Query psy7288
Match_columns 518
No_of_seqs 278 out of 1255
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 22:52:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7288.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7288hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 1.6E-46 3.5E-51 386.6 19.7 236 4-266 20-293 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 2.4E-40 5.1E-45 328.1 18.9 234 7-265 1-238 (240)
3 cd06914 GT8_GNT1 GNT1 is a fun 100.0 1.5E-36 3.2E-41 306.4 16.3 210 7-243 1-242 (278)
4 cd00505 Glyco_transf_8 Members 100.0 1.8E-31 3.8E-36 264.9 16.0 209 8-240 2-245 (246)
5 PF01501 Glyco_transf_8: Glyco 100.0 2.6E-30 5.6E-35 251.6 10.1 208 10-242 2-249 (250)
6 cd04194 GT8_A4GalT_like A4GalT 100.0 1.6E-29 3.5E-34 250.3 12.1 204 10-240 3-247 (248)
7 PRK15171 lipopolysaccharide 1, 100.0 1.1E-27 2.3E-32 248.7 16.2 219 10-265 28-287 (334)
8 cd06429 GT8_like_1 GT8_like_1 99.9 9.3E-26 2E-30 226.4 15.3 212 11-264 4-256 (257)
9 COG1442 RfaJ Lipopolysaccharid 99.9 7.1E-25 1.5E-29 225.7 15.0 207 10-243 5-248 (325)
10 cd06431 GT8_LARGE_C LARGE cata 99.9 6.5E-24 1.4E-28 215.5 16.2 222 7-264 3-268 (280)
11 cd06432 GT8_HUGT1_C_like The C 99.8 4.2E-19 9E-24 177.5 14.0 194 11-234 5-239 (248)
12 PLN02523 galacturonosyltransfe 99.8 1E-18 2.2E-23 187.8 15.6 212 19-265 258-546 (559)
13 cd06430 GT8_like_2 GT8_like_2 99.8 8.8E-19 1.9E-23 179.0 14.2 199 13-237 7-257 (304)
14 PLN02718 Probable galacturonos 99.8 5.8E-19 1.2E-23 191.6 13.0 199 14-242 319-576 (603)
15 COG5597 Alpha-N-acetylglucosam 99.7 1.7E-19 3.7E-24 180.4 0.1 211 4-244 68-341 (368)
16 PLN02769 Probable galacturonos 99.7 7.7E-18 1.7E-22 183.7 10.1 146 85-265 438-617 (629)
17 PLN02867 Probable galacturonos 99.7 5.1E-17 1.1E-21 174.8 8.4 151 79-264 323-521 (535)
18 PLN02742 Probable galacturonos 99.7 4.3E-16 9.2E-21 167.5 14.4 147 84-265 338-522 (534)
19 PLN02659 Probable galacturonos 99.7 1E-16 2.2E-21 171.9 9.2 150 80-264 323-519 (534)
20 PLN02829 Probable galacturonos 99.7 1.6E-16 3.5E-21 172.5 9.5 145 85-264 443-625 (639)
21 PLN02870 Probable galacturonos 99.6 1.4E-16 3.1E-21 170.9 6.5 149 80-264 322-517 (533)
22 PLN02910 polygalacturonate 4-a 99.6 1.6E-15 3.5E-20 164.6 9.4 145 85-264 461-643 (657)
23 KOG1950|consensus 99.4 2.1E-13 4.5E-18 143.9 2.9 207 83-350 149-369 (369)
24 PF11051 Mannosyl_trans3: Mann 98.3 2.1E-06 4.5E-11 87.3 9.4 118 8-142 3-124 (271)
25 PF03407 Nucleotid_trans: Nucl 97.4 0.001 2.2E-08 64.5 9.5 130 47-187 12-156 (212)
26 KOG1879|consensus 96.5 0.014 3E-07 69.1 10.8 156 8-169 1183-1381(1470)
27 PF05637 Glyco_transf_34: gala 93.4 0.058 1.3E-06 54.1 2.9 92 84-185 58-192 (239)
28 KOG1928|consensus 92.0 0.18 3.8E-06 53.6 4.3 55 102-159 242-298 (409)
29 KOG1950|consensus 90.6 0.017 3.6E-07 61.4 -4.9 36 86-121 113-148 (369)
30 PF00535 Glycos_transf_2: Glyc 86.3 2.5 5.4E-05 37.1 6.9 93 10-119 3-101 (169)
31 PF07801 DUF1647: Protein of u 86.0 3.8 8.3E-05 38.1 8.0 55 5-61 60-114 (142)
32 cd04186 GT_2_like_c Subfamily 85.0 11 0.00024 33.2 10.6 87 12-113 4-90 (166)
33 PHA03247 large tegument protei 82.7 52 0.0011 43.3 17.7 10 327-336 2530-2539(3151)
34 cd02525 Succinoglycan_BP_ExoA 82.5 7 0.00015 37.4 8.6 92 8-113 3-97 (249)
35 PHA03247 large tegument protei 82.5 26 0.00057 45.8 15.1 10 28-37 1930-1939(3151)
36 cd00761 Glyco_tranf_GTA_type G 82.1 6.4 0.00014 33.4 7.5 89 11-115 3-95 (156)
37 PRK15382 non-LEE encoded effec 78.5 1.3 2.8E-05 44.5 2.1 54 93-146 206-260 (326)
38 PRK15384 type III secretion sy 78.1 1.3 2.7E-05 44.7 1.8 54 93-146 211-265 (336)
39 cd06423 CESA_like CESA_like is 77.7 13 0.00027 32.5 8.1 88 13-113 5-94 (180)
40 PRK15383 type III secretion sy 77.2 1.5 3.3E-05 44.1 2.1 53 94-146 215-268 (335)
41 PLN03181 glycosyltransferase; 77.2 6.8 0.00015 42.5 7.0 69 83-152 179-263 (453)
42 cd06439 CESA_like_1 CESA_like_ 77.0 12 0.00027 36.2 8.5 93 6-113 30-125 (251)
43 cd06433 GT_2_WfgS_like WfgS an 75.8 19 0.00042 32.7 9.0 93 10-118 3-97 (202)
44 cd06421 CESA_CelA_like CESA_Ce 75.5 23 0.00049 33.6 9.7 95 7-113 3-100 (234)
45 cd06420 GT2_Chondriotin_Pol_N 75.1 15 0.00032 33.4 8.1 89 10-113 2-95 (182)
46 PF00397 WW: WW domain; Inter 74.9 1.7 3.7E-05 29.6 1.3 24 273-296 1-25 (31)
47 PTZ00449 104 kDa microneme/rho 73.9 1.1E+02 0.0023 34.7 15.0 14 16-29 131-144 (943)
48 smart00456 WW Domain with 2 co 72.6 2.6 5.7E-05 28.4 1.8 23 273-295 1-23 (32)
49 cd04192 GT_2_like_e Subfamily 72.4 18 0.0004 34.0 8.2 25 89-113 74-98 (229)
50 PRK11204 N-glycosyltransferase 71.4 14 0.00031 39.3 8.0 95 6-113 55-150 (420)
51 PRK10063 putative glycosyl tra 68.6 34 0.00074 34.1 9.5 93 7-114 3-99 (248)
52 cd06427 CESA_like_2 CESA_like_ 68.1 36 0.00079 33.0 9.4 95 7-113 3-100 (241)
53 PRK10073 putative glycosyl tra 67.9 25 0.00053 36.7 8.6 94 5-113 6-101 (328)
54 PF03314 DUF273: Protein of un 67.9 8.3 0.00018 38.3 4.7 83 86-169 27-120 (222)
55 COG0463 WcaA Glycosyltransfera 67.2 27 0.00058 30.3 7.5 94 7-114 5-99 (291)
56 PF10111 Glyco_tranf_2_2: Glyc 65.7 27 0.00058 35.4 8.2 93 20-119 17-111 (281)
57 cd04195 GT2_AmsE_like GT2_AmsE 64.5 41 0.0009 31.1 8.7 80 22-113 15-96 (201)
58 cd06434 GT2_HAS Hyaluronan syn 63.6 42 0.00092 31.9 8.8 96 8-118 3-99 (235)
59 cd06438 EpsO_like EpsO protein 63.5 44 0.00096 30.8 8.7 86 12-113 4-97 (183)
60 PLN03182 xyloglucan 6-xylosylt 63.3 20 0.00043 39.0 6.8 66 84-152 179-262 (429)
61 cd06913 beta3GnTL1_like Beta 1 62.2 49 0.0011 31.4 9.0 30 84-113 71-100 (219)
62 cd02510 pp-GalNAc-T pp-GalNAc- 61.0 56 0.0012 33.0 9.6 81 20-113 12-99 (299)
63 cd04196 GT_2_like_d Subfamily 59.0 51 0.0011 30.5 8.3 97 10-119 3-102 (214)
64 PF04488 Gly_transf_sug: Glyco 57.6 5 0.00011 34.5 1.0 20 101-120 79-99 (103)
65 cd04185 GT_2_like_b Subfamily 57.3 47 0.001 30.9 7.7 90 11-113 3-95 (202)
66 KOG3209|consensus 57.0 6.6 0.00014 45.0 2.0 61 268-338 218-278 (984)
67 cd04184 GT2_RfbC_Mx_like Myxoc 56.2 58 0.0013 30.0 8.2 92 7-113 3-99 (202)
68 PF01793 Glyco_transf_15: Glyc 56.0 84 0.0018 33.3 9.9 114 4-118 54-196 (328)
69 TIGR03469 HonB hopene-associat 55.7 51 0.0011 35.0 8.5 103 6-117 41-154 (384)
70 cd02511 Beta4Glucosyltransfera 55.6 82 0.0018 30.5 9.4 86 7-113 2-87 (229)
71 PF03071 GNT-I: GNT-I family; 55.4 93 0.002 34.3 10.4 108 7-118 95-212 (434)
72 cd00201 WW Two conserved trypt 53.9 9.3 0.0002 25.2 1.7 22 274-295 1-22 (31)
73 PRK14583 hmsR N-glycosyltransf 53.2 48 0.001 36.0 8.0 91 7-113 77-171 (444)
74 cd04179 DPM_DPG-synthase_like 52.8 36 0.00078 30.9 6.0 95 12-119 4-102 (185)
75 cd02514 GT13_GLCNAC-TI GT13_GL 50.7 95 0.0021 32.9 9.4 103 8-115 3-115 (334)
76 cd06442 DPM1_like DPM1_like re 48.1 53 0.0011 30.9 6.5 86 12-112 4-93 (224)
77 PRK11498 bcsA cellulose syntha 46.2 92 0.002 37.2 9.2 94 7-114 262-356 (852)
78 TIGR03111 glyc2_xrt_Gpos1 puta 45.9 1.5E+02 0.0032 32.2 10.3 93 6-113 50-147 (439)
79 KOG1924|consensus 44.8 60 0.0013 38.1 7.0 11 146-156 267-277 (1102)
80 cd02520 Glucosylceramide_synth 42.6 76 0.0016 29.7 6.6 96 7-113 3-102 (196)
81 cd06437 CESA_CaSu_A2 Cellulose 42.3 1.6E+02 0.0035 28.0 9.1 23 91-113 81-103 (232)
82 PF05704 Caps_synth: Capsular 42.1 59 0.0013 33.4 6.1 58 101-158 125-188 (276)
83 PTZ00449 104 kDa microneme/rho 41.7 5.9E+02 0.013 29.1 15.7 21 476-496 712-732 (943)
84 PF02485 Branch: Core-2/I-Bran 40.7 1.2E+02 0.0026 29.7 8.0 101 7-119 1-110 (244)
85 cd02522 GT_2_like_a GT_2_like_ 40.3 1.3E+02 0.0029 28.0 8.0 84 10-113 4-88 (221)
86 PRK10018 putative glycosyl tra 37.9 3.7E+02 0.0079 27.5 11.2 99 4-118 4-107 (279)
87 PLN03209 translocon at the inn 35.7 7.3E+02 0.016 28.5 14.6 19 45-63 91-109 (576)
88 KOG1891|consensus 35.6 22 0.00048 35.5 1.7 29 268-296 89-117 (271)
89 PRK13915 putative glucosyl-3-p 34.7 2E+02 0.0043 29.8 8.8 102 6-118 32-138 (306)
90 PF15324 TALPID3: Hedgehog sig 34.3 6E+02 0.013 31.3 13.1 11 470-480 1071-1081(1252)
91 PF15402 Spc7_N: N-terminus of 33.1 8.6E+02 0.019 29.6 14.3 12 133-144 304-315 (927)
92 PF15238 FAM181: FAM181 32.5 20 0.00043 37.3 0.9 18 170-187 124-141 (297)
93 COG5020 KTR1 Mannosyltransfera 31.2 1.8E+02 0.0038 31.6 7.6 55 4-59 80-137 (399)
94 KOG4472|consensus 31.2 1.8E+02 0.0038 31.6 7.6 55 4-59 80-137 (399)
95 cd04187 DPM1_like_bac Bacteria 30.6 1.9E+02 0.0042 26.2 7.2 25 95-119 78-103 (181)
96 PRK10714 undecaprenyl phosphat 30.2 4.9E+02 0.011 27.0 10.9 93 4-110 5-103 (325)
97 PF13704 Glyco_tranf_2_4: Glyc 30.0 3.1E+02 0.0068 22.5 8.1 70 36-114 19-88 (97)
98 cd06435 CESA_NdvC_like NdvC_li 29.1 3.8E+02 0.0083 25.3 9.3 16 97-112 84-99 (236)
99 PF12238 MSA-2c: Merozoite sur 28.4 1.4E+02 0.003 29.7 5.9 11 346-356 121-131 (205)
100 KOG3837|consensus 27.8 4.4E+02 0.0095 29.1 9.8 17 383-399 48-64 (523)
101 TIGR03472 HpnI hopanoid biosyn 27.7 3.9E+02 0.0084 28.1 9.7 21 93-113 122-142 (373)
102 PLN02726 dolichyl-phosphate be 27.5 3.9E+02 0.0085 25.8 9.1 21 91-111 87-107 (243)
103 KOG3259|consensus 27.2 55 0.0012 30.8 2.8 79 270-350 4-90 (163)
104 PRK14950 DNA polymerase III su 26.7 3.4E+02 0.0073 30.9 9.5 19 99-117 121-140 (585)
105 cd06436 GlcNAc-1-P_transferase 26.3 3.1E+02 0.0066 25.5 7.9 41 12-55 4-44 (191)
106 cd02526 GT2_RfbF_like RfbF is 26.0 2.5E+02 0.0054 26.5 7.3 21 97-117 75-96 (237)
107 cd02515 Glyco_transf_6 Glycosy 24.6 2.1E+02 0.0046 29.6 6.6 20 96-115 122-141 (271)
108 PF13641 Glyco_tranf_2_3: Glyc 23.3 66 0.0014 30.4 2.7 22 91-112 80-101 (228)
109 COG1216 Predicted glycosyltran 22.8 2.6E+02 0.0057 28.4 7.2 95 15-120 11-108 (305)
110 cd04188 DPG_synthase DPG_synth 21.1 1.8E+02 0.0038 27.3 5.1 30 90-119 75-105 (211)
111 PF07462 MSP1_C: Merozoite sur 20.3 2.3E+02 0.0051 32.0 6.3 11 339-349 234-244 (574)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=1.6e-46 Score=386.59 Aligned_cols=236 Identities=25% Similarity=0.390 Sum_probs=196.5
Q ss_pred CCCEEEEEE-ecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCc
Q psy7288 4 VTGTAWVTL-ATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 4 ~~~~A~VTl-~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
.+++||||+ ++|++|++||+||++|||++++.+++||||+++|+++.++.|++.|+.|++|+.+...+. ...+.+++
T Consensus 20 ~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~--~~~~~~~~ 97 (333)
T PLN00176 20 PAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPEN--QTQFAMAY 97 (333)
T ss_pred cCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCccc--ccccccch
Confidence 468999995 579999999999999999999999999999999999999999999999999988865432 22234567
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeEEcCCChhhhCCC--CcccccC------------------------CCCC----
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE--ELSAAPD------------------------AGWP---- 132 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~LVl~nIDeLF~~~--elaAapD------------------------~gwp---- 132 (518)
+..+|+||+||+|++|+||||||+|+||++||||||+++ .++|+.| .+||
T Consensus 98 ~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g 177 (333)
T PLN00176 98 YVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELG 177 (333)
T ss_pred hhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhcc
Confidence 788999999999999999999999999999999999985 3666655 2333
Q ss_pred ----CCCCceEEEEeCChHHHHHHHHHHHhcCCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCC
Q psy7288 133 ----DCFNSGVFVFKPSESTYNALVEFALVNGSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADS 208 (518)
Q Consensus 133 ----~~FNSGVmVi~Ps~~~~~~Ll~~~~~~~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~ 208 (518)
.|||||||||+|+.++|++|++++.....+.++|||+ | |.+|.+.. +.| |+
T Consensus 178 ~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~---L------N~~F~~~~-----------~~L-----p~ 232 (333)
T PLN00176 178 PPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDF---L------NMFFRDIY-----------KPI-----PP 232 (333)
T ss_pred CCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHH---H------HHHHcCcE-----------EEC-----Cc
Confidence 4999999999999999999999988776778999999 9 99999742 678 99
Q ss_pred ccccccccccccc--ccCCCceEEcccC-CCCCCCccccchhhhhhhhhHHHhhhhhhhcc
Q psy7288 209 AFGTSTITSTSSS--VSGGGLQIAHPRA-HSSPASLQQTYASAQQQHQQHLKQRSYDITTV 266 (518)
Q Consensus 209 ~YN~~~~~~y~y~--~~~~~~kIiHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~~~ 266 (518)
+||++....+.+. ...++++||||+| ..|||+...............+.++||++|+.
T Consensus 233 ~YN~~~~~~~~~~~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 293 (333)
T PLN00176 233 VYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYND 293 (333)
T ss_pred hhcCchhhhhhChhhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcc
Confidence 9999876555441 1256899999996 58999976544333334557889999999953
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=2.4e-40 Score=328.13 Aligned_cols=234 Identities=40% Similarity=0.608 Sum_probs=196.9
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhh
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGIT 86 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~t 86 (518)
+||||+++|++|+.+|+|+++||++++++++++|+++.+++++.++.|++.+..++.|+.++..+... ...+.++..+
T Consensus 1 ~ay~t~~~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~--~~~~~~~~~~ 78 (240)
T cd02537 1 EAYVTLLTNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSAN--LLKRPRFKDT 78 (240)
T ss_pred CEEEEEecChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhh--hccchHHHHH
Confidence 49999999999999999999999999999999999999999999999999999988888877554322 1123456789
Q ss_pred hHhHhhhhccCcCeEEEecCCeEEcCCChhhhCC-CCcccccCCCCCCCCCceEEEEeCChHHHHHHHHHHHhcCCCCcC
Q psy7288 87 FTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDR-EELSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFALVNGSFDDA 165 (518)
Q Consensus 87 ftKL~~w~L~eydKVVYLDaD~LVl~nIDeLF~~-~elaAapD~gwp~~FNSGVmVi~Ps~~~~~~Ll~~~~~~~s~d~~ 165 (518)
|+||++|.+.+|+||||||+|+||++|||+||++ +.++|++|..|..|||||||+|+|+...++++++.+.+..++.++
T Consensus 79 ~~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
T cd02537 79 YTKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGG 158 (240)
T ss_pred hHHHHhccccccceEEEEeCCeeEccCHHHHhCCCCceeeecccCccccccceEEEEcCCHHHHHHHHHHHhccCCCCCC
Confidence 9999999999999999999999999999999999 578999998888899999999999999999999999887778899
Q ss_pred ccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCccccccccccccc---ccCCCceEEcccCCCCCCCcc
Q psy7288 166 TRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTSTITSTSSS---VSGGGLQIAHPRAHSSPASLQ 242 (518)
Q Consensus 166 DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~~~~~y~y~---~~~~~~kIiHf~g~~KPW~~~ 242 (518)
||++ | |.+|.+.. .+..| +.+||++....+.+. ....+++||||.|..|||+..
T Consensus 159 DQdi---L------N~~~~~~~---------~~~~l-----~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~~ 215 (240)
T cd02537 159 DQGL---L------NSYFSDRG---------IWKRL-----PFTYNALKPLRYLHPEALWFGDEIKVVHFIGGDKPWSWW 215 (240)
T ss_pred CHHH---H------HHHHcCCC---------CEeEC-----CcceeeehhhhccCchhhcccCCcEEEEEeCCCCCCCCC
Confidence 9999 9 99998741 11567 999999875543322 235689999999999999986
Q ss_pred ccchhhhhhhhhHHHhhhhhhhc
Q psy7288 243 QTYASAQQQHQQHLKQRSYDITT 265 (518)
Q Consensus 243 ~~~~~~~~~~~~~~~~~WWdi~~ 265 (518)
.............+++.||++|.
T Consensus 216 ~~~~~~~~~~~~~~~~~w~~~~~ 238 (240)
T cd02537 216 RDPETKEKDDYNELHQWWWDIYD 238 (240)
T ss_pred cCCCcccccchHHHHHHHHHHHh
Confidence 65433222234678999999994
No 3
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=1.5e-36 Score=306.39 Aligned_cols=210 Identities=23% Similarity=0.277 Sum_probs=163.1
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH-------HhcCCeEEEEeeeCCCchhhhcccC
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNEL-------LKVFNFVKEVDVFDSRDETNLRLLS 79 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L-------~~~~~~v~~V~~l~~~d~~~l~~~~ 79 (518)
+|||||+||+.|++||+||++||+++++++++|||++++++......+ ...+..++.|+.+..+. .
T Consensus 1 fAYvtl~Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~-------~ 73 (278)
T cd06914 1 YAYVNYATNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG-------G 73 (278)
T ss_pred CeEEEEecChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC-------C
Confidence 699999999999999999999999999999999999999886543322 23345555555433321 3
Q ss_pred CCchhhhhHhHhhhhccCcCeEEEecCCeEEcCCChhhhCCC-C-cccccCCCCCCCCCceEEEEeCChHHHHHHHHHHH
Q psy7288 80 RPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE-E-LSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFAL 157 (518)
Q Consensus 80 rp~~~~tftKL~~w~L~eydKVVYLDaD~LVl~nIDeLF~~~-e-laAapD~gwp~~FNSGVmVi~Ps~~~~~~Ll~~~~ 157 (518)
++++..+|+||++|+|++|+||||||||+||++||||||+++ . ..|+|+.+| |||||||||+|+.++|++|++++.
T Consensus 74 ~~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~--~FNSGvmvi~ps~~~~~~l~~~~~ 151 (278)
T cd06914 74 DAYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYW--KFASHLMVIKPSKEAFKELMTEIL 151 (278)
T ss_pred CccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcc--eecceeEEEeCCHHHHHHHHHHHH
Confidence 456778899999999999999999999999999999999997 2 346788777 999999999999999999999998
Q ss_pred hcCCC--CcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCc-cccccccccc-------------cc
Q psy7288 158 VNGSF--DDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSA-FGTSTITSTS-------------SS 221 (518)
Q Consensus 158 ~~~s~--d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~-YN~~~~~~y~-------------y~ 221 (518)
+..+. .++|||+ | |.+|.++... ..+ .+..| |.+ ||+....... +.
T Consensus 152 ~~~~~~~~~~DQdi---L------N~~~~~~~~~-~~~---~~~~L-----p~~~y~llt~~~r~~~~~~~l~~~~~~~~ 213 (278)
T cd06914 152 PAYLNKKNEYDMDL---I------NEEFYNSKQL-FKP---SVLVL-----PHRQYGLLTGEFREKLHKSFLSNAQHLYE 213 (278)
T ss_pred HhcccCCCCCChHH---H------HHHHhCCccc-cCc---ceEEc-----CccccccCChhhcccCHHHhhcccccccc
Confidence 76543 5789999 9 9999997211 000 11445 775 8877653211 11
Q ss_pred cc-----CCCceEEcccCC--CCCCCccc
Q psy7288 222 VS-----GGGLQIAHPRAH--SSPASLQQ 243 (518)
Q Consensus 222 ~~-----~~~~kIiHf~g~--~KPW~~~~ 243 (518)
.+ ..++|+|||+.. .|||....
T Consensus 214 ~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 214 KWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred ccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 22 267999999975 69999854
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.97 E-value=1.8e-31 Score=264.87 Aligned_cols=209 Identities=31% Similarity=0.412 Sum_probs=155.6
Q ss_pred EEEEEecChhhHHHHHHHHHHHHhhCCC-CeEEEEECCCCCHHHHHHHHhcC----CeEEEEeeeCCCchhhhcccCCCc
Q psy7288 8 AWVTLATNDSYALGALVVANSLKRVNTV-HDLAILITPGVTLAMKNELLKVF----NFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 8 A~VTl~tnd~Yl~ga~VL~~SLr~~~s~-~~lvvLvt~~vs~~~r~~L~~~~----~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
++|++++|++|+.++.|+++||+++++. +.++| ++.+++++.++.|+.+. ..+..+. ++...........+..
T Consensus 2 ~i~~~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~i-l~~~is~~~~~~L~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~ 79 (246)
T cd00505 2 AIVIVATGDEYLRGAIVLMKSVLRHRTKPLRFHV-LTNPLSDTFKAALDNLRKLYNFNYELIP-VDILDSVDSEHLKRPI 79 (246)
T ss_pred eEEEEecCcchhHHHHHHHHHHHHhCCCCeEEEE-EEccccHHHHHHHHHHHhccCceEEEEe-ccccCcchhhhhcCcc
Confidence 7899999999999999999999999875 34444 45689999999998753 2222222 2222211111111233
Q ss_pred hhhhhHhHhhhhccC-cCeEEEecCCeEEcCCChhhhCCC----CcccccCCCC----------------CCCCCceEEE
Q psy7288 83 LGITFTKIHAWRLTQ-YSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAGW----------------PDCFNSGVFV 141 (518)
Q Consensus 83 ~~~tftKL~~w~L~e-ydKVVYLDaD~LVl~nIDeLF~~~----elaAapD~gw----------------p~~FNSGVmV 141 (518)
...+|+||+++.|.+ |+||||||+|+||++||++||+++ .++|++|.+. ..||||||||
T Consensus 80 ~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVml 159 (246)
T cd00505 80 KIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFV 159 (246)
T ss_pred ccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeEE
Confidence 467999999999876 999999999999999999999986 4677776431 2599999999
Q ss_pred EeCChHHHHHHHHHHHh-----cCCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCcccccccc
Q psy7288 142 FKPSESTYNALVEFALV-----NGSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTSTIT 216 (518)
Q Consensus 142 i~Ps~~~~~~Ll~~~~~-----~~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~~~~ 216 (518)
|+++.++++++++.+.+ ..++.++|||+ | |.+|.+... .+..| |.+||++...
T Consensus 160 inl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~---L------N~~~~~~~~--------~i~~L-----~~~wN~~~~~ 217 (246)
T cd00505 160 VNLSKERRNQLLKVALEKWLQSLSSLSGGDQDL---L------NTFFKQVPF--------IVKSL-----PCIWNVRLTG 217 (246)
T ss_pred EechHHHHHHHHHHHHHHHHhhcccCccCCcHH---H------HHHHhcCCC--------eEEEC-----CCeeeEEecC
Confidence 99999998887765433 23577899999 9 999987510 11677 9999998765
Q ss_pred cccc----cccCCCceEEcccCCCCCCC
Q psy7288 217 STSS----SVSGGGLQIAHPRAHSSPAS 240 (518)
Q Consensus 217 ~y~y----~~~~~~~kIiHf~g~~KPW~ 240 (518)
.+.+ .....+++||||.|+.|||+
T Consensus 218 ~~~~~~~~~~~~~~~~iiHy~g~~KPW~ 245 (246)
T cd00505 218 CYRSLNCFKAFVKNAKVIHFNGPTKPWN 245 (246)
T ss_pred ccccccchhhhcCCCEEEEeCCCCCCCC
Confidence 4332 22467899999999999996
No 5
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.96 E-value=2.6e-30 Score=251.58 Aligned_cols=208 Identities=25% Similarity=0.301 Sum_probs=149.7
Q ss_pred EEEecChhhHHHHHHHHHHHHhhCCC-CeE-EEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhh-----h-cccCCC
Q psy7288 10 VTLATNDSYALGALVVANSLKRVNTV-HDL-AILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETN-----L-RLLSRP 81 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~s~-~~l-vvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~-----l-~~~~rp 81 (518)
|++++|++|+.+++|+++||++++++ ..+ +++++++++++.++.|++.+..+..+..+...+... . ....+.
T Consensus 2 i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T PF01501_consen 2 IVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRH 81 (250)
T ss_dssp EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTC
T ss_pred EEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccc
Confidence 67899999999999999999999885 444 455678999999999998877654443332222211 1 112223
Q ss_pred chhhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC----CcccccC------------------CCCCCCCCce
Q psy7288 82 DLGITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE----ELSAAPD------------------AGWPDCFNSG 138 (518)
Q Consensus 82 ~~~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~----elaAapD------------------~gwp~~FNSG 138 (518)
....+|.||++|++ .+|+||||||+|+||++||++||+++ .++|+.| .+...|||||
T Consensus 82 ~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsG 161 (250)
T PF01501_consen 82 FSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSG 161 (250)
T ss_dssp GGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEE
T ss_pred ccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCc
Confidence 34689999999998 99999999999999999999999964 2445544 1235899999
Q ss_pred EEEEeCChHHHHHHHHHHHh----c-CCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCccccc
Q psy7288 139 VFVFKPSESTYNALVEFALV----N-GSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTS 213 (518)
Q Consensus 139 VmVi~Ps~~~~~~Ll~~~~~----~-~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~ 213 (518)
||||+++.++++++.+.+.+ . ..+.++||++ | |.+|.+.. ..| |..||+.
T Consensus 162 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~---l------n~~~~~~~-----------~~L-----~~~~N~~ 216 (250)
T PF01501_consen 162 VMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDI---L------NIVFYGNI-----------KPL-----PCRYNCQ 216 (250)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHH---H------HHHHTTGE-----------EEE-----EGGGSEE
T ss_pred EEEEeechhhhhhhhhhhhhhhhhcccccCcCchHH---H------hhhcccee-----------EEE-----Cchhccc
Confidence 99999999998888776643 2 2467899999 9 99998643 678 9999998
Q ss_pred cccc-ccc---cccCCCceEEcccCCCCCCCcc
Q psy7288 214 TITS-TSS---SVSGGGLQIAHPRAHSSPASLQ 242 (518)
Q Consensus 214 ~~~~-y~y---~~~~~~~kIiHf~g~~KPW~~~ 242 (518)
.... +.. .....+++||||+|..|||...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 217 PSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred cccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 7544 111 3346899999999999999863
No 6
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.96 E-value=1.6e-29 Score=250.32 Aligned_cols=204 Identities=20% Similarity=0.221 Sum_probs=151.9
Q ss_pred EEEecChhhHHHHHHHHHHHHhhCCC--CeEEEEECCCCCHHHHHHHHhc----CCeEEEEeeeCCCchhhhcccCCCch
Q psy7288 10 VTLATNDSYALGALVVANSLKRVNTV--HDLAILITPGVTLAMKNELLKV----FNFVKEVDVFDSRDETNLRLLSRPDL 83 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~s~--~~lvvLvt~~vs~~~r~~L~~~----~~~v~~V~~l~~~d~~~l~~~~rp~~ 83 (518)
|.+++|++|+.+++|+++||+++++. ++++|+ +.+++++.++.|++. +..++.+. ++..+........+...
T Consensus 3 I~~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il-~~~is~~~~~~L~~~~~~~~~~i~~~~-i~~~~~~~~~~~~~~~~ 80 (248)
T cd04194 3 IVFAIDDNYAPYLAVTIKSILANNSKRDYDFYIL-NDDISEENKKKLKELLKKYNSSIEFIK-IDNDDFKFFPATTDHIS 80 (248)
T ss_pred EEEEecHhhHHHHHHHHHHHHhcCCCCceEEEEE-eCCCCHHHHHHHHHHHHhcCCeEEEEE-cCHHHHhcCCccccccc
Confidence 45788999999999999999999884 455555 468999999999887 33443332 33322222110112233
Q ss_pred hhhhHhHhhhhccC-cCeEEEecCCeEEcCCChhhhCCC----CcccccCCCC---------------CCCCCceEEEEe
Q psy7288 84 GITFTKIHAWRLTQ-YSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAGW---------------PDCFNSGVFVFK 143 (518)
Q Consensus 84 ~~tftKL~~w~L~e-ydKVVYLDaD~LVl~nIDeLF~~~----elaAapD~gw---------------p~~FNSGVmVi~ 143 (518)
..+|.||+++.+.. |+||||||+|+||++||++||+++ .++|++|.++ ..||||||||++
T Consensus 81 ~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~n 160 (248)
T cd04194 81 YATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLIN 160 (248)
T ss_pred HHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecchhee
Confidence 57899999999875 999999999999999999999985 3667777542 269999999999
Q ss_pred CChHHHHHH----HHHHHhcC-CCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCcccccccccc
Q psy7288 144 PSESTYNAL----VEFALVNG-SFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTSTITST 218 (518)
Q Consensus 144 Ps~~~~~~L----l~~~~~~~-s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~~~~~y 218 (518)
++.++.+++ ++++.+.. .+.++||++ | |.+|.+.. ..| |.+||++.....
T Consensus 161 l~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~---L------N~~~~~~~-----------~~L-----~~~~N~~~~~~~ 215 (248)
T cd04194 161 LKKWREENITEKLLELIKEYGGRLIYPDQDI---L------NAVLKDKI-----------LYL-----PPRYNFQTGFYY 215 (248)
T ss_pred HHHHHHhhhHHHHHHHHHhCCCceeeCChHH---H------HHHHhCCe-----------EEc-----CcccccchhHhH
Confidence 998775544 44555443 467899999 9 99998742 678 999999876432
Q ss_pred cc----------cccCCCceEEcccCCCCCCC
Q psy7288 219 SS----------SVSGGGLQIAHPRAHSSPAS 240 (518)
Q Consensus 219 ~y----------~~~~~~~kIiHf~g~~KPW~ 240 (518)
.+ .....+++||||+|..|||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 216 LLKKKSKEEQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred HhhccchhHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 22 12367899999999999997
No 7
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.95 E-value=1.1e-27 Score=248.75 Aligned_cols=219 Identities=14% Similarity=0.134 Sum_probs=157.4
Q ss_pred EEEecChhhHHHHHHHHHHHHhhCCCCe--EEEEECCCCCHHHHHHHHhc----CCeEEEEeeeCCCchhhhcccCCCch
Q psy7288 10 VTLATNDSYALGALVVANSLKRVNTVHD--LAILITPGVTLAMKNELLKV----FNFVKEVDVFDSRDETNLRLLSRPDL 83 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~s~~~--lvvLvt~~vs~~~r~~L~~~----~~~v~~V~~l~~~d~~~l~~~~rp~~ 83 (518)
|.+++|++|+.++.|++.||..|+++.. ++|+ +++++++.++.|+.+ +..+. +..++......+... .-.-
T Consensus 28 Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il-~~~is~e~~~~l~~l~~~~~~~i~-~~~id~~~~~~~~~~-~~~s 104 (334)
T PRK15171 28 IAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVF-TDYISDADKQRFSALAKQYNTRIN-IYLINCERLKSLPST-KNWT 104 (334)
T ss_pred EEEECcHhhHHHHHHHHHHHHHhCCCCCEEEEEE-eCCCCHHHHHHHHHHHHhcCCeEE-EEEeCHHHHhCCccc-CcCC
Confidence 5567899999999999999999887654 4444 569999998877654 33333 333333222222111 1123
Q ss_pred hhhhHhHhhhhcc--CcCeEEEecCCeEEcCCChhhhCCC----Cccccc-CC------------CCC----CCCCceEE
Q psy7288 84 GITFTKIHAWRLT--QYSKCVFLDADVLIVQNCDELFDRE----ELSAAP-DA------------GWP----DCFNSGVF 140 (518)
Q Consensus 84 ~~tftKL~~w~L~--eydKVVYLDaD~LVl~nIDeLF~~~----elaAap-D~------------gwp----~~FNSGVm 140 (518)
..+|.||.+.++. +++||||||+|+||++||++||+++ .++|+. |. +++ .|||||||
T Consensus 105 ~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVl 184 (334)
T PRK15171 105 YATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFL 184 (334)
T ss_pred HHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceE
Confidence 5799999999975 6999999999999999999999985 366653 22 112 49999999
Q ss_pred EEeCChHHHHHHHHH----HHhc---CCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCccccc
Q psy7288 141 VFKPSESTYNALVEF----ALVN---GSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTS 213 (518)
Q Consensus 141 Vi~Ps~~~~~~Ll~~----~~~~---~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~ 213 (518)
|||...++.+++.+. +... +.+.++|||+ | |.+|.+.. ..| +.+||++
T Consensus 185 liNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDi---L------N~~~~~~~-----------~~L-----~~~wN~~ 239 (334)
T PRK15171 185 LINIPAWAQENISAKAIEMLADPEIVSRITHLDQDV---L------NILLAGKV-----------KFI-----DAKYNTQ 239 (334)
T ss_pred EEcHHHHHHhhHHHHHHHHHhccccccceeecChhH---H------HHHHcCCe-----------EEC-----CHhhCCc
Confidence 999998876665544 4332 3567899999 9 99998743 678 9999987
Q ss_pred ccccccc-----cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhhc
Q psy7288 214 TITSTSS-----SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDITT 265 (518)
Q Consensus 214 ~~~~y~y-----~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~~ 265 (518)
....+.. .....+++||||+|+.|||+.... ....+.||.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~---------~~~~~~f~~~~~ 287 (334)
T PRK15171 240 FSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWAD---------YPVSQYFLKAKE 287 (334)
T ss_pred cchhHHHHhcccccccCCCEEEEECCCCCCCCCCCC---------CchHHHHHHHHh
Confidence 6443322 112457899999999999986543 245688899884
No 8
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.93 E-value=9.3e-26 Score=226.37 Aligned_cols=212 Identities=17% Similarity=0.142 Sum_probs=143.3
Q ss_pred EEecChhhHHHHHHHHHHHHhhCCC-CeEEE-EECCCCCHHHHHHHHhcC---CeEEEEeeeCCCchhhhcc--------
Q psy7288 11 TLATNDSYALGALVVANSLKRVNTV-HDLAI-LITPGVTLAMKNELLKVF---NFVKEVDVFDSRDETNLRL-------- 77 (518)
Q Consensus 11 Tl~tnd~Yl~ga~VL~~SLr~~~s~-~~lvv-Lvt~~vs~~~r~~L~~~~---~~v~~V~~l~~~d~~~l~~-------- 77 (518)
.+++| +|+. ++|.+.|+..++++ .++++ +++++++.+..+.+.... ...+.+..++.........
T Consensus 4 v~~~D-n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 81 (257)
T cd06429 4 VIFSD-NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLE 81 (257)
T ss_pred EEEec-chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhh
Confidence 44566 9995 55555566666654 66554 457889987776665543 2222333333211111100
Q ss_pred ---------cCCCch--hhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC----CcccccCCCCCCCCCceEEE
Q psy7288 78 ---------LSRPDL--GITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAGWPDCFNSGVFV 141 (518)
Q Consensus 78 ---------~~rp~~--~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~----elaAapD~gwp~~FNSGVmV 141 (518)
..++.. ..+|.||.+.++ .+++||||||||+||.+||++||+++ .++|++| ||||||||
T Consensus 82 ~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d-----yfNsGV~l 156 (257)
T cd06429 82 SEADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET-----SWNPGVNV 156 (257)
T ss_pred ccccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-----hcccceEE
Confidence 012222 478999999996 47899999999999999999999986 2455555 89999999
Q ss_pred EeCChHHHHHHH----HHHHhcC-----CCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCcccc
Q psy7288 142 FKPSESTYNALV----EFALVNG-----SFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGT 212 (518)
Q Consensus 142 i~Ps~~~~~~Ll----~~~~~~~-----s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~ 212 (518)
|++..++.+++. +.+.... .++++||++ | |..|.+.. +.| +.+||+
T Consensus 157 inl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~---l------n~~~~~~~-----------~~L-----~~~wN~ 211 (257)
T cd06429 157 VNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPP---G------LIVFYGLT-----------SPL-----DPSWHV 211 (257)
T ss_pred EeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccH---H------HHHccCee-----------EEC-----ChHHcc
Confidence 999988866553 3333321 256789999 9 99998753 577 899998
Q ss_pred cccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhh
Q psy7288 213 STITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDIT 264 (518)
Q Consensus 213 ~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~ 264 (518)
.. ..+.+ .....+++||||.|..|||+.... ..+.+.||.++
T Consensus 212 ~~-l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~---------~~~~~~w~~yl 256 (257)
T cd06429 212 RG-LGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAI---------PSYKELWEKYL 256 (257)
T ss_pred cC-CcccccccccccCCcEEEEECCCCCCcCCCCC---------ChHHHHHHHHh
Confidence 73 22322 234568999999999999997642 35788899875
No 9
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=7.1e-25 Score=225.74 Aligned_cols=207 Identities=19% Similarity=0.220 Sum_probs=158.0
Q ss_pred EEEecChhhHHHHHHHHHHHHhhCC--CCeEEEEECCCCCHHHHHHHHhc---CCeEEEEeeeCCCchhhhcccCCCch-
Q psy7288 10 VTLATNDSYALGALVVANSLKRVNT--VHDLAILITPGVTLAMKNELLKV---FNFVKEVDVFDSRDETNLRLLSRPDL- 83 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~s--~~~lvvLvt~~vs~~~r~~L~~~---~~~v~~V~~l~~~d~~~l~~~~rp~~- 83 (518)
|.+++|.+|+.||.|.++||..|+. .+.++|++. +++++..+.|++. +..-+.+..++......... ...++
T Consensus 5 Iv~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~~-~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~~~~-~~~~~s 82 (325)
T COG1442 5 IAFAFDKNYLIPAGVSIYSLLEHNRKIFYKFHILVD-GLNEEDKKKLNETAEPFKSFIVLEVIDIEPFLDYPP-FTKRFS 82 (325)
T ss_pred EEEEcccccchhHHHHHHHHHHhCccccEEEEEEec-CCCHHHHHHHHHHHHhhccceeeEEEechhhhcccc-cccchH
Confidence 4568899999999999999999998 677887764 9999998888763 22222333444332222220 12233
Q ss_pred hhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC----CcccccCCC----------------CCCCCCceEEEE
Q psy7288 84 GITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG----------------WPDCFNSGVFVF 142 (518)
Q Consensus 84 ~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~----elaAapD~g----------------wp~~FNSGVmVi 142 (518)
..+|.|+++.++ .+|+|+||||+|+||+++|++||+++ .++||.|.+ ...|||+|||++
T Consensus 83 ~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG~lli 162 (325)
T COG1442 83 KMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAGVLLI 162 (325)
T ss_pred HHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccceeee
Confidence 479999999997 57899999999999999999999986 367777742 237899999999
Q ss_pred eCChHHHHHHHHHHHh-----cCCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCccccccccc
Q psy7288 143 KPSESTYNALVEFALV-----NGSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTSTITS 217 (518)
Q Consensus 143 ~Ps~~~~~~Ll~~~~~-----~~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~~~~~ 217 (518)
|...|+.+++.+.+.+ ...+..+|||+ | |.+|.+.. ..| +.+||++....
T Consensus 163 nl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdi---L------N~i~~~~~-----------~~L-----~~~YN~~~~~~ 217 (325)
T COG1442 163 NLKLWREENIFEKLIELLKDKENDLLYPDQDI---L------NMIFEDRV-----------LEL-----PIRYNAIPYID 217 (325)
T ss_pred hHHHHHHhhhHHHHHHHHhccccccCCccccH---H------HHHHHhhh-----------hcc-----Ccccceeehhh
Confidence 9999887777665543 23677899999 9 99998853 567 99999997654
Q ss_pred ccc-----cccCCCceEEcccCCCCCCCccc
Q psy7288 218 TSS-----SVSGGGLQIAHPRAHSSPASLQQ 243 (518)
Q Consensus 218 y~y-----~~~~~~~kIiHf~g~~KPW~~~~ 243 (518)
+.. ..++.++.|+||+|+.|||+...
T Consensus 218 ~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~ 248 (325)
T COG1442 218 SQLKDKYIYPFGDDPVILHYAGPTKPWHSDS 248 (325)
T ss_pred hccchhhhccCCCCceEEEecCCCCCCcCcc
Confidence 321 34678899999999999999875
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.91 E-value=6.5e-24 Score=215.54 Aligned_cols=222 Identities=13% Similarity=0.135 Sum_probs=146.4
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhCCC-CeEEEEECCCCCHHHHHHHHhc----CCeEEEEeeeCCCch-hhhcccCC
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVNTV-HDLAILITPGVTLAMKNELLKV----FNFVKEVDVFDSRDE-TNLRLLSR 80 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~-~~lvvLvt~~vs~~~r~~L~~~----~~~v~~V~~l~~~d~-~~l~~~~r 80 (518)
.|+|+. . .+|+.++.|++.||..|+.. +.++| ++++++++.++.|.+. ++.+..+. ..+. ..+.....
T Consensus 3 ~~iv~~-~-~~y~~~~~~~i~Sil~n~~~~~~fhi-i~d~~s~~~~~~l~~~~~~~~~~i~f~~---i~~~~~~~~~~~~ 76 (280)
T cd06431 3 VAIVCA-G-YNASRDVVTLVKSVLFYRRNPLHFHL-ITDEIARRILATLFQTWMVPAVEVSFYN---AEELKSRVSWIPN 76 (280)
T ss_pred EEEEEc-c-CCcHHHHHHHHHHHHHcCCCCEEEEE-EECCcCHHHHHHHHHhccccCcEEEEEE---hHHhhhhhccCcc
Confidence 355543 3 99999999999999998632 34444 4568999988888654 33433332 2111 11111111
Q ss_pred Cchh-h-hhHhHhhhhcc--CcCeEEEecCCeEEcCCChhhhCC-----C-Cccc-ccCC-------------CCC---C
Q psy7288 81 PDLG-I-TFTKIHAWRLT--QYSKCVFLDADVLIVQNCDELFDR-----E-ELSA-APDA-------------GWP---D 133 (518)
Q Consensus 81 p~~~-~-tftKL~~w~L~--eydKVVYLDaD~LVl~nIDeLF~~-----~-elaA-apD~-------------gwp---~ 133 (518)
..+. . +|.||.+.++. +++||||||+|+||++||++||++ + .++| +.|. .|+ .
T Consensus 77 ~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~ 156 (280)
T cd06431 77 KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGR 156 (280)
T ss_pred cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCccccc
Confidence 1222 2 56899999975 499999999999999999999986 1 2333 3332 112 4
Q ss_pred CCCceEEEEeCChHHHHHHHHHHH----h----cCCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCC
Q psy7288 134 CFNSGVFVFKPSESTYNALVEFAL----V----NGSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENS 205 (518)
Q Consensus 134 ~FNSGVmVi~Ps~~~~~~Ll~~~~----~----~~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s 205 (518)
|||||||+|+...++.+++.+.+. + .+.+.++|||+ | |.+|.+.. .+ +..|
T Consensus 157 yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDi---L------N~v~~~~~--~~------~~~L---- 215 (280)
T cd06431 157 GFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDI---F------NAVIKQNP--FL------VYQL---- 215 (280)
T ss_pred ceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHH---H------HHHHcCCc--ce------eEEC----
Confidence 999999999999888666655442 2 24567899999 9 99997631 00 1567
Q ss_pred CCCcccccccccccc-c--ccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhh
Q psy7288 206 ADSAFGTSTITSTSS-S--VSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDIT 264 (518)
Q Consensus 206 ~p~~YN~~~~~~y~y-~--~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~ 264 (518)
|.+||++....... . ....++.||||+|+.|||...... ..++..|-.+.
T Consensus 216 -~~~wN~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~--------~~~~~~~~~~~ 268 (280)
T cd06431 216 -PCAWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHV--------EFFRNLYLTFL 268 (280)
T ss_pred -CCccccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCC--------hHHHHHHHHHH
Confidence 99999886422111 1 124689999999999999865321 35566666655
No 11
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.80 E-value=4.2e-19 Score=177.54 Aligned_cols=194 Identities=13% Similarity=0.045 Sum_probs=133.5
Q ss_pred EEecChhhHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHhc----CCeEEEEeeeCCCch-hhhcccCCCchh
Q psy7288 11 TLATNDSYALGALVVANSLKRVNT-VHDLAILITPGVTLAMKNELLKV----FNFVKEVDVFDSRDE-TNLRLLSRPDLG 84 (518)
Q Consensus 11 Tl~tnd~Yl~ga~VL~~SLr~~~s-~~~lvvLvt~~vs~~~r~~L~~~----~~~v~~V~~l~~~d~-~~l~~~~rp~~~ 84 (518)
++++++.|+.++.|++.||..|+. .+.++|+. .+++++.++.|.+. +..+..+.+ +.... ...... .+..
T Consensus 5 ~~~~~~~y~~~~~v~l~Sll~nn~~~~~fyil~-~~is~e~~~~l~~~~~~~~~~i~~i~i-~~~~~~~~~~~~--~~~~ 80 (248)
T cd06432 5 SVASGHLYERFLRIMMLSVMKNTKSPVKFWFIK-NFLSPQFKEFLPEMAKEYGFEYELVTY-KWPRWLHKQTEK--QRII 80 (248)
T ss_pred EEcCcHHHHHHHHHHHHHHHHcCCCCEEEEEEe-CCCCHHHHHHHHHHHHHhCCceEEEEe-cChhhhhccccc--chhH
Confidence 348899999999999999999863 35556555 68999998888763 444443332 31111 111000 0112
Q ss_pred hhhHhHhhhhc-c-CcCeEEEecCCeEEcCCChhhhCCC---C-cccccCCC---------------C------CCCCCc
Q psy7288 85 ITFTKIHAWRL-T-QYSKCVFLDADVLIVQNCDELFDRE---E-LSAAPDAG---------------W------PDCFNS 137 (518)
Q Consensus 85 ~tftKL~~w~L-~-eydKVVYLDaD~LVl~nIDeLF~~~---e-laAapD~g---------------w------p~~FNS 137 (518)
.+|.+|.+-.+ . +++||||||+|+||+++|++||+++ . ++|++|.+ | ..||||
T Consensus 81 ~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNS 160 (248)
T cd06432 81 WGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHIS 160 (248)
T ss_pred HHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccce
Confidence 35677777654 3 5999999999999999999999986 2 44554421 1 139999
Q ss_pred eEEEEeCChHHHHHHHHHHH-------hc-CCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCc
Q psy7288 138 GVFVFKPSESTYNALVEFAL-------VN-GSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSA 209 (518)
Q Consensus 138 GVmVi~Ps~~~~~~Ll~~~~-------~~-~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~ 209 (518)
|||+||...++.+++.+.+. ++ .++.+.|||+ | |..+.+.. +..| |.+
T Consensus 161 GVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDi---L------N~v~~~~~----------i~~L-----p~~ 216 (248)
T cd06432 161 ALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDL---P------NNMQHQVP----------IFSL-----PQE 216 (248)
T ss_pred eeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchh---h------HHHhccCC----------eEEC-----ChH
Confidence 99999999988777655332 22 3577899999 9 99997631 1577 999
Q ss_pred ccccccccccccccCCCceEEcccC
Q psy7288 210 FGTSTITSTSSSVSGGGLQIAHPRA 234 (518)
Q Consensus 210 YN~~~~~~y~y~~~~~~~kIiHf~g 234 (518)
||.... ++-+...+.+++|||..
T Consensus 217 w~~~~~--~~~~~~~~~~~~~~~~~ 239 (248)
T cd06432 217 WLWCET--WCSDESKKKAKTIDLCN 239 (248)
T ss_pred HHHHHH--HhcccccCccceeeccc
Confidence 987643 22234478899999975
No 12
>PLN02523 galacturonosyltransferase
Probab=99.79 E-value=1e-18 Score=187.77 Aligned_cols=212 Identities=16% Similarity=0.150 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHhh-CCCCeEEE-EECCCCCHHHHHHHHhcC---CeEEEEeeeCC-C--c---hhh---hc--------
Q psy7288 19 ALGALVVANSLKRV-NTVHDLAI-LITPGVTLAMKNELLKVF---NFVKEVDVFDS-R--D---ETN---LR-------- 76 (518)
Q Consensus 19 l~ga~VL~~SLr~~-~s~~~lvv-Lvt~~vs~~~r~~L~~~~---~~v~~V~~l~~-~--d---~~~---l~-------- 76 (518)
+.+|.|++.|+..| +...++|+ ++|++++......+-... ...++|..|+. . . ..- +.
T Consensus 258 vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~~~ 337 (559)
T PLN02523 258 VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQKFY 337 (559)
T ss_pred chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhhhh
Confidence 89999999999988 44555554 567888865554443322 22233333321 0 0 000 00
Q ss_pred ---------------ccCCCch--hhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC---C-cccccCCC----
Q psy7288 77 ---------------LLSRPDL--GITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE---E-LSAAPDAG---- 130 (518)
Q Consensus 77 ---------------~~~rp~~--~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~---e-laAapD~g---- 130 (518)
.+..+++ ..+|.||++.++ .+++||||||+|+||.+||++||+++ . ++|+.|..
T Consensus 338 f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~ 417 (559)
T PLN02523 338 FENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFH 417 (559)
T ss_pred ccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHH
Confidence 0111233 357899999996 56999999999999999999999986 2 44555531
Q ss_pred -------C--C---CCCCc-------eEEEEeCChHHHHHHHHHHH---h-cCCCCcCccccccccccCCCCC---cccC
Q psy7288 131 -------W--P---DCFNS-------GVFVFKPSESTYNALVEFAL---V-NGSFDDATRQLQKPLNMRNLPK---SFFQ 184 (518)
Q Consensus 131 -------w--p---~~FNS-------GVmVi~Ps~~~~~~Ll~~~~---~-~~s~d~~DQdl~~pL~mr~lpN---~~F~ 184 (518)
+ | .|||+ |||||+...|+.+++.+.+. + +......|||. | | ..|.
T Consensus 418 r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~Dqda---L------pp~LivF~ 488 (559)
T PLN02523 418 RYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGT---L------PPGLITFY 488 (559)
T ss_pred HHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccc---c------chHHHHhc
Confidence 1 1 36776 99999999999887766553 1 23455789999 7 5 6777
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCcccccccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhh
Q psy7288 185 PPSTGSRSPSVSSISHSRENSADSAFGTSTITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSY 261 (518)
Q Consensus 185 ~~~~~di~p~~~~i~~Lr~~s~p~~YN~~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WW 261 (518)
+.. +.| +.+||..... |.+ ....+++.||||.|..|||..... ..+.+.||
T Consensus 489 gri-----------~~L-----D~rWNvlglG-y~~~i~~~~i~~paIIHYnG~~KPWle~~i---------~~yr~~W~ 542 (559)
T PLN02523 489 STT-----------KPL-----DKSWHVLGLG-YNPSISMDEIRNAAVIHFNGNMKPWLDIAM---------NQFKPLWT 542 (559)
T ss_pred Cce-----------Eec-----CchhhccCCc-cCCCccccccCCCEEEEECCCCCccccCCC---------CcchHHHH
Confidence 643 567 7788865432 211 233578999999999999976432 35678888
Q ss_pred hhhc
Q psy7288 262 DITT 265 (518)
Q Consensus 262 di~~ 265 (518)
.+..
T Consensus 543 kYl~ 546 (559)
T PLN02523 543 KYVD 546 (559)
T ss_pred HHHc
Confidence 8763
No 13
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.79 E-value=8.8e-19 Score=178.99 Aligned_cols=199 Identities=15% Similarity=0.188 Sum_probs=132.0
Q ss_pred ecChhhHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHhc---CCeEE--EEeeeCCCchh--hhcccCCCchh
Q psy7288 13 ATNDSYALGALVVANSLKRVNT-VHDLAILITPGVTLAMKNELLKV---FNFVK--EVDVFDSRDET--NLRLLSRPDLG 84 (518)
Q Consensus 13 ~tnd~Yl~ga~VL~~SLr~~~s-~~~lvvLvt~~vs~~~r~~L~~~---~~~v~--~V~~l~~~d~~--~l~~~~rp~~~ 84 (518)
++++. +..++++++|+..++. ...++|+....++++.++.|+++ +...+ .+..+..+... ....+.. .
T Consensus 7 ~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~---~ 82 (304)
T cd06430 7 ACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK---P 82 (304)
T ss_pred EcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc---H
Confidence 34444 8999999999988763 33455666555888888877765 33333 33333322211 1111100 2
Q ss_pred hhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCC--C----Ccccc-cCC-----CC-------C----CCCCceEE
Q psy7288 85 ITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDR--E----ELSAA-PDA-----GW-------P----DCFNSGVF 140 (518)
Q Consensus 85 ~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~--~----elaAa-pD~-----gw-------p----~~FNSGVm 140 (518)
.+|.||.+.++ .++|||||||+|+||++||+|||++ + .++|+ ++. +| + .+||||||
T Consensus 83 ~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVm 162 (304)
T cd06430 83 CAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVM 162 (304)
T ss_pred HHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCccccccccccee
Confidence 68999999885 5789999999999999999999986 2 24443 432 23 1 35999999
Q ss_pred EEeCChHHH-----------H----HHHHHHHhc-CCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCC
Q psy7288 141 VFKPSESTY-----------N----ALVEFALVN-GSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSREN 204 (518)
Q Consensus 141 Vi~Ps~~~~-----------~----~Ll~~~~~~-~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~ 204 (518)
+||...++. . .+++++.+. ..+.++|||+ | |..|.+... .+..|
T Consensus 163 LmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDi---L------N~v~~~~p~--------~~~~L--- 222 (304)
T cd06430 163 LMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDL---I------NIIFHHNPE--------MLYVF--- 222 (304)
T ss_pred eeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHH---H------HHHHcCCCC--------eEEEc---
Confidence 999988775 2 345555554 4577999999 9 999987310 12567
Q ss_pred CCCCcccccccc-cccc---cccCCCceEEcccCCCC
Q psy7288 205 SADSAFGTSTIT-STSS---SVSGGGLQIAHPRAHSS 237 (518)
Q Consensus 205 s~p~~YN~~~~~-~y~y---~~~~~~~kIiHf~g~~K 237 (518)
|.+||++... .|.. .....+++|||..+..+
T Consensus 223 --p~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~ 257 (304)
T cd06430 223 --PCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRGVY 257 (304)
T ss_pred --CccccCCccceeecccccccccccceEEEcCCCCC
Confidence 9999977633 2221 12246899999986555
No 14
>PLN02718 Probable galacturonosyltransferase
Probab=99.79 E-value=5.8e-19 Score=191.64 Aligned_cols=199 Identities=14% Similarity=0.108 Sum_probs=133.5
Q ss_pred cChhhHHHHHHHHHHHHhh--CCCCeEEE-EECCCCCHHHHHHHHhcCC---eEEEEeeeCCCchhh--------hccc-
Q psy7288 14 TNDSYALGALVVANSLKRV--NTVHDLAI-LITPGVTLAMKNELLKVFN---FVKEVDVFDSRDETN--------LRLL- 78 (518)
Q Consensus 14 tnd~Yl~ga~VL~~SLr~~--~s~~~lvv-Lvt~~vs~~~r~~L~~~~~---~v~~V~~l~~~d~~~--------l~~~- 78 (518)
.+|+|+ ++.|++.|+..| ++. .+++ +++++++...+..+..... ..+.|..++ +... +..+
T Consensus 319 ~sDNvl-aasVvInSil~Ns~np~-~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Id--df~~lp~~~~~~lk~l~ 394 (603)
T PLN02718 319 FSDNVL-ACSVVVNSTISSSKEPE-KIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNID--DMNVLPADYNSLLMKQN 394 (603)
T ss_pred EcCCce-eEEEEhhhhhhccCCCC-cEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecc--hhccccccchhhhhhcc
Confidence 345574 899999999987 333 4443 5578999888776654422 122232222 1111 1100
Q ss_pred -CCCch--hhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC---C-cccccCCC--------------C-----
Q psy7288 79 -SRPDL--GITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE---E-LSAAPDAG--------------W----- 131 (518)
Q Consensus 79 -~rp~~--~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~---e-laAapD~g--------------w----- 131 (518)
.++++ ..+|.||++..+ .+++||||||+|+||.+||.+||+++ . ++|+.|.+ +
T Consensus 395 s~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i 474 (603)
T PLN02718 395 SHDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWV 474 (603)
T ss_pred ccccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhh
Confidence 12222 468999999986 46999999999999999999999986 2 34444421 1
Q ss_pred -------CCCCCceEEEEeCChHHHHHHHH----HHHhcCCCCcCccccccccccCCCCC---cccCCCCCCCCCCCCCc
Q psy7288 132 -------PDCFNSGVFVFKPSESTYNALVE----FALVNGSFDDATRQLQKPLNMRNLPK---SFFQPPSTGSRSPSVSS 197 (518)
Q Consensus 132 -------p~~FNSGVmVi~Ps~~~~~~Ll~----~~~~~~s~d~~DQdl~~pL~mr~lpN---~~F~~~~~~di~p~~~~ 197 (518)
..|||+|||||++..|+.+++.+ ++..+......|||. | | ..|.+..
T Consensus 475 ~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqda---L------pp~LlvF~gri---------- 535 (603)
T PLN02718 475 AKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGS---L------PIGWLTFYNQT---------- 535 (603)
T ss_pred hcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCccc---c------cHHHHHhcCce----------
Confidence 13588999999999998766554 444443335678999 7 6 7787743
Q ss_pred cccCCCCCCCCcccccccccccc---cccCCCceEEcccCCCCCCCcc
Q psy7288 198 ISHSRENSADSAFGTSTITSTSS---SVSGGGLQIAHPRAHSSPASLQ 242 (518)
Q Consensus 198 i~~Lr~~s~p~~YN~~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~ 242 (518)
+.| +.+||....+ |.+ .....++.||||.|+.|||...
T Consensus 536 -~~L-----D~rWNv~gLG-~~~~i~~~~i~~aaIIHYnG~~KPWle~ 576 (603)
T PLN02718 536 -VAL-----DKRWHVLGLG-HESGVGASDIEQAAVIHYDGVMKPWLDI 576 (603)
T ss_pred -eec-----ChHHhccCcc-ccccccccccCCCEEEEECCCCCccccC
Confidence 577 8888876533 222 2235788999999999999875
No 15
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1.7e-19 Score=180.42 Aligned_cols=211 Identities=23% Similarity=0.212 Sum_probs=138.9
Q ss_pred CCCEEEEEEecChhhHHH-HHHHHHHHHhhCC-CCeE-EEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchh---hhcc
Q psy7288 4 VTGTAWVTLATNDSYALG-ALVVANSLKRVNT-VHDL-AILITPGVTLAMKNELLKVFNFVKEVDVFDSRDET---NLRL 77 (518)
Q Consensus 4 ~~~~A~VTl~tnd~Yl~g-a~VL~~SLr~~~s-~~~l-vvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~---~l~~ 77 (518)
.+++|+++.+++.+|.+. ..++.+-|+.++. +..+ ++|...++.+-..+.|...+..+..|+.++..+.. +-..
T Consensus 68 ng~~al~n~~t~~d~y~N~Tr~lv~~Lk~~~etkaKlV~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di~ 147 (368)
T COG5597 68 NGDYALGNRATLRDIYLNRTRALVVVLKTGGETKAKLVEVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDIK 147 (368)
T ss_pred cCcccccchhhhhceeecccceehhhhhhcCcchhheeeehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhccC
Confidence 456777777776555554 6777777777654 3345 34555677776666666655555445544432211 1111
Q ss_pred cCCCchhhhhHhHhhhhccCcCeEEEecCCeEEcCCChhhhCCC--CcccccCCC-------------------------
Q psy7288 78 LSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE--ELSAAPDAG------------------------- 130 (518)
Q Consensus 78 ~~rp~~~~tftKL~~w~L~eydKVVYLDaD~LVl~nIDeLF~~~--elaAapD~g------------------------- 130 (518)
+...++...|+||++|+++|||||||||+|.||++|||+||+++ +++|++|..
T Consensus 148 ~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg 227 (368)
T COG5597 148 PDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYG 227 (368)
T ss_pred cCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhc
Confidence 22345678999999999999999999999999999999999976 565555410
Q ss_pred ---------------------------CCCCCCceEEEEeCChHHHHHHHHHHHhcCCCC---cCccccccccccCCCCC
Q psy7288 131 ---------------------------WPDCFNSGVFVFKPSESTYNALVEFALVNGSFD---DATRQLQKPLNMRNLPK 180 (518)
Q Consensus 131 ---------------------------wp~~FNSGVmVi~Ps~~~~~~Ll~~~~~~~s~d---~~DQdl~~pL~mr~lpN 180 (518)
|..+||+|+||++|+...+.+++.++.- .-|| ...|.+ | |
T Consensus 228 ~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alP-klydda~mmeqsl---l------n 297 (368)
T COG5597 228 KMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALP-KLYDDADMMEQSL---L------N 297 (368)
T ss_pred ccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhH-HhhhhhhHHHHHH---H------H
Confidence 1157999999999999999999988732 2233 446899 9 8
Q ss_pred cccCCCCCCCCCCCCCccccCCCCCCCCcccccccccccccccCCCceEEcccCCCCCCCcccc
Q psy7288 181 SFFQPPSTGSRSPSVSSISHSRENSADSAFGTSTITSTSSSVSGGGLQIAHPRAHSSPASLQQT 244 (518)
Q Consensus 181 ~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~~~~~y~y~~~~~~~kIiHf~g~~KPW~~~~~ 244 (518)
..|+... -..|.|+++.||.-... .....-++.+| .|||...+.
T Consensus 298 laYn~~g------------~FPwerld~~yNG~wa~----~ndlPylka~H----gK~W~y~g~ 341 (368)
T COG5597 298 LAYNYEG------------FFPWERLDPRYNGYWAD----ANDLPYLKAWH----GKPWFYTGE 341 (368)
T ss_pred HHHhhhc------------cCchhhcCccccccccc----ccccchHHHhh----cCcCCCCcc
Confidence 8876421 11344459999932211 11112345566 499998654
No 16
>PLN02769 Probable galacturonosyltransferase
Probab=99.73 E-value=7.7e-18 Score=183.67 Aligned_cols=146 Identities=16% Similarity=0.072 Sum_probs=105.6
Q ss_pred hhhHhHhhhhcc-CcCeEEEecCCeEEcCCChhhhCCC----CcccccCCC--------------C---CCCCCceEEEE
Q psy7288 85 ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG--------------W---PDCFNSGVFVF 142 (518)
Q Consensus 85 ~tftKL~~w~L~-eydKVVYLDaD~LVl~nIDeLF~~~----elaAapD~g--------------w---p~~FNSGVmVi 142 (518)
.+|.||++.++. +++||||||+|+||.+||.+||++| -++|+.|.+ + ..|||+|||||
T Consensus 438 ~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~CyFNSGVLLI 517 (629)
T PLN02769 438 FSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNVI 517 (629)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCccccccccCeeEe
Confidence 578899998864 5899999999999999999999986 255665421 1 13689999999
Q ss_pred eCChHHHHHHHHHHH----hc-----CCCCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCccccc
Q psy7288 143 KPSESTYNALVEFAL----VN-----GSFDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTS 213 (518)
Q Consensus 143 ~Ps~~~~~~Ll~~~~----~~-----~s~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~ 213 (518)
+...|+.+++.+.+. .. ..++.++|+. | |..|.+.. +.| +.+||+.
T Consensus 518 NL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~---l------nlvF~g~v-----------~~L-----D~rWNv~ 572 (629)
T PLN02769 518 DLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPA---S------LLTFQDLI-----------YPL-----DDRWVLS 572 (629)
T ss_pred eHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCH---H------HHHhcCeE-----------EEC-----CHHHccc
Confidence 999988765544322 21 1234456666 7 77888753 677 8889876
Q ss_pred ccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhhc
Q psy7288 214 TITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDITT 265 (518)
Q Consensus 214 ~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~~ 265 (518)
..+ |.| .....+++||||.|+.|||..... ..+++.||.++.
T Consensus 573 gLG-~~~~i~~~~i~~paIIHYnG~~KPW~e~~i---------~~yr~~W~kYl~ 617 (629)
T PLN02769 573 GLG-HDYGIDEQAIKKAAVLHYNGNMKPWLELGI---------PKYKKYWKRFLN 617 (629)
T ss_pred ccc-ccccccccccCCcEEEEECCCCCCccCCCC---------ChHHHHHHHHhc
Confidence 422 222 234578999999999999987532 357889999874
No 17
>PLN02867 Probable galacturonosyltransferase
Probab=99.68 E-value=5.1e-17 Score=174.85 Aligned_cols=151 Identities=16% Similarity=0.157 Sum_probs=109.5
Q ss_pred CCCch--hhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC----CcccccCC--------C--C----------
Q psy7288 79 SRPDL--GITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDA--------G--W---------- 131 (518)
Q Consensus 79 ~rp~~--~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~----elaAapD~--------g--w---------- 131 (518)
.+|++ ..+|.||++.++ .+++||||||+|+||.+||++||++| .++|+.|. + +
T Consensus 323 ~~pkylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~ 402 (535)
T PLN02867 323 LSPSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPL 402 (535)
T ss_pred cChhhhhHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchh
Confidence 34544 358999999996 47999999999999999999999986 25676542 0 0
Q ss_pred --------CCCCCceEEEEeCChHHHHHHHHHH----HhcC--CCCcCccccccccccCCCCCc---ccCCCCCCCCCCC
Q psy7288 132 --------PDCFNSGVFVFKPSESTYNALVEFA----LVNG--SFDDATRQLQKPLNMRNLPKS---FFQPPSTGSRSPS 194 (518)
Q Consensus 132 --------p~~FNSGVmVi~Ps~~~~~~Ll~~~----~~~~--s~d~~DQdl~~pL~mr~lpN~---~F~~~~~~di~p~ 194 (518)
..|||+||||||...|+.+++.+.+ ..+. .+...|||. | |. .|.+..
T Consensus 403 i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~---L------N~~LlvF~g~v------- 466 (535)
T PLN02867 403 ISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGA---L------PPALLAFKGHV------- 466 (535)
T ss_pred hhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccc---c------chHHHHhcCcE-------
Confidence 1368899999999999887776553 3332 255789999 9 85 676642
Q ss_pred CCccccCCCCCCCCcccccccccccc----cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhh
Q psy7288 195 VSSISHSRENSADSAFGTSTITSTSS----SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDIT 264 (518)
Q Consensus 195 ~~~i~~Lr~~s~p~~YN~~~~~~y~y----~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~ 264 (518)
..| +.+||+.. ..|.+ ....++++||||.|+.|||+.... ..++..|..+.
T Consensus 467 ----~~L-----D~rWNv~g-Lgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~---------~~yR~~W~kyl 521 (535)
T PLN02867 467 ----HPI-----DPSWHVAG-LGSRPPEVPREILESAAVLHFSGPAKPWLEIGF---------PEVRSLWYRHV 521 (535)
T ss_pred ----EEC-----ChhhcccC-CCcccccchhhhcCCcEEEEECCCCCcccccCC---------CchhHHHHHhc
Confidence 677 88999843 23322 223578999999999999987642 35677775443
No 18
>PLN02742 Probable galacturonosyltransferase
Probab=99.67 E-value=4.3e-16 Score=167.51 Aligned_cols=147 Identities=14% Similarity=0.056 Sum_probs=107.1
Q ss_pred hhhhHhHhhhhcc-CcCeEEEecCCeEEcCCChhhhCCC----CcccccCCC-----------C----------C--CCC
Q psy7288 84 GITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG-----------W----------P--DCF 135 (518)
Q Consensus 84 ~~tftKL~~w~L~-eydKVVYLDaD~LVl~nIDeLF~~~----elaAapD~g-----------w----------p--~~F 135 (518)
..+|.||++.++. +++||||||+|+||.+||++||+++ .++|+.|.+ | + .+|
T Consensus 338 ~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~f 417 (534)
T PLN02742 338 MLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGW 417 (534)
T ss_pred HHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCCcccc
Confidence 3588999999864 6899999999999999999999986 255555531 1 1 469
Q ss_pred CceEEEEeCChHHHHHHHHHH---Hh-cCCCCcCccccccccccCCCCCcc---cCCCCCCCCCCCCCccccCCCCCCCC
Q psy7288 136 NSGVFVFKPSESTYNALVEFA---LV-NGSFDDATRQLQKPLNMRNLPKSF---FQPPSTGSRSPSVSSISHSRENSADS 208 (518)
Q Consensus 136 NSGVmVi~Ps~~~~~~Ll~~~---~~-~~s~d~~DQdl~~pL~mr~lpN~~---F~~~~~~di~p~~~~i~~Lr~~s~p~ 208 (518)
|+|||||++..|+.+++.+.+ .+ +......|||. | |-+ |.+.. +.| +.
T Consensus 418 NsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~ga---L------pp~LLaF~g~~-----------~~L-----D~ 472 (534)
T PLN02742 418 AFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGT---L------PPGLLTFYGLT-----------EPL-----DR 472 (534)
T ss_pred ccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccc---c------chHHHHHcCcc-----------eec-----Ch
Confidence 999999999999877665533 33 34445778999 8 753 76643 567 88
Q ss_pred cccccccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhhc
Q psy7288 209 AFGTSTITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDITT 265 (518)
Q Consensus 209 ~YN~~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~~ 265 (518)
.||....+ |.+ ....+++.||||.|+.|||..... ..+...|+.+..
T Consensus 473 rWNv~gLG-~~~~v~~~~i~~aaILHynG~~KPWl~~~i---------~~yr~~W~kYl~ 522 (534)
T PLN02742 473 RWHVLGLG-YDTNIDPRLIESAAVLHFNGNMKPWLKLAI---------ERYKPLWERYVN 522 (534)
T ss_pred hheecccc-cccccchhhccCCeEEEECCCCCcccccCC---------cccchHHHHHHc
Confidence 88875432 211 235678999999999999987632 246667887763
No 19
>PLN02659 Probable galacturonosyltransferase
Probab=99.67 E-value=1e-16 Score=171.95 Aligned_cols=150 Identities=15% Similarity=0.158 Sum_probs=107.3
Q ss_pred CCch--hhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC---C-cccccCCC----------------C-----
Q psy7288 80 RPDL--GITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE---E-LSAAPDAG----------------W----- 131 (518)
Q Consensus 80 rp~~--~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~---e-laAapD~g----------------w----- 131 (518)
+|++ ..+|.||.+.++ .+++||||||+|+||.+||++||++| . ++|+.|.+ +
T Consensus 323 ~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i 402 (534)
T PLN02659 323 SPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLI 402 (534)
T ss_pred CccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhh
Confidence 4544 358889999886 47999999999999999999999986 2 45555521 1
Q ss_pred -------CCCCCceEEEEeCChHHHHHHHH----HHHhc--CCCCcCccccccccccCCCCC---cccCCCCCCCCCCCC
Q psy7288 132 -------PDCFNSGVFVFKPSESTYNALVE----FALVN--GSFDDATRQLQKPLNMRNLPK---SFFQPPSTGSRSPSV 195 (518)
Q Consensus 132 -------p~~FNSGVmVi~Ps~~~~~~Ll~----~~~~~--~s~d~~DQdl~~pL~mr~lpN---~~F~~~~~~di~p~~ 195 (518)
..|||+|||+||...|+.+++.+ ++.++ ..+...|||+ | | ..|.+..
T Consensus 403 ~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQda---L------p~~LivF~g~v-------- 465 (534)
T PLN02659 403 AKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGT---L------PPGLIAFHGHV-------- 465 (534)
T ss_pred hhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhccccccccccccc---c------hHHHHHhcCCE--------
Confidence 03788899999999998666544 44443 2355679999 7 5 6687753
Q ss_pred CccccCCCCCCCCcccccccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhh
Q psy7288 196 SSISHSRENSADSAFGTSTITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDIT 264 (518)
Q Consensus 196 ~~i~~Lr~~s~p~~YN~~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~ 264 (518)
+.| +.+||+... .|.+ ....+++.||||.|..|||+.... ..++..|-.+.
T Consensus 466 ---~~L-----D~rWN~~gL-g~~~~~~~~~i~~paIIHYnG~~KPW~~~~~---------~~yr~~W~kYl 519 (534)
T PLN02659 466 ---HVI-----DPFWHMLGL-GYQENTSLADAESAGVVHFNGRAKPWLDIAF---------PQLRPLWAKYI 519 (534)
T ss_pred ---EEC-----ChhheecCC-cccccccccccCCcEEEEECCCCCccccccC---------CcchhHHHHHh
Confidence 677 888987542 2322 123578999999999999998642 35566666655
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.66 E-value=1.6e-16 Score=172.51 Aligned_cols=145 Identities=13% Similarity=0.112 Sum_probs=104.1
Q ss_pred hhhHhHhhhhcc-CcCeEEEecCCeEEcCCChhhhCCC---C-cccccCCC-----------C------------CCCCC
Q psy7288 85 ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE---E-LSAAPDAG-----------W------------PDCFN 136 (518)
Q Consensus 85 ~tftKL~~w~L~-eydKVVYLDaD~LVl~nIDeLF~~~---e-laAapD~g-----------w------------p~~FN 136 (518)
.+|.||++.++. +++||||||+|+||.+||++||+++ . ++|+.|.+ | ..|||
T Consensus 443 lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFN 522 (639)
T PLN02829 443 LNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWA 522 (639)
T ss_pred HHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCccccee
Confidence 578999998864 5899999999999999999999986 2 44554421 1 14789
Q ss_pred ceEEEEeCChHHHHHHHHHH----HhcCCCCcCccccccccccCCCCCcc---cCCCCCCCCCCCCCccccCCCCCCCCc
Q psy7288 137 SGVFVFKPSESTYNALVEFA----LVNGSFDDATRQLQKPLNMRNLPKSF---FQPPSTGSRSPSVSSISHSRENSADSA 209 (518)
Q Consensus 137 SGVmVi~Ps~~~~~~Ll~~~----~~~~s~d~~DQdl~~pL~mr~lpN~~---F~~~~~~di~p~~~~i~~Lr~~s~p~~ 209 (518)
+|||||+...|+.+++.+.+ ..+..-...|||. | |-+ |.+.. +.| +.+
T Consensus 523 SGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlga---L------Pp~Ll~F~g~i-----------~~L-----D~r 577 (639)
T PLN02829 523 YGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGT---L------PPGLITFWKRT-----------YPL-----DRS 577 (639)
T ss_pred cceEEEeHHHHHHhChHHHHHHHHHHccCCccccccC---C------ChHHHHhcCce-----------Eec-----Chh
Confidence 99999999999877765443 2332223578999 8 764 45532 567 888
Q ss_pred ccccccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhh
Q psy7288 210 FGTSTITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDIT 264 (518)
Q Consensus 210 YN~~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~ 264 (518)
||+...+ |.+ ....+++.||||.|+.|||..... ..++..|..+.
T Consensus 578 WNv~GLG-y~~~v~~~~i~~aaIIHynG~~KPWle~~i---------~~yr~lW~kYl 625 (639)
T PLN02829 578 WHVLGLG-YNPNVNQRDIERAAVIHYNGNMKPWLEIGI---------PKYRNYWSKYV 625 (639)
T ss_pred heecCCC-CCcccchhcccCCeEEEECCCCCccccCCc---------ccchHHHHHHH
Confidence 8887543 222 335678899999999999987532 34666666654
No 21
>PLN02870 Probable galacturonosyltransferase
Probab=99.64 E-value=1.4e-16 Score=170.86 Aligned_cols=149 Identities=17% Similarity=0.135 Sum_probs=105.6
Q ss_pred CCch--hhhhHhHhhhhc-cCcCeEEEecCCeEEcCCChhhhCCC---C-cccccCCC----------CC----------
Q psy7288 80 RPDL--GITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE---E-LSAAPDAG----------WP---------- 132 (518)
Q Consensus 80 rp~~--~~tftKL~~w~L-~eydKVVYLDaD~LVl~nIDeLF~~~---e-laAapD~g----------wp---------- 132 (518)
+|++ ..+|.||++.++ .+++||||||+|+||.+||.+||++| . ++|+.|.+ ..
T Consensus 322 ~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i 401 (533)
T PLN02870 322 SPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLI 401 (533)
T ss_pred CccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchh
Confidence 4444 357889999886 46999999999999999999999986 2 45555521 01
Q ss_pred --------CCCCceEEEEeCChHHHHHHHHH----HHhc--CCCCcCccccccccccCCCCC---cccCCCCCCCCCCCC
Q psy7288 133 --------DCFNSGVFVFKPSESTYNALVEF----ALVN--GSFDDATRQLQKPLNMRNLPK---SFFQPPSTGSRSPSV 195 (518)
Q Consensus 133 --------~~FNSGVmVi~Ps~~~~~~Ll~~----~~~~--~s~d~~DQdl~~pL~mr~lpN---~~F~~~~~~di~p~~ 195 (518)
.|||+||||||...|+.+++.+. +.++ ..+...|||. | | ..|.+..
T Consensus 402 ~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQda---L------p~~livf~g~v-------- 464 (533)
T PLN02870 402 AKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGT---L------PPALIAFKGHV-------- 464 (533)
T ss_pred hcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceeccccc---c------cHhHHHhcCce--------
Confidence 25669999999999887666544 4333 2456889999 7 5 5676643
Q ss_pred CccccCCCCCCCCcccccccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhh
Q psy7288 196 SSISHSRENSADSAFGTSTITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDIT 264 (518)
Q Consensus 196 ~~i~~Lr~~s~p~~YN~~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~ 264 (518)
+.| +.+||+... .|.. ....++++||||.|..|||+... .+.++.+|..|
T Consensus 465 ---~~L-----D~rWN~~gL-gy~~~~~~~~i~~aaIIHY~G~~KPW~~~~----------~~~yr~~W~kY 517 (533)
T PLN02870 465 ---HPI-----DPSWHMLGL-GYQSKTNIESVKKAAVIHYNGQSKPWLEIG----------FEHLRPFWTKY 517 (533)
T ss_pred ---EEC-----ChHHhcCCC-CCcccccccccCCcEEEEECCCCCCccccC----------ccchhHHHHHH
Confidence 577 888997542 2322 22367899999999999998643 13355666666
No 22
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.60 E-value=1.6e-15 Score=164.61 Aligned_cols=145 Identities=12% Similarity=0.064 Sum_probs=103.2
Q ss_pred hhhHhHhhhhcc-CcCeEEEecCCeEEcCCChhhhCCC---C-cccccCCC-----------C------------CCCCC
Q psy7288 85 ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE---E-LSAAPDAG-----------W------------PDCFN 136 (518)
Q Consensus 85 ~tftKL~~w~L~-eydKVVYLDaD~LVl~nIDeLF~~~---e-laAapD~g-----------w------------p~~FN 136 (518)
.+|.||++..+. +++||||||+|+||.+||.+||+++ . ++|+.|.+ | ..|||
T Consensus 461 lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyfN 540 (657)
T PLN02910 461 LNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWA 540 (657)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCCCCceee
Confidence 578899998864 5899999999999999999999986 2 33444321 1 13456
Q ss_pred ceEEEEeCChHHHHHHHH---HHHh-cCCCCcCccccccccccCCCCC---cccCCCCCCCCCCCCCccccCCCCCCCCc
Q psy7288 137 SGVFVFKPSESTYNALVE---FALV-NGSFDDATRQLQKPLNMRNLPK---SFFQPPSTGSRSPSVSSISHSRENSADSA 209 (518)
Q Consensus 137 SGVmVi~Ps~~~~~~Ll~---~~~~-~~s~d~~DQdl~~pL~mr~lpN---~~F~~~~~~di~p~~~~i~~Lr~~s~p~~ 209 (518)
+|||||+...|+.+++.+ ++.+ +......|||. | | ..|.+.. ..| +.+
T Consensus 541 sGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgs---L------PpgLLvF~g~i-----------~pL-----D~r 595 (657)
T PLN02910 541 FGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGS---L------PPGLITFYNLT-----------YPL-----DRS 595 (657)
T ss_pred cccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCC---C------ChHHHHHhCce-----------eec-----Cch
Confidence 699999999998766654 3433 34566789999 9 8 4565542 567 888
Q ss_pred ccccccccccc---cccCCCceEEcccCCCCCCCccccchhhhhhhhhHHHhhhhhhh
Q psy7288 210 FGTSTITSTSS---SVSGGGLQIAHPRAHSSPASLQQTYASAQQQHQQHLKQRSYDIT 264 (518)
Q Consensus 210 YN~~~~~~y~y---~~~~~~~kIiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~WWdi~ 264 (518)
||....+ |.. ....+++.||||.|+.|||..... ..++..|-.++
T Consensus 596 WNv~GLG-yd~~v~~~~i~~AAVLHynG~~KPWl~l~i---------~~Yr~~W~kYl 643 (657)
T PLN02910 596 WHVLGLG-YDPALNQTEIENAAVVHYNGNYKPWLDLAI---------AKYKPYWSRYV 643 (657)
T ss_pred heecCCC-CCcccccccccCcEEEEeCCCCCcccccCc---------ccchHHHHHHc
Confidence 8887533 222 335678999999999999987532 24555555544
No 23
>KOG1950|consensus
Probab=99.36 E-value=2.1e-13 Score=143.85 Aligned_cols=207 Identities=22% Similarity=0.238 Sum_probs=141.3
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeEEcCCChhhhC-CCCcccccCCCCCCCCCceEEEEeCChHHHHHHHHHHHhcCC
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFD-REELSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFALVNGS 161 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~LVl~nIDeLF~-~~elaAapD~gwp~~FNSGVmVi~Ps~~~~~~Ll~~~~~~~s 161 (518)
.+..+.|+++|.+..+++.+.+|+|..++.+.+.+|. ...+++.+- .+..||+|.||+.|+...|++++++......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~--l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~ 226 (369)
T KOG1950|consen 149 NELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNI--LPLIFNSGLLVFEPSLCNYKDLMEFSEEFES 226 (369)
T ss_pred chhcccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCC--ccceeccCccccCCCccchhhHHHhhcccCC
Confidence 3567889999999999999999999999999999999 778877653 2356999999999999999998888888888
Q ss_pred CCcCccccccccccCCCCCcccCCCCCCCCCCCCCccccCCCCCCCCcccccccccccc-------cccCCCceEEcccC
Q psy7288 162 FDDATRQLQKPLNMRNLPKSFFQPPSTGSRSPSVSSISHSRENSADSAFGTSTITSTSS-------SVSGGGLQIAHPRA 234 (518)
Q Consensus 162 ~d~~DQdl~~pL~mr~lpN~~F~~~~~~di~p~~~~i~~Lr~~s~p~~YN~~~~~~y~y-------~~~~~~~kIiHf~g 234 (518)
+.|+|||+ | |.+|..+. .+. +..||........+ ..-.-....+||.|
T Consensus 227 ~~~~~q~~---l------~~~f~~~~-----------~~~-----~~~~n~~~~~~~~~p~~~~l~~~~~~~~~~~~y~~ 281 (369)
T KOG1950|consen 227 YNGADQGF---L------HLIFSWIP-----------DRP-----PPSVNLNLAKLWRHPKKNDLSRASSVLRYALHYLG 281 (369)
T ss_pred CCCccchh---h------HHHhhccc-----------CCC-----cccccccccccccCccccchhhcccccchhhhccc
Confidence 99999999 9 99999874 122 44455443332211 01122345669999
Q ss_pred CCCCCCccccchhhhh------hhhhHHHhhhhhhhcccccCCCCCCCCccccccccceeeecccchhhHHHhhhHhhhh
Q psy7288 235 HSSPASLQQTYASAQQ------QHQQHLKQRSYDITTVLDELGPLPPGWEQARTAEGQVYYLKGVLFMYTRLQAGLARAL 308 (518)
Q Consensus 235 ~~KPW~~~~~~~~~~~------~~~~~~~~~WWdi~~~l~e~~~l~~gwe~a~t~~g~~y~~~~~~~~~~~~~~~~a~~~ 308 (518)
..|||.....+..... ..-...+..||++|+..+..-. -++.. ..
T Consensus 282 ~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~---------------~~~~~--------------~~ 332 (369)
T KOG1950|consen 282 ANKPELCYRDFDCNLDGDEFPRKDIDSLHKKWWDVYDDMSLDLK---------------VHCKL--------------WA 332 (369)
T ss_pred cCCCCccccCcccccccccccchhHHHHHhccchhhccCchhhh---------------hcccc--------------cc
Confidence 7799987665543321 1223456779999965332100 00000 00
Q ss_pred ccccCCCCCCCcccccchhhcccccccCCCCCcCchhhHHHH
Q psy7288 309 AQVPIGTPISAEQLAYEDHIHRQHWEEGHIDYLGKDSWDNIW 350 (518)
Q Consensus 309 sq~~i~~~~~~~~~~~ee~~rr~~WE~G~iDYmG~dsf~nIq 350 (518)
.+ ....+ ......+..+..||.+++||+++++|..||
T Consensus 333 ~~-~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (369)
T KOG1950|consen 333 KE-STEYP----LVRPQAELAAFPEEHDKIDYKAPRAFKAIQ 369 (369)
T ss_pred cc-ccccc----hhhchhHHhhcccccccccccCchhhhccC
Confidence 01 11101 111233444899999999999999998875
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.32 E-value=2.1e-06 Score=87.31 Aligned_cols=118 Identities=22% Similarity=0.259 Sum_probs=80.7
Q ss_pred EEEEEecChhhHHHHHHHHHHHHhhCCCCeEEEEEC--CCCCHHHHHHHHhcCCeEEEEe--eeCCCchhhhcccCCCch
Q psy7288 8 AWVTLATNDSYALGALVVANSLKRVNTVHDLAILIT--PGVTLAMKNELLKVFNFVKEVD--VFDSRDETNLRLLSRPDL 83 (518)
Q Consensus 8 A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt--~~vs~~~r~~L~~~~~~v~~V~--~l~~~d~~~l~~~~rp~~ 83 (518)
.+|+.+ ++.|+..+..+++.||+.|.+.+|-|++. .+++++.++.|.. ...|..|+ .+-..+..... +.+.
T Consensus 3 GIVi~~-g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~-~q~v~~vd~~~~~~~~~~~~~-~~~~-- 77 (271)
T PF11051_consen 3 GIVITA-GDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLP-DQDVWFVDASCVIDPDYLGKS-FSKK-- 77 (271)
T ss_pred EEEEEe-cCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhh-hhhhheecceEEeeccccccc-cccC--
Confidence 355544 55999999999999999999999988876 6799999988876 11111111 11011110100 0000
Q ss_pred hhhhHhHhhhhccCcCeEEEecCCeEEcCCChhhhCCCCcccccCCCCCCCCCceEEEE
Q psy7288 84 GITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDREELSAAPDAGWPDCFNSGVFVF 142 (518)
Q Consensus 84 ~~tftKL~~w~L~eydKVVYLDaD~LVl~nIDeLF~~~elaAapD~gwp~~FNSGVmVi 142 (518)
.-..|..+.-+..++.|||||+|++.++|++.||+.+ .|-.+|.+.+
T Consensus 78 -~~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~-----------~yk~tG~lfw 124 (271)
T PF11051_consen 78 -GFQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE-----------EYKKTGALFW 124 (271)
T ss_pred -CchhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc-----------cccccCEEEE
Confidence 2345665555788999999999999999999999965 4566777777
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.35 E-value=0.001 Score=64.50 Aligned_cols=130 Identities=16% Similarity=0.131 Sum_probs=77.6
Q ss_pred CHHHHHHHHhcCCeEEEEeeeCCCchhhhcccC-CCchhhhhHhHhhhh--ccCcCeEEEecCCeEEcCCChhhhCCC--
Q psy7288 47 TLAMKNELLKVFNFVKEVDVFDSRDETNLRLLS-RPDLGITFTKIHAWR--LTQYSKCVFLDADVLIVQNCDELFDRE-- 121 (518)
Q Consensus 47 s~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~-rp~~~~tftKL~~w~--L~eydKVVYLDaD~LVl~nIDeLF~~~-- 121 (518)
++++.+.|++.+..+..+............... +.+...++.|+.+.. |...-.|+|+|+|++.++|..++|+..
T Consensus 12 D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~~ 91 (212)
T PF03407_consen 12 DEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPDA 91 (212)
T ss_pred CHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCCC
Confidence 467778888887776544433111110101111 112235667766554 334457999999999999999999322
Q ss_pred CcccccCC-------CCCCCCCceEEEEeCChHHHHHH---HHHHHhcCCCCcCccccccccccCCCCCcccCCCC
Q psy7288 122 ELSAAPDA-------GWPDCFNSGVFVFKPSESTYNAL---VEFALVNGSFDDATRQLQKPLNMRNLPKSFFQPPS 187 (518)
Q Consensus 122 elaAapD~-------gwp~~FNSGVmVi~Ps~~~~~~L---l~~~~~~~s~d~~DQdl~~pL~mr~lpN~~F~~~~ 187 (518)
.+....|. +....+|+|+|.++++..+..-+ ++.+.+. -...||.+ | |.++....
T Consensus 92 Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~DQ~~---~------n~~l~~~~ 156 (212)
T PF03407_consen 92 DILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCWDQQA---F------NELLREQA 156 (212)
T ss_pred ceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcchHHH---H------HHHHHhcc
Confidence 23333332 12245799999999998774444 4444333 12359999 9 99887653
No 26
>KOG1879|consensus
Probab=96.53 E-value=0.014 Score=69.12 Aligned_cols=156 Identities=16% Similarity=0.195 Sum_probs=89.1
Q ss_pred EEEEEecChhhHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHH----HhcCCeEEEEeeeCCCchhhhcccCCCc
Q psy7288 8 AWVTLATNDSYALGALVVANSLKRVNT-VHDLAILITPGVTLAMKNEL----LKVFNFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 8 A~VTl~tnd~Yl~ga~VL~~SLr~~~s-~~~lvvLvt~~vs~~~r~~L----~~~~~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
-..+++...-|=.-+.+++.|+.+|.. .-.+++| ..-+|+.-++.+ +.++.+...|.+ ..+..-+-.. .+.|
T Consensus 1183 NIFSvASGHLYERflrIMm~SvlknTktpVKFWfL-kNyLSPtFKe~iP~mA~eYnFeyElv~Y-kWPrWLhqQ~-EKQR 1259 (1470)
T KOG1879|consen 1183 NIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFL-KNYLSPTFKESIPHMAKEYNFEYELVQY-KWPRWLHQQT-EKQR 1259 (1470)
T ss_pred EEEeeccccHHHHHHHHHHHHHHhCCCCceeEEee-hhhcChHHHHHHHHHHHHhCceEEEEEe-cCchhhhhhh-hhhh
Confidence 345678889999999999999998732 2344444 335776555544 345555555553 1221101000 0111
Q ss_pred hhhhhHhHhhhhc--cCcCeEEEecCCeEEcCCChhhhCCCCcccc-----c--C-----CC---C-----------CCC
Q psy7288 83 LGITFTKIHAWRL--TQYSKCVFLDADVLIVQNCDELFDREELSAA-----P--D-----AG---W-----------PDC 134 (518)
Q Consensus 83 ~~~tftKL~~w~L--~eydKVVYLDaD~LVl~nIDeLF~~~elaAa-----p--D-----~g---w-----------p~~ 134 (518)
....|-=|++--| ...+||||+|||.||+.||+||.+.+ |..| | | -| | ..|
T Consensus 1260 iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfd-l~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkY 1338 (1470)
T KOG1879|consen 1260 IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFD-LGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKY 1338 (1470)
T ss_pred hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcc-cCCCccccCccccccccccchhHHhhhHHHHHhccCcc
Confidence 1122222222222 37899999999999999999998876 2222 2 1 12 2 135
Q ss_pred CCceEEEEeCChHHHHHHH--HHHHh--------cCCCCcCcccc
Q psy7288 135 FNSGVFVFKPSESTYNALV--EFALV--------NGSFDDATRQL 169 (518)
Q Consensus 135 FNSGVmVi~Ps~~~~~~Ll--~~~~~--------~~s~d~~DQdl 169 (518)
==|.+.|++ +..|++|- +.++. ..++..-|||+
T Consensus 1339 HISALYVVD--LkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDL 1381 (1470)
T KOG1879|consen 1339 HISALYVVD--LKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDL 1381 (1470)
T ss_pred ccceeeeee--HHHHHhcccchHHHHHHHhhcCCcchhhhccccc
Confidence 557888887 56666552 22221 23555668998
No 27
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=93.38 E-value=0.058 Score=54.09 Aligned_cols=92 Identities=23% Similarity=0.269 Sum_probs=20.4
Q ss_pred hhhhHhHhhhh--c---cCcCeEEEecCCeEEcCCChhhhC-------CCCcc-----ccc-C---------CCC-----
Q psy7288 84 GITFTKIHAWR--L---TQYSKCVFLDADVLIVQNCDELFD-------REELS-----AAP-D---------AGW----- 131 (518)
Q Consensus 84 ~~tftKL~~w~--L---~eydKVVYLDaD~LVl~nIDeLF~-------~~ela-----Aap-D---------~gw----- 131 (518)
..+|.|+.+-+ | .+++=|+|||+|+||.+.=-.|.+ ++.+. -.+ + .+.
T Consensus 58 ~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li 137 (239)
T PF05637_consen 58 PGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLI 137 (239)
T ss_dssp HHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE------------------------------------------------
T ss_pred ChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45788987765 4 567999999999999974333321 11000 000 0 000
Q ss_pred ----CCCCCceEEEEeCChHHHHHHHHHHHh----cCCC---CcCccccccccccCCCCCcccCC
Q psy7288 132 ----PDCFNSGVFVFKPSESTYNALVEFALV----NGSF---DDATRQLQKPLNMRNLPKSFFQP 185 (518)
Q Consensus 132 ----p~~FNSGVmVi~Ps~~~~~~Ll~~~~~----~~s~---d~~DQdl~~pL~mr~lpN~~F~~ 185 (518)
-..+|+|+|+++-+.+... +++.+.. ...+ ..+||+. | -.++..
T Consensus 138 ~t~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsA---l------~~ll~~ 192 (239)
T PF05637_consen 138 ITQDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSA---L------EHLLQW 192 (239)
T ss_dssp -----------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc-ccccccccccccccccccccccccc---c------cccccc
Confidence 1469999999999988864 4454433 1122 2678999 8 666653
No 28
>KOG1928|consensus
Probab=92.00 E-value=0.18 Score=53.63 Aligned_cols=55 Identities=29% Similarity=0.587 Sum_probs=38.0
Q ss_pred EEecCCeEEcCCChhhhCCCCcccccC-CCCCCCCCceEEEEeCChHHHH-HHHHHHHhc
Q psy7288 102 VFLDADVLIVQNCDELFDREELSAAPD-AGWPDCFNSGVFVFKPSESTYN-ALVEFALVN 159 (518)
Q Consensus 102 VYLDaD~LVl~nIDeLF~~~elaAapD-~gwp~~FNSGVmVi~Ps~~~~~-~Ll~~~~~~ 159 (518)
||||.|+||++||..|=+. |+..++ ..| .+.|.+||+|........ .|-++....
T Consensus 242 vYLDTDvIvLksl~~l~N~--ig~~~~~~~~-~~lnnavl~F~k~Hpfl~~cl~eF~~tf 298 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV--IGVDPATQAW-TRLNNAVLIFDKNHPFLLECLREFALTY 298 (409)
T ss_pred EEeeccEEEeccccccccc--ccccchhhHH-HhhcCceeecCCCCHHHHHHHHHHHHhc
Confidence 7999999999999998753 221222 122 679999999998766543 444555543
No 29
>KOG1950|consensus
Probab=90.59 E-value=0.017 Score=61.42 Aligned_cols=36 Identities=31% Similarity=0.463 Sum_probs=33.1
Q ss_pred hhHhHhhhhccCcCeEEEecCCeEEcCCChhhhCCC
Q psy7288 86 TFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE 121 (518)
Q Consensus 86 tftKL~~w~L~eydKVVYLDaD~LVl~nIDeLF~~~ 121 (518)
.+.++.+|.+.++.+.+|+|.|+-+..+++++|+..
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~ 148 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVP 148 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCcccccccc
Confidence 377899999999999999999999999999999875
No 30
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=86.25 E-value=2.5 Score=37.11 Aligned_cols=93 Identities=23% Similarity=0.290 Sum_probs=50.4
Q ss_pred EEEecCh-hhHHHHHHHHHHHHhhCCCCeE-EEEECCCCCHHHHHHHHhcC---CeEEEEeeeCCCchhhhcccCCCchh
Q psy7288 10 VTLATND-SYALGALVVANSLKRVNTVHDL-AILITPGVTLAMKNELLKVF---NFVKEVDVFDSRDETNLRLLSRPDLG 84 (518)
Q Consensus 10 VTl~tnd-~Yl~ga~VL~~SLr~~~s~~~l-vvLvt~~vs~~~r~~L~~~~---~~v~~V~~l~~~d~~~l~~~~rp~~~ 84 (518)
|+.+.|. .|+. -++.||++. +..++ +++++++-+++..+.+++.. ..+..+. ... + .+
T Consensus 3 vip~~n~~~~l~---~~l~sl~~q-~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~---~~~--n--------~g 65 (169)
T PF00535_consen 3 VIPTYNEAEYLE---RTLESLLKQ-TDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIR---NPE--N--------LG 65 (169)
T ss_dssp EEEESS-TTTHH---HHHHHHHHH-SGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEE---HCC--C--------SH
T ss_pred EEEeeCCHHHHH---HHHHHHhhc-cCCCEEEEEecccccccccccccccccccccccccc---ccc--c--------cc
Confidence 4455665 5554 556666666 33333 23445454667777777653 3333222 110 1 12
Q ss_pred hhhHhHhhhhccCcCeEEEecCCeEEcCC-ChhhhC
Q psy7288 85 ITFTKIHAWRLTQYSKCVFLDADVLIVQN-CDELFD 119 (518)
Q Consensus 85 ~tftKL~~w~L~eydKVVYLDaD~LVl~n-IDeLF~ 119 (518)
........++....+-|++||+|.++..+ |.+|++
T Consensus 66 ~~~~~n~~~~~a~~~~i~~ld~D~~~~~~~l~~l~~ 101 (169)
T PF00535_consen 66 FSAARNRGIKHAKGEYILFLDDDDIISPDWLEELVE 101 (169)
T ss_dssp HHHHHHHHHHH--SSEEEEEETTEEE-TTHHHHHHH
T ss_pred ccccccccccccceeEEEEeCCCceEcHHHHHHHHH
Confidence 33345556667778899999999999987 555554
No 31
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=86.00 E-value=3.8 Score=38.13 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=44.6
Q ss_pred CCEEEEEEecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhcCCeE
Q psy7288 5 TGTAWVTLATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKVFNFV 61 (518)
Q Consensus 5 ~~~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~~~~v 61 (518)
....||| +++++++..++-++.|++++.++..++ |++-|+++...+.|+..+..+
T Consensus 60 ~~vvfVS-a~S~~h~~~~~~~i~si~~~~P~~k~i-lY~LgL~~~~i~~L~~~~~n~ 114 (142)
T PF07801_consen 60 SDVVFVS-ATSDNHFNESMKSISSIRKFYPNHKII-LYDLGLSEEQIKKLKKNFCNV 114 (142)
T ss_pred CccEEEE-EecchHHHHHHHHHHHHHHHCCCCcEE-EEeCCCCHHHHHHHHhcCCce
Confidence 4567777 556888899999999999999998876 567899999999998754433
No 32
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=85.04 E-value=11 Score=33.20 Aligned_cols=87 Identities=16% Similarity=0.109 Sum_probs=49.8
Q ss_pred EecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhHhHh
Q psy7288 12 LATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIH 91 (518)
Q Consensus 12 l~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tftKL~ 91 (518)
.+.|. ...+.-++.||.+......-++++.++-.+...+.+++....+ .++.... + .+....+..
T Consensus 4 ~~~~~--~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~~~~~~---~~~~~~~--~--------~g~~~a~n~ 68 (166)
T cd04186 4 VNYNS--LEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFPEV---RLIRNGE--N--------LGFGAGNNQ 68 (166)
T ss_pred EecCC--HHHHHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHHhCCCe---EEEecCC--C--------cChHHHhhH
Confidence 34554 3445667778877643222344555566666777777665422 2222211 1 122233445
Q ss_pred hhhccCcCeEEEecCCeEEcCC
Q psy7288 92 AWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 92 ~w~L~eydKVVYLDaD~LVl~n 113 (518)
+.+..+++-|+|||+|.++..+
T Consensus 69 ~~~~~~~~~i~~~D~D~~~~~~ 90 (166)
T cd04186 69 GIREAKGDYVLLLNPDTVVEPG 90 (166)
T ss_pred HHhhCCCCEEEEECCCcEECcc
Confidence 5555689999999999998765
No 33
>PHA03247 large tegument protein UL36; Provisional
Probab=82.69 E-value=52 Score=43.32 Aligned_cols=10 Identities=30% Similarity=0.631 Sum_probs=5.1
Q ss_pred hhcccccccC
Q psy7288 327 HIHRQHWEEG 336 (518)
Q Consensus 327 ~~rr~~WE~G 336 (518)
+.+...|-.|
T Consensus 2530 ~p~~~~w~~g 2539 (3151)
T PHA03247 2530 HPRMLTWIRG 2539 (3151)
T ss_pred Cchhhhhhhh
Confidence 3345566554
No 34
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=82.49 E-value=7 Score=37.40 Aligned_cols=92 Identities=10% Similarity=0.026 Sum_probs=49.1
Q ss_pred EEEEEecChhhHHHHHHHHHHHHhhCC---CCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchh
Q psy7288 8 AWVTLATNDSYALGALVVANSLKRVNT---VHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLG 84 (518)
Q Consensus 8 A~VTl~tnd~Yl~ga~VL~~SLr~~~s---~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~ 84 (518)
+.|..+.|.. ..+.-++.||++... .+.++ +++++-+++..+.++.+......|.++..... +
T Consensus 3 sIiip~~n~~--~~l~~~l~sl~~q~~~~~~~evi-vvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~-----------~ 68 (249)
T cd02525 3 SIIIPVRNEE--KYIEELLESLLNQSYPKDLIEII-VVDGGSTDGTREIVQEYAAKDPRIRLIDNPKR-----------I 68 (249)
T ss_pred EEEEEcCCch--hhHHHHHHHHHhccCCCCccEEE-EEeCCCCccHHHHHHHHHhcCCeEEEEeCCCC-----------C
Confidence 4455556643 334555778876543 33444 45556666666666665433222333322210 1
Q ss_pred hhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 85 ITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 85 ~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
.....-..++...+|-+++||+|.++..+
T Consensus 69 ~~~a~N~g~~~a~~d~v~~lD~D~~~~~~ 97 (249)
T cd02525 69 QSAGLNIGIRNSRGDIIIRVDAHAVYPKD 97 (249)
T ss_pred chHHHHHHHHHhCCCEEEEECCCccCCHH
Confidence 11123334445578999999999987543
No 35
>PHA03247 large tegument protein UL36; Provisional
Probab=82.45 E-value=26 Score=45.83 Aligned_cols=10 Identities=20% Similarity=0.345 Sum_probs=4.3
Q ss_pred HHHhhCCCCe
Q psy7288 28 SLKRVNTVHD 37 (518)
Q Consensus 28 SLr~~~s~~~ 37 (518)
+||+..+..|
T Consensus 1930 tlREA~S~ID 1939 (3151)
T PHA03247 1930 ELREATSELD 1939 (3151)
T ss_pred ehhhhhhhcc
Confidence 4444444433
No 36
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=82.13 E-value=6.4 Score=33.45 Aligned_cols=89 Identities=18% Similarity=0.120 Sum_probs=47.9
Q ss_pred EEecChhhHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHhcCCe---EEEEeeeCCCchhhhcccCCCchhhh
Q psy7288 11 TLATNDSYALGALVVANSLKRVNT-VHDLAILITPGVTLAMKNELLKVFNF---VKEVDVFDSRDETNLRLLSRPDLGIT 86 (518)
Q Consensus 11 Tl~tnd~Yl~ga~VL~~SLr~~~s-~~~lvvLvt~~vs~~~r~~L~~~~~~---v~~V~~l~~~d~~~l~~~~rp~~~~t 86 (518)
.++.|. ...+.-++.||.+.+. .+.++| ++.+-++...+.+.+.... +..+. ... ..+..
T Consensus 3 i~~~~~--~~~l~~~l~s~~~~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------~~g~~ 66 (156)
T cd00761 3 IPAYNE--EPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTLEILEEYAKKDPRVIRVI--NEE-----------NQGLA 66 (156)
T ss_pred EeecCc--HHHHHHHHHHHHhCCccceEEEE-EeCCCCccHHHHHHHHHhcCCCeEEEE--ecC-----------CCChH
Confidence 344454 3445667777777653 344444 4445555566555554332 11111 111 01222
Q ss_pred hHhHhhhhccCcCeEEEecCCeEEcCCCh
Q psy7288 87 FTKIHAWRLTQYSKCVFLDADVLIVQNCD 115 (518)
Q Consensus 87 ftKL~~w~L~eydKVVYLDaD~LVl~nID 115 (518)
..........+++.|+++|+|.++..+.-
T Consensus 67 ~~~~~~~~~~~~d~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 67 AARNAGLKAARGEYILFLDADDLLLPDWL 95 (156)
T ss_pred HHHHHHHHHhcCCEEEEECCCCccCccHH
Confidence 33334444458999999999999877643
No 37
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=78.48 E-value=1.3 Score=44.54 Aligned_cols=54 Identities=20% Similarity=0.458 Sum_probs=36.0
Q ss_pred hhccCcCeEEEecCCeEEcCCChhhhCCCCcccccC-CCCCCCCCceEEEEeCCh
Q psy7288 93 WRLTQYSKCVFLDADVLIVQNCDELFDREELSAAPD-AGWPDCFNSGVFVFKPSE 146 (518)
Q Consensus 93 w~L~eydKVVYLDaD~LVl~nIDeLF~~~elaAapD-~gwp~~FNSGVmVi~Ps~ 146 (518)
..+...+-|||||+|||+.+-+--|+.-|.++.-.| .+-...+--|.++++-|.
T Consensus 206 h~is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 260 (326)
T PRK15382 206 HNISPCEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSN 260 (326)
T ss_pred cccCCCCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCC
Confidence 334457899999999999999998887666653322 111123445777777554
No 38
>PRK15384 type III secretion system protein; Provisional
Probab=78.10 E-value=1.3 Score=44.66 Aligned_cols=54 Identities=17% Similarity=0.447 Sum_probs=35.9
Q ss_pred hhccCcCeEEEecCCeEEcCCChhhhCCCCcccccC-CCCCCCCCceEEEEeCCh
Q psy7288 93 WRLTQYSKCVFLDADVLIVQNCDELFDREELSAAPD-AGWPDCFNSGVFVFKPSE 146 (518)
Q Consensus 93 w~L~eydKVVYLDaD~LVl~nIDeLF~~~elaAapD-~gwp~~FNSGVmVi~Ps~ 146 (518)
..+...+-|||||+|||+.+-+--|+.-|.++.-.| .+-...+--|.++++-|.
T Consensus 211 h~is~~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 265 (336)
T PRK15384 211 YDLSTNSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNN 265 (336)
T ss_pred cccCCCCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 334457889999999999999998887666653322 111123445777777554
No 39
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=77.67 E-value=13 Score=32.47 Aligned_cols=88 Identities=19% Similarity=0.146 Sum_probs=45.4
Q ss_pred ecChhhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHhcCCeE-EEEeeeCCCchhhhcccCCCchhhhhHhH
Q psy7288 13 ATNDSYALGALVVANSLKRVN-TVHDLAILITPGVTLAMKNELLKVFNFV-KEVDVFDSRDETNLRLLSRPDLGITFTKI 90 (518)
Q Consensus 13 ~tnd~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~~r~~L~~~~~~v-~~V~~l~~~d~~~l~~~~rp~~~~tftKL 90 (518)
+.|.. ..+.-++.||++.. ....++ +++++-++...+.+......- ..+.++... .+ .+..-..-
T Consensus 5 ~~n~~--~~l~~~l~sl~~q~~~~~~ii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~--~~--------~g~~~~~n 71 (180)
T cd06423 5 AYNEE--AVIERTIESLLALDYPKLEVI-VVDDGSTDDTLEILEELAALYIRRVLVVRDK--EN--------GGKAGALN 71 (180)
T ss_pred ccChH--HHHHHHHHHHHhCCCCceEEE-EEeCCCccchHHHHHHHhccccceEEEEEec--cc--------CCchHHHH
Confidence 34543 45556668887754 234444 445555555666665543320 001111111 11 11122233
Q ss_pred hhhhccCcCeEEEecCCeEEcCC
Q psy7288 91 HAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 91 ~~w~L~eydKVVYLDaD~LVl~n 113 (518)
..+....++-|++||+|.++..+
T Consensus 72 ~~~~~~~~~~i~~~D~D~~~~~~ 94 (180)
T cd06423 72 AGLRHAKGDIVVVLDADTILEPD 94 (180)
T ss_pred HHHHhcCCCEEEEECCCCCcChH
Confidence 34444588999999999988765
No 40
>PRK15383 type III secretion system protein; Provisional
Probab=77.23 E-value=1.5 Score=44.10 Aligned_cols=53 Identities=21% Similarity=0.401 Sum_probs=35.5
Q ss_pred hccCcCeEEEecCCeEEcCCChhhhCCCCcccccC-CCCCCCCCceEEEEeCCh
Q psy7288 94 RLTQYSKCVFLDADVLIVQNCDELFDREELSAAPD-AGWPDCFNSGVFVFKPSE 146 (518)
Q Consensus 94 ~L~eydKVVYLDaD~LVl~nIDeLF~~~elaAapD-~gwp~~FNSGVmVi~Ps~ 146 (518)
.|...+-|||||+|||+.+-+--|+.-|.++.-.| .+-...+--|.++++-|.
T Consensus 215 ~is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 268 (335)
T PRK15383 215 HLQPGGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSE 268 (335)
T ss_pred ccCCCCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 34457889999999999999998887666653322 111123445777777654
No 41
>PLN03181 glycosyltransferase; Provisional
Probab=77.22 E-value=6.8 Score=42.51 Aligned_cols=69 Identities=17% Similarity=0.339 Sum_probs=43.3
Q ss_pred hhhhhHhHhhhh-----ccCcCeEEEecCCeEEcCCChhh--hCCCCcccccCCCCC---------CCCCceEEEEeCCh
Q psy7288 83 LGITFTKIHAWR-----LTQYSKCVFLDADVLIVQNCDEL--FDREELSAAPDAGWP---------DCFNSGVFVFKPSE 146 (518)
Q Consensus 83 ~~~tftKL~~w~-----L~eydKVVYLDaD~LVl~nIDeL--F~~~elaAapD~gwp---------~~FNSGVmVi~Ps~ 146 (518)
....|.|+-+-+ ..+++-|.|||+|+||++.=-+| -....+- ....||| .-||+|+|+|+-+.
T Consensus 179 ~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp~~sLPl~ry~~~N-Lvvhg~p~~vy~~qdw~GlN~GsFLIRNcq 257 (453)
T PLN03181 179 MNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMDFKLPLHRYRDHN-LVVHGWPKLIYEKRSWTALNAGVFLIRNCQ 257 (453)
T ss_pred CchhhhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhhcCCcc-ccccCCcccccccccccccceeeeEEecCH
Confidence 345788877655 35789999999999999652222 1111111 0113444 34899999999987
Q ss_pred HHHHHH
Q psy7288 147 STYNAL 152 (518)
Q Consensus 147 ~~~~~L 152 (518)
|...-|
T Consensus 258 WSl~LL 263 (453)
T PLN03181 258 WSLDFM 263 (453)
T ss_pred HHHHHH
Confidence 654433
No 42
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=76.99 E-value=12 Score=36.16 Aligned_cols=93 Identities=16% Similarity=0.127 Sum_probs=51.0
Q ss_pred CEEEEEEecChhhHHHHHHHHHHHHhhC-CC--CeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCc
Q psy7288 6 GTAWVTLATNDSYALGALVVANSLKRVN-TV--HDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 6 ~~A~VTl~tnd~Yl~ga~VL~~SLr~~~-s~--~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
+.+.|..+.|+. ..+.-++.||.... +. ..+ |+++++-++...+.++++... .+.++.... +
T Consensus 30 ~isVvip~~n~~--~~l~~~l~si~~q~~~~~~~ei-ivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~--~-------- 94 (251)
T cd06439 30 TVTIIIPAYNEE--AVIEAKLENLLALDYPRDRLEI-IVVSDGSTDGTAEIAREYADK--GVKLLRFPE--R-------- 94 (251)
T ss_pred EEEEEEecCCcH--HHHHHHHHHHHhCcCCCCcEEE-EEEECCCCccHHHHHHHHhhC--cEEEEEcCC--C--------
Confidence 455666666754 33455667776643 23 233 445556666677777665433 122221111 1
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
.+..............|=|++||+|+++..+
T Consensus 95 ~g~~~a~n~gi~~a~~d~i~~lD~D~~~~~~ 125 (251)
T cd06439 95 RGKAAALNRALALATGEIVVFTDANALLDPD 125 (251)
T ss_pred CChHHHHHHHHHHcCCCEEEEEccccCcCHH
Confidence 1222233444445567999999999999754
No 43
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=75.77 E-value=19 Score=32.74 Aligned_cols=93 Identities=15% Similarity=0.048 Sum_probs=49.9
Q ss_pred EEEecChhhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhH
Q psy7288 10 VTLATNDSYALGALVVANSLKRVN-TVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFT 88 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tft 88 (518)
|..+.|.. ..+.-++.||.+.. .... +|+++++-++...+.+++....++.+ +... + .+....
T Consensus 3 vi~~~n~~--~~l~~~l~sl~~q~~~~~e-vivvDd~s~d~~~~~~~~~~~~~~~~--~~~~---~--------~g~~~a 66 (202)
T cd06433 3 ITPTYNQA--ETLEETIDSVLSQTYPNIE-YIVIDGGSTDGTVDIIKKYEDKITYW--ISEP---D--------KGIYDA 66 (202)
T ss_pred EEeccchH--HHHHHHHHHHHhCCCCCce-EEEEeCCCCccHHHHHHHhHhhcEEE--EecC---C--------cCHHHH
Confidence 44455643 34445566776543 2333 34556565566777777655432222 1111 1 122223
Q ss_pred hHhhhhccCcCeEEEecCCeEEcCC-Chhhh
Q psy7288 89 KIHAWRLTQYSKCVFLDADVLIVQN-CDELF 118 (518)
Q Consensus 89 KL~~w~L~eydKVVYLDaD~LVl~n-IDeLF 118 (518)
.-..++....+=|++||+|.++..+ +..+.
T Consensus 67 ~n~~~~~a~~~~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 67 MNKGIALATGDIIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCchHHHHHH
Confidence 3344455678899999999988765 44443
No 44
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=75.54 E-value=23 Score=33.62 Aligned_cols=95 Identities=11% Similarity=-0.051 Sum_probs=50.0
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhC-CC--CeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCch
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVN-TV--HDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDL 83 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~-s~--~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~ 83 (518)
...|..+.|+. .....-++.||.... +. +. +|+++++-++...+.++.+.... .+.++.... +. .
T Consensus 3 vsviip~~n~~-~~~l~~~l~sl~~q~~~~~~~e-iivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~--~~-------~ 70 (234)
T cd06421 3 VDVFIPTYNEP-LEIVRKTLRAALAIDYPHDKLR-VYVLDDGRRPELRALAAELGVEY-GYRYLTRPD--NR-------H 70 (234)
T ss_pred eEEEEecCCCc-HHHHHHHHHHHHhcCCCcccEE-EEEEcCCCchhHHHHHHHhhccc-CceEEEeCC--CC-------C
Confidence 45555667753 112344566776532 22 23 34566676777777777765421 111111111 00 0
Q ss_pred hhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 84 GITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 84 ~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
+.....-.+++...++-|++||+|.++-.+
T Consensus 71 ~~~~~~n~~~~~a~~d~i~~lD~D~~~~~~ 100 (234)
T cd06421 71 AKAGNLNNALAHTTGDFVAILDADHVPTPD 100 (234)
T ss_pred CcHHHHHHHHHhCCCCEEEEEccccCcCcc
Confidence 111122344455689999999999988543
No 45
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=75.10 E-value=15 Score=33.43 Aligned_cols=89 Identities=13% Similarity=0.141 Sum_probs=47.0
Q ss_pred EEEecChhhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHhcCC----eEEEEeeeCCCchhhhcccCCCchh
Q psy7288 10 VTLATNDSYALGALVVANSLKRVN-TVHDLAILITPGVTLAMKNELLKVFN----FVKEVDVFDSRDETNLRLLSRPDLG 84 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~~r~~L~~~~~----~v~~V~~l~~~d~~~l~~~~rp~~~ 84 (518)
|..+.|.. ..+.-++.||.+.. ....++ +++++-++...+.++.... .++. ++.... .++
T Consensus 2 vip~~n~~--~~l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~--~~~~~~----------~~~ 66 (182)
T cd06420 2 IITTYNRP--EALELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKH--VWQEDE----------GFR 66 (182)
T ss_pred EEeecCCh--HHHHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEE--EEcCCc----------chh
Confidence 44455543 23445567776643 344444 4555555555555554322 2221 111110 112
Q ss_pred hhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 85 ITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 85 ~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
.....-..++....+-|++||+|.++..+
T Consensus 67 ~~~~~n~g~~~a~g~~i~~lD~D~~~~~~ 95 (182)
T cd06420 67 KAKIRNKAIAAAKGDYLIFIDGDCIPHPD 95 (182)
T ss_pred HHHHHHHHHHHhcCCEEEEEcCCcccCHH
Confidence 23334455667788999999999988655
No 46
>PF00397 WW: WW domain; InterPro: IPR001202 Synonym(s): Rsp5 or WWP domain The WW domain is a short conserved region in a number of unrelated proteins, which folds as a stable, triple stranded beta-sheet. This short domain of approximately 40 amino acids, may be repeated up to four times in some proteins [, , , ]. The name WW or WWP derives from the presence of two signature tryptophan residues that are spaced 20-23 amino acids apart and are present in most WW domains known to date, as well as that of a conserved Pro. The WW domain binds to proteins with particular proline-motifs, [AP]-P-P-[AP]-Y, and/or phosphoserine- phosphothreonine-containing motifs [, ]. It is frequently associated with other domains typical for proteins in signal transduction processes. A large variety of proteins containing the WW domain are known. These include; dystrophin, a multidomain cytoskeletal protein; utrophin, a dystrophin-like protein of unknown function; vertebrate YAP protein, substrate of an unknown serine kinase; Mus musculus (Mouse) NEDD-4, involved in the embryonic development and differentiation of the central nervous system; Saccharomyces cerevisiae (Baker's yeast) RSP5, similar to NEDD-4 in its molecular organisation; Rattus norvegicus (Rat) FE65, a transcription-factor activator expressed preferentially in liver; Nicotiana tabacum (Common tobacco) DB10 protein, amongst others.; GO: 0005515 protein binding; PDB: 2JXW_A 2DK1_A 2JOC_A 2JO9_A 1YIU_A 1O6W_A 2JMF_A 1TK7_A 2KYK_A 2L5F_A ....
Probab=74.86 E-value=1.7 Score=29.61 Aligned_cols=24 Identities=38% Similarity=0.747 Sum_probs=20.0
Q ss_pred CCCCCccccccc-cceeeecccchh
Q psy7288 273 LPPGWEQARTAE-GQVYYLKGVLFM 296 (518)
Q Consensus 273 l~~gwe~a~t~~-g~~y~~~~~~~~ 296 (518)
||.||+...+.+ |..||.|+.+..
T Consensus 1 LP~gW~~~~~~~~g~~YY~N~~t~~ 25 (31)
T PF00397_consen 1 LPPGWEEYFDPDSGRPYYYNHETGE 25 (31)
T ss_dssp SSTTEEEEEETTTSEEEEEETTTTE
T ss_pred CCcCCEEEEcCCCCCEEEEeCCCCC
Confidence 689999888765 999999987653
No 47
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=73.91 E-value=1.1e+02 Score=34.66 Aligned_cols=14 Identities=14% Similarity=0.278 Sum_probs=7.1
Q ss_pred hhhHHHHHHHHHHH
Q psy7288 16 DSYALGALVVANSL 29 (518)
Q Consensus 16 d~Yl~ga~VL~~SL 29 (518)
+.||.-+.-+.+.+
T Consensus 131 ~~ylaklq~irq~i 144 (943)
T PTZ00449 131 DEYLAKLQEIRQAI 144 (943)
T ss_pred HHHHHHHHHHHHHH
Confidence 55665554444433
No 48
>smart00456 WW Domain with 2 conserved Trp (W) residues. Also known as the WWP or rsp5 domain. Binds proline-rich polypeptides.
Probab=72.63 E-value=2.6 Score=28.39 Aligned_cols=23 Identities=39% Similarity=0.944 Sum_probs=20.1
Q ss_pred CCCCCccccccccceeeecccch
Q psy7288 273 LPPGWEQARTAEGQVYYLKGVLF 295 (518)
Q Consensus 273 l~~gwe~a~t~~g~~y~~~~~~~ 295 (518)
||.||+...+.+|..||.++.++
T Consensus 1 lp~gW~~~~~~~g~~yy~n~~t~ 23 (32)
T smart00456 1 LPPGWEERKDPDGRPYYYNHETK 23 (32)
T ss_pred CCCCCEEEECCCCCEEEEECCCC
Confidence 58899999999999999997655
No 49
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=72.41 E-value=18 Score=33.98 Aligned_cols=25 Identities=24% Similarity=0.161 Sum_probs=18.5
Q ss_pred hHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 89 KIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 89 KL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
..+......++-|++||+|.++..+
T Consensus 74 ~n~g~~~~~~d~i~~~D~D~~~~~~ 98 (229)
T cd04192 74 LTTAIKAAKGDWIVTTDADCVVPSN 98 (229)
T ss_pred HHHHHHHhcCCEEEEECCCcccCHH
Confidence 3444455678999999999988643
No 50
>PRK11204 N-glycosyltransferase; Provisional
Probab=71.37 E-value=14 Score=39.26 Aligned_cols=95 Identities=14% Similarity=0.101 Sum_probs=48.3
Q ss_pred CEEEEEEecChhhHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchh
Q psy7288 6 GTAWVTLATNDSYALGALVVANSLKRV-NTVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLG 84 (518)
Q Consensus 6 ~~A~VTl~tnd~Yl~ga~VL~~SLr~~-~s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~ 84 (518)
+.+.+.-+.|+. ....-++.||.+. .+.+.++ +++++-+++..+.+++.......+.++.... +. +
T Consensus 55 ~vsViIp~yne~--~~i~~~l~sl~~q~yp~~eii-VvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~--n~--------G 121 (420)
T PRK11204 55 GVSILVPCYNEG--ENVEETISHLLALRYPNYEVI-AINDGSSDNTGEILDRLAAQIPRLRVIHLAE--NQ--------G 121 (420)
T ss_pred CEEEEEecCCCH--HHHHHHHHHHHhCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCcEEEEEcCC--CC--------C
Confidence 456666667864 2234455666653 3444444 4555655556655554322111122222111 10 1
Q ss_pred hhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 85 ITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 85 ~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
..-..-...+..++|-|++||+|.++-.+
T Consensus 122 ka~aln~g~~~a~~d~i~~lDaD~~~~~d 150 (420)
T PRK11204 122 KANALNTGAAAARSEYLVCIDGDALLDPD 150 (420)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCChh
Confidence 11112223344689999999999988765
No 51
>PRK10063 putative glycosyl transferase; Provisional
Probab=68.61 E-value=34 Score=34.07 Aligned_cols=93 Identities=15% Similarity=0.170 Sum_probs=49.8
Q ss_pred EEEEEEecCh-hhHHHHHHHHHHHHhh--CCCCeE-EEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCc
Q psy7288 7 TAWVTLATND-SYALGALVVANSLKRV--NTVHDL-AILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 7 ~A~VTl~tnd-~Yl~ga~VL~~SLr~~--~s~~~l-vvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
...|+.+.|. .++. -++.||... .+..++ +|+++++-++.+.+.+++..... .+.++...+.
T Consensus 3 vSVIi~~yN~~~~l~---~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~-~i~~i~~~~~---------- 68 (248)
T PRK10063 3 LSVITVAFRNLEGIV---KTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIF-NLRFVSEPDN---------- 68 (248)
T ss_pred EEEEEEeCCCHHHHH---HHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccC-CEEEEECCCC----------
Confidence 4566666764 4544 444555432 122233 44567677777888888764321 1223322211
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeEEcCCC
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVLIVQNC 114 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~LVl~nI 114 (518)
+..-..-........+=|+|||+|.+...+.
T Consensus 69 -G~~~A~N~Gi~~a~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 69 -GIYDAMNKGIAMAQGRFALFLNSGDIFHQDA 99 (248)
T ss_pred -CHHHHHHHHHHHcCCCEEEEEeCCcccCcCH
Confidence 1111222333445689999999998887764
No 52
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=68.08 E-value=36 Score=33.01 Aligned_cols=95 Identities=11% Similarity=-0.082 Sum_probs=49.9
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhC-CCCeE-EEEECCCCCHHHHHHHHhcCC-eEEEEeeeCCCchhhhcccCCCch
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVN-TVHDL-AILITPGVTLAMKNELLKVFN-FVKEVDVFDSRDETNLRLLSRPDL 83 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~-s~~~l-vvLvt~~vs~~~r~~L~~~~~-~v~~V~~l~~~d~~~l~~~~rp~~ 83 (518)
...|.-+.|+. ..+.-++.||.+.. +...+ +|++.++-++...+.+++... ....|..+.... + .
T Consensus 3 vsIiIp~~Ne~--~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~--~--------~ 70 (241)
T cd06427 3 YTILVPLYKEA--EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQ--P--------R 70 (241)
T ss_pred EEEEEecCCcH--HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCC--C--------C
Confidence 34455556764 34456667777642 21112 234455667778888877532 111222222111 1 0
Q ss_pred hhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 84 GITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 84 ~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
+.....-..+....+|=|+|||+|+++-.+
T Consensus 71 G~~~a~n~g~~~a~gd~i~~~DaD~~~~~~ 100 (241)
T cd06427 71 TKPKACNYALAFARGEYVVIYDAEDAPDPD 100 (241)
T ss_pred chHHHHHHHHHhcCCCEEEEEcCCCCCChH
Confidence 112223334455678999999999987654
No 53
>PRK10073 putative glycosyl transferase; Provisional
Probab=67.94 E-value=25 Score=36.73 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=51.0
Q ss_pred CCEEEEEEecCh-hhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCc
Q psy7288 5 TGTAWVTLATND-SYALGALVVANSLKRVN-TVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 5 ~~~A~VTl~tnd-~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
.....|.-++|. .|+.. ++.||.... .+.. +|+++++-++.+.+.++++......|.++... +
T Consensus 6 p~vSVIIP~yN~~~~L~~---~l~Sl~~Qt~~~~E-IIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~---n-------- 70 (328)
T PRK10073 6 PKLSIIIPLYNAGKDFRA---FMESLIAQTWTALE-IIIVNDGSTDNSVEIAKHYAENYPHVRLLHQA---N-------- 70 (328)
T ss_pred CeEEEEEeccCCHHHHHH---HHHHHHhCCCCCeE-EEEEeCCCCccHHHHHHHHHhhCCCEEEEECC---C--------
Confidence 445555555664 45544 457777543 2333 34556666666666666542211122233221 1
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
.+....+-........+=|+|||+|-++..+
T Consensus 71 ~G~~~arN~gl~~a~g~yi~flD~DD~~~p~ 101 (328)
T PRK10073 71 AGVSVARNTGLAVATGKYVAFPDADDVVYPT 101 (328)
T ss_pred CChHHHHHHHHHhCCCCEEEEECCCCccChh
Confidence 1223344445556677889999999887765
No 54
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=67.90 E-value=8.3 Score=38.25 Aligned_cols=83 Identities=25% Similarity=0.333 Sum_probs=51.0
Q ss_pred hhHhHhhhh---ccCcCeEEEecCCeEEcCCC---hhhhCCCCcccc-cCCCCCCCCCceEEEEeCChHHHHHHHHHHHh
Q psy7288 86 TFTKIHAWR---LTQYSKCVFLDADVLIVQNC---DELFDREELSAA-PDAGWPDCFNSGVFVFKPSESTYNALVEFALV 158 (518)
Q Consensus 86 tftKL~~w~---L~eydKVVYLDaD~LVl~nI---DeLF~~~elaAa-pD~gwp~~FNSGVmVi~Ps~~~~~~Ll~~~~~ 158 (518)
-|.|=||-- |.+|+=|+|||+|+.|++.= +|..+- .+--. -|--+.--+.+|-.+++.+...-+-|.+++.-
T Consensus 27 ~fFrRHCvva~~L~~~~~vlflDaDigVvNp~~~iEefid~-~~Di~fydR~~n~Ei~agsYlvkNT~~~~~fl~~~a~~ 105 (222)
T PF03314_consen 27 KFFRRHCVVAKILPEYDWVLFLDADIGVVNPNRRIEEFIDE-GYDIIFYDRFFNWEIAAGSYLVKNTEYSRDFLKEWADY 105 (222)
T ss_pred HHHHHHHHHHHHhccCCEEEEEcCCceeecCcccHHHhcCC-CCcEEEEecccchhhhhccceeeCCHHHHHHHHHHhhh
Confidence 345555543 57899999999999999763 333321 11000 01000112458888899888777767666642
Q ss_pred ----cCCCCcCcccc
Q psy7288 159 ----NGSFDDATRQL 169 (518)
Q Consensus 159 ----~~s~d~~DQdl 169 (518)
..+|.|.|-|.
T Consensus 106 E~~lP~sfhGtDNGA 120 (222)
T PF03314_consen 106 EFKLPNSFHGTDNGA 120 (222)
T ss_pred CccCCCccccCccHH
Confidence 24788999998
No 55
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=67.19 E-value=27 Score=30.32 Aligned_cols=94 Identities=16% Similarity=0.016 Sum_probs=52.9
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhCCC-CeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhh
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVNTV-HDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGI 85 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~-~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~ 85 (518)
...+.-+.|.. ..+.-++.|+.+.... .. +|+++++-++...+.++........+..... ....+.
T Consensus 5 ~siiip~~n~~--~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~----------~~~~g~ 71 (291)
T COG0463 5 VSVVIPTYNEE--EYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLIN----------ERNGGL 71 (291)
T ss_pred EEEEEeccchh--hhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeec----------ccCCCh
Confidence 34444445554 6666777788775433 34 6677777777666666665443211111100 011234
Q ss_pred hhHhHhhhhccCcCeEEEecCCeEEcCCC
Q psy7288 86 TFTKIHAWRLTQYSKCVFLDADVLIVQNC 114 (518)
Q Consensus 86 tftKL~~w~L~eydKVVYLDaD~LVl~nI 114 (518)
.+.+-..+.....+-|+++|+|.+ ..+-
T Consensus 72 ~~~~~~~~~~~~~~~~~~~d~d~~-~~~~ 99 (291)
T COG0463 72 GAARNAGLEYARGDYIVFLDADDQ-HPPE 99 (291)
T ss_pred HHHHHhhHHhccCCEEEEEccCCC-CCHH
Confidence 455555555544599999999999 6543
No 56
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=65.74 E-value=27 Score=35.37 Aligned_cols=93 Identities=16% Similarity=0.188 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhhCCCCeEEE-EECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhHhHhhhhccCc
Q psy7288 20 LGALVVANSLKRVNTVHDLAI-LITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQY 98 (518)
Q Consensus 20 ~ga~VL~~SLr~~~s~~~lvv-Lvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tftKL~~w~L~ey 98 (518)
.-+.-++.+|........+.| +++.+-+....+.|.+.......+.++..... ...|+.+..+-.......-
T Consensus 17 ~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~-------~~~f~~a~arN~g~~~A~~ 89 (281)
T PF10111_consen 17 ERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDN-------GEPFSRAKARNIGAKYARG 89 (281)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCC-------CCCcCHHHHHHHHHHHcCC
Confidence 344455777877555555544 44545444443444433221111111111100 0113344455555666788
Q ss_pred CeEEEecCCeEEcCC-ChhhhC
Q psy7288 99 SKCVFLDADVLIVQN-CDELFD 119 (518)
Q Consensus 99 dKVVYLDaD~LVl~n-IDeLF~ 119 (518)
+-|+|||+|+++-.+ |..+..
T Consensus 90 d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 90 DYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred CEEEEEcCCeeeCHHHHHHHHH
Confidence 999999999999754 234443
No 57
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=64.50 E-value=41 Score=31.08 Aligned_cols=80 Identities=14% Similarity=0.176 Sum_probs=41.9
Q ss_pred HHHHHHHHHhhC-CCCeEEEEECCCC-CHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhHhHhhhhccCcC
Q psy7288 22 ALVVANSLKRVN-TVHDLAILITPGV-TLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQYS 99 (518)
Q Consensus 22 a~VL~~SLr~~~-s~~~lvvLvt~~v-s~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tftKL~~w~L~eyd 99 (518)
+.-++.||.... ....+ |++.++- ++.....++.+..... +.++.... + .+....+-+.+...+++
T Consensus 15 l~~~l~Sl~~q~~~~~ei-iivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~--n--------~G~~~a~N~g~~~a~gd 82 (201)
T cd04195 15 LREALESILKQTLPPDEV-VLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEK--N--------RGLGKALNEGLKHCTYD 82 (201)
T ss_pred HHHHHHHHHhcCCCCcEE-EEEECCCCchhHHHHHHHHHhcCC-eEEEEcCc--c--------ccHHHHHHHHHHhcCCC
Confidence 345566776643 23444 4454454 5556555554321110 22222111 1 12334455556667889
Q ss_pred eEEEecCCeEEcCC
Q psy7288 100 KCVFLDADVLIVQN 113 (518)
Q Consensus 100 KVVYLDaD~LVl~n 113 (518)
=|+|||+|.++..+
T Consensus 83 ~i~~lD~Dd~~~~~ 96 (201)
T cd04195 83 WVARMDTDDISLPD 96 (201)
T ss_pred EEEEeCCccccCcH
Confidence 99999999887654
No 58
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=63.58 E-value=42 Score=31.89 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=49.7
Q ss_pred EEEEEecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhh
Q psy7288 8 AWVTLATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITF 87 (518)
Q Consensus 8 A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tf 87 (518)
..|..+.|.. ...+.-++.||.+.. .+.++ ++.++-++.....|....... .+.++..... +...
T Consensus 3 sVvIp~~ne~-~~~l~~~l~sl~~q~-~~eii-vvdd~s~d~~~~~l~~~~~~~-~~~v~~~~~~-----------g~~~ 67 (235)
T cd06434 3 TVIIPVYDED-PDVFRECLRSILRQK-PLEII-VVTDGDDEPYLSILSQTVKYG-GIFVITVPHP-----------GKRR 67 (235)
T ss_pred EEEEeecCCC-hHHHHHHHHHHHhCC-CCEEE-EEeCCCChHHHHHHHhhccCC-cEEEEecCCC-----------ChHH
Confidence 3455556653 233344466777655 55554 445566666666653322111 1112211110 1111
Q ss_pred HhHhhhhccCcCeEEEecCCeEEcCC-Chhhh
Q psy7288 88 TKIHAWRLTQYSKCVFLDADVLIVQN-CDELF 118 (518)
Q Consensus 88 tKL~~w~L~eydKVVYLDaD~LVl~n-IDeLF 118 (518)
.....+....+|-|++||+|+++..+ |..|.
T Consensus 68 a~n~g~~~a~~d~v~~lD~D~~~~~~~l~~l~ 99 (235)
T cd06434 68 ALAEGIRHVTTDIVVLLDSDTVWPPNALPEML 99 (235)
T ss_pred HHHHHHHHhCCCEEEEECCCceeChhHHHHHH
Confidence 22233445689999999999999987 44444
No 59
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=63.52 E-value=44 Score=30.85 Aligned_cols=86 Identities=20% Similarity=0.127 Sum_probs=44.6
Q ss_pred EecChhhHHHHHHHHHHHHhhCC---CCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhH
Q psy7288 12 LATNDSYALGALVVANSLKRVNT---VHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFT 88 (518)
Q Consensus 12 l~tnd~Yl~ga~VL~~SLr~~~s---~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tft 88 (518)
-+.|+.. .+.-++.||.+... .+.+ +++.++-++.+.+.++.....++... ... + .+..+.
T Consensus 4 p~~ne~~--~i~~~l~sl~~~~~p~~~~ei-ivvdd~s~D~t~~~~~~~~~~~~~~~--~~~---~--------~gk~~a 67 (183)
T cd06438 4 PAHNEEA--VIGNTVRSLKAQDYPRELYRI-FVVADNCTDDTAQVARAAGATVLERH--DPE---R--------RGKGYA 67 (183)
T ss_pred eccchHH--HHHHHHHHHHhcCCCCcccEE-EEEeCCCCchHHHHHHHcCCeEEEeC--CCC---C--------CCHHHH
Confidence 3566653 33445567765432 2333 44555666777787777665432211 111 1 011122
Q ss_pred hHhhhhc-----cCcCeEEEecCCeEEcCC
Q psy7288 89 KIHAWRL-----TQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 89 KL~~w~L-----~eydKVVYLDaD~LVl~n 113 (518)
.-+.+.. ..++-|++||+|+++-.+
T Consensus 68 ln~g~~~a~~~~~~~d~v~~~DaD~~~~p~ 97 (183)
T cd06438 68 LDFGFRHLLNLADDPDAVVVFDADNLVDPN 97 (183)
T ss_pred HHHHHHHHHhcCCCCCEEEEEcCCCCCChh
Confidence 2222221 358999999999998643
No 60
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=63.32 E-value=20 Score=38.97 Aligned_cols=66 Identities=18% Similarity=0.337 Sum_probs=41.8
Q ss_pred hhhhHhHhhhh--c---cCcCeEEEecCCeEEcCCChhhhCCC--Cccc--ccCCCCC---------CCCCceEEEEeCC
Q psy7288 84 GITFTKIHAWR--L---TQYSKCVFLDADVLIVQNCDELFDRE--ELSA--APDAGWP---------DCFNSGVFVFKPS 145 (518)
Q Consensus 84 ~~tftKL~~w~--L---~eydKVVYLDaD~LVl~nIDeLF~~~--elaA--apD~gwp---------~~FNSGVmVi~Ps 145 (518)
...|.|+-+-+ + .+++=+.|||+|+||++- -|.++ .+.. ..-.||. .-+|+|+|+|+-+
T Consensus 179 p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNm---sfelPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNc 255 (429)
T PLN03182 179 AGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNC 255 (429)
T ss_pred CcchhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcC
Confidence 35577877655 2 478999999999999863 22222 1100 0012332 3589999999998
Q ss_pred hHHHHHH
Q psy7288 146 ESTYNAL 152 (518)
Q Consensus 146 ~~~~~~L 152 (518)
.|..+-|
T Consensus 256 qWSldlL 262 (429)
T PLN03182 256 QWSLDLL 262 (429)
T ss_pred HHHHHHH
Confidence 7765444
No 61
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=62.19 E-value=49 Score=31.36 Aligned_cols=30 Identities=23% Similarity=0.370 Sum_probs=23.3
Q ss_pred hhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 84 GITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 84 ~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
+..+.+-..++....+=++|||+|.++..+
T Consensus 71 G~~~a~N~g~~~a~gd~i~~lD~D~~~~~~ 100 (219)
T cd06913 71 GVGYAKNQAIAQSSGRYLCFLDSDDVMMPQ 100 (219)
T ss_pred cHHHHHHHHHHhcCCCEEEEECCCccCChh
Confidence 344566677778889999999999887654
No 62
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=61.02 E-value=56 Score=32.99 Aligned_cols=81 Identities=19% Similarity=0.103 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhCCCCe--EEEEECCCCCHHHHHHHHh-----cCCeEEEEeeeCCCchhhhcccCCCchhhhhHhHhh
Q psy7288 20 LGALVVANSLKRVNTVHD--LAILITPGVTLAMKNELLK-----VFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHA 92 (518)
Q Consensus 20 ~ga~VL~~SLr~~~s~~~--lvvLvt~~vs~~~r~~L~~-----~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tftKL~~ 92 (518)
..+.-++.||........ =+|+|+++-++.....+.+ ....+ .++.... + .+..-.+-..
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v---~vi~~~~--n--------~G~~~a~N~g 78 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKV---KVLRLKK--R--------EGLIRARIAG 78 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcE---EEEEcCC--C--------CCHHHHHHHH
Confidence 455556788876544321 3566776665655555532 12222 2222211 1 1112233334
Q ss_pred hhccCcCeEEEecCCeEEcCC
Q psy7288 93 WRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 93 w~L~eydKVVYLDaD~LVl~n 113 (518)
......+=|||||+|+++..+
T Consensus 79 ~~~A~gd~i~fLD~D~~~~~~ 99 (299)
T cd02510 79 ARAATGDVLVFLDSHCEVNVG 99 (299)
T ss_pred HHHccCCEEEEEeCCcccCcc
Confidence 445678999999999998644
No 63
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=59.01 E-value=51 Score=30.52 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=48.1
Q ss_pred EEEecChhhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHhcCCeE-EEEeeeCCCchhhhcccCCCchhhhh
Q psy7288 10 VTLATNDSYALGALVVANSLKRVN-TVHDLAILITPGVTLAMKNELLKVFNFV-KEVDVFDSRDETNLRLLSRPDLGITF 87 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~~r~~L~~~~~~v-~~V~~l~~~d~~~l~~~~rp~~~~tf 87 (518)
|.-+.|.. ..+.-++.||.+.. +...+ |+++++-++...+.++.+...- ..+.++.... + .+...
T Consensus 3 vIp~yn~~--~~l~~~l~sl~~q~~~~~ei-iVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~--~--------~G~~~ 69 (214)
T cd04196 3 LMATYNGE--KYLREQLDSILAQTYKNDEL-IISDDGSTDGTVEIIKEYIDKDPFIIILIRNGK--N--------LGVAR 69 (214)
T ss_pred EEEecCcH--HHHHHHHHHHHhCcCCCeEE-EEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCC--C--------ccHHH
Confidence 44455654 22345566776543 33333 3455555555666665543221 1112221111 1 11111
Q ss_pred HhHhhhhccCcCeEEEecCCeEEcCC-ChhhhC
Q psy7288 88 TKIHAWRLTQYSKCVFLDADVLIVQN-CDELFD 119 (518)
Q Consensus 88 tKL~~w~L~eydKVVYLDaD~LVl~n-IDeLF~ 119 (518)
..-.......++=|++||+|.++..+ |..|++
T Consensus 70 ~~n~g~~~~~g~~v~~ld~Dd~~~~~~l~~~~~ 102 (214)
T cd04196 70 NFESLLQAADGDYVFFCDQDDIWLPDKLERLLK 102 (214)
T ss_pred HHHHHHHhCCCCEEEEECCCcccChhHHHHHHH
Confidence 22223455678999999999877765 555554
No 64
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=57.65 E-value=5 Score=34.54 Aligned_cols=20 Identities=25% Similarity=0.494 Sum_probs=17.2
Q ss_pred EEEecCCeEEcCCC-hhhhCC
Q psy7288 101 CVFLDADVLIVQNC-DELFDR 120 (518)
Q Consensus 101 VVYLDaD~LVl~nI-DeLF~~ 120 (518)
=||+|.|+++++++ +.|.+-
T Consensus 79 GiY~D~D~~~~rpl~~~~~~~ 99 (103)
T PF04488_consen 79 GIYLDLDVICLRPLDDPWLPE 99 (103)
T ss_pred cEEEeCccccCcchhhhhhcc
Confidence 48999999999999 887653
No 65
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=57.26 E-value=47 Score=30.86 Aligned_cols=90 Identities=13% Similarity=0.021 Sum_probs=46.0
Q ss_pred EEecC-hhhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhH
Q psy7288 11 TLATN-DSYALGALVVANSLKRVN-TVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFT 88 (518)
Q Consensus 11 Tl~tn-d~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tft 88 (518)
+.+.| ..+ ..-++.||.+.. +... +|+++++-++...+.+++...... +.++.... +.. ....+.
T Consensus 3 I~~~n~~~~---l~~~l~sl~~q~~~~~e-iiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~--n~g------~~~~~n 69 (202)
T cd04185 3 VVTYNRLDL---LKECLDALLAQTRPPDH-IIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPE--NLG------GAGGFY 69 (202)
T ss_pred EEeeCCHHH---HHHHHHHHHhccCCCce-EEEEECCCCcchHHHHHHhcCCCc-eEEEECcc--ccc------hhhHHH
Confidence 34455 334 345566776542 3333 455666666677777776654321 22232221 111 011111
Q ss_pred hHhhhh-ccCcCeEEEecCCeEEcCC
Q psy7288 89 KIHAWR-LTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 89 KL~~w~-L~eydKVVYLDaD~LVl~n 113 (518)
+..-+- ..+++=|++||+|.++..+
T Consensus 70 ~~~~~a~~~~~d~v~~ld~D~~~~~~ 95 (202)
T cd04185 70 EGVRRAYELGYDWIWLMDDDAIPDPD 95 (202)
T ss_pred HHHHHHhccCCCEEEEeCCCCCcChH
Confidence 111111 2468999999999998765
No 66
>KOG3209|consensus
Probab=57.00 E-value=6.6 Score=45.05 Aligned_cols=61 Identities=26% Similarity=0.426 Sum_probs=40.3
Q ss_pred ccCCCCCCCCccccccccceeeecccchhhHHHhhhHhhhhccccCCCCCCCcccccchhhcccccccCCC
Q psy7288 268 DELGPLPPGWEQARTAEGQVYYLKGVLFMYTRLQAGLARALAQVPIGTPISAEQLAYEDHIHRQHWEEGHI 338 (518)
Q Consensus 268 ~e~~~l~~gwe~a~t~~g~~y~~~~~~~~~~~~~~~~a~~~sq~~i~~~~~~~~~~~ee~~rr~~WE~G~i 338 (518)
+.+++++..|||+.|..|..||.+|-+++.+ |.... +.- +.+++. +-++.+++-.||.+.-
T Consensus 218 ~~~gplp~nwemayte~gevyfiDhntktts-wLdpr------l~k--kaK~~e-eckd~elPygWeki~d 278 (984)
T KOG3209|consen 218 DNLGPLPHNWEMAYTEQGEVYFIDHNTKTTS-WLDPR------LTK--KAKPPE-ECKDQELPYGWEKIED 278 (984)
T ss_pred cccCCCCccceEeEeecCeeEeeecccccce-ecChh------hhc--ccCChh-hcccccccccccccCC
Confidence 4478899999999999999999999888755 32221 001 112221 2333447999998754
No 67
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=56.25 E-value=58 Score=30.03 Aligned_cols=92 Identities=20% Similarity=0.082 Sum_probs=47.0
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHH-HHHHHHhc---CCeEEEEeeeCCCchhhhcccCCC
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVN-TVHDLAILITPGVTLA-MKNELLKV---FNFVKEVDVFDSRDETNLRLLSRP 81 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~-~r~~L~~~---~~~v~~V~~l~~~d~~~l~~~~rp 81 (518)
..+|..+.|.. +..+.-++.||.+.. ....+ |+++++-++. ....++.. ...++.+ .... +
T Consensus 3 vsiii~~~n~~-~~~l~~~l~sl~~q~~~~~ei-ivvd~gs~d~~~~~~~~~~~~~~~~~~~~---~~~~--~------- 68 (202)
T cd04184 3 ISIVMPVYNTP-EKYLREAIESVRAQTYPNWEL-CIADDASTDPEVKRVLKKYAAQDPRIKVV---FREE--N------- 68 (202)
T ss_pred EEEEEecccCc-HHHHHHHHHHHHhCcCCCeEE-EEEeCCCCChHHHHHHHHHHhcCCCEEEE---Eccc--C-------
Confidence 45566667765 556667778887643 23333 4455454332 22333322 2222211 1110 1
Q ss_pred chhhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 82 DLGITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 82 ~~~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
.+........+.....+=|++||+|..+..+
T Consensus 69 -~g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~ 99 (202)
T cd04184 69 -GGISAATNSALELATGEFVALLDHDDELAPH 99 (202)
T ss_pred -CCHHHHHHHHHHhhcCCEEEEECCCCcCChH
Confidence 1222233444455677999999999987544
No 68
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=56.04 E-value=84 Score=33.31 Aligned_cols=114 Identities=19% Similarity=0.172 Sum_probs=52.8
Q ss_pred CCCEEEEEEecChhhHHHHHHHHHHHHhh-CC--CCeEEEEECCCCCHHHHHHHHhc-CCeEEEEe----eeCCCch---
Q psy7288 4 VTGTAWVTLATNDSYALGALVVANSLKRV-NT--VHDLAILITPGVTLAMKNELLKV-FNFVKEVD----VFDSRDE--- 72 (518)
Q Consensus 4 ~~~~A~VTl~tnd~Yl~ga~VL~~SLr~~-~s--~~~lvvLvt~~vs~~~r~~L~~~-~~~v~~V~----~l~~~d~--- 72 (518)
..+-|||+|+-|.. |.+++-.+++|-+. |. +||.|+|-+..++++-++.++.. ...+.... ...-++.
T Consensus 54 r~~Aafv~LvrN~d-L~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~~Ip~e~W~~P~~ID~ 132 (328)
T PF01793_consen 54 RENAAFVMLVRNSD-LEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFGLIPKEHWSYPDWIDQ 132 (328)
T ss_dssp ---EEEEEE--GGG-HHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEEE--GGGSS--TTS-H
T ss_pred CCceEEEEEEEchh-HHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEEEeCHHHcCCCCcCCH
Confidence 46789999998764 99999999999765 33 68899998888999988888764 23333211 1111111
Q ss_pred hh----hcccCCC--chh--hhh---Hh---Hhhhh---ccCcCeEEEecCCeEEcCCCh-hhh
Q psy7288 73 TN----LRLLSRP--DLG--ITF---TK---IHAWR---LTQYSKCVFLDADVLIVQNCD-ELF 118 (518)
Q Consensus 73 ~~----l~~~~rp--~~~--~tf---tK---L~~w~---L~eydKVVYLDaD~LVl~nID-eLF 118 (518)
.. ...+... -++ ..| .| -+.|+ |.+|+=.-=++.|+-+..+|+ ++|
T Consensus 133 ~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~YD~F 196 (328)
T PF01793_consen 133 EKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDIDYDPF 196 (328)
T ss_dssp HHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---S-HH
T ss_pred HHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCCCCHH
Confidence 10 0111100 001 111 11 12233 568999999999999999997 444
No 69
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=55.67 E-value=51 Score=35.02 Aligned_cols=103 Identities=14% Similarity=0.005 Sum_probs=49.8
Q ss_pred CEEEEEEecChhhHHHHHHHHHHHHhhC-C-CCeEEEEECCCCCHHHHHHHHhcCCeE---EEEeeeCCCchhhhcccCC
Q psy7288 6 GTAWVTLATNDSYALGALVVANSLKRVN-T-VHDLAILITPGVTLAMKNELLKVFNFV---KEVDVFDSRDETNLRLLSR 80 (518)
Q Consensus 6 ~~A~VTl~tnd~Yl~ga~VL~~SLr~~~-s-~~~lvvLvt~~vs~~~r~~L~~~~~~v---~~V~~l~~~d~~~l~~~~r 80 (518)
+...|..+.|+. ..+.-++.||.+.. + .+. +|+++++-++.+.+.+++..... ..+.++..... + .
T Consensus 41 ~VSVIIpa~Ne~--~~L~~~L~sL~~q~yp~~~e-IIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~-~-----~ 111 (384)
T TIGR03469 41 AVVAVVPARNEA--DVIGECVTSLLEQDYPGKLH-VILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPL-P-----P 111 (384)
T ss_pred CEEEEEecCCcH--hHHHHHHHHHHhCCCCCceE-EEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCC-C-----C
Confidence 455565667765 34456667887642 2 223 44566665666666655532110 01222322110 0 0
Q ss_pred CchhhhhHhHhhhhccC-----cCeEEEecCCeEEcCCC-hhh
Q psy7288 81 PDLGITFTKIHAWRLTQ-----YSKCVFLDADVLIVQNC-DEL 117 (518)
Q Consensus 81 p~~~~tftKL~~w~L~e-----ydKVVYLDaD~LVl~nI-DeL 117 (518)
...+..+.-...++... +|-++++|+|+++-.+. ..|
T Consensus 112 g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~l 154 (384)
T TIGR03469 112 GWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARL 154 (384)
T ss_pred CCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHH
Confidence 00111222222223233 89999999999875443 444
No 70
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=55.60 E-value=82 Score=30.46 Aligned_cols=86 Identities=19% Similarity=0.068 Sum_probs=50.1
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhh
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGIT 86 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~t 86 (518)
...|..+.|+.- .+.-++.||.... +=+|+++++-++.+.+.++..+..++.. ... +..
T Consensus 2 isvii~~~Ne~~--~l~~~l~sl~~~~---~eiivvD~gStD~t~~i~~~~~~~v~~~---~~~-------------g~~ 60 (229)
T cd02511 2 LSVVIITKNEER--NIERCLESVKWAV---DEIIVVDSGSTDRTVEIAKEYGAKVYQR---WWD-------------GFG 60 (229)
T ss_pred EEEEEEeCCcHH--HHHHHHHHHhccc---CEEEEEeCCCCccHHHHHHHcCCEEEEC---CCC-------------ChH
Confidence 345666677542 3344456665431 2355667776777788888766554322 110 112
Q ss_pred hHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 87 FTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 87 ftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
..+-+.......+=|++||+|.++..+
T Consensus 61 ~~~n~~~~~a~~d~vl~lDaD~~~~~~ 87 (229)
T cd02511 61 AQRNFALELATNDWVLSLDADERLTPE 87 (229)
T ss_pred HHHHHHHHhCCCCEEEEEeCCcCcCHH
Confidence 234445555677899999999887654
No 71
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=55.42 E-value=93 Score=34.25 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=51.5
Q ss_pred EEEEEEecC-hhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhh
Q psy7288 7 TAWVTLATN-DSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGI 85 (518)
Q Consensus 7 ~A~VTl~tn-d~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~ 85 (518)
.+.+.+++| ..|+.-++-.+...+-....++|+|-.+ +-.++..+.++.+++.+..|...+.... ....+..-..
T Consensus 95 ~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQD-g~~~~~~~vi~~y~~~v~~i~~~~~~~i---~~~~~~~~~~ 170 (434)
T PF03071_consen 95 IPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQD-GDDEEVAEVIKSYGDQVTYIQHPDFSPI---TIPPKEKKFK 170 (434)
T ss_dssp --EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE--TT-HHHHHHHHGGGGGSEEEE-S--S--------TT-GGGH
T ss_pred ceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEec-CCcHHHHHHHHHhhhhheeeecCCcCCc---eeCccccccc
Confidence 456667788 5667665544433332334566765544 4566777788888766665554432211 1101100012
Q ss_pred hhHhH---------hhhhccCcCeEEEecCCeEEcCCChhhh
Q psy7288 86 TFTKI---------HAWRLTQYSKCVFLDADVLIVQNCDELF 118 (518)
Q Consensus 86 tftKL---------~~w~L~eydKVVYLDaD~LVl~nIDeLF 118 (518)
.|.|| ++|....|++||.|.-|+.|--|+=+-|
T Consensus 171 ~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf 212 (434)
T PF03071_consen 171 GYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYF 212 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHH
Confidence 23332 2333346999999999999976654444
No 72
>cd00201 WW Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.
Probab=53.88 E-value=9.3 Score=25.22 Aligned_cols=22 Identities=41% Similarity=0.936 Sum_probs=19.0
Q ss_pred CCCCccccccccceeeecccch
Q psy7288 274 PPGWEQARTAEGQVYYLKGVLF 295 (518)
Q Consensus 274 ~~gwe~a~t~~g~~y~~~~~~~ 295 (518)
|.+|+...+.+|..||.++.+.
T Consensus 1 p~~W~~~~~~~g~~yy~n~~t~ 22 (31)
T cd00201 1 PPGWEERWDPDGRVYYYNHNTK 22 (31)
T ss_pred CCCCEEEECCCCCEEEEECCCC
Confidence 5789999999999999998655
No 73
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=53.19 E-value=48 Score=35.96 Aligned_cols=91 Identities=14% Similarity=0.081 Sum_probs=46.2
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHhc---CCeEEEEeeeCCCchhhhcccCCCc
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRV-NTVHDLAILITPGVTLAMKNELLKV---FNFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~-~s~~~lvvLvt~~vs~~~r~~L~~~---~~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
.+.+.-++|+.-. +.-++.|+.+. .++++++ +++++-+++..+.+++. ...++.+.. .. +.
T Consensus 77 vsViIP~yNE~~~--i~~~l~sll~q~yp~~eIi-vVdDgs~D~t~~~~~~~~~~~~~v~vv~~-~~----n~------- 141 (444)
T PRK14583 77 VSILVPCFNEGLN--ARETIHAALAQTYTNIEVI-AINDGSSDDTAQVLDALLAEDPRLRVIHL-AH----NQ------- 141 (444)
T ss_pred EEEEEEeCCCHHH--HHHHHHHHHcCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCCEEEEEe-CC----CC-------
Confidence 4555556786532 33445666543 4455554 44555455555554443 223332221 11 10
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
+.....-.......+|-++++|+|.++..|
T Consensus 142 -Gka~AlN~gl~~a~~d~iv~lDAD~~~~~d 171 (444)
T PRK14583 142 -GKAIALRMGAAAARSEYLVCIDGDALLDKN 171 (444)
T ss_pred -CHHHHHHHHHHhCCCCEEEEECCCCCcCHH
Confidence 111111222334678999999999998765
No 74
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=52.81 E-value=36 Score=30.89 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=47.7
Q ss_pred EecChhhHHHHHHHHHHHHhhCC---CCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhH
Q psy7288 12 LATNDSYALGALVVANSLKRVNT---VHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFT 88 (518)
Q Consensus 12 l~tnd~Yl~ga~VL~~SLr~~~s---~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tft 88 (518)
.+.|.. ..+.-++.||.+... .+. +++++++-++..++.++........+.++.... + .+....
T Consensus 4 ~~~n~~--~~l~~~l~sl~~~~~~~~~~e-iivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~--n--------~G~~~a 70 (185)
T cd04179 4 PAYNEE--ENIPELVERLLAVLEEGYDYE-IIVVDDGSTDGTAEIARELAARVPRVRVIRLSR--N--------FGKGAA 70 (185)
T ss_pred cccChH--hhHHHHHHHHHHHhccCCCEE-EEEEcCCCCCChHHHHHHHHHhCCCeEEEEccC--C--------CCccHH
Confidence 344543 334456677776543 333 344555544555666655433222222222211 1 122223
Q ss_pred hHhhhhccCcCeEEEecCCeEEcCC-ChhhhC
Q psy7288 89 KIHAWRLTQYSKCVFLDADVLIVQN-CDELFD 119 (518)
Q Consensus 89 KL~~w~L~eydKVVYLDaD~LVl~n-IDeLF~ 119 (518)
....+....-+=|++||+|..+..+ ++.|..
T Consensus 71 ~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~ 102 (185)
T cd04179 71 VRAGFKAARGDIVVTMDADLQHPPEDIPKLLE 102 (185)
T ss_pred HHHHHHHhcCCEEEEEeCCCCCCHHHHHHHHH
Confidence 3444445555889999999887654 455554
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=50.69 E-value=95 Score=32.94 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=50.2
Q ss_pred EEEEEecCh-hhHHHHHHHHHHHHhhCC---CCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhc---ccCC
Q psy7288 8 AWVTLATND-SYALGALVVANSLKRVNT---VHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLR---LLSR 80 (518)
Q Consensus 8 A~VTl~tnd-~Yl~ga~VL~~SLr~~~s---~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~---~~~r 80 (518)
+.|.+++|. .|+. -++.||++..+ ..+|+|. .++-.++..+.++.....++.+...+.... ++. .+..
T Consensus 3 PVlv~ayNRp~~l~---r~LesLl~~~p~~~~~~liIs-~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~-~~~~~~~~~~ 77 (334)
T cd02514 3 PVLVIACNRPDYLR---RMLDSLLSYRPSAEKFPIIVS-QDGGYEEVADVAKSFGDGVTHIQHPPISIK-NVNPPHKFQG 77 (334)
T ss_pred CEEEEecCCHHHHH---HHHHHHHhccccCCCceEEEE-eCCCchHHHHHHHhhccccEEEEccccccc-ccCcccccch
Confidence 345566764 3544 45567776542 3345444 445555566666665434433332221111 111 0000
Q ss_pred -Cchhh--hhHhHhhhhccCcCeEEEecCCeEEcCCCh
Q psy7288 81 -PDLGI--TFTKIHAWRLTQYSKCVFLDADVLIVQNCD 115 (518)
Q Consensus 81 -p~~~~--tftKL~~w~L~eydKVVYLDaD~LVl~nID 115 (518)
..+.. -+..=+++....|+++|+||-|+++--++=
T Consensus 78 y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf 115 (334)
T cd02514 78 YYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFF 115 (334)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHH
Confidence 00111 012223344446999999999999988743
No 76
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=48.09 E-value=53 Score=30.89 Aligned_cols=86 Identities=13% Similarity=0.113 Sum_probs=42.0
Q ss_pred EecChhhHHHHHHHHHHHHhhCCCCeE-EEEECCCCCHHHHHHHHhc---CCeEEEEeeeCCCchhhhcccCCCchhhhh
Q psy7288 12 LATNDSYALGALVVANSLKRVNTVHDL-AILITPGVTLAMKNELLKV---FNFVKEVDVFDSRDETNLRLLSRPDLGITF 87 (518)
Q Consensus 12 l~tnd~Yl~ga~VL~~SLr~~~s~~~l-vvLvt~~vs~~~r~~L~~~---~~~v~~V~~l~~~d~~~l~~~~rp~~~~tf 87 (518)
.+.|.. ..+.-++.||........+ +|+++++-++...+.++.+ +..++ ++.... + .+...
T Consensus 4 p~yn~~--~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~---~~~~~~--n--------~G~~~ 68 (224)
T cd06442 4 PTYNER--ENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVR---LIVRPG--K--------RGLGS 68 (224)
T ss_pred eccchh--hhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceE---EEecCC--C--------CChHH
Confidence 345543 2345666777654322233 3455655555555554443 22222 221110 1 12222
Q ss_pred HhHhhhhccCcCeEEEecCCeEEcC
Q psy7288 88 TKIHAWRLTQYSKCVFLDADVLIVQ 112 (518)
Q Consensus 88 tKL~~w~L~eydKVVYLDaD~LVl~ 112 (518)
...........+-|++||+|.++..
T Consensus 69 a~n~g~~~a~gd~i~~lD~D~~~~~ 93 (224)
T cd06442 69 AYIEGFKAARGDVIVVMDADLSHPP 93 (224)
T ss_pred HHHHHHHHcCCCEEEEEECCCCCCH
Confidence 3334444556688999999987653
No 77
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=46.21 E-value=92 Score=37.22 Aligned_cols=94 Identities=10% Similarity=-0.032 Sum_probs=48.0
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhCCCCeE-EEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhh
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVNTVHDL-AILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGI 85 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~l-vvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~ 85 (518)
.+.+.-++|+.--.-...+...+....+..++ +++++++-+++.++..++.+..++. -++..+ +.
T Consensus 262 VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~~v~yI~-----R~~n~~---------gK 327 (852)
T PRK11498 262 VDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEVGVKYIA-----RPTHEH---------AK 327 (852)
T ss_pred EEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHCCcEEEE-----eCCCCc---------ch
Confidence 34444457875222112233333333333233 3456777777888777776543321 111000 01
Q ss_pred hhHhHhhhhccCcCeEEEecCCeEEcCCC
Q psy7288 86 TFTKIHAWRLTQYSKCVFLDADVLIVQNC 114 (518)
Q Consensus 86 tftKL~~w~L~eydKVVYLDaD~LVl~nI 114 (518)
.-..-+..+..++|=|++||||.++..|.
T Consensus 328 AGnLN~aL~~a~GEyIavlDAD~ip~pdf 356 (852)
T PRK11498 328 AGNINNALKYAKGEFVAIFDCDHVPTRSF 356 (852)
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCCChHH
Confidence 11112223346789999999999987665
No 78
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=45.89 E-value=1.5e+02 Score=32.22 Aligned_cols=93 Identities=12% Similarity=0.028 Sum_probs=49.7
Q ss_pred CEEEEEEecChhhHHHHHHHHHHHHhhC-CCCeE-EEEECCCCCHHHHHHHHh---cCCeEEEEeeeCCCchhhhcccCC
Q psy7288 6 GTAWVTLATNDSYALGALVVANSLKRVN-TVHDL-AILITPGVTLAMKNELLK---VFNFVKEVDVFDSRDETNLRLLSR 80 (518)
Q Consensus 6 ~~A~VTl~tnd~Yl~ga~VL~~SLr~~~-s~~~l-vvLvt~~vs~~~r~~L~~---~~~~v~~V~~l~~~d~~~l~~~~r 80 (518)
+.+.|.-+.|+. ..+.-++.||.+.. +...+ +++++++-+++..+.+++ .+..+. +..++...
T Consensus 50 ~vsVIIP~yNe~--~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~-v~~~~~~~--------- 117 (439)
T TIGR03111 50 DITIIIPVYNSE--DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS-LRYMNSDQ--------- 117 (439)
T ss_pred CEEEEEEeCCCh--HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE-EEEeCCCC---------
Confidence 455565667766 34455666776543 33223 556677777777666543 233332 22222210
Q ss_pred CchhhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 81 PDLGITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 81 p~~~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
+.....-...+....+=|+++|+|.++..|
T Consensus 118 ---Gka~AlN~gl~~s~g~~v~~~DaD~~~~~d 147 (439)
T TIGR03111 118 ---GKAKALNAAIYNSIGKYIIHIDSDGKLHKD 147 (439)
T ss_pred ---CHHHHHHHHHHHccCCEEEEECCCCCcChH
Confidence 112222233344556779999999998654
No 79
>KOG1924|consensus
Probab=44.77 E-value=60 Score=38.10 Aligned_cols=11 Identities=18% Similarity=0.244 Sum_probs=5.4
Q ss_pred hHHHHHHHHHH
Q psy7288 146 ESTYNALVEFA 156 (518)
Q Consensus 146 ~~~~~~Ll~~~ 156 (518)
+..+++++..+
T Consensus 267 e~~~ekvl~ai 277 (1102)
T KOG1924|consen 267 ENGLEKVLEAI 277 (1102)
T ss_pred hhHHHHHHHHH
Confidence 44455555444
No 80
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=42.57 E-value=76 Score=29.67 Aligned_cols=96 Identities=8% Similarity=0.047 Sum_probs=45.7
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHhc---CCeEEEEeeeCCCchhhhcccCCCc
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRV-NTVHDLAILITPGVTLAMKNELLKV---FNFVKEVDVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~-~s~~~lvvLvt~~vs~~~r~~L~~~---~~~v~~V~~l~~~d~~~l~~~~rp~ 82 (518)
...|.-+.|... .+.-++.||.+. .+.+.++| ++++-++...+.++++ +..+ .+.++.... +...
T Consensus 3 vsviip~~n~~~--~l~~~L~sl~~q~~~~~eiiv-Vdd~s~d~t~~~~~~~~~~~~~~-~~~~~~~~~--~~g~----- 71 (196)
T cd02520 3 VSILKPLCGVDP--NLYENLESFFQQDYPKYEILF-CVQDEDDPAIPVVRKLIAKYPNV-DARLLIGGE--KVGI----- 71 (196)
T ss_pred eEEEEecCCCCc--cHHHHHHHHHhccCCCeEEEE-EeCCCcchHHHHHHHHHHHCCCC-cEEEEecCC--cCCC-----
Confidence 344555566543 245567777764 34455554 4444455555555443 2211 111111110 1000
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
.+........+....++=+++||+|+++-.+
T Consensus 72 ~~~~~~~n~g~~~a~~d~i~~~D~D~~~~~~ 102 (196)
T cd02520 72 NPKVNNLIKGYEEARYDILVISDSDISVPPD 102 (196)
T ss_pred CHhHHHHHHHHHhCCCCEEEEECCCceEChh
Confidence 0111111233445678999999999987543
No 81
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=42.33 E-value=1.6e+02 Score=28.04 Aligned_cols=23 Identities=13% Similarity=0.219 Sum_probs=18.1
Q ss_pred hhhhccCcCeEEEecCCeEEcCC
Q psy7288 91 HAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 91 ~~w~L~eydKVVYLDaD~LVl~n 113 (518)
..++..+++=|++||+|+++..+
T Consensus 81 ~g~~~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 81 EGMKVAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred HHHHhCCCCEEEEEcCCCCCChH
Confidence 34456689999999999998654
No 82
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=42.06 E-value=59 Score=33.40 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=34.7
Q ss_pred EEEecCCeEEcCCChhhhCCCCcccc--cCC-CCC---CCCCceEEEEeCChHHHHHHHHHHHh
Q psy7288 101 CVFLDADVLIVQNCDELFDREELSAA--PDA-GWP---DCFNSGVFVFKPSESTYNALVEFALV 158 (518)
Q Consensus 101 VVYLDaD~LVl~nIDeLF~~~elaAa--pD~-gwp---~~FNSGVmVi~Ps~~~~~~Ll~~~~~ 158 (518)
=|||||++++.++|++++.-..+.+. ++. +.. ..+.+++|.-.+....++.+.+.+.+
T Consensus 125 GvWiDatv~~t~~l~~~~~~~~ff~~~~~~~~~~~~~~~~w~~~fi~a~~~n~~~~~~~~~~~~ 188 (276)
T PF05704_consen 125 GVWIDATVYLTKPLDDEIFDSDFFSFSRPDKDYNPISISSWTNFFIAAKKGNPFIKFWRDLLLE 188 (276)
T ss_pred cEEeCCceEECCchhHHHhcCCeeEEeccCcCcccchHHHhHhhheeECCCCHHHHHHHHHHHH
Confidence 37999999999999977543323221 111 100 12345566777776666666666544
No 83
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=41.65 E-value=5.9e+02 Score=29.10 Aligned_cols=21 Identities=29% Similarity=0.305 Sum_probs=8.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCC
Q psy7288 476 ETPGAPEPVPSPAAPAPVETP 496 (518)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~ 496 (518)
|+||-++++.-+-.+-.++++
T Consensus 712 gTPgTp~tp~pP~~P~dp~sP 732 (943)
T PTZ00449 712 GTPFTTPRPLPPKLPRDEEFP 732 (943)
T ss_pred CCCCCCCCCCCCCCCCCCCCC
Confidence 344444444434334344443
No 84
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=40.74 E-value=1.2e+02 Score=29.66 Aligned_cols=101 Identities=18% Similarity=0.184 Sum_probs=51.9
Q ss_pred EEEEEEecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHh---cCCeEEEEe-eeCCCchhhhcccCCCc
Q psy7288 7 TAWVTLATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLK---VFNFVKEVD-VFDSRDETNLRLLSRPD 82 (518)
Q Consensus 7 ~A~VTl~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~---~~~~v~~V~-~l~~~d~~~l~~~~rp~ 82 (518)
.||+.++... -...+..+++.|. .++..++|.++...+....+.++. .+..|+.|. .++.. ...
T Consensus 1 iAylil~h~~-~~~~~~~l~~~l~--~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~v~~r~~v~-WG~-------- 68 (244)
T PF02485_consen 1 IAYLILAHKN-DPEQLERLLRLLY--HPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHFVPKRVDVR-WGG-------- 68 (244)
T ss_dssp EEEEEEESS---HHHHHHHHHHH----TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE-SS------TTS--------
T ss_pred CEEEEEecCC-CHHHHHHHHHHhc--CCCCEEEEEEcCCCChHHHHHHHHhcccCCceeecccccccc-cCC--------
Confidence 4888887442 3566677777776 456678888887777666666664 233344333 11110 000
Q ss_pred hhhhhHhHhhhh--c---cCcCeEEEecCCeEEcCCChhhhC
Q psy7288 83 LGITFTKIHAWR--L---TQYSKCVFLDADVLIVQNCDELFD 119 (518)
Q Consensus 83 ~~~tftKL~~w~--L---~eydKVVYLDaD~LVl~nIDeLF~ 119 (518)
+.....-|.|.+ + .+++.++.|..+.+.+.+.++|.+
T Consensus 69 ~S~v~A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~ 110 (244)
T PF02485_consen 69 FSLVEATLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHE 110 (244)
T ss_dssp HHHHHHHHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCcEEEEcccccccccchHHHHH
Confidence 111111122222 2 379999999999999999998864
No 85
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=40.35 E-value=1.3e+02 Score=28.03 Aligned_cols=84 Identities=19% Similarity=0.130 Sum_probs=43.8
Q ss_pred EEEecChhhHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhH
Q psy7288 10 VTLATNDSYALGALVVANSLKRVN-TVHDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFT 88 (518)
Q Consensus 10 VTl~tnd~Yl~ga~VL~~SLr~~~-s~~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tft 88 (518)
|..+.|.. ..+.-++.||.+.. ....+ |+++++-.+...+.+++. .++ ++.... +....
T Consensus 4 ii~~~n~~--~~l~~~l~sl~~q~~~~~ev-ivvdd~s~d~~~~~~~~~--~~~---~~~~~~------------g~~~a 63 (221)
T cd02522 4 IIPTLNEA--ENLPRLLASLRRLNPLPLEI-IVVDGGSTDGTVAIARSA--GVV---VISSPK------------GRARQ 63 (221)
T ss_pred EEEccCcH--HHHHHHHHHHHhccCCCcEE-EEEeCCCCccHHHHHhcC--CeE---EEeCCc------------CHHHH
Confidence 33444543 23455666776653 33334 455666666666666652 122 111110 11122
Q ss_pred hHhhhhccCcCeEEEecCCeEEcCC
Q psy7288 89 KIHAWRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 89 KL~~w~L~eydKVVYLDaD~LVl~n 113 (518)
.-..+.....+-|++||+|..+..+
T Consensus 64 ~n~g~~~a~~~~i~~~D~D~~~~~~ 88 (221)
T cd02522 64 MNAGAAAARGDWLLFLHADTRLPPD 88 (221)
T ss_pred HHHHHHhccCCEEEEEcCCCCCChh
Confidence 2334445568999999999887654
No 86
>PRK10018 putative glycosyl transferase; Provisional
Probab=37.87 E-value=3.7e+02 Score=27.45 Aligned_cols=99 Identities=13% Similarity=0.036 Sum_probs=49.7
Q ss_pred CCCEEEEEEecCh-hhHHHHHHHHHHHHhh-CCCCeEEEEECCCCC--HHHHHHHHhcCCeEEEEeeeCCCchhhhcccC
Q psy7288 4 VTGTAWVTLATND-SYALGALVVANSLKRV-NTVHDLAILITPGVT--LAMKNELLKVFNFVKEVDVFDSRDETNLRLLS 79 (518)
Q Consensus 4 ~~~~A~VTl~tnd-~Yl~ga~VL~~SLr~~-~s~~~lvvLvt~~vs--~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~ 79 (518)
......|+.+.|. .|+. -.+.||... ..+..++ +++++-+ +...+.+....+. .|.++.... +
T Consensus 4 ~p~VSVIip~yN~~~~l~---~~l~Svl~Qt~~~~EiI-VVDDgS~~~~~~~~~~~~~~~~--ri~~i~~~~--n----- 70 (279)
T PRK10018 4 NPLISIYMPTWNRQQLAI---RAIKSVLRQDYSNWEMI-IVDDCSTSWEQLQQYVTALNDP--RITYIHNDI--N----- 70 (279)
T ss_pred CCEEEEEEEeCCCHHHHH---HHHHHHHhCCCCCeEEE-EEECCCCCHHHHHHHHHHcCCC--CEEEEECCC--C-----
Confidence 3445566666674 4443 355666653 3333443 4444433 2223333433221 122222211 1
Q ss_pred CCchhhhhHhHhhhhccCcCeEEEecCCeEEcCC-Chhhh
Q psy7288 80 RPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQN-CDELF 118 (518)
Q Consensus 80 rp~~~~tftKL~~w~L~eydKVVYLDaD~LVl~n-IDeLF 118 (518)
.+....+-........+=|+|||+|.++..+ |..+.
T Consensus 71 ---~G~~~a~N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~ 107 (279)
T PRK10018 71 ---SGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFL 107 (279)
T ss_pred ---CCHHHHHHHHHHHcCCCEEEEECCCCCCCccHHHHHH
Confidence 1333344445556778999999999988765 44443
No 87
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=35.65 E-value=7.3e+02 Score=28.47 Aligned_cols=19 Identities=32% Similarity=0.137 Sum_probs=11.1
Q ss_pred CCCHHHHHHHHhcCCeEEE
Q psy7288 45 GVTLAMKNELLKVFNFVKE 63 (518)
Q Consensus 45 ~vs~~~r~~L~~~~~~v~~ 63 (518)
++.....+.|.+.|..|+.
T Consensus 91 gIG~aLAr~LLk~G~~Vva 109 (576)
T PLN03209 91 KVGSRTVRELLKLGFRVRA 109 (576)
T ss_pred HHHHHHHHHHHHCCCeEEE
Confidence 3555666666666666543
No 88
>KOG1891|consensus
Probab=35.57 E-value=22 Score=35.55 Aligned_cols=29 Identities=41% Similarity=0.692 Sum_probs=25.3
Q ss_pred ccCCCCCCCCccccccccceeeecccchh
Q psy7288 268 DELGPLPPGWEQARTAEGQVYYLKGVLFM 296 (518)
Q Consensus 268 ~e~~~l~~gwe~a~t~~g~~y~~~~~~~~ 296 (518)
.+.-+||+||....|-.|++||++|-+.+
T Consensus 89 sedlPLPpgWav~~T~~grkYYIDHn~~t 117 (271)
T KOG1891|consen 89 SEDLPLPPGWAVEFTTEGRKYYIDHNNRT 117 (271)
T ss_pred cccCCCCCCcceeeEecCceeEeecCCCc
Confidence 45679999999999999999999996654
No 89
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=34.75 E-value=2e+02 Score=29.75 Aligned_cols=102 Identities=21% Similarity=0.155 Sum_probs=50.8
Q ss_pred CEEEEEEecChhhHHHHHHHHHHHHhhCC-CC-eEEEEECCCCCHHHHHHHHhcCCeEEEE-eeeCCCchhhhcccCCCc
Q psy7288 6 GTAWVTLATNDSYALGALVVANSLKRVNT-VH-DLAILITPGVTLAMKNELLKVFNFVKEV-DVFDSRDETNLRLLSRPD 82 (518)
Q Consensus 6 ~~A~VTl~tnd~Yl~ga~VL~~SLr~~~s-~~-~lvvLvt~~vs~~~r~~L~~~~~~v~~V-~~l~~~d~~~l~~~~rp~ 82 (518)
+...|.-+.|..-. +.-++.||++... .. .-+|+++++-++.+.+.+++.+..++.. ..+.. ...+ .-
T Consensus 32 ~vSVVIPayNee~~--I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~-~~~n------~G 102 (306)
T PRK13915 32 TVSVVLPALNEEET--VGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPE-LPPR------PG 102 (306)
T ss_pred CEEEEEecCCcHHH--HHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhc-cccC------CC
Confidence 44445455676433 2334556665321 11 2345567777777888888776543321 11100 0001 01
Q ss_pred hhhhhHhHhhhhccCcCeEEEecCCeE-Ec-CCChhhh
Q psy7288 83 LGITFTKIHAWRLTQYSKCVFLDADVL-IV-QNCDELF 118 (518)
Q Consensus 83 ~~~tftKL~~w~L~eydKVVYLDaD~L-Vl-~nIDeLF 118 (518)
.+... ...+.....|-|+|||+|.. .- +-|..|.
T Consensus 103 kg~A~--~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~ 138 (306)
T PRK13915 103 KGEAL--WRSLAATTGDIVVFVDADLINFDPMFVPGLL 138 (306)
T ss_pred HHHHH--HHHHHhcCCCEEEEEeCccccCCHHHHHHHH
Confidence 12221 12234467899999999997 32 2344444
No 90
>PF15324 TALPID3: Hedgehog signalling target
Probab=34.30 E-value=6e+02 Score=31.26 Aligned_cols=11 Identities=18% Similarity=0.274 Sum_probs=6.0
Q ss_pred CCCCCCCCCCC
Q psy7288 470 APPTPAETPGA 480 (518)
Q Consensus 470 ~~~~~~~~~~~ 480 (518)
.|-.++++|-+
T Consensus 1071 mSva~deEpes 1081 (1252)
T PF15324_consen 1071 MSVAKDEEPES 1081 (1252)
T ss_pred eecCCCCCccc
Confidence 34455667644
No 91
>PF15402 Spc7_N: N-terminus of kinetochore NMS complex subunit Spc7
Probab=33.14 E-value=8.6e+02 Score=29.57 Aligned_cols=12 Identities=8% Similarity=0.030 Sum_probs=6.8
Q ss_pred CCCCceEEEEeC
Q psy7288 133 DCFNSGVFVFKP 144 (518)
Q Consensus 133 ~~FNSGVmVi~P 144 (518)
+.+-.++|.+.-
T Consensus 304 d~dDgt~~~m~~ 315 (927)
T PF15402_consen 304 DDDDGTMMTMSM 315 (927)
T ss_pred cCCCCceeeeec
Confidence 455566666544
No 92
>PF15238 FAM181: FAM181
Probab=32.48 E-value=20 Score=37.33 Aligned_cols=18 Identities=56% Similarity=1.014 Sum_probs=15.8
Q ss_pred ccccccCCCCCcccCCCC
Q psy7288 170 QKPLNMRNLPKSFFQPPS 187 (518)
Q Consensus 170 ~~pL~mr~lpN~~F~~~~ 187 (518)
|||||+|+||-+||.+..
T Consensus 124 qVPmRkRnLPaSFfeEP~ 141 (297)
T PF15238_consen 124 QVPMRKRNLPASFFEEPR 141 (297)
T ss_pred CCchhhccCCccccCCCC
Confidence 678999999999999853
No 93
>COG5020 KTR1 Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=31.23 E-value=1.8e+02 Score=31.57 Aligned_cols=55 Identities=18% Similarity=0.112 Sum_probs=44.0
Q ss_pred CCCEEEEEEecChhhHHHHHHHHHHHHhh-C--CCCeEEEEECCCCCHHHHHHHHhcCC
Q psy7288 4 VTGTAWVTLATNDSYALGALVVANSLKRV-N--TVHDLAILITPGVTLAMKNELLKVFN 59 (518)
Q Consensus 4 ~~~~A~VTl~tnd~Yl~ga~VL~~SLr~~-~--s~~~lvvLvt~~vs~~~r~~L~~~~~ 59 (518)
..+.+||+|+.|.. |.+++-.++||-.+ | =.|+-|.|-+..++++-++...++-.
T Consensus 80 r~natfv~L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~~s 137 (399)
T COG5020 80 RENATFVMLARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDITS 137 (399)
T ss_pred CcccEEEEEEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHHhc
Confidence 34668999999988 99999999999865 2 35888888888888888877776543
No 94
>KOG4472|consensus
Probab=31.23 E-value=1.8e+02 Score=31.57 Aligned_cols=55 Identities=18% Similarity=0.112 Sum_probs=44.0
Q ss_pred CCCEEEEEEecChhhHHHHHHHHHHHHhh-C--CCCeEEEEECCCCCHHHHHHHHhcCC
Q psy7288 4 VTGTAWVTLATNDSYALGALVVANSLKRV-N--TVHDLAILITPGVTLAMKNELLKVFN 59 (518)
Q Consensus 4 ~~~~A~VTl~tnd~Yl~ga~VL~~SLr~~-~--s~~~lvvLvt~~vs~~~r~~L~~~~~ 59 (518)
..+.+||+|+.|.. |.+++-.++||-.+ | =.|+-|.|-+..++++-++...++-.
T Consensus 80 r~natfv~L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~~s 137 (399)
T KOG4472|consen 80 RENATFVMLARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDITS 137 (399)
T ss_pred CcccEEEEEEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHHhc
Confidence 34668999999988 99999999999865 2 35888888888888888877776543
No 95
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=30.63 E-value=1.9e+02 Score=26.22 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=17.2
Q ss_pred ccCcCeEEEecCCeEEcCC-ChhhhC
Q psy7288 95 LTQYSKCVFLDADVLIVQN-CDELFD 119 (518)
Q Consensus 95 L~eydKVVYLDaD~LVl~n-IDeLF~ 119 (518)
....+=|+++|+|.....+ ++.|.+
T Consensus 78 ~a~~d~i~~~D~D~~~~~~~l~~l~~ 103 (181)
T cd04187 78 HARGDAVITMDADLQDPPELIPEMLA 103 (181)
T ss_pred hcCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 3455889999999987543 455544
No 96
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=30.22 E-value=4.9e+02 Score=27.02 Aligned_cols=93 Identities=14% Similarity=0.142 Sum_probs=45.0
Q ss_pred CCCEEEEEEecChh-hHHHHHHHHHH-HHhhCCCCeEEEEECCCCCHHHHHHHHhc----CCeEEEEeeeCCCchhhhcc
Q psy7288 4 VTGTAWVTLATNDS-YALGALVVANS-LKRVNTVHDLAILITPGVTLAMKNELLKV----FNFVKEVDVFDSRDETNLRL 77 (518)
Q Consensus 4 ~~~~A~VTl~tnd~-Yl~ga~VL~~S-Lr~~~s~~~lvvLvt~~vs~~~r~~L~~~----~~~v~~V~~l~~~d~~~l~~ 77 (518)
..+...|.-+.|+. .+..++--+.+ +.+....+.+ |+++++-++.+.+.+++. +..++.+.. .. +
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EI-IvVDDgS~D~T~~il~~~~~~~~~~v~~i~~--~~---n--- 75 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEI-LLIDDGSSDNSAEMLVEAAQAPDSHIVAILL--NR---N--- 75 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEE-EEEeCCCCCcHHHHHHHHHhhcCCcEEEEEe--CC---C---
Confidence 34455555567764 34333322222 2333334444 455666566666665543 233332221 11 1
Q ss_pred cCCCchhhhhHhHhhhhccCcCeEEEecCCeEE
Q psy7288 78 LSRPDLGITFTKIHAWRLTQYSKCVFLDADVLI 110 (518)
Q Consensus 78 ~~rp~~~~tftKL~~w~L~eydKVVYLDaD~LV 110 (518)
++........+.....|-|++||+|...
T Consensus 76 -----~G~~~A~~~G~~~A~gd~vv~~DaD~q~ 103 (325)
T PRK10714 76 -----YGQHSAIMAGFSHVTGDLIITLDADLQN 103 (325)
T ss_pred -----CCHHHHHHHHHHhCCCCEEEEECCCCCC
Confidence 1211222233444578999999999874
No 97
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=29.96 E-value=3.1e+02 Score=22.48 Aligned_cols=70 Identities=19% Similarity=0.098 Sum_probs=36.6
Q ss_pred CeEEEEECCCCCHHHHHHHHhcCCeEEEEeeeCCCchhhhcccCCCchhhhhHhHhhhhccCcCeEEEecCCeEEcCCC
Q psy7288 36 HDLAILITPGVTLAMKNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNC 114 (518)
Q Consensus 36 ~~lvvLvt~~vs~~~r~~L~~~~~~v~~V~~l~~~d~~~l~~~~rp~~~~tftKL~~w~L~eydKVVYLDaD~LVl~nI 114 (518)
.+-+++++.+-++...+.|++... +..+.... +. ........+.+..+-...+++=|+++|+|=++.-+-
T Consensus 19 ~d~i~i~d~~s~D~t~~~l~~~~~-v~i~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~dWvl~~D~DEfl~~~~ 88 (97)
T PF13704_consen 19 VDHIYIYDDGSTDGTREILRALPG-VGIIRWVD-PY-------RDERRQRAWRNALIERAFDADWVLFLDADEFLVPPP 88 (97)
T ss_pred CCEEEEEECCCCccHHHHHHhCCC-cEEEEeCC-Cc-------cchHHHHHHHHHHHHhCCCCCEEEEEeeeEEEecCC
Confidence 344555666767778888877632 32222211 11 000111222333222335789999999998876544
No 98
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=29.13 E-value=3.8e+02 Score=25.34 Aligned_cols=16 Identities=19% Similarity=0.185 Sum_probs=13.2
Q ss_pred CcCeEEEecCCeEEcC
Q psy7288 97 QYSKCVFLDADVLIVQ 112 (518)
Q Consensus 97 eydKVVYLDaD~LVl~ 112 (518)
.+|=|++||+|.++-.
T Consensus 84 ~~d~i~~lD~D~~~~~ 99 (236)
T cd06435 84 DAEIIAVIDADYQVEP 99 (236)
T ss_pred CCCEEEEEcCCCCcCH
Confidence 3789999999987654
No 99
>PF12238 MSA-2c: Merozoite surface antigen 2c; InterPro: IPR021060 This family of proteins are restricted to the apicomplexan Babesia bovis. Proteins in this entry are typically between 263 and 318 amino acids in length and plasma membrane glycoproteins. These antigens present on the merozoite surface (MSA) and are involved in the parasite invasion of the bovine erythrocyte. MSA-2c has been suggested as a possible antigen for a vaccine candidate [].
Probab=28.45 E-value=1.4e+02 Score=29.67 Aligned_cols=11 Identities=9% Similarity=0.329 Sum_probs=8.4
Q ss_pred hHHHHHHhhhc
Q psy7288 346 WDNIWKKISQT 356 (518)
Q Consensus 346 f~nIqkKld~~ 356 (518)
|-+|-+-++.|
T Consensus 121 f~~l~~~~~~f 131 (205)
T PF12238_consen 121 FMKLYKAFNTF 131 (205)
T ss_pred HHHHHHHHHHH
Confidence 55888888887
No 100
>KOG3837|consensus
Probab=27.83 E-value=4.4e+02 Score=29.12 Aligned_cols=17 Identities=41% Similarity=0.649 Sum_probs=8.4
Q ss_pred CCCCCcCCCCCCCCCCC
Q psy7288 383 PTVPEVKPAASVEPVPV 399 (518)
Q Consensus 383 ~~~~~~~~~~~~~~~~~ 399 (518)
++++..||-++-.++-+
T Consensus 48 Ppp~~lkP~~s~ap~~p 64 (523)
T KOG3837|consen 48 PPPPGLKPGDSDAPVRP 64 (523)
T ss_pred CCCCCCCccccCCCCCC
Confidence 34555666655444433
No 101
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=27.68 E-value=3.9e+02 Score=28.14 Aligned_cols=21 Identities=14% Similarity=0.158 Sum_probs=17.0
Q ss_pred hhccCcCeEEEecCCeEEcCC
Q psy7288 93 WRLTQYSKCVFLDADVLIVQN 113 (518)
Q Consensus 93 w~L~eydKVVYLDaD~LVl~n 113 (518)
.+..++|-++++|+|+++-.+
T Consensus 122 ~~~a~ge~i~~~DaD~~~~p~ 142 (373)
T TIGR03472 122 LPHARHDILVIADSDISVGPD 142 (373)
T ss_pred HHhccCCEEEEECCCCCcChh
Confidence 445689999999999988654
No 102
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=27.51 E-value=3.9e+02 Score=25.83 Aligned_cols=21 Identities=24% Similarity=0.241 Sum_probs=15.7
Q ss_pred hhhhccCcCeEEEecCCeEEc
Q psy7288 91 HAWRLTQYSKCVFLDADVLIV 111 (518)
Q Consensus 91 ~~w~L~eydKVVYLDaD~LVl 111 (518)
..+.....+-|++||+|..+.
T Consensus 87 ~g~~~a~g~~i~~lD~D~~~~ 107 (243)
T PLN02726 87 HGLKHASGDFVVIMDADLSHH 107 (243)
T ss_pred HHHHHcCCCEEEEEcCCCCCC
Confidence 344456789999999998753
No 103
>KOG3259|consensus
Probab=27.23 E-value=55 Score=30.78 Aligned_cols=79 Identities=18% Similarity=0.317 Sum_probs=45.9
Q ss_pred CCCCCCCCcc-ccccccceeeecccchhhHHHhhhHhhhhccccCCCCCCCcc-------cccchhhcccccccCCCCCc
Q psy7288 270 LGPLPPGWEQ-ARTAEGQVYYLKGVLFMYTRLQAGLARALAQVPIGTPISAEQ-------LAYEDHIHRQHWEEGHIDYL 341 (518)
Q Consensus 270 ~~~l~~gwe~-a~t~~g~~y~~~~~~~~~~~~~~~~a~~~sq~~i~~~~~~~~-------~~~ee~~rr~~WE~G~iDYm 341 (518)
...||++|+. .-.+.|..||.|+.+.-.+ |+.....+.+......- .+.+ .....--|+..|-+-+|+-.
T Consensus 4 ~~~LP~~Wekr~Srs~gr~YyfN~~T~~Sq-We~P~~t~~~~~~~~~~-~p~~Vr~sHlLVKH~~SRrpsSwr~~~it~s 81 (163)
T KOG3259|consen 4 EEKLPPGWEKRMSRSSGRPYYFNTETNESQ-WERPSGTSKSGGKIGQG-EPARVRCSHLLVKHKGSRRPSSWRSENITRS 81 (163)
T ss_pred cccCCchhheeccccCCCcceeccccchhh-ccCCCccccccccccCC-CccceeEEEEEEccccCCCCcccccccchhh
Confidence 3578999996 4456899999999876543 32221111111111110 0110 11222335778999999999
Q ss_pred CchhhHHHH
Q psy7288 342 GKDSWDNIW 350 (518)
Q Consensus 342 G~dsf~nIq 350 (518)
-.++++-++
T Consensus 82 keeA~~llk 90 (163)
T KOG3259|consen 82 KEEALDLLK 90 (163)
T ss_pred HHHHHHHHH
Confidence 888887665
No 104
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional
Probab=26.70 E-value=3.4e+02 Score=30.87 Aligned_cols=19 Identities=21% Similarity=0.315 Sum_probs=9.3
Q ss_pred CeEEEec-CCeEEcCCChhh
Q psy7288 99 SKCVFLD-ADVLIVQNCDEL 117 (518)
Q Consensus 99 dKVVYLD-aD~LVl~nIDeL 117 (518)
.|||+|| +|.|-...++.|
T Consensus 121 ~kVvIIDEa~~L~~~a~naL 140 (585)
T PRK14950 121 YKVYIIDEVHMLSTAAFNAL 140 (585)
T ss_pred eEEEEEeChHhCCHHHHHHH
Confidence 4666666 454443333444
No 105
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=26.33 E-value=3.1e+02 Score=25.54 Aligned_cols=41 Identities=12% Similarity=-0.047 Sum_probs=23.2
Q ss_pred EecChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Q psy7288 12 LATNDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELL 55 (518)
Q Consensus 12 l~tnd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~ 55 (518)
-+.|+. ..+.-++.||.+....+. +++++++-++...+.++
T Consensus 4 p~~Ne~--~~l~~~l~sl~~~~~~~e-Iivvdd~S~D~t~~~~~ 44 (191)
T cd06436 4 PCLNEE--AVIQRTLASLLRNKPNFL-VLVIDDASDDDTAGIVR 44 (191)
T ss_pred eccccH--HHHHHHHHHHHhCCCCeE-EEEEECCCCcCHHHHHh
Confidence 345554 234455677776553433 44556666666666665
No 106
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=26.03 E-value=2.5e+02 Score=26.52 Aligned_cols=21 Identities=14% Similarity=0.264 Sum_probs=16.6
Q ss_pred CcCeEEEecCCeEEcCC-Chhh
Q psy7288 97 QYSKCVFLDADVLIVQN-CDEL 117 (518)
Q Consensus 97 eydKVVYLDaD~LVl~n-IDeL 117 (518)
.++-|++||+|+++-.+ |++|
T Consensus 75 ~~d~v~~lD~D~~~~~~~l~~l 96 (237)
T cd02526 75 GADYVLLFDQDSVPPPDMVEKL 96 (237)
T ss_pred CCCEEEEECCCCCcCHhHHHHH
Confidence 68999999999998654 3455
No 107
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=24.61 E-value=2.1e+02 Score=29.56 Aligned_cols=20 Identities=10% Similarity=0.154 Sum_probs=18.3
Q ss_pred cCcCeEEEecCCeEEcCCCh
Q psy7288 96 TQYSKCVFLDADVLIVQNCD 115 (518)
Q Consensus 96 ~eydKVVYLDaD~LVl~nID 115 (518)
-++|=+.++|+|+++.+++.
T Consensus 122 ~e~DYlF~~dvd~~F~~~ig 141 (271)
T cd02515 122 HEVDYLFCMDVDMVFQGPFG 141 (271)
T ss_pred ccCCEEEEeeCCceEeecCC
Confidence 48999999999999999985
No 108
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=23.32 E-value=66 Score=30.42 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=13.1
Q ss_pred hhhhccCcCeEEEecCCeEEcC
Q psy7288 91 HAWRLTQYSKCVFLDADVLIVQ 112 (518)
Q Consensus 91 ~~w~L~eydKVVYLDaD~LVl~ 112 (518)
+......++-|++||+|+++-.
T Consensus 80 ~~~~~~~~d~i~~lD~D~~~~p 101 (228)
T PF13641_consen 80 EALAAARGDYILFLDDDTVLDP 101 (228)
T ss_dssp HHHHH---SEEEEE-SSEEE-C
T ss_pred HHHHhcCCCEEEEECCCcEECH
Confidence 3344456999999999999843
No 109
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=22.80 E-value=2.6e+02 Score=28.43 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=57.8
Q ss_pred ChhhHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHhc-CCeEEEEeeeCCCchhhhcccCCCchhhhhHhHhhh
Q psy7288 15 NDSYALGALVVANSLKRVNTVHDLAILITPGVTLAMKNELLKV-FNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAW 93 (518)
Q Consensus 15 nd~Yl~ga~VL~~SLr~~~s~~~lvvLvt~~vs~~~r~~L~~~-~~~v~~V~~l~~~d~~~l~~~~rp~~~~tftKL~~w 93 (518)
+-+....+...+.||.+.......+++++.+-++...+.++.. +..++.|. .. .|+. ++..+......
T Consensus 11 ~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~---~~--~NlG------~agg~n~g~~~ 79 (305)
T COG1216 11 TYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIE---NG--ENLG------FAGGFNRGIKY 79 (305)
T ss_pred ecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEE---cC--CCcc------chhhhhHHHHH
Confidence 4445556667777888776555555567777777778888876 45454433 22 1332 23344444444
Q ss_pred hccCcC-eEEEecCCeEEc-CCChhhhCC
Q psy7288 94 RLTQYS-KCVFLDADVLIV-QNCDELFDR 120 (518)
Q Consensus 94 ~L~eyd-KVVYLDaD~LVl-~nIDeLF~~ 120 (518)
.+.+.+ -+++|+-|+++- ..|.+|.+.
T Consensus 80 a~~~~~~~~l~LN~D~~~~~~~l~~ll~~ 108 (305)
T COG1216 80 ALAKGDDYVLLLNPDTVVEPDLLEELLKA 108 (305)
T ss_pred HhcCCCcEEEEEcCCeeeChhHHHHHHHH
Confidence 455534 699999997774 456677653
No 110
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=21.05 E-value=1.8e+02 Score=27.35 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=19.9
Q ss_pred HhhhhccCcCeEEEecCCeEEcCC-ChhhhC
Q psy7288 90 IHAWRLTQYSKCVFLDADVLIVQN-CDELFD 119 (518)
Q Consensus 90 L~~w~L~eydKVVYLDaD~LVl~n-IDeLF~ 119 (518)
...+.....+-|++||+|..+..+ +..|.+
T Consensus 75 ~~g~~~a~gd~i~~ld~D~~~~~~~l~~l~~ 105 (211)
T cd04188 75 RAGMLAARGDYILFADADLATPFEELEKLEE 105 (211)
T ss_pred HHHHHHhcCCEEEEEeCCCCCCHHHHHHHHH
Confidence 344555567899999999876543 444444
No 111
>PF07462 MSP1_C: Merozoite surface protein 1 (MSP1) C-terminus; InterPro: IPR010901 This entry represents the C-terminal region of merozoite surface protein 1 (MSP1), which is found in a number of Plasmodium species. MSP-1 is a 200 kDa protein expressed on the surface of the Plasmodium vivax merozoite. MSP-1 of Plasmodium species is synthesised as a high-molecular-weight precursor and then processed into several fragments. At the time of red cell invasion by the merozoite, only the 19 kDa C-terminal fragment (MSP-119), which contains two epidermal growth factor-like domains, remains on the surface. Antibodies against MSP-119 inhibit merozoite entry into red cells, and immunisation with MSP-119 protects monkeys from challenging infections. Hence, MSP-119 is considered a promising vaccine candidate [].; GO: 0009405 pathogenesis, 0016020 membrane
Probab=20.32 E-value=2.3e+02 Score=32.00 Aligned_cols=11 Identities=45% Similarity=0.715 Sum_probs=5.3
Q ss_pred CCcCchhhHHH
Q psy7288 339 DYLGKDSWDNI 349 (518)
Q Consensus 339 DYmG~dsf~nI 349 (518)
+|.|.|-=+||
T Consensus 234 ~YtG~~~~~n~ 244 (574)
T PF07462_consen 234 KYTGNDHAKNI 244 (574)
T ss_pred CCCCCChhhhH
Confidence 45555444444
Done!