~~~   93 (101)
                      +.++.   ++|+|||++......
T Consensus       164 ~~~~~~~~vkl~Dfg~a~~~~~~  186 (351)
T 3c0i_A          164 ASKENSAPVKLGGFGVAIQLGES  186 (351)
T ss_dssp             CSSSTTCCEEECCCTTCEECCTT
T ss_pred             ecCCCCCcEEEecCcceeEecCC
Confidence            87654   999999998876543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.76  E-value=4.5e-18  Score=107.50  Aligned_cols=91  Identities=20%  Similarity=0.215  Sum_probs=78.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.+++++....+     ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        86 ~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  165 (362)
T 2bdw_A           86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA  165 (362)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS
T ss_pred             CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence            699999999999999999999998654322     235689999999999999999999999999999999999998654


Q ss_pred             ---CeEEEeeceeccccCc
Q psy7276          78 ---DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ---~~~i~dfgl~~~~~~~   93 (101)
                         .++|+|||++......
T Consensus       166 ~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          166 KGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             TTCCEEECCCTTCBCCTTC
T ss_pred             CCCCEEEeecCcceEecCC
Confidence               5999999998866543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.76  E-value=4.7e-18  Score=106.39  Aligned_cols=91  Identities=16%  Similarity=0.246  Sum_probs=79.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc------cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH------RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++....      ......+++..+..++.+++.|+.|+|.++++|+|+||+||+++.+
T Consensus        87 ~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  166 (335)
T 3dls_A           87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED  166 (335)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCC
Confidence            6999999999999999999999975332      1123468999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||++......
T Consensus       167 ~~~kL~Dfg~a~~~~~~  183 (335)
T 3dls_A          167 FTIKLIDFGSAAYLERG  183 (335)
T ss_dssp             SCEEECCCTTCEECCTT
T ss_pred             CcEEEeecccceECCCC
Confidence            99999999998876544

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.76  E-value=4e-18  Score=106.04  Aligned_cols=90  Identities=17%  Similarity=0.183  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+. .+..+.++++.....+      ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.+
T Consensus        73 ~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~  151 (325)
T 3kex_A           73 DHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSP  151 (325)
T ss_dssp             CCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSS
T ss_pred             CCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCC
Confidence            6999999998775 5667788887543211      12468889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||+++.+...
T Consensus       152 ~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A          152 SQVQVADFGVADLLPPD  168 (325)
T ss_dssp             SCEEECSCSGGGGSCCC
T ss_pred             CeEEECCCCcccccCcc
Confidence            99999999999876544

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.76  E-value=2.5e-18  Score=110.74  Aligned_cols=91  Identities=29%  Similarity=0.361  Sum_probs=77.3

Q ss_pred             cccceeEEEEEeeCC-----CceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTK-----ESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...     ..++.++++......    ....+++..+..++.|++.|+.|+|+.+++|+|+||+||++
T Consensus        83 ~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl  162 (432)
T 3n9x_A           83 KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL  162 (432)
T ss_dssp             CCTTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCCCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE
Confidence            599999999998766     578999998654322    22458999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccCc
Q psy7276          74 NTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +.++.++|+|||+++.....
T Consensus       163 ~~~~~~kL~DFGla~~~~~~  182 (432)
T 3n9x_A          163 NQDCSVKVCDFGLARTINSE  182 (432)
T ss_dssp             CTTCCEEECCCTTCEEC---
T ss_pred             CCCCCEEEccCCCccccccc
Confidence            99999999999999876543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.76  E-value=2.5e-18  Score=108.46  Aligned_cols=91  Identities=21%  Similarity=0.136  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCC----CceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTK----ESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~----~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...    ..++++++++.....     ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||++
T Consensus       106 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill  185 (364)
T 3op5_A          106 KYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL  185 (364)
T ss_dssp             SCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             cCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEE
Confidence            599999999888764    447888988632221     12568999999999999999999999999999999999999


Q ss_pred             e--eCCCeEEEeeceeccccCc
Q psy7276          74 N--TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        74 ~--~~~~~~i~dfgl~~~~~~~   93 (101)
                      +  .++.++|+|||+++.+...
T Consensus       186 ~~~~~~~~kl~DFG~a~~~~~~  207 (364)
T 3op5_A          186 NYKNPDQVYLVDYGLAYRYCPE  207 (364)
T ss_dssp             ESSCTTCEEECCCTTCEESSGG
T ss_pred             ecCCCCeEEEEECCcceecccC
Confidence            9  7889999999999776544

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.76  E-value=3.6e-18  Score=107.88  Aligned_cols=88  Identities=28%  Similarity=0.377  Sum_probs=75.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        74 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~  153 (361)
T 3uc3_A           74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP  153 (361)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSS
T ss_pred             CCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            599999999999999999999998754222     235799999999999999999999999999999999999998766


Q ss_pred             C--eEEEeeceeccc
Q psy7276          78 D--LKFFFYFFFSFF   90 (101)
Q Consensus        78 ~--~~i~dfgl~~~~   90 (101)
                      .  ++|+|||+++..
T Consensus       154 ~~~~kl~Dfg~a~~~  168 (361)
T 3uc3_A          154 APRLKICDFGYSKSS  168 (361)
T ss_dssp             SCCEEECCCCCC---
T ss_pred             CceEEEeecCccccc
Confidence            5  999999998743

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.76  E-value=4.1e-18  Score=106.03  Aligned_cols=90  Identities=22%  Similarity=0.318  Sum_probs=79.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+...+.++.++|+....    ......+++..+..++.+++.|+.|+|+.+++|+|++|+||+++.++.
T Consensus       100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~  179 (321)
T 2c30_A          100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR  179 (321)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred             CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCc
Confidence            6999999999999999999999986443    223356899999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      ++|+|||++.....
T Consensus       180 ~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          180 VKLSDFGFCAQISK  193 (321)
T ss_dssp             EEECCCTTCEECCS
T ss_pred             EEEeeeeeeeeccc
Confidence            99999999876544

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.76  E-value=3e-18  Score=108.66  Aligned_cols=91  Identities=20%  Similarity=0.235  Sum_probs=73.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.+++++|+.....+      ....+++..+..++.+++.|+.|+|+.+++|+|+||+||+++.+
T Consensus       104 ~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  183 (373)
T 2qol_A          104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN  183 (373)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             CCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCC
Confidence            699999999999999999999998653222      12358899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||+++.....
T Consensus       184 ~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          184 LVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             CCEEECCC---------
T ss_pred             CCEEECcCccccccccC
Confidence            99999999998876543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.76  E-value=1.3e-18  Score=113.01  Aligned_cols=91  Identities=29%  Similarity=0.484  Sum_probs=74.3

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...+      .+++++|+.......  ...+++..+..++.|++.|+.|+|+.+++|+|+||+||+++
T Consensus       119 ~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~  198 (464)
T 3ttj_A          119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  198 (464)
T ss_dssp             CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             CCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe
Confidence            6999999999986553      468999986654322  24588999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||+++.....
T Consensus       199 ~~~~~kl~DFG~a~~~~~~  217 (464)
T 3ttj_A          199 SDCTLKILDFGLARTAGTS  217 (464)
T ss_dssp             TTSCEEECCCCCC-----C
T ss_pred             CCCCEEEEEEEeeeecCCC
Confidence            9999999999999866543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.76  E-value=5e-18  Score=105.84  Aligned_cols=90  Identities=26%  Similarity=0.342  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.+++++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus        72 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  151 (326)
T 2y0a_A           72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN  151 (326)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC
Confidence            599999999999999999999998654222     235689999999999999999999999999999999999998877


Q ss_pred             ----CeEEEeeceeccccC
Q psy7276          78 ----DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ----~~~i~dfgl~~~~~~   92 (101)
                          .++|+|||++.....
T Consensus       152 ~~~~~~kl~Dfg~a~~~~~  170 (326)
T 2y0a_A          152 VPKPRIKIIDFGLAHKIDF  170 (326)
T ss_dssp             SSSCCEEECCCTTCEECCT
T ss_pred             CCCCCEEEEECCCCeECCC
Confidence                799999999887653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.75  E-value=5.4e-18  Score=105.51  Aligned_cols=89  Identities=35%  Similarity=0.466  Sum_probs=78.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.......     ...+++..+..++.+++.|+.|+|+.+++|+|++|+||+++.++
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~  137 (324)
T 3mtl_A           58 KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG  137 (324)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTC
T ss_pred             CCCCCCeeeeEEeeCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCC
Confidence            5999999999999999999999987643221     24588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       138 ~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A          138 ELKLADFGLARAKS  151 (324)
T ss_dssp             CEEECSSSEEECC-
T ss_pred             CEEEccCccccccc
Confidence            99999999987544

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.75  E-value=4.5e-18  Score=103.21  Aligned_cols=91  Identities=15%  Similarity=0.200  Sum_probs=79.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~  142 (269)
T 4hcu_A           63 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN  142 (269)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG
T ss_pred             CCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCC
Confidence            599999999999999999999998654322      22458899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||++......
T Consensus       143 ~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A          143 QVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             GCEEECCTTGGGGBCCH
T ss_pred             CCEEecccccccccccc
Confidence            99999999998865443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.75  E-value=3.7e-18  Score=108.39  Aligned_cols=88  Identities=17%  Similarity=0.229  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.++.+++++....+       ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.
T Consensus        84 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~  163 (389)
T 3gni_B           84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV  163 (389)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            599999999999999999999998654222       1256889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccc
Q psy7276          76 TCDLKFFFYFFFSFF   90 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~   90 (101)
                      ++.++|+|||.+...
T Consensus       164 ~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          164 DGKVYLSGLRSNLSM  178 (389)
T ss_dssp             TCCEEECCGGGCEEC
T ss_pred             CCCEEEcccccceee
Confidence            999999999976543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.75  E-value=3.7e-18  Score=108.86  Aligned_cols=92  Identities=28%  Similarity=0.358  Sum_probs=76.6

Q ss_pred             CcccceeEEEEEeeCCCc------eEEEeeccccccc--------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           2 GFHQDQITIEIRHSTKES------LVSFREYSDSHRT--------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~------l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      ..|||++.++..+...+.      ++.+++++.....        ....+++..+..++.|++.|+.|+|+.+++|+|+|
T Consensus        89 l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  168 (394)
T 4e7w_A           89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIK  168 (394)
T ss_dssp             CCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence            369999999988865443      7788998654321        13568899999999999999999999999999999


Q ss_pred             CCCeEEe-eCCCeEEEeeceeccccCc
Q psy7276          68 PSNLLLN-TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        68 ~~nil~~-~~~~~~i~dfgl~~~~~~~   93 (101)
                      |+||+++ .++.++|+|||+++.+...
T Consensus       169 p~Nill~~~~~~~kL~DFG~a~~~~~~  195 (394)
T 4e7w_A          169 PQNLLLDPPSGVLKLIDFGSAKILIAG  195 (394)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             HHHEEEcCCCCcEEEeeCCCcccccCC
Confidence            9999999 7889999999999865443

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.75  E-value=3e-18  Score=106.89  Aligned_cols=90  Identities=16%  Similarity=0.171  Sum_probs=78.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c-------------------------ccCCCHHHHHHHHHHHHHHH
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K-------------------------YQRLSNDHICYFLYQILRGL   53 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-------------------------~~~~~~~~~~~~~~~i~~~l   53 (101)
                      .|||++.++..+...+.++.++++.....+    .                         ...+++..+..++.+++.|+
T Consensus       108 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l  187 (343)
T 1luf_A          108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM  187 (343)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence            699999999999999999999998643211    1                         14588899999999999999


Q ss_pred             HHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          54 KYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        54 ~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      .++|+++++|+|++|+||+++.++.++|+|||+++....
T Consensus       188 ~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  226 (343)
T 1luf_A          188 AYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS  226 (343)
T ss_dssp             HHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred             HHHHhCCeecCCCCcceEEECCCCeEEEeecCCCccccc
Confidence            999999999999999999999999999999999876543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.75  E-value=7.2e-18  Score=102.17  Aligned_cols=91  Identities=16%  Similarity=0.225  Sum_probs=79.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~  140 (268)
T 3sxs_A           61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD  140 (268)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTT
T ss_pred             CCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCC
Confidence            599999999999999999999998654322      12358999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||++......
T Consensus       141 ~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A          141 LCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             CCEEECCTTCEEECCTT
T ss_pred             CCEEEccCccceecchh
Confidence            99999999998865443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=3.6e-18  Score=107.08  Aligned_cols=90  Identities=28%  Similarity=0.392  Sum_probs=79.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++......     ....+++..+..++.+++.|+.|+|+.+++|+|++|+||+++.++
T Consensus        70 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  149 (346)
T 1ua2_A           70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG  149 (346)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCCCCCeEEEEEeeCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC
Confidence            599999999999999999999998665322     123578889999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||+++....
T Consensus       150 ~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A          150 VLKLADFGLAKSFGS  164 (346)
T ss_dssp             CEEECCCGGGSTTTS
T ss_pred             CEEEEecccceeccC
Confidence            999999999886543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.75  E-value=3.1e-18  Score=109.51  Aligned_cols=91  Identities=23%  Similarity=0.269  Sum_probs=75.2

Q ss_pred             CcccceeEEEEEeeC----CCceEEEeeccccccc----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           2 GFHQDQITIEIRHST----KESLVSFREYSDSHRT----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      ..|||++.++..+..    ...+++++|++....+    .   ...+++..+..++.+++.|+.|+|+.+++|+|+||+|
T Consensus       112 ~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  191 (400)
T 1nxk_A          112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  191 (400)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             cCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcce
Confidence            369999999988765    6678899998654221    1   1358999999999999999999999999999999999


Q ss_pred             eEEee---CCCeEEEeeceeccccC
Q psy7276          71 LLLNT---TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        71 il~~~---~~~~~i~dfgl~~~~~~   92 (101)
                      |+++.   ++.++|+|||+++....
T Consensus       192 ill~~~~~~~~~kl~DFG~a~~~~~  216 (400)
T 1nxk_A          192 LLYTSKRPNAILKLTDFGFAKETTS  216 (400)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECC-
T ss_pred             EEEecCCCCccEEEEecccccccCC
Confidence            99987   67899999999886543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.75  E-value=5.4e-18  Score=104.60  Aligned_cols=89  Identities=21%  Similarity=0.335  Sum_probs=79.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.+++++.....     ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~  139 (311)
T 4agu_A           60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS  139 (311)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC
Confidence            599999999999999999999998665322     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       140 ~~kl~Dfg~~~~~~  153 (311)
T 4agu_A          140 VIKLCDFGFARLLT  153 (311)
T ss_dssp             CEEECCCTTCEECC
T ss_pred             CEEEeeCCCchhcc
Confidence            99999999987655

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.75  E-value=5.9e-18  Score=105.42  Aligned_cols=91  Identities=15%  Similarity=0.234  Sum_probs=79.0

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+......+.++++......   .  .+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.+
T Consensus        62 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~  141 (330)
T 2izr_A           62 GSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP  141 (330)
T ss_dssp             CSCTTSCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG
T ss_pred             hCCCCCCEEEEEEecCCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccC
Confidence            4799999999999999999999998733221   1  3568999999999999999999999999999999999999988


Q ss_pred             CC-----eEEEeeceeccccC
Q psy7276          77 CD-----LKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~-----~~i~dfgl~~~~~~   92 (101)
                      +.     ++|+|||+++.+..
T Consensus       142 ~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A          142 GNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             GGTCTTSEEECCCTTCEESBC
T ss_pred             CCCCCceEEEEEcccceeeec
Confidence            76     99999999986544

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.75  E-value=6.4e-18  Score=110.49  Aligned_cols=90  Identities=17%  Similarity=0.209  Sum_probs=79.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.+++++|+.....+       ....+++..+..++.|++.|+.|+|+++++|+|++|+||+++.
T Consensus       274 ~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~  353 (495)
T 1opk_A          274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE  353 (495)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred             CCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECC
Confidence            599999999999999999999998653211       1245788999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.+||+|||+++....
T Consensus       354 ~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          354 NHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             GGCEEECCTTCEECCTT
T ss_pred             CCcEEEeecccceeccC
Confidence            99999999999987644

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.75  E-value=1.1e-17  Score=103.21  Aligned_cols=90  Identities=23%  Similarity=0.339  Sum_probs=75.4

Q ss_pred             cccceeEEEEEeeCCC-----ceEEEeeccccccc---c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTKE-----SLVSFREYSDSHRT---K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+....     .++.++++......   .   ...+++..+..++.|++.|+.|+|+++++|+|+||+||
T Consensus        72 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Ni  151 (308)
T 3g33_A           72 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI  151 (308)
T ss_dssp             CCTTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTE
T ss_pred             CCCCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence            4999999999887654     36788887554222   1   12389999999999999999999999999999999999


Q ss_pred             EEeeCCCeEEEeeceeccccC
Q psy7276          72 LLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +++.++.++|+|||+++....
T Consensus       152 l~~~~~~~kl~Dfg~a~~~~~  172 (308)
T 3g33_A          152 LVTSGGTVKLADFGLARIYSY  172 (308)
T ss_dssp             EECTTSCEEECSCSCTTTSTT
T ss_pred             EEcCCCCEEEeeCccccccCC
Confidence            999999999999999876544

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.74  E-value=5.9e-18  Score=103.43  Aligned_cols=91  Identities=10%  Similarity=0.014  Sum_probs=78.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+..+.+++++....+      ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        70 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  149 (289)
T 4fvq_A           70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIRE  149 (289)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEEC
T ss_pred             CCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecC
Confidence            599999999999999999999998754222      11348899999999999999999999999999999999999988


Q ss_pred             CC--------eEEEeeceeccccCc
Q psy7276          77 CD--------LKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~--------~~i~dfgl~~~~~~~   93 (101)
                      +.        ++++|||++....+.
T Consensus       150 ~~~~~~~~~~~kl~Dfg~~~~~~~~  174 (289)
T 4fvq_A          150 EDRKTGNPPFIKLSDPGISITVLPK  174 (289)
T ss_dssp             CBGGGTBCCEEEECCCCSCTTTSCH
T ss_pred             CcccccccceeeeccCcccccccCc
Confidence            87        999999998765443

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.74  E-value=7.9e-18  Score=106.78  Aligned_cols=91  Identities=24%  Similarity=0.315  Sum_probs=78.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe--
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~--   74 (101)
                      .|||++.++..+...+.+++++|++....+      ....+++..+..++.|++.|+.|+|+.+++|+|+||+||++.  
T Consensus       144 ~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  223 (373)
T 2x4f_A          144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR  223 (373)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC
Confidence            699999999999999999999998754222      224588999999999999999999999999999999999984  


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||+++.+.+.
T Consensus       224 ~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          224 DAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             TTTEEEECCCSSCEECCTT
T ss_pred             CCCcEEEEeCCCceecCCc
Confidence            4568999999999876554

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=7e-18  Score=105.39  Aligned_cols=92  Identities=17%  Similarity=0.263  Sum_probs=78.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----cc------------------------cCCCHHHHHHHHHHHHHHH
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----KY------------------------QRLSNDHICYFLYQILRGL   53 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~------------------------~~~~~~~~~~~~~~i~~~l   53 (101)
                      +.|||++.++..+...+.++.+++++....+    ..                        ..+++..+..++.+++.|+
T Consensus       106 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  185 (344)
T 1rjb_A          106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM  185 (344)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHH
Confidence            3799999999999999999999998643211    10                        2368888999999999999


Q ss_pred             HHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          54 KYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        54 ~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++|+.+++|+|++|+||+++.++.++|+|||++......
T Consensus       186 ~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~  225 (344)
T 1rjb_A          186 EFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD  225 (344)
T ss_dssp             HHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGC
T ss_pred             HHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccC
Confidence            9999999999999999999999999999999998765443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.74  E-value=1.3e-17  Score=101.51  Aligned_cols=91  Identities=21%  Similarity=0.278  Sum_probs=79.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE---e
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---N   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~---~   74 (101)
                      .|||++.++..+...+..+.++++.....+     ....+++..+..++.+++.|+.++|+++++|+|++|+||++   +
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  143 (277)
T 3f3z_A           64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDS  143 (277)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS
T ss_pred             CCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCC
Confidence            699999999999999999999998654222     23568999999999999999999999999999999999999   6


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++..+.+.
T Consensus       144 ~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A          144 PDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             TTCCEEECCCTTCEECCTT
T ss_pred             CCCcEEEEecccceeccCc
Confidence            7788999999998766544

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.74  E-value=7.4e-18  Score=102.81  Aligned_cols=90  Identities=17%  Similarity=0.262  Sum_probs=79.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ....+++..+..++.+++.|+.++|+++++|+|++|+||+++.+
T Consensus        77 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~  156 (283)
T 3gen_A           77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ  156 (283)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTT
T ss_pred             CCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCC
Confidence            599999999999999999999998643211      12568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||++.....
T Consensus       157 ~~~kl~Dfg~~~~~~~  172 (283)
T 3gen_A          157 GVVKVSDFGLSRYVLD  172 (283)
T ss_dssp             SCEEECSTTGGGGBCC
T ss_pred             CCEEEccccccccccc
Confidence            9999999999886544

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.74  E-value=7.7e-18  Score=105.59  Aligned_cols=89  Identities=24%  Similarity=0.341  Sum_probs=76.0

Q ss_pred             cccceeEEEEEeeC--------CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           3 FHQDQITIEIRHST--------KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      .|||++.++..+..        .+.++.+++++.....     ....+++..+..++.|++.|+.++|+++++|+|+||+
T Consensus        74 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~  153 (351)
T 3mi9_A           74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAA  153 (351)
T ss_dssp             CCTTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             cCCCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHH
Confidence            59999999988876        4568899998764222     1246899999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceecccc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ||+++.++.++|+|||+++.+.
T Consensus       154 NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A          154 NVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             GEEECTTSCEEECCCTTCEECC
T ss_pred             HEEEcCCCCEEEccchhccccc
Confidence            9999999999999999987654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.74  E-value=9.4e-18  Score=102.24  Aligned_cols=89  Identities=22%  Similarity=0.342  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.....+     ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        67 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~  146 (279)
T 3fdn_A           67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG  146 (279)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTS
T ss_pred             CCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCC
Confidence            599999999999999999999998654222     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       147 ~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A          147 ELKIADFGWSVHAP  160 (279)
T ss_dssp             CEEECSCCEESCC-
T ss_pred             CEEEEeccccccCC
Confidence            99999999886543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.74  E-value=5e-18  Score=106.50  Aligned_cols=56  Identities=23%  Similarity=0.494  Sum_probs=52.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +++..+..++.|++.|+.|+|+++++|+|+||+||+++.++.++|+|||+++....
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  245 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK  245 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence            78889999999999999999999999999999999999999999999999886543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.74  E-value=4.6e-18  Score=105.20  Aligned_cols=90  Identities=16%  Similarity=0.240  Sum_probs=73.2

Q ss_pred             cccceeEEEEEeeCCCc----eEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKES----LVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~----l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+.....    .+.++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|++|+||++
T Consensus        70 ~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~  149 (311)
T 3ork_A           70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI  149 (311)
T ss_dssp             CCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE
Confidence            69999999988775544    3788998653222     23568999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++|+|||++..+..
T Consensus       150 ~~~~~~kl~Dfg~a~~~~~  168 (311)
T 3ork_A          150 SATNAVKVMDFGIARAIAD  168 (311)
T ss_dssp             ETTSCEEECCCSCC-----
T ss_pred             cCCCCEEEeeccCcccccc
Confidence            9999999999999876544

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.74  E-value=1.3e-17  Score=104.25  Aligned_cols=89  Identities=25%  Similarity=0.331  Sum_probs=79.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.+++++....+     ....+++..+..++.|++.|+.++|+++++|+|++|+||+++.++
T Consensus        99 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  178 (335)
T 2owb_A           99 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL  178 (335)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC
Confidence            699999999999999999999998654222     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       179 ~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          179 EVKIGDFGLATKVE  192 (335)
T ss_dssp             CEEECCCTTCEECC
T ss_pred             CEEEeeccCceecc
Confidence            99999999987654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.74  E-value=9e-18  Score=104.07  Aligned_cols=74  Identities=20%  Similarity=0.247  Sum_probs=61.0

Q ss_pred             eEEEeecccccccc--------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          20 LVSFREYSDSHRTK--------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        20 l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++.+++++....+.        .....+..+..++.|++.|+.|+|+++++|+|+||+||+++.++.++|+|||+++...
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  215 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD  215 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccc
Confidence            77888886542221        1234566788899999999999999999999999999999999999999999988765


Q ss_pred             Cc
Q psy7276          92 HF   93 (101)
Q Consensus        92 ~~   93 (101)
                      ..
T Consensus       216 ~~  217 (332)
T 3qd2_B          216 QD  217 (332)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.74  E-value=1.2e-17  Score=109.04  Aligned_cols=91  Identities=23%  Similarity=0.336  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-   76 (101)
                      .|||++.++..+...+.++.+++++....+     ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.. 
T Consensus        94 ~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  173 (494)
T 3lij_A           94 DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE  173 (494)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             CCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC
Confidence            699999999999999999999998754322     23578999999999999999999999999999999999999764 


Q ss_pred             --CCeEEEeeceeccccCc
Q psy7276          77 --CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 --~~~~i~dfgl~~~~~~~   93 (101)
                        +.++|+|||++..+...
T Consensus       174 ~~~~~kl~DfG~a~~~~~~  192 (494)
T 3lij_A          174 KDALIKIVDFGLSAVFENQ  192 (494)
T ss_dssp             TTCCEEECCCTTCEECBTT
T ss_pred             CCCcEEEEECCCCeECCCC
Confidence              45999999998876543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.74  E-value=9.9e-18  Score=103.61  Aligned_cols=90  Identities=17%  Similarity=0.205  Sum_probs=76.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+...+.++.++|++....+     ....+++..+..++.|++.|+.++|+++++|+|++|+||+++.+
T Consensus        68 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~  147 (316)
T 2ac3_A           68 QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP  147 (316)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCS
T ss_pred             cCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccC
Confidence            3699999999999999999999998753222     22568999999999999999999999999999999999999887


Q ss_pred             CC---eEEEeeceecccc
Q psy7276          77 CD---LKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~---~~i~dfgl~~~~~   91 (101)
                      +.   ++|+|||++....
T Consensus       148 ~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A          148 NQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             SSSCSEEECCTTCCC---
T ss_pred             CCcCceEEEEccCccccc
Confidence            65   9999999987553

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.74  E-value=8.6e-18  Score=103.66  Aligned_cols=90  Identities=21%  Similarity=0.319  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-----------------------------ccCCCHHHHHHHHHHHHHHH
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-----------------------------YQRLSNDHICYFLYQILRGL   53 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l   53 (101)
                      .|||++.++..+...+.++.+++++....+.                             ...+++..+..++.|++.|+
T Consensus        84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  163 (314)
T 2ivs_A           84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGM  163 (314)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHH
T ss_pred             CCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHH
Confidence            5999999999999999999999986532110                             12378889999999999999


Q ss_pred             HHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          54 KYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        54 ~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      .++|+++++|+|++|+||+++.++.++|+|||++.....
T Consensus       164 ~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~  202 (314)
T 2ivs_A          164 QYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE  202 (314)
T ss_dssp             HHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTT
T ss_pred             HHHHHCCCcccccchheEEEcCCCCEEEccccccccccc
Confidence            999999999999999999999999999999999876543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.74  E-value=8.4e-18  Score=102.62  Aligned_cols=90  Identities=16%  Similarity=0.195  Sum_probs=68.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+. .+..+.++++.....+      ....+++..+..++.+++.|+.++|+++++|+|++|+||+++.+
T Consensus        74 ~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  152 (281)
T 1mp8_A           74 DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN  152 (281)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             CCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC
Confidence            5999999998874 5567888998654222      12358899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||+++.....
T Consensus       153 ~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A          153 DCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             TEEEECC----------
T ss_pred             CCEEECccccccccCcc
Confidence            99999999998866543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.74  E-value=9.7e-18  Score=106.92  Aligned_cols=91  Identities=20%  Similarity=0.307  Sum_probs=78.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      .|||++.++..+.....++.++|++....+      ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++. 
T Consensus       106 ~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~  185 (387)
T 1kob_A          106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK  185 (387)
T ss_dssp             CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST
T ss_pred             CCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC
Confidence            699999999999999999999998654222      1235889999999999999999999999999999999999975 


Q ss_pred             -CCCeEEEeeceeccccCc
Q psy7276          76 -TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 -~~~~~i~dfgl~~~~~~~   93 (101)
                       .+.++|+|||+++.....
T Consensus       186 ~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          186 KASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             TCCCEEECCCTTCEECCTT
T ss_pred             CCCceEEEecccceecCCC
Confidence             467999999999876554

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.74  E-value=1.6e-17  Score=101.08  Aligned_cols=92  Identities=23%  Similarity=0.320  Sum_probs=77.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      ..|||++.++..+...+.++.++++.....+    .     ...+++..+..++.|++.|+.++|+++++|+|++|+||+
T Consensus        68 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl  147 (289)
T 1x8b_A           68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIF  147 (289)
T ss_dssp             CSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEE
Confidence            3799999999999999999999998654222    1     145899999999999999999999999999999999999


Q ss_pred             EeeC-------------------CCeEEEeeceeccccCc
Q psy7276          73 LNTT-------------------CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        73 ~~~~-------------------~~~~i~dfgl~~~~~~~   93 (101)
                      ++.+                   ..++++|||++......
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  187 (289)
T 1x8b_A          148 ISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP  187 (289)
T ss_dssp             EC--------------------CCCEEECCCTTCEETTCS
T ss_pred             EcCCCCCcccccccccccccCCceEEEEcccccccccCCc
Confidence            9844                   47999999988866543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.74  E-value=2.5e-17  Score=102.20  Aligned_cols=89  Identities=19%  Similarity=0.234  Sum_probs=77.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc---------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK---------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+.++.++++.....+.         ...+++.....++.+++.|+.++|+++++|+|++|+||++
T Consensus        93 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~  172 (321)
T 2qkw_B           93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL  172 (321)
T ss_dssp             CCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE
T ss_pred             CCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE
Confidence            6999999999999999999999986532221         1247889999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++|+|||+++...
T Consensus       173 ~~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          173 DENFVPKITDFGISKKGT  190 (321)
T ss_dssp             CTTCCEEECCCTTCEECS
T ss_pred             CCCCCEEEeecccccccc
Confidence            999999999999987543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.74  E-value=1e-17  Score=109.14  Aligned_cols=91  Identities=26%  Similarity=0.443  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee--
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~--   75 (101)
                      .|||++.++..+.....++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.  
T Consensus        79 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~  158 (486)
T 3mwu_A           79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE  158 (486)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence            699999999999999999999998754322     3367899999999999999999999999999999999999954  


Q ss_pred             -CCCeEEEeeceeccccCc
Q psy7276          76 -TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 -~~~~~i~dfgl~~~~~~~   93 (101)
                       ++.++|+|||++..+...
T Consensus       159 ~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A          159 KDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             TTCCEEECSCSCTTTBCCC
T ss_pred             CCCCEEEEECCcCeECCCC
Confidence             457999999998866544

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.74  E-value=5.9e-18  Score=103.39  Aligned_cols=92  Identities=23%  Similarity=0.237  Sum_probs=74.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc--------cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT--------KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil   72 (101)
                      ..|||++.++..+...+..+.++++......        ....+++..+..++.|++.|+.++|++ +++|+|++|+||+
T Consensus        63 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil  142 (290)
T 3fme_A           63 VDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL  142 (290)
T ss_dssp             CCCTTBCCEEEEEECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCE
T ss_pred             CCCCeEEEEeeeeeccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEE
Confidence            4699999999999999999999998754321        225689999999999999999999998 9999999999999


Q ss_pred             EeeCCCeEEEeeceeccccCc
Q psy7276          73 LNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++.++|+|||++......
T Consensus       143 ~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A          143 INALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             ECTTCCEEBCCC---------
T ss_pred             ECCCCCEEEeecCCccccccc
Confidence            999999999999998765443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.74  E-value=1.2e-17  Score=102.96  Aligned_cols=92  Identities=21%  Similarity=0.252  Sum_probs=79.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-------------------ccCCCHHHHHHHHHHHHHHHHHHHH
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-------------------YQRLSNDHICYFLYQILRGLKYIHS   58 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-------------------~~~~~~~~~~~~~~~i~~~l~~~h~   58 (101)
                      +.|||++.++..+...+..+.+++++....+    .                   ...+++..+..++.+++.|+.++|+
T Consensus        84 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  163 (313)
T 1t46_A           84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS  163 (313)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999998643211    1                   1137899999999999999999999


Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      .+++|+|++|+||+++.++.++|+|||++......
T Consensus       164 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  198 (313)
T 1t46_A          164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKND  198 (313)
T ss_dssp             TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSC
T ss_pred             CCeecCCCccceEEEcCCCCEEEcccccccccccc
Confidence            99999999999999999999999999998876554

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.74  E-value=9.7e-18  Score=104.46  Aligned_cols=90  Identities=14%  Similarity=0.146  Sum_probs=74.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+..+. .+.++++.....+      ....+++..+..++.+++.|+.|+|+++++|+|+||+||+++.+
T Consensus        75 ~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~  153 (327)
T 3poz_A           75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP  153 (327)
T ss_dssp             CBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred             CCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCC
Confidence            5999999999988765 5566665432211      23568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||+++.....
T Consensus       154 ~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A          154 QHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             TEEEECCTTHHHHHTTT
T ss_pred             CCEEEccCcceeEccCC
Confidence            99999999998866443

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.73  E-value=2.2e-17  Score=101.29  Aligned_cols=89  Identities=25%  Similarity=0.331  Sum_probs=79.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        73 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  152 (294)
T 2rku_A           73 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL  152 (294)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC
Confidence            699999999999999999999998654222     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       153 ~~kl~dfg~~~~~~  166 (294)
T 2rku_A          153 EVKIGDFGLATKVE  166 (294)
T ss_dssp             CEEECCCTTCEECC
T ss_pred             CEEEEeccCceecc
Confidence            99999999987654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.73  E-value=1.6e-17  Score=108.62  Aligned_cols=91  Identities=25%  Similarity=0.403  Sum_probs=79.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++++++++....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus       104 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  183 (504)
T 3q5i_A          104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN  183 (504)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTT
T ss_pred             CCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCC
Confidence            599999999999999999999999754322     236789999999999999999999999999999999999998775


Q ss_pred             ---CeEEEeeceeccccCc
Q psy7276          78 ---DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ---~~~i~dfgl~~~~~~~   93 (101)
                         .++|+|||++..+...
T Consensus       184 ~~~~~kl~Dfg~a~~~~~~  202 (504)
T 3q5i_A          184 SLLNIKIVDFGLSSFFSKD  202 (504)
T ss_dssp             CCSSEEECCCTTCEECCTT
T ss_pred             CCccEEEEECCCCEEcCCC
Confidence               6999999999876554

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=1.4e-17  Score=104.08  Aligned_cols=90  Identities=24%  Similarity=0.285  Sum_probs=75.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus       104 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~  183 (333)
T 1mqb_A          104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN  183 (333)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             CCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCC
Confidence            699999999999999999999998654222      22468899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||+++....
T Consensus       184 ~~~kl~Dfg~~~~~~~  199 (333)
T 1mqb_A          184 LVCKVSDFGLSRVLED  199 (333)
T ss_dssp             CCEEECCCCC------
T ss_pred             CcEEECCCCcchhhcc
Confidence            9999999999886654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.73  E-value=1.1e-17  Score=105.79  Aligned_cols=90  Identities=29%  Similarity=0.491  Sum_probs=73.8

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...+      .++.+++++......  ...+++..+..++.|++.|+.|+|+++++|+|+||+||+++
T Consensus        82 ~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~  161 (371)
T 2xrw_A           82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  161 (371)
T ss_dssp             CCTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCCCccceEEeeccccccccccceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence            6999999999987665      678999987654322  14588999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++|+|||+++....
T Consensus       162 ~~~~~kl~Dfg~a~~~~~  179 (371)
T 2xrw_A          162 SDCTLKILDFGLARTAGT  179 (371)
T ss_dssp             TTSCEEECCCCC------
T ss_pred             CCCCEEEEEeeccccccc
Confidence            999999999999876543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.73  E-value=8.6e-18  Score=109.35  Aligned_cols=91  Identities=23%  Similarity=0.354  Sum_probs=79.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe---
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~---   74 (101)
                      .|||++.++..+...+.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++   
T Consensus        84 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  163 (484)
T 3nyv_A           84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS  163 (484)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCC
Confidence            699999999999999999999998654322     336689999999999999999999999999999999999994   


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++..+...
T Consensus       164 ~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          164 KDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             TTCCEEECCTTHHHHBCCC
T ss_pred             CCCcEEEEeeeeeEEcccc
Confidence            5678999999998876544

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.73  E-value=1.2e-17  Score=104.69  Aligned_cols=90  Identities=17%  Similarity=0.090  Sum_probs=77.2

Q ss_pred             cccceeEEEEEeeC----CCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST----KESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+..    ...++++++++.....    ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++
T Consensus       106 ~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  185 (345)
T 2v62_A          106 DYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG  185 (345)
T ss_dssp             SCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             cccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEc
Confidence            69999999998877    7788899998732221    224689999999999999999999999999999999999999


Q ss_pred             eCC--CeEEEeeceeccccC
Q psy7276          75 TTC--DLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~--~~~i~dfgl~~~~~~   92 (101)
                      .++  .++|+|||+++.+..
T Consensus       186 ~~~~~~~kL~Dfg~a~~~~~  205 (345)
T 2v62_A          186 YKNPDQVYLADYGLSYRYCP  205 (345)
T ss_dssp             SSSTTSEEECCCTTCEESSG
T ss_pred             cCCCCcEEEEeCCCceeccc
Confidence            887  999999999976644

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.73  E-value=8e-18  Score=104.65  Aligned_cols=91  Identities=20%  Similarity=0.239  Sum_probs=77.4

Q ss_pred             cccceeEEEEEeeCCC----ceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHC----------Cceec
Q psy7276           3 FHQDQITIEIRHSTKE----SLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSA----------NVLHR   64 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~----~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~----------~i~~~   64 (101)
                      .|||++.++..+....    .++.+++++...    ......+++..+..++.|++.|+.|+|+.          +++|+
T Consensus        76 ~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~  155 (322)
T 3soc_A           76 KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHR  155 (322)
T ss_dssp             CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECS
T ss_pred             CCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeC
Confidence            5999999999887644    368899986542    22335689999999999999999999999          99999


Q ss_pred             cCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          65 DLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        65 ~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      |+||+||+++.++.++|+|||+++.+...
T Consensus       156 Dlkp~Nill~~~~~~kL~DFg~a~~~~~~  184 (322)
T 3soc_A          156 DIKSKNVLLKNNLTACIADFGLALKFEAG  184 (322)
T ss_dssp             CCSGGGEEECTTCCEEECCCTTCEEECTT
T ss_pred             CCChHhEEECCCCeEEEccCCcccccccc
Confidence            99999999999999999999999766543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.73  E-value=1.1e-17  Score=104.26  Aligned_cols=90  Identities=23%  Similarity=0.362  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++......     ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        82 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~  161 (331)
T 4aaa_A           82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG  161 (331)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC
Confidence            599999999999999999999998754322     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++..+..
T Consensus       162 ~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          162 VVKLCDFGFARTLAA  176 (331)
T ss_dssp             CEEECCCTTC-----
T ss_pred             cEEEEeCCCceeecC
Confidence            999999999876543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.73  E-value=1.5e-17  Score=104.52  Aligned_cols=90  Identities=19%  Similarity=0.305  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      .|||++.++..+...+.+++++++......      ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++. 
T Consensus        94 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  173 (360)
T 3llt_A           94 NNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDP  173 (360)
T ss_dssp             TGGGBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCT
T ss_pred             CCCCeecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccc
Confidence            499999999999999999999998643221      1134889999999999999999999999999999999999975 


Q ss_pred             ------------------------CCCeEEEeeceeccccC
Q psy7276          76 ------------------------TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ------------------------~~~~~i~dfgl~~~~~~   92 (101)
                                              ++.++|+|||++.....
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~  214 (360)
T 3llt_A          174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD  214 (360)
T ss_dssp             TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS
T ss_pred             cccccccchhcccccccccccccCCCCEEEEeccCceecCC
Confidence                                    67899999999875443

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.73  E-value=2.1e-17  Score=103.06  Aligned_cols=91  Identities=21%  Similarity=0.332  Sum_probs=78.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      +.|||++.++..+...+.++.++++.....+    .                 ...+++..+..++.+++.|+.++|+.+
T Consensus        98 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (334)
T 2pvf_A           98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  177 (334)
T ss_dssp             CCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3799999999999999999999998654211    1                 123788899999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++|+|++|+||+++.++.++|+|||++.....
T Consensus       178 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  209 (334)
T 2pvf_A          178 CIHRDLAARNVLVTENNVMKIADFGLARDINN  209 (334)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECTT
T ss_pred             eeCCCCccceEEEcCCCCEEEccccccccccc
Confidence            99999999999999999999999999876554

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.73  E-value=2.2e-17  Score=101.41  Aligned_cols=91  Identities=16%  Similarity=0.242  Sum_probs=77.1

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...  ..++.++++.....+      ....+++..+..++.+++.|+.++|+++++|+|++|+||+++
T Consensus        81 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~  160 (302)
T 4e5w_A           81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE  160 (302)
T ss_dssp             CCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             CCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc
Confidence            599999999988766  668889998644221      224689999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++......
T Consensus       161 ~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          161 SEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             ETTEEEECCCTTCEECCTT
T ss_pred             CCCCEEECcccccccccCC
Confidence            9999999999998876544

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.73  E-value=2.1e-17  Score=104.49  Aligned_cols=91  Identities=20%  Similarity=0.274  Sum_probs=80.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.....+     ....+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus       158 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~  237 (365)
T 2y7j_A          158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM  237 (365)
T ss_dssp             TCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            699999999999999999999998654322     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++|||++..+.+.
T Consensus       238 ~ikl~DfG~~~~~~~~  253 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPG  253 (365)
T ss_dssp             CEEECCCTTCEECCTT
T ss_pred             CEEEEecCcccccCCC
Confidence            9999999988766543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.73  E-value=2.9e-17  Score=102.34  Aligned_cols=91  Identities=24%  Similarity=0.358  Sum_probs=77.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.++.+++++....+       ....+++..+..++.|++.|+.++|+++++|+|++|+||+++.
T Consensus        87 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~  166 (327)
T 3lm5_A           87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSS  166 (327)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESC
T ss_pred             CCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEec
Confidence            579999999999999999999998654211       1256889999999999999999999999999999999999987


Q ss_pred             ---CCCeEEEeeceeccccCc
Q psy7276          76 ---TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ---~~~~~i~dfgl~~~~~~~   93 (101)
                         ++.++|+|||+++.....
T Consensus       167 ~~~~~~~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          167 IYPLGDIKIVDFGMSRKIGHA  187 (327)
T ss_dssp             BTTBCCEEECCGGGCEEC---
T ss_pred             CCCCCcEEEeeCccccccCCc
Confidence               689999999998866543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.73  E-value=6.3e-18  Score=106.91  Aligned_cols=88  Identities=16%  Similarity=0.076  Sum_probs=75.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c--------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K--------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      .|||++.++..+...+..+.+++++....+    .        ...+++..+..++.|++.|+.|+|+++++|+|+||+|
T Consensus       132 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  211 (367)
T 3l9p_A          132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN  211 (367)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             CCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhh
Confidence            699999999999999999999998644211    1        1348889999999999999999999999999999999


Q ss_pred             eEEeeCC---CeEEEeeceeccc
Q psy7276          71 LLLNTTC---DLKFFFYFFFSFF   90 (101)
Q Consensus        71 il~~~~~---~~~i~dfgl~~~~   90 (101)
                      |+++.++   .++|+|||+++..
T Consensus       212 Ill~~~~~~~~~kL~DFG~a~~~  234 (367)
T 3l9p_A          212 CLLTCPGPGRVAKIGDFGMARDI  234 (367)
T ss_dssp             EEESCSSTTCCEEECCCHHHHHH
T ss_pred             EEEecCCCCceEEECCCcccccc
Confidence            9998655   4999999998754

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.73  E-value=1.9e-17  Score=102.89  Aligned_cols=91  Identities=24%  Similarity=0.402  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC-
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~-   77 (101)
                      .|||++.+...+..  ....+.++++........  ..+++..+..++.|++.|+.++|+++++|+|+||+||+++.++ 
T Consensus        89 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~  168 (330)
T 3nsz_A           89 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR  168 (330)
T ss_dssp             TSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred             CCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCC
Confidence            49999999999887  667888898865432211  4588999999999999999999999999999999999999776 


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||+++...+.
T Consensus       169 ~~kl~Dfg~a~~~~~~  184 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPG  184 (330)
T ss_dssp             EEEECCCTTCEECCTT
T ss_pred             EEEEEeCCCceEcCCC
Confidence            7999999999866544

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.73  E-value=9.8e-18  Score=104.35  Aligned_cols=91  Identities=19%  Similarity=0.256  Sum_probs=78.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c---------------ccCCCHHHHHHHHHHHHHHHHHHHHCCce
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K---------------YQRLSNDHICYFLYQILRGLKYIHSANVL   62 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~---------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~   62 (101)
                      +.|||++.++..+...+.++.+++++....+    .               ...+++..+..++.+++.|+.++|+.+++
T Consensus       107 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  186 (333)
T 2i1m_A          107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI  186 (333)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             cCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            3799999999999999999999998643211    0               13468889999999999999999999999


Q ss_pred             eccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          63 HRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        63 ~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      |+|++|+||+++.++.++|+|||++.....
T Consensus       187 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  216 (333)
T 2i1m_A          187 HRDVAARNVLLTNGHVAKIGDFGLARDIMN  216 (333)
T ss_dssp             CSCCSGGGCEEEGGGEEEBCCCGGGCCGGG
T ss_pred             cCCcccceEEECCCCeEEECcccccccccc
Confidence            999999999999999999999999886544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.73  E-value=1.3e-17  Score=111.42  Aligned_cols=90  Identities=19%  Similarity=0.173  Sum_probs=76.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.. +.++++++++....+      ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus       394 ~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~  472 (613)
T 2ozo_A          394 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNR  472 (613)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             CCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCC
Confidence            69999999998876 568899998654322      22458899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||+++.....
T Consensus       473 ~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          473 HYAKISDFGLSKALGAD  489 (613)
T ss_dssp             TEEEECCCSTTTTCC--
T ss_pred             CcEEEeeccCcccccCC
Confidence            99999999999876543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=1.3e-17  Score=103.68  Aligned_cols=92  Identities=18%  Similarity=0.210  Sum_probs=77.8

Q ss_pred             CcccceeEEEEEeeCC----CceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHC--------Cceecc
Q psy7276           2 GFHQDQITIEIRHSTK----ESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSA--------NVLHRD   65 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~----~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~--------~i~~~~   65 (101)
                      ..|||++.++..+...    ..++.+++++...    ......+++..+..++.+++.|+.|+|..        +++|+|
T Consensus        88 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  167 (337)
T 3mdy_A           88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD  167 (337)
T ss_dssp             CCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSC
T ss_pred             hcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecc
Confidence            3799999999888776    6788999986542    22335688999999999999999999998        999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +||+||+++.++.++|+|||++..+...
T Consensus       168 ikp~Nill~~~~~~kl~Dfg~a~~~~~~  195 (337)
T 3mdy_A          168 LKSKNILVKKNGTCCIADLGLAVKFISD  195 (337)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             cchHHEEECCCCCEEEEeCCCceeeccc
Confidence            9999999999999999999998765443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.73  E-value=7.8e-18  Score=104.96  Aligned_cols=89  Identities=34%  Similarity=0.425  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee---
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~---   75 (101)
                      .|||++.++..+.....++++++++.....    ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.   
T Consensus        91 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~  170 (329)
T 3gbz_A           91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDA  170 (329)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC---
T ss_pred             CCCCcceEEEEEecCCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCC
Confidence            699999999999999999999998765322    2256899999999999999999999999999999999999954   


Q ss_pred             --CCCeEEEeeceecccc
Q psy7276          76 --TCDLKFFFYFFFSFFF   91 (101)
Q Consensus        76 --~~~~~i~dfgl~~~~~   91 (101)
                        ++.++|+|||++....
T Consensus       171 ~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          171 SETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             --CCEEEECCTTHHHHHC
T ss_pred             CccceEEECcCCCccccC
Confidence              3459999999987654

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.73  E-value=9.7e-18  Score=103.93  Aligned_cols=90  Identities=20%  Similarity=0.328  Sum_probs=73.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc----cCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY----QRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~nil   72 (101)
                      .|||++.++..+...+.++.++++.....+    ..    ..+++..+..++.|++.|+.++|+.+  ++|+|+||+||+
T Consensus        92 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIl  171 (309)
T 3p86_A           92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL  171 (309)
T ss_dssp             CCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEE
T ss_pred             CCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEE
Confidence            599999999999999999999998654222    11    23889999999999999999999999  999999999999


Q ss_pred             EeeCCCeEEEeeceeccccC
Q psy7276          73 LNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++.++|+|||+++....
T Consensus       172 l~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          172 VDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             ECTTCCEEECCCC-------
T ss_pred             EeCCCcEEECCCCCCccccc
Confidence            99999999999999875433

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.73  E-value=2.4e-17  Score=100.35  Aligned_cols=89  Identities=24%  Similarity=0.328  Sum_probs=78.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+..+.++++.....+      ....+++..+..++.|++.|+.++|+.+++|+|++|+||+++.+
T Consensus        69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~  148 (278)
T 3cok_A           69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN  148 (278)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTT
T ss_pred             CCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            699999999999999999999998644222      12468999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||++....
T Consensus       149 ~~~kl~dfg~~~~~~  163 (278)
T 3cok_A          149 MNIKIADFGLATQLK  163 (278)
T ss_dssp             CCEEECCCTTCEECC
T ss_pred             CCEEEEeecceeecc
Confidence            999999999887654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=1.7e-17  Score=101.74  Aligned_cols=91  Identities=18%  Similarity=0.210  Sum_probs=75.8

Q ss_pred             cccceeEEEEEeeCCCce-EEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESL-VSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.. +.++++.....+      ....+++..+..++.+++.|+.++|+++++|+|++|+||+++.
T Consensus        80 ~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~  159 (298)
T 3pls_A           80 NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE  159 (298)
T ss_dssp             CCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             CCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC
Confidence            599999999999876655 778887532211      1245788999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||+++.....
T Consensus       160 ~~~~kl~Dfg~~~~~~~~  177 (298)
T 3pls_A          160 SFTVKVADFGLARDILDR  177 (298)
T ss_dssp             TCCEEECCTTSSCTTTTG
T ss_pred             CCcEEeCcCCCcccccCC
Confidence            999999999999765443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.72  E-value=2.2e-17  Score=103.83  Aligned_cols=90  Identities=26%  Similarity=0.310  Sum_probs=73.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee--
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~--   75 (101)
                      .|||++.++..+.....++.++++.....+     ..+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.  
T Consensus       106 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~  185 (349)
T 2w4o_A          106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA  185 (349)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSS
T ss_pred             CCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCC
Confidence            599999999999999999999998654222     2356899999999999999999999999999999999999976  


Q ss_pred             -CCCeEEEeeceeccccC
Q psy7276          76 -TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 -~~~~~i~dfgl~~~~~~   92 (101)
                       ++.++|+|||+++....
T Consensus       186 ~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          186 PDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             TTCCEEECCCC-------
T ss_pred             CCCCEEEccCccccccCc
Confidence             78899999999886544

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.72  E-value=7.6e-18  Score=103.35  Aligned_cols=91  Identities=18%  Similarity=0.249  Sum_probs=73.7

Q ss_pred             cccceeEEEEEeeC--CCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST--KESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+..  ...++.+++++....+      ....+++..+..++.|++.|+.++|+.+++|+|++|+||+++
T Consensus        69 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~  148 (295)
T 3ugc_A           69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE  148 (295)
T ss_dssp             CCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred             CCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc
Confidence            59999999988754  3558889998644222      123588999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++......
T Consensus       149 ~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A          149 NENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             ETTEEEECCCCSCC-----
T ss_pred             CCCeEEEccCcccccccCC
Confidence            9999999999998866443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.72  E-value=4.2e-17  Score=99.99  Aligned_cols=91  Identities=21%  Similarity=0.232  Sum_probs=79.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.....+     ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  161 (298)
T 1phk_A           82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM  161 (298)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC
Confidence            599999999999999999999998654222     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||++....+.
T Consensus       162 ~~kl~dfg~~~~~~~~  177 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPG  177 (298)
T ss_dssp             CEEECCCTTCEECCTT
T ss_pred             cEEEecccchhhcCCC
Confidence            9999999998766543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.72  E-value=1.3e-17  Score=111.82  Aligned_cols=90  Identities=20%  Similarity=0.183  Sum_probs=76.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.. +.++++++++....+     ....+++..+..++.+++.|+.|+|+++++|+|+||+||+++.++
T Consensus       428 ~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~  506 (635)
T 4fl3_A          428 DNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH  506 (635)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             CCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCC
Confidence            59999999998864 567889998654322     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||+++.+...
T Consensus       507 ~~kL~DFGla~~~~~~  522 (635)
T 4fl3_A          507 YAKISDFGLSKALRAD  522 (635)
T ss_dssp             EEEECCTTHHHHTTC-
T ss_pred             CEEEEEcCCccccccC
Confidence            9999999999876543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.72  E-value=1.1e-17  Score=102.68  Aligned_cols=91  Identities=18%  Similarity=0.179  Sum_probs=76.0

Q ss_pred             CcccceeEEEEEeeC----CCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHH--------HCCceecc
Q psy7276           2 GFHQDQITIEIRHST----KESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIH--------SANVLHRD   65 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~----~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h--------~~~i~~~~   65 (101)
                      ..|||++.++..+..    ...++.++++....    ..+...+++..+..++.+++.|+.|+|        +.+++|+|
T Consensus        59 l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  138 (301)
T 3q4u_A           59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRD  138 (301)
T ss_dssp             CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSC
T ss_pred             ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCC
Confidence            479999999877543    45578888886542    223456899999999999999999999        99999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +||+||+++.++.++|+|||+++....
T Consensus       139 lkp~Nill~~~~~~kl~Dfg~a~~~~~  165 (301)
T 3q4u_A          139 LKSKNILVKKNGQCCIADLGLAVMHSQ  165 (301)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             CChHhEEEcCCCCEEEeeCCCeeeccc
Confidence            999999999999999999999875543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.72  E-value=2e-17  Score=102.66  Aligned_cols=90  Identities=18%  Similarity=0.209  Sum_probs=78.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSN   70 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~---~i~~~~lk~~n   70 (101)
                      .|||++.++..+......+.++++.....+         ....+++..+..++.+++.|+.++|+.   +++|+|++|+|
T Consensus        85 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N  164 (326)
T 3uim_A           85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN  164 (326)
T ss_dssp             CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG
T ss_pred             cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh
Confidence            599999999999999999999998654221         113488999999999999999999999   99999999999


Q ss_pred             eEEeeCCCeEEEeeceeccccC
Q psy7276          71 LLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        71 il~~~~~~~~i~dfgl~~~~~~   92 (101)
                      |+++.++.++|+|||++.....
T Consensus       165 il~~~~~~~kl~Dfg~~~~~~~  186 (326)
T 3uim_A          165 ILLDEEFEAVVGDFGLAKLMDY  186 (326)
T ss_dssp             EEECTTCCEEECCCSSCEECCS
T ss_pred             EEECCCCCEEeccCccccccCc
Confidence            9999999999999999886643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.72  E-value=2.2e-17  Score=102.64  Aligned_cols=88  Identities=22%  Similarity=0.298  Sum_probs=77.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc----c-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      ..|||++.++..+...+.++.++++.....+    .                 ...+++..+..++.+++.|+.++|+.+
T Consensus        83 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  162 (327)
T 1fvr_A           83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  162 (327)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999998643211    1                 135889999999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      ++|+|++|+||+++.++.++|+|||+++.
T Consensus       163 ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~  191 (327)
T 1fvr_A          163 FIHRDLAARNILVGENYVAKIADFGLSRG  191 (327)
T ss_dssp             EECSCCSGGGEEECGGGCEEECCTTCEES
T ss_pred             ccCCCCccceEEEcCCCeEEEcccCcCcc
Confidence            99999999999999999999999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.72  E-value=3e-17  Score=100.47  Aligned_cols=90  Identities=23%  Similarity=0.352  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+.....++.+++++....+         ....+++..+..++.+++.|+.++|+.+++|+|++|+||++
T Consensus        78 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~  157 (285)
T 3is5_A           78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILF  157 (285)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE
T ss_pred             CCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEE
Confidence            699999999999999999999998654211         12568999999999999999999999999999999999999


Q ss_pred             e---eCCCeEEEeeceeccccC
Q psy7276          74 N---TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~---~~~~~~i~dfgl~~~~~~   92 (101)
                      +   .++.++|+|||++..+..
T Consensus       158 ~~~~~~~~~kl~Dfg~a~~~~~  179 (285)
T 3is5_A          158 QDTSPHSPIKIIDFGLAELFKS  179 (285)
T ss_dssp             SSSSTTCCEEECCCCCCCC---
T ss_pred             ecCCCCCCEEEEeeecceecCC
Confidence            4   457799999999876544

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.72  E-value=2.2e-17  Score=100.84  Aligned_cols=91  Identities=18%  Similarity=0.199  Sum_probs=79.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.++.++++.....+       ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.
T Consensus        67 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~  146 (288)
T 3kfa_A           67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE  146 (288)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECG
T ss_pred             CCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcC
Confidence            599999999999999999999998653211       1245889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||++......
T Consensus       147 ~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A          147 NHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             GGCEEECCCCGGGTSCSS
T ss_pred             CCCEEEccCccceeccCC
Confidence            999999999998866543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=1.2e-17  Score=105.75  Aligned_cols=90  Identities=31%  Similarity=0.547  Sum_probs=76.3

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeeccccc---cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSH---RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+      .++.++++....   ......+++..+..++.|++.|+.|+|+.+++|+|+||+||++
T Consensus        82 ~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll  161 (367)
T 1cm8_A           82 RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV  161 (367)
T ss_dssp             CBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCcCCCCceeeEecCCccccCceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE
Confidence            5999999999887653      458888876332   2233678999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++|+|||+++....
T Consensus       162 ~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          162 NEDCELKILDFGLARQADS  180 (367)
T ss_dssp             CTTCCEEECCCTTCEECCS
T ss_pred             cCCCCEEEEeeeccccccc
Confidence            9999999999999886543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.72  E-value=2.5e-17  Score=104.97  Aligned_cols=89  Identities=18%  Similarity=0.175  Sum_probs=74.5

Q ss_pred             ccceeEEEEEeeCCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCe
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL   79 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~   79 (101)
                      |||++.++..+...+.+++++++.....    .....+++..+..++.|++.|+.|+|+.+++|+|+||+||+++ ++.+
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~  193 (390)
T 2zmd_A          115 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGML  193 (390)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCE
T ss_pred             CCeEEEEEEEEecCCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeE
Confidence            6999999999999999999999643221    1235688889999999999999999999999999999999995 5889


Q ss_pred             EEEeeceeccccCc
Q psy7276          80 KFFFYFFFSFFFHF   93 (101)
Q Consensus        80 ~i~dfgl~~~~~~~   93 (101)
                      +|+|||+++.+.+.
T Consensus       194 kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          194 KLIDFGIANQMQPD  207 (390)
T ss_dssp             EECCCSSSCCC---
T ss_pred             EEEecCccccccCC
Confidence            99999999876543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.72  E-value=4.5e-17  Score=98.89  Aligned_cols=89  Identities=24%  Similarity=0.358  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.....+     ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  142 (276)
T 2yex_A           63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD  142 (276)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCC
Confidence            699999999999999999999998654222     224688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++..+.
T Consensus       143 ~~kl~dfg~~~~~~  156 (276)
T 2yex_A          143 NLKISDFGLATVFR  156 (276)
T ss_dssp             CEEECCCTTCEECE
T ss_pred             CEEEeeCCCccccC
Confidence            99999999887543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.72  E-value=2e-17  Score=101.48  Aligned_cols=91  Identities=18%  Similarity=0.233  Sum_probs=76.4

Q ss_pred             cccceeEEEEEe-eCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRH-STKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~-~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+ ...+..+.++++.....+      ....+++..+..++.|++.|+.++|+++++|+|++|+||+++.
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~  163 (298)
T 3f66_A           84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE  163 (298)
T ss_dssp             CCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             CCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECC
Confidence            599999999875 556778889988654222      2245788999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||++..+...
T Consensus       164 ~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          164 KFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             TCCEEECSCGGGCCCSCG
T ss_pred             CCCEEECccccccccccc
Confidence            999999999998865443

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.72  E-value=2.3e-17  Score=104.66  Aligned_cols=91  Identities=26%  Similarity=0.346  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCC--------------------------------------ceEEEeecccccc--------ccccC
Q psy7276           3 FHQDQITIEIRHSTKE--------------------------------------SLVSFREYSDSHR--------TKYQR   36 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~--------------------------------------~l~~~~~~~~~~~--------~~~~~   36 (101)
                      .|||++.++..+...+                                      .++.++++.....        .....
T Consensus        58 ~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~  137 (383)
T 3eb0_A           58 DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRS  137 (383)
T ss_dssp             CCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCC
T ss_pred             CCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCC
Confidence            6999999998885433                                      3778899865431        12356


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe-eCCCeEEEeeceeccccCc
Q psy7276          37 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        37 ~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~-~~~~~~i~dfgl~~~~~~~   93 (101)
                      +++..+..++.|++.|+.|+|+.+++|+|+||+||+++ .++.++|+|||+++.+.+.
T Consensus       138 l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  195 (383)
T 3eb0_A          138 IPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS  195 (383)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC
Confidence            89999999999999999999999999999999999998 5789999999999865443

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.72  E-value=4.1e-17  Score=101.05  Aligned_cols=90  Identities=13%  Similarity=0.141  Sum_probs=77.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c-----------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K-----------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.++..+...+..+.++++.....+    .           ...+++..+..++.+++.|+.++|+++++|+|++
T Consensus        86 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  165 (322)
T 1p4o_A           86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLA  165 (322)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCS
T ss_pred             CCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCc
Confidence            599999999999999999999998643211    1           0345788999999999999999999999999999


Q ss_pred             CCCeEEeeCCCeEEEeeceeccccC
Q psy7276          68 PSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        68 ~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      |+||+++.++.++|+|||+++....
T Consensus       166 p~NIli~~~~~~kl~Dfg~~~~~~~  190 (322)
T 1p4o_A          166 ARNCMVAEDFTVKIGDFGMTRDIYE  190 (322)
T ss_dssp             GGGEEECTTCCEEECCTTCCCGGGG
T ss_pred             cceEEEcCCCeEEECcCcccccccc
Confidence            9999999999999999999876543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.72  E-value=4.7e-17  Score=100.25  Aligned_cols=90  Identities=19%  Similarity=0.221  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc--------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT--------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...+..+.++++.....+        ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++
T Consensus        88 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~  167 (307)
T 2nru_A           88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD  167 (307)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             CCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc
Confidence            599999999999999999999998643211        124588999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++|+|||++.....
T Consensus       168 ~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          168 EAFTAKISDFGLARASEK  185 (307)
T ss_dssp             TTCCEEECCCTTCEECCS
T ss_pred             CCCcEEEeeccccccccc
Confidence            999999999999876543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.72  E-value=1e-17  Score=103.88  Aligned_cols=91  Identities=15%  Similarity=0.163  Sum_probs=69.8

Q ss_pred             cccceeEEEEEeeCCCce------EEEeecccccccc-----------ccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHSTKESL------VSFREYSDSHRTK-----------YQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|||++.++..+......      +.++++.....+.           ...+++..+..++.|++.|+.|+|+++++|+|
T Consensus        83 ~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~D  162 (323)
T 3qup_A           83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRD  162 (323)
T ss_dssp             CCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence            599999999888776554      7888875442111           11588999999999999999999999999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +||+||+++.++.++|+|||+++.....
T Consensus       163 ikp~NIli~~~~~~kl~Dfg~a~~~~~~  190 (323)
T 3qup_A          163 LAARNCMLAEDMTVCVADFGLSRKIYSG  190 (323)
T ss_dssp             CSGGGEEECTTSCEEECCCCC-------
T ss_pred             CCcceEEEcCCCCEEEeecccccccccc
Confidence            9999999999999999999998865443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.72  E-value=4.4e-17  Score=99.47  Aligned_cols=89  Identities=21%  Similarity=0.333  Sum_probs=78.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        72 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  151 (284)
T 2vgo_A           72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG  151 (284)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC
T ss_pred             CCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC
Confidence            599999999999999999999998654222     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceecccc
Q psy7276          78 DLKFFFYFFFSFFF   91 (101)
Q Consensus        78 ~~~i~dfgl~~~~~   91 (101)
                      .++|+|||++....
T Consensus       152 ~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A          152 ELKIADFGWSVHAP  165 (284)
T ss_dssp             CEEECCCTTCEECS
T ss_pred             CEEEecccccccCc
Confidence            99999999876544

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.72  E-value=2.9e-17  Score=99.27  Aligned_cols=90  Identities=16%  Similarity=0.230  Sum_probs=78.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+..+.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~  140 (267)
T 3t9t_A           61 SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN  140 (267)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGG
T ss_pred             CCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCC
Confidence            599999999999999999999998653222      12458899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||++.....
T Consensus       141 ~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A          141 QVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             GCEEECCTTGGGGBCC
T ss_pred             CCEEEccccccccccc
Confidence            9999999999886543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.71  E-value=2.8e-17  Score=102.93  Aligned_cols=89  Identities=18%  Similarity=0.176  Sum_probs=74.8

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCe
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL   79 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~   79 (101)
                      |||++.++..+.....+++++++......    ..+.+++..+..++.|++.|+.|+|+.+++|+|+||+||+++ ++.+
T Consensus        68 ~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~  146 (343)
T 3dbq_A           68 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGML  146 (343)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEE
T ss_pred             CCceEEEeeeEeeCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcE
Confidence            39999999999999999999996433221    235688999999999999999999999999999999999996 6789


Q ss_pred             EEEeeceeccccCc
Q psy7276          80 KFFFYFFFSFFFHF   93 (101)
Q Consensus        80 ~i~dfgl~~~~~~~   93 (101)
                      +|+|||+++.+.+.
T Consensus       147 kl~DFG~a~~~~~~  160 (343)
T 3dbq_A          147 KLIDFGIANQMQPD  160 (343)
T ss_dssp             EECCCSSSCCC---
T ss_pred             EEeecccccccCcc
Confidence            99999999866543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.71  E-value=3e-17  Score=101.89  Aligned_cols=91  Identities=24%  Similarity=0.360  Sum_probs=78.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        73 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~  152 (321)
T 2a2a_A           73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (321)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             CCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC
Confidence            599999999999999999999998643222     235678999999999999999999999999999999999998887


Q ss_pred             ----CeEEEeeceeccccCc
Q psy7276          78 ----DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ----~~~i~dfgl~~~~~~~   93 (101)
                          .++|+|||++......
T Consensus       153 ~~~~~~kl~Dfg~~~~~~~~  172 (321)
T 2a2a_A          153 IPIPHIKLIDFGLAHEIEDG  172 (321)
T ss_dssp             SSSCCEEECCCTTCEECCTT
T ss_pred             CCcCCEEEccCccceecCcc
Confidence                7999999998866543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.71  E-value=8.6e-18  Score=107.32  Aligned_cols=90  Identities=28%  Similarity=0.424  Sum_probs=72.4

Q ss_pred             cccceeEEEEEe--eCCCceEEEeecccccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q psy7276           3 FHQDQITIEIRH--STKESLVSFREYSDSHRTK-------------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLK   67 (101)
Q Consensus         3 ~h~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk   67 (101)
                      .|||++.++..+  .....++++++++......             ...+++..+..++.|++.|+.|+|+++++|+|+|
T Consensus        76 ~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlk  155 (405)
T 3rgf_A           76 KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK  155 (405)
T ss_dssp             CCTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcC
Confidence            599999999888  4577888999986543211             1248899999999999999999999999999999


Q ss_pred             CCCeEE----eeCCCeEEEeeceeccccC
Q psy7276          68 PSNLLL----NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        68 ~~nil~----~~~~~~~i~dfgl~~~~~~   92 (101)
                      |+||++    +.++.++|+|||+++.+..
T Consensus       156 p~NIll~~~~~~~~~~kl~Dfg~a~~~~~  184 (405)
T 3rgf_A          156 PANILVMGEGPERGRVKIADMGFARLFNS  184 (405)
T ss_dssp             GGGEEECCSSTTTTCEEECCTTCCC----
T ss_pred             HHHeEEecCCCCCCcEEEEECCCceecCC
Confidence            999999    5668899999999986543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.71  E-value=5.6e-17  Score=99.38  Aligned_cols=92  Identities=14%  Similarity=0.134  Sum_probs=78.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|++++.++..+......+.++++......   .  ...+++..+..++.|++.|+.++|+++++|+|++|+||+++.+
T Consensus        63 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  142 (298)
T 1csn_A           63 AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRP  142 (298)
T ss_dssp             TTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCS
T ss_pred             hcCCCCCeEEeecCCCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccC
Confidence            4689999999999999999999998733221   1  2458999999999999999999999999999999999999877


Q ss_pred             CC-----eEEEeeceeccccCc
Q psy7276          77 CD-----LKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~-----~~i~dfgl~~~~~~~   93 (101)
                      +.     ++|+|||+++.....
T Consensus       143 ~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A          143 NSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             SSTTTTCEEECCCTTCEESBCT
T ss_pred             CCCCCCeEEEEECccccccccc
Confidence            65     999999998866543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.71  E-value=2.6e-17  Score=106.58  Aligned_cols=89  Identities=20%  Similarity=0.281  Sum_probs=75.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+. .+.+++++++.....+    .   ...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.
T Consensus       241 ~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~  319 (454)
T 1qcf_A          241 QHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA  319 (454)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT
T ss_pred             CCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECC
Confidence            6999999998875 6678899998654222    1   135788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.+||+|||+++....
T Consensus       320 ~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          320 SLVCKIADFGLARVIED  336 (454)
T ss_dssp             TCCEEECSTTGGGGBCC
T ss_pred             CCcEEEeeCCCceEcCC
Confidence            99999999999986643

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.71  E-value=6.9e-17  Score=98.46  Aligned_cols=91  Identities=20%  Similarity=0.218  Sum_probs=78.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.....+     ....+++..+..++.+++.|+.++|+++++|+|++|+||+++.++
T Consensus        63 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  142 (284)
T 3kk8_A           63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA  142 (284)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC
Confidence            599999999999999999999998654322     235689999999999999999999999999999999999998765


Q ss_pred             C---eEEEeeceeccccCc
Q psy7276          78 D---LKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~---~~i~dfgl~~~~~~~   93 (101)
                      .   ++|+|||++......
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A          143 KGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             TTCCEEECCCTTCEECCSS
T ss_pred             CCCcEEEeeceeeEEcccC
Confidence            5   999999998765543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.71  E-value=4.7e-17  Score=99.72  Aligned_cols=90  Identities=20%  Similarity=0.179  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+ ..+.++.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        76 ~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~  154 (291)
T 1xbb_A           76 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH  154 (291)
T ss_dssp             CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             CCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC
Confidence            699999999988 56778889998653222     224588999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||++......
T Consensus       155 ~~kl~Dfg~~~~~~~~  170 (291)
T 1xbb_A          155 YAKISDFGLSKALRAD  170 (291)
T ss_dssp             EEEECCCTTCEECCTT
T ss_pred             cEEEccCCcceeeccC
Confidence            9999999998866543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.71  E-value=4.2e-17  Score=101.11  Aligned_cols=91  Identities=13%  Similarity=0.181  Sum_probs=74.6

Q ss_pred             cccceeEEEEEeeCCC--ceEEEeeccccccc----c----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKE--SLVSFREYSDSHRT----K----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~--~l~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+....  .++.+++++....+    .    ...+++..+..++.|++.|+.|+|+++++|+|+||+||+
T Consensus        65 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIl  144 (319)
T 4euu_A           65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM  144 (319)
T ss_dssp             CCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEE
Confidence            5999999998887654  77899998653211    1    123899999999999999999999999999999999999


Q ss_pred             E----eeCCCeEEEeeceeccccCc
Q psy7276          73 L----NTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        73 ~----~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +    +.++.++|+|||+++.....
T Consensus       145 l~~~~~~~~~~kL~Dfg~a~~~~~~  169 (319)
T 4euu_A          145 RVIGEDGQSVYKLTDFGAARELEDD  169 (319)
T ss_dssp             EEECTTSCEEEEECCCTTCEECCTT
T ss_pred             EeccCCCCceEEEccCCCceecCCC
Confidence            8    55567999999999876544

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=5.9e-17  Score=99.13  Aligned_cols=90  Identities=20%  Similarity=0.177  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+ ..+.++.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        68 ~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~  146 (287)
T 1u59_A           68 DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR  146 (287)
T ss_dssp             CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET
T ss_pred             CCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCC
Confidence            599999999988 45668889998654221      22458899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||++......
T Consensus       147 ~~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A          147 HYAKISDFGLSKALGAD  163 (287)
T ss_dssp             TEEEECCCTTCEECTTC
T ss_pred             CCEEECcccceeeeccC
Confidence            99999999998866443

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.71  E-value=3.2e-17  Score=100.93  Aligned_cols=91  Identities=23%  Similarity=0.264  Sum_probs=76.8

Q ss_pred             CcccceeEEEEEeeC----CCceEEEeeccccccc----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           2 GFHQDQITIEIRHST----KESLVSFREYSDSHRT----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      ..|||++.++..+..    ...++.+++++....+    .   ...+++..+..++.+++.|+.|+|+.+++|+|++|+|
T Consensus        68 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N  147 (299)
T 3m2w_A           68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  147 (299)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             ccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            469999999988876    6778899998654211    1   1358999999999999999999999999999999999


Q ss_pred             eEEee---CCCeEEEeeceeccccC
Q psy7276          71 LLLNT---TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        71 il~~~---~~~~~i~dfgl~~~~~~   92 (101)
                      |+++.   ++.++|+|||++.....
T Consensus       148 il~~~~~~~~~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A          148 LLYTSKRPNAILKLTDFGFAKETTG  172 (299)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECTT
T ss_pred             EEEecCCCCCcEEEecccccccccc
Confidence            99988   67899999999886654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.71  E-value=5.1e-17  Score=109.55  Aligned_cols=90  Identities=27%  Similarity=0.318  Sum_probs=76.0

Q ss_pred             cccceeEEEEEeeCCCc-----eEEEeecccccccc---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKES-----LVSFREYSDSHRTK---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...+.     .++++|+.....+.   ...+++..+..++.|++.|+.|+|+++++|+|+||+||+++
T Consensus       137 ~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~  216 (681)
T 2pzi_A          137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT  216 (681)
T ss_dssp             CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred             CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe
Confidence            59999999998887665     68999986543322   23688999999999999999999999999999999999998


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .+ .++|+|||+++.....
T Consensus       217 ~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          217 EE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             SS-CEEECCCTTCEETTCC
T ss_pred             CC-cEEEEecccchhcccC
Confidence            75 8999999998866543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.71  E-value=4.3e-17  Score=100.81  Aligned_cols=90  Identities=18%  Similarity=0.097  Sum_probs=75.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        92 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~  171 (309)
T 2h34_A           92 QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD  171 (309)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC
Confidence            699999999999999999999998654222     225689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++|+|||++.....
T Consensus       172 ~~kl~Dfg~~~~~~~  186 (309)
T 2h34_A          172 FAYLVDFGIASATTD  186 (309)
T ss_dssp             CEEECSCCC------
T ss_pred             CEEEecCccCccccc
Confidence            999999998876543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=1.9e-17  Score=105.08  Aligned_cols=90  Identities=17%  Similarity=0.231  Sum_probs=69.7

Q ss_pred             cccceeEEEEEee-CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHS-TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~-~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+. ..+..+.++++.....+      ....+++..+..++.|++.|+.|+|+++++|+|++|+||+++.
T Consensus       148 ~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  227 (373)
T 3c1x_A          148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE  227 (373)
T ss_dssp             CCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECC
Confidence            5999999998754 45678889998654222      1234788889999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||+++.+..
T Consensus       228 ~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          228 KFTVKVADFGLARDMYD  244 (373)
T ss_dssp             TCCEEECCC--------
T ss_pred             CCCEEEeeccccccccc
Confidence            99999999999986543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.71  E-value=6.5e-17  Score=99.50  Aligned_cols=90  Identities=23%  Similarity=0.256  Sum_probs=79.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+...+.++.++++....    ....+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++.
T Consensus        78 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~  157 (303)
T 3a7i_A           78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE  157 (303)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             CCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCC
Confidence            6999999999999999999999986542    223467899999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccC
Q psy7276          79 LKFFFYFFFSFFFH   92 (101)
Q Consensus        79 ~~i~dfgl~~~~~~   92 (101)
                      ++|+|||++.....
T Consensus       158 ~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A          158 VKLADFGVAGQLTD  171 (303)
T ss_dssp             EEECCCTTCEECBT
T ss_pred             EEEeecccceecCc
Confidence            99999999876544

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.71  E-value=4.8e-17  Score=98.59  Aligned_cols=90  Identities=24%  Similarity=0.344  Sum_probs=72.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~---i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+...+.++.++++.....    .....+++..+..++.+++.|+.++|+++   ++|+|++|+||+++.
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~  143 (271)
T 3dtc_A           64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ  143 (271)
T ss_dssp             CCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESS
T ss_pred             CCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEec
Confidence            59999999999999999999999865332    23467899999999999999999999999   899999999999986


Q ss_pred             --------CCCeEEEeeceeccccC
Q psy7276          76 --------TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 --------~~~~~i~dfgl~~~~~~   92 (101)
                              ++.++++|||++..+..
T Consensus       144 ~~~~~~~~~~~~kl~Dfg~~~~~~~  168 (271)
T 3dtc_A          144 KVENGDLSNKILKITDFGLAREWHR  168 (271)
T ss_dssp             CCSSSCCSSCCEEECCCCC------
T ss_pred             ccccccccCcceEEccCCccccccc
Confidence                    67799999999876544

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.71  E-value=5.3e-17  Score=98.62  Aligned_cols=90  Identities=27%  Similarity=0.324  Sum_probs=79.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+..+.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  148 (276)
T 2h6d_A           69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM  148 (276)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS
T ss_pred             CCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC
Confidence            599999999999999999999998653222     235689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .++++|||++.....
T Consensus       149 ~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A          149 NAKIADFGLSNMMSD  163 (276)
T ss_dssp             CEEECCCCGGGCCCC
T ss_pred             CEEEeecccccccCC
Confidence            999999999876544

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.70  E-value=4.3e-17  Score=100.01  Aligned_cols=89  Identities=30%  Similarity=0.394  Sum_probs=77.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++......      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~  139 (299)
T 2r3i_A           60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE  139 (299)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             CCCCeeeEEEEEecCCceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCC
Confidence            599999999999999999999998654221      11457888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||++....
T Consensus       140 ~~~kl~dfg~~~~~~  154 (299)
T 2r3i_A          140 GAIKLADFGLARAFG  154 (299)
T ss_dssp             SCEEECSTTHHHHHC
T ss_pred             CCEEECcchhhhhcc
Confidence            999999999887654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.70  E-value=3e-17  Score=102.33  Aligned_cols=89  Identities=15%  Similarity=0.162  Sum_probs=70.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.... .+.++++.....+      ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        75 ~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~  153 (327)
T 3lzb_A           75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP  153 (327)
T ss_dssp             CBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred             CCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC
Confidence            5999999999888765 5556665432211      22568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||+++....
T Consensus       154 ~~~kL~DfG~a~~~~~  169 (327)
T 3lzb_A          154 QHVKITDFGLAKLLGA  169 (327)
T ss_dssp             TEEEECCTTC------
T ss_pred             CCEEEccCcceeEccC
Confidence            9999999999886543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.70  E-value=5.8e-17  Score=104.91  Aligned_cols=89  Identities=18%  Similarity=0.209  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCC-ceEEEeeccccccc----c-c--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE-SLVSFREYSDSHRT----K-Y--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~-~l~~~~~~~~~~~~----~-~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+.... .+++++++.....+    . .  ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++
T Consensus       244 ~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~  323 (450)
T 1k9a_A          244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS  323 (450)
T ss_dssp             CCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             cCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC
Confidence            6999999999876654 78999998654221    1 1  2368889999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||+++...
T Consensus       324 ~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          324 EDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             TTSCEEECCCTTCEECC
T ss_pred             CCCCEEEeeCCCccccc
Confidence            99999999999987543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.70  E-value=3.9e-17  Score=104.92  Aligned_cols=90  Identities=27%  Similarity=0.341  Sum_probs=72.2

Q ss_pred             cccceeEEEEEeeCC------CceEEEeeccccccc--------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHSTK------ESLVSFREYSDSHRT--------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~------~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||++.++..+...      ..+++++++......        ....+++..+..++.|++.|+.|+|+.+++|+|+||
T Consensus       105 ~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  184 (420)
T 1j1b_A          105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP  184 (420)
T ss_dssp             CCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSG
T ss_pred             CCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCh
Confidence            699999998777432      125678887543211        235688999999999999999999999999999999


Q ss_pred             CCeEEeeC-CCeEEEeeceeccccC
Q psy7276          69 SNLLLNTT-CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        69 ~nil~~~~-~~~~i~dfgl~~~~~~   92 (101)
                      +||+++.+ +.+||+|||+++.+..
T Consensus       185 ~NILl~~~~~~~kl~DFG~a~~~~~  209 (420)
T 1j1b_A          185 QNLLLDPDTAVLKLCDFGSAKQLVR  209 (420)
T ss_dssp             GGEEEETTTTEEEECCCTTCEECCT
T ss_pred             hhEEEeCCCCeEEeccchhhhhccc
Confidence            99999965 5689999999986544

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.70  E-value=6.5e-17  Score=99.21  Aligned_cols=89  Identities=22%  Similarity=0.351  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      .|||++.++..+...+..+.++++.....+             ..+.+++..+..++.|++.|+.++|+.+++|+|++|+
T Consensus        71 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~  150 (303)
T 2vwi_A           71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG  150 (303)
T ss_dssp             CCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred             CCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChh
Confidence            599999999999999999999998643211             1245889999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceecccc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      ||+++.++.++|+|||++....
T Consensus       151 Nil~~~~~~~kl~dfg~~~~~~  172 (303)
T 2vwi_A          151 NILLGEDGSVQIADFGVSAFLA  172 (303)
T ss_dssp             GEEECTTCCEEECCCHHHHHCC
T ss_pred             hEEEcCCCCEEEEeccchheec
Confidence            9999999999999999887554

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.70  E-value=7.7e-17  Score=100.23  Aligned_cols=91  Identities=21%  Similarity=0.251  Sum_probs=76.5

Q ss_pred             cccceeEEEEEee--CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHS--TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~--~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+.  ....++.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++
T Consensus        82 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~  161 (327)
T 3lxl_A           82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE  161 (327)
T ss_dssp             CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             CCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC
Confidence            6899999988776  45668899998643222      124589999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++......
T Consensus       162 ~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          162 SEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             ETTEEEECCGGGCEECCTT
T ss_pred             CCCCEEEcccccceecccC
Confidence            9999999999998866443

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.70  E-value=3e-17  Score=103.91  Aligned_cols=89  Identities=37%  Similarity=0.619  Sum_probs=67.8

Q ss_pred             cccceeEEEEEeeCC------CceEEEeeccccc---cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTK------ESLVSFREYSDSH---RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~------~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...      ..++.++++....   ......+++..+..++.|++.|+.|+|+.+++|+|+||+||++
T Consensus        86 ~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll  165 (367)
T 2fst_X           86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV  165 (367)
T ss_dssp             CCTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CCCCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE
Confidence            599999999888654      5567787775432   2233568999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++|+|||+++...
T Consensus       166 ~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          166 NEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CTTCCEEECC--------
T ss_pred             CCCCCEEEeecccccccc
Confidence            999999999999987654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.70  E-value=7.5e-17  Score=100.07  Aligned_cols=91  Identities=22%  Similarity=0.244  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...  ..++.++++....    ......+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        91 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~  170 (318)
T 3lxp_A           91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND  170 (318)
T ss_dssp             CCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCC
Confidence            599999999988764  5677889886432    2233568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||++......
T Consensus       171 ~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          171 RLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             CCEEECCGGGCEECCTT
T ss_pred             CCEEECCcccccccccc
Confidence            99999999998876543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.70  E-value=4.2e-17  Score=102.85  Aligned_cols=91  Identities=54%  Similarity=0.740  Sum_probs=77.4

Q ss_pred             cccceeEEEEEeeCC-----CceEEEeecccccc---ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTK-----ESLVSFREYSDSHR---TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~-----~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...     ..++.++++.....   ...+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++
T Consensus        83 ~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~  162 (364)
T 3qyz_A           83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN  162 (364)
T ss_dssp             CCTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             CCCCCccceeEEecCCccccceEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC
Confidence            599999998888654     46788888865432   2336789999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++......
T Consensus       163 ~~~~~kl~Dfg~a~~~~~~  181 (364)
T 3qyz_A          163 TTCDLKICDFGLARVADPD  181 (364)
T ss_dssp             TTCCEEECCCTTCEECCGG
T ss_pred             CCCCEEEEeCcceEecCCC
Confidence            9999999999998866543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.70  E-value=4.3e-17  Score=105.00  Aligned_cols=89  Identities=21%  Similarity=0.242  Sum_probs=77.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|+|++.++..+.....+++++++......      ....+++..+..++.|++.|+.|+|+.+++|+|+||+||+++.+
T Consensus       157 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~  236 (429)
T 3kvw_A          157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ  236 (429)
T ss_dssp             SCSCBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESST
T ss_pred             CCcCEEEEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccC
Confidence            588999999999999999999998654322      11348899999999999999999999999999999999999998


Q ss_pred             CC--eEEEeeceecccc
Q psy7276          77 CD--LKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~--~~i~dfgl~~~~~   91 (101)
                      +.  ++|+|||++....
T Consensus       237 ~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          237 GRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             TSCCEEECCCTTCEETT
T ss_pred             CCcceEEeecccceecC
Confidence            87  9999999986543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.70  E-value=2.6e-17  Score=104.12  Aligned_cols=90  Identities=36%  Similarity=0.539  Sum_probs=74.7

Q ss_pred             cccceeEEEEEeeCCCce------EEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESL------VSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...+..      +.++++.......  ...+++..+..++.+++.|+.|+|+++++|+|++|+||+++
T Consensus        99 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~  178 (371)
T 4exu_A           99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN  178 (371)
T ss_dssp             CCTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCCCchhhhhheeccCCcccceeEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC
Confidence            599999999999877665      8888886643322  24589999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++|+|||+++....
T Consensus       179 ~~~~~kL~Dfg~a~~~~~  196 (371)
T 4exu_A          179 EDCELKILDFGLARHADA  196 (371)
T ss_dssp             TTCCEEECSTTCC-----
T ss_pred             CCCCEEEEecCccccccc
Confidence            999999999999875543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.70  E-value=9.2e-17  Score=99.20  Aligned_cols=90  Identities=24%  Similarity=0.303  Sum_probs=79.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+      ....+++..+..++.+++.|+.++|..+++|+|++|+||+++.+
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~  161 (314)
T 3com_A           82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE  161 (314)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCC
Confidence            699999999999999999999998654221      23568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||++.....
T Consensus       162 ~~~kl~dfg~~~~~~~  177 (314)
T 3com_A          162 GHAKLADFGVAGQLTD  177 (314)
T ss_dssp             CCEEECCCTTCEECBT
T ss_pred             CCEEEeecccchhhhh
Confidence            9999999999876543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.70  E-value=8.2e-17  Score=99.00  Aligned_cols=89  Identities=26%  Similarity=0.359  Sum_probs=74.9

Q ss_pred             cccceeEEEEEe--eCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRH--STKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~--~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+  .....++.++|+......      ....+++..+..++.|++.|+.++|+++++|+|++|+||+++
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~  143 (305)
T 2wtk_C           64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT  143 (305)
T ss_dssp             CCTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             CCCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc
Confidence            599999999988  456688899998654311      235688999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++++|||++....
T Consensus       144 ~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C          144 TGGTLKISALGVAEALH  160 (305)
T ss_dssp             TTCCEEECCCTTCEECC
T ss_pred             CCCcEEeeccccccccC
Confidence            99999999999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.70  E-value=6.4e-17  Score=101.27  Aligned_cols=89  Identities=40%  Similarity=0.605  Sum_probs=76.5

Q ss_pred             cccceeEEEEEeeCC-----CceEEEeeccccccc---cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTK-----ESLVSFREYSDSHRT---KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...     ...+.++++......   ..+.+++..+..++.|++.|+.++|+++++|+|++|+||+++
T Consensus        67 ~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~  146 (353)
T 2b9h_A           67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN  146 (353)
T ss_dssp             CCTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             cCCCcCCeeeeecccccCccceEEEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc
Confidence            599999999877653     678889988654322   235689999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||++....
T Consensus       147 ~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A          147 SNCDLKVCDFGLARIID  163 (353)
T ss_dssp             TTCCEEECCCTTCEECC
T ss_pred             CCCcEEEEecccccccc
Confidence            99999999999988654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.70  E-value=4.8e-17  Score=100.96  Aligned_cols=91  Identities=23%  Similarity=0.324  Sum_probs=76.5

Q ss_pred             cccceeEEEEEee--------CCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecc
Q psy7276           3 FHQDQITIEIRHS--------TKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~   65 (101)
                      .|||++.++..+.        ....++.+++++.....       ..+.+++..+..++.+++.|+.|+|+.+  ++|+|
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~D  163 (337)
T 3ll6_A           84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD  163 (337)
T ss_dssp             TSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCC
T ss_pred             cCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEcc
Confidence            5999999998883        44457888888654321       2356899999999999999999999999  99999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ++|+||+++.++.++|+|||++......
T Consensus       164 ikp~NIl~~~~~~~kl~Dfg~~~~~~~~  191 (337)
T 3ll6_A          164 LKVENLLLSNQGTIKLCDFGSATTISHY  191 (337)
T ss_dssp             CCGGGCEECTTSCEEBCCCTTCBCCSSC
T ss_pred             CCcccEEECCCCCEEEecCccceecccc
Confidence            9999999999999999999998876543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.70  E-value=6.4e-17  Score=108.88  Aligned_cols=90  Identities=16%  Similarity=0.192  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+. .+.++.++++.....+      ....+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus       449 ~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~  527 (656)
T 2j0j_A          449 DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN  527 (656)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             CCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCC
Confidence            5999999998874 4568899998654222      12357899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||+++.....
T Consensus       528 ~~vkL~DFG~a~~~~~~  544 (656)
T 2j0j_A          528 DCVKLGDFGLSRYMEDS  544 (656)
T ss_dssp             TEEEECCCCCCCSCCC-
T ss_pred             CCEEEEecCCCeecCCC
Confidence            99999999999876543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.70  E-value=7.3e-17  Score=100.00  Aligned_cols=90  Identities=26%  Similarity=0.402  Sum_probs=76.4

Q ss_pred             cccceeEEEEEee-----CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHS-----TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+.     ....++.++++......      ....+++..+..++.+++.|+.++|+.+++|+|++|+||
T Consensus        72 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Ni  151 (326)
T 1blx_A           72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI  151 (326)
T ss_dssp             CCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             CCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHe
Confidence            6999999998876     56678888888654322      113488999999999999999999999999999999999


Q ss_pred             EEeeCCCeEEEeeceeccccC
Q psy7276          72 LLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +++.++.++|+|||++.....
T Consensus       152 li~~~~~~kl~Dfg~~~~~~~  172 (326)
T 1blx_A          152 LVTSSGQIKLADFGLARIYSF  172 (326)
T ss_dssp             EECTTCCEEECSCCSCCCCCG
T ss_pred             EEcCCCCEEEecCcccccccC
Confidence            999999999999999876543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.70  E-value=5.8e-17  Score=99.55  Aligned_cols=86  Identities=21%  Similarity=0.267  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.+++++....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        74 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~  153 (302)
T 2j7t_A           74 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE  153 (302)
T ss_dssp             CCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT
T ss_pred             CCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCC
Confidence            699999999999999999999998654322      12568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceec
Q psy7276          77 CDLKFFFYFFFS   88 (101)
Q Consensus        77 ~~~~i~dfgl~~   88 (101)
                      +.++|+|||++.
T Consensus       154 ~~~kl~Dfg~~~  165 (302)
T 2j7t_A          154 GDIRLADFGVSA  165 (302)
T ss_dssp             SCEEECCCHHHH
T ss_pred             CCEEEEECCCCc
Confidence            999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.70  E-value=5.8e-17  Score=99.29  Aligned_cols=88  Identities=19%  Similarity=0.266  Sum_probs=69.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++. +.....++.+++++....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        78 ~h~~iv~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~  156 (289)
T 3og7_A           78 RHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED  156 (289)
T ss_dssp             CCTTBCCEEE-EECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             CCCcEEEEEe-eccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC
Confidence            5999999988 4566677888888653222      22468899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.++|+|||++....
T Consensus       157 ~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A          157 NTVKIGDFGLATEKS  171 (289)
T ss_dssp             TEEEECCCC------
T ss_pred             CCEEEccceeccccc
Confidence            999999999987554

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.70  E-value=6.2e-17  Score=100.57  Aligned_cols=91  Identities=13%  Similarity=0.144  Sum_probs=78.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCe
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNL   71 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~ni   71 (101)
                      ..|||++.++..+...+..+.++++......         ....+++..+..++.+++.|+.++|+. +++|+|++|+||
T Consensus        78 ~~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NI  157 (327)
T 3aln_A           78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNI  157 (327)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGE
T ss_pred             CCCCcEeeeeeEEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHE
Confidence            4699999999999999999999998664311         135688999999999999999999998 999999999999


Q ss_pred             EEeeCCCeEEEeeceeccccC
Q psy7276          72 LLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +++.++.++|+|||+++....
T Consensus       158 ll~~~~~~kl~Dfg~~~~~~~  178 (327)
T 3aln_A          158 LLDRSGNIKLCDFGISGQLVD  178 (327)
T ss_dssp             EEETTTEEEECCCSSSCC---
T ss_pred             EEcCCCCEEEccCCCceeccc
Confidence            999999999999999876543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.70  E-value=1.1e-16  Score=97.52  Aligned_cols=90  Identities=28%  Similarity=0.366  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+......+.++++.....+     ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.++
T Consensus        66 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  145 (283)
T 3bhy_A           66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN  145 (283)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             CCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC
Confidence            599999999999999999999998643222     235689999999999999999999999999999999999998876


Q ss_pred             ----CeEEEeeceeccccC
Q psy7276          78 ----DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ----~~~i~dfgl~~~~~~   92 (101)
                          .++|+|||++.....
T Consensus       146 ~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A          146 VPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             SSSCCEEECCCTTCEECC-
T ss_pred             CCCCceEEEecccceeccC
Confidence                799999999876544

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.69  E-value=6.1e-17  Score=104.00  Aligned_cols=89  Identities=25%  Similarity=0.345  Sum_probs=73.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+.. +.++.+++++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       198 ~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~  276 (419)
T 3i6u_A          198 NHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE  276 (419)
T ss_dssp             CCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred             CCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC
Confidence            69999999887754 557889998644222     235689999999999999999999999999999999999997544


Q ss_pred             ---CeEEEeeceeccccC
Q psy7276          78 ---DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ---~~~i~dfgl~~~~~~   92 (101)
                         .++|+|||+++....
T Consensus       277 ~~~~~kl~DFG~a~~~~~  294 (419)
T 3i6u_A          277 EDCLIKITDFGHSKILGE  294 (419)
T ss_dssp             SSCCEEECCSSTTTSCC-
T ss_pred             CcceEEEeecccceecCC
Confidence               599999999986544

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.69  E-value=8.1e-17  Score=102.66  Aligned_cols=92  Identities=13%  Similarity=0.176  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCC--ceEEEeeccccccc----cc----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHSTKE--SLVSFREYSDSHRT----KY----QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~--~l~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+....  .++.+++++....+    ..    ..+++..+..++.+++.|+.|+|+++++|+|+||+||+
T Consensus        65 ~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  144 (396)
T 4eut_A           65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM  144 (396)
T ss_dssp             CCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             CCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEE
Confidence            5999999998887654  67899998653211    11    23899999999999999999999999999999999999


Q ss_pred             E----eeCCCeEEEeeceeccccCcc
Q psy7276          73 L----NTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        73 ~----~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      +    +.++.++|+|||+++......
T Consensus       145 l~~~~~~~~~~kL~DFG~a~~~~~~~  170 (396)
T 4eut_A          145 RVIGEDGQSVYKLTDFGAARELEDDE  170 (396)
T ss_dssp             EEECTTSCEEEEECCGGGCEECCCGG
T ss_pred             EeecCCCceeEEEecCCCceEccCCC
Confidence            8    555669999999998765543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.69  E-value=5.2e-17  Score=105.16  Aligned_cols=89  Identities=21%  Similarity=0.261  Sum_probs=73.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+.. +.+++++++.....+    .   ...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.
T Consensus       237 ~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~  315 (452)
T 1fmk_A          237 RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE  315 (452)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             CCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECC
Confidence            59999999988766 678899998654211    1   134889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||+++....
T Consensus       316 ~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          316 NLVCKVADFGLARLIED  332 (452)
T ss_dssp             GGCEEECCCCTTC----
T ss_pred             CCCEEECCCccceecCC
Confidence            99999999999886543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.69  E-value=3.5e-17  Score=102.87  Aligned_cols=89  Identities=28%  Similarity=0.410  Sum_probs=71.9

Q ss_pred             cccceeEEEEEee-----CCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           3 FHQDQITIEIRHS-----TKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         3 ~h~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      .|||++.++..+.     ....++.++++......     ....+++..+..++.|++.|+.|+|+++++|+|++|+||+
T Consensus        87 ~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL  166 (362)
T ss_dssp             CCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             CCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEE
Confidence            5999999988874     33467889998654322     1235899999999999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceecccc
Q psy7276          73 LNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++.++.++|+|||++....
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~  185 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDT  185 (362)
T ss_dssp             ECTTCCEEECCTTC-----
T ss_pred             EcCCCCEEEEecCcccccc
Confidence            9999999999999987543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.69  E-value=9.9e-17  Score=100.65  Aligned_cols=91  Identities=26%  Similarity=0.313  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCc-------eEEEeeccccccc--------cccCCCHHHHHHHHHHHHHHHHHHH--HCCceecc
Q psy7276           3 FHQDQITIEIRHSTKES-------LVSFREYSDSHRT--------KYQRLSNDHICYFLYQILRGLKYIH--SANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~h--~~~i~~~~   65 (101)
                      .|||++.++..+...+.       ++.++++......        ....+++..+..++.+++.|+.++|  +.+++|+|
T Consensus        77 ~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~D  156 (360)
T 3e3p_A           77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRD  156 (360)
T ss_dssp             CCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSC
T ss_pred             CCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCc
Confidence            69999999988865443       7788888654321        2346788899999999999999999  99999999


Q ss_pred             CCCCCeEEee-CCCeEEEeeceeccccCc
Q psy7276          66 LKPSNLLLNT-TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        66 lk~~nil~~~-~~~~~i~dfgl~~~~~~~   93 (101)
                      +||+||+++. ++.++|+|||++..+...
T Consensus       157 lkp~NIll~~~~~~~kl~Dfg~a~~~~~~  185 (360)
T 3e3p_A          157 IKPHNVLVNEADGTLKLCDFGSAKKLSPS  185 (360)
T ss_dssp             CCGGGEEEETTTTEEEECCCTTCBCCCTT
T ss_pred             CCHHHEEEeCCCCcEEEeeCCCceecCCC
Confidence            9999999997 889999999999876543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.69  E-value=5.3e-17  Score=102.10  Aligned_cols=88  Identities=19%  Similarity=0.284  Sum_probs=77.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.+++.|+.++|+. +++|+|++|+||+++.+
T Consensus        89 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~  168 (360)
T 3eqc_A           89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  168 (360)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT
T ss_pred             CCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCC
Confidence            699999999999999999999998754222     225688999999999999999999986 99999999999999999


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||++..+
T Consensus       169 ~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          169 GEIKLCDFGVSGQL  182 (360)
T ss_dssp             CCEEECCCCCCHHH
T ss_pred             CCEEEEECCCCccc
Confidence            99999999988654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.69  E-value=5.5e-17  Score=101.85  Aligned_cols=89  Identities=35%  Similarity=0.547  Sum_probs=75.3

Q ss_pred             cccceeEEEEEeeCCCc------eEEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKES------LVSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~------l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...+.      ++.++++.......  ...+++..+..++.|++.|+.++|+++++|+|++|+||+++
T Consensus        81 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~  160 (353)
T 3coi_A           81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN  160 (353)
T ss_dssp             CCTTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC
T ss_pred             CCCCcccHhheEecccccccceeEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC
Confidence            59999999999887654      38888886543332  24588999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||++....
T Consensus       161 ~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          161 EDCELKILDFGLARHAD  177 (353)
T ss_dssp             TTCCEEECSTTCTTC--
T ss_pred             CCCcEEEeecccccCCC
Confidence            99999999999987644

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.69  E-value=6e-17  Score=99.95  Aligned_cols=92  Identities=18%  Similarity=0.342  Sum_probs=75.7

Q ss_pred             CcccceeEEEEEeeCCC-ceEEEeeccccccc----cc-----------------cCCCHHHHHHHHHHHHHHHHHHHHC
Q psy7276           2 GFHQDQITIEIRHSTKE-SLVSFREYSDSHRT----KY-----------------QRLSNDHICYFLYQILRGLKYIHSA   59 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~-~l~~~~~~~~~~~~----~~-----------------~~~~~~~~~~~~~~i~~~l~~~h~~   59 (101)
                      ..|||++.++..+...+ .++.+++++....+    ..                 ..+++..+..++.+++.|+.++|+.
T Consensus        88 ~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  167 (316)
T 2xir_A           88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR  167 (316)
T ss_dssp             CCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            36899999999887654 58888988653211    11                 1177889999999999999999999


Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +++|+|++|+||+++.++.++|+|||+++.....
T Consensus       168 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  201 (316)
T 2xir_A          168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD  201 (316)
T ss_dssp             TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTC
T ss_pred             CcccccCccceEEECCCCCEEECCCccccccccC
Confidence            9999999999999999999999999998865443

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.69  E-value=7.7e-17  Score=100.47  Aligned_cols=92  Identities=14%  Similarity=0.126  Sum_probs=78.8

Q ss_pred             CcccceeEEEEEeeCCC----ceEEEeeccccc----cccccCCCHHHHHHHHHHHHHHHHHHH--------HCCceecc
Q psy7276           2 GFHQDQITIEIRHSTKE----SLVSFREYSDSH----RTKYQRLSNDHICYFLYQILRGLKYIH--------SANVLHRD   65 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~----~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~h--------~~~i~~~~   65 (101)
                      ..|||++.++..+....    .++.++++....    ......+++..+..++.+++.|+.++|        +.+++|+|
T Consensus        93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  172 (342)
T 1b6c_B           93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  172 (342)
T ss_dssp             CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSC
T ss_pred             cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCC
Confidence            47999999999988765    788999986542    223356889999999999999999999        89999999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ++|+||+++.++.++|+|||++......
T Consensus       173 lkp~NIll~~~~~~kL~Dfg~~~~~~~~  200 (342)
T 1b6c_B          173 LKSKNILVKKNGTCCIADLGLAVRHDSA  200 (342)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CCHHHEEECCCCCEEEEECCCceecccc
Confidence            9999999999999999999998765543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.69  E-value=5.3e-17  Score=104.76  Aligned_cols=91  Identities=21%  Similarity=0.151  Sum_probs=72.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      ..|||++.++..+.....++++++++.....     ......+..+..++.|++.|+.|+|+.+++|+|+||+||+++. 
T Consensus        75 ~~HpnIv~l~~~~~~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~  154 (432)
T 3p23_A           75 DEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP  154 (432)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCC
T ss_pred             cCCCCcCeEEEEEecCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecC
Confidence            3699999999999999999999998754322     1123445566789999999999999999999999999999953 


Q ss_pred             --C--CCeEEEeeceeccccC
Q psy7276          76 --T--CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 --~--~~~~i~dfgl~~~~~~   92 (101)
                        +  ..++|+|||+++....
T Consensus       155 ~~~~~~~~kL~DFG~a~~~~~  175 (432)
T 3p23_A          155 NAHGKIKAMISDFGLCKKLAV  175 (432)
T ss_dssp             BTTTBCCEEECCTTEEECC--
T ss_pred             CCCCceeEEEecccceeeccC
Confidence              2  3578999999986653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.69  E-value=6.3e-17  Score=106.69  Aligned_cols=89  Identities=21%  Similarity=0.261  Sum_probs=75.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+.. +.+++++|+.....+    .   ...+++..+..++.|++.|+.|+|+++++|+|++++||+++.
T Consensus       320 ~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~  398 (535)
T 2h8h_A          320 RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE  398 (535)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             CCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcC
Confidence            59999999988766 678899998654211    1   134889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||+++....
T Consensus       399 ~~~~kl~DFG~a~~~~~  415 (535)
T 2h8h_A          399 NLVCKVADFGLARLIED  415 (535)
T ss_dssp             GGCEEECCTTSTTTCCC
T ss_pred             CCcEEEcccccceecCC
Confidence            99999999999986643

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.69  E-value=4.8e-17  Score=101.25  Aligned_cols=91  Identities=16%  Similarity=0.200  Sum_probs=73.8

Q ss_pred             CcccceeEEEEEee-----CCCceEEEeecccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHC---------Ccee
Q psy7276           2 GFHQDQITIEIRHS-----TKESLVSFREYSDSHR----TKYQRLSNDHICYFLYQILRGLKYIHSA---------NVLH   63 (101)
Q Consensus         2 ~~h~~~~~~~~~~~-----~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~---------~i~~   63 (101)
                      ..|||++.++..+.     ....+++++|++....    ......++.....++.|++.|+.|+|+.         +++|
T Consensus        64 ~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH  143 (336)
T 3g2f_A           64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISH  143 (336)
T ss_dssp             CCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEEC
T ss_pred             ccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceee
Confidence            46999999986432     2335678899864422    2334568888999999999999999999         9999


Q ss_pred             ccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          64 RDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        64 ~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +|+||+||+++.++.++|+|||+++.+..
T Consensus       144 ~Dikp~Nill~~~~~~kL~DFG~a~~~~~  172 (336)
T 3g2f_A          144 RDLNSRNVLVKNDGTCVISDFGLSMRLTG  172 (336)
T ss_dssp             SSCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cccccceEEEcCCCcEEEeeccceeeccc
Confidence            99999999999999999999999986643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.69  E-value=1.7e-16  Score=98.47  Aligned_cols=90  Identities=23%  Similarity=0.357  Sum_probs=75.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.... .+.++++.....+     ....+++..+..++.|++.|+.++|+++++|+|++|+||+++.++
T Consensus        73 ~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~  151 (322)
T 2ycf_A           73 NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE  151 (322)
T ss_dssp             CCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS
T ss_pred             CCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC
Confidence            5999999998887654 7889998644222     235688999999999999999999999999999999999998765


Q ss_pred             C---eEEEeeceeccccCc
Q psy7276          78 D---LKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~---~~i~dfgl~~~~~~~   93 (101)
                      .   ++|+|||++......
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~  170 (322)
T 2ycf_A          152 EDCLIKITDFGHSKILGET  170 (322)
T ss_dssp             SSCCEEECCCTTCEECCCC
T ss_pred             CCCeEEEccCccceecccc
Confidence            4   999999998866543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.69  E-value=1.4e-17  Score=105.50  Aligned_cols=53  Identities=15%  Similarity=0.168  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          39 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        39 ~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +.....++.|++.|+.|+|+++++|+|+||+||+++.++.++|+|||+++...
T Consensus       205 ~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~  257 (377)
T 3byv_A          205 HHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG  257 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecC
Confidence            36777899999999999999999999999999999999999999999988543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.69  E-value=1.5e-16  Score=97.22  Aligned_cols=90  Identities=20%  Similarity=0.182  Sum_probs=75.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.... .+.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++.+
T Consensus        79 ~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~  157 (291)
T 1u46_A           79 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR  157 (291)
T ss_dssp             CCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET
T ss_pred             CCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCC
Confidence            5999999999888765 7788887543211      12458899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++|+|||++......
T Consensus       158 ~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A          158 DLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             TEEEECCCTTCEECCC-
T ss_pred             CCEEEcccccccccccc
Confidence            99999999998766443

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.69  E-value=1.5e-16  Score=99.00  Aligned_cols=91  Identities=18%  Similarity=0.233  Sum_probs=75.7

Q ss_pred             cccceeEEEEEeeCCC--ceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE--SLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~--~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.+...+...+  .++.++++.....+      ....+++..+..++.+++.|+.++|+.+++|+|++|+||+++
T Consensus       100 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~  179 (326)
T 2w1i_A          100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE  179 (326)
T ss_dssp             CCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE
T ss_pred             CCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc
Confidence            5999999998876543  67889988644222      124588999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++......
T Consensus       180 ~~~~~kL~Dfg~~~~~~~~  198 (326)
T 2w1i_A          180 NENRVKIGDFGLTKVLPQD  198 (326)
T ss_dssp             ETTEEEECCCTTCEECCSS
T ss_pred             CCCcEEEecCcchhhcccc
Confidence            9999999999998876544

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.68  E-value=1.3e-16  Score=97.11  Aligned_cols=91  Identities=24%  Similarity=0.288  Sum_probs=75.3

Q ss_pred             cccceeEEEEEeeC----------------CCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHC
Q psy7276           3 FHQDQITIEIRHST----------------KESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSA   59 (101)
Q Consensus         3 ~h~~~~~~~~~~~~----------------~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~   59 (101)
                      .|||++.+...+..                ...++.+++++....+       ....+++..+..++.+++.|+.++|+.
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  141 (284)
T 2a19_B           62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK  141 (284)
T ss_dssp             CCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            59999999887753                4557788888654211       124688999999999999999999999


Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +++|+|++|+||+++.++.++|+|||++......
T Consensus       142 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  175 (284)
T 2a19_B          142 KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND  175 (284)
T ss_dssp             TEECSCCSGGGEEEEETTEEEECCCTTCEESSCC
T ss_pred             CeeeccCCHHHEEEcCCCCEEECcchhheecccc
Confidence            9999999999999999999999999998766543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.68  E-value=1.5e-16  Score=97.01  Aligned_cols=89  Identities=16%  Similarity=0.150  Sum_probs=73.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+..+ ..+.++++.....+      ....+++..+..++.+++.|+.++|+++++|+|++|+||+++.+
T Consensus        71 ~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~  149 (281)
T 3cc6_A           71 DHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP  149 (281)
T ss_dssp             CCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEET
T ss_pred             CCCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCC
Confidence            599999999887654 55778887543222      12458899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.++|+|||++.....
T Consensus       150 ~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A          150 ECVKLGDFGLSRYIED  165 (281)
T ss_dssp             TEEEECCCCGGGCC--
T ss_pred             CcEEeCccCCCccccc
Confidence            9999999999886544

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.68  E-value=7.5e-17  Score=99.62  Aligned_cols=90  Identities=17%  Similarity=0.201  Sum_probs=70.5

Q ss_pred             cccceeEEEEEeeCCCc-----eEEEeeccccccc-----------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q psy7276           3 FHQDQITIEIRHSTKES-----LVSFREYSDSHRT-----------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l   66 (101)
                      .|||++.++..+.....     .+.++++.....+           ....+++..+..++.+++.|+.++|+.+++|+|+
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~di  173 (313)
T 3brb_A           94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDL  173 (313)
T ss_dssp             CCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCC
T ss_pred             CCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            59999999988876543     4778887543211           2245889999999999999999999999999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +|+||+++.++.++|+|||++.....
T Consensus       174 kp~NIli~~~~~~kl~Dfg~~~~~~~  199 (313)
T 3brb_A          174 AARNCMLRDDMTVCVADFGLSKKIYS  199 (313)
T ss_dssp             SGGGEEECTTSCEEECSCSCC-----
T ss_pred             CcceEEEcCCCcEEEeecCcceeccc
Confidence            99999999999999999999876543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.68  E-value=1.9e-16  Score=98.37  Aligned_cols=90  Identities=22%  Similarity=0.300  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccc--cc----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe-e
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDS--HR----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-T   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~-~   75 (101)
                      .|||++.++..+...+.++.++++...  ..    ...+.+++..+..++.|++.|+.++|+.+++|+|++|+||+++ .
T Consensus       106 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  185 (320)
T 3a99_A          106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN  185 (320)
T ss_dssp             SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             CCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCC
Confidence            479999999999999999999998642  11    1235689999999999999999999999999999999999998 6


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++.....
T Consensus       186 ~~~~kL~Dfg~~~~~~~  202 (320)
T 3a99_A          186 RGELKLIDFGSGALLKD  202 (320)
T ss_dssp             TTEEEECCCTTCEECCS
T ss_pred             CCCEEEeeCcccccccc
Confidence            78999999999876554

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.68  E-value=1.1e-16  Score=101.35  Aligned_cols=75  Identities=24%  Similarity=0.390  Sum_probs=63.0

Q ss_pred             cccceeEEEEEee----CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHS----TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~----~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~ni   71 (101)
                      .|+|++.++..+.    .+..+++++++......      ....+++..+..++.|++.|+.|+|++ +++|+|+||+||
T Consensus        99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NI  178 (397)
T 1wak_A           99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI  178 (397)
T ss_dssp             GGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGE
T ss_pred             CcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHe
Confidence            4889999999887    56678899998644322      114589999999999999999999998 999999999999


Q ss_pred             EEeeCC
Q psy7276          72 LLNTTC   77 (101)
Q Consensus        72 l~~~~~   77 (101)
                      +++.++
T Consensus       179 ll~~~~  184 (397)
T 1wak_A          179 LLSVNE  184 (397)
T ss_dssp             EECCCH
T ss_pred             eEeccc
Confidence            998765

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.68  E-value=1.2e-16  Score=98.72  Aligned_cols=91  Identities=21%  Similarity=0.211  Sum_probs=73.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeec-ccccc-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe-e
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREY-SDSHR-----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-T   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~-~   75 (101)
                      .|||++.++..+...+..+.++++ .....     ...+.+++..+..++.+++.|+.++|+.+++|+|++++||+++ .
T Consensus        96 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  175 (312)
T 2iwi_A           96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLR  175 (312)
T ss_dssp             CCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETT
T ss_pred             CCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCC
Confidence            699999999999988888989887 22211     1235689999999999999999999999999999999999999 7


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||++......
T Consensus       176 ~~~~kl~dfg~~~~~~~~  193 (312)
T 2iwi_A          176 RGCAKLIDFGSGALLHDE  193 (312)
T ss_dssp             TTEEEECCCSSCEECCSS
T ss_pred             CCeEEEEEcchhhhcccC
Confidence            889999999998866543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.68  E-value=1.9e-16  Score=96.94  Aligned_cols=90  Identities=26%  Similarity=0.308  Sum_probs=76.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+...+.++.++++.....+    .    ...+++..+..++.+++.|+.++|+.+++|+|++|+||+++
T Consensus        77 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~  156 (295)
T 2clq_A           77 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN  156 (295)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred             CCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEE
Confidence            699999999999999999999998643211    1    12456888888999999999999999999999999999998


Q ss_pred             e-CCCeEEEeeceeccccC
Q psy7276          75 T-TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~-~~~~~i~dfgl~~~~~~   92 (101)
                      . ++.++|+|||++.....
T Consensus       157 ~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A          157 TYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             TTTCCEEECCTTTCEESCC
T ss_pred             CCCCCEEEeecccccccCC
Confidence            7 78999999999876543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.68  E-value=1.7e-16  Score=97.97  Aligned_cols=90  Identities=22%  Similarity=0.294  Sum_probs=73.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+.++.++++.....+         ....+++..+..++.+++.|+.++|+.+++|+|++|+||++
T Consensus        90 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~  169 (310)
T 2wqm_A           90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI  169 (310)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE
Confidence            599999999999999999999998654211         12458899999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccC
Q psy7276          74 NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~   92 (101)
                      +.++.++|+|||++.....
T Consensus       170 ~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          170 TATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             CTTSCEEECCC--------
T ss_pred             cCCCCEEEEeccceeeecC
Confidence            9999999999999876543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.68  E-value=1.4e-16  Score=99.51  Aligned_cols=90  Identities=22%  Similarity=0.297  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc-c---------c-c--ccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH-R---------T-K--YQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~-~---------~-~--~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~   68 (101)
                      .|||++.++..+...+.++.++++.... .         . .  ...+++..+..++.+++.|+.++|+ .+++|+|++|
T Consensus       101 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p  180 (348)
T 2pml_X          101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKP  180 (348)
T ss_dssp             CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCG
T ss_pred             CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCCh
Confidence            5999999999999999999999986441 1         1 1  3568899999999999999999999 9999999999


Q ss_pred             CCeEEeeCCCeEEEeeceeccccC
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +||+++.++.++|+|||++.....
T Consensus       181 ~Nil~~~~~~~kl~dfg~~~~~~~  204 (348)
T 2pml_X          181 SNILMDKNGRVKLSDFGESEYMVD  204 (348)
T ss_dssp             GGEEECTTSCEEECCCTTCEECBT
T ss_pred             HhEEEcCCCcEEEecccccccccc
Confidence            999999999999999999876543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.68  E-value=1.5e-16  Score=98.05  Aligned_cols=89  Identities=19%  Similarity=0.284  Sum_probs=77.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE---e
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---N   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~---~   74 (101)
                      .|||++.++..+...+.++.++++.....+     ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||++   +
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~  143 (304)
T 2jam_A           64 KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPE  143 (304)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSS
T ss_pred             CCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCC
Confidence            599999999999999999999998653222     23568999999999999999999999999999999999999   6


Q ss_pred             eCCCeEEEeeceecccc
Q psy7276          75 TTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~   91 (101)
                      .++.++|+|||++....
T Consensus       144 ~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A          144 ENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             TTCCEEBCSCSTTCCCC
T ss_pred             CCCCEEEccCCcceecC
Confidence            67889999999887543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.68  E-value=7.5e-17  Score=100.69  Aligned_cols=88  Identities=20%  Similarity=0.295  Sum_probs=73.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc---------------------------------------------ccCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK---------------------------------------------YQRL   37 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------------------------------------~~~~   37 (101)
                      .|||++.++..+...+.++.++|++....+.                                             ...+
T Consensus        86 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (345)
T 3hko_A           86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQ  165 (345)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHH
T ss_pred             CCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccc
Confidence            5999999999999999999999986432110                                             0113


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC--CeEEEeeceeccc
Q psy7276          38 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKFFFYFFFSFF   90 (101)
Q Consensus        38 ~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~--~~~i~dfgl~~~~   90 (101)
                      ++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++  .++|+|||++..+
T Consensus       166 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~  220 (345)
T 3hko_A          166 REKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF  220 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccc
Confidence            4667788999999999999999999999999999998776  8999999998754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.68  E-value=8.4e-17  Score=101.69  Aligned_cols=75  Identities=11%  Similarity=-0.037  Sum_probs=58.3

Q ss_pred             ceEEEeeccccccc---c--ccCCCHHHH------HHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeecee
Q psy7276          19 SLVSFREYSDSHRT---K--YQRLSNDHI------CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF   87 (101)
Q Consensus        19 ~l~~~~~~~~~~~~---~--~~~~~~~~~------~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~   87 (101)
                      .+++++|++.....   .  ...+.+...      ..++.|++.|+.|+|+++++|+|+||+||+++.++.++|+|||++
T Consensus       162 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a  241 (371)
T 3q60_A          162 NYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSAL  241 (371)
T ss_dssp             EEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGE
T ss_pred             eEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEeccee
Confidence            37888888653222   1  123444444      566799999999999999999999999999999999999999999


Q ss_pred             ccccCc
Q psy7276          88 SFFFHF   93 (101)
Q Consensus        88 ~~~~~~   93 (101)
                      +.....
T Consensus       242 ~~~~~~  247 (371)
T 3q60_A          242 WKVGTR  247 (371)
T ss_dssp             EETTCE
T ss_pred             eecCCC
Confidence            866543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=98.46  Aligned_cols=91  Identities=18%  Similarity=0.185  Sum_probs=75.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+...+.++.++++......     ....+++..+..++.+++.|+.++|.. +++|+|++|+||+++.
T Consensus        81 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~  160 (318)
T 2dyl_A           81 HDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE  160 (318)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECT
T ss_pred             cCCCceeeEEEEEecCCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECC
Confidence            3699999999999999999999998632111     125689999999999999999999995 9999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++..+..
T Consensus       161 ~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          161 RGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             TSCEEECCCTTC-----
T ss_pred             CCCEEEEECCCchhccC
Confidence            99999999999875543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.67  E-value=1.8e-16  Score=98.34  Aligned_cols=90  Identities=26%  Similarity=0.361  Sum_probs=74.8

Q ss_pred             CcccceeEEEEEeeC------CCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           2 GFHQDQITIEIRHST------KESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~------~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      ..|||++.++..+..      .+.++.++++.....+       ....+++..+..++.+++.|+.++|+.+++|+|++|
T Consensus        78 ~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp  157 (326)
T 2x7f_A           78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKG  157 (326)
T ss_dssp             CCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSG
T ss_pred             cCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcH
Confidence            369999999988876      4678899998654211       124688999999999999999999999999999999


Q ss_pred             CCeEEeeCCCeEEEeeceecccc
Q psy7276          69 SNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        69 ~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +||+++.++.++|+|||++....
T Consensus       158 ~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          158 QNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             GGEEECTTCCEEECCCTTTC---
T ss_pred             HHEEEcCCCCEEEeeCcCceecC
Confidence            99999999999999999887654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.67  E-value=2.8e-16  Score=95.65  Aligned_cols=89  Identities=22%  Similarity=0.330  Sum_probs=74.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc---cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY---QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+. .+..+.++++.....+    ..   ..+++..+..++.+++.|+.++|+++++|+|++|+||+++.
T Consensus        66 ~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~  144 (279)
T 1qpc_A           66 QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD  144 (279)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC
Confidence            5999999998776 4567888888643222    11   25889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++|+|||++.....
T Consensus       145 ~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A          145 TLSCKIADFGLARLIED  161 (279)
T ss_dssp             TSCEEECCCTTCEECSS
T ss_pred             CCCEEECCCcccccccC
Confidence            99999999999886654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.67  E-value=2.4e-16  Score=97.25  Aligned_cols=90  Identities=38%  Similarity=0.508  Sum_probs=73.7

Q ss_pred             cccceeEEEEEee--------------CCCceEEEeecccccc---ccccCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q psy7276           3 FHQDQITIEIRHS--------------TKESLVSFREYSDSHR---TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRD   65 (101)
Q Consensus         3 ~h~~~~~~~~~~~--------------~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~   65 (101)
                      .|||++.++..+.              ....++.++++.....   ...+.+++..+..++.|++.|+.++|+++++|+|
T Consensus        66 ~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  145 (320)
T 2i6l_A           66 DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRD  145 (320)
T ss_dssp             CCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             CCCCeeEEEEeccccccccccccccccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            5999999988763              4467788888865422   2346688999999999999999999999999999


Q ss_pred             CCCCCeEEee-CCCeEEEeeceeccccC
Q psy7276          66 LKPSNLLLNT-TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        66 lk~~nil~~~-~~~~~i~dfgl~~~~~~   92 (101)
                      ++|+||+++. ++.++|+|||+++...+
T Consensus       146 lkp~Nil~~~~~~~~kl~Dfg~~~~~~~  173 (320)
T 2i6l_A          146 LKPANLFINTEDLVLKIGDFGLARIMDP  173 (320)
T ss_dssp             CSGGGEEEETTTTEEEECCCTTCBCC--
T ss_pred             CCHHHEEEcCCCCeEEEccCccccccCC
Confidence            9999999974 56899999999886543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.67  E-value=1.5e-16  Score=98.38  Aligned_cols=87  Identities=17%  Similarity=0.285  Sum_probs=72.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.....+    .  ...+++..+..++.+++.|+.++|+++++|+|++|+||+++ +
T Consensus        87 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~  165 (319)
T 2y4i_B           87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-N  165 (319)
T ss_dssp             CCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--
T ss_pred             CCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-C
Confidence            699999999999999999999998653222    1  13588899999999999999999999999999999999998 6


Q ss_pred             CCeEEEeeceeccc
Q psy7276          77 CDLKFFFYFFFSFF   90 (101)
Q Consensus        77 ~~~~i~dfgl~~~~   90 (101)
                      +.++|+|||++...
T Consensus       166 ~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          166 GKVVITDFGLFSIS  179 (319)
T ss_dssp             -CCEECCCSCCC--
T ss_pred             CCEEEeecCCcccc
Confidence            79999999987644

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.67  E-value=7.5e-17  Score=103.98  Aligned_cols=91  Identities=22%  Similarity=0.214  Sum_probs=71.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc---cccC-C-------CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT---KYQR-L-------SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~-~-------~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+...+.+++++|++.....   .... .       .+..+..++.|++.|+.|+|+++++|+|+||+||
T Consensus        67 ~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NI  146 (434)
T 2rio_A           67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNI  146 (434)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred             CCCCcCeEEEEEecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhE
Confidence            699999999999999999999998754321   1111 1       2234567999999999999999999999999999


Q ss_pred             EEeeC-------------CCeEEEeeceeccccCc
Q psy7276          72 LLNTT-------------CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        72 l~~~~-------------~~~~i~dfgl~~~~~~~   93 (101)
                      +++.+             ..++|+|||+++.+...
T Consensus       147 Ll~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~  181 (434)
T 2rio_A          147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG  181 (434)
T ss_dssp             EEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-
T ss_pred             EEecCcccccccccCCCceEEEEcccccceecCCC
Confidence            99754             37999999999876554

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.66  E-value=4e-16  Score=95.49  Aligned_cols=90  Identities=21%  Similarity=0.310  Sum_probs=74.5

Q ss_pred             cccceeEEEEEeeC----CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHST----KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~ni   71 (101)
                      .|||++.++..+..    ...++.++++.....+     ....+++..+..++.+++.|+.++|+.+  ++|+|++|+||
T Consensus        83 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Ni  162 (290)
T 1t4h_A           83 QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI  162 (290)
T ss_dssp             CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGE
T ss_pred             CCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHE
Confidence            59999999987764    4557888888644222     2256889999999999999999999999  99999999999


Q ss_pred             EEe-eCCCeEEEeeceeccccC
Q psy7276          72 LLN-TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        72 l~~-~~~~~~i~dfgl~~~~~~   92 (101)
                      +++ .++.++|+|||++.....
T Consensus       163 l~~~~~~~~kl~Dfg~~~~~~~  184 (290)
T 1t4h_A          163 FITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EESSTTSCEEECCTTGGGGCCT
T ss_pred             EEECCCCCEEEeeCCCcccccc
Confidence            997 788999999999865443

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.66  E-value=3e-16  Score=97.01  Aligned_cols=88  Identities=25%  Similarity=0.283  Sum_probs=73.8

Q ss_pred             cccceeEEEEEee----CCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           3 FHQDQITIEIRHS----TKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         3 ~h~~~~~~~~~~~----~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      .|||++.++..+.    ....++.++++.....+         ....+++..+..++.|++.|+.++|+++++|+|++|+
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~  163 (317)
T 2buj_A           84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPT  163 (317)
T ss_dssp             CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence            6999999988776    34567788887654211         1256899999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceeccc
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~   90 (101)
                      ||+++.++.++|+|||++...
T Consensus       164 NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          164 NILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             GEEECTTSCEEECCCSSCEES
T ss_pred             HEEEcCCCCEEEEecCcchhc
Confidence            999999999999999987654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.65  E-value=8e-16  Score=94.08  Aligned_cols=91  Identities=26%  Similarity=0.443  Sum_probs=77.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~-   76 (101)
                      .|||++.++..+...+.++.++++.....+     ....+++..+..++.+++.|+.++|+++++|+|++|+||+++.+ 
T Consensus        79 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~  158 (287)
T 2wei_A           79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE  158 (287)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS
T ss_pred             cCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC
Confidence            699999999999999999999998643222     23568999999999999999999999999999999999999764 


Q ss_pred             --CCeEEEeeceeccccCc
Q psy7276          77 --CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 --~~~~i~dfgl~~~~~~~   93 (101)
                        +.++|+|||++......
T Consensus       159 ~~~~~kL~Dfg~~~~~~~~  177 (287)
T 2wei_A          159 KDCDIKIIDFGLSTCFQQN  177 (287)
T ss_dssp             TTCCEEECSTTGGGTBCCC
T ss_pred             CcccEEEeccCcceeecCC
Confidence              46999999998865543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.65  E-value=3.5e-16  Score=95.78  Aligned_cols=89  Identities=26%  Similarity=0.343  Sum_probs=73.6

Q ss_pred             cccceeEEEEEeeC-------------CCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q psy7276           3 FHQDQITIEIRHST-------------KESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLH   63 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~   63 (101)
                      .|||++.++..+..             .+.++.++++.....+      ....+++..+..++.|++.|+.++|+++++|
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H  139 (303)
T 1zy4_A           60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIH  139 (303)
T ss_dssp             CCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeec
Confidence            59999999887754             4567788888643211      1234678888899999999999999999999


Q ss_pred             ccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          64 RDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        64 ~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      +|++|+||+++.++.++|+|||++....
T Consensus       140 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A          140 RDLKPMNIFIDESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             SCCCGGGEEECTTSCEEECCCCCCSCTT
T ss_pred             ccCCHHhEEEcCCCCEEEeeCcchhhcc
Confidence            9999999999999999999999987654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.65  E-value=7.3e-16  Score=95.64  Aligned_cols=90  Identities=20%  Similarity=0.223  Sum_probs=75.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      .|++++.++..+...+.++.++++......    ..  ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++. 
T Consensus        75 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  154 (339)
T 1z57_A           75 STFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQS  154 (339)
T ss_dssp             CTTCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCC
T ss_pred             CceeeEeeecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecc
Confidence            355789999999999999999998743322    11  25789999999999999999999999999999999999987 


Q ss_pred             ------------------CCCeEEEeeceeccccC
Q psy7276          76 ------------------TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ------------------~~~~~i~dfgl~~~~~~   92 (101)
                                        ++.++|+|||++.....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  189 (339)
T 1z57_A          155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE  189 (339)
T ss_dssp             CEEEEEC----CEEEEESCCCEEECCCSSCEETTS
T ss_pred             ccccccCCccccccccccCCCceEeeCcccccCcc
Confidence                              56799999999876443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.65  E-value=9e-16  Score=93.72  Aligned_cols=88  Identities=17%  Similarity=0.226  Sum_probs=72.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+....  +.++++.....+      ....+++.....++.+++.|+.++|+.+  ++|+|++|+||+++
T Consensus        81 ~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~  158 (287)
T 4f0f_A           81 NHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ  158 (287)
T ss_dssp             CCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEES
T ss_pred             CCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEe
Confidence            5999999999887765  467887543211      2246889999999999999999999999  99999999999998


Q ss_pred             eCCC-----eEEEeeceeccccC
Q psy7276          75 TTCD-----LKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~-----~~i~dfgl~~~~~~   92 (101)
                      .++.     ++|+|||+++....
T Consensus       159 ~~~~~~~~~~kl~Dfg~~~~~~~  181 (287)
T 4f0f_A          159 SLDENAPVCAKVADFGLSQQSVH  181 (287)
T ss_dssp             CCCTTCSCCEEECCCTTCBCCSS
T ss_pred             ccCCCCceeEEeCCCCccccccc
Confidence            7776     99999999875443

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.65  E-value=7.6e-16  Score=100.67  Aligned_cols=90  Identities=16%  Similarity=0.205  Sum_probs=73.3

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE---ee
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NT   75 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~---~~   75 (101)
                      ++++..+...+......+++++++.....     ....+++..+..++.|++.|+.|+|.++++|+|+||+|||+   +.
T Consensus        62 ~~~i~~i~~~~~~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~  141 (483)
T 3sv0_A           62 GTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR  141 (483)
T ss_dssp             STTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG
T ss_pred             CCCCCeEEEEEeeCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCC
Confidence            45566666666777788889988633221     13568999999999999999999999999999999999999   57


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.++|+|||+++.+...
T Consensus       142 ~~~vkL~DFGla~~~~~~  159 (483)
T 3sv0_A          142 ANQVYIIDFGLAKKYRDT  159 (483)
T ss_dssp             TTCEEECCCTTCEECBCT
T ss_pred             CCeEEEEeCCcceeccCC
Confidence            789999999999876554

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.65  E-value=3.7e-16  Score=97.76  Aligned_cols=91  Identities=22%  Similarity=0.252  Sum_probs=73.3

Q ss_pred             CcccceeEEEEEeeC----CCceEEEeeccccccc----c---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           2 GFHQDQITIEIRHST----KESLVSFREYSDSHRT----K---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      ..|||++.++..+..    ...++.+++++....+    .   ...+++..+..++.|++.|+.|+|+++++|+|++|+|
T Consensus        79 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~N  158 (336)
T 3fhr_A           79 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN  158 (336)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            368999999988865    4457889998654221    1   1358999999999999999999999999999999999


Q ss_pred             eEEeeC---CCeEEEeeceeccccC
Q psy7276          71 LLLNTT---CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        71 il~~~~---~~~~i~dfgl~~~~~~   92 (101)
                      |+++.+   +.++|+|||++.....
T Consensus       159 Ill~~~~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          159 LLYTSKEKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             EEESCSSTTCCEEECCCTTCEEC--
T ss_pred             EEEEecCCCceEEEeccccceeccc
Confidence            999764   4599999999876543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.65  E-value=4.1e-16  Score=96.97  Aligned_cols=88  Identities=16%  Similarity=0.079  Sum_probs=74.6

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cc--------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KY--------QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~--------~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      .|||++.++..+...+..+.++++.....+    ..        ..+++..+..++.+++.|+.++|+.+++|+|++|+|
T Consensus        91 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~N  170 (327)
T 2yfx_A           91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN  170 (327)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             CCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhH
Confidence            699999999999999999999998643211    11        347888999999999999999999999999999999


Q ss_pred             eEEeeC---CCeEEEeeceeccc
Q psy7276          71 LLLNTT---CDLKFFFYFFFSFF   90 (101)
Q Consensus        71 il~~~~---~~~~i~dfgl~~~~   90 (101)
                      |+++.+   ..++|+|||++...
T Consensus       171 Ili~~~~~~~~~kl~Dfg~~~~~  193 (327)
T 2yfx_A          171 CLLTCPGPGRVAKIGDFGMARDI  193 (327)
T ss_dssp             EEESCSSTTCCEEECCCHHHHHH
T ss_pred             EEEecCCCcceEEECcccccccc
Confidence            999854   45999999988754

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.64  E-value=4.2e-16  Score=94.90  Aligned_cols=90  Identities=19%  Similarity=0.206  Sum_probs=70.2

Q ss_pred             cccceeEEEEEeeC-CCceEEEeeccccccc----cc---cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST-KESLVSFREYSDSHRT----KY---QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+.. .+.++.++++.....+    ..   ..+++..+..++.+++.|+.++|+++++|+|++|+||+++
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~  151 (278)
T 1byg_A           72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS  151 (278)
T ss_dssp             CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe
Confidence            59999999998654 4578899998654222    11   2378888999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++|+|||++.....
T Consensus       152 ~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A          152 EDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             TTSCEEECCCCC------
T ss_pred             CCCcEEEeeccccccccc
Confidence            999999999999875543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.64  E-value=8.5e-16  Score=94.40  Aligned_cols=84  Identities=11%  Similarity=-0.037  Sum_probs=71.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK---YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL   79 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~   79 (101)
                      .|||++.++..+...+..+.++|+.....+.   .....+..+..++.|++.|+.|+|+++++|+|+||+||+++.++.+
T Consensus        89 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~  168 (286)
T 3uqc_A           89 DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDV  168 (286)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCE
T ss_pred             CCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCE
Confidence            6999999999999999999999986542221   1234566788899999999999999999999999999999999999


Q ss_pred             EEEeece
Q psy7276          80 KFFFYFF   86 (101)
Q Consensus        80 ~i~dfgl   86 (101)
                      +|++++.
T Consensus       169 kl~~~~~  175 (286)
T 3uqc_A          169 VLAYPAT  175 (286)
T ss_dssp             EECSCCC
T ss_pred             EEEeccc
Confidence            9987664

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.64  E-value=8.5e-16  Score=94.96  Aligned_cols=88  Identities=18%  Similarity=0.195  Sum_probs=73.9

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCe
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL   79 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~   79 (101)
                      |||++.++..+...+.+++++++......    ..+.+++..+..++.+++.|+.++|+.+++|+|++|+||+++ ++.+
T Consensus        87 ~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~  165 (313)
T 3cek_A           87 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGML  165 (313)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEE
T ss_pred             CCceEEEEEEeecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeE
Confidence            69999999999999999999996433221    235688999999999999999999999999999999999995 5889


Q ss_pred             EEEeeceeccccC
Q psy7276          80 KFFFYFFFSFFFH   92 (101)
Q Consensus        80 ~i~dfgl~~~~~~   92 (101)
                      +|+|||++..+..
T Consensus       166 kL~Dfg~~~~~~~  178 (313)
T 3cek_A          166 KLIDFGIANQMQP  178 (313)
T ss_dssp             EECCCSSSCC---
T ss_pred             EEeeccccccccC
Confidence            9999999886544

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.64  E-value=5.6e-16  Score=94.23  Aligned_cols=90  Identities=27%  Similarity=0.335  Sum_probs=73.8

Q ss_pred             cccceeEEEEEee--CCCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccC
Q psy7276           3 FHQDQITIEIRHS--TKESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSAN-----VLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~--~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~-----i~~~~l   66 (101)
                      .|||++.++..+.  ..+.++.++++.....+         ....+++..+..++.+++.|+.++|+.+     ++|+|+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl  142 (279)
T 2w5a_A           63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL  142 (279)
T ss_dssp             CCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCC
T ss_pred             CCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEecc
Confidence            5999999998764  46788899998654211         1123889999999999999999999999     999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +|+||+++.++.++|+|||++.....
T Consensus       143 ~p~NIl~~~~~~~kl~dfg~~~~~~~  168 (279)
T 2w5a_A          143 KPANVFLDGKQNVKLGDFGLARILNH  168 (279)
T ss_dssp             SGGGEEECSSSCEEECCCCHHHHC--
T ss_pred             chhhEEEcCCCCEEEecCchheeecc
Confidence            99999999999999999999876544

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.63  E-value=1.3e-15  Score=93.14  Aligned_cols=90  Identities=20%  Similarity=0.208  Sum_probs=71.4

Q ss_pred             ccc-eeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE---e
Q psy7276           4 HQD-QITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---N   74 (101)
Q Consensus         4 h~~-~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~---~   74 (101)
                      |++ +..+...+......+.++++......     ....+++..+..++.|++.|+.|+|+.+++|+|++|+||++   +
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~  142 (296)
T 4hgt_A           63 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK  142 (296)
T ss_dssp             TSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGG
T ss_pred             CCCCCCeeeeecCCCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccC
Confidence            444 44445555677777888888633211     13568999999999999999999999999999999999999   6


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||+++.....
T Consensus       143 ~~~~~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A          143 KGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             GTTCEEECCCTTCEECBCT
T ss_pred             CCCeEEEecCccceeccCc
Confidence            7889999999998866543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.63  E-value=2.5e-16  Score=98.89  Aligned_cols=84  Identities=11%  Similarity=0.083  Sum_probs=67.9

Q ss_pred             EEEEeeC-CCceEEEeeccccccc----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC--CeE
Q psy7276          10 IEIRHST-KESLVSFREYSDSHRT----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLK   80 (101)
Q Consensus        10 ~~~~~~~-~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~--~~~   80 (101)
                      ++..+.. .+.++++++++.....    .  ...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++  .++
T Consensus       122 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~k  201 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVT  201 (352)
T ss_dssp             CCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEE
T ss_pred             hhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEE
Confidence            4444443 6777888888632211    1  25689999999999999999999999999999999999999887  899


Q ss_pred             EEeeceeccccCc
Q psy7276          81 FFFYFFFSFFFHF   93 (101)
Q Consensus        81 i~dfgl~~~~~~~   93 (101)
                      |+|||+++.+...
T Consensus       202 l~Dfg~a~~~~~~  214 (352)
T 2jii_A          202 LAGYGFAFRYCPS  214 (352)
T ss_dssp             ECCGGGCBCSSGG
T ss_pred             EecCcceeeccCC
Confidence            9999999766543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.63  E-value=1.9e-15  Score=91.33  Aligned_cols=88  Identities=8%  Similarity=0.138  Sum_probs=75.0

Q ss_pred             cccceeEEEEEeeCC--CceEEEeeccccccc----cc---cCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDSHRT----KY---QRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~ni   71 (101)
                      .|||++.++..+...  +.++.++++.....+    ..   ..+++..+..++.|++.|+.|+|+.+  ++|+|++|+||
T Consensus        65 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Ni  144 (271)
T 3kmu_A           65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSV  144 (271)
T ss_dssp             SCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGE
T ss_pred             CCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceE
Confidence            599999999999876  778899998654222    11   24899999999999999999999999  99999999999


Q ss_pred             EEeeCCCeEEEeeceeccc
Q psy7276          72 LLNTTCDLKFFFYFFFSFF   90 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~   90 (101)
                      +++.++.+++.||+++...
T Consensus       145 l~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A          145 MIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             EECTTSCEEEEGGGSCCTT
T ss_pred             EEcCCcceeEEeccceeee
Confidence            9999999999998876543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.62  E-value=2.3e-15  Score=93.97  Aligned_cols=88  Identities=17%  Similarity=0.241  Sum_probs=73.6

Q ss_pred             cceeEEEEEeeCCCceEEEeecccccccc------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE-----
Q psy7276           5 QDQITIEIRHSTKESLVSFREYSDSHRTK------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL-----   73 (101)
Q Consensus         5 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~-----   73 (101)
                      ..++.+...+...+.+++++++.......      ...+++..+..++.|++.|+.++|+++++|+|+||+||++     
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~  161 (355)
T 2eu9_A           82 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF  161 (355)
T ss_dssp             SCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCE
T ss_pred             eeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccc
Confidence            34788888888889999999986543221      1358899999999999999999999999999999999999     


Q ss_pred             --------------eeCCCeEEEeeceeccccC
Q psy7276          74 --------------NTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        74 --------------~~~~~~~i~dfgl~~~~~~   92 (101)
                                    +.++.++|+|||+++....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  194 (355)
T 2eu9_A          162 ETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE  194 (355)
T ss_dssp             EEEECCC-CCCEEEESCCCEEECCCTTCEETTS
T ss_pred             cccccccccccccccCCCcEEEeecCccccccc
Confidence                          5678899999999875443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.62  E-value=4.2e-16  Score=103.00  Aligned_cols=86  Identities=16%  Similarity=0.103  Sum_probs=66.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEE
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFF   82 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~   82 (101)
                      .|||++.....+......++++|++....+... +..  ...++.|++.++.|+|+++++|+|+||+||+++.  .++|+
T Consensus       397 ~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~-l~~--~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~  471 (540)
T 3en9_A          397 KDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDV-IED--NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYII  471 (540)
T ss_dssp             GGGTCCCCCEEEEETTTTEEEEECCCSEEHHHH-STT--CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEEC
T ss_pred             CCCCcCceEEEEEeCCccEEEEECCCCCCHHHH-HHH--HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEE
Confidence            699999444444466667899998754322111 111  5678999999999999999999999999999998  99999


Q ss_pred             eeceeccccCc
Q psy7276          83 FYFFFSFFFHF   93 (101)
Q Consensus        83 dfgl~~~~~~~   93 (101)
                      |||+++.....
T Consensus       472 DFGla~~~~~~  482 (540)
T 3en9_A          472 DFGLGKISNLD  482 (540)
T ss_dssp             CCTTCEECCCH
T ss_pred             ECccCEECCCc
Confidence            99999987654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.61  E-value=2.4e-15  Score=95.41  Aligned_cols=89  Identities=17%  Similarity=0.186  Sum_probs=74.1

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCCeEEee
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIH--SANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h--~~~i~~~~lk~~nil~~~   75 (101)
                      |++++.+...+...+.+++++++......      ....+++..+..++.|++.|+.++|  ..+++|+|+||+||+++.
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~  194 (382)
T 2vx3_A          115 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN  194 (382)
T ss_dssp             GGGBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS
T ss_pred             ceeEEEeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec
Confidence            45689999999999999999998654322      1145889999999999999999999  579999999999999954


Q ss_pred             --CCCeEEEeeceeccccC
Q psy7276          76 --TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 --~~~~~i~dfgl~~~~~~   92 (101)
                        ++.++|+|||++.....
T Consensus       195 ~~~~~~kL~DFG~a~~~~~  213 (382)
T 2vx3_A          195 PKRSAIKIVDFGSSCQLGQ  213 (382)
T ss_dssp             TTSCCEEECCCTTCEETTC
T ss_pred             CCCCcEEEEeccCceeccc
Confidence              67899999999876543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.61  E-value=3.7e-15  Score=91.18  Aligned_cols=90  Identities=20%  Similarity=0.206  Sum_probs=70.8

Q ss_pred             ccc-eeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe---
Q psy7276           4 HQD-QITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---   74 (101)
Q Consensus         4 h~~-~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~---   74 (101)
                      |++ +..+..........+.++++......     ....+++..+..++.|++.|+.++|+++++|+|++|+||+++   
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~  142 (296)
T 3uzp_A           63 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK  142 (296)
T ss_dssp             TSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG
T ss_pred             cCCCCCccccccCCCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCC
Confidence            444 44444555667777888888632211     135689999999999999999999999999999999999994   


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++|+|||++......
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A          143 KGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             GTTCEEECCCTTCEECBCT
T ss_pred             CCCeEEEeeCCCccccccc
Confidence            7789999999998866543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.60  E-value=2.1e-15  Score=93.21  Aligned_cols=87  Identities=24%  Similarity=0.296  Sum_probs=67.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----c-c---cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----K-Y---QRLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~-~---~~~~~~~~~~~~~~i~~~l~~~h~---~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+.+  ..+.++++.....+    . .   ..+++..+..++.+++.|+.|+|+   ++++|+|++|+||
T Consensus        59 ~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NI  136 (307)
T 2eva_A           59 NHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL  136 (307)
T ss_dssp             CCTTBCCEEEBCTT--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGE
T ss_pred             CCCCcCeEEEEEcC--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHE
Confidence            59999999987764  46788888643222    1 1   236788899999999999999999   8999999999999


Q ss_pred             EEeeCCC-eEEEeeceecccc
Q psy7276          72 LLNTTCD-LKFFFYFFFSFFF   91 (101)
Q Consensus        72 l~~~~~~-~~i~dfgl~~~~~   91 (101)
                      +++.++. ++|+|||++....
T Consensus       137 ll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A          137 LLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             EEETTTTEEEECCCCC-----
T ss_pred             EEeCCCCEEEEcccccccccc
Confidence            9998886 7999999987544

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.59  E-value=1.2e-15  Score=96.07  Aligned_cols=90  Identities=18%  Similarity=0.206  Sum_probs=71.8

Q ss_pred             cccceeEEEEEeeCCC----ceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTKE----SLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~----~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~-~i~~~~lk~~ni   71 (101)
                      .|||++.++..+...+    .+++++++......      ....+++..+..++.|++.|+.++|++ +++|+|+||+||
T Consensus        84 ~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NI  163 (373)
T 1q8y_A           84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV  163 (373)
T ss_dssp             HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred             ccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHe
Confidence            3899999988887543    67788877533221      124588999999999999999999998 999999999999


Q ss_pred             EEeeC------CCeEEEeeceeccccC
Q psy7276          72 LLNTT------CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        72 l~~~~------~~~~i~dfgl~~~~~~   92 (101)
                      +++.+      +.++|+|||++.....
T Consensus       164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~  190 (373)
T 1q8y_A          164 LMEIVDSPENLIQIKIADLGNACWYDE  190 (373)
T ss_dssp             EEEEEETTTTEEEEEECCCTTCEETTB
T ss_pred             EEeccCCCcCcceEEEcccccccccCC
Confidence            99643      3699999999876543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.55  E-value=5.7e-15  Score=90.75  Aligned_cols=72  Identities=15%  Similarity=0.063  Sum_probs=57.1

Q ss_pred             CceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          18 ESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        18 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      +..+.++++.....+..  +.......++.+++.|+.++|+.+++|+|+||+||+++ ++.++|+|||+++...+
T Consensus       173 ~~~~lvmE~~~g~~L~~--l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~~  244 (282)
T 1zar_A          173 EGNAVLMELIDAKELYR--VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGE  244 (282)
T ss_dssp             ETTEEEEECCCCEEGGG--CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEETTS
T ss_pred             cceEEEEEecCCCcHHH--cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECCC
Confidence            45577888765433322  23344557999999999999999999999999999999 99999999999886543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.55  E-value=1.1e-14  Score=98.29  Aligned_cols=91  Identities=21%  Similarity=0.263  Sum_probs=74.5

Q ss_pred             cccceeEEEEEeeC------CCceEEEeeccccccc----c----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHST------KESLVSFREYSDSHRT----K----YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~------~~~l~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||++.++..+..      ++..+.+++++....+    .    ...+++..+..++.+++.|+.|+|+.+++|+|++|
T Consensus        70 ~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP  149 (676)
T 3qa8_A           70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKP  149 (676)
T ss_dssp             CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCS
T ss_pred             CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence            59999999887655      6677888888643221    1    12588889999999999999999999999999999


Q ss_pred             CCeEEeeCCC---eEEEeeceeccccCc
Q psy7276          69 SNLLLNTTCD---LKFFFYFFFSFFFHF   93 (101)
Q Consensus        69 ~nil~~~~~~---~~i~dfgl~~~~~~~   93 (101)
                      +||+++.++.   ++|+|||++......
T Consensus       150 ~NILl~~~g~~~~vKL~DFG~a~~~~~~  177 (676)
T 3qa8_A          150 ENIVLQPGPQRLIHKIIDLGYAKELDQG  177 (676)
T ss_dssp             TTEEEECCSSSCEEEECSCCCCCBTTSC
T ss_pred             HHeEeecCCCceeEEEcccccccccccc
Confidence            9999987765   899999998876544

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.53  E-value=1.5e-15  Score=97.45  Aligned_cols=56  Identities=16%  Similarity=0.176  Sum_probs=50.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceecccc
Q psy7276          36 RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        36 ~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~   91 (101)
                      .+++.....++.|++.|+.|+|+++++|+|+||+||+++.++.+||+|||+++...
T Consensus       207 ~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~  262 (413)
T 3dzo_A          207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG  262 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecC
Confidence            45677788888999999999999999999999999999999999999999987543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.32  E-value=1.3e-12  Score=79.30  Aligned_cols=53  Identities=15%  Similarity=0.141  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          39 NDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        39 ~~~~~~~~~~i~~~l~~~h-~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +..+..++.|++.++.++| ..+++|+|++|.||+++.  .++|+|||+|....+.
T Consensus       169 ~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~  222 (258)
T 1zth_A          169 ELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLRHP  222 (258)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred             hHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence            4466788999999999999 999999999999999988  9999999998866443

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.02  E-value=4.5e-10  Score=71.94  Aligned_cols=69  Identities=10%  Similarity=0.091  Sum_probs=49.7

Q ss_pred             EEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC----------eEEEeeceeccc
Q psy7276          21 VSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----------LKFFFYFFFSFF   90 (101)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~----------~~i~dfgl~~~~   90 (101)
                      +++|++........- ...+.+..++.|++.++.++|+.|++|+|+||.|||++.++.          +.|+||+-+...
T Consensus       187 ~LVME~i~G~~L~~l-~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          187 TIVMSLVDALPMRQV-SSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EEEEECCSCEEGGGC-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             eEEEEecCCccHhhh-cccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            356666543222111 122344567889999999999999999999999999988763          899999965543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.35  E-value=7.9e-07  Score=53.53  Aligned_cols=83  Identities=11%  Similarity=-0.071  Sum_probs=55.4

Q ss_pred             ceeEEEEEeeCCCceEEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHH---------------------------
Q psy7276           6 DQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHS---------------------------   58 (101)
Q Consensus         6 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~---------------------------   58 (101)
                      .+..++......+..+.+|++...........+......++.++..++..+|+                           
T Consensus        71 ~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (263)
T 3tm0_A           71 PVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL  150 (263)
T ss_dssp             CCCCEEEEEEETTEEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred             CCCeEEEEEecCCceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence            34456666666777788888865543322111122233566777778888887                           


Q ss_pred             --------------------------------CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 --------------------------------ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 --------------------------------~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                                                      .+++|.|+++.|++++.++.+.++||+.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                            448999999999999765556799998654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.16  E-value=3.8e-06  Score=50.13  Aligned_cols=29  Identities=17%  Similarity=0.055  Sum_probs=24.5

Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceecc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSF   89 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~   89 (101)
                      ++|+|+++.|++++.++.+.++||+.+..
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            89999999999997665566999998653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.08  E-value=2.9e-05  Score=48.83  Aligned_cols=82  Identities=12%  Similarity=0.137  Sum_probs=57.6

Q ss_pred             eeEEEEEeeCC---CceEEEeecccccccc---ccCCCHHHHHHHHHHHHHHHHHHHH----------------------
Q psy7276           7 QITIEIRHSTK---ESLVSFREYSDSHRTK---YQRLSNDHICYFLYQILRGLKYIHS----------------------   58 (101)
Q Consensus         7 ~~~~~~~~~~~---~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~h~----------------------   58 (101)
                      +..++..+...   +..+.++++.......   ...+++.....+..++...+..+|+                      
T Consensus       100 vP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3dxp_A          100 VAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQI  179 (359)
T ss_dssp             CCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHH
T ss_pred             CCcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHH
Confidence            33444444443   4567788876554332   1235667777788888888888886                      


Q ss_pred             ------------------------------------CCceeccCCCCCeEEeeCCC--eEEEeeceec
Q psy7276          59 ------------------------------------ANVLHRDLKPSNLLLNTTCD--LKFFFYFFFS   88 (101)
Q Consensus        59 ------------------------------------~~i~~~~lk~~nil~~~~~~--~~i~dfgl~~   88 (101)
                                                          ..++|+|+++.|++++.++.  +.++||+.+.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          180 ERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             HHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             HHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence                                                35899999999999987653  6899998765

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.80  E-value=0.0029  Score=39.08  Aligned_cols=31  Identities=26%  Similarity=0.205  Sum_probs=27.1

Q ss_pred             HCCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          58 SANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        58 ~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ..+++|+|+.+.|++++.++.+.++||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            3579999999999999888889999998654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.23  E-value=0.0069  Score=37.14  Aligned_cols=30  Identities=13%  Similarity=0.200  Sum_probs=25.0

Q ss_pred             CceeccCCCCCeEEee--CCCeEEEeeceecc
Q psy7276          60 NVLHRDLKPSNLLLNT--TCDLKFFFYFFFSF   89 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~--~~~~~i~dfgl~~~   89 (101)
                      .++|.|+++.|++++.  ...+.++||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            4799999999999987  45678999987653

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.92  E-value=0.0066  Score=39.01  Aligned_cols=31  Identities=13%  Similarity=0.214  Sum_probs=26.4

Q ss_pred             HHCCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          57 HSANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        57 h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      +...++|.|+++.|++++.++ +.++||+.+.
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~  260 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSF  260 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence            356799999999999998766 9999997655

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.73  E-value=0.11  Score=32.02  Aligned_cols=29  Identities=21%  Similarity=0.269  Sum_probs=23.9

Q ss_pred             CceeccCCCCCeEEee---CCC-eEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNT---TCD-LKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~---~~~-~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++++.   ++. +.|+||+.+.
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence            5799999999999987   455 4799998655

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.81  E-value=0.011  Score=35.42  Aligned_cols=28  Identities=18%  Similarity=0.089  Sum_probs=23.9

Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ++|.|+.+.|++++.++.+-|+||+.+.
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            7899999999999876667799998654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.32  E-value=0.009  Score=36.77  Aligned_cols=30  Identities=23%  Similarity=0.322  Sum_probs=24.4

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++.++.+.++||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            368999999999999876556799997543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=94.04  E-value=0.014  Score=36.51  Aligned_cols=30  Identities=13%  Similarity=0.152  Sum_probs=24.6

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ..++|.|+.+.|++++.+..+.|+||..+.
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            468999999999999854447899998654

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.92  E-value=0.016  Score=35.89  Aligned_cols=30  Identities=20%  Similarity=0.212  Sum_probs=25.4

Q ss_pred             CCceeccCCCCCeEEeeC----CCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTT----CDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~----~~~~i~dfgl~~   88 (101)
                      ..++|+|+.+.|++++.+    +.+.++||+.+.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            468999999999999764    678999998655

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.36  E-value=0.085  Score=32.46  Aligned_cols=28  Identities=21%  Similarity=0.077  Sum_probs=23.7

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ..++|.|+.+.|++++ + .+.++||..+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            4578999999999998 4 89999997544

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=92.75  E-value=0.034  Score=35.02  Aligned_cols=27  Identities=22%  Similarity=0.507  Sum_probs=22.0

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeecee
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFF   87 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~   87 (101)
                      +++|.|+.+.|++++.++ +.++||..+
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a  239 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYS  239 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTC
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCC
Confidence            589999999999987544 899998643

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=92.72  E-value=0.038  Score=34.58  Aligned_cols=30  Identities=13%  Similarity=0.101  Sum_probs=25.8

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ..++|.|+.+.|++++.++.+.++||..+.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            368999999999999887889999997544

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=92.46  E-value=0.049  Score=33.29  Aligned_cols=28  Identities=18%  Similarity=0.102  Sum_probs=23.6

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++ ..++.+.++||..+.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            4799999999999 566778999997654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=91.95  E-value=0.054  Score=35.12  Aligned_cols=17  Identities=35%  Similarity=0.587  Sum_probs=14.7

Q ss_pred             CceeccCCCCCeEEeeC
Q psy7276          60 NVLHRDLKPSNLLLNTT   76 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~   76 (101)
                      .++|.|+.+.|++++.+
T Consensus       250 v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEECSCCCGGGEEEEC-
T ss_pred             EEEeCCCCCCeEEeeCC
Confidence            58999999999999875

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=91.84  E-value=0.068  Score=35.08  Aligned_cols=15  Identities=33%  Similarity=0.401  Sum_probs=14.0

Q ss_pred             CceeccCCCCCeEEe
Q psy7276          60 NVLHRDLKPSNLLLN   74 (101)
Q Consensus        60 ~i~~~~lk~~nil~~   74 (101)
                      .++|.|+.+.|++++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            579999999999998

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=91.43  E-value=0.083  Score=33.55  Aligned_cols=30  Identities=17%  Similarity=0.247  Sum_probs=24.7

Q ss_pred             HCCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          58 SANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        58 ~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ...++|.|+.+.|++++.+ .+.++||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            3578999999999999765 48999997655

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=91.23  E-value=0.09  Score=33.69  Aligned_cols=29  Identities=24%  Similarity=0.321  Sum_probs=24.8

Q ss_pred             CceeccCCCCCeEEeeC----CCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTT----CDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~----~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++++.+    +.+.++||..+.
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            58999999999999876    689999997554

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=90.66  E-value=0.1  Score=33.39  Aligned_cols=29  Identities=24%  Similarity=0.275  Sum_probs=23.2

Q ss_pred             CceeccCCCCCeEEe------eCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLN------TTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~------~~~~~~i~dfgl~~   88 (101)
                      .++|+|+.+.|+++.      .+..+.++||-.|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            368999999999993      45679999986544

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=87.41  E-value=2.2  Score=25.38  Aligned_cols=57  Identities=18%  Similarity=0.071  Sum_probs=40.8

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ...+...-.+++..++..... |...-.+.-+.|+|++++.++.+++.-.|+--.+.|
T Consensus        80 ~~~~~~eKlrll~nl~~L~~~-~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP  136 (219)
T 4ano_A           80 RKTTLLSRIRAAIHLVSKVKH-HSARRLIFIVCPENLMFNRALEPFFLHVGVKESLPP  136 (219)
T ss_dssp             HTSCHHHHHHHHHHHHHHHSS-CCSSSEECCCCGGGEEECTTCCEEESCCEETTTBSS
T ss_pred             HhcCHHHHHHHHHHHHHHHHH-hhhCceeEEEeCceEEEeCCCcEEEEEcCCcccCCC
Confidence            346666777777776654431 234457778999999999999999999998554433

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=87.37  E-value=0.23  Score=32.32  Aligned_cols=28  Identities=29%  Similarity=0.476  Sum_probs=23.9

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++ +.++.+.++||..+.
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCC
Confidence            5799999999999 777889999987544

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=80.51  E-value=5.7  Score=23.55  Aligned_cols=57  Identities=9%  Similarity=-0.040  Sum_probs=41.8

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          35 QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        35 ~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ...+...-.+++.+++....+  ...-.+.-+.|+|++++.++.+++.=.|+--.+.|-
T Consensus        76 k~~~~~eKlr~l~ni~~l~~~--~~~r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~P~  132 (215)
T 4ann_A           76 KSFTKNEKLRYLLNIKNLEEV--NRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPL  132 (215)
T ss_dssp             GGSCHHHHHHHHHHGGGGGGG--GGSSEECCCSGGGEEECTTSCEEESCCEETTTBSCC
T ss_pred             HhcCHHHHHHHHHHHHHHHHH--hcCceEEEEecceEEEcCCCCEEEEEccCccCCCCC
Confidence            446677777777777665533  333467789999999999999999999985555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	101
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-12
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-10
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-10
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-10
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-10
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-08
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-08
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-08
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-07
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	4e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-05
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-04

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 2e-12
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
             +            + L+   I     Q L  L Y+H   ++HRDLK  N+L     D+
Sbjct: 90  FCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI 149

Query: 80  K 80
           K
Sbjct: 150 K 150

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (142), Expect = 2e-12
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                K  +        ++ ++   L Y HS  V+HRD+KP NLLL +  +LK
Sbjct: 94  YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK 146

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.3 bits (138), Expect = 8e-12
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           D      + L    I    +  L+GL Y+HS N++HRD+K  N+LL+    +K
Sbjct: 103 DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 155

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 9e-12
 Identities = 17/63 (26%), Positives = 29/63 (46%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
                    +       F +Q++ G+ Y+H   + HRD+KP NLLL+   +LK   +   
Sbjct: 91  FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 150

Query: 88  SFF 90
           + F
Sbjct: 151 TVF 153

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 1e-11
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLK 80
           D    K  R+    +      +++GL Y+   + ++HRD+KPSN+L+N+  ++K
Sbjct: 92  DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 2e-11
 Identities = 18/71 (25%), Positives = 35/71 (49%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYF 85
            +   +     +  + I   ++Q+LRGL ++HS  V+HRDLKP N+L+ ++  +K   + 
Sbjct: 102 TTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG 161

Query: 86  FFSFFFHFTVH 96
               +      
Sbjct: 162 LARIYSFQMAL 172

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 2e-11
 Identities = 18/68 (26%), Positives = 27/68 (39%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF 89
                Q  +       +  I   ++Y+HS N+ HRD+KP NLL  +           F F
Sbjct: 101 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 160

Query: 90  FFHFTVHD 97
               T H+
Sbjct: 161 AKETTSHN 168

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.2 bits (132), Expect = 5e-11
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
            SH  +  R S  H  ++  QI+   +Y+HS ++++RDLKP NLL++    ++   + F 
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

Query: 88  SFFFH 92
                
Sbjct: 189 KRVKG 193

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 8e-11
 Identities = 46/58 (79%), Positives = 46/58 (79%)

Query: 23  FREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                     K Q LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK
Sbjct: 92  LMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 149

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 1e-10
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT 94
             +    I     + L+ L+++HS  V+HRD+K  N+LL     +K    F F       
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK-LTDFGFCAQITPE 169

Query: 95  VHDVT 99
               +
Sbjct: 170 QSKRS 174

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 53.9 bits (129), Expect = 1e-10
 Identities = 16/56 (28%), Positives = 31/56 (55%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 75
            +S  E  +    ++ ++S D    ++ Q+ +GL ++H  N +H DLKP N++  T
Sbjct: 104 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 159

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 2e-10
 Identities = 17/86 (19%), Positives = 34/86 (39%)

Query: 14  HSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 73
              ++S +  +            L  + +  F YQ+ +G+ ++ S N +HRDL   N+LL
Sbjct: 119 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178

Query: 74  NTTCDLKFFFYFFFSFFFHFTVHDVT 99
                 K   +       + + + V 
Sbjct: 179 THGRITKICDFGLARDIKNDSNYVVK 204

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (127), Expect = 3e-10
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                +     +     Q  +G+ Y+H+ +++HRDLK +N+ L+    +K
Sbjct: 95  HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 52.8 bits (126), Expect = 3e-10
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             + T+   LS       +  +L  +  +H  N++HRDLKP N+LL+   ++K
Sbjct: 98  FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIK 150

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 3e-10
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                 +L+ + +     QI  G+ +I   N +HRDL+ +N+L++ T   K
Sbjct: 99  KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCK 149

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 5e-10
 Identities = 15/73 (20%), Positives = 29/73 (39%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
             +  K          ++  +I+  L+Y+H   ++HRDLKP N+LLN    ++   +   
Sbjct: 96  LKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA 155

Query: 88  SFFFHFTVHDVTK 100
                 +      
Sbjct: 156 KVLSPESKQARAN 168

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 6e-10
 Identities = 13/70 (18%), Positives = 27/70 (38%)

Query: 31  RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFF 90
            +    LS+  + +F   + RG+ Y+     +HRDL   N+L+      K   +      
Sbjct: 118 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ 177

Query: 91  FHFTVHDVTK 100
             +    + +
Sbjct: 178 EVYVKKTMGR 187

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 6e-10
 Identities = 11/69 (15%), Positives = 32/69 (46%)

Query: 6   DQITIEIRHSTKESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRD 65
           + +  +    +++ +    +           L+ + +  F YQ+ +G++++   + +HRD
Sbjct: 130 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 189

Query: 66  LKPSNLLLN 74
           L   N+L+ 
Sbjct: 190 LAARNVLVT 198

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 7e-10
 Identities = 17/72 (23%), Positives = 32/72 (44%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
           +      ++LS+  +    YQ+ RG++Y+ S   +HRDL   N+L+     +K   +   
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182

Query: 88  SFFFHFTVHDVT 99
               H   +  T
Sbjct: 183 RDIHHIDYYKKT 194

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 9e-10
 Identities = 12/61 (19%), Positives = 22/61 (36%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF 89
                  L  D +  F   +   ++Y+   N +HRDL   N+L++     K   +     
Sbjct: 93  RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 152

Query: 90  F 90
            
Sbjct: 153 A 153

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-09
 Identities = 13/46 (28%), Positives = 28/46 (60%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             L+ +H+  + +Q+ +G++++ S   +HRDL   N+LL+    +K
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 174

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 1e-09
 Identities = 21/78 (26%), Positives = 36/78 (46%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
           +    +  +    Q L   ++  ++YQ+ R L YIHS  + HRD+KP NLLL+    +  
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163

Query: 82  FFYFFFSFFFHFTVHDVT 99
              F  +        +V+
Sbjct: 164 LCDFGSAKQLVRGEPNVS 181

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.8 bits (121), Expect = 1e-09
 Identities = 15/61 (24%), Positives = 30/61 (49%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
            +S  E  D    +  ++S   +  ++ Q   GLK++H  +++H D+KP N++  T    
Sbjct: 107 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS 166

Query: 80  K 80
            
Sbjct: 167 S 167

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 2e-09
 Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 4   HQDQITIEIRHSTKESLVSFREYSD-----SHRTKYQRLSNDHICYFLYQILRGLKYIHS 58
           H     ++    T + L    EY++      H ++ +  + +   ++  +I+  L+Y+HS
Sbjct: 64  HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123

Query: 59  ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH 92
            +V++RD+K  NL+L+    +K   +        
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-09
 Identities = 15/76 (19%), Positives = 32/76 (42%)

Query: 25  EYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFY 84
           E     + +   L    +  + YQ+   L Y+ S   +HRD+   N+L+++   +K   +
Sbjct: 93  ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 152

Query: 85  FFFSFFFHFTVHDVTK 100
               +    T +  +K
Sbjct: 153 GLSRYMEDSTYYKASK 168

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 3e-09
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 5/64 (7%)

Query: 22  SFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIH-----SANVLHRDLKPSNLLLNTT 76
                      + Q L  + +   + Q+   LK  H        VLHRDLKP+N+ L+  
Sbjct: 91  DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 150

Query: 77  CDLK 80
            ++K
Sbjct: 151 QNVK 154

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (118), Expect = 4e-09
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                Q +S   + Y   QI   ++Y+   N +HRDL   N L+     +K
Sbjct: 105 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 155

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 5e-09
 Identities = 15/73 (20%), Positives = 33/73 (45%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
           + +  + + + + +I   ++Q+  G+KY+  +N +HRDL   N+LL T    K   +   
Sbjct: 95  NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 154

Query: 88  SFFFHFTVHDVTK 100
                   +   +
Sbjct: 155 KALRADENYYKAQ 167

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.4 bits (117), Expect = 6e-09
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            R    + +   +   L  I  G+KY+   N +HRDL   N+L+N+    K
Sbjct: 118 LRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCK 168

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 7e-09
 Identities = 26/68 (38%), Positives = 40/68 (58%)

Query: 23  FREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFF 82
           F         K+++L  D I + +YQ+L+GL+YIH+A ++HRDLKP NL +N  C+LK  
Sbjct: 104 FMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKIL 163

Query: 83  FYFFFSFF 90
            +      
Sbjct: 164 DFGLARQA 171

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.6 bits (115), Expect = 9e-09
 Identities = 10/65 (15%), Positives = 25/65 (38%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
                    ++       +    + L + H   ++HRD+KP+N++++ T  +K   +   
Sbjct: 99  RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 158

Query: 88  SFFFH 92
                
Sbjct: 159 RAIAD 163

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.6 bits (115), Expect = 1e-08
 Identities = 16/63 (25%), Positives = 35/63 (55%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
             H +++   S   + ++  +I+ GL+++H+  V++RDLKP+N+LL+    ++       
Sbjct: 95  HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 154

Query: 88  SFF 90
             F
Sbjct: 155 CDF 157

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 1e-08
 Identities = 19/82 (23%), Positives = 29/82 (35%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           L       D  R          +  +  Q+  G+ Y+ S   +HRDL   NLLL T   +
Sbjct: 91  LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV 150

Query: 80  KFFFYFFFSFFFHFTVHDVTKK 101
           K   +           H V ++
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQE 172

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 14/58 (24%), Positives = 25/58 (43%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC 77
           +            K + +   ++   L+Q+  G+KY+   N +HRDL   N+LL    
Sbjct: 89  MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH 146

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.9 bits (113), Expect = 2e-08
 Identities = 12/46 (26%), Positives = 18/46 (39%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             LS         Q+  G+ Y+     +HRDL   N L+     +K
Sbjct: 135 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVK 180

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 2e-08
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 16  TKESLVSFREY------SDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 69
           + E LV   E+       +   T    L+   I  +++Q+   L+++HS N+ H D++P 
Sbjct: 72  SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPE 131

Query: 70  NLLLNTTCDLK 80
           N++  T     
Sbjct: 132 NIIYQTRRSST 142

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 2e-08
 Identities = 17/68 (25%), Positives = 30/68 (44%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFS 88
              T+   L  +    F +Q+L  +++ H+  VLHRD+K  N+L++          F   
Sbjct: 99  DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 158

Query: 89  FFFHFTVH 96
                TV+
Sbjct: 159 ALLKDTVY 166

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 3e-08
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                + L    +     QI  G+ Y+   N +HRDL+ +N+L+      K
Sbjct: 103 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 153

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.1 bits (111), Expect = 3e-08
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 72
           D      ++ S   +     Q++  ++YIHS N +HRD+KP N L
Sbjct: 91  DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL 135

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 4e-08
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 4   HQDQITIEIRHSTKESLVSFREYSDS------HRTKYQRLSNDHICYFLYQILRGLKYIH 57
           H + + +     T+  L    E+           +    +    I  +L+Q+L+GL + H
Sbjct: 60  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119

Query: 58  SANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFF 90
           S  VLHRDLKP NLL+NT   +K   +     F
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF 152

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 4e-08
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFF 87
           D  R     + + ++  +  QI +G+ Y+    ++HRDL   N+L+ T   +K    F  
Sbjct: 99  DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK-ITDFGL 157

Query: 88  SFFFH 92
           +    
Sbjct: 158 AKLLG 162

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 5e-08
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                R K    S   +   L  I  G+KY+ + N +HRDL   N+L+N+    K
Sbjct: 96  LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCK 150

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 46.8 bits (110), Expect = 5e-08
 Identities = 19/64 (29%), Positives = 37/64 (57%)

Query: 29  SHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFS 88
             +  YQ L++  I +++Y+IL+ L Y HS  ++HRD+KP N++++          +  +
Sbjct: 118 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177

Query: 89  FFFH 92
            F+H
Sbjct: 178 EFYH 181

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.6 bits (110), Expect = 5e-08
 Identities = 18/53 (33%), Positives = 31/53 (58%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
            S   K QR  N    ++  ++   L+Y+HS ++++RDLKP N+LL+    +K
Sbjct: 92  FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK 144

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 7e-08
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKF 81
            +     L+  HI  ++   L+GL+Y+H   +LHRDLKP+NLLL+    LK 
Sbjct: 90  IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKL 141

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 7e-08
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                   + +   I   +  +L GL YIH   +LHRD+K +N+L+     LK
Sbjct: 105 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 157

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 2e-07
 Identities = 15/56 (26%), Positives = 25/56 (44%)

Query: 25  EYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             SD  RT+    + + +      +  G+ Y+  A V+HRDL   N L+     +K
Sbjct: 86  CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK 141

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 23  FREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFF 82
                 ++  K Q+L++DH+ + +YQILRGLKYIHSA+++HRDLKPSNL +N  C+LK  
Sbjct: 104 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK-I 162

Query: 83  FYFFFSFFFHFTVH 96
             F  +      + 
Sbjct: 163 LDFGLARHTDDEMT 176

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-07
 Identities = 13/53 (24%), Positives = 21/53 (39%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +  R    R     +      +   ++Y+ S   LHRDL   N L+N    +K
Sbjct: 88  NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 140

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 2e-07
 Identities = 24/51 (47%), Positives = 33/51 (64%)

Query: 40  DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFF 90
           + +  FL+Q+L+GL + HS NVLHRDLKP NLL+N   +LK   +     F
Sbjct: 101 EIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF 151

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 3e-07
 Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLN 74
            ++  +++ +    +  +  QIL+GL+++H+    ++HRDLK  N+ + 
Sbjct: 100 KTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT 148

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 3e-07
 Identities = 12/84 (14%), Positives = 30/84 (35%)

Query: 18  ESLVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC 77
           +S +     + ++       S   +     +I  G+ Y+++   +HRDL   N ++    
Sbjct: 111 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF 170

Query: 78  DLKFFFYFFFSFFFHFTVHDVTKK 101
            +K   +      +    +    K
Sbjct: 171 TVKIGDFGMTRDIYETDYYRKGGK 194

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 3e-07
 Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSF 89
           H ++ +R +   +  ++ +I+  L+++H   +++RD+K  N+LL++   +     F  S 
Sbjct: 119 HLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV-VLTDFGLSK 177

Query: 90  FFH 92
            F 
Sbjct: 178 EFV 180

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 4e-07
 Identities = 14/53 (26%), Positives = 28/53 (52%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
             H     +       ++  +I+ GL+++HS  +++RDLK  N+LL+    +K
Sbjct: 91  MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIK 143

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 44.0 bits (103), Expect = 4e-07
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 26  YSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
             D      ++ S   +     Q+L  ++ IH  ++++RD+KP N L+ 
Sbjct: 87  LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIG 135

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 43.3 bits (101), Expect = 7e-07
 Identities = 22/51 (43%), Positives = 27/51 (52%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
                  L +     FL Q+L G+ Y H   VLHRDLKP NLL+N   +LK
Sbjct: 90  LDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELK 140

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-06
 Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 8/54 (14%)

Query: 35  QRLSNDHICYFLYQILRGLKYIHSA--------NVLHRDLKPSNLLLNTTCDLK 80
             ++ + +         GL ++H           + HRDLK  N+L+       
Sbjct: 95  YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 2e-06
 Identities = 24/73 (32%), Positives = 41/73 (56%)

Query: 20  LVSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 79
           LV     ++  +     L ++ + Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C L
Sbjct: 99  LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 158

Query: 80  KFFFYFFFSFFFH 92
           K   +        
Sbjct: 159 KILDFGLARTAGT 171

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.9 bits (90), Expect = 3e-05
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 33  KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 78
           +    +       ++Q+L  +KY+H   ++HRDLKP NLL  +  +
Sbjct: 100 EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 145

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 4e-05
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 80
           +  R +    +   +  F  Q+ +G+K++ S   +HRDL   N +L+    +K
Sbjct: 118 NFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVK 170

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 38.2 bits (88), Expect = 4e-05
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 45  FLYQILRGLKYIHSANVLHRDLKPSNLLL 73
            L  IL  +   +   ++H DL   N+L+
Sbjct: 108 VLDMILEEVAKFYHRGIVHGDLSQYNVLV 136

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (87), Expect = 6e-05
 Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 30  HRTKYQRLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKFFFYFFFS 88
            + +++ +   ++     Q+L GL Y+H    ++H D+KP N+L+      +       +
Sbjct: 115 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA 174

Query: 89  FFFH 92
              +
Sbjct: 175 DLGN 178

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 3e-04
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 28  DSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 74
                + + L+ +    FL QIL G+ Y+HS  + H DLKP N++L 
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.9
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.89
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.89
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.88
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.88
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.88
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.88
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.88
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.87
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.87
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.87
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.87
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.86
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.86
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.86
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.86
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.86
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.86
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.86
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.86
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.85
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.85
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.85
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.85
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.85
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.84
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.84
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.84
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.84
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.83
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.83
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.83
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.83
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.83
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.82
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.82
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.82
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.81
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.8
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.8
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.8
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.79
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.79
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.79
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.79
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.79
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.78
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.77
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.77
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.77
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.74
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.72
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.71
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.58
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.45
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.58
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.69
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.78
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	92.39
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	88.88
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	85.93

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.1e-24  Score=129.96  Aligned_cols=92  Identities=23%  Similarity=0.311  Sum_probs=81.6

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+.+.++++||++....+     ..+.+++..+..++.|++.|+.|+|+++++|||+||+||+++.+
T Consensus        60 l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~  139 (271)
T d1nvra_          60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER  139 (271)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCC
Confidence            3699999999999999999999999754322     23568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+|+....+
T Consensus       140 ~~~KL~DFG~a~~~~~~  156 (271)
T d1nvra_         140 DNLKISDFGLATVFRYN  156 (271)
T ss_dssp             CCEEECCCTTCEECEET
T ss_pred             CCEEEccchhheeeccC
Confidence            99999999999876443

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.2e-24  Score=130.59  Aligned_cols=91  Identities=20%  Similarity=0.240  Sum_probs=82.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      .|||++.++..+.....++++||++....+    ..+.+++..+..++.|++.|+.|+|+++++|||+||+||+++.++.
T Consensus        75 ~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~  154 (293)
T d1yhwa1          75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS  154 (293)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred             CCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCc
Confidence            699999999999999999999999754322    3367999999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      +||+|||+++.+.+.
T Consensus       155 vkl~DFG~a~~~~~~  169 (293)
T d1yhwa1         155 VKLTDFGFCAQITPE  169 (293)
T ss_dssp             EEECCCTTCEECCST
T ss_pred             Eeeccchhheeeccc
Confidence            999999999877554

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=7.5e-24  Score=130.25  Aligned_cols=95  Identities=23%  Similarity=0.209  Sum_probs=83.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+.+.+++++|++.....     ..+++++..+..++.|++.|+.|+|+++++|||+||+|||++.+
T Consensus        72 l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~  151 (309)
T d1u5ra_          72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP  151 (309)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT
T ss_pred             CCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCC
Confidence            3699999999999999999999999765322     33679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCcccc
Q psy7276          77 CDLKFFFYFFFSFFFHFTVH   96 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~~~   96 (101)
                      +.+||+|||++.........
T Consensus       152 ~~~Kl~DFG~a~~~~~~~~~  171 (309)
T d1u5ra_         152 GLVKLGDFGSASIMAPANSF  171 (309)
T ss_dssp             TEEEECCCTTCBSSSSBCCC
T ss_pred             CCEEEeecccccccCCCCcc
Confidence            99999999999876654433

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-23  Score=126.87  Aligned_cols=92  Identities=22%  Similarity=0.305  Sum_probs=82.3

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+.+.++++||++....+     ..+.+++..+..++.|++.|+.|+|+++++|||+||+|++++.+
T Consensus        63 l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~  142 (263)
T d2j4za1          63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA  142 (263)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             cCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCC
Confidence            3699999999999999999999999765332     33679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+|+.....
T Consensus       143 ~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1         143 GELKIADFGWSVHAPSS  159 (263)
T ss_dssp             SCEEECCCCSCSCCCCC
T ss_pred             CCEeecccceeeecCCC
Confidence            99999999999866543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.3e-23  Score=128.00  Aligned_cols=91  Identities=18%  Similarity=0.199  Sum_probs=81.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+.+++.+++++|++.....       ....+++..+..++.|++.|+.|+|+++++|||+||+|||++.
T Consensus        71 ~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~  150 (287)
T d1opja_          71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE  150 (287)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             CCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECC
Confidence            699999999999999999999999764322       2246889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.+||+|||+|+....+
T Consensus       151 ~~~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_         151 NHLVKVADFGLSRLMTGD  168 (287)
T ss_dssp             GGCEEECCCCCTTTCCSS
T ss_pred             CCcEEEccccceeecCCC
Confidence            999999999999876554

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.6e-23  Score=128.23  Aligned_cols=91  Identities=21%  Similarity=0.262  Sum_probs=74.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.+++++|++....+      ..+.+++..+..++.|++.|+.|+|+++++|||+||+|||++.+
T Consensus        85 ~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~  164 (299)
T d1jpaa_          85 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN  164 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCC
Confidence            699999999999999999999999765322      22468999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+++.+...
T Consensus       165 ~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         165 LVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             CCEEECCC---------
T ss_pred             CcEEECCcccceEccCC
Confidence            99999999999876554

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.2e-23  Score=128.72  Aligned_cols=91  Identities=20%  Similarity=0.303  Sum_probs=81.9

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+...++.++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|||+||+||+++.+
T Consensus        62 l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~  141 (337)
T d1o6la_          62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD  141 (337)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCC
Confidence            3699999999999999999999999765433     33678999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      |.+||+|||+|+....
T Consensus       142 g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_         142 GHIKITDFGLCKEGIS  157 (337)
T ss_dssp             SCEEECCCTTCBCSCC
T ss_pred             CCEEEeeccccccccc
Confidence            9999999999986544

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.9e-23  Score=127.40  Aligned_cols=89  Identities=21%  Similarity=0.263  Sum_probs=79.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.+.+.++++||++....+      ..+.+++..+..++.|++.|+.|+|+++++|||+||+||+++.+
T Consensus        67 ~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~  146 (288)
T d2jfla1          67 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD  146 (288)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCC
Confidence            699999999999999999999999754322      22568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceecccc
Q psy7276          77 CDLKFFFYFFFSFFF   91 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~   91 (101)
                      +.+||+|||+|+...
T Consensus       147 ~~~Kl~DFG~a~~~~  161 (288)
T d2jfla1         147 GDIKLADFGVSAKNT  161 (288)
T ss_dssp             SCEEECCCTTCEECH
T ss_pred             CCEEEEechhhhccC
Confidence            999999999987543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.6e-23  Score=125.68  Aligned_cols=91  Identities=21%  Similarity=0.307  Sum_probs=81.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.+.+.++++||++....+     ..+.+++..+..++.|++.|+.|+|+++++|||+||+||+++.++
T Consensus        66 ~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~  145 (288)
T d1uu3a_          66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM  145 (288)
T ss_dssp             CSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             CCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCc
Confidence            699999999999999999999999764322     336799999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++|+|||+|+.+...
T Consensus       146 ~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPE  161 (288)
T ss_dssp             CEEECCCTTCEECC--
T ss_pred             eEEecccccceecccC
Confidence            9999999999876543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.6e-23  Score=127.69  Aligned_cols=90  Identities=19%  Similarity=0.281  Sum_probs=80.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.+.+.+++++|++....+     +.+.+++..+..++.|++.|+.|+|+ ++|+|||+||+|||++.+
T Consensus        62 ~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~  141 (322)
T d1s9ja_          62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  141 (322)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCC
Confidence            699999999999999999999998764322     33679999999999999999999997 599999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.+||+|||+|+.+..
T Consensus       142 ~~vkl~DFGla~~~~~  157 (322)
T d1s9ja_         142 GEIKLCDFGVSGQLID  157 (322)
T ss_dssp             CCEEECCCCCCHHHHH
T ss_pred             CCEEEeeCCCccccCC
Confidence            9999999999986643

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=7.5e-23  Score=124.14  Aligned_cols=91  Identities=21%  Similarity=0.232  Sum_probs=82.4

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.+++.++++||++....+     ..+.+++..+..++.|++.|+.|+|+++++|+|+||+|++++.++
T Consensus        68 ~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~  147 (277)
T d1phka_          68 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM  147 (277)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCC
Confidence            599999999999999999999999765322     346799999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .+||+|||+++....+
T Consensus       148 ~~kl~DFG~a~~~~~~  163 (277)
T d1phka_         148 NIKLTDFGFSCQLDPG  163 (277)
T ss_dssp             CEEECCCTTCEECCTT
T ss_pred             CeEEccchheeEccCC
Confidence            9999999999876654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=1e-22  Score=127.52  Aligned_cols=91  Identities=19%  Similarity=0.218  Sum_probs=81.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++++||++....+     ....+++..+..++.|++.|+.|+|+++++|||+||+|||++.++
T Consensus        65 ~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g  144 (364)
T d1omwa3          65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG  144 (364)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS
T ss_pred             CCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCC
Confidence            699999999999999999999999764322     336789999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .+||+|||+|+.+...
T Consensus       145 ~iKl~DFGla~~~~~~  160 (364)
T d1omwa3         145 HVRISDLGLACDFSKK  160 (364)
T ss_dssp             CEEECCCTTCEECSSS
T ss_pred             cEEEeeeceeeecCCC
Confidence            9999999999876554

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.88  E-value=8.6e-23  Score=127.39  Aligned_cols=92  Identities=18%  Similarity=0.295  Sum_probs=81.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe--
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~--   74 (101)
                      .|||++.++..+...+.++++||++....+      ...++++..+..++.|++.|+.|+|+++++|||+||+|||++  
T Consensus        84 ~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~  163 (352)
T d1koba_          84 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK  163 (352)
T ss_dssp             CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc
Confidence            699999999999999999999999764322      123689999999999999999999999999999999999997  


Q ss_pred             eCCCeEEEeeceeccccCcc
Q psy7276          75 TTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~~   94 (101)
                      .++.+||+|||+|+.+.++.
T Consensus       164 ~~~~vkL~DFGla~~~~~~~  183 (352)
T d1koba_         164 KASSVKIIDFGLATKLNPDE  183 (352)
T ss_dssp             TCCCEEECCCTTCEECCTTS
T ss_pred             CCCeEEEeecccceecCCCC
Confidence            46789999999999876653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.3e-23  Score=125.98  Aligned_cols=92  Identities=17%  Similarity=0.253  Sum_probs=79.4

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccccc----------------------------ccCCCHHHHHHHHHHHHHHH
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTK----------------------------YQRLSNDHICYFLYQILRGL   53 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~~l   53 (101)
                      ..|||++.++..+...+.+++++|++....+.                            ...+++..+..++.|++.|+
T Consensus        98 ~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl  177 (325)
T d1rjba_          98 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM  177 (325)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHH
T ss_pred             cCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence            47999999999999999999999997542210                            12478889999999999999


Q ss_pred             HHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          54 KYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        54 ~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      .|+|+++|+|||+||+||+++.++.+||+|||+|+.....
T Consensus       178 ~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~  217 (325)
T d1rjba_         178 EFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD  217 (325)
T ss_dssp             HHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGC
T ss_pred             HHHHhCCeeeccCchhccccccCCeEEEeeccccccccCC
Confidence            9999999999999999999999999999999999876554

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.4e-22  Score=124.88  Aligned_cols=91  Identities=23%  Similarity=0.355  Sum_probs=81.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+.+.+.++.+||++.....     ....+++..+..++.|++.|+.|+|+++++|||+||+||+++.+
T Consensus        61 l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~  140 (316)
T d1fota_          61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN  140 (316)
T ss_dssp             CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT
T ss_pred             ccCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCC
Confidence            4799999999999999999999999765322     33567888999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.+||+|||+|+....
T Consensus       141 g~vkL~DFG~a~~~~~  156 (316)
T d1fota_         141 GHIKITDFGFAKYVPD  156 (316)
T ss_dssp             SCEEECCCSSCEECSS
T ss_pred             CCEEEecCccceEecc
Confidence            9999999999987654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.3e-22  Score=122.13  Aligned_cols=91  Identities=15%  Similarity=0.200  Sum_probs=74.9

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++|++....+      ....+++.....++.|++.|+.|+|+++++|||+||+|++++.+
T Consensus        58 ~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~  137 (263)
T d1sm2a_          58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN  137 (263)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGG
T ss_pred             CCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCC
Confidence            699999999999999999999999754322      22457889999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+++.....
T Consensus       138 ~~~Kl~DFGla~~~~~~  154 (263)
T d1sm2a_         138 QVIKVSDFGMTRFVLDD  154 (263)
T ss_dssp             GCEEECSCC--------
T ss_pred             CCeEecccchheeccCC
Confidence            99999999999876544

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.9e-22  Score=122.57  Aligned_cols=91  Identities=24%  Similarity=0.265  Sum_probs=76.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.+++++.....      ....+++..+..++.+++.|+.|+|+++++|||+||+|||++.+
T Consensus        67 ~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~  146 (283)
T d1mqba_          67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN  146 (283)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             CCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCC
Confidence            699999999999999999999998654322      22568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+++.+..+
T Consensus       147 ~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_         147 LVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             CCEEECCCCC-------
T ss_pred             CeEEEcccchhhcccCC
Confidence            99999999999876554

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=3.1e-22  Score=124.74  Aligned_cols=91  Identities=23%  Similarity=0.331  Sum_probs=81.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.....++.+++++.....     ..+.+++..+..++.|++.|+.|+|+++|+|||+||+|||++.++
T Consensus        99 ~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g  178 (350)
T d1rdqe_          99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG  178 (350)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCC
Confidence            699999999999999999999998654322     336799999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .+||+|||+|+.+...
T Consensus       179 ~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         179 YIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             CEEECCCTTCEECSSC
T ss_pred             CEEeeeceeeeecccc
Confidence            9999999999876543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.4e-22  Score=122.75  Aligned_cols=91  Identities=27%  Similarity=0.373  Sum_probs=81.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.+++++|++.....     ....+++..+..++.|++.|+.|+|+++++|||+||+||+++.++
T Consensus        58 ~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~  137 (299)
T d1ua2a_          58 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG  137 (299)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCC
Confidence            699999999999999999999999754322     235688999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .+||+|||+++.....
T Consensus       138 ~~KL~DFG~a~~~~~~  153 (299)
T d1ua2a_         138 VLKLADFGLAKSFGSP  153 (299)
T ss_dssp             CEEECCCGGGSTTTSC
T ss_pred             ccccccCccccccCCC
Confidence            9999999999866543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.8e-22  Score=121.55  Aligned_cols=89  Identities=17%  Similarity=0.238  Sum_probs=74.8

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+ ..+.+++++|++....+      ....+++..+..++.|++.|+.|+|+++++|||+||+|||++.+
T Consensus        62 ~HpnIv~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~  140 (276)
T d1uwha_          62 RHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED  140 (276)
T ss_dssp             CCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             CCCCEeeeeEEE-eccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCC
Confidence            699999998765 45678899998764322      22568999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccC
Q psy7276          77 CDLKFFFYFFFSFFFH   92 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~   92 (101)
                      +.+||+|||+|+....
T Consensus       141 ~~~Kl~DFGla~~~~~  156 (276)
T d1uwha_         141 LTVKIGDFGLATVKSR  156 (276)
T ss_dssp             SSEEECCCCCSCC---
T ss_pred             CCEEEccccceeeccc
Confidence            9999999999986544

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=4.2e-22  Score=122.32  Aligned_cols=91  Identities=18%  Similarity=0.244  Sum_probs=73.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe---
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~---   74 (101)
                      .|||++.++..+.+.+.++++||++....+     ..+.+++..+..++.|++.|+.|+|+++++|||+||+|+++.   
T Consensus        65 ~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~  144 (307)
T d1a06a_          65 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD  144 (307)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccC
Confidence            699999999999999999999999764322     336799999999999999999999999999999999999995   


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.+||+|||+|+....+
T Consensus       145 ~~~~vkl~DFG~a~~~~~~  163 (307)
T d1a06a_         145 EDSKIMISDFGLSKMEDPG  163 (307)
T ss_dssp             TTCCEEECCC---------
T ss_pred             CCceEEEeccceeEEccCC
Confidence            4678999999999876544

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.2e-22  Score=121.58  Aligned_cols=92  Identities=22%  Similarity=0.264  Sum_probs=82.0

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      ..|||++.++..+..++.+++++|++....+     ..+.+++..+..++.|++.|+.|+|+++++|||+||+||+++.+
T Consensus        60 ~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~  139 (320)
T d1xjda_          60 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD  139 (320)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCC
Confidence            3799999999999999999999999765322     33679999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.++++|||+++.....
T Consensus       140 ~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_         140 GHIKIADFGMCKENMLG  156 (320)
T ss_dssp             SCEEECCCTTCBCCCCT
T ss_pred             Cceeccccchhhhcccc
Confidence            99999999999865543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.3e-22  Score=120.33  Aligned_cols=90  Identities=20%  Similarity=0.183  Sum_probs=78.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.. +..++++|++....+     ....+++..+..++.|++.|+.|+|+++++|||+||+||+++.++
T Consensus        66 ~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~  144 (277)
T d1xbba_          66 DNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH  144 (277)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             CCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccC
Confidence            69999999998865 467899999765322     335689999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++|||+++.+...
T Consensus       145 ~~kl~DFGla~~~~~~  160 (277)
T d1xbba_         145 YAKISDFGLSKALRAD  160 (277)
T ss_dssp             EEEECCCTTCEECCTT
T ss_pred             cccccchhhhhhcccc
Confidence            9999999999876544

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.8e-22  Score=120.05  Aligned_cols=90  Identities=20%  Similarity=0.182  Sum_probs=78.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.. +.++++||++....+      ....+++..+..++.|++.|+.|+|+++++|||+||+|++++.+
T Consensus        67 ~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~  145 (285)
T d1u59a_          67 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR  145 (285)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET
T ss_pred             CCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccC
Confidence            69999999998765 568899999764322      22468999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+||+|||+++.+...
T Consensus       146 ~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_         146 HYAKISDFGLSKALGAD  162 (285)
T ss_dssp             TEEEECCCTTCEECTTC
T ss_pred             Cceeeccchhhhccccc
Confidence            99999999999876554

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.3e-22  Score=121.23  Aligned_cols=91  Identities=30%  Similarity=0.362  Sum_probs=80.9

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+..++.+++++|++.....      ....+++..+..++.|++.|+.|+|+++|+|||+||+||+++.
T Consensus        58 l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~  137 (298)
T d1gz8a_          58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT  137 (298)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecc
Confidence            3699999999999999999999998754311      2356899999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccC
Q psy7276          76 TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~   92 (101)
                      ++.++++|||+|+....
T Consensus       138 ~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_         138 EGAIKLADFGLARAFGV  154 (298)
T ss_dssp             TSCEEECSTTHHHHHCC
T ss_pred             cCcceeccCCcceeccC
Confidence            99999999999886643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.86  E-value=5.2e-22  Score=123.74  Aligned_cols=92  Identities=21%  Similarity=0.350  Sum_probs=80.1

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      .|||++.++..+.+.+.++++||++....+      ..+.+++..+..++.|++.|+.|+|+++++|||+||+||++.. 
T Consensus        81 ~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~  160 (350)
T d1koaa2          81 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK  160 (350)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC
Confidence            699999999999999999999999754321      2356899999999999999999999999999999999999964 


Q ss_pred             -CCCeEEEeeceeccccCcc
Q psy7276          76 -TCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        76 -~~~~~i~dfgl~~~~~~~~   94 (101)
                       ++.+||+|||+++.+....
T Consensus       161 ~~~~vkL~DFG~a~~~~~~~  180 (350)
T d1koaa2         161 RSNELKLIDFGLTAHLDPKQ  180 (350)
T ss_dssp             TSCCEEECCCTTCEECCTTS
T ss_pred             CCCeEEEeecchheeccccc
Confidence             5789999999998766543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9e-22  Score=119.00  Aligned_cols=90  Identities=21%  Similarity=0.289  Sum_probs=77.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccccc-------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRTK-------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      .|||++.++..+. .+.+++++|++....+.       ...+++..+..++.|++.|+.|+|+++++|||+||+||+++.
T Consensus        66 ~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~  144 (272)
T d1qpca_          66 QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD  144 (272)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeec
Confidence            6999999998764 45678999987653321       135899999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.+||+|||+|+.....
T Consensus       145 ~~~~Kl~DFGla~~~~~~  162 (272)
T d1qpca_         145 TLSCKIADFGLARLIEDN  162 (272)
T ss_dssp             TSCEEECCCTTCEECSSS
T ss_pred             ccceeeccccceEEccCC
Confidence            999999999999877554

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.1e-22  Score=120.96  Aligned_cols=92  Identities=25%  Similarity=0.286  Sum_probs=70.9

Q ss_pred             CcccceeEEEEEeeC--CCceEEEeeccccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCC-----ceecc
Q psy7276           2 GFHQDQITIEIRHST--KESLVSFREYSDSHRT---------KYQRLSNDHICYFLYQILRGLKYIHSAN-----VLHRD   65 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~h~~~-----i~~~~   65 (101)
                      ..|||++.++..+..  .+.++++||++....+         ....+++..+..++.|++.|+.|+|+++     |+|||
T Consensus        60 l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrD  139 (269)
T d2java1          60 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD  139 (269)
T ss_dssp             CCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred             CCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCc
Confidence            369999999998854  5678999999754322         2246899999999999999999999876     99999


Q ss_pred             CCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          66 LKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        66 lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +||+||+++.++.+||+|||+++.+...
T Consensus       140 iKp~NIll~~~~~vkl~DFG~a~~~~~~  167 (269)
T d2java1         140 LKPANVFLDGKQNVKLGDFGLARILNHD  167 (269)
T ss_dssp             CCGGGEEECTTSCEEECCHHHHHHC---
T ss_pred             CchhhcCcCCCCcEEEeeccceeecccC
Confidence            9999999999999999999999877654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-21  Score=120.64  Aligned_cols=93  Identities=19%  Similarity=0.288  Sum_probs=80.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KY-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+.+.+.++++||++....+     .. ..+++..+..++.|++.|+.|+|+.+++|||+||+||+++.
T Consensus        58 l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~  137 (321)
T d1tkia_          58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT  137 (321)
T ss_dssp             SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC
Confidence            3699999999999999999999999764322     12 36899999999999999999999999999999999999985


Q ss_pred             C--CCeEEEeeceeccccCcc
Q psy7276          76 T--CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        76 ~--~~~~i~dfgl~~~~~~~~   94 (101)
                      +  ..++++|||+++......
T Consensus       138 ~~~~~ikl~DFG~~~~~~~~~  158 (321)
T d1tkia_         138 RRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             SSCCCEEECCCTTCEECCTTC
T ss_pred             CCceEEEEcccchhhccccCC
Confidence            4  479999999988766543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.7e-21  Score=116.16  Aligned_cols=92  Identities=16%  Similarity=0.224  Sum_probs=81.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+.+.+.++.++|++.....      ....+++..+..++.|++.|+.|+|+.+++|+|++|+|++++.
T Consensus        56 l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~  135 (258)
T d1k2pa_          56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND  135 (258)
T ss_dssp             CCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT
T ss_pred             cCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcC
Confidence            4699999999999999999999998653221      3356889999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.+||+|||+++.+...
T Consensus       136 ~~~~kl~DfG~a~~~~~~  153 (258)
T d1k2pa_         136 QGVVKVSDFGLSRYVLDD  153 (258)
T ss_dssp             TCCEEECCCSSCCBCSSS
T ss_pred             CCcEEECcchhheeccCC
Confidence            999999999999876554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.6e-21  Score=117.88  Aligned_cols=91  Identities=15%  Similarity=0.174  Sum_probs=70.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~   75 (101)
                      ..|||++.++..+. .+.++.+++++.....      ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.
T Consensus        65 l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~  143 (273)
T d1mp8a_          65 FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS  143 (273)
T ss_dssp             CCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE
T ss_pred             CCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecC
Confidence            36999999999886 4678899998654322      2356899999999999999999999999999999999999999


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      ++.+||+|||+++.....
T Consensus       144 ~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_         144 NDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             TTEEEECC----------
T ss_pred             CCcEEEccchhheeccCC
Confidence            999999999999876544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.7e-21  Score=117.78  Aligned_cols=91  Identities=21%  Similarity=0.290  Sum_probs=76.3

Q ss_pred             CcccceeEEEEEeeC----CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCC
Q psy7276           2 GFHQDQITIEIRHST----KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSN   70 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~--i~~~~lk~~n   70 (101)
                      ..|||++.++..+..    ...++++||++....+     +...+++..+..++.|++.|+.|+|+++  |+|||+||+|
T Consensus        65 l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~N  144 (270)
T d1t4ha_          65 LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN  144 (270)
T ss_dssp             CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGG
T ss_pred             CCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhh
Confidence            369999999988764    4557899998655322     3357899999999999999999999998  9999999999


Q ss_pred             eEEe-eCCCeEEEeeceeccccC
Q psy7276          71 LLLN-TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        71 il~~-~~~~~~i~dfgl~~~~~~   92 (101)
                      ||++ .++.+||+|||+++....
T Consensus       145 ILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_         145 IFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             EEESSTTSCEEECCTTGGGGCCT
T ss_pred             ceeeCCCCCEEEeecCcceeccC
Confidence            9996 478999999999986544

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.6e-21  Score=117.30  Aligned_cols=91  Identities=25%  Similarity=0.320  Sum_probs=80.5

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+.+.+.+++++|++....+     ..+.+++..+..++.|++.|+.|+|+.+++|||+||+|++++.++
T Consensus        71 ~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~  150 (293)
T d1jksa_          71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN  150 (293)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCC
Confidence            699999999999999999999999764322     336799999999999999999999999999999999999998766


Q ss_pred             ----CeEEEeeceeccccCc
Q psy7276          78 ----DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ----~~~i~dfgl~~~~~~~   93 (101)
                          .+|++|||++......
T Consensus       151 ~~~~~vkl~DfG~a~~~~~~  170 (293)
T d1jksa_         151 VPKPRIKIIDFGLAHKIDFG  170 (293)
T ss_dssp             SSSCCEEECCCTTCEECTTS
T ss_pred             CcccceEecchhhhhhcCCC
Confidence                4999999999876544

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.1e-21  Score=116.10  Aligned_cols=91  Identities=22%  Similarity=0.282  Sum_probs=78.7

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccc-c-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSH-R-----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+...+.++.++++.... .     .....+++..+..++.|++.|+.|+|+++++|||+||+||+++.+
T Consensus        67 ~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~  146 (273)
T d1xwsa_          67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN  146 (273)
T ss_dssp             SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT
T ss_pred             CCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecC
Confidence            4899999999999999999999986431 1     133679999999999999999999999999999999999999865


Q ss_pred             -CCeEEEeeceeccccCc
Q psy7276          77 -CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 -~~~~i~dfgl~~~~~~~   93 (101)
                       +.++|+|||+|+.....
T Consensus       147 ~~~vkl~DFG~a~~~~~~  164 (273)
T d1xwsa_         147 RGELKLIDFGSGALLKDT  164 (273)
T ss_dssp             TTEEEECCCTTCEECCSS
T ss_pred             CCeEEECccccceecccc
Confidence             78999999998865443

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.9e-21  Score=117.50  Aligned_cols=91  Identities=20%  Similarity=0.216  Sum_probs=75.1

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      ..||||+.++..+.. +.++.+++++.....       ....+++..+..++.+++.|+.|+|.++++|+|+||+||+++
T Consensus        69 l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~  147 (285)
T d1fmka3          69 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG  147 (285)
T ss_dssp             CCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             cccCCEeEEEEEEec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC
Confidence            369999999998754 567899998765322       224689999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.+||+|||+++.....
T Consensus       148 ~~~~~kl~DfGla~~~~~~  166 (285)
T d1fmka3         148 ENLVCKVADFGLARLIEDN  166 (285)
T ss_dssp             GGGCEEECCCCTTC-----
T ss_pred             CCCcEEEcccchhhhccCC
Confidence            9999999999999866544

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.84  E-value=8.2e-21  Score=117.09  Aligned_cols=92  Identities=24%  Similarity=0.394  Sum_probs=77.8

Q ss_pred             CcccceeEEEEEeeC--CCceEEEeeccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           2 GFHQDQITIEIRHST--KESLVSFREYSDSHRTKY--QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      ..|||++.++..+..  ...++.+++++....+..  +.+++..+..++.|++.|+.|+|+++|+|||+||+|||++.++
T Consensus        87 ~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~  166 (328)
T d3bqca1          87 RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH  166 (328)
T ss_dssp             TTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             cCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC
Confidence            369999999998874  456888999876543322  5789999999999999999999999999999999999998765


Q ss_pred             -CeEEEeeceeccccCc
Q psy7276          78 -DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 -~~~i~dfgl~~~~~~~   93 (101)
                       .++++|||+|....+.
T Consensus       167 ~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         167 RKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             TEEEECCGGGCEECCTT
T ss_pred             CeeeecccccceeccCC
Confidence             5999999999876554

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.7e-21  Score=117.94  Aligned_cols=91  Identities=14%  Similarity=0.138  Sum_probs=75.3

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc------ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR------TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.++.. +.++++.....      .....+++..+..++.|++.|+.|+|+++++|||+||+||+++.+
T Consensus        69 ~HpnIv~l~g~~~~~~~-~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~  147 (317)
T d1xkka_          69 DNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP  147 (317)
T ss_dssp             CCTTBCCEEEEEESSSE-EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred             CCCCEeeEEEEEecCCe-eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCC
Confidence            69999999999987654 45555533221      123568899999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCcc
Q psy7276          77 CDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~~   94 (101)
                      +.+||+|||+++......
T Consensus       148 ~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_         148 QHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             TEEEECCCSHHHHTTTTC
T ss_pred             CCeEeeccccceeccccc
Confidence            999999999998765543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.83  E-value=8.1e-21  Score=115.24  Aligned_cols=90  Identities=33%  Similarity=0.356  Sum_probs=80.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR-----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.++..+...+.++.++++.....     ...+.+++..+..++.|++.|++|+|+.+|+|||+||+||+++.++
T Consensus        58 ~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~  137 (286)
T d1ob3a_          58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG  137 (286)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCC
Confidence            59999999999999999999998865432     2346789999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccC
Q psy7276          78 DLKFFFYFFFSFFFH   92 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~   92 (101)
                      .+|++|||++.....
T Consensus       138 ~~kl~DfG~a~~~~~  152 (286)
T d1ob3a_         138 ELKIADFGLARAFGI  152 (286)
T ss_dssp             CEEECCTTHHHHHCC
T ss_pred             CEEecccccceeccc
Confidence            999999999876543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-20  Score=115.23  Aligned_cols=93  Identities=24%  Similarity=0.376  Sum_probs=81.2

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTK---------------------YQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      ..|||++.++..+...+.++.++|++......                     ...+++..+..++.|++.|+.|+|+.+
T Consensus        76 ~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~  155 (299)
T d1fgka_          76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  155 (299)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            37999999999999999999999986543221                     134789999999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      ++|||+||+|+|++.++.+||+|||+++......
T Consensus       156 ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~  189 (299)
T d1fgka_         156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHID  189 (299)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCC
T ss_pred             EEeeeecccceeecCCCCeEeccchhhccccccc
Confidence            9999999999999999999999999998765543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=6.9e-21  Score=116.22  Aligned_cols=92  Identities=18%  Similarity=0.330  Sum_probs=70.2

Q ss_pred             CcccceeEEEEEeeC-CCceEEEeecccccccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHHC
Q psy7276           2 GFHQDQITIEIRHST-KESLVSFREYSDSHRTK---------------------YQRLSNDHICYFLYQILRGLKYIHSA   59 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~l~~~h~~   59 (101)
                      ..|+|++.+...+.. +..++.++|++....+.                     ...+++..+..++.|++.|+.|+|++
T Consensus        74 ~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~  153 (299)
T d1ywna1          74 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR  153 (299)
T ss_dssp             CCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            358899999887765 45688899986532210                     12478899999999999999999999


Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +++|||+||+|||++.++.+||+|||+|+.....
T Consensus       154 ~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  187 (299)
T d1ywna1         154 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD  187 (299)
T ss_dssp             TCCCSCCCGGGEEECGGGCEEECC------CCSC
T ss_pred             CCcCCcCCccceeECCCCcEEEccCcchhhcccc
Confidence            9999999999999999999999999999866544

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.3e-21  Score=116.23  Aligned_cols=91  Identities=21%  Similarity=0.248  Sum_probs=79.8

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc---------------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT---------------------KYQRLSNDHICYFLYQILRGLKYIHSAN   60 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~h~~~   60 (101)
                      ..||||+.++..+...+.++++++++....+                     ....+++.....++.|++.|+.|+|+++
T Consensus        68 ~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~  147 (309)
T d1fvra_          68 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  147 (309)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC
Confidence            4699999999999999999999998653221                     1246889999999999999999999999


Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceeccccC
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ++|+|+||+|||++.++.+||+|||+++....
T Consensus       148 iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~  179 (309)
T d1fvra_         148 FIHRDLAARNILVGENYVAKIADFGLSRGQEV  179 (309)
T ss_dssp             EECSCCSGGGEEECGGGCEEECCTTCEESSCE
T ss_pred             ccccccccceEEEcCCCceEEccccccccccc
Confidence            99999999999999999999999999875443

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.1e-21  Score=117.98  Aligned_cols=92  Identities=23%  Similarity=0.262  Sum_probs=76.7

Q ss_pred             CcccceeEEEEEeeC----CCceEEEeeccccccc-----c--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCC
Q psy7276           2 GFHQDQITIEIRHST----KESLVSFREYSDSHRT-----K--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN   70 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~----~~~l~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~n   70 (101)
                      ..|||++.++..|.+    ...+++++|++....+     .  ...+++..+..++.|++.|+.|+|+++++|||+||+|
T Consensus        62 ~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~N  141 (335)
T d2ozaa1          62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  141 (335)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             cCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccc
Confidence            469999999988864    4668999999754221     1  2358999999999999999999999999999999999


Q ss_pred             eEEee---CCCeEEEeeceeccccCc
Q psy7276          71 LLLNT---TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        71 il~~~---~~~~~i~dfgl~~~~~~~   93 (101)
                      |+++.   .+.+||+|||+++.....
T Consensus       142 Ill~~~~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1         142 LLYTSKRPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             EEESCSSTTCCEEECCCTTCEECCCC
T ss_pred             cccccccccccccccccceeeeccCC
Confidence            99986   356999999999876554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.5e-20  Score=113.70  Aligned_cols=90  Identities=20%  Similarity=0.185  Sum_probs=77.2

Q ss_pred             cccceeEEEEEeeCCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT   76 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~   76 (101)
                      .|||++.++..+.++ .++.+++++.....      ..+.+++..+..++.|++.|+.|+|+++++|+|+||+||+++.+
T Consensus        69 ~H~nIv~~~g~~~~~-~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~  147 (273)
T d1u46a_          69 DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR  147 (273)
T ss_dssp             CCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET
T ss_pred             CCCCEEEEEEEEeec-chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc
Confidence            699999999999764 66788888654322      23569999999999999999999999999999999999999999


Q ss_pred             CCeEEEeeceeccccCc
Q psy7276          77 CDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        77 ~~~~i~dfgl~~~~~~~   93 (101)
                      +.+|++|||+++.....
T Consensus       148 ~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_         148 DLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             TEEEECCCTTCEECCC-
T ss_pred             cceeeccchhhhhcccC
Confidence            99999999999876554

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.1e-20  Score=116.27  Aligned_cols=92  Identities=26%  Similarity=0.317  Sum_probs=75.6

Q ss_pred             cccceeEEEEEeeCC------CceEEEeecccccc--------ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q psy7276           3 FHQDQITIEIRHSTK------ESLVSFREYSDSHR--------TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKP   68 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~------~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~   68 (101)
                      .|||++.++..+...      ..+++++|++....        .....+++..+..++.|++.|+.|+|+++|+|||+||
T Consensus        71 ~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp  150 (350)
T d1q5ka_          71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP  150 (350)
T ss_dssp             CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred             CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCc
Confidence            699999998887533      23678888865421        1234689999999999999999999999999999999


Q ss_pred             CCeEEeeCC-CeEEEeeceeccccCcc
Q psy7276          69 SNLLLNTTC-DLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        69 ~nil~~~~~-~~~i~dfgl~~~~~~~~   94 (101)
                      +|||++.++ .+||+|||++.......
T Consensus       151 ~NILl~~~~~~~kl~DFG~a~~~~~~~  177 (350)
T d1q5ka_         151 QNLLLDPDTAVLKLCDFGSAKQLVRGE  177 (350)
T ss_dssp             GGEEECTTTCCEEECCCTTCEECCTTS
T ss_pred             ceEEEecCCCceeEecccchhhccCCc
Confidence            999999775 89999999988765543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.7e-20  Score=114.23  Aligned_cols=93  Identities=20%  Similarity=0.247  Sum_probs=80.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----------------------cccCCCHHHHHHHHHHHHHHHHHHHH
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----------------------KYQRLSNDHICYFLYQILRGLKYIHS   58 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~i~~~l~~~h~   58 (101)
                      ..|||++.++..+.+...+++++|++.....                       ....+++..+..++.|++.|+.|+|+
T Consensus        84 ~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~  163 (311)
T d1t46a_          84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS  163 (311)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4699999999999999999999998754321                       11247889999999999999999999


Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceeccccCcc
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHFT   94 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~~   94 (101)
                      ++++|+|+||+||+++.++.++++|||+++......
T Consensus       164 ~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~  199 (311)
T d1t46a_         164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS  199 (311)
T ss_dssp             TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT
T ss_pred             CCeeecccccccccccccCcccccccchheeccCCC
Confidence            999999999999999999999999999998766543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=1.8e-20  Score=114.56  Aligned_cols=92  Identities=15%  Similarity=0.134  Sum_probs=78.7

Q ss_pred             CcccceeEEEEEeeCCCceEEEeecccccccc-----------------------------ccCCCHHHHHHHHHHHHHH
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTK-----------------------------YQRLSNDHICYFLYQILRG   52 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~   52 (101)
                      ..|||++.++..+...+.++.++++.....+.                             ...+++..+..++.|++.|
T Consensus        73 l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~g  152 (301)
T d1lufa_          73 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG  152 (301)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHH
T ss_pred             cCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHH
Confidence            36999999999999999999999985432111                             1237788899999999999


Q ss_pred             HHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          53 LKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        53 l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +.|+|+.+++|+|+||+|||++.++.+||+|||+|+.+.+.
T Consensus       153 l~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~  193 (301)
T d1lufa_         153 MAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA  193 (301)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG
T ss_pred             hhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCC
Confidence            99999999999999999999999999999999999866544

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=9.1e-20  Score=111.78  Aligned_cols=92  Identities=14%  Similarity=0.106  Sum_probs=78.9

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccccc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRTKY---------------QRLSNDHICYFLYQILRGLKYIHSANVLHRDL   66 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~l   66 (101)
                      ..|||++.++..+...+.++.+++++.......               ..+++..+..++.+++.|+.|+|.++++|+|+
T Consensus        80 l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDl  159 (308)
T d1p4oa_          80 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL  159 (308)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCC
T ss_pred             cCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceE
Confidence            369999999999999999999999865422211               23578888999999999999999999999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ||+|+|++.++.+||+|||+++.+...
T Consensus       160 k~~NiLld~~~~~Kl~DFGla~~~~~~  186 (308)
T d1p4oa_         160 AARNCMVAEDFTVKIGDFGMTRDIYET  186 (308)
T ss_dssp             SGGGEEECTTCCEEECCTTCCCGGGGG
T ss_pred             cCCceeecCCceEEEeecccceeccCC
Confidence            999999999999999999999876544

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.80  E-value=1.1e-19  Score=109.79  Aligned_cols=90  Identities=16%  Similarity=0.213  Sum_probs=76.7

Q ss_pred             CcccceeEEEEEeeCCC----ceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeE
Q psy7276           2 GFHQDQITIEIRHSTKE----SLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL   72 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~----~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil   72 (101)
                      ..|||++.++..+....    .++++||++....+     ..+.+++..+..++.|++.|+.|+|+++++|||+||+||+
T Consensus        64 ~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIl  143 (277)
T d1o6ya_          64 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM  143 (277)
T ss_dssp             CCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             cCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccc
Confidence            36999999998887543    37899999765332     3357999999999999999999999999999999999999


Q ss_pred             EeeCCCeEEEeeceecccc
Q psy7276          73 LNTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        73 ~~~~~~~~i~dfgl~~~~~   91 (101)
                      ++.++..+++|||.+....
T Consensus       144 l~~~~~~~l~d~~~~~~~~  162 (277)
T d1o6ya_         144 ISATNAVKVMDFGIARAIA  162 (277)
T ss_dssp             EETTSCEEECCCTTCEECC
T ss_pred             cCccccceeehhhhhhhhc
Confidence            9999999999999876543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.9e-19  Score=109.15  Aligned_cols=91  Identities=32%  Similarity=0.449  Sum_probs=80.0

Q ss_pred             cccceeEEEEEeeCCCceEEEeecccccc-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCC
Q psy7276           3 FHQDQITIEIRHSTKESLVSFREYSDSHR-----TKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC   77 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~   77 (101)
                      .|||++.+...+.....++.++++.....     ...+.+++..+..++.|++.|+.|+|+++|+|+|+||+||+++.++
T Consensus        59 ~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~  138 (292)
T d1unla_          59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCC
Confidence            69999999999999999999988754432     2335788999999999999999999999999999999999999999


Q ss_pred             CeEEEeeceeccccCc
Q psy7276          78 DLKFFFYFFFSFFFHF   93 (101)
Q Consensus        78 ~~~i~dfgl~~~~~~~   93 (101)
                      .++++|||.++.....
T Consensus       139 ~~kl~DFG~a~~~~~~  154 (292)
T d1unla_         139 ELKLANFGLARAFGIP  154 (292)
T ss_dssp             CEEECCCTTCEECCSC
T ss_pred             ceeeeecchhhcccCC
Confidence            9999999999876543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1e-19  Score=112.85  Aligned_cols=91  Identities=31%  Similarity=0.527  Sum_probs=78.7

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeeccccc---cccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDSH---RTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+...+      .++++++++...   ..+.+.+++..+..++.|++.|+.|+|+++|+|||+||+||++
T Consensus        75 ~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~  154 (346)
T d1cm8a_          75 RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV  154 (346)
T ss_dssp             CBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCCCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc
Confidence            6999999999987655      468889986432   2234679999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceeccccCc
Q psy7276          74 NTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~~~   93 (101)
                      +.++.++++|||+|+.....
T Consensus       155 ~~~~~~kl~Dfg~a~~~~~~  174 (346)
T d1cm8a_         155 NEDCELKILDFGLARQADSE  174 (346)
T ss_dssp             CTTCCEEECCCTTCEECCSS
T ss_pred             ccccccccccccceeccCCc
Confidence            99999999999999876553

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.5e-19  Score=110.47  Aligned_cols=90  Identities=17%  Similarity=0.262  Sum_probs=79.2

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCC
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD   78 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~   78 (101)
                      |||++.++..+.....++.++++.....+     ..+.+.+..+..++.|++.|+.|+|+++++|||+||+|++++.++.
T Consensus        88 ~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~  167 (322)
T d1vzoa_          88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH  167 (322)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred             CCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCC
Confidence            48999999999999999999998654322     3356889999999999999999999999999999999999999999


Q ss_pred             eEEEeeceeccccCc
Q psy7276          79 LKFFFYFFFSFFFHF   93 (101)
Q Consensus        79 ~~i~dfgl~~~~~~~   93 (101)
                      ++|+|||+++.+...
T Consensus       168 vkL~DFG~a~~~~~~  182 (322)
T d1vzoa_         168 VVLTDFGLSKEFVAD  182 (322)
T ss_dssp             EEESCSSEEEECCGG
T ss_pred             EEEeeccchhhhccc
Confidence            999999999876543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.3e-19  Score=111.31  Aligned_cols=92  Identities=16%  Similarity=0.189  Sum_probs=77.6

Q ss_pred             CcccceeEEEEEeeC-CCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           2 GFHQDQITIEIRHST-KESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~-~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      ..|||++.++..+.. .+.++.++|++....+      ......+..+..++.|++.|+.|+|..+++|+|+||+|+|++
T Consensus        85 l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~  164 (311)
T d1r0pa_          85 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD  164 (311)
T ss_dssp             CCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             CCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC
Confidence            369999999988764 5688899998765333      223466788889999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.+||+|||+++.....
T Consensus       165 ~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         165 EKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             TTCCEEECSSGGGCCTTTT
T ss_pred             CCCCEEEecccchhhcccc
Confidence            9999999999999876544

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.5e-19  Score=109.40  Aligned_cols=91  Identities=25%  Similarity=0.388  Sum_probs=75.7

Q ss_pred             cccceeEEEEEee-----CCCceEEEeeccccccc------cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHS-----TKESLVSFREYSDSHRT------KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~ni   71 (101)
                      .|||++.++..+.     ....++.+++++.....      ....+++..+..++.|++.|+.|+|+++++|||+||+||
T Consensus        68 ~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NI  147 (305)
T d1blxa_          68 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI  147 (305)
T ss_dssp             CCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             CCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEE
Confidence            5999999988874     33567788887654211      335688999999999999999999999999999999999


Q ss_pred             EEeeCCCeEEEeeceeccccCc
Q psy7276          72 LLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        72 l~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      |++.++.++++|||+++.....
T Consensus       148 Li~~~~~~kl~dfg~~~~~~~~  169 (305)
T d1blxa_         148 LVTSSGQIKLADFGLARIYSFQ  169 (305)
T ss_dssp             EECTTCCEEECSCCSCCCCCGG
T ss_pred             EEcCCCCeeecchhhhhhhccc
Confidence            9999999999999998765443

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.2e-19  Score=111.08  Aligned_cols=91  Identities=14%  Similarity=0.143  Sum_probs=76.9

Q ss_pred             cccceeEEEEEeeCCC----ceEEEeeccccccc----cccCCCHHHHHHHHHHHHHHHHHHHH--------CCceeccC
Q psy7276           3 FHQDQITIEIRHSTKE----SLVSFREYSDSHRT----KYQRLSNDHICYFLYQILRGLKYIHS--------ANVLHRDL   66 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~----~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~h~--------~~i~~~~l   66 (101)
                      .|||++.++..+...+    .+++++|++....+    +...+++.....++.+++.|+.++|.        .+|+|+|+
T Consensus        55 ~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDl  134 (303)
T d1vjya_          55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL  134 (303)
T ss_dssp             CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCC
T ss_pred             CCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeecccc
Confidence            6999999998887543    57899998755322    33568899999999999999999996        58999999


Q ss_pred             CCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          67 KPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        67 k~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      ||+||+++.++.+||+|||+++.....
T Consensus       135 Kp~NILl~~~~~~Kl~DFGl~~~~~~~  161 (303)
T d1vjya_         135 KSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CccceEEcCCCCeEEEecCccccccCC
Confidence            999999999999999999998876544

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.9e-19  Score=111.71  Aligned_cols=91  Identities=54%  Similarity=0.709  Sum_probs=74.1

Q ss_pred             cccceeEEEEEeeCCC-----ceEEEeecccc---ccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHSTKE-----SLVSFREYSDS---HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~-----~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+....     .++.+++....   .....+.+++..+..++.|++.|+.|+|+++++|||+||+|||++
T Consensus        64 ~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~  143 (345)
T d1pmea_          64 RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN  143 (345)
T ss_dssp             CCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             CCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC
Confidence            6999999988886543     34555444322   233446799999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.+||+|||+++.....
T Consensus       144 ~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_         144 TTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             TTCCEEECCCTTCEECCGG
T ss_pred             CCCCEEEcccCceeeccCC
Confidence            9999999999998865544

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=7.1e-19  Score=107.91  Aligned_cols=90  Identities=23%  Similarity=0.330  Sum_probs=75.0

Q ss_pred             cccceeEEEEEeeC--------CCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q psy7276           3 FHQDQITIEIRHST--------KESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS   69 (101)
Q Consensus         3 ~h~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~   69 (101)
                      .|||++.+...+..        .+.++++++++.....     ....+++..+..++.|++.|+.|+|+++|+|||+||+
T Consensus        67 ~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~  146 (318)
T d3blha1          67 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAA  146 (318)
T ss_dssp             CCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             cCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCch
Confidence            59999999888755        3457888888654322     2256889999999999999999999999999999999


Q ss_pred             CeEEeeCCCeEEEeeceeccccC
Q psy7276          70 NLLLNTTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        70 nil~~~~~~~~i~dfgl~~~~~~   92 (101)
                      ||+++.++.++++|||+++....
T Consensus       147 NILl~~~~~~kl~dfg~~~~~~~  169 (318)
T d3blha1         147 NVLITRDGVLKLADFGLARAFSL  169 (318)
T ss_dssp             GEEECTTSCEEECCCTTCEECCC
T ss_pred             heeecCCCcEEeeecceeeeccc
Confidence            99999999999999999876543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.5e-19  Score=107.10  Aligned_cols=91  Identities=19%  Similarity=0.180  Sum_probs=72.1

Q ss_pred             cccceeEEEEEee-CCCceEEEeecccccccc-------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHS-TKESLVSFREYSDSHRTK-------YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+. ..+.+++++|++....+.       ...+++..+..++.+++.|+.|+|+.+++|+|++|+|++++
T Consensus        58 ~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~  137 (262)
T d1byga_          58 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS  137 (262)
T ss_dssp             CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             CCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec
Confidence            6999999999885 456789999987543221       13488999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccCc
Q psy7276          75 TTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~~   93 (101)
                      .++.++++|||+++...+.
T Consensus       138 ~~~~~kl~dfg~s~~~~~~  156 (262)
T d1byga_         138 EDNVAKVSDFGLTKEASST  156 (262)
T ss_dssp             TTSCEEECCCCC-------
T ss_pred             CCCCEeecccccceecCCC
Confidence            9999999999999876544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.77  E-value=1.3e-18  Score=105.98  Aligned_cols=91  Identities=14%  Similarity=0.126  Sum_probs=77.5

Q ss_pred             CcccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee-
Q psy7276           2 GFHQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-   75 (101)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~-   75 (101)
                      ..|++++.+...+..++..+.+++++.....     ....+++..+..++.|++.|+.++|+++++|||+||+||+++. 
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~  137 (293)
T d1csna_          58 AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRP  137 (293)
T ss_dssp             TTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCS
T ss_pred             cCCCCCCEEEEEeecCCccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCc
Confidence            4568999999999999999999998754322     2246899999999999999999999999999999999999975 


Q ss_pred             ----CCCeEEEeeceeccccC
Q psy7276          76 ----TCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        76 ----~~~~~i~dfgl~~~~~~   92 (101)
                          ++.++++|||+|+.+..
T Consensus       138 ~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_         138 NSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             SSTTTTCEEECCCTTCEESBC
T ss_pred             ccccCCceEEcccceeEEccc
Confidence                46799999999987654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=5.3e-18  Score=103.26  Aligned_cols=90  Identities=20%  Similarity=0.210  Sum_probs=72.8

Q ss_pred             ccceeEEEEEeeCCCceEEEeeccccccc-----cccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEee---
Q psy7276           4 HQDQITIEIRHSTKESLVSFREYSDSHRT-----KYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---   75 (101)
Q Consensus         4 h~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~---   75 (101)
                      |++++.+...+..+...+.+++++.....     ..+.+++..+..++.|++.|+.|+|+++++|||+||+||++..   
T Consensus        62 ~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~  141 (299)
T d1ckia_          62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK  141 (299)
T ss_dssp             STTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGG
T ss_pred             CCcccEEEEEEecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCC
Confidence            44566666667778888888988654322     2356899999999999999999999999999999999999864   


Q ss_pred             CCCeEEEeeceeccccCc
Q psy7276          76 TCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        76 ~~~~~i~dfgl~~~~~~~   93 (101)
                      +..++++|||+|+.+...
T Consensus       142 ~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_         142 GNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             TTCEEECCCSSCEECBCT
T ss_pred             CceeeeeccCcceecccc
Confidence            456999999999877544

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5.9e-18  Score=105.30  Aligned_cols=90  Identities=29%  Similarity=0.483  Sum_probs=73.9

Q ss_pred             cccceeEEEEEeeC------CCceEEEeecccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEe
Q psy7276           3 FHQDQITIEIRHST------KESLVSFREYSDSHRTK--YQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN   74 (101)
Q Consensus         3 ~h~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~   74 (101)
                      .|||++.++..+..      ...++.++|++......  ...+++..+..++.|++.|+.|+|++|++|+|+||+|++++
T Consensus        74 ~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~  153 (355)
T d2b1pa1          74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  153 (355)
T ss_dssp             CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc
Confidence            69999999998853      46788999987654332  25689999999999999999999999999999999999999


Q ss_pred             eCCCeEEEeeceeccccC
Q psy7276          75 TTCDLKFFFYFFFSFFFH   92 (101)
Q Consensus        75 ~~~~~~i~dfgl~~~~~~   92 (101)
                      .++.++++|||+++....
T Consensus       154 ~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1         154 SDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             TTCCEEECCCCC------
T ss_pred             cccceeeechhhhhcccc
Confidence            999999999998775443

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.6e-18  Score=104.93  Aligned_cols=89  Identities=37%  Similarity=0.612  Sum_probs=68.3

Q ss_pred             cccceeEEEEEeeCCC------ceEEEeecccc---ccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEE
Q psy7276           3 FHQDQITIEIRHSTKE------SLVSFREYSDS---HRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL   73 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~~------~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~   73 (101)
                      .|||++.++..+....      .++.+++....   .....+++++..+..++.|++.|+.|+|+++++|||+||+||++
T Consensus        75 ~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi  154 (348)
T d2gfsa1          75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV  154 (348)
T ss_dssp             CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc
Confidence            6999999988875432      24444443222   23344679999999999999999999999999999999999999


Q ss_pred             eeCCCeEEEeeceecccc
Q psy7276          74 NTTCDLKFFFYFFFSFFF   91 (101)
Q Consensus        74 ~~~~~~~i~dfgl~~~~~   91 (101)
                      +.++.++++|||++....
T Consensus       155 ~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1         155 NEDCELKILDFGLARHTD  172 (348)
T ss_dssp             CTTCCEEECCC----CCT
T ss_pred             cccccccccccchhcccC
Confidence            999999999999987554

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.58  E-value=2.5e-15  Score=86.23  Aligned_cols=70  Identities=16%  Similarity=0.075  Sum_probs=54.5

Q ss_pred             EEEeeccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCeEEeeCCCeEEEeeceeccccCc
Q psy7276          21 VSFREYSDSHRTKYQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKFFFYFFFSFFFHF   93 (101)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~h~~~i~~~~lk~~nil~~~~~~~~i~dfgl~~~~~~~   93 (101)
                      .+++++......  ..+++..+..++.+++.++.++|+++++|+|+||+||+++. +.++++|||+|....+.
T Consensus        86 ~lvme~~~~~~~--~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~-~~~~liDFG~a~~~~~~  155 (191)
T d1zara2          86 AVLMELIDAKEL--YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-EGIWIIDFPQSVEVGEE  155 (191)
T ss_dssp             EEEEECCCCEEG--GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET-TEEEECCCTTCEETTST
T ss_pred             EEEEEeeccccc--cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC-CCEEEEECCCcccCCCC
Confidence            456666544322  23555666778999999999999999999999999999985 45899999998876543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.45  E-value=5.3e-14  Score=87.08  Aligned_cols=89  Identities=16%  Similarity=0.202  Sum_probs=66.5

Q ss_pred             cccceeEEEEEeeCC--CceEEEeecccc--------ccccccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCe
Q psy7276           3 FHQDQITIEIRHSTK--ESLVSFREYSDS--------HRTKYQRLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNL   71 (101)
Q Consensus         3 ~h~~~~~~~~~~~~~--~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~l~~~h~-~~i~~~~lk~~ni   71 (101)
                      .|+|++.++..+...  .....++.+...        .......+.+..+..++.|++.|+.++|+ .+|+|||+||+||
T Consensus        78 ~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NI  157 (362)
T d1q8ya_          78 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV  157 (362)
T ss_dssp             HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred             CcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHe
Confidence            478899887776543  333444433211        11123568899999999999999999998 8999999999999


Q ss_pred             EEeeCCC------eEEEeeceecccc
Q psy7276          72 LLNTTCD------LKFFFYFFFSFFF   91 (101)
Q Consensus        72 l~~~~~~------~~i~dfgl~~~~~   91 (101)
                      +++.++.      ++++|||.+....
T Consensus       158 ll~~~~~~~~~~~~kl~dfg~s~~~~  183 (362)
T d1q8ya_         158 LMEIVDSPENLIQIKIADLGNACWYD  183 (362)
T ss_dssp             EEEEEETTTTEEEEEECCCTTCEETT
T ss_pred             eeeccCcccccceeeEeecccccccc
Confidence            9987653      8999999887543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.58  E-value=0.0012  Score=39.28  Aligned_cols=30  Identities=23%  Similarity=0.322  Sum_probs=25.7

Q ss_pred             CCceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          59 ANVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        59 ~~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .+++|.|+.+.|++++.+...-++||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            378999999999999987777899998643

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.69  E-value=0.0058  Score=35.03  Aligned_cols=28  Identities=21%  Similarity=0.074  Sum_probs=23.5

Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ++|.|+.+.|++++.++.+.++||+.+.
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEeeccCcceeecCCceEEEeechhcc
Confidence            7899999999999866556799997654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.78  E-value=0.0076  Score=34.35  Aligned_cols=28  Identities=18%  Similarity=0.056  Sum_probs=23.9

Q ss_pred             ceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          61 VLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        61 i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      ++|.|+.+.|+++..+..+.|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            6999999999999876667799998654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=92.39  E-value=0.024  Score=34.79  Aligned_cols=28  Identities=18%  Similarity=0.252  Sum_probs=23.8

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      .++|.|+.+.|++++.+ .++++||-.+.
T Consensus       224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a~  251 (392)
T d2pula1         224 TLIHGDLHTGSIFASEH-ETKVIDPEFAF  251 (392)
T ss_dssp             EEECSCCCGGGEEECSS-CEEECCCTTCE
T ss_pred             ceeccCCcCCceeEcCC-ceEEechhhcc
Confidence            68999999999999765 48999997655

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=88.88  E-value=0.059  Score=32.00  Aligned_cols=27  Identities=22%  Similarity=0.079  Sum_probs=21.6

Q ss_pred             CceeccCCCCCeEEeeCCCeEEEeeceec
Q psy7276          60 NVLHRDLKPSNLLLNTTCDLKFFFYFFFS   88 (101)
Q Consensus        60 ~i~~~~lk~~nil~~~~~~~~i~dfgl~~   88 (101)
                      +++|.|+.+.|++++.  ...++||+-+.
T Consensus       193 ~liHgDlh~~NvL~~~--~~~~IDFdd~~  219 (325)
T d1zyla1         193 LRLHGDCHAGNILWRD--GPMFVDLDDAR  219 (325)
T ss_dssp             EECCSSCSGGGEEESS--SEEECCCTTCC
T ss_pred             eeecCCCCcccEEEeC--CceEEechhcc
Confidence            6899999999999853  35689998544

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.93  E-value=0.12  Score=31.46  Aligned_cols=14  Identities=43%  Similarity=0.683  Sum_probs=12.6

Q ss_pred             ceeccCCCCCeEEe
Q psy7276          61 VLHRDLKPSNLLLN   74 (101)
Q Consensus        61 i~~~~lk~~nil~~   74 (101)
                      ++|+|+.+.|+++.
T Consensus       220 ~CHnDL~~~NiL~~  233 (395)
T d1nw1a_         220 FCHNDLQEGNILLP  233 (395)
T ss_dssp             EECSCCCGGGEEEE
T ss_pred             EEecCCCcccEeec
Confidence            68999999999984