Query psy7291
Match_columns 158
No_of_seqs 173 out of 1433
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 22:58:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_B PDHE1-B, pyruvate dehyd 100.0 2.4E-28 8.1E-33 197.1 13.6 140 1-155 156-296 (341)
2 1w85_B Pyruvate dehydrogenase 100.0 4.5E-28 1.6E-32 194.2 14.4 137 1-155 144-280 (324)
3 1umd_B E1-beta, 2-OXO acid deh 100.0 8.6E-28 2.9E-32 192.5 14.9 137 1-155 145-281 (324)
4 2bfd_B 2-oxoisovalerate dehydr 100.0 7.7E-28 2.6E-32 194.2 12.4 137 1-155 162-299 (342)
5 1ik6_A Pyruvate dehydrogenase; 99.9 1.1E-26 3.8E-31 189.1 11.7 134 1-155 192-325 (369)
6 1qs0_B 2-oxoisovalerate dehydr 99.9 2.9E-26 9.8E-31 184.6 13.1 137 1-155 146-295 (338)
7 3mos_A Transketolase, TK; thia 99.9 8.5E-26 2.9E-30 194.2 15.0 133 1-155 443-578 (616)
8 2o1x_A 1-deoxy-D-xylulose-5-ph 99.9 1.3E-23 4.5E-28 181.1 13.4 131 1-156 451-581 (629)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 99.9 1.8E-23 6.2E-28 180.0 13.0 130 1-156 448-578 (621)
10 2yic_A 2-oxoglutarate decarbox 99.8 2E-20 6.8E-25 165.6 10.0 136 1-154 680-828 (868)
11 2xt6_A 2-oxoglutarate decarbox 99.8 3E-20 1E-24 167.9 10.7 136 1-154 925-1073(1113)
12 2e6k_A Transketolase; structur 99.8 2.4E-20 8.3E-25 161.3 8.3 125 1-147 485-614 (651)
13 3rim_A Transketolase, TK; TPP, 99.8 8.7E-20 3E-24 158.5 11.2 119 1-142 520-654 (700)
14 1gpu_A Transketolase; transfer 99.8 6.7E-20 2.3E-24 159.2 10.1 123 1-147 498-627 (680)
15 3m49_A Transketolase; alpha-be 99.8 8.4E-20 2.9E-24 158.5 10.6 122 1-141 515-645 (690)
16 1itz_A Transketolase; calvin c 99.8 1.4E-19 4.9E-24 157.0 11.9 126 1-147 503-636 (675)
17 3l84_A Transketolase; TKT, str 99.8 1.4E-19 4.8E-24 155.9 11.4 122 1-145 470-594 (632)
18 2r8o_A Transketolase 1, TK 1; 99.8 1.2E-19 4.1E-24 157.4 9.2 128 1-147 490-623 (669)
19 1r9j_A Transketolase; domains, 99.8 1.1E-19 3.8E-24 157.6 8.8 122 1-147 490-618 (673)
20 2jgd_A 2-oxoglutarate dehydrog 99.8 2.8E-19 9.7E-24 159.1 11.0 138 1-156 748-894 (933)
21 3ju3_A Probable 2-oxoacid ferr 99.8 4E-19 1.4E-23 123.1 9.1 76 75-151 12-87 (118)
22 3uk1_A Transketolase; structur 99.8 2.3E-19 7.7E-24 156.2 9.5 128 1-147 536-670 (711)
23 1yd7_A 2-keto acid:ferredoxin 99.8 9.5E-20 3.3E-24 149.4 1.4 82 70-153 285-366 (395)
24 3kom_A Transketolase; rossmann 99.7 6.3E-18 2.1E-22 146.3 8.7 123 1-145 491-620 (663)
25 2qtc_A Pyruvate dehydrogenase 99.5 1.7E-15 5.7E-20 134.5 4.2 131 1-151 657-815 (886)
26 3ahc_A Phosphoketolase, xylulo 99.5 8.7E-15 3E-19 128.6 2.2 136 1-154 595-743 (845)
27 2c42_A Pyruvate-ferredoxin oxi 99.5 5.9E-13 2E-17 121.7 13.6 83 70-152 261-348 (1231)
28 2lqo_A Putative glutaredoxin R 90.2 0.7 2.4E-05 29.4 5.4 73 77-154 4-82 (92)
29 3ipz_A Monothiol glutaredoxin- 86.1 1.8 6.1E-05 28.1 5.5 68 76-145 17-89 (109)
30 2wci_A Glutaredoxin-4; redox-a 84.6 1.5 5.1E-05 30.0 4.7 67 76-144 34-105 (135)
31 3rpe_A MDAB, modulator of drug 82.7 12 0.00041 27.5 9.3 58 91-151 49-106 (218)
32 4dik_A Flavoprotein; TM0755, e 80.7 9.3 0.00032 30.8 8.7 73 78-151 266-342 (410)
33 2a5l_A Trp repressor binding p 80.2 7.3 0.00025 27.3 7.2 67 85-153 17-96 (200)
34 3zyw_A Glutaredoxin-3; metal b 80.2 3.6 0.00012 26.8 5.1 68 76-145 15-87 (111)
35 2q62_A ARSH; alpha/beta, flavo 79.6 8.9 0.0003 28.7 7.7 63 89-153 52-123 (247)
36 2vzf_A NADH-dependent FMN redu 79.4 6.5 0.00022 27.9 6.7 66 87-153 18-94 (197)
37 1aba_A Glutaredoxin; electron 78.1 5.4 0.00018 24.2 5.2 60 87-146 13-82 (87)
38 1wik_A Thioredoxin-like protei 77.6 2.7 9.2E-05 27.0 3.8 67 76-144 14-85 (109)
39 3u7r_A NADPH-dependent FMN red 76.6 8.6 0.0003 27.6 6.7 65 86-151 16-90 (190)
40 3l78_A Regulatory protein SPX; 75.9 7.7 0.00026 25.6 5.8 42 85-127 7-48 (120)
41 3l4e_A Uncharacterized peptida 75.8 11 0.00037 27.4 7.0 70 76-154 27-100 (206)
42 3f2v_A General stress protein 75.6 14 0.00049 26.4 7.6 59 93-152 21-82 (192)
43 1cfz_A Hydrogenase 2 maturatio 75.5 6.9 0.00024 27.4 5.7 56 78-137 2-64 (162)
44 3fz4_A Putative arsenate reduc 74.7 6.1 0.00021 26.2 5.1 42 86-128 11-52 (120)
45 3kkj_A Amine oxidase, flavin-c 74.3 3.3 0.00011 29.0 3.9 31 77-110 3-33 (336)
46 2wem_A Glutaredoxin-related pr 74.2 14 0.00046 24.3 6.7 76 76-156 19-111 (118)
47 1t0i_A YLR011WP; FMN binding p 74.0 17 0.00058 25.3 7.6 68 85-153 14-109 (191)
48 1sqs_A Conserved hypothetical 73.8 12 0.00041 27.4 7.0 67 86-153 16-104 (242)
49 2amj_A Modulator of drug activ 73.2 16 0.00056 26.1 7.5 59 91-152 36-94 (204)
50 1rw1_A Conserved hypothetical 73.1 7.4 0.00025 25.3 5.1 40 86-126 8-47 (114)
51 3gkx_A Putative ARSC family re 73.1 7.1 0.00024 25.8 5.1 43 85-128 11-53 (120)
52 3rdw_A Putative arsenate reduc 70.9 6.2 0.00021 26.2 4.4 44 85-129 12-55 (121)
53 3fwz_A Inner membrane protein 70.0 21 0.00071 23.6 7.3 32 76-110 7-38 (140)
54 3f6r_A Flavodoxin; FMN binding 69.7 15 0.00051 24.4 6.3 61 85-152 13-76 (148)
55 5nul_A Flavodoxin; electron tr 69.5 11 0.00039 24.7 5.5 29 84-112 9-37 (138)
56 1z3e_A Regulatory protein SPX; 68.9 17 0.00058 24.2 6.3 42 85-127 8-49 (132)
57 2fzv_A Putative arsenical resi 68.6 15 0.00051 28.2 6.6 63 89-152 76-147 (279)
58 3q2o_A Phosphoribosylaminoimid 68.3 26 0.0009 27.4 8.3 57 76-136 14-83 (389)
59 3hly_A Flavodoxin-like domain; 67.5 18 0.00063 24.7 6.5 51 85-138 12-62 (161)
60 3ic4_A Glutaredoxin (GRX-1); s 67.4 6.9 0.00024 23.7 3.8 72 78-151 13-90 (92)
61 2kok_A Arsenate reductase; bru 67.0 8.4 0.00029 25.3 4.4 49 79-129 7-55 (120)
62 1ydg_A Trp repressor binding p 66.6 12 0.00042 26.5 5.6 68 85-153 18-103 (211)
63 3f0i_A Arsenate reductase; str 65.8 7.3 0.00025 25.7 3.9 43 85-128 11-53 (119)
64 3fni_A Putative diflavin flavo 65.2 17 0.00058 24.9 5.9 55 79-135 6-64 (159)
65 2fz5_A Flavodoxin; alpha/beta 65.0 23 0.00079 22.9 6.3 28 85-112 11-38 (137)
66 3lyu_A Putative hydrogenase; t 64.3 12 0.00041 25.2 4.8 37 76-112 18-54 (142)
67 3gx8_A Monothiol glutaredoxin- 64.2 8.6 0.00029 25.3 4.0 65 76-145 15-90 (121)
68 3nzn_A Glutaredoxin; structura 63.8 9.6 0.00033 23.9 4.1 73 77-150 22-100 (103)
69 3pu6_A Uncharacterized protein 63.7 17 0.00058 25.2 5.6 56 78-137 4-65 (157)
70 3llv_A Exopolyphosphatase-rela 63.6 28 0.00095 22.7 7.0 32 76-110 6-37 (141)
71 2wul_A Glutaredoxin related pr 62.0 22 0.00074 23.6 5.6 74 76-156 19-111 (118)
72 1t1v_A SH3BGRL3, SH3 domain-bi 61.5 16 0.00054 22.4 4.7 65 78-145 3-76 (93)
73 1ycg_A Nitric oxide reductase; 60.6 23 0.00079 27.5 6.6 58 78-138 252-313 (398)
74 1id1_A Putative potassium chan 60.4 14 0.00049 24.7 4.7 33 76-111 3-35 (153)
75 1e5d_A Rubredoxin\:oxygen oxid 59.8 46 0.0016 25.8 8.2 70 78-151 253-326 (402)
76 2ark_A Flavodoxin; FMN, struct 59.7 27 0.00092 24.3 6.2 60 85-152 16-76 (188)
77 3jx9_A Putative phosphoheptose 58.6 33 0.0011 24.2 6.4 74 76-151 78-154 (170)
78 2d59_A Hypothetical protein PH 58.6 23 0.00079 23.9 5.5 44 113-156 7-50 (144)
79 1s3c_A Arsenate reductase; ARS 58.4 16 0.00053 24.9 4.5 41 86-127 10-50 (141)
80 2ohh_A Type A flavoprotein FPR 57.7 27 0.00094 27.2 6.6 70 78-151 257-330 (404)
81 2ab1_A Hypothetical protein; H 57.4 5.2 0.00018 26.8 1.9 35 76-110 61-97 (122)
82 2e85_A Hydrogenase 3 maturatio 57.0 41 0.0014 23.2 6.7 56 78-137 5-67 (159)
83 1v95_A Nuclear receptor coacti 56.6 43 0.0015 22.6 6.6 59 77-136 9-69 (130)
84 3pp8_A Glyoxylate/hydroxypyruv 56.6 52 0.0018 25.4 7.8 56 74-133 137-199 (315)
85 2zki_A 199AA long hypothetical 56.6 30 0.001 24.1 6.0 68 84-153 14-95 (199)
86 2q9u_A A-type flavoprotein; fl 56.5 57 0.0019 25.5 8.3 70 79-152 258-331 (414)
87 3mcu_A Dipicolinate synthase, 55.6 9.2 0.00031 28.1 3.1 33 76-108 5-39 (207)
88 2bfw_A GLGA glycogen synthase; 55.4 34 0.0012 23.3 6.2 41 109-152 96-137 (200)
89 2yan_A Glutaredoxin-3; oxidore 54.9 22 0.00076 22.2 4.7 68 76-145 16-88 (105)
90 2x5n_A SPRPN10, 26S proteasome 54.6 43 0.0015 23.7 6.6 59 78-138 108-174 (192)
91 3b6i_A Flavoprotein WRBA; flav 54.5 29 0.001 24.0 5.7 67 84-153 12-93 (198)
92 3isl_A Purine catabolism prote 54.5 70 0.0024 24.4 8.5 58 99-156 106-167 (416)
93 2g1u_A Hypothetical protein TM 54.5 19 0.00064 24.2 4.5 32 76-110 19-50 (155)
94 1hsk_A UDP-N-acetylenolpyruvoy 54.4 10 0.00035 29.6 3.4 27 1-27 52-78 (326)
95 3fvw_A Putative NAD(P)H-depend 54.2 37 0.0013 23.9 6.2 60 90-151 21-90 (192)
96 1rtt_A Conserved hypothetical 53.6 17 0.00058 25.4 4.3 56 95-152 30-96 (193)
97 1fov_A Glutaredoxin 3, GRX3; a 53.0 31 0.0011 19.9 5.4 71 79-153 3-74 (82)
98 3tx1_A UDP-N-acetylenolpyruvoy 52.3 11 0.00039 29.3 3.4 27 1-27 58-84 (322)
99 3i16_A Aluminum resistance pro 52.2 20 0.00068 28.9 4.9 38 116-153 162-208 (427)
100 4hs4_A Chromate reductase; tri 52.2 48 0.0016 23.6 6.6 64 87-151 21-96 (199)
101 3hg7_A D-isomer specific 2-hyd 51.8 46 0.0016 25.9 6.8 56 74-133 138-200 (324)
102 1f4p_A Flavodoxin; electron tr 51.6 26 0.00089 23.1 4.8 28 86-113 13-40 (147)
103 2fvt_A Conserved hypothetical 51.5 6.8 0.00023 26.8 1.7 36 76-111 67-103 (135)
104 3hr4_A Nitric oxide synthase, 50.6 22 0.00075 26.2 4.5 59 76-141 39-100 (219)
105 3c85_A Putative glutathione-re 50.3 18 0.0006 25.0 3.9 32 76-110 39-71 (183)
106 3k5i_A Phosphoribosyl-aminoimi 50.1 92 0.0031 24.5 8.5 55 76-135 24-93 (403)
107 4e4t_A Phosphoribosylaminoimid 50.1 40 0.0014 26.9 6.4 56 76-135 35-103 (419)
108 3orq_A N5-carboxyaminoimidazol 49.0 48 0.0016 25.9 6.7 57 76-136 12-81 (377)
109 3evt_A Phosphoglycerate dehydr 48.8 41 0.0014 26.1 6.1 57 73-133 134-197 (324)
110 1t5b_A Acyl carrier protein ph 48.7 63 0.0021 22.2 7.2 64 88-152 19-110 (201)
111 1edz_A 5,10-methylenetetrahydr 48.7 40 0.0014 26.3 6.0 58 74-133 175-251 (320)
112 2hze_A Glutaredoxin-1; thiored 48.7 42 0.0015 21.2 5.3 76 77-155 19-109 (114)
113 3hh1_A Tetrapyrrole methylase 48.3 15 0.00052 23.8 3.1 33 76-108 79-114 (117)
114 4ici_A Putative flavoprotein; 48.1 20 0.00069 24.9 3.9 74 80-155 16-114 (171)
115 3g8r_A Probable spore coat pol 48.0 1E+02 0.0035 24.4 8.6 63 77-139 135-204 (350)
116 2fi9_A Outer membrane protein; 47.8 7.4 0.00025 26.2 1.4 35 76-110 68-103 (128)
117 3oz2_A Digeranylgeranylglycero 47.4 18 0.0006 27.6 3.8 31 77-110 5-35 (397)
118 3jzl_A Putative cystathionine 47.3 27 0.00091 27.9 4.9 56 98-153 129-191 (409)
119 3lrx_A Putative hydrogenase; a 47.3 24 0.00082 24.1 4.1 49 76-124 23-72 (158)
120 3nnk_A Ureidoglycine-glyoxylat 47.0 57 0.002 24.9 6.8 56 100-155 109-168 (411)
121 3klb_A Putative flavoprotein; 46.9 19 0.00065 24.7 3.5 74 80-155 7-105 (162)
122 1ijb_A VON willebrand factor; 46.5 39 0.0013 23.7 5.3 59 78-138 118-182 (202)
123 4hvk_A Probable cysteine desul 46.3 44 0.0015 25.1 5.9 59 97-155 107-168 (382)
124 3ri6_A O-acetylhomoserine sulf 45.8 1.1E+02 0.0036 24.4 8.3 52 100-156 144-198 (430)
125 1lss_A TRK system potassium up 45.4 29 0.001 22.2 4.2 32 76-110 4-35 (140)
126 4a5l_A Thioredoxin reductase; 45.2 62 0.0021 23.8 6.5 46 76-124 152-197 (314)
127 3l4b_C TRKA K+ channel protien 45.0 25 0.00086 25.0 4.1 30 78-110 2-31 (218)
128 2khp_A Glutaredoxin; thioredox 44.4 42 0.0014 20.0 4.6 65 78-145 7-72 (92)
129 2hpv_A FMN-dependent NADH-azor 44.3 71 0.0024 22.3 6.4 63 89-152 21-118 (208)
130 3qmx_A Glutaredoxin A, glutare 44.1 23 0.0008 22.1 3.4 67 76-145 15-83 (99)
131 1uxy_A MURB, uridine diphospho 44.0 17 0.00057 28.6 3.2 27 1-27 18-44 (340)
132 3tem_A Ribosyldihydronicotinam 43.8 49 0.0017 24.1 5.6 64 88-152 18-116 (228)
133 3lqk_A Dipicolinate synthase s 43.2 17 0.00058 26.4 2.9 41 76-116 7-53 (201)
134 2ct6_A SH3 domain-binding glut 43.0 51 0.0017 20.9 5.0 62 78-145 9-88 (111)
135 4bby_A Alkyldihydroxyacetoneph 42.7 18 0.00062 30.9 3.4 27 1-27 209-235 (658)
136 2cuk_A Glycerate dehydrogenase 42.7 48 0.0017 25.4 5.6 57 73-133 141-199 (311)
137 3qhp_A Type 1 capsular polysac 42.7 69 0.0024 20.9 8.1 64 77-152 33-96 (166)
138 3dfz_A SIRC, precorrin-2 dehyd 42.6 69 0.0024 23.5 6.2 33 76-111 31-63 (223)
139 3rja_A Carbohydrate oxidase; p 42.4 19 0.00067 29.5 3.4 29 1-29 40-68 (473)
140 3hvy_A Cystathionine beta-lyas 42.3 36 0.0012 27.4 5.0 21 116-136 162-184 (427)
141 3gdw_A Sigma-54 interaction do 41.9 77 0.0026 21.3 6.5 59 77-136 5-72 (139)
142 2gm2_A Conserved hypothetical 41.9 7.6 0.00026 26.4 0.8 35 76-110 64-99 (132)
143 2rir_A Dipicolinate synthase, 41.6 42 0.0014 25.3 5.1 35 74-111 155-189 (300)
144 3cpk_A Uncharacterized protein 41.6 12 0.0004 26.2 1.7 35 76-110 88-123 (150)
145 2hmt_A YUAA protein; RCK, KTN, 41.6 37 0.0013 21.7 4.3 32 76-110 6-37 (144)
146 3l9w_A Glutathione-regulated p 41.1 34 0.0012 27.5 4.6 33 76-111 4-36 (413)
147 4dgs_A Dehydrogenase; structur 41.1 54 0.0018 25.7 5.7 57 74-133 169-228 (340)
148 3fw9_A Reticuline oxidase; BI- 40.7 21 0.00072 29.5 3.4 29 1-29 49-77 (495)
149 1n3y_A Integrin alpha-X; alpha 40.6 68 0.0023 21.9 5.8 75 78-152 113-194 (198)
150 2gfq_A UPF0204 protein PH0006; 40.6 1.2E+02 0.0041 23.4 7.5 79 77-156 210-291 (298)
151 3pm9_A Putative oxidoreductase 40.4 17 0.00058 29.9 2.8 27 1-27 55-81 (476)
152 3hhe_A Ribose-5-phosphate isom 40.1 44 0.0015 25.3 4.8 33 76-108 41-73 (255)
153 3rhb_A ATGRXC5, glutaredoxin-C 39.8 67 0.0023 20.0 5.3 67 77-145 19-89 (113)
154 3ha2_A NADPH-quinone reductase 39.6 95 0.0032 21.7 6.9 48 102-152 28-75 (177)
155 1atz_A VON willebrand factor; 39.5 24 0.00081 24.4 3.1 57 79-137 112-170 (189)
156 3kgw_A Alanine-glyoxylate amin 39.4 1.2E+02 0.004 22.8 7.4 56 100-155 119-178 (393)
157 3r6w_A FMN-dependent NADH-azor 39.1 99 0.0034 21.7 7.3 63 89-152 20-111 (212)
158 3pop_A GILR oxidase; FAD bindi 38.9 23 0.00079 29.3 3.4 29 1-29 38-66 (501)
159 3od1_A ATP phosphoribosyltrans 38.7 1.3E+02 0.0045 23.9 7.8 59 78-142 338-397 (400)
160 2xvy_A Chelatase, putative; me 38.4 75 0.0026 23.4 6.0 74 77-150 10-101 (269)
161 3ht4_A Aluminum resistance pro 38.3 32 0.0011 27.6 4.1 36 101-136 138-173 (431)
162 2y3s_A TAML; oxidoreductase; H 38.2 25 0.00084 29.3 3.4 28 1-28 62-89 (530)
163 3tnl_A Shikimate dehydrogenase 38.1 91 0.0031 24.1 6.5 34 75-111 153-187 (315)
164 4gi5_A Quinone reductase; prot 37.6 86 0.0029 23.8 6.2 62 89-151 40-135 (280)
165 3n2n_F Anthrax toxin receptor 37.3 18 0.00063 24.6 2.2 57 77-136 108-168 (185)
166 1xky_A Dihydrodipicolinate syn 37.2 99 0.0034 23.5 6.6 78 76-153 80-164 (301)
167 1qgn_A Protein (cystathionine 37.1 93 0.0032 25.0 6.7 40 117-156 188-231 (445)
168 3ngx_A Bifunctional protein fo 37.0 46 0.0016 25.5 4.5 51 74-132 148-198 (276)
169 3tsh_A Pollen allergen PHL P 4 36.9 26 0.00089 28.8 3.4 28 1-28 56-83 (500)
170 2bmv_A Flavodoxin; electron tr 36.8 80 0.0027 21.1 5.5 31 80-111 4-35 (164)
171 3d0c_A Dihydrodipicolinate syn 36.3 1.2E+02 0.0041 23.2 7.0 75 76-153 80-159 (314)
172 4gcm_A TRXR, thioredoxin reduc 36.2 41 0.0014 25.0 4.2 32 76-110 6-37 (312)
173 2ywl_A Thioredoxin reductase r 36.0 49 0.0017 22.3 4.3 31 78-111 3-33 (180)
174 1sc6_A PGDH, D-3-phosphoglycer 36.0 54 0.0019 26.3 5.1 58 73-133 142-203 (404)
175 1f0x_A DLDH, D-lactate dehydro 35.8 27 0.00094 29.5 3.4 27 1-27 49-75 (571)
176 1e8g_A Vanillyl-alcohol oxidas 35.8 21 0.00072 29.9 2.7 28 1-28 74-101 (560)
177 3ulk_A Ketol-acid reductoisome 35.7 35 0.0012 28.3 3.9 31 74-107 35-65 (491)
178 3lvm_A Cysteine desulfurase; s 35.7 89 0.0031 24.0 6.3 58 98-155 133-193 (423)
179 3le1_A Phosphotransferase syst 35.7 64 0.0022 19.9 4.4 28 76-103 58-85 (88)
180 3gx1_A LIN1832 protein; APC633 35.6 95 0.0033 20.5 6.5 59 77-136 5-70 (130)
181 3e96_A Dihydrodipicolinate syn 35.6 94 0.0032 23.8 6.3 75 76-153 80-159 (316)
182 1wvf_A 4-cresol dehydrogenase 35.5 22 0.00075 29.4 2.7 28 1-28 60-87 (520)
183 3msz_A Glutaredoxin 1; alpha-b 35.5 66 0.0022 18.6 4.6 65 79-145 6-77 (89)
184 1kte_A Thioltransferase; redox 35.4 71 0.0024 19.3 4.7 65 77-144 12-83 (105)
185 3lcm_A SMU.1420, putative oxid 35.4 96 0.0033 21.7 5.9 62 89-152 18-97 (196)
186 4hqf_A Thrombospondin-related 35.2 70 0.0024 23.6 5.4 59 78-138 131-196 (281)
187 1ykg_A SIR-FP, sulfite reducta 35.2 46 0.0016 22.7 4.0 33 80-112 12-48 (167)
188 3k5p_A D-3-phosphoglycerate de 35.0 61 0.0021 26.2 5.2 57 73-132 153-213 (416)
189 1zr6_A Glucooligosaccharide ox 35.0 23 0.00078 29.2 2.7 29 1-29 46-74 (503)
190 3a5f_A Dihydrodipicolinate syn 34.9 1E+02 0.0035 23.3 6.3 78 76-153 69-153 (291)
191 1efv_B Electron transfer flavo 34.6 1.4E+02 0.0048 22.2 7.6 72 78-152 60-143 (255)
192 2bvf_A 6-hydroxy-D-nicotine ox 34.3 24 0.00082 28.6 2.7 28 1-28 42-69 (459)
193 2ehh_A DHDPS, dihydrodipicolin 34.2 1.5E+02 0.0051 22.4 7.2 77 76-152 68-151 (294)
194 1vl0_A DTDP-4-dehydrorhamnose 34.2 91 0.0031 22.7 5.9 54 79-132 13-68 (292)
195 4hqo_A Sporozoite surface prot 34.2 58 0.002 24.0 4.7 57 78-136 128-191 (266)
196 3ax6_A Phosphoribosylaminoimid 34.1 1.6E+02 0.0054 22.6 9.0 53 78-133 3-68 (380)
197 2xwp_A Sirohydrochlorin cobalt 34.0 1.4E+02 0.0048 22.0 7.9 73 78-151 4-97 (264)
198 1r7h_A NRDH-redoxin; thioredox 33.9 63 0.0022 18.0 4.7 27 86-112 9-35 (75)
199 1kyq_A Met8P, siroheme biosynt 33.9 60 0.0021 24.6 4.8 34 76-112 13-46 (274)
200 3svl_A Protein YIEF; E. coli C 33.9 39 0.0013 23.9 3.6 64 87-151 19-95 (193)
201 3p2o_A Bifunctional protein fo 33.7 66 0.0023 24.7 5.0 35 75-111 159-193 (285)
202 3okp_A GDP-mannose-dependent a 33.6 1.5E+02 0.0051 22.2 7.3 74 79-152 199-301 (394)
203 2xws_A Sirohydrochlorin cobalt 33.6 79 0.0027 20.4 4.9 73 78-152 5-85 (133)
204 1jzt_A Hypothetical 27.5 kDa p 33.5 1E+02 0.0034 22.9 5.9 33 79-111 62-94 (246)
205 2ipi_A Aclacinomycin oxidoredu 33.5 24 0.00083 29.2 2.7 29 1-29 59-87 (521)
206 3vte_A Tetrahydrocannabinolic 33.5 25 0.00085 29.3 2.7 29 1-29 57-85 (518)
207 2wdx_A Putative hexose oxidase 33.5 24 0.00083 29.3 2.7 28 1-28 61-88 (523)
208 1d4a_A DT-diaphorase, quinone 33.2 1.2E+02 0.0039 22.6 6.3 63 89-152 20-117 (273)
209 2ejb_A Probable aromatic acid 33.0 70 0.0024 22.8 4.8 31 78-108 3-34 (189)
210 2bkw_A Alanine-glyoxylate amin 32.9 1.4E+02 0.0048 22.3 6.9 56 99-154 106-166 (385)
211 2vc6_A MOSA, dihydrodipicolina 32.8 1.1E+02 0.0037 23.1 6.1 78 76-153 68-152 (292)
212 3flu_A DHDPS, dihydrodipicolin 32.7 1.3E+02 0.0045 22.7 6.6 78 76-153 75-159 (297)
213 2uuu_A Alkyldihydroxyacetoneph 32.7 26 0.00088 29.6 2.7 27 1-27 141-167 (584)
214 3qze_A DHDPS, dihydrodipicolin 32.6 1.3E+02 0.0045 23.0 6.6 78 76-153 91-175 (314)
215 1xhc_A NADH oxidase /nitrite r 32.6 48 0.0016 25.7 4.2 33 76-112 8-40 (367)
216 4a26_A Putative C-1-tetrahydro 32.5 99 0.0034 23.9 5.8 36 75-112 164-199 (300)
217 1shu_X Anthrax toxin receptor 32.5 95 0.0033 20.7 5.4 57 77-136 105-165 (182)
218 3cpr_A Dihydrodipicolinate syn 32.5 1.6E+02 0.0056 22.3 7.3 78 76-153 84-168 (304)
219 3l07_A Bifunctional protein fo 32.3 74 0.0025 24.4 5.0 50 75-132 160-209 (285)
220 3k1y_A Oxidoreductase; structu 32.1 1.1E+02 0.0038 21.5 5.8 55 97-152 41-109 (191)
221 4b4t_W RPN10, 26S proteasome r 32.1 71 0.0024 24.2 4.9 59 78-137 108-177 (268)
222 1fy2_A Aspartyl dipeptidase; s 32.0 62 0.0021 23.5 4.5 68 76-156 31-102 (229)
223 3vax_A Putative uncharacterize 31.8 91 0.0031 23.6 5.7 56 100-155 131-189 (400)
224 3zqu_A Probable aromatic acid 31.8 77 0.0026 23.0 4.9 33 76-108 4-37 (209)
225 4eb5_A Probable cysteine desul 31.7 93 0.0032 23.3 5.7 58 98-155 108-168 (382)
226 1xdw_A NAD+-dependent (R)-2-hy 31.6 63 0.0021 25.0 4.7 57 74-133 144-204 (331)
227 2aef_A Calcium-gated potassium 31.5 46 0.0016 23.8 3.7 31 76-110 9-39 (234)
228 2obb_A Hypothetical protein; s 31.5 36 0.0012 23.2 2.9 75 77-154 40-116 (142)
229 4a5o_A Bifunctional protein fo 31.5 68 0.0023 24.6 4.7 36 75-112 160-195 (286)
230 3ba1_A HPPR, hydroxyphenylpyru 31.4 1.1E+02 0.0037 23.7 6.0 56 74-133 162-221 (333)
231 2klx_A Glutaredoxin; thioredox 31.4 45 0.0015 19.7 3.1 67 79-151 8-76 (89)
232 3js8_A Cholesterol oxidase; ch 31.4 28 0.00095 29.3 2.7 28 1-28 33-60 (540)
233 3tak_A DHDPS, dihydrodipicolin 31.2 1.1E+02 0.0037 23.1 5.9 46 76-121 69-115 (291)
234 2ht9_A Glutaredoxin-2; thiored 31.1 53 0.0018 22.1 3.7 77 77-156 49-137 (146)
235 3i99_A UDP-N-acetylenolpyruvoy 31.0 16 0.00054 29.1 1.1 27 1-27 34-60 (357)
236 2wkj_A N-acetylneuraminate lya 31.0 1.4E+02 0.0049 22.6 6.6 78 76-153 79-164 (303)
237 2exr_A Cytokinin dehydrogenase 31.0 36 0.0012 28.2 3.3 28 1-28 65-93 (524)
238 2yxg_A DHDPS, dihydrodipicolin 30.9 1.4E+02 0.0049 22.4 6.6 77 76-152 68-151 (289)
239 2r91_A 2-keto-3-deoxy-(6-phosp 30.9 1.2E+02 0.0042 22.7 6.2 57 80-136 67-130 (286)
240 1dxy_A D-2-hydroxyisocaproate 30.9 88 0.003 24.2 5.4 57 74-133 143-203 (333)
241 2dr1_A PH1308 protein, 386AA l 30.9 1.7E+02 0.0057 21.9 8.9 57 100-156 116-177 (386)
242 1o5k_A DHDPS, dihydrodipicolin 30.8 1.1E+02 0.0037 23.3 5.9 77 76-152 80-163 (306)
243 3d3k_A Enhancer of mRNA-decapp 30.7 62 0.0021 24.2 4.4 33 79-111 89-121 (259)
244 1rli_A Trp repressor binding p 30.7 1.2E+02 0.0042 20.3 6.9 57 94-152 22-95 (184)
245 3f0h_A Aminotransferase; RER07 30.6 1.7E+02 0.0057 21.9 8.1 56 100-155 116-174 (376)
246 1xhc_A NADH oxidase /nitrite r 30.6 93 0.0032 24.0 5.6 41 76-119 143-184 (367)
247 3cog_A Cystathionine gamma-lya 30.6 1.7E+02 0.0059 22.7 7.2 39 117-155 140-181 (403)
248 3b4u_A Dihydrodipicolinate syn 30.5 1.3E+02 0.0045 22.7 6.3 74 79-152 74-158 (294)
249 3lyh_A Cobalamin (vitamin B12) 30.4 1.1E+02 0.0037 19.6 6.3 67 77-143 6-77 (126)
250 3dme_A Conserved exported prot 30.3 48 0.0016 24.9 3.8 33 76-111 4-36 (369)
251 2ojp_A DHDPS, dihydrodipicolin 30.3 1E+02 0.0036 23.2 5.7 78 76-153 69-153 (292)
252 1w3i_A EDA, 2-keto-3-deoxy glu 30.2 1.2E+02 0.0042 22.8 6.1 57 80-136 68-131 (293)
253 3k7m_X 6-hydroxy-L-nicotine ox 30.2 51 0.0017 25.7 4.0 30 78-110 3-32 (431)
254 2c5m_A CTP synthase; cytidine 30.1 51 0.0017 25.4 3.7 48 89-136 217-268 (294)
255 3d7n_A Flavodoxin, WRBA-like p 30.0 70 0.0024 22.2 4.4 72 78-153 8-79 (193)
256 2dc1_A L-aspartate dehydrogena 29.9 1.4E+02 0.0049 21.3 6.2 63 76-143 50-115 (236)
257 2nuw_A 2-keto-3-deoxygluconate 29.9 1.3E+02 0.0044 22.7 6.1 57 80-136 68-131 (288)
258 4g2n_A D-isomer specific 2-hyd 29.9 65 0.0022 25.2 4.5 58 73-133 170-233 (345)
259 1v8b_A Adenosylhomocysteinase; 29.7 49 0.0017 27.3 3.9 59 74-135 255-320 (479)
260 1vk8_A Hypothetical protein TM 29.7 97 0.0033 20.0 4.6 36 78-113 19-57 (106)
261 2o8n_A APOA-I binding protein; 29.4 1.1E+02 0.0039 22.9 5.7 32 79-110 83-114 (265)
262 1f6k_A N-acetylneuraminate lya 29.2 1.6E+02 0.0054 22.2 6.5 78 76-153 72-156 (293)
263 2raf_A Putative dinucleotide-b 29.2 56 0.0019 23.1 3.8 31 76-109 19-49 (209)
264 2b0l_A GTP-sensing transcripti 29.1 90 0.0031 19.6 4.4 41 85-126 54-98 (102)
265 2fq6_A Cystathionine beta-lyas 29.0 56 0.0019 25.9 4.0 51 98-153 142-195 (415)
266 3fbs_A Oxidoreductase; structu 28.8 65 0.0022 23.2 4.2 31 77-110 3-33 (297)
267 3qjg_A Epidermin biosynthesis 28.8 51 0.0017 23.3 3.4 33 77-109 6-39 (175)
268 1g63_A Epidermin modifying enz 28.8 51 0.0017 23.4 3.4 31 78-108 4-35 (181)
269 4e5n_A Thermostable phosphite 28.8 38 0.0013 26.3 2.9 35 74-111 143-177 (330)
270 1b0a_A Protein (fold bifunctio 28.7 81 0.0028 24.2 4.7 36 75-112 158-193 (288)
271 3a9l_A Poly-gamma-glutamate hy 28.4 82 0.0028 23.2 4.5 45 114-158 82-137 (216)
272 1ryi_A Glycine oxidase; flavop 28.4 53 0.0018 25.0 3.8 32 77-111 18-49 (382)
273 1yvv_A Amine oxidase, flavin-c 28.4 58 0.002 24.2 3.9 32 77-111 3-34 (336)
274 1p3y_1 MRSD protein; flavoprot 28.4 34 0.0012 24.6 2.4 33 76-108 8-41 (194)
275 3r9u_A Thioredoxin reductase; 28.4 1.7E+02 0.0058 21.1 7.0 49 76-127 147-195 (315)
276 4a5l_A Thioredoxin reductase; 28.4 48 0.0017 24.4 3.4 31 77-110 5-35 (314)
277 2r8w_A AGR_C_1641P; APC7498, d 28.3 1.4E+02 0.0049 23.0 6.2 78 76-153 102-186 (332)
278 3eb2_A Putative dihydrodipicol 28.2 1.1E+02 0.0038 23.2 5.5 78 76-153 72-156 (300)
279 3ndn_A O-succinylhomoserine su 28.1 2.2E+02 0.0074 22.3 8.8 53 99-156 142-197 (414)
280 3f8d_A Thioredoxin reductase ( 28.1 67 0.0023 23.5 4.2 32 77-111 16-47 (323)
281 3d3j_A Enhancer of mRNA-decapp 28.1 71 0.0024 24.6 4.4 33 79-111 136-168 (306)
282 2gqw_A Ferredoxin reductase; f 27.9 1.3E+02 0.0046 23.4 6.1 41 76-119 145-188 (408)
283 2oln_A NIKD protein; flavoprot 27.9 65 0.0022 24.8 4.2 32 77-111 5-36 (397)
284 1vli_A Spore coat polysacchari 27.9 2.3E+02 0.008 22.6 8.5 74 77-151 158-239 (385)
285 3daq_A DHDPS, dihydrodipicolin 27.7 1.3E+02 0.0046 22.6 5.9 78 76-153 70-154 (292)
286 1ego_A Glutaredoxin; electron 27.6 91 0.0031 17.8 5.6 64 86-152 9-80 (85)
287 4fk1_A Putative thioredoxin re 27.4 70 0.0024 23.6 4.2 31 77-110 7-37 (304)
288 3na8_A Putative dihydrodipicol 27.3 1.3E+02 0.0044 23.1 5.7 76 76-151 92-174 (315)
289 2ibo_A Hypothetical protein SP 27.2 1E+02 0.0036 19.7 4.4 35 78-112 6-43 (104)
290 1qp8_A Formate dehydrogenase; 27.2 93 0.0032 23.7 4.9 57 74-133 122-180 (303)
291 1mx3_A CTBP1, C-terminal bindi 27.1 79 0.0027 24.7 4.5 35 74-111 166-200 (347)
292 3cgv_A Geranylgeranyl reductas 27.0 58 0.002 24.8 3.8 33 77-112 5-37 (397)
293 3gvx_A Glycerate dehydrogenase 27.0 87 0.003 23.8 4.7 56 74-133 120-179 (290)
294 3abi_A Putative uncharacterize 26.9 1.6E+02 0.0054 22.7 6.3 72 76-153 77-148 (365)
295 3d64_A Adenosylhomocysteinase; 26.9 58 0.002 27.0 3.8 58 74-134 275-339 (494)
296 1js3_A DDC;, DOPA decarboxylas 26.8 2E+02 0.0067 22.8 7.0 76 78-156 182-266 (486)
297 2wqp_A Polysialic acid capsule 26.7 2.3E+02 0.008 22.2 8.7 73 77-151 148-227 (349)
298 3m5v_A DHDPS, dihydrodipicolin 26.7 2.1E+02 0.0071 21.6 7.3 77 77-153 77-160 (301)
299 1efp_B ETF, protein (electron 26.7 2E+02 0.0067 21.3 9.0 72 78-151 57-139 (252)
300 1jw3_A Conserved hypothetical 26.6 49 0.0017 22.5 2.9 20 76-95 10-29 (140)
301 3dtt_A NADP oxidoreductase; st 26.6 82 0.0028 22.8 4.4 33 76-111 19-51 (245)
302 3nhv_A BH2092 protein; alpha-b 26.6 58 0.002 21.7 3.3 34 76-109 72-105 (144)
303 4hy3_A Phosphoglycerate oxidor 26.6 83 0.0028 24.9 4.6 57 73-133 173-236 (365)
304 1bvy_F Protein (cytochrome P45 26.6 1.3E+02 0.0044 21.1 5.3 65 79-152 23-94 (191)
305 3itj_A Thioredoxin reductase 1 26.5 54 0.0019 24.2 3.4 32 76-110 22-53 (338)
306 2rfg_A Dihydrodipicolinate syn 26.4 1E+02 0.0035 23.4 5.0 78 76-153 68-152 (297)
307 1eg5_A Aminotransferase; PLP-d 26.2 1.6E+02 0.0056 21.9 6.2 58 98-155 109-169 (384)
308 4feh_A Oxidoreductase DPRE1; a 26.2 52 0.0018 27.0 3.4 28 1-28 46-75 (481)
309 2i0k_A Oxidoreductase; MIX alp 26.1 39 0.0013 28.3 2.7 28 1-28 39-66 (561)
310 2huf_A Alanine glyoxylate amin 26.0 2.1E+02 0.0072 21.5 7.4 57 99-155 114-174 (393)
311 2gf3_A MSOX, monomeric sarcosi 25.9 63 0.0021 24.6 3.8 32 77-111 4-35 (389)
312 1leh_A Leucine dehydrogenase; 25.9 1.3E+02 0.0043 23.7 5.6 32 75-109 172-203 (364)
313 1y56_B Sarcosine oxidase; dehy 25.9 66 0.0023 24.5 3.9 34 76-112 5-38 (382)
314 3oj0_A Glutr, glutamyl-tRNA re 25.7 31 0.0011 22.7 1.7 32 76-110 21-52 (144)
315 1mvl_A PPC decarboxylase athal 25.7 65 0.0022 23.4 3.5 32 76-108 19-51 (209)
316 3nix_A Flavoprotein/dehydrogen 25.7 61 0.0021 25.0 3.7 33 77-112 6-38 (421)
317 3cty_A Thioredoxin reductase; 25.4 80 0.0027 23.3 4.2 32 77-111 17-48 (319)
318 3rp8_A Flavoprotein monooxygen 25.4 72 0.0025 24.7 4.1 33 76-111 23-55 (407)
319 4dpp_A DHDPS 2, dihydrodipicol 25.2 2.5E+02 0.0086 22.1 7.4 78 76-153 127-209 (360)
320 1e5e_A MGL, methionine gamma-l 25.1 1.7E+02 0.0058 22.6 6.3 39 117-155 136-178 (404)
321 3si9_A DHDPS, dihydrodipicolin 25.1 1.7E+02 0.0059 22.3 6.1 78 76-153 90-174 (315)
322 3sho_A Transcriptional regulat 24.9 1.1E+02 0.0037 20.8 4.6 34 76-109 39-72 (187)
323 2pv7_A T-protein [includes: ch 24.8 1.8E+02 0.0061 21.7 6.1 31 76-109 21-52 (298)
324 3bed_A PTS system, IIA compone 24.8 1.3E+02 0.0045 19.9 4.9 73 78-152 7-83 (142)
325 2vdc_G Glutamate synthase [NAD 24.8 61 0.0021 26.1 3.6 33 76-111 122-154 (456)
326 4dgk_A Phytoene dehydrogenase; 24.8 71 0.0024 25.4 4.0 31 77-110 2-32 (501)
327 3l7o_A Ribose-5-phosphate isom 24.8 80 0.0027 23.3 3.9 33 76-108 18-51 (225)
328 1ptf_A Histidine-containing ph 24.7 1.3E+02 0.0043 18.5 4.4 25 76-100 58-82 (88)
329 3ibs_A Conserved hypothetical 24.6 1.2E+02 0.004 21.0 4.8 60 77-136 113-197 (218)
330 1w1o_A Cytokinin dehydrogenase 24.5 57 0.002 26.9 3.4 28 1-28 72-102 (534)
331 2zbw_A Thioredoxin reductase; 24.4 85 0.0029 23.3 4.2 32 77-111 6-37 (335)
332 3h8q_A Thioredoxin reductase 3 24.3 1.4E+02 0.0047 18.7 7.2 66 76-145 16-86 (114)
333 3d4o_A Dipicolinate synthase s 24.2 96 0.0033 23.2 4.4 35 74-111 153-187 (293)
334 4a9w_A Monooxygenase; baeyer-v 24.2 71 0.0024 23.7 3.7 32 77-111 4-35 (357)
335 3en0_A Cyanophycinase; serine 24.2 1.2E+02 0.0042 23.1 5.1 58 76-133 56-116 (291)
336 2yq5_A D-isomer specific 2-hyd 24.1 95 0.0032 24.3 4.5 57 74-133 146-206 (343)
337 2ch1_A 3-hydroxykynurenine tra 24.1 2.3E+02 0.0079 21.3 7.4 56 100-155 114-173 (396)
338 2cul_A Glucose-inhibited divis 23.9 99 0.0034 22.0 4.3 33 76-111 3-35 (232)
339 1sph_A Histidine-containing ph 23.9 1.3E+02 0.0045 18.4 4.4 25 76-100 58-82 (88)
340 3fg2_P Putative rubredoxin red 23.8 97 0.0033 24.1 4.6 37 77-116 2-40 (404)
341 3egc_A Putative ribose operon 23.8 2E+02 0.007 20.6 8.7 78 76-156 38-125 (291)
342 2dwc_A PH0318, 433AA long hypo 23.3 2.7E+02 0.0091 21.7 8.5 54 77-133 20-88 (433)
343 2qa1_A PGAE, polyketide oxygen 23.3 97 0.0033 25.2 4.6 33 76-111 11-43 (500)
344 4hb9_A Similarities with proba 23.3 77 0.0026 24.1 3.8 29 78-109 3-31 (412)
345 1c0p_A D-amino acid oxidase; a 23.3 85 0.0029 23.7 4.1 32 76-110 6-37 (363)
346 2x5o_A UDP-N-acetylmuramoylala 23.3 89 0.003 24.9 4.3 37 76-115 5-41 (439)
347 1a4i_A Methylenetetrahydrofola 23.3 1.3E+02 0.0045 23.2 5.0 35 75-111 164-198 (301)
348 3dje_A Fructosyl amine: oxygen 23.2 92 0.0031 24.3 4.3 34 76-112 6-40 (438)
349 2vo1_A CTP synthase 1; pyrimid 23.2 64 0.0022 24.9 3.1 48 91-138 219-270 (295)
350 3nmy_A Xometc, cystathionine g 23.1 2.7E+02 0.0091 21.7 7.5 40 117-156 141-183 (400)
351 3jtm_A Formate dehydrogenase, 23.0 1E+02 0.0035 24.1 4.5 35 74-111 162-196 (351)
352 1wwk_A Phosphoglycerate dehydr 23.0 1E+02 0.0035 23.4 4.4 36 73-111 139-174 (307)
353 1y7p_A Hypothetical protein AF 22.9 2.2E+02 0.0075 21.0 5.9 80 76-156 87-172 (223)
354 2x8g_A Thioredoxin glutathione 22.9 2.1E+02 0.0072 23.5 6.7 41 76-119 286-327 (598)
355 1fl2_A Alkyl hydroperoxide red 22.9 1.7E+02 0.0057 21.3 5.6 47 76-126 144-190 (310)
356 2ekl_A D-3-phosphoglycerate de 22.9 97 0.0033 23.7 4.3 36 73-111 139-174 (313)
357 3qhx_A Cystathionine gamma-syn 22.8 2.3E+02 0.0079 21.7 6.6 39 117-155 140-181 (392)
358 1qe0_A Histidyl-tRNA synthetas 22.7 1.7E+02 0.0057 23.0 5.8 32 77-108 330-362 (420)
359 1ati_A Glycyl-tRNA synthetase; 22.7 1.9E+02 0.0063 23.8 6.2 57 76-136 398-460 (505)
360 2q7v_A Thioredoxin reductase; 22.7 96 0.0033 22.9 4.2 29 78-109 10-38 (325)
361 4dna_A Probable glutathione re 22.6 87 0.003 24.9 4.1 31 77-110 6-36 (463)
362 2gcg_A Glyoxylate reductase/hy 22.6 1E+02 0.0035 23.7 4.4 35 74-111 153-187 (330)
363 3urh_A Dihydrolipoyl dehydroge 22.6 94 0.0032 24.9 4.3 32 76-110 25-56 (491)
364 3lzw_A Ferredoxin--NADP reduct 22.6 82 0.0028 23.1 3.8 32 77-111 8-39 (332)
365 3ihm_A Styrene monooxygenase A 22.6 84 0.0029 24.8 4.0 34 76-112 22-55 (430)
366 3qfe_A Putative dihydrodipicol 22.4 1.5E+02 0.0053 22.7 5.4 78 76-153 79-166 (318)
367 3o0h_A Glutathione reductase; 22.3 91 0.0031 25.0 4.2 31 77-110 27-57 (484)
368 3sr3_A Microcin immunity prote 22.3 68 0.0023 25.0 3.3 32 76-107 13-49 (336)
369 2x3n_A Probable FAD-dependent 22.2 81 0.0028 24.3 3.8 32 77-111 7-38 (399)
370 2c2x_A Methylenetetrahydrofola 22.2 1.2E+02 0.004 23.2 4.5 50 74-131 156-207 (281)
371 2xdo_A TETX2 protein; tetracyc 22.1 89 0.003 24.1 4.0 33 76-111 26-58 (398)
372 3fro_A GLGA glycogen synthase; 22.1 1.1E+02 0.0039 23.2 4.6 28 84-111 17-44 (439)
373 1m32_A 2-aminoethylphosphonate 21.9 2.4E+02 0.0082 20.7 8.1 25 102-126 103-127 (366)
374 1jw9_B Molybdopterin biosynthe 21.9 84 0.0029 23.1 3.6 36 76-114 31-67 (249)
375 3itj_A Thioredoxin reductase 1 21.9 1.9E+02 0.0064 21.1 5.7 34 76-112 173-206 (338)
376 2o4c_A Erythronate-4-phosphate 21.9 70 0.0024 25.5 3.3 56 75-133 115-173 (380)
377 2v9d_A YAGE; dihydrodipicolini 21.8 2E+02 0.0067 22.4 5.9 77 76-152 99-182 (343)
378 2qbu_A Precorrin-2 methyltrans 21.7 67 0.0023 23.0 3.0 33 76-108 94-128 (232)
379 1wd5_A Hypothetical protein TT 21.6 1E+02 0.0035 21.8 4.0 30 127-156 119-148 (208)
380 1kkl_H Phosphocarrier protein 21.6 1.1E+02 0.0039 19.4 3.7 25 76-100 70-94 (100)
381 2q0l_A TRXR, thioredoxin reduc 21.5 2.4E+02 0.008 20.4 7.1 47 76-125 143-189 (311)
382 3ndc_A Precorrin-4 C(11)-methy 21.5 64 0.0022 24.1 2.9 33 76-108 76-110 (264)
383 3h5d_A DHDPS, dihydrodipicolin 21.5 2.7E+02 0.0093 21.1 6.6 79 76-154 75-161 (311)
384 2uzz_A N-methyl-L-tryptophan o 21.5 60 0.002 24.6 2.8 32 77-111 3-34 (372)
385 1u6t_A SH3 domain-binding glut 21.4 53 0.0018 21.8 2.2 52 91-144 19-79 (121)
386 1vdc_A NTR, NADPH dependent th 21.4 2.4E+02 0.0084 20.6 6.8 48 76-126 159-206 (333)
387 3gg9_A D-3-phosphoglycerate de 21.4 1.3E+02 0.0044 23.5 4.8 35 74-111 158-192 (352)
388 1p9o_A Phosphopantothenoylcyst 21.4 1.3E+02 0.0043 23.4 4.6 27 90-116 67-94 (313)
389 3l21_A DHDPS, dihydrodipicolin 21.3 2.7E+02 0.0093 21.1 6.6 78 76-153 83-167 (304)
390 3h9u_A Adenosylhomocysteinase; 21.3 61 0.0021 26.5 2.9 56 75-133 210-272 (436)
391 3zrp_A Serine-pyruvate aminotr 21.2 1.4E+02 0.0048 22.3 4.9 20 116-135 114-134 (384)
392 3st7_A Capsular polysaccharide 21.2 1.1E+02 0.0037 23.3 4.3 40 90-133 12-52 (369)
393 1yob_A Flavodoxin 2, flavodoxi 21.2 1.2E+02 0.0042 20.6 4.2 58 80-144 3-63 (179)
394 1y51_A Phosphocarrier protein 21.2 1.2E+02 0.0041 18.5 3.7 25 76-100 58-82 (88)
395 3alj_A 2-methyl-3-hydroxypyrid 21.1 84 0.0029 24.0 3.6 33 76-111 11-43 (379)
396 3qe2_A CPR, P450R, NADPH--cyto 21.0 44 0.0015 28.4 2.1 33 80-112 21-57 (618)
397 1o97_C Electron transferring f 21.0 2.6E+02 0.0089 20.8 7.6 73 78-152 58-139 (264)
398 3d1c_A Flavin-containing putat 21.0 90 0.0031 23.4 3.8 32 77-111 5-37 (369)
399 3aw8_A PURK, phosphoribosylami 21.0 2.8E+02 0.0095 21.0 7.5 51 79-132 2-64 (369)
400 3lc0_A Histidyl-tRNA synthetas 20.9 1.1E+02 0.0037 24.9 4.4 57 77-136 362-420 (456)
401 3oet_A Erythronate-4-phosphate 20.9 90 0.0031 24.9 3.8 56 75-133 118-176 (381)
402 3ged_A Short-chain dehydrogena 20.9 2.5E+02 0.0086 20.5 6.9 51 78-135 3-53 (247)
403 1cvr_A Gingipain R, RGPB; casp 20.8 1.3E+02 0.0044 24.4 4.7 51 76-126 9-60 (435)
404 2hmc_A AGR_L_411P, dihydrodipi 20.7 1.8E+02 0.0062 22.6 5.5 78 76-154 91-178 (344)
405 3vot_A L-amino acid ligase, BL 20.7 56 0.0019 25.7 2.5 31 76-109 5-35 (425)
406 3s2u_A UDP-N-acetylglucosamine 20.6 1.2E+02 0.004 23.4 4.4 32 78-109 4-37 (365)
407 1vdm_A Purine phosphoribosyltr 20.6 72 0.0025 21.2 2.8 30 127-156 82-111 (153)
408 1gdh_A D-glycerate dehydrogena 20.6 1.2E+02 0.0041 23.2 4.4 35 73-110 143-177 (320)
409 3pdw_A Uncharacterized hydrola 20.5 33 0.0011 24.8 1.0 28 85-112 21-48 (266)
410 2e0n_A Precorrin-2 C20-methylt 20.5 72 0.0024 23.5 3.0 76 76-155 96-196 (259)
411 3tla_A MCCF; serine protease, 20.4 77 0.0026 25.1 3.3 33 76-108 43-80 (371)
412 1vjo_A Alanine--glyoxylate ami 20.4 2.8E+02 0.0094 20.8 6.7 55 101-155 131-189 (393)
413 4ffl_A PYLC; amino acid, biosy 20.4 2.8E+02 0.0097 20.9 7.1 52 78-132 3-68 (363)
414 3c96_A Flavin-containing monoo 20.3 1.1E+02 0.0037 23.7 4.2 33 76-111 4-37 (410)
415 1ebd_A E3BD, dihydrolipoamide 20.3 1.1E+02 0.0039 24.1 4.3 32 77-111 4-35 (455)
416 1tll_A Nitric-oxide synthase, 20.1 3E+02 0.01 23.6 7.1 71 76-153 10-86 (688)
417 2vou_A 2,6-dihydroxypyridine h 20.1 90 0.0031 24.1 3.6 33 76-111 5-37 (397)
418 2lnd_A De novo designed protei 20.1 1.7E+02 0.0057 18.2 4.5 36 76-111 51-86 (112)
419 4got_A Methionine-binding lipo 20.0 84 0.0029 23.6 3.3 27 85-111 15-41 (249)
No 1
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=99.96 E-value=2.4e-28 Score=197.11 Aligned_cols=140 Identities=63% Similarity=1.036 Sum_probs=122.3
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCcEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKDIT 80 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~~~ 80 (158)
|++|+|++|++.|+++|++.++|++||+++.+|+.+.++.+.+....+.+.+|+++++++ |.|++
T Consensus 156 V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~~~~~~~~~~v~p~~~~~~~~~~~Gk~~v~~~---------------g~dv~ 220 (341)
T 2ozl_B 156 VVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQ---------------GTHIT 220 (341)
T ss_dssp EECCCSHHHHHHHHHHHHHSSSCEEEEECHHHHTCEEECCHHHHSTTCCCCTTCCEEEEC---------------CSSEE
T ss_pred EEEeCCHHHHHHHHHHHHhcCCCEEEEEChhhhcCCCCcCCccCCccccccCCceEEecc---------------CCCEE
Confidence 589999999999999999999999999998776543222111112234567899999988 89999
Q ss_pred EEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHc-CC
Q psy7291 81 IVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIME-IP 155 (158)
Q Consensus 81 ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~-~~ 155 (158)
||++|+++..+++|++.|+++|++++||++++++|||++.+.++++++++|+++||+...||||+.|++++.+ ++
T Consensus 221 iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~Gg~g~~v~~~l~~~~~ 296 (341)
T 2ozl_B 221 VVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPA 296 (341)
T ss_dssp EEECSTHHHHHHHHHHHHHTTTCCEEEEECCEEETCCHHHHHHHHHHHSCEEEECSSCSTTCHHHHHHHHHHHSTT
T ss_pred EEEeCHHHHHHHHHHHHHHhcCCCeEEEeeeeecCCCHHHHHHHHhcCCeEEEEecCcccCcHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988 65
No 2
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=99.95 E-value=4.5e-28 Score=194.18 Aligned_cols=137 Identities=47% Similarity=0.661 Sum_probs=121.3
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCcEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKDIT 80 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~~~ 80 (158)
|++|+|++|++.|+++|+++++|++||+++++++...+ .+....+.+.+|+++++++ |.|++
T Consensus 144 V~~Psd~~e~~~~l~~a~~~~~Pv~i~~p~~l~r~~~~---~~~~~~~~~~~Gk~~~~~~---------------g~dv~ 205 (324)
T 1w85_B 144 VVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQ---EVPEGEYTIPIGKADIKRE---------------GKDIT 205 (324)
T ss_dssp EECCSSHHHHHHHHHHHHHSSSCEEEEEETTTSSSCCE---ECCSSCCCCCTTCCEEEEC---------------CSSEE
T ss_pred EEeeCCHHHHHHHHHHHHHcCCCEEEEechHhcCCCCC---CCCCccccccCCceEEEec---------------CCCEE
Confidence 58999999999999999999999999999888754211 1112234577899999988 89999
Q ss_pred EEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHcCC
Q psy7291 81 IVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 81 ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~~~ 155 (158)
||++|+++..+++|++.|+++|++++||++++++|||++.+.++++++++++++|||...||||++|++++.+++
T Consensus 206 iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~Gg~g~~v~~~l~~~~ 280 (324)
T 1w85_B 206 IIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERA 280 (324)
T ss_dssp EEECTTHHHHHHHHHHHHHHTTCCEEEEECSEEESCCHHHHHHHHHHHSCEEEEEEEETTSSSHHHHHHHHHHHH
T ss_pred EEEecHHHHHHHHHHHHHHhcCCCEEEEEeeeecCCCHHHHHHHHhhCCcEEEEeCCCcCChHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988764
No 3
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=99.95 E-value=8.6e-28 Score=192.52 Aligned_cols=137 Identities=44% Similarity=0.599 Sum_probs=121.4
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCcEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKDIT 80 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~~~ 80 (158)
|++|+|++|++.++++|+++++|++||+++++++...+ .+....+.+.+|+++++++ |.|++
T Consensus 145 V~~P~d~~e~~~~l~~a~~~~~Pv~i~~p~~l~~~~~~---~~~~~~~~~~~Gk~~~~~~---------------g~dv~ 206 (324)
T 1umd_B 145 VVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKE---EVPEEDYTLPIGKAALRRE---------------GKDLT 206 (324)
T ss_dssp EEECCSHHHHHHHHHHHHHCSSCEEEEEEGGGSSSCCE---ECCSSCCCCCTTCCEEEEC---------------CSSEE
T ss_pred EEEeCCHHHHHHHHHHHHhcCCCEEEEechHhcCCCCC---CcCCCCccccCCcceEEec---------------CCCEE
Confidence 58999999999999999999999999999888754211 1112234567899999988 89999
Q ss_pred EEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHcCC
Q psy7291 81 IVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 81 ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~~~ 155 (158)
||++|+++..+++|++.|+++|++++||++++++|||++.+.++++++++++++|||...||+|+.|++.+.+++
T Consensus 207 iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~ 281 (324)
T 1umd_B 207 LICYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDL 281 (324)
T ss_dssp EEECGGGHHHHHHHHHHHHHTTCCEEEEECCEEETCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHH
T ss_pred EEEecHHHHHHHHHHHHHHhcCCCEEEEEeceecCCCHHHHHHHHhcCCeEEEEecCCcCCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988753
No 4
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=99.95 E-value=7.7e-28 Score=194.19 Aligned_cols=137 Identities=34% Similarity=0.535 Sum_probs=121.0
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCcEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKDIT 80 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~~~ 80 (158)
|++|+|++|++.|+++|+++++|++||+++++++...+ ......+.+.+|+++++++ |.|++
T Consensus 162 V~~Psd~~e~~~~l~~a~~~~~Pv~i~~p~~l~r~~~~---~~~~~~~~~~~G~~~v~~~---------------g~dv~ 223 (342)
T 2bfd_B 162 VVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQE---------------GSDVT 223 (342)
T ss_dssp EECCSSHHHHHHHHHHHHHSSSCEEEEEEGGGTTSCCE---EEESSCCCCCSSCCEEEEC---------------CSSEE
T ss_pred EEeeCCHHHHHHHHHHHHhcCCcEEEEecchhcCCCCC---CCCCcccceeCCceEEecc---------------CCCEE
Confidence 58999999999999999999999999999887754211 1111234567899999988 89999
Q ss_pred EEEechhHHHHHHHHHHHHhC-CCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHcCC
Q psy7291 81 IVGHSKAVETALDAAKILAGQ-GIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 81 ii~~G~~~~~a~ea~~~L~~~-gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~~~ 155 (158)
||++|+++..+++|++.|+++ |++++||++++++|||++.+.++++++++++++|||...||||+.|++++.+++
T Consensus 224 iia~G~~~~~a~~Aa~~L~~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~ 299 (342)
T 2bfd_B 224 LVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEEC 299 (342)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHCCCEEEEECCEEESCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHHHhhcCCCEEEEeeeecCCCCHHHHHHHHhcCCEEEEEEeCccCCcHHHHHHHHHHhhC
Confidence 999999999999999999999 999999999999999999999999999999999999989999999999988754
No 5
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=99.94 E-value=1.1e-26 Score=189.06 Aligned_cols=134 Identities=44% Similarity=0.651 Sum_probs=118.0
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCcEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKDIT 80 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~~~ 80 (158)
|++|+|++|++.|+++|++.++|++||+|+++++...+ .+....+.+.+|+++++++ |.|++
T Consensus 192 V~~Psd~~e~~~ll~~A~~~~~Pv~i~~p~~l~r~~~~---~v~~~~~~~~~G~~~v~~~---------------g~dv~ 253 (369)
T 1ik6_A 192 VVMPSTPYNAKGLLKAAIRGDDPVVFLEPKILYRAPRE---EVPEGDYVVEIGKARVARE---------------GDDVT 253 (369)
T ss_dssp EECCCSHHHHHHHHHHHHHSSSCEEEEEEGGGSSCCCE---EEECSSCCCCTTCCEEEEC---------------CSSEE
T ss_pred EEecCCHHHHHHHHHHHHhCCCCEEEEEehhhhccCCC---CcCCCcccccCCceEEEEc---------------CCCEE
Confidence 58999999999999999999999999999888754211 1111234567899999998 89999
Q ss_pred EEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHcCC
Q psy7291 81 IVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 81 ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~~~ 155 (158)
||++|+++..+++|++.|+ | +++||++++++|||++.|.++++++++++++||+...||||++|++++.+++
T Consensus 254 Iia~G~~v~~a~~Aa~~L~--G-~v~Vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~GG~g~~v~~~l~~~~ 325 (369)
T 1ik6_A 254 LVTYGAVVHKALEAAERVK--A-SVEVVDLQTLNPLDFDTVLKSVSKTGRLIIAHDSPKTGGLGAEVRALVAEKA 325 (369)
T ss_dssp EEECTTHHHHHHHHHHTSS--S-CEEEEECCEEETTCHHHHHHHHHHHCCEEEEEEEESTTSHHHHHHHHHHHHS
T ss_pred EEEeCHHHHHHHHHHHHhC--C-CeEEEeeeecCCCCHHHHHHHHhccCeEEEEecCCcCCcHHHHHHHHHHhhC
Confidence 9999999999999999997 8 9999999999999999999999999999999999999999999999998765
No 6
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=99.94 E-value=2.9e-26 Score=184.63 Aligned_cols=137 Identities=39% Similarity=0.566 Sum_probs=117.1
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccC---CCC----------cccCCCcccccCceEEEeeccccccC
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYP---MGD----------EALSKDFVLPIGKAKVEKQGEAFYHL 67 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~---~~~----------~~~~~~~~~~~g~~~vl~~~~~~~~~ 67 (158)
|++|+|++|++.|+++|++.++|++||+++++++...+ ..+ .+....+.+.+|+++++++
T Consensus 146 V~~Psd~~e~~~~l~~A~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~------- 218 (338)
T 1qs0_B 146 TVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRP------- 218 (338)
T ss_dssp EECCCSHHHHHHHHHHHHHSSSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCCEEEC-------
T ss_pred EEeeCCHHHHHHHHHHHHhcCCcEEEEEchHhhcCcccccccCccchhhcccccccCCCCcccccCceeEecC-------
Confidence 58999999999999999999999999999887754322 000 1111233456788888887
Q ss_pred CCcccccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHH
Q psy7291 68 DAPVIRVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEI 147 (158)
Q Consensus 68 ~~~~~~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i 147 (158)
|.|++||++|+++..+++|++. +|++++||++++++|||++.|.++++++++++++||+...||+|++|
T Consensus 219 --------g~dv~iva~G~~~~~a~~Aa~~---~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~gG~g~~V 287 (338)
T 1qs0_B 219 --------GNDVSVLTYGTTVYVAQVAAEE---SGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAEL 287 (338)
T ss_dssp --------CSSCEEEECTTHHHHHHHHHHH---HCCCCEEEECSEEESCCHHHHHHHHHHHSCEEEEESSCSTTSTHHHH
T ss_pred --------CCCEEEEEeCHHHHHHHHHHHH---cCCCEEEEeecccCCCCHHHHHHHHhcCCEEEEEecCCcCCcHHHHH
Confidence 8999999999999999999987 59999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCC
Q psy7291 148 SARIMEIP 155 (158)
Q Consensus 148 ~~~l~~~~ 155 (158)
++++.+++
T Consensus 288 ~~~l~~~~ 295 (338)
T 1qs0_B 288 VSLVQEHC 295 (338)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 99998765
No 7
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.93 E-value=8.5e-26 Score=194.25 Aligned_cols=133 Identities=23% Similarity=0.351 Sum_probs=116.9
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCc--
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKD-- 78 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~-- 78 (158)
|++|+|++|++.|+++|++.++|++||+++... | .++.....+.+|+++++++ |.|
T Consensus 443 V~~P~d~~e~~~~l~~a~~~~gp~~ir~~r~~~----p---~~~~~~~~~~~Gka~vl~e---------------g~d~d 500 (616)
T 3mos_A 443 VFYPSDGVATEKAVELAANTKGICFIRTSRPEN----A---IIYNNNEDFQVGQAKVVLK---------------SKDDQ 500 (616)
T ss_dssp EECCCSHHHHHHHHHHHHTCCSEEEEECCSSCC----B---CCSCTTCCCCTTCCEEEEC---------------CSSEE
T ss_pred EEecCCHHHHHHHHHHHHhcCCCEEEEEeCCCC----C---ccCCCcccccCCeEEEEEe---------------CCCCC
Confidence 579999999999999999999999999754321 1 1122234567899999998 555
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC-CeEEEEeCCcCCCChHHHHHHHHHcCC
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT-NYLISVEGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~-~~vvvvEe~~~~GG~g~~i~~~l~~~~ 155 (158)
++||++|+++..|++|+++|+++|++++|||+++++|||++.|.++++++ ++|+|+|||...||+|++|++.+++++
T Consensus 501 v~iva~G~~v~~al~Aa~~L~~~Gi~v~Vidlr~l~PlD~e~i~~~~~~~~~~vvvvEe~~~~GG~G~~v~~~l~~~~ 578 (616)
T 3mos_A 501 VTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEP 578 (616)
T ss_dssp EEEECCTHHHHHHHHHHHHHHTTTCEEEEEECSEEESCCHHHHHHHHHHTTTEEEEEEEEESTTSHHHHHHHHHTTCT
T ss_pred EEEEEeCHHHHHHHHHHHHHHhcCCCEEEEEeCccCCCCHHHHHHHHHhcCCEEEEEcCCCCCcCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998 999999999999999999999999864
No 8
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.90 E-value=1.3e-23 Score=181.09 Aligned_cols=131 Identities=25% Similarity=0.290 Sum_probs=115.2
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCcEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKDIT 80 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~~~ 80 (158)
|++|+|++|++.|+++|++.++|++||+++..+.. .+. ...+.+++|+++++++ |.|++
T Consensus 451 v~~P~d~~e~~~~~~~a~~~~~Pv~i~~~r~~~~~-~~~-----~~~~~~~~G~~~~~~~---------------g~dv~ 509 (629)
T 2o1x_A 451 IGLPKDAAELRGMLKYAQTHDGPFAIRYPRGNTAQ-VPA-----GTWPDLKWGEWERLKG---------------GDDVV 509 (629)
T ss_dssp EECCSSHHHHHHHHHHHHHSSSCEEEECCSSBCCC-CCT-----TCCCCCCTTCCEEEEC---------------CSSEE
T ss_pred EEecCCHHHHHHHHHHHHhCCCCEEEEecCCCCCC-Ccc-----cccccccCCceEEEee---------------CCCEE
Confidence 58999999999999999999999999987654321 010 1233467899999998 89999
Q ss_pred EEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHcCCC
Q psy7291 81 IVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIMEIPY 156 (158)
Q Consensus 81 ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~~~~ 156 (158)
||++|+++..|++|++.|+ +++||++++++|||++.+.++++++++++|+||+...||+|++|++++.++++
T Consensus 510 iva~G~~v~~a~~Aa~~L~----~~~Vi~~~~~~Pld~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~~ 581 (629)
T 2o1x_A 510 ILAGGKALDYALKAAEDLP----GVGVVNARFVKPLDEEMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMNL 581 (629)
T ss_dssp EEECHHHHHHHHHHHTTCT----TEEEEECCEEESCCHHHHHHHHHHCSEEEEEEEEESSSSHHHHHHHHHHHTTC
T ss_pred EEEecHHHHHHHHHHHHhc----CCEEEeeCCCCCCcHHHHHHHHhhCCcEEEEecCCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999886 79999999999999999999999999999999999999999999999998763
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.90 E-value=1.8e-23 Score=179.99 Aligned_cols=130 Identities=19% Similarity=0.286 Sum_probs=113.5
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCCcE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGKDI 79 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~~ 79 (158)
|++|+|++|++.|+++|++. ++|++||+++..+... + . +..+.+..|+++++++ |.|+
T Consensus 448 v~~P~d~~e~~~~l~~a~~~~~~Pv~i~~~r~~~~~~-~----~-~~~~~~~~G~~~~~~~---------------g~dv 506 (621)
T 2o1s_A 448 IMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGV-E----L-TPLEKLPIGKGIVKRR---------------GEKL 506 (621)
T ss_dssp EECCSSHHHHHHHHHHHHHCCSSCEEEECCSSBCCCC-C----C-CCCCCCCTTCCEEEEC---------------CSSE
T ss_pred EEecCCHHHHHHHHHHHHHcCCCCEEEEeCCCCCCCC-C----C-CccccccCCceEEeec---------------CCCE
Confidence 58999999999999999998 9999999886554221 1 1 1114567899999998 8999
Q ss_pred EEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHcCCC
Q psy7291 80 TIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIMEIPY 156 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~~~~ 156 (158)
+||++|+++..+++| ++|++++||++++++|||++.+.++++++++++|+||+...||+|++|++++.++++
T Consensus 507 ~iva~G~~~~~a~~A-----~~Gi~v~Vi~~~~~~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~~ 578 (621)
T 2o1s_A 507 AILNFGTLMPEAAKV-----AESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRK 578 (621)
T ss_dssp EEEEESTTHHHHHHH-----HHHHTCEEEECCEEESCCHHHHHHHHHHCSEEEEEEEEESTTSHHHHHHHHHHHTTC
T ss_pred EEEEecHHHHHHHHH-----cCCCCEEEEecCccCCCCHHHHHHHHccCCeEEEEECCCCCCCHHHHHHHHHHhcCC
Confidence 999999999999999 348999999999999999999999999999999999999999999999999998864
No 10
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=99.82 E-value=2e-20 Score=165.56 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=108.9
Q ss_pred CcccCCHHHHHHHHHHHHhC--CCcEEEEecccccccccCCCCc--ccCCCcccccCceEE---EeeccccccCCCcccc
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD--PDPVVFLENELLYGVQYPMGDE--ALSKDFVLPIGKAKV---EKQGEAFYHLDAPVIR 73 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~--~~P~~iR~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~v---l~~~~~~~~~~~~~~~ 73 (158)
|++|+|+.|+..||++++.. ++|++|++||.+|+.+.+..+. .....+...+|++.+ +++
T Consensus 680 V~~Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk~llR~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~------------- 746 (868)
T 2yic_A 680 IAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGD------------- 746 (868)
T ss_dssp EECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTSCBCHHHHHSCCCCSEECCHHHHTSSCC-------------
T ss_pred EEEeCCHHHHHHHHHHHHhcCCCCcEEEEechHHhCCCCCCCCccccCCCCceecCCcceeeccccc-------------
Confidence 67999999999999998875 4999999999988654332211 000122225677766 566
Q ss_pred cCCCcE--EEEEechhHHHHHHHHHHHHhCC-CcEEEEEeccccCCCHHHHHHHHhCCCe---EEEEeCCcCCCChHHHH
Q psy7291 74 VTGKDI--TIVGHSKAVETALDAAKILAGQG-IDAEVINLRSLRPLDIETITKSVMKTNY---LISVEGGWPQCGIGSEI 147 (158)
Q Consensus 74 ~~g~~~--~ii~~G~~~~~a~ea~~~L~~~g-i~~~vi~~~~l~Pld~~~l~~~~~~~~~---vvvvEe~~~~GG~g~~i 147 (158)
|.|+ +|||+|.+ ..++++++ +++| +++.||++++|+|||.+.|.++++++++ |+++||+..+||+|+.|
T Consensus 747 --g~dv~r~Ii~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v 821 (868)
T 2yic_A 747 --RNKVTRLLLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSF 821 (868)
T ss_dssp --GGGCCEEEEECSTH-HHHHHHHH--HHHTCTTEEEEEECEEESCCHHHHHHHHHTCTTCCEEEEEEEEETTSTTHHHH
T ss_pred --CCceeEEEEEecHH-HHHHHHHH--HhCCCCCEEEEEeeecCCCCHHHHHHHHHhcCCCceEEEEEeCCCCCCcHHHH
Confidence 7889 99999999 56665555 5568 9999999999999999999999999887 99999999999999999
Q ss_pred HHHHHcC
Q psy7291 148 SARIMEI 154 (158)
Q Consensus 148 ~~~l~~~ 154 (158)
++.+.+.
T Consensus 822 ~~~l~e~ 828 (868)
T 2yic_A 822 GLTLPEI 828 (868)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998773
No 11
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=99.82 E-value=3e-20 Score=167.89 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=109.8
Q ss_pred CcccCCHHHHHHHHHHHHhC--CCcEEEEecccccccccCCCCc--ccCCCcccccCceEE---EeeccccccCCCcccc
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD--PDPVVFLENELLYGVQYPMGDE--ALSKDFVLPIGKAKV---EKQGEAFYHLDAPVIR 73 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~--~~P~~iR~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~v---l~~~~~~~~~~~~~~~ 73 (158)
|++|+|+.|+..||++++.. ++|++||+||.+|+.+.++... .....+...+|++.+ +++
T Consensus 925 V~~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk~L~R~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~------------- 991 (1113)
T 2xt6_A 925 IAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGD------------- 991 (1113)
T ss_dssp EECCSSHHHHHHHHHHHHHSSCCCCEEEEECSGGGSCSSSCBCHHHHHSCCCCSEECCHHHHTSCCC-------------
T ss_pred EEecCCHHHHHHHHHHHHhccCCCCEEEEechHHhCCCCCCCcccccCCCCccccCCcceeeccccC-------------
Confidence 57899999999999998875 4999999999988754332211 001122235677776 666
Q ss_pred cCCCcE--EEEEechhHHHHHHHHHHHHhCC-CcEEEEEeccccCCCHHHHHHHHhCCCe---EEEEeCCcCCCChHHHH
Q psy7291 74 VTGKDI--TIVGHSKAVETALDAAKILAGQG-IDAEVINLRSLRPLDIETITKSVMKTNY---LISVEGGWPQCGIGSEI 147 (158)
Q Consensus 74 ~~g~~~--~ii~~G~~~~~a~ea~~~L~~~g-i~~~vi~~~~l~Pld~~~l~~~~~~~~~---vvvvEe~~~~GG~g~~i 147 (158)
|.|+ +|||+|.+ ..++++++ +++| +++.||++++|+|||.+.|.++++++++ |+++||+..+||+|+.|
T Consensus 992 --g~dv~r~iv~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~gs~v 1066 (1113)
T 2xt6_A 992 --RNKVTRLLLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSF 1066 (1113)
T ss_dssp --STTCCEEEEECSTH-HHHHHHHH--HHHTCTTEEEEEESEEESCCHHHHHHHHTTCTTCCEEEEEEEEETTSTTHHHH
T ss_pred --ccccCEEEEEECHH-HHHHHHHH--HhCCCCCEEEEEeeeecCCCHHHHHHHHHhCCCCceEEEEecCCCCCCcHHHH
Confidence 8889 99999998 66666655 4568 9999999999999999999999999987 99999999999999999
Q ss_pred HHHHHcC
Q psy7291 148 SARIMEI 154 (158)
Q Consensus 148 ~~~l~~~ 154 (158)
++.+.+.
T Consensus 1067 ~~~l~e~ 1073 (1113)
T 2xt6_A 1067 GLTLPEI 1073 (1113)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998873
No 12
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.81 E-value=2.4e-20 Score=161.29 Aligned_cols=125 Identities=18% Similarity=0.178 Sum_probs=100.9
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCcEEEEecccccccccCCCCcccCCCc-ccccCceEEEeeccccccCCCcccccCCCc
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDF-VLPIGKAKVEKQGEAFYHLDAPVIRVTGKD 78 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P~~iR~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~vl~~~~~~~~~~~~~~~~~g~~ 78 (158)
|++|+|++|++.++++|++. ++|+|||+++..++. .....+ .+..| .+++++. ++.|
T Consensus 485 V~~Pad~~E~~~~l~~A~~~~~~Pv~i~~~r~~~~~-------~~~~~~~~~~~G-~~vl~~g-------------~~~d 543 (651)
T 2e6k_A 485 VIRPADAYETFYAWLVALRRKEGPTALVLTRQAVPL-------LSPEKARGLLRG-GYVLEDV-------------EEPQ 543 (651)
T ss_dssp EECCSSHHHHHHHHHHHHHCCSSCEEEECCSSCBCC-------CCHHHHGGGGGS-SEEEECC-------------SSCS
T ss_pred EEecCCHHHHHHHHHHHHHcCCCCEEEEEeCCCCCC-------CCcchhhhhcCC-CEEEeeC-------------CCCC
Confidence 58999999999999999997 899999987654321 110111 24556 4677771 0289
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH---HHHHHhCCCeEEEEeCCcCCCChHHHH
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET---ITKSVMKTNYLISVEGGWPQCGIGSEI 147 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~---l~~~~~~~~~vvvvEe~~~~GG~g~~i 147 (158)
++||++|+++..|++|++.|+++|++++||++++++|||.+. +..+++.+++++++|++.. +|+++.+
T Consensus 544 v~iva~G~~v~~al~Aa~~L~~~Gi~~~Vv~~~~~~p~d~~~~~~~~~v~~~~~~vv~vE~~~~-~G~~~~v 614 (651)
T 2e6k_A 544 GVLVATGSEVHLALRAQALLREKGVRVRVVSLPSFELFAAQPEAYRKEVLPPGLPVVAVEAGAS-LGWERYA 614 (651)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCcEEEEecCcCCccccccHHHHHHHhCcCCeEEEEeCCcc-CchHHhC
Confidence 999999999999999999999999999999999999999985 6666666678999999997 8888654
No 13
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.81 E-value=8.7e-20 Score=158.49 Aligned_cols=119 Identities=19% Similarity=0.238 Sum_probs=96.3
Q ss_pred CcccCCHHHHHHHHHHHHhCC---CcEEEEecccccccccCCCCcccCC-CcccccCceEEEeeccccccCCCcccccCC
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDP---DPVVFLENELLYGVQYPMGDEALSK-DFVLPIGKAKVEKQGEAFYHLDAPVIRVTG 76 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~---~P~~iR~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g 76 (158)
|++|+|+.|++.||++|++.+ +|++||+++...+. +... .+.+..|+ +++++ |
T Consensus 520 V~~Pad~~e~~~~l~~Ai~~~~~~~Pv~ir~~r~~~~~-------~~~~~~~~~~~G~-~vlr~---------------g 576 (700)
T 3rim_A 520 VVRPADANETAYAWRTILARRNGSGPVGLILTRQGVPV-------LDGTDAEGVARGG-YVLSD---------------A 576 (700)
T ss_dssp EECCSSHHHHHHHHHHHHTTTTCSSCEEEECCSSEECC-------CTTCCHHHHHHSC-EEEEC---------------C
T ss_pred EEeCCCHHHHHHHHHHHHHccCCCCCEEEEeccccCCC-------cCcccccccCCCc-EEEec---------------C
Confidence 689999999999999999875 59999986543221 1111 24567787 68887 4
Q ss_pred C--------cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHH--HHH-HHHhC-CCeEEEEeCCcCCCC
Q psy7291 77 K--------DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIE--TIT-KSVMK-TNYLISVEGGWPQCG 142 (158)
Q Consensus 77 ~--------~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~--~l~-~~~~~-~~~vvvvEe~~~~GG 142 (158)
. |++||++|+++..|++|++.|+++||+++|||+++++|||.+ .+. .+++. ++.+|++|++...|+
T Consensus 577 ~~~~~~~~~dvtiia~G~~v~~al~Aa~~L~~~Gi~~~VVd~~~i~p~D~~~~~~~~~v~~~~~~~~vtvEe~~~~G~ 654 (700)
T 3rim_A 577 GGLQPGEEPDVILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCW 654 (700)
T ss_dssp SCCCTTCCCSEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCTTCCCEEEECSSCSGGG
T ss_pred CccccCCCCCEEEEEechHHHHHHHHHHHHHhcCCCeEEEEeccccccCcccHHHHHHHhcccceEEEEEeCCCchhH
Confidence 3 999999999999999999999999999999999999999994 344 44453 678999999997765
No 14
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.81 E-value=6.7e-20 Score=159.17 Aligned_cols=123 Identities=20% Similarity=0.195 Sum_probs=98.0
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCcEEEEecccccccccCCCCcccCCCcc-cccCceEEEeeccccccCCCcccccCC--
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDFV-LPIGKAKVEKQGEAFYHLDAPVIRVTG-- 76 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P~~iR~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~vl~~~~~~~~~~~~~~~~~g-- 76 (158)
|++|+|+.|++.|+++|++. ++|++||++|...+. .....+. +..| .+++++ |
T Consensus 498 V~~Pad~~e~~~~l~~A~~~~~~Pv~i~~~r~~~~~-------~~~~~~~~~~~G-~~vl~~---------------g~~ 554 (680)
T 1gpu_A 498 VWRPADGNEVSAAYKNSLESKHTPSIIALSRQNLPQ-------LEGSSIESASKG-GYVLQD---------------VAN 554 (680)
T ss_dssp EECCCSHHHHHHHHHHHHHCSSCCEEEECCSSCBCC-------CTTCCHHHHTTS-CEEEEC---------------CSS
T ss_pred EEecCCHHHHHHHHHHHHHhCCCcEEEEecCCCCCC-------CCCcchhhccCC-CEEEec---------------CCC
Confidence 68999999999999999997 999999986543221 1111222 5567 477887 5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH---HHHHHhCCCeEEEEeCCcCCCChHHHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET---ITKSVMKTNYLISVEGGWPQCGIGSEI 147 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~---l~~~~~~~~~vvvvEe~~~~GG~g~~i 147 (158)
.|++||++|+++..|++|++.|+++|++++|||+++++|||++. +..+++.+.+++++|++.. +|+++.+
T Consensus 555 ~dvtiva~G~~v~~al~Aa~~L~~~Gi~~~Vvd~~~l~pld~~~~~~~~sv~~~~~~~v~vE~~~~-~g~~~~v 627 (680)
T 1gpu_A 555 PDIILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLAT-TCWGKYA 627 (680)
T ss_dssp CSEEEEECTHHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSCEEEECSSCS-TTGGGTC
T ss_pred CCEEEEEEcHHHHHHHHHHHHHHhcCCCEEEEEcCCCCcchhhhHHHHHHHhccCCceEEEeCCcc-ccHHHhc
Confidence 89999999999999999999999999999999999999999984 4445555324499999996 7887654
No 15
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.81 E-value=8.4e-20 Score=158.50 Aligned_cols=122 Identities=17% Similarity=0.226 Sum_probs=95.0
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCCC--
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTGK-- 77 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g~-- 77 (158)
|++|+|+.|++.||++|++. ++|++||+++...+.-. .......+.+..|+ +++++ |.
T Consensus 515 V~~Pad~~E~~~~l~~Ai~~~~~Pv~ir~~R~~~p~~~---~~~~~~~~~~~~G~-~vlr~---------------g~~g 575 (690)
T 3m49_A 515 VIRPADGNESVAAWRLALESTNKPTALVLTRQDLPTLE---GAKDDTYEKVAKGA-YVVSA---------------SKKE 575 (690)
T ss_dssp EECCSSHHHHHHHHHHHHHCSSSCEEEECCSSEEECCH---HHHTTHHHHHHTSC-EEEEC---------------CSSS
T ss_pred EEeeCCHHHHHHHHHHHHHcCCCCEEEEeecccCCCCC---ccccccccccCCCe-EEEEe---------------cCCC
Confidence 68999999999999999997 79999997654321100 00000013456776 67887 53
Q ss_pred --cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCH--HHHHH-HH-hCCCeEEEEeCCcCCC
Q psy7291 78 --DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDI--ETITK-SV-MKTNYLISVEGGWPQC 141 (158)
Q Consensus 78 --~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~--~~l~~-~~-~~~~~vvvvEe~~~~G 141 (158)
|++||++|+++..|++|++.|+++||+++|||+++++|||. +.+.+ ++ +++++++++|++...|
T Consensus 576 ~~dvtiia~G~~v~~Al~Aa~~L~~~GI~~~Vid~~~i~p~D~~d~~~~~~v~~~~~~~~v~vEe~~~~G 645 (690)
T 3m49_A 576 TADVILLATGSEVSLAVEAQKALAVDGVDASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEMGATFG 645 (690)
T ss_dssp SCSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTT
T ss_pred CCCEEEEEechHHHHHHHHHHHHHhcCCCeEEEecccCCcCccccHHHHHHHhhccCCeEEEEECCchhh
Confidence 99999999999999999999999999999999999999986 34444 44 3578899999999766
No 16
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.81 E-value=1.4e-19 Score=157.00 Aligned_cols=126 Identities=19% Similarity=0.265 Sum_probs=100.9
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCcEEEEecccccccccCCCCcccCCCc-ccccCceEEEeeccccccCCCcccccCC--
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDF-VLPIGKAKVEKQGEAFYHLDAPVIRVTG-- 76 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P~~iR~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~vl~~~~~~~~~~~~~~~~~g-- 76 (158)
|++|+|+.|++.|+++|++. ++|++||+++...+. .....+ .+..| .+++++.+ .|
T Consensus 503 V~~Pad~~e~~~~l~~a~~~~~~Pv~i~~~r~~~p~-------~~~~~~~~~~~G-a~vl~~~~------------~G~~ 562 (675)
T 1itz_A 503 MLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPH-------LPGTSIEGVEKG-GYTISDNS------------TGNK 562 (675)
T ss_dssp EECCCSHHHHHHHHHHHHHCTTSCEEEEECSSCBCC-------CTTCCHHHHTTS-SEEEEECC------------STTC
T ss_pred EEECCCHHHHHHHHHHHHHhCCCcEEEEecCCCCCC-------CCCccccccccC-CEEEeccc------------CCCC
Confidence 58999999999999999997 999999987543211 111122 35678 56777610 04
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH---HHHHHhCC-CeEEEEeCCcCCCChHHHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET---ITKSVMKT-NYLISVEGGWPQCGIGSEI 147 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~---l~~~~~~~-~~vvvvEe~~~~GG~g~~i 147 (158)
.|++||++|+++..|++|++.|+++|++++||++++++|||++. +..+++.+ +++|++|++.. +|+++.+
T Consensus 563 ~dv~iva~G~~v~~al~Aa~~L~~~Gi~v~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~G~~~~~ 636 (675)
T 1itz_A 563 PDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGST-LGWQKYV 636 (675)
T ss_dssp CSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCC-TTTHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCcEEEEEeccCcccccchHHHHHHHhccCCceEEEEECCcc-ccHHHhc
Confidence 79999999999999999999999999999999999999999985 55566554 78999999997 8898754
No 17
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.80 E-value=1.4e-19 Score=155.87 Aligned_cols=122 Identities=14% Similarity=0.212 Sum_probs=96.7
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCce-EEEeeccccccCCCcccccCCCcE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKA-KVEKQGEAFYHLDAPVIRVTGKDI 79 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vl~~~~~~~~~~~~~~~~~g~~~ 79 (158)
|++|+|+.|++.||++|++.++|+|||+++... .+.. ......+++. +++++. +|.|+
T Consensus 470 V~~P~d~~e~~~~l~~A~~~~~Pv~ir~~r~~~---~~~~-----~~~~~~~~~g~~vl~~~-------------~g~dv 528 (632)
T 3l84_A 470 TFRPADGVENVKAWQIALNADIPSAFVLSRQKL---KALN-----EPVFGDVKNGAYLLKES-------------KEAKF 528 (632)
T ss_dssp EECCSSHHHHHHHHHHHHHCSSCEEEECCSSCB---CCCC-----CCSBCCGGGSSEEEECC-------------TTCSE
T ss_pred EEecCCHHHHHHHHHHHHhCCCCEEEEEcCCCC---CCCc-----cccccccccccEEEEec-------------CCCCE
Confidence 689999999999999999999999999865432 1100 0112344444 777762 16899
Q ss_pred EEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH--HHHHHhCCCeEEEEeCCcCCCChHH
Q psy7291 80 TIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET--ITKSVMKTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~--l~~~~~~~~~vvvvEe~~~~GG~g~ 145 (158)
+||++|+++..|++|++.|+++||+++|||+++++|||++. +.+.+.+ +.||++|+|.. +|+++
T Consensus 529 tiia~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~~i~PlD~~~~~~~~sv~~-~~vv~vE~~~~-~g~~~ 594 (632)
T 3l84_A 529 TLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFEKQDKAYQERLLK-GEVIGVEAAHS-NELYK 594 (632)
T ss_dssp EEEECGGGHHHHHHHHHHHHHTTCCEEEEECSBHHHHHTSCHHHHHHHCC-SEEEEECSSCC-GGGGG
T ss_pred EEEEechHHHHHHHHHHHHHhcCCCeEEEecCcCCCcchhHHHHHHHhcC-CCEEEEeCChh-hhHHH
Confidence 99999999999999999999999999999999999999974 5666655 68999999985 55654
No 18
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.80 E-value=1.2e-19 Score=157.37 Aligned_cols=128 Identities=17% Similarity=0.193 Sum_probs=100.3
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCC-Cc
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTG-KD 78 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g-~~ 78 (158)
|++|+|++|++.|+++|++. ++|+|||+++..++.- +... . ....+..|. +++++. .| .|
T Consensus 490 V~~Pad~~E~~~~l~~a~~~~~~Pv~i~~~r~~~~~~-~~~~--~-~~~~~~~G~-~vl~~~-------------~g~~d 551 (669)
T 2r8o_A 490 TWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQ-ERTE--E-QLANIARGG-YVLKDC-------------AGQPE 551 (669)
T ss_dssp EECCSSHHHHHHHHHHHHHCSSSCEEEECCSSEECCC-CCCH--H-HHHHGGGSC-EEEECC-------------SSSCS
T ss_pred EEecCCHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCC-CCcc--c-hhhhccCCC-EEEecc-------------CCCCC
Confidence 58999999999999999997 8999999876544311 1000 0 001245674 667761 14 89
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH---HHHHHhCC-CeEEEEeCCcCCCChHHHH
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET---ITKSVMKT-NYLISVEGGWPQCGIGSEI 147 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~---l~~~~~~~-~~vvvvEe~~~~GG~g~~i 147 (158)
++||++|+++..|++|++.|+++|++++||++++++|||++. +..+++++ ++++++|++.. +|+++.+
T Consensus 552 v~iva~G~~v~~al~Aa~~L~~~Gi~~~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~g~~~~~ 623 (669)
T 2r8o_A 552 LIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIA-DYWYKYV 623 (669)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEEEEEEG-GGGHHHH
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCeEEEEeccCCccccchHHHHHHhccccCceEEEEeCCch-hhHHHHh
Confidence 999999999999999999999999999999999999999884 66666664 78999999996 7887643
No 19
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.79 E-value=1.1e-19 Score=157.63 Aligned_cols=122 Identities=20% Similarity=0.211 Sum_probs=102.6
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCcEEEEecccccccccCCCCcccCCCc-ccccCceEEEeeccccccCCCcccccCC--
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDF-VLPIGKAKVEKQGEAFYHLDAPVIRVTG-- 76 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P~~iR~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~vl~~~~~~~~~~~~~~~~~g-- 76 (158)
|++|+|+.|++.|+++|++. ++|++||+++..+.. .....+ .+..| ..++++ |
T Consensus 490 V~~Pad~~e~~~~l~~a~~~~~~Pv~i~~~r~~~~~-------~~~~~~~~~~~G-a~vl~~---------------g~~ 546 (673)
T 1r9j_A 490 VIRPSDQTETSGAWAVALSSIHTPTVLCLSRQNTEP-------QSGSSIEGVRHG-AYSVVD---------------VPD 546 (673)
T ss_dssp EECCSSHHHHHHHHHHHHHCTTCCEEEECCSSEECC-------CTTCCHHHHHTS-CEEEEC---------------CTT
T ss_pred EEeCCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCCC-------CCCcccccccCC-CEEEee---------------CCC
Confidence 58999999999999999997 899999987653321 111122 35677 678887 5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH---HHHHHhCCCeEEEEeCCcCCCChHHHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET---ITKSVMKTNYLISVEGGWPQCGIGSEI 147 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~---l~~~~~~~~~vvvvEe~~~~GG~g~~i 147 (158)
.|++||++|+++..|++|++.|+++ ++++||++++++|||++. +.++++++.++|++|++.. +|+++.+
T Consensus 547 ~dv~lia~G~~v~~al~Aa~~L~~~-i~~~Vv~~~sl~pld~~~~~~i~~~~~~~~~vv~vE~~~~-~g~~~~v 618 (673)
T 1r9j_A 547 LQLVIVASGSEVSLAVDAAKALSGE-LRVRVVSMPCQELFDAQPDTYRQAVLPAGVPVVSVEAYVS-FGWEKYS 618 (673)
T ss_dssp CSEEEEECGGGHHHHHHHHHHHTTT-CCEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC
T ss_pred CCEEEEEechhHHHHHHHHHHHHhc-CCEEEEeCCCCchhhcccHHHHHHHhccCCeEEEEeCCCc-cchHHhc
Confidence 8999999999999999999999998 999999999999999985 8889988888999999997 8887654
No 20
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=99.79 E-value=2.8e-19 Score=159.09 Aligned_cols=138 Identities=14% Similarity=0.180 Sum_probs=109.7
Q ss_pred CcccCCHHHHHHHHHHHH-hC-CCcEEEEecccccccccCCCC--cccCCCcccccCceEEEeeccccccCCCcccccCC
Q psy7291 1 VVSPYNSEDAKGLLKAAI-RD-PDPVVFLENELLYGVQYPMGD--EALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTG 76 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~-~~-~~P~~iR~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g 76 (158)
|++|+|+.|+..||++++ +. ++|++||+||++++.+..... .+....+.+.+|++.+++ |
T Consensus 748 V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~~~~~~~~~~~~~~f~~~ig~~~~~~----------------g 811 (933)
T 2jgd_A 748 VCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELD----------------P 811 (933)
T ss_dssp EECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTCCBCHHHHHHCCCCSEECCCSCCC----------------G
T ss_pred EEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCCCCcCCccccCCCceeecCCcceEee----------------c
Confidence 579999999999999985 64 899999999998865432210 111123344566665443 4
Q ss_pred CcE--EEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCC---eEEEEeCCcCCCChHHHHHHHH
Q psy7291 77 KDI--TIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTN---YLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 77 ~~~--~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~---~vvvvEe~~~~GG~g~~i~~~l 151 (158)
.|+ +|+++|.+...+.+|.+.|.++ +++||++++|+|||.+.|.+++++++ .|+++||+..+||+|+.|++.|
T Consensus 812 ~dV~~vI~~~G~v~~~l~aa~~~l~~~--~v~VIdl~~l~Pld~e~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l 889 (933)
T 2jgd_A 812 KGVKRVVMCSGKVYYDLLEQRRKNNQH--DVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHF 889 (933)
T ss_dssp GGCCEEEEECTTHHHHHHHHHHHTTCC--SEEEEEECEEESCCHHHHHHHHGGGTTCCEEEEEEEEETTSTTHHHHHHHH
T ss_pred CcceEEEEEchHHHHHHHHHHHHcccC--CeEEEEeeccCCCCHHHHHHHHHhCCCCceEEEEecCCCcCCHHHHHHHHH
Confidence 567 7888888877777777888654 89999999999999999999999988 8999999999999999999999
Q ss_pred HcCCC
Q psy7291 152 MEIPY 156 (158)
Q Consensus 152 ~~~~~ 156 (158)
.+...
T Consensus 890 ~~~~~ 894 (933)
T 2jgd_A 890 REVIP 894 (933)
T ss_dssp HTTSC
T ss_pred HHhcc
Confidence 88754
No 21
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=99.79 E-value=4e-19 Score=123.05 Aligned_cols=76 Identities=24% Similarity=0.344 Sum_probs=72.2
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
+|.|++||+||+++..+++|++.|+++|++++++++++++|||.+.+.++++++++|+|+|++. .||+|+.|...+
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~-~G~l~~~i~~~~ 87 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNY-TAQAAQMIKLYT 87 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCC-CCCHHHHHHHHH
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCC-CCcHHHHHHHHc
Confidence 4889999999999999999999999999999999999999999999999999999999999987 799999998765
No 22
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.79 E-value=2.3e-19 Score=156.20 Aligned_cols=128 Identities=18% Similarity=0.187 Sum_probs=98.2
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEecccccccccCCCCcccCCCcccccCceEEEeeccccccCCCcccccCC----
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQGEAFYHLDAPVIRVTG---- 76 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~~~~~~~~~~~~~~~~g---- 76 (158)
|++|+|+.|++.||++|++.++|+|||+++...+.. .......+.+..|++ ++++. +|
T Consensus 536 V~~Pad~~E~~~~l~~Ai~~~~Pv~ir~~r~~~p~~----~~~~~~~~~i~~G~~-vl~~~-------------~G~~~~ 597 (711)
T 3uk1_A 536 VWRPADTVETAVAWTYAVAHQHPSCLIFSRQNLAFN----ARTDAQLANVEKGGY-VLRDW-------------DEEIVA 597 (711)
T ss_dssp EECCSSHHHHHHHHHHHHHSSSCEEEECCSSEECCC----CCCHHHHHHGGGSSE-EEECC-------------CSSCCS
T ss_pred EEecCCHHHHHHHHHHHHhcCCCEEEEeeCCCCCCC----CCccccccccCCCeE-EEEec-------------CCCCCC
Confidence 589999999999999999999999999765432210 000000134566775 66641 15
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH--HHHHHhCC-CeEEEEeCCcCCCChHHHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET--ITKSVMKT-NYLISVEGGWPQCGIGSEI 147 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~--l~~~~~~~-~~vvvvEe~~~~GG~g~~i 147 (158)
.|++||++|+++..|++|++.|+++||+++|||+++++|||++. +.+.+.+. ..+|++|++. .+|+++.+
T Consensus 598 ~dvtiia~G~~v~~al~Aa~~L~~~GI~~~Vid~~si~plD~~~~~~~~sv~~~~~~~V~vE~~~-~~g~~~~~ 670 (711)
T 3uk1_A 598 RKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGV-TDFWRKYV 670 (711)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHTTEEEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSC-SGGGHHHH
T ss_pred CCEEEEEecHHHHHHHHHHHHHHHcCCCeEEEecCcCCccchhHHHHHHHhhccCCeEEEEeCCc-cccHHHHh
Confidence 79999999999999999999999999999999999999999985 45555544 4699999988 46787654
No 23
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=99.75 E-value=9.5e-20 Score=149.40 Aligned_cols=82 Identities=21% Similarity=0.293 Sum_probs=0.0
Q ss_pred cccccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHH
Q psy7291 70 PVIRVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISA 149 (158)
Q Consensus 70 ~~~~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~ 149 (158)
+.+..+|.|++||++|+++..+++|++.|+++|++++|+++++++|||.+.|.++++++++|+|+||+. ||++++|.+
T Consensus 285 ~~~~~~g~dv~iva~G~~~~~~~eA~~~L~~~Gi~v~vi~~r~~~Pld~~~i~~~~~~~~~vvvvEe~~--G~l~~~v~~ 362 (395)
T 1yd7_A 285 ETYELEDAEIGVVATGIVARSALRAVKMLREEGIKAGLLKIETIWPFDFELIERIAERVDKLYVPEMNL--GQLYHLIKE 362 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCCCCCEEEEEECccHHHHHHHHHHHHHcCCceEEEEeCeecCCCHHHHHHHHhcCCEEEEEeCCc--hHHHHHHHH
Confidence 344455789999999999999999999999999999999999999999999999999999999999997 999999998
Q ss_pred HHHc
Q psy7291 150 RIME 153 (158)
Q Consensus 150 ~l~~ 153 (158)
.+.+
T Consensus 363 ~~~~ 366 (395)
T 1yd7_A 363 GANG 366 (395)
T ss_dssp ----
T ss_pred HhcC
Confidence 8764
No 24
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.73 E-value=6.3e-18 Score=146.34 Aligned_cols=123 Identities=18% Similarity=0.174 Sum_probs=94.4
Q ss_pred CcccCCHHHHHHHHHHHHh-CCCcEEEEecccccccccCCCCcccCCC---cccccCceEEEeeccccccCCCcccccCC
Q psy7291 1 VVSPYNSEDAKGLLKAAIR-DPDPVVFLENELLYGVQYPMGDEALSKD---FVLPIGKAKVEKQGEAFYHLDAPVIRVTG 76 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~-~~~P~~iR~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~vl~~~~~~~~~~~~~~~~~g 76 (158)
|++|+|+.|++.|+++|++ .++|++||+++... |. ..... ..+..|+ +++++. +|
T Consensus 491 V~~Pad~~e~~~~l~~A~~~~~~Pv~ir~~r~~~----p~---~~~~~~~~~~~~~G~-~vl~~~-------------~g 549 (663)
T 3kom_A 491 VWRPADTIETMIAWKEAVKSKDTPSVMVLTRQNL----MP---VVQTQHQVANIARGG-YLVKDN-------------PD 549 (663)
T ss_dssp EECCCSHHHHHHHHHHHHHCSSCCEEEECCSSEE----CC---CCCCHHHHHHHTTTC-EEEECC-------------TT
T ss_pred EEeeCCHHHHHHHHHHHHHhCCCCEEEEccCccC----CC---cCccccchhcccCce-EEEEec-------------CC
Confidence 5899999999999999999 69999999764322 11 11111 2345563 566651 16
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH--HHH-HHhCCCeEEEEeCCcCCCChHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET--ITK-SVMKTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~--l~~-~~~~~~~vvvvEe~~~~GG~g~ 145 (158)
.|++||++|+++..|++|++.|+++|++++|||+++++|||.+. +++ +++....++++|++.. .|+.+
T Consensus 550 ~dvtiia~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~si~p~D~~~~~~~~~vl~~~~~~v~vE~~~~-~g~~~ 620 (663)
T 3kom_A 550 AKLTIVATGSEVELAVKVANEFEKKGIKLNVASIPCVEVFATQAHEYKKTVIKDDIPAVFVEMAQP-DMWYK 620 (663)
T ss_dssp CSCEEEECTTHHHHHHHHHHHHHHTTCCCEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-GGGGG
T ss_pred CCEEEEEecHHHHHHHHHHHHHHhcCCCeEEEEcCcCCcccccHHHHHHHhcCCCCeEEEEecCCc-ccHHH
Confidence 79999999999999999999999999999999999999999986 444 4555567999999773 45543
No 25
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.55 E-value=1.7e-15 Score=134.47 Aligned_cols=131 Identities=13% Similarity=0.163 Sum_probs=99.1
Q ss_pred CcccCCHHHHHHHHHHHHhC-CCc----EEEEecccc--cccccCCCCcccCCC-cccccCceEEEeeccccccCCCccc
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD-PDP----VVFLENELL--YGVQYPMGDEALSKD-FVLPIGKAKVEKQGEAFYHLDAPVI 72 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~-~~P----~~iR~~~~~--~~~~~~~~~~~~~~~-~~~~~g~~~vl~~~~~~~~~~~~~~ 72 (158)
|++|+|+.|++.|+++|++. ++| ++||+++.. +.. | .+.... ..+ +|+++++++..
T Consensus 657 V~~Pada~E~~~~l~~al~~~~gP~~e~v~i~~~r~~~~~~~--p---~~~~~~~~~~-~gga~vlr~g~---------- 720 (886)
T 2qtc_A 657 SYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHM--P---AMPEGAEEGI-RKGIYKLETIE---------- 720 (886)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHSTTCCCCEEEEECCSCCBCC--C---CCCTTCHHHH-HHTCEEEEEEC----------
T ss_pred EEecCCHHHHHHHHHHHHHhcCCCCCceEEEEEeCCccccCC--C---CCCcchhhhc-cCceEEEEecC----------
Confidence 58999999999999999985 789 999987532 211 1 111111 223 68899998710
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhC-CCcEEEEEeccccCCCHHH-------------------HHHHHhCCCeEE
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQ-GIDAEVINLRSLRPLDIET-------------------ITKSVMKTNYLI 132 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~-gi~~~vi~~~~l~Pld~~~-------------------l~~~~~~~~~vv 132 (158)
..+.|++||++|+++..|++|++.|+++ |++++||++++++|||++. +.+.+.. ..+|
T Consensus 721 -~~~~dVtLia~G~~v~~al~AAe~L~~e~GI~a~Vvd~~sl~pLD~e~i~~~kt~rl~p~~~~~~~~~e~~l~~-~~vV 798 (886)
T 2qtc_A 721 -GSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMND-APAV 798 (886)
T ss_dssp -CSSEEEEEEECGGGHHHHHHHHHHHHHHHCEEEEEEECSCHHHHHHHHHHHHHHHHHCTTSCCCCCHHHHHCCS-SCEE
T ss_pred -CCCCCEEEEeCcHHHHHHHHHHHHHhhhhCCceEEEECCcCcccchHHHHHhhhcccCccccccHHHHHHhcCC-CCEE
Confidence 0027999999999999999999999998 9999999999999999874 4555555 6788
Q ss_pred EEeCCcCCCChHHHHHHHH
Q psy7291 133 SVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 133 vvEe~~~~GG~g~~i~~~l 151 (158)
++|++.. |+++.+..++
T Consensus 799 a~ed~~~--g~~~~~~~~~ 815 (886)
T 2qtc_A 799 ASTDYMK--LFAEQVRTYV 815 (886)
T ss_dssp EECSSCT--HHHHTTGGGC
T ss_pred EEEeccc--chHHHHHHHc
Confidence 8898775 6776655444
No 26
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.47 E-value=8.7e-15 Score=128.63 Aligned_cols=136 Identities=10% Similarity=0.085 Sum_probs=99.7
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe-cccccccccCCCCcccCCCc---ccccCceEEE---eeccccccCCCcccc
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE-NELLYGVQYPMGDEALSKDF---VLPIGKAKVE---KQGEAFYHLDAPVIR 73 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~-~~~~~~~~~~~~~~~~~~~~---~~~~g~~~vl---~~~~~~~~~~~~~~~ 73 (158)
|+.|+|+.|+..+++.|++.++|+++|. +|...+. +..... .+..|++.+. ++..
T Consensus 595 V~~PaDanet~~a~~~al~~~~~~~v~v~sRq~~p~-------~~~~~~a~~~~~~G~~v~~~as~d~~----------- 656 (845)
T 3ahc_A 595 IYFATDANMLLAISEKCFKSTNKINAIFAGKQPAPT-------WVTLDEARAELEAGAAEWKWASNAEN----------- 656 (845)
T ss_dssp EEECCSHHHHHHHHHHHHHCBSCEEEEECCCSCEEE-------CSCHHHHHHHHHHSEEECTTTCCCSS-----------
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc-------cCCchhhhhhhcCCeEEEEeeccccc-----------
Confidence 6899999999999999999888777765 3332211 111111 3456766554 2200
Q ss_pred cCCCcEEEEEechhH-HHHHHHHHHHHhCCCcEEEEEeccc---cCCCHHHHHHHHhCCCeEEEEeCCcC--CCChHHHH
Q psy7291 74 VTGKDITIVGHSKAV-ETALDAAKILAGQGIDAEVINLRSL---RPLDIETITKSVMKTNYLISVEGGWP--QCGIGSEI 147 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~-~~a~ea~~~L~~~gi~~~vi~~~~l---~Pld~~~l~~~~~~~~~vvvvEe~~~--~GG~g~~i 147 (158)
....|++||++|+.+ .+|++|++.|+++|+++.||++..+ +|.+++.+....+..+.|+++|+|.. .||+|+.|
T Consensus 657 g~~~DVvLiAtGsev~~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i~~~gGlgsaV 736 (845)
T 3ahc_A 657 NDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVLFAYHSYAQDV 736 (845)
T ss_dssp TTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEEEEESSCHHHH
T ss_pred CCCCCEEEEEeccHHHHHHHHHHHHHHhCCCCEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcceeeecCcHHHH
Confidence 014799999999765 5599999999999999999999999 66655433223345578999999987 79999999
Q ss_pred HHHHHcC
Q psy7291 148 SARIMEI 154 (158)
Q Consensus 148 ~~~l~~~ 154 (158)
++.+.++
T Consensus 737 ~ell~~r 743 (845)
T 3ahc_A 737 RGLIYDR 743 (845)
T ss_dssp HHHTTTS
T ss_pred HHHHHhC
Confidence 9999887
No 27
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.46 E-value=5.9e-13 Score=121.72 Aligned_cols=83 Identities=14% Similarity=0.212 Sum_probs=70.0
Q ss_pred cccccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHH-hCCCeEEEEeCCcCCCC----hH
Q psy7291 70 PVIRVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSV-MKTNYLISVEGGWPQCG----IG 144 (158)
Q Consensus 70 ~~~~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~-~~~~~vvvvEe~~~~GG----~g 144 (158)
+.+..++.|++||++|+++..+.+|++.|+++|+++++|++++++|||.+.|.+++ +++++|+|+|++...|. +.
T Consensus 261 e~~g~~dAd~vIVa~Gs~~~~~~eAv~~L~~~G~kvgvl~lr~~rPfp~~~i~~~l~~~~k~i~VvE~~~~~g~~G~pl~ 340 (1231)
T 2c42_A 261 DYVGAPDAERVIVSMGSSCETIEEVINHLAAKGEKIGLIKVRLYRPFVSEAFFAALPASAKVITVLDRTKEPGAPGDPLY 340 (1231)
T ss_dssp EEEECTTCSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEEESEEESCCHHHHHHTSCTTCCEEEEEESSCCTTCSSCHHH
T ss_pred eeecCCCCCEEEEEeCHHHHHHHHHHHHHHhcCCceEEEEEEEeCCCCHHHHHHHHHhcCCEEEEEECCCCCCCCcccHH
Confidence 44445589999999999999999999999999999999999999999999999998 67799999999953332 34
Q ss_pred HHHHHHHH
Q psy7291 145 SEISARIM 152 (158)
Q Consensus 145 ~~i~~~l~ 152 (158)
.++...+.
T Consensus 341 ~dv~~al~ 348 (1231)
T 2c42_A 341 LDVCSAFV 348 (1231)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56665554
No 28
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=90.17 E-value=0.7 Score=29.44 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=49.8
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh---C--CCeEEEEeCCcCCCChH-HHHHHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM---K--TNYLISVEGGWPQCGIG-SEISAR 150 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~---~--~~~vvvvEe~~~~GG~g-~~i~~~ 150 (158)
..++|.+. +.+..+.+|.+.|++.|+....+|+.. |.+...++.+ + +-.+|++.++...+|+. .+|.+.
T Consensus 4 a~I~vYs~-~~Cp~C~~aK~~L~~~gi~y~~idi~~----d~~~~~~~~~~~~G~~tVP~I~i~Dg~~l~~~~~~el~~~ 78 (92)
T 2lqo_A 4 AALTIYTT-SWCGYCLRLKTALTANRIAYDEVDIEH----NRAAAEFVGSVNGGNRTVPTVKFADGSTLTNPSADEVKAK 78 (92)
T ss_dssp SCEEEEEC-TTCSSHHHHHHHHHHTTCCCEEEETTT----CHHHHHHHHHHSSSSSCSCEEEETTSCEEESCCHHHHHHH
T ss_pred CcEEEEcC-CCCHhHHHHHHHHHhcCCceEEEEcCC----CHHHHHHHHHHcCCCCEeCEEEEeCCEEEeCCCHHHHHHH
Confidence 45777665 667788888899999999999999875 4444333332 1 23567776666566764 577777
Q ss_pred HHcC
Q psy7291 151 IMEI 154 (158)
Q Consensus 151 l~~~ 154 (158)
|.+.
T Consensus 79 L~el 82 (92)
T 2lqo_A 79 LVKI 82 (92)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 29
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=86.10 E-value=1.8 Score=28.08 Aligned_cols=68 Identities=10% Similarity=0.039 Sum_probs=45.9
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCChHH
Q psy7291 76 GKDITIVGHS----KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 76 g~~~~ii~~G----~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~g~ 145 (158)
..+++|.+.| +.+..+.+|.+.|.+.|+....+++..- |--.+.+.+... .+-..+++... ..||+..
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~ifi~g~-~iGG~d~ 89 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLYIGGE-FFGGCDI 89 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEEETTE-EEECHHH
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEEECCE-EEeCHHH
Confidence 5689999988 4789999999999999999999988641 111123333322 22345667654 4688854
No 30
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=84.60 E-value=1.5 Score=29.95 Aligned_cols=67 Identities=16% Similarity=0.094 Sum_probs=45.3
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCChH
Q psy7291 76 GKDITIVGHS----KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGIG 144 (158)
Q Consensus 76 g~~~~ii~~G----~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~g 144 (158)
..+++|.++| +.+..+.+|.+.|.+.|+....+++.. .|--.+.+.+... .+-..|++... ..||+.
T Consensus 34 ~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~-d~~~~~~L~~~~G~~tvP~VfI~G~-~iGG~d 105 (135)
T 2wci_A 34 ENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ-NPDIRAELPKYANWPTFPQLWVDGE-LVGGCD 105 (135)
T ss_dssp HCSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEETTE-EEESHH
T ss_pred cCCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC-CHHHHHHHHHHHCCCCcCEEEECCE-EEEChH
Confidence 3579999998 788899999999999999999999875 2211123333322 12245666644 468884
No 31
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=82.72 E-value=12 Score=27.55 Aligned_cols=58 Identities=19% Similarity=0.215 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 91 ALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 91 a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
+.++.+.+++.|.++.++++.. .+|.+...+.+..++.||+.=--+ .+++...+..++
T Consensus 49 ~~~~~~~l~~~g~ev~~~dL~~--~~Dv~~~~~~l~~aD~iv~~~P~y-~~~~p~~lK~~i 106 (218)
T 3rpe_A 49 TNVAADFLRESGHQVKITTVDQ--GYDIESEIENYLWADTIIYQMPAW-WMGEPWILKKYI 106 (218)
T ss_dssp HHHHHHHHHHTTCCEEEEEGGG--CCCHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEEECCC--ccCHHHHHHHHHhCCEEEEECChH-hccCCHHHHHHH
Confidence 4455667788899999999985 778887778888888888886655 677766665554
No 32
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=80.75 E-value=9.3 Score=30.84 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=49.1
Q ss_pred cEEEEEechhHH----HHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 78 DITIVGHSKAVE----TALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 78 ~~~ii~~G~~~~----~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
+-++|.|+||.+ .|...++.|.++|+.+.++++.-+..-|...+.+-+.+++.|++-=-.+ .|++-..+..+|
T Consensus 266 ~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGspT~-~~~~~p~~~~~l 342 (410)
T 4dik_A 266 GKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTY-EAEIHPLMRFTL 342 (410)
T ss_dssp TEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECCT-TSSSCHHHHHHH
T ss_pred cceeeEEecccChHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeCCc-CCcCCHHHHHHH
Confidence 355666777654 4555566788889998888888777777666666666777777766554 577655444443
No 33
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=80.24 E-value=7.3 Score=27.33 Aligned_cols=67 Identities=13% Similarity=0.075 Sum_probs=43.3
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHH-------------HHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIE-------------TITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~-------------~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
|.+-..+..+++.+++.|..+.++++... +.+.- ...+.+..++.|++.=--+ .|++...+..++
T Consensus 17 g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~~~~~~~lk~~l 94 (200)
T 2a5l_A 17 GATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTR-FGNMASPLKYFL 94 (200)
T ss_dssp SHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHHHTCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred ChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHHHHCCEEEEEcChh-ccCccHHHHHHH
Confidence 44445556666778888999999998764 22110 1134456778888776655 578877777776
Q ss_pred Hc
Q psy7291 152 ME 153 (158)
Q Consensus 152 ~~ 153 (158)
..
T Consensus 95 d~ 96 (200)
T 2a5l_A 95 DG 96 (200)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 34
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=80.17 E-value=3.6 Score=26.79 Aligned_cols=68 Identities=12% Similarity=0.034 Sum_probs=45.3
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCChHH
Q psy7291 76 GKDITIVGHS----KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 76 g~~~~ii~~G----~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~g~ 145 (158)
...++|.+-| +.+..+.+|.+.|.+.|++...+++.. .|--.+.+.+... .+-..+++... ..||+..
T Consensus 15 ~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~-d~~~~~~l~~~~g~~tvP~ifi~g~-~iGG~d~ 87 (111)
T 3zyw_A 15 AAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS-DEEVRQGLKAYSSWPTYPQLYVSGE-LIGGLDI 87 (111)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEETTE-EEECHHH
T ss_pred cCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC-CHHHHHHHHHHHCCCCCCEEEECCE-EEecHHH
Confidence 5679999887 677889999999999999999998875 2211122333322 23346667654 4688753
No 35
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=79.57 E-value=8.9 Score=28.71 Aligned_cols=63 Identities=17% Similarity=0.179 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccccCCC---------HHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHc
Q psy7291 89 ETALDAAKILAGQGIDAEVINLRSLRPLD---------IETITKSVMKTNYLISVEGGWPQCGIGSEISARIME 153 (158)
Q Consensus 89 ~~a~ea~~~L~~~gi~~~vi~~~~l~Pld---------~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~ 153 (158)
..+..+++.+++.|..+.++++.-+ |+. .+.+.+.+...+.||++=--+ .|++...+..++-.
T Consensus 52 ~La~~~~~~l~~~g~eve~idL~~~-pl~~~d~~~~d~~~~l~~~i~~AD~iI~~sP~Y-n~sipa~LKn~iD~ 123 (247)
T 2q62_A 52 LLAEEARRLLEFFGAEVKVFDPSGL-PLPDAAPVSHPKVQELRELSIWSEGQVWVSPER-HGAMTGIMKAQIDW 123 (247)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCTTC-CCTTSSCTTSHHHHHHHHHHHHCSEEEEEEECS-SSSCCHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCCEEEEEEhhcC-CCCcCCCCCCHHHHHHHHHHHHCCEEEEEeCCC-CCCccHHHHHHHHH
Confidence 3444466777778999999999874 432 244566677788888887766 78888888777643
No 36
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=79.38 E-value=6.5 Score=27.89 Aligned_cols=66 Identities=15% Similarity=0.105 Sum_probs=43.4
Q ss_pred hHHHHHHHHHH-HHhCCCcEEEEEeccccC--------C--CHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHc
Q psy7291 87 AVETALDAAKI-LAGQGIDAEVINLRSLRP--------L--DIETITKSVMKTNYLISVEGGWPQCGIGSEISARIME 153 (158)
Q Consensus 87 ~~~~a~ea~~~-L~~~gi~~~vi~~~~l~P--------l--d~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~ 153 (158)
+...+..+++. |++.|.++.++++.-+.. . +.+.+.+.+..++.|++.=--+ .|++...+..++-.
T Consensus 18 t~~la~~i~~~~l~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~y-~~~~p~~lK~~ld~ 94 (197)
T 2vzf_A 18 TAKLAEYALAHVLARSDSQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPIY-KASYTGLLKAFLDI 94 (197)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCcc-CCCCCHHHHHHHHh
Confidence 44445555677 788899999999876421 1 2233455566778888777666 68887777777643
No 37
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=78.07 E-value=5.4 Score=24.24 Aligned_cols=60 Identities=17% Similarity=0.120 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHH---HHHHHHhC------CCeEEEEeCCcCCCChHHH
Q psy7291 87 AVETALDAAKILAGQGIDAEVINLRSLRP-LDIE---TITKSVMK------TNYLISVEGGWPQCGIGSE 146 (158)
Q Consensus 87 ~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~---~l~~~~~~------~~~vvvvEe~~~~GG~g~~ 146 (158)
.+..+.+|.+.|++.|++...+++..... -+.+ .+.+.... +-..++++++...||+...
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l 82 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQL 82 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHH
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHH
Confidence 56788888889999999999999975321 2333 34433322 2246777556668998653
No 38
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=77.64 E-value=2.7 Score=27.01 Aligned_cols=67 Identities=12% Similarity=0.115 Sum_probs=43.6
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCChH
Q psy7291 76 GKDITIVGHS----KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGIG 144 (158)
Q Consensus 76 g~~~~ii~~G----~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~g 144 (158)
..+++|.+.| +.+..+.+|.+.|++.|+....+++.. .|--.+.+.+... ..-.+++++.. ..||+.
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~-~~~~~~~l~~~~g~~~vP~ifi~g~-~igG~d 85 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE-DEEVRQGLKTFSNWPTYPQLYVRGD-LVGGLD 85 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS-CHHHHHHHHHHHSCCSSCEEECSSS-EEECHH
T ss_pred cCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC-CHHHHHHHHHHhCCCCCCEEEECCE-EEcCHH
Confidence 4578999888 677788888889999999999999875 2211122333322 22235556544 478874
No 39
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=76.64 E-value=8.6 Score=27.58 Aligned_cols=65 Identities=8% Similarity=0.152 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCH----------HHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 86 KAVETALDAAKILAGQGIDAEVINLRSLRPLDI----------ETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~----------~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
|....+.+++..+.+.+..++++++.-+-.|+. +.+.+.+..++.+|++=--+ +|++...+.+++
T Consensus 16 S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPeY-n~s~pg~LKn~i 90 (190)
T 3u7r_A 16 SLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEY-NRSYPGMIKNAI 90 (190)
T ss_dssp CHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCCB-TTBCCHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechhh-cccCCHHHHHHH
Confidence 444555556666666788999999876533332 23667788888888887766 678776665544
No 40
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=75.86 E-value=7.7 Score=25.56 Aligned_cols=42 Identities=17% Similarity=0.174 Sum_probs=35.9
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK 127 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~ 127 (158)
-+.+..+.+|.+.|++.|+...++++.. .|.+.+.+.++++.
T Consensus 7 ~~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~el~~~l~~ 48 (120)
T 3l78_A 7 SPSCTSCRKARAWLNRHDVVFQEHNIMT-SPLSRDELLKILSY 48 (120)
T ss_dssp CSSCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcCCCeEEEeccc-CCCcHHHHHHHHhh
Confidence 3567889999999999999999999986 78899988888763
No 41
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=75.76 E-value=11 Score=27.45 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=42.8
Q ss_pred CCcEEEEEechhH----HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 76 GKDITIVGHSKAV----ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 76 g~~~~ii~~G~~~----~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
++++++|.|++.. .....+.+.+++-|.++.++++.. -+.+.+.+.+...+.|++ .||=...+...|
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~---~~~~~~~~~l~~ad~I~l------~GG~~~~l~~~L 97 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIAT---ESLGEITTKLRKNDFIYV------TGGNTFFLLQEL 97 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTT---SCHHHHHHHHHHSSEEEE------CCSCHHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecC---CChHHHHHHHHhCCEEEE------CCCCHHHHHHHH
Confidence 6889999998752 234444555666688877776554 344555666777776665 344333444455
Q ss_pred HcC
Q psy7291 152 MEI 154 (158)
Q Consensus 152 ~~~ 154 (158)
.+.
T Consensus 98 ~~~ 100 (206)
T 3l4e_A 98 KRT 100 (206)
T ss_dssp HHH
T ss_pred HHC
Confidence 443
No 42
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=75.59 E-value=14 Score=26.43 Aligned_cols=59 Identities=10% Similarity=0.027 Sum_probs=42.8
Q ss_pred HHHHHHHhCCCcEEEEEeccccC---CCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 93 DAAKILAGQGIDAEVINLRSLRP---LDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 93 ea~~~L~~~gi~~~vi~~~~l~P---ld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
..++.+++.|..+.++++.-..| .|.+.+.+.+..++.||+.=--+ .+++...+..++-
T Consensus 21 ~l~~~~~~~g~ev~~~dL~~~~~~~~~dv~~~~~~l~~AD~iv~~~P~y-~~~~pa~lK~~iD 82 (192)
T 3f2v_A 21 HWSDAVRQHTDRFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFPIY-WFNCPPLLKQWLD 82 (192)
T ss_dssp HHHHHHTTCTTTEEEEEHHHHCTTCCCCHHHHHHHHHTSSSEEEEEECB-TTBCCHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEEchhcCCCCchhHHHHHHHHHhCCEEEEEcChh-hcCCCHHHHHHHH
Confidence 34456667788899999988765 45556667777888888886666 6787777766654
No 43
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=75.45 E-value=6.9 Score=27.35 Aligned_cols=56 Identities=13% Similarity=0.183 Sum_probs=40.0
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhC---CCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCC
Q psy7291 78 DITIVGHSKAV----ETALDAAKILAGQ---GIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGG 137 (158)
Q Consensus 78 ~~~ii~~G~~~----~~a~ea~~~L~~~---gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~ 137 (158)
+++|+++|+.. .....+++.|+++ .-++.+++..+. ++ + +...+..++++++|+--
T Consensus 2 ~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p~~v~vid~gt~-~~--~-l~~~l~~~d~lIiVDA~ 64 (162)
T 1cfz_A 2 RILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA-GM--E-LLGDMANRDHLIIADAI 64 (162)
T ss_dssp CEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETC-CG--G-GHHHHSSCSEEEEEEEC
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCCCCeEEEECCCC-HH--H-HHHHHhCCCEEEEEEeh
Confidence 47899999864 3455677777763 236899999984 33 2 34667788999999964
No 44
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=74.67 E-value=6.1 Score=26.16 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC
Q psy7291 86 KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT 128 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~ 128 (158)
+.+..+.+|.+.|++.|+.+..+++.. .|...+.|.++++..
T Consensus 11 ~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~ 52 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDLAWDYDAIDIKK-NPPAASLIRNWLENS 52 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEETTT-SCCCHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHcCCceEEEEecc-CchhHHHHHHHHHHc
Confidence 567889999999999999999999987 899999998888754
No 45
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=74.32 E-value=3.3 Score=29.04 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=24.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
-|++||+-|+.--. ++-.|.+.|+++.|++-
T Consensus 3 ~dV~IIGaGpaGL~---aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAGLS---AAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHHHH---HHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCCEEEEEC
Confidence 47999999986544 45578888999999974
No 46
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=74.18 E-value=14 Score=24.33 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=50.9
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhCCCc-EEEEEeccccCCCHHH---HHHHHh-CCCeEEEEeCCcCCCChHH-
Q psy7291 76 GKDITIVGHS----KAVETALDAAKILAGQGID-AEVINLRSLRPLDIET---ITKSVM-KTNYLISVEGGWPQCGIGS- 145 (158)
Q Consensus 76 g~~~~ii~~G----~~~~~a~ea~~~L~~~gi~-~~vi~~~~l~Pld~~~---l~~~~~-~~~~vvvvEe~~~~GG~g~- 145 (158)
..+++|.+.+ +.+..+.+|.+.|.+.|+. ...+++.. |.+. +.+... .+-..+++.... .||+..
T Consensus 19 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~----d~~~~~~l~~~tg~~tvP~vfI~g~~-IGG~d~l 93 (118)
T 2wem_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD----DPELRQGIKDYSNWPTIPQVYLNGEF-VGGCDIL 93 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS----CHHHHHHHHHHHTCCSSCEEEETTEE-EESHHHH
T ss_pred cCCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC----CHHHHHHHHHHhCCCCcCeEEECCEE-EeChHHH
Confidence 4679999998 4788999999999999994 99998864 3332 333221 233566776544 689853
Q ss_pred -------HHHHHHHcCCC
Q psy7291 146 -------EISARIMEIPY 156 (158)
Q Consensus 146 -------~i~~~l~~~~~ 156 (158)
.+...|.+.|.
T Consensus 94 ~~l~~~G~L~~~L~~~g~ 111 (118)
T 2wem_A 94 LQMHQNGDLVEELKKLGI 111 (118)
T ss_dssp HHHHHHSHHHHHHHHTTC
T ss_pred HHHHHCCCHHHHHHHcCC
Confidence 44455665554
No 47
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=74.00 E-value=17 Score=25.30 Aligned_cols=68 Identities=13% Similarity=0.200 Sum_probs=43.9
Q ss_pred chhHHHHHHHHHHHHhC------CCcEEEEEecc--ccCCCH--------------------HHHHHHHhCCCeEEEEeC
Q psy7291 85 SKAVETALDAAKILAGQ------GIDAEVINLRS--LRPLDI--------------------ETITKSVMKTNYLISVEG 136 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~------gi~~~vi~~~~--l~Pld~--------------------~~l~~~~~~~~~vvvvEe 136 (158)
|.+...+...++.+++. |.++.++++.- +.|++. +.+.+.+..++.||+.=-
T Consensus 14 ~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iI~~sP 93 (191)
T 1t0i_A 14 RVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTP 93 (191)
T ss_dssp CSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHHHHHTCSEEEEEEE
T ss_pred CchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHHHHHhCCEEEEEec
Confidence 33344455556667765 68899999875 333322 235566667888888776
Q ss_pred CcCCCChHHHHHHHHHc
Q psy7291 137 GWPQCGIGSEISARIME 153 (158)
Q Consensus 137 ~~~~GG~g~~i~~~l~~ 153 (158)
-+ .+++...+..++-.
T Consensus 94 ~y-~~~~p~~lK~~iD~ 109 (191)
T 1t0i_A 94 QY-NWGYPAALKNAIDR 109 (191)
T ss_dssp CB-TTBCCHHHHHHHHT
T ss_pred eE-CCCCCHHHHHHHHH
Confidence 66 68888888777643
No 48
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=73.80 E-value=12 Score=27.41 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHHhC-CCcEEEEEeccccC---------------------CCHHHHHHHHhCCCeEEEEeCCcCCCCh
Q psy7291 86 KAVETALDAAKILAGQ-GIDAEVINLRSLRP---------------------LDIETITKSVMKTNYLISVEGGWPQCGI 143 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~~-gi~~~vi~~~~l~P---------------------ld~~~l~~~~~~~~~vvvvEe~~~~GG~ 143 (158)
.+...+..+++.|++. |.++.++++.-+.+ -|.+.+.+.+..++.||+.=--+ .|++
T Consensus 16 ~T~~la~~i~~~l~~~~g~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~AD~iI~~sP~y-~~~~ 94 (242)
T 1sqs_A 16 KTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVY-LQNV 94 (242)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHHCSEEEEEEEEC-SSSC
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHHCCEEEEEcccc-ccCC
Confidence 3444455566777776 89999999875421 12334555566778777776666 6888
Q ss_pred HHHHHHHHHc
Q psy7291 144 GSEISARIME 153 (158)
Q Consensus 144 g~~i~~~l~~ 153 (158)
...+..++-.
T Consensus 95 p~~lK~~iDr 104 (242)
T 1sqs_A 95 SVDTKNFIER 104 (242)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 8777776643
No 49
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=73.21 E-value=16 Score=26.12 Aligned_cols=59 Identities=19% Similarity=0.234 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 91 ALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 91 a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
+..+++.+++.|..+.++++.. +.|.+.+.+.+..++.||+.=--+ .+++...+..++-
T Consensus 36 ~~~~~~~~~~~g~~v~~~dL~~--~~d~~~~~~~l~~AD~iV~~~P~y-~~s~pa~LK~~iD 94 (204)
T 2amj_A 36 TEVADGTLRDLGHDVRIVRADS--DYDVKAEVQNFLWADVVIWQMPGW-WMGAPWTVKKYID 94 (204)
T ss_dssp HHHHHHHHHHTTCEEEEEESSS--CCCHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEeCCc--cccHHHHHHHHHhCCEEEEECCcc-ccCCCHHHHHHHH
Confidence 3345566777789999999874 567777788888888888887666 6788777766654
No 50
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=73.15 E-value=7.4 Score=25.31 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh
Q psy7291 86 KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM 126 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~ 126 (158)
+.+..+.+|.+.|++.|+....+++.. .|.+.+.+.++++
T Consensus 8 ~~C~~C~kak~~L~~~gi~~~~~di~~-~~~~~~~l~~~~~ 47 (114)
T 1rw1_A 8 KACDTMKKARTWLDEHKVAYDFHDYKA-VGIDREHLRRWCA 47 (114)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEEHHH-HCCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCceEEEeecC-CCCCHHHHHHHHH
Confidence 567889999999999999999999975 6777777766654
No 51
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=73.11 E-value=7.1 Score=25.84 Aligned_cols=43 Identities=16% Similarity=0.075 Sum_probs=36.9
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT 128 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~ 128 (158)
.+.+..+.+|.+.|++.|+.+..+++.. .|...+.+.++++..
T Consensus 11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 11 YPACSTCQKAKKWLIENNIEYTNRLIVD-DNPTVEELKAWIPLS 53 (120)
T ss_dssp CTTCHHHHHHHHHHHHTTCCCEEEETTT-TCCCHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHcCCceEEEeccc-CcCCHHHHHHHHHHc
Confidence 4577899999999999999999999987 788999888887743
No 52
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=70.95 E-value=6.2 Score=26.17 Aligned_cols=44 Identities=11% Similarity=0.274 Sum_probs=37.6
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCC
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTN 129 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~ 129 (158)
-+.+..+.+|.+.|++.|+.+..+++.. .|...+.+.++++..+
T Consensus 12 ~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 55 (121)
T 3rdw_A 12 NPRCSKSRETLALVEQQGITPQVVLYLE-TPPSVDKLKELLQQLG 55 (121)
T ss_dssp CTTCHHHHHHHHHHHTTTCCCEEECTTT-SCCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHcCCCcEEEeecc-CCCcHHHHHHHHHhcC
Confidence 3577899999999999999999999987 8999998888887553
No 53
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=70.01 E-value=21 Score=23.58 Aligned_cols=32 Identities=19% Similarity=0.166 Sum_probs=25.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
...++|+++|.+...+ ++.|.+.|.++.+++.
T Consensus 7 ~~~viIiG~G~~G~~l---a~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLL---GEKLLASDIPLVVIET 38 (140)
T ss_dssp CSCEEEECCSHHHHHH---HHHHHHTTCCEEEEES
T ss_pred CCCEEEECcCHHHHHH---HHHHHHCCCCEEEEEC
Confidence 4579999999887764 5567778999999875
No 54
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=69.72 E-value=15 Score=24.40 Aligned_cols=61 Identities=8% Similarity=0.145 Sum_probs=33.8
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCC--CChHHHHHHHHH
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQ--CGIGSEISARIM 152 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~--GG~g~~i~~~l~ 152 (158)
|++-..|...++.|.+.|+++.++++....+-+ +. .++.|++.=-.+-. |.+-..+..++.
T Consensus 13 GnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~ 76 (148)
T 3f6r_A 13 GNTESIAQKLEELIAAGGHEVTLLNAADASAEN-------LADGYDAVLFGCSAWGMEDLEMQDDFLSLFE 76 (148)
T ss_dssp SHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTT-------TTTTCSEEEEEECEECSSSCEECHHHHHHHT
T ss_pred chHHHHHHHHHHHHHhCCCeEEEEehhhCCHhH-------hcccCCEEEEEecccCCCCCCCcHHHHHHHH
Confidence 444444555566677778888888877543321 22 45555555444433 455555555553
No 55
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=69.49 E-value=11 Score=24.71 Aligned_cols=29 Identities=24% Similarity=0.204 Sum_probs=19.4
Q ss_pred echhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 84 HSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 84 ~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
+|++-..|...++.|++.|+++.++++..
T Consensus 9 tGnT~~iA~~ia~~l~~~g~~v~~~~~~~ 37 (138)
T 5nul_A 9 TGNTEKMAELIAKGIIESGKDVNTINVSD 37 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEEhhh
Confidence 34444555555667777788888887754
No 56
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=68.91 E-value=17 Score=24.18 Aligned_cols=42 Identities=24% Similarity=0.225 Sum_probs=35.1
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK 127 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~ 127 (158)
.+.+..+.+|...|++.|+...++++.. .|...+.+.++++.
T Consensus 8 ~~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~el~~~l~~ 49 (132)
T 1z3e_A 8 SPSCTSCRKARAWLEEHEIPFVERNIFS-EPLSIDEIKQILRM 49 (132)
T ss_dssp CTTCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHcCCceEEEEccC-CCccHHHHHHHHHH
Confidence 3677889999999999999999999875 78888888887763
No 57
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=68.55 E-value=15 Score=28.16 Aligned_cols=63 Identities=14% Similarity=0.080 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccccC-------CC--HHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 89 ETALDAAKILAGQGIDAEVINLRSLRP-------LD--IETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 89 ~~a~ea~~~L~~~gi~~~vi~~~~l~P-------ld--~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
..+..+++.+++.|..+.++++.-+.. .+ ...+.+.+...+.||++=--+ .|++...+..++-
T Consensus 76 ~La~~~~~~l~~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~aSP~Y-n~sipg~LKn~ID 147 (279)
T 2fzv_A 76 LAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWCSPER-HGQITSVMKAQID 147 (279)
T ss_dssp HHHHHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEEEEEE-TTEECHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEEcCcc-ccCcCHHHHHHHH
Confidence 344556677888899999999987531 22 234566666778888877666 6888777776663
No 58
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=68.31 E-value=26 Score=27.39 Aligned_cols=57 Identities=19% Similarity=0.198 Sum_probs=39.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc-------------ccCCCHHHHHHHHhCCCeEEEEeC
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS-------------LRPLDIETITKSVMKTNYLISVEG 136 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~-------------l~Pld~~~l~~~~~~~~~vvvvEe 136 (158)
++.++|++.|.....+.++ +++.|+++-+++..- ....|.+.+.++++..+ +++.|-
T Consensus 14 ~k~IlIlG~G~~g~~la~a---a~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~d-vI~~~~ 83 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALA---AKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISD-VVTYEF 83 (389)
T ss_dssp TSEEEEECCSHHHHHHHHH---HHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCS-EEEESC
T ss_pred CCEEEEECCCHHHHHHHHH---HHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCC-Eeeecc
Confidence 7789999999866555444 455699988887532 13345667888887765 567664
No 59
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=67.54 E-value=18 Score=24.68 Aligned_cols=51 Identities=14% Similarity=0.188 Sum_probs=28.9
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCc
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGW 138 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~ 138 (158)
|++-..|...++.|.+.|+.+.++++... +.+.+..-+..++.|++.=-.+
T Consensus 12 GnT~~~A~~ia~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~d~ii~Gspty 62 (161)
T 3hly_A 12 GYSDRLSQAIGRGLVKTGVAVEMVDLRAV---DPQELIEAVSSARGIVLGTPPS 62 (161)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEEETTTC---CHHHHHHHHHHCSEEEEECCBS
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEEECCCC---CHHHHHHHHHhCCEEEEEcCCc
Confidence 33444455556667777888888877542 3333433344556666654444
No 60
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=67.36 E-value=6.9 Score=23.73 Aligned_cols=72 Identities=17% Similarity=0.210 Sum_probs=42.8
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCH----HHHHHHHh-CCCeEEEEeCCcCCCChH-HHHHHHH
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDI----ETITKSVM-KTNYLISVEGGWPQCGIG-SEISARI 151 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~----~~l~~~~~-~~~~vvvvEe~~~~GG~g-~~i~~~l 151 (158)
++.|.+. +.+..+.++...|++.|+....+++....+-+. +.+.+... ..-.++++ ++...||+. +.+.++|
T Consensus 13 ~v~ly~~-~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~-~g~~i~G~~~~~l~~~l 90 (92)
T 3ic4_A 13 EVLMYGL-STCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK-GDKHVLGYNEEKLKELI 90 (92)
T ss_dssp SSEEEEC-TTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE-TTEEEESCCHHHHHHHH
T ss_pred eEEEEEC-CCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE-CCEEEeCCCHHHHHHHh
Confidence 4555543 456777888888888899999998876544222 22322222 23346666 455578885 3455554
No 61
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=66.99 E-value=8.4 Score=25.29 Aligned_cols=49 Identities=29% Similarity=0.361 Sum_probs=37.9
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCC
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTN 129 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~ 129 (158)
++|.+. +.+..+.+|.+.|++.|+....+++.. .|.+.+.+.++++..+
T Consensus 7 i~iY~~-~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~~l~~~~~~~g 55 (120)
T 2kok_A 7 VTIYGI-KNCDTMKKARIWLEDHGIDYTFHDYKK-EGLDAETLDRFLKTVP 55 (120)
T ss_dssp EEEEEC-SSCHHHHHHHHHHHHHTCCEEEEEHHH-HCCCHHHHHHHHHHSC
T ss_pred EEEEEC-CCChHHHHHHHHHHHcCCcEEEEeeeC-CCCCHHHHHHHHHHcC
Confidence 454443 566888999999999999999999875 5888888887776543
No 62
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=66.59 E-value=12 Score=26.51 Aligned_cols=68 Identities=18% Similarity=0.199 Sum_probs=43.1
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCC-----------------CH-HHHHHHHhCCCeEEEEeCCcCCCChHHH
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPL-----------------DI-ETITKSVMKTNYLISVEGGWPQCGIGSE 146 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pl-----------------d~-~~l~~~~~~~~~vvvvEe~~~~GG~g~~ 146 (158)
|.+-..+..+++.+++.|..+.++++....|. |. ..+.+.+..++.||+.=--+ .|++...
T Consensus 18 g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ii~gsP~y-~~~~~~~ 96 (211)
T 1ydg_A 18 GTGYAMAQEAAEAGRAAGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAEAIVFSSPTR-FGGATSQ 96 (211)
T ss_dssp SHHHHHHHHHHHHHHHTTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCSEEEEEEEEE-TTEECHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEEeccccccchhhhcccccccccccccchhHHHHHHHHHCCEEEEEcCcc-ccCccHH
Confidence 44445566667778878999999998764110 10 12234455677777776555 5788777
Q ss_pred HHHHHHc
Q psy7291 147 ISARIME 153 (158)
Q Consensus 147 i~~~l~~ 153 (158)
+..++-.
T Consensus 97 lk~~ld~ 103 (211)
T 1ydg_A 97 MRAFIDT 103 (211)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 7777654
No 63
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=65.75 E-value=7.3 Score=25.73 Aligned_cols=43 Identities=16% Similarity=0.279 Sum_probs=36.7
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT 128 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~ 128 (158)
-+.+..+.+|.+.|++.|+.+..+++.. .|...+.|.++++..
T Consensus 11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 11 NPKCSKSRETLALLENQGIAPQVIKYLE-TSPSVEELKRLYQQL 53 (119)
T ss_dssp CTTCHHHHHHHHHHHHTTCCCEEECHHH-HCCCHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHcCCceEEEEecc-CcCcHHHHHHHHHHc
Confidence 3577899999999999999999999987 788998888887654
No 64
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=65.20 E-value=17 Score=24.91 Aligned_cols=55 Identities=15% Similarity=0.118 Sum_probs=30.6
Q ss_pred EEEEEechhH----HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEe
Q psy7291 79 ITIVGHSKAV----ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVE 135 (158)
Q Consensus 79 ~~ii~~G~~~----~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvE 135 (158)
-++|.|+|+. ..|...++.|.+.|+++.++++... .+...+..-+..++.|++.=
T Consensus 6 kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~d~ii~Gs 64 (159)
T 3fni_A 6 SIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAA--VDLQELRELVGRCTGLVIGM 64 (159)
T ss_dssp EEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSC--CCHHHHHHHHHTEEEEEEEC
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCc--CCHHHHHHHHHhCCEEEEEc
Confidence 3445555554 4444455667777888888877642 03333444444555555543
No 65
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=64.95 E-value=23 Score=22.86 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=18.2
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
|.+-..|...++.+.+.|..+.++++.-
T Consensus 11 GnT~~~a~~i~~~l~~~g~~v~~~~~~~ 38 (137)
T 2fz5_A 11 GNTEAMANEIEAAVKAAGADVESVRFED 38 (137)
T ss_dssp SHHHHHHHHHHHHHHHTTCCEEEEETTS
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEEEccc
Confidence 4444445555566777788888887654
No 66
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=64.29 E-value=12 Score=25.24 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=30.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
.+++++|+-|+.....+..++.|.+.+.++.++-.|+
T Consensus 18 ~~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~g~R~ 54 (142)
T 3lyu_A 18 FGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTF 54 (142)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 4679999999999999888888888787888874444
No 67
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=64.20 E-value=8.6 Score=25.32 Aligned_cols=65 Identities=17% Similarity=0.143 Sum_probs=43.7
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhCCCc---EEEEEeccccCCCHHH---HHHHHh-CCCeEEEEeCCcCCCChH
Q psy7291 76 GKDITIVGHS----KAVETALDAAKILAGQGID---AEVINLRSLRPLDIET---ITKSVM-KTNYLISVEGGWPQCGIG 144 (158)
Q Consensus 76 g~~~~ii~~G----~~~~~a~ea~~~L~~~gi~---~~vi~~~~l~Pld~~~---l~~~~~-~~~~vvvvEe~~~~GG~g 144 (158)
..+++|++.| +.+..+.+|.+.|.+.|+. +..+++.. +.+. +.+... .+-..++|.... .||+.
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~----~~~~~~~l~~~sg~~tvP~vfI~g~~-iGG~d 89 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLE----DPELREGIKEFSEWPTIPQLYVNKEF-IGGCD 89 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTT----CHHHHHHHHHHHTCCSSCEEEETTEE-EESHH
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecC----CHHHHHHHHHHhCCCCCCeEEECCEE-EecHH
Confidence 5689999998 4788899999999988988 78888753 3332 222221 223466676544 68875
Q ss_pred H
Q psy7291 145 S 145 (158)
Q Consensus 145 ~ 145 (158)
.
T Consensus 90 ~ 90 (121)
T 3gx8_A 90 V 90 (121)
T ss_dssp H
T ss_pred H
Confidence 3
No 68
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=63.84 E-value=9.6 Score=23.91 Aligned_cols=73 Identities=14% Similarity=0.146 Sum_probs=44.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH-H----hCCCeEEEEeCCcCCCChHH-HHHHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS-V----MKTNYLISVEGGWPQCGIGS-EISAR 150 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~-~----~~~~~vvvvEe~~~~GG~g~-~i~~~ 150 (158)
..++|.+ -+.+..+..+...|++.|+....+++....+-+.+.+.+. . ...-.+++++++...||+.. .|.+.
T Consensus 22 ~~v~ly~-~~~Cp~C~~ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~~~~igg~~~~~l~~~ 100 (103)
T 3nzn_A 22 GKVIMYG-LSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVGFKEKEIRES 100 (103)
T ss_dssp SCEEEEE-CSSCHHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTTEEEESCCHHHHHHH
T ss_pred CeEEEEc-CCCCchHHHHHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECCCEEEEcCCHHHHHHH
Confidence 4555544 3567888888888888899999998876543222223222 1 12235677776455788864 44443
No 69
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=63.68 E-value=17 Score=25.24 Aligned_cols=56 Identities=7% Similarity=0.051 Sum_probs=37.9
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh--CCCeEEEEeCC
Q psy7291 78 DITIVGHSKAV----ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM--KTNYLISVEGG 137 (158)
Q Consensus 78 ~~~ii~~G~~~----~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~--~~~~vvvvEe~ 137 (158)
+++|+++|+.. .....+++.|++.--++.+++..+ -|++- ...+. +++++++|+--
T Consensus 4 ~ilVlGiGN~L~gDDG~G~~v~~~L~~~~p~v~vid~Gt-~~~~l---~~~l~~~~~d~lIiVDA~ 65 (157)
T 3pu6_A 4 KKVLLCVGNELRGDDGVAIALGRLVEEQMPEWSVFFGYD-TPESE---FGKLRELAPDVIVVADAM 65 (157)
T ss_dssp CEEEEEECCTTBGGGGHHHHHHHHHHHHCTTEEEEEEET-CGGGG---HHHHHHHCCSEEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCeEEEECCC-CHHHH---HHHHHhcCCCEEEEEEec
Confidence 58999999864 234556777764323799999886 55532 33444 48899999854
No 70
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=63.63 E-value=28 Score=22.70 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=24.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
...++|+++|.+... .++.|.++|.++.+++.
T Consensus 6 ~~~v~I~G~G~iG~~---la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAGVG---LVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHHHH---HHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHHHHH---HHHHHHHCCCeEEEEEC
Confidence 457999999986554 45677778999988874
No 71
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=62.05 E-value=22 Score=23.56 Aligned_cols=74 Identities=11% Similarity=0.205 Sum_probs=47.7
Q ss_pred CCcEEEEEech----hHHHHHHHHHHHHhCCC-cEEEEEeccccCCCHHHHHHHHh---C---CCeEEEEeCCcCCCChH
Q psy7291 76 GKDITIVGHSK----AVETALDAAKILAGQGI-DAEVINLRSLRPLDIETITKSVM---K---TNYLISVEGGWPQCGIG 144 (158)
Q Consensus 76 g~~~~ii~~G~----~~~~a~ea~~~L~~~gi-~~~vi~~~~l~Pld~~~l~~~~~---~---~~~vvvvEe~~~~GG~g 144 (158)
..+++|++-|+ .+..+.+|.+.|.+.|+ ....+++.. |. .+++.+. + ...| +|.... .||.-
T Consensus 19 ~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~----~~-~~r~~l~~~sg~~TvPqI-FI~g~~-IGG~D 91 (118)
T 2wul_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD----DP-ELRQGIKDYSNWPTIPQV-YLNGEF-VGGCD 91 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTS----CH-HHHHHHHHHHTCCSSCEE-EETTEE-EECHH
T ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccC----CH-HHHHHHHHhccCCCCCeE-eECCEE-ECCHH
Confidence 46799999884 67888889999999887 578887743 22 2333332 1 3445 444333 48864
Q ss_pred H--------HHHHHHHcCCC
Q psy7291 145 S--------EISARIMEIPY 156 (158)
Q Consensus 145 ~--------~i~~~l~~~~~ 156 (158)
. ++...|.+.|+
T Consensus 92 dl~~l~~~GeL~~lL~~~Gi 111 (118)
T 2wul_A 92 ILLQMHQNGDLVEELKKLGI 111 (118)
T ss_dssp HHHHHHHHTHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHcCC
Confidence 2 45567777666
No 72
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=61.48 E-value=16 Score=22.41 Aligned_cols=65 Identities=9% Similarity=0.108 Sum_probs=38.8
Q ss_pred cEEEEEechhHHHH------HHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh---CCCeEEEEeCCcCCCChHH
Q psy7291 78 DITIVGHSKAVETA------LDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM---KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 78 ~~~ii~~G~~~~~a------~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~---~~~~vvvvEe~~~~GG~g~ 145 (158)
+++|.++ +.+..+ .+|.+.|++.|+....+|+.. .|-..+.+.+... ..-..+++.... .||+-.
T Consensus 3 ~v~ly~~-~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~-~~~~~~~l~~~~g~~~~~vP~ifi~g~~-igG~d~ 76 (93)
T 1t1v_A 3 GLRVYST-SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQ-DNALRDEMRTLAGNPKATPPQIVNGNHY-CGDYEL 76 (93)
T ss_dssp CEEEEEC-SSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTS-CHHHHHHHHHHTTCTTCCSCEEEETTEE-EEEHHH
T ss_pred CEEEEEc-CCCCCchhhHHHHHHHHHHHHCCCceEEEECCC-CHHHHHHHHHHhCCCCCCCCEEEECCEE-EeCHHH
Confidence 3555544 334445 677888889999999999875 2222233444432 122567777655 688744
No 73
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=60.62 E-value=23 Score=27.53 Aligned_cols=58 Identities=10% Similarity=0.121 Sum_probs=33.4
Q ss_pred cEEEEEechhHHH----HHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCc
Q psy7291 78 DITIVGHSKAVET----ALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGW 138 (158)
Q Consensus 78 ~~~ii~~G~~~~~----a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~ 138 (158)
..++|.|+|+.+. |..+++.|.+.|..+.++++.. .+...+.+.+..++.|++.--.+
T Consensus 252 ~~i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~d~ii~g~p~y 313 (398)
T 1ycg_A 252 AKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSV---SDRNDVIKEILDARAVLVGSPTI 313 (398)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGG---SCHHHHHHHHHHCSEEEEECCCB
T ss_pred CeEEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEECCC---CCHHHHHHHHHHCCEEEEECCcc
Confidence 4566777776544 4444556667788888887653 33344444444555555554433
No 74
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.41 E-value=14 Score=24.72 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=25.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+..++|+++|...... ++.|.+.|.++.+++..
T Consensus 3 ~~~vlI~G~G~vG~~l---a~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINT---ILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHH---HHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHH---HHHHHHCCCCEEEEECC
Confidence 4579999998877654 55677789999999864
No 75
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=59.78 E-value=46 Score=25.79 Aligned_cols=70 Identities=9% Similarity=0.093 Sum_probs=40.2
Q ss_pred cEEEEEechhHHHHHH----HHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 78 DITIVGHSKAVETALD----AAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~e----a~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
.-++|.|+|+.+...+ .++.|.+.|..++++++. ..+...+.+.+..++.|++.=-.+ .||.-..+.+++
T Consensus 253 ~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~d~ii~gsp~~-~~~~~~~~~~~l 326 (402)
T 1e5d_A 253 NKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCK---ACHHSQIMSEISDAGAVIVGSPTH-NNGILPYVAGTL 326 (402)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEECCCB-TTBCCHHHHHHH
T ss_pred CcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECCcc-CCCchHHHHHHH
Confidence 4556667776544443 445666678888888765 334444555556666666655444 455544444444
No 76
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=59.75 E-value=27 Score=24.31 Aligned_cols=60 Identities=8% Similarity=-0.047 Sum_probs=32.9
Q ss_pred chhHHHHHHHHHHHHh-CCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 85 SKAVETALDAAKILAG-QGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~-~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
|.+-..+...++.|++ .|+.+.++++... +. +.+..++.|++.=--+ .|++...+..++.
T Consensus 16 GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~---~~----~~l~~aD~ii~gsP~y-~g~~~~~lk~fld 76 (188)
T 2ark_A 16 GNTKKMAELVAEGARSLEGTEVRLKHVDEA---TK----EDVLWADGLAVGSPTN-MGLVSWKMKRFFD 76 (188)
T ss_dssp SHHHHHHHHHHHHHHTSTTEEEEEEETTTC---CH----HHHHHCSEEEEEEECB-TTBCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhcCCCeEEEEEhhhC---CH----HHHHhCCEEEEEeCcc-CCcCCHHHHHHHH
Confidence 3333445555666777 7888888877543 21 1223445555554444 5565555555544
No 77
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=58.62 E-value=33 Score=24.23 Aligned_cols=74 Identities=14% Similarity=0.063 Sum_probs=42.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCH--HHHHHHHhC-CCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDI--ETITKSVMK-TNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~--~~l~~~~~~-~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
+.-++|+|....-..+.+.+..++++|+.+-.|.- ..+=+. +.|.+++.. -+.++-.|++.+.|.-+.....++
T Consensus 78 ~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs--~~~~~~~~~~L~d~an~~p~gll~~e~g~r~g~~Sti~~~~i 154 (170)
T 3jx9_A 78 VDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL--GDVTETLERSIAPLALKFDKGLLPAEDGSRHGLPSLALGAFL 154 (170)
T ss_dssp TCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES--SCCCTTGGGSSSCEECCCCSCSEECTTSCEECCCHHHHHHHH
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC--cchhccccCcHHHHHhCCCCCceECCCCCEechhHHHHHHHH
Confidence 44455555555556688899999999988666654 122111 112222221 134788888887776655555444
No 78
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=58.59 E-value=23 Score=23.88 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=34.4
Q ss_pred ccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHcCCC
Q psy7291 113 LRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIMEIPY 156 (158)
Q Consensus 113 l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~~~~ 156 (158)
+..++.+.|..++++.+.|.+|=-+...|.+|..++..|.+.|+
T Consensus 7 ~~~m~~~~l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~ 50 (144)
T 2d59_A 7 IDGLTDEDIREILTRYKKIALVGASPKPERDANIVMKYLLEHGY 50 (144)
T ss_dssp SSCCCHHHHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCC
Confidence 34456677888886567899997666668899999999998876
No 79
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=58.35 E-value=16 Score=24.90 Aligned_cols=41 Identities=15% Similarity=0.275 Sum_probs=34.7
Q ss_pred hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC
Q psy7291 86 KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK 127 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~ 127 (158)
+.+..+.+|.+.|++.|+....+++.. .|...+.+.+.++.
T Consensus 10 p~C~~crkak~~L~~~gi~~~~idi~~-~~~~~~eL~~~~~~ 50 (141)
T 1s3c_A 10 PASGTSRNTLEMIRNSGTEPTIILYLE-NPPSRDELVKLIAD 50 (141)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECTTT-SCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCCEEEEECCC-CCccHHHHHHHhcc
Confidence 678889999999999999999999986 78888877776654
No 80
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=57.74 E-value=27 Score=27.17 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=43.4
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 78 DITIVGHSKAV----ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 78 ~~~ii~~G~~~----~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
.-++|.++|.. ..|..+++.+.+.|+.+.++++. ..+.+.+.+.+..++.|++.=-.+ .|++...+.+++
T Consensus 257 ~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~l~~~d~iiigsP~y-~~~~~~~~k~~l 330 (404)
T 2ohh_A 257 ERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLH---EDDRSEIVKDILESGAIALGAPTI-YDEPYPSVGDLL 330 (404)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEECCEE-TTEECTHHHHHH
T ss_pred CcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECccc-cccchHHHHHHH
Confidence 44556666654 44445556677778888888765 345555666667777777775544 466655555544
No 81
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=57.37 E-value=5.2 Score=26.82 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=26.6
Q ss_pred CCcEEEEEechhHH--HHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVE--TALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~--~a~ea~~~L~~~gi~~~vi~~ 110 (158)
+.|++||++|.... .--+..+.|++.||.+.+.+-
T Consensus 61 ~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 61 GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 68999999998654 234556788899998887753
No 82
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=57.03 E-value=41 Score=23.19 Aligned_cols=56 Identities=14% Similarity=0.038 Sum_probs=38.4
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhCC-CcEEEEEeccccCCCHHHHHHHHh--CCCeEEEEeCC
Q psy7291 78 DITIVGHSKAV----ETALDAAKILAGQG-IDAEVINLRSLRPLDIETITKSVM--KTNYLISVEGG 137 (158)
Q Consensus 78 ~~~ii~~G~~~----~~a~ea~~~L~~~g-i~~~vi~~~~l~Pld~~~l~~~~~--~~~~vvvvEe~ 137 (158)
+++|+++|+.. ..-..+++.|++.. -++.+++..+.- + +.+ ..+. +++++++|+--
T Consensus 5 ~~lVlGiGN~l~gDDG~G~~v~~~L~~~~~~~v~vid~gt~~-~--~l~-~~l~~~~~d~lIiVDA~ 67 (159)
T 2e85_A 5 TDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAP-E--NDI-VAIRELRPTRLLIVDAT 67 (159)
T ss_dssp CEEEEEECCGGGGGGGHHHHHHHHHHHSCCTTCEEEECTTCS-G--GGH-HHHHHHCCSEEEEEEEC
T ss_pred CEEEEEECCcccccccHHHHHHHHHhhhCCCCeEEEECCCCH-H--HHH-HHHhcCCCCEEEEEEeC
Confidence 47999999864 34566778887653 358899998853 3 223 3344 46899999964
No 83
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=56.65 E-value=43 Score=22.63 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=41.8
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH-HHhCCCeEEEEeC
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK-SVMKTNYLISVEG 136 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~-~~~~~~~vvvvEe 136 (158)
.++.||..+. ...+|.+..+.|++.|+.+.+...+.=-+|... |.+ ...+...+++|-+
T Consensus 9 ~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~k-IR~a~~~kvPy~lVVG~ 69 (130)
T 1v95_A 9 VDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQA-LEDVSRGGSPFAIVITQ 69 (130)
T ss_dssp CTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHH-HHHHHHHTCSEEEEECH
T ss_pred CeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHH-HHHHHHcCCCEEEEEec
Confidence 4677777764 568899999999999999998655433556554 444 4557777877743
No 84
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=56.60 E-value=52 Score=25.40 Aligned_cols=56 Identities=16% Similarity=0.133 Sum_probs=38.4
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC-------HHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD-------IETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld-------~~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|+..|.++..++... ++.+ ...+.++++..+.|++
T Consensus 137 l~g~tvGIiG~G~IG~~v---A~~l~~~G~~V~~~dr~~-~~~~~~~~~~~~~~l~ell~~aDiV~l 199 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGAKV---AESLQAWGFPLRCWSRSR-KSWPGVESYVGREELRAFLNQTRVLIN 199 (315)
T ss_dssp STTCCEEEECCSHHHHHH---HHHHHTTTCCEEEEESSC-CCCTTCEEEESHHHHHHHHHTCSEEEE
T ss_pred cCCCEEEEEeeCHHHHHH---HHHHHHCCCEEEEEcCCc-hhhhhhhhhcccCCHHHHHhhCCEEEE
Confidence 347899999999998765 456666788888887432 2221 1457788887765554
No 85
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=56.59 E-value=30 Score=24.06 Aligned_cols=68 Identities=12% Similarity=0.017 Sum_probs=43.6
Q ss_pred echhHHHHHHHHHHHHhCCCcEEEEEeccccCC----------C----HHHHHHHHhCCCeEEEEeCCcCCCChHHHHHH
Q psy7291 84 HSKAVETALDAAKILAGQGIDAEVINLRSLRPL----------D----IETITKSVMKTNYLISVEGGWPQCGIGSEISA 149 (158)
Q Consensus 84 ~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pl----------d----~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~ 149 (158)
+|.+-..+..+++.+++.|..+.++++....|. | ... .+.+..++.|++.=--+ .|++...+..
T Consensus 14 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~-~~~l~~aD~ii~gsP~y-~~~~~~~lk~ 91 (199)
T 2zki_A 14 YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVT-LDDMRWADGFAIGSPTR-YGNMAGGLKT 91 (199)
T ss_dssp SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGGGSTTSCBCC-HHHHHHCSEEEEEEECB-TTBCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCCccccccccc-HHHHHhCCEEEEECCcc-ccCccHHHHH
Confidence 355555566666777777899999998764111 1 112 33445677787777666 5888888877
Q ss_pred HHHc
Q psy7291 150 RIME 153 (158)
Q Consensus 150 ~l~~ 153 (158)
++-.
T Consensus 92 ~ld~ 95 (199)
T 2zki_A 92 FLDT 95 (199)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7754
No 86
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=56.53 E-value=57 Score=25.52 Aligned_cols=70 Identities=11% Similarity=0.082 Sum_probs=43.8
Q ss_pred EEEEEechhH----HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 79 ITIVGHSKAV----ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 79 ~~ii~~G~~~----~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
-++|.|||.. ..|...++.+.+.|..+.++++... +...+.+.+..++.|++.=-.+ .||+...+..++.
T Consensus 258 kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~---~~~~~~~~l~~~D~iiigsP~y-~~~~~~~~k~fld 331 (414)
T 2q9u_A 258 KVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSS---DITKVALHTYDSGAVAFASPTL-NNTMMPSVAAALN 331 (414)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGC---CHHHHHHHHHTCSEEEEECCCB-TTBCCHHHHHHHH
T ss_pred eEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcC---CHHHHHHHHHhCCEEEEEcCcc-CcCchHHHHHHHH
Confidence 4555566654 3444455667777888888887643 4444555666777777776555 5776665655553
No 87
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=55.61 E-value=9.2 Score=28.06 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=28.2
Q ss_pred CCcEEEEEechhHHH--HHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSKAVET--ALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~~~~~--a~ea~~~L~~~gi~~~vi 108 (158)
++++++.-+|+.... +.+.++.|++.|.++.+|
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv 39 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPV 39 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 678999899987766 788899999999999887
No 88
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=55.42 E-value=34 Score=23.29 Aligned_cols=41 Identities=12% Similarity=0.025 Sum_probs=27.6
Q ss_pred Eecc-ccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 109 NLRS-LRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 109 ~~~~-l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
++.+ +.+++.+.+.++++..+.++. .+...|+|..+.++++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~~l~---ps~~e~~~~~~~Ea~a 137 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDFVII---PSYFEPFGLVALEAMC 137 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSEEEE---CCSCCSSCHHHHHHHH
T ss_pred CEEEEeccCCHHHHHHHHHHCCEEEE---CCCCCCccHHHHHHHH
Confidence 4555 677888888888888765444 2223577777777775
No 89
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=54.90 E-value=22 Score=22.21 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=41.7
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCChHH
Q psy7291 76 GKDITIVGHS----KAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 76 g~~~~ii~~G----~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~g~ 145 (158)
...++|.+.| +.+..+..+...|.+.++.+..+++.. .|--.+.+.+... ..-..+++ ++...||+..
T Consensus 16 ~~~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~-~~~~~~~l~~~~g~~~vP~v~i-~g~~igg~d~ 88 (105)
T 2yan_A 16 KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE-DEEVRQGLKAYSNWPTYPQLYV-KGELVGGLDI 88 (105)
T ss_dssp SSSEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEE-TTEEEECHHH
T ss_pred cCCEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC-CHHHHHHHHHHHCCCCCCeEEE-CCEEEeChHH
Confidence 3468888776 567788888888888899999998875 2211122333332 12234455 4555788854
No 90
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=54.65 E-value=43 Score=23.75 Aligned_cols=59 Identities=14% Similarity=0.164 Sum_probs=37.6
Q ss_pred cEEEEEechh---HHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC-----CCeEEEEeCCc
Q psy7291 78 DITIVGHSKA---VETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK-----TNYLISVEGGW 138 (158)
Q Consensus 78 ~~~ii~~G~~---~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~-----~~~vvvvEe~~ 138 (158)
+++|+.+|.. -....++++.+++.|+.+.+|.+..-.. +.+ +..+++. ...++++-++.
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~-~~~-l~~la~~~n~~~~s~~~~~~~~~ 174 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQN-ESA-LQHFIDAANSSDSCHLVSIPPSP 174 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC----CH-HHHHHHHHCSTTCCEEEEECCCS
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCc-cHH-HHHHHHhccCCCceEEEEecCcc
Confidence 4566655533 3567788899999999999999887433 334 5555553 24666666554
No 91
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=54.54 E-value=29 Score=24.00 Aligned_cols=67 Identities=9% Similarity=0.036 Sum_probs=41.6
Q ss_pred echhHHHHHHHHHHHHh-CCCcEEEEEeccccCCCHHHH--------------HHHHhCCCeEEEEeCCcCCCChHHHHH
Q psy7291 84 HSKAVETALDAAKILAG-QGIDAEVINLRSLRPLDIETI--------------TKSVMKTNYLISVEGGWPQCGIGSEIS 148 (158)
Q Consensus 84 ~G~~~~~a~ea~~~L~~-~gi~~~vi~~~~l~Pld~~~l--------------~~~~~~~~~vvvvEe~~~~GG~g~~i~ 148 (158)
+|.+-..+..+++.+++ .|.++.++++.-..| .... .+.+..++.|++.=--+ .|++...+.
T Consensus 12 ~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~~~~~~~lk 88 (198)
T 3b6i_A 12 YGHIETMARAVAEGASKVDGAEVVVKRVPETMP--PQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTR-FGNMSGQMR 88 (198)
T ss_dssp SSHHHHHHHHHHHHHHTSTTCEEEEEECCCCSC--HHHHHHTTCCCCCSCBCCGGGGGGCSEEEEEEEEE-TTEECHHHH
T ss_pred CcHHHHHHHHHHHHHhhcCCCEEEEEEccccCc--hhhhhhcccccccCchhhHHHHHHCCEEEEEeChh-cCCchHHHH
Confidence 35555556666777887 799999999876422 1110 23345667777666555 677777776
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
.++..
T Consensus 89 ~~ld~ 93 (198)
T 3b6i_A 89 TFLDQ 93 (198)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 66643
No 92
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=54.47 E-value=70 Score=24.43 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=33.3
Q ss_pred HhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeC-CcCCCChH--HHHHHHHHcCCC
Q psy7291 99 AGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEG-GWPQCGIG--SEISARIMEIPY 156 (158)
Q Consensus 99 ~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~~ 156 (158)
+..|..+..+++..-..+|.+.+.+.+. ...++++++. +++.|-.- ..|.+...++|.
T Consensus 106 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 167 (416)
T 3isl_A 106 ERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDA 167 (416)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTC
T ss_pred HhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCC
Confidence 3446666666655444567777777775 2335666665 44444332 566666666553
No 93
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=54.47 E-value=19 Score=24.21 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=24.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
+..++|++.|.+...+ ++.|.+.|.++.+++.
T Consensus 19 ~~~v~IiG~G~iG~~l---a~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLI---ANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHH---HHHHHHTTCEEEEEES
T ss_pred CCcEEEECCCHHHHHH---HHHHHhCCCeEEEEEC
Confidence 6789999999887664 4456667888888864
No 94
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=54.39 E-value=10 Score=29.57 Aligned_cols=27 Identities=26% Similarity=0.557 Sum_probs=24.7
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
|+.|.+.+|+.+++++|.+++.|+.+|
T Consensus 52 vv~P~s~eev~~~l~~a~~~~~pv~~~ 78 (326)
T 1hsk_A 52 YITPTKNEEVQAVVKYAYQNEIPVTYL 78 (326)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 468999999999999999888999987
No 95
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=54.20 E-value=37 Score=23.86 Aligned_cols=60 Identities=8% Similarity=0.117 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeccccCCCH----------HHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 90 TALDAAKILAGQGIDAEVINLRSLRPLDI----------ETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 90 ~a~ea~~~L~~~gi~~~vi~~~~l~Pld~----------~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
.+..+++.++ .|..+.++++.-+..++. +.+.+.+..++.||+.=--+ .+++...+..++
T Consensus 21 la~~~~~~~~-~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y-~~~~p~~lK~~i 90 (192)
T 3fvw_A 21 LAKKAETIIG-DRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPVY-NYAIPGPVKNLL 90 (192)
T ss_dssp HHHHHHHHHT-TSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEEECCCB-TTBCCHHHHHHH
T ss_pred HHHHHHHhcC-CCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEEECccc-ccCCCHHHHHHH
Confidence 3444455565 688899999876422222 34666777888888887666 678877666554
No 96
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=53.61 E-value=17 Score=25.42 Aligned_cols=56 Identities=9% Similarity=0.231 Sum_probs=34.2
Q ss_pred HHHHHhCCCcEEEEEeccccCCCH-----------HHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 95 AKILAGQGIDAEVINLRSLRPLDI-----------ETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 95 ~~~L~~~gi~~~vi~~~~l~Pld~-----------~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
++.++ .|.++.++++.-+..++. +.+.+.+..++.||+.=--+ .+++...+..++-
T Consensus 30 ~~~l~-~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~sP~y-~~~~p~~lK~~iD 96 (193)
T 1rtt_A 30 IGLVP-PGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLFATPEY-NYSMAGVLKNAID 96 (193)
T ss_dssp HTTCC-TTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEEECCEE-TTEECHHHHHHHH
T ss_pred HHhcc-CCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcccc-ccCcCHHHHHHHH
Confidence 33344 578899999877433321 23455566777777776555 5677666665553
No 97
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=53.03 E-value=31 Score=19.89 Aligned_cols=71 Identities=14% Similarity=0.128 Sum_probs=38.7
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCChHHHHHHHHHc
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGIGSEISARIME 153 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~g~~i~~~l~~ 153 (158)
+.+.+ -+.+..+.++...|++.|+.+..+++.. .|-..+.+.+... ..-.++++ ++...||+ ..|.+++.+
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~~~i~~~~~~i~~-~~~~~~~~~~~~~~~~vP~l~~-~g~~i~g~-~~i~~~~~~ 74 (82)
T 1fov_A 3 VEIYT-KETCPYCHRAKALLSSKGVSFQELPIDG-NAAKREEMIKRSGRTTVPQIFI-DAQHIGGY-DDLYALDAR 74 (82)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHHTCCCEEEECTT-CSHHHHHHHHHHSSCCSCEEEE-TTEEEESH-HHHHHHHHT
T ss_pred EEEEE-CCCChhHHHHHHHHHHCCCCcEEEECCC-CHHHHHHHHHHhCCCCcCEEEE-CCEEEeCH-HHHHHHHHC
Confidence 44443 2455677777777777799988888764 1111122333322 12234555 45557776 456665544
No 98
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=52.32 E-value=11 Score=29.35 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=24.8
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
++.|.+.+|+.+++++|.+.+-|+++|
T Consensus 58 vv~P~s~eev~~~v~~a~~~~~pv~v~ 84 (322)
T 3tx1_A 58 FVMPKTIEEAQEVVAYCHQNKIPLTIL 84 (322)
T ss_dssp EEECSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHcCCcEEEE
Confidence 468999999999999999989999997
No 99
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=52.17 E-value=20 Score=28.93 Aligned_cols=38 Identities=16% Similarity=0.137 Sum_probs=21.0
Q ss_pred CCHHHHHHHHh--CCCeEEEEeC-----CcCCCChH--HHHHHHHHc
Q psy7291 116 LDIETITKSVM--KTNYLISVEG-----GWPQCGIG--SEISARIME 153 (158)
Q Consensus 116 ld~~~l~~~~~--~~~~vvvvEe-----~~~~GG~g--~~i~~~l~~ 153 (158)
+|.+.+.+.++ ...+++++|. ++..|.+. .+|++...+
T Consensus 162 ~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~ 208 (427)
T 3i16_A 162 PNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKN 208 (427)
T ss_dssp CCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHH
Confidence 56666777666 3346777776 33444443 345555544
No 100
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=52.16 E-value=48 Score=23.58 Aligned_cols=64 Identities=11% Similarity=0.157 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHhCCCcEE-EEEeccccCCCH-----------HHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 87 AVETALDAAKILAGQGIDAE-VINLRSLRPLDI-----------ETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 87 ~~~~a~ea~~~L~~~gi~~~-vi~~~~l~Pld~-----------~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
....+.+++.+.-.+|..++ ++++.-+-.++. +.+.+.+..++.||++=--+ .+++...+..++
T Consensus 21 ~t~~la~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi~tP~Y-~~s~p~~LK~~i 96 (199)
T 4hs4_A 21 FNAAVARALPEIAPEGIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTPEY-NYSVPGVLKNAI 96 (199)
T ss_dssp HHHHHHHHHHHHCCTTEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEEEECCB-TTBCCHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcCcc-CCCcCHHHHHHH
Confidence 34444443333323577888 888876522222 24566677788888887777 678776665554
No 101
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=51.79 E-value=46 Score=25.86 Aligned_cols=56 Identities=16% Similarity=0.288 Sum_probs=38.3
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCC---C----HHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPL---D----IETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pl---d----~~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|+.-|.++.+++... ++. + ...+.++++..+.|++
T Consensus 138 l~g~tvGIIGlG~IG~~v---A~~l~~~G~~V~~~dr~~-~~~~~~~~~~~~~~l~ell~~aDvV~l 200 (324)
T 3hg7_A 138 LKGRTLLILGTGSIGQHI---AHTGKHFGMKVLGVSRSG-RERAGFDQVYQLPALNKMLAQADVIVS 200 (324)
T ss_dssp STTCEEEEECCSHHHHHH---HHHHHHTTCEEEEECSSC-CCCTTCSEEECGGGHHHHHHTCSEEEE
T ss_pred cccceEEEEEECHHHHHH---HHHHHhCCCEEEEEcCCh-HHhhhhhcccccCCHHHHHhhCCEEEE
Confidence 457899999999998765 445666688888887543 222 1 2357788887765554
No 102
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=51.65 E-value=26 Score=23.08 Aligned_cols=28 Identities=25% Similarity=0.230 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHHHhCCCcEEEEEeccc
Q psy7291 86 KAVETALDAAKILAGQGIDAEVINLRSL 113 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~~gi~~~vi~~~~l 113 (158)
++-..|...++.|.+.|+.+.++++...
T Consensus 13 nt~~~a~~i~~~l~~~g~~v~~~~~~~~ 40 (147)
T 1f4p_A 13 NTEYTAETIARELADAGYEVDSRDAASV 40 (147)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEGGGC
T ss_pred HHHHHHHHHHHHHHhcCCeeEEEehhhC
Confidence 3334444445566666888888877654
No 103
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=51.47 E-value=6.8 Score=26.75 Aligned_cols=36 Identities=22% Similarity=0.227 Sum_probs=26.0
Q ss_pred CCcEEEEEechhHHHH-HHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETA-LDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a-~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|++||++|...... -+..+.|++.||.+.+.+-.
T Consensus 67 ~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~M~T~ 103 (135)
T 2fvt_A 67 AIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTG 103 (135)
T ss_dssp SCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEEeCHH
Confidence 4799999999754322 34456788889988887543
No 104
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=50.59 E-value=22 Score=26.18 Aligned_cols=59 Identities=10% Similarity=0.091 Sum_probs=36.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHh---CCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCC
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAG---QGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQC 141 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~---~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~G 141 (158)
...-++|-|||+++.+.+.++.|.+ .|+++.++++.-..+ +. +...+.+|++=-.+-.|
T Consensus 39 ~~~kv~IlYgS~tGnte~~A~~La~~l~~g~~v~v~~l~~~~~---~~----l~~~~~vI~~tsTyG~G 100 (219)
T 3hr4_A 39 SRVRVTILFATETGKSEALAWDLGALFSCAFNPKVVCMDKYRL---SC----LEEERLLLVVTSTFGNG 100 (219)
T ss_dssp TSCEEEEEEECSSSHHHHHHHHHHHHHTTTSEEEEEEGGGCCG---GG----GGTCSEEEEEEECBTTT
T ss_pred cCCcEEEEEECCchHHHHHHHHHHHHHHcCCCeEEEEcccCCH---hH----hccCCeEEEEEeccCCC
Confidence 3456778899999888887776643 477788887665322 11 23445565554444333
No 105
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.26 E-value=18 Score=24.97 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=24.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhC-CCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQ-GIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~-gi~~~vi~~ 110 (158)
+..++|+++|.+...+ ++.|.+. |.++.+++.
T Consensus 39 ~~~v~IiG~G~~G~~~---a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGA---YDELRARYGKISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHH---HHHHHHHHCSCEEEEES
T ss_pred CCcEEEECCCHHHHHH---HHHHHhccCCeEEEEEC
Confidence 5689999999887765 4566676 888888864
No 106
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=50.14 E-value=92 Score=24.53 Aligned_cols=55 Identities=13% Similarity=0.285 Sum_probs=38.5
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc--------------c-cCCCHHHHHHHHhCCCeEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS--------------L-RPLDIETITKSVMKTNYLISVE 135 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~--------------l-~Pld~~~l~~~~~~~~~vvvvE 135 (158)
+..++|++-|.....+.++++++ |+++-+++ .- . ...|.+.+.++++..+ ++++|
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l---G~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d-~i~~e 93 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL---NIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCD-VVTAE 93 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH---TCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCS-EEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCC-EEEEC
Confidence 67899999997776666666655 88888887 21 1 2235577888888764 66765
No 107
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=50.11 E-value=40 Score=26.92 Aligned_cols=56 Identities=18% Similarity=0.112 Sum_probs=37.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec-------------cccCCCHHHHHHHHhCCCeEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR-------------SLRPLDIETITKSVMKTNYLISVE 135 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~-------------~l~Pld~~~l~~~~~~~~~vvvvE 135 (158)
++.++|++-|.......++++ +.|+++-+++.. .....|.+.+.+++.+.+ +++.|
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~---~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D-~V~~~ 103 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQ---SMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCE-AVSTE 103 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHH---HTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCS-EEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH---HCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCC-EEEEc
Confidence 778999998877666555544 458988888742 112346678888887665 45555
No 108
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=49.03 E-value=48 Score=25.86 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=39.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccc-------------cCCCHHHHHHHHhCCCeEEEEeC
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSL-------------RPLDIETITKSVMKTNYLISVEG 136 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l-------------~Pld~~~l~~~~~~~~~vvvvEe 136 (158)
+..++|++.|.....+.++++ +.|+++-+++..-- ...|.+.+.++++..+ +++.|-
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~---~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~d-vi~~~~ 81 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQ---KMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCD-VITYEF 81 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCS-EEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHH---HCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCC-cceecc
Confidence 678999999987666555544 45898888875321 2245677888887765 567763
No 109
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=48.82 E-value=41 Score=26.11 Aligned_cols=57 Identities=16% Similarity=0.369 Sum_probs=37.1
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC---CC----HHHHHHHHhCCCeEEE
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP---LD----IETITKSVMKTNYLIS 133 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P---ld----~~~l~~~~~~~~~vvv 133 (158)
...|..+.||++|.+...+ ++.|+.-|.++.+++... .+ ++ ...+.++++..+.|++
T Consensus 134 ~l~gktvGIiGlG~IG~~v---A~~l~~~G~~V~~~dr~~-~~~~~~~~~~~~~~l~ell~~aDvV~l 197 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSL---AAKASALGMHVIGVNTTG-HPADHFHETVAFTATADALATANFIVN 197 (324)
T ss_dssp CSTTCEEEEECCSHHHHHH---HHHHHHTTCEEEEEESSC-CCCTTCSEEEEGGGCHHHHHHCSEEEE
T ss_pred cccCCeEEEECcCHHHHHH---HHHHHhCCCEEEEECCCc-chhHhHhhccccCCHHHHHhhCCEEEE
Confidence 3457899999999998765 445666688888887532 22 21 1245677776665444
No 110
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=48.71 E-value=63 Score=22.21 Aligned_cols=64 Identities=8% Similarity=0.016 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhCC--CcEEEEEeccc--cCCCH------------------------HHHHHHHhCCCeEEEEeCCcC
Q psy7291 88 VETALDAAKILAGQG--IDAEVINLRSL--RPLDI------------------------ETITKSVMKTNYLISVEGGWP 139 (158)
Q Consensus 88 ~~~a~ea~~~L~~~g--i~~~vi~~~~l--~Pld~------------------------~~l~~~~~~~~~vvvvEe~~~ 139 (158)
...+...++.+++.| ..+.++++.-. .+++. +.+.+.+..++.||+.=--+
T Consensus 19 ~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~aD~iv~~~P~y- 97 (201)
T 1t5b_A 19 GQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIAAPMY- 97 (201)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHCSEEEEECCCB-
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEeCcc-
Confidence 334445566777655 78999998753 22321 22345566778888877666
Q ss_pred CCChHHHHHHHHH
Q psy7291 140 QCGIGSEISARIM 152 (158)
Q Consensus 140 ~GG~g~~i~~~l~ 152 (158)
.+++...+..++-
T Consensus 98 ~~~~p~~lK~~iD 110 (201)
T 1t5b_A 98 NFNIPTQLKNYFD 110 (201)
T ss_dssp TTBCCHHHHHHHH
T ss_pred cCcCCHHHHHHHH
Confidence 6788777766654
No 111
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=48.69 E-value=40 Score=26.29 Aligned_cols=58 Identities=17% Similarity=0.351 Sum_probs=37.7
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec----------------cccC---CCHHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR----------------SLRP---LDIETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~----------------~l~P---ld~~~l~~~~~~~~~vvv 133 (158)
..|+.++||+.|.++... ++..|...|..+++.+.. ...+ .+.+.+.+.++..+-|++
T Consensus 175 l~gk~vvVIG~G~iVG~~--~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRP--LAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTTCEEEEECCCTTTHHH--HHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCcchHHH--HHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 458899999999875544 355666778777777432 1111 334667888887765554
No 112
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=48.66 E-value=42 Score=21.16 Aligned_cols=76 Identities=16% Similarity=0.128 Sum_probs=44.9
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCc---EEEEEeccccCCC---HHHHHHHHh-CCCeEEEEeCCcCCCChHH----
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGID---AEVINLRSLRPLD---IETITKSVM-KTNYLISVEGGWPQCGIGS---- 145 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~---~~vi~~~~l~Pld---~~~l~~~~~-~~~~vvvvEe~~~~GG~g~---- 145 (158)
..+++++ -+.+..+..+...|.+.++. +..+++.. .|=. .+.+.+... ..-..+++ ++...||+..
T Consensus 19 ~~vv~f~-~~~Cp~C~~~~~~L~~~~~~~~~~~~vdi~~-~~~~~~~~~~l~~~~g~~~vP~v~i-~g~~igg~~~~~~~ 95 (114)
T 2hze_A 19 NKVTIFV-KYTCPFCRNALDILNKFSFKRGAYEIVDIKE-FKPENELRDYFEQITGGKTVPRIFF-GKTSIGGYSDLLEI 95 (114)
T ss_dssp TCEEEEE-CTTCHHHHHHHHHHTTSCBCTTSEEEEEGGG-SSSHHHHHHHHHHHHSCCSSCEEEE-TTEEEESHHHHHHH
T ss_pred CCEEEEE-eCCChhHHHHHHHHHHcCCCcCceEEEEccC-CCChHHHHHHHHHHhCCCCcCEEEE-CCEEEeCcHHHHHH
Confidence 4455554 46778888888899888988 88888765 2210 123443332 12234555 5666788743
Q ss_pred ----HHHHHHHcCC
Q psy7291 146 ----EISARIMEIP 155 (158)
Q Consensus 146 ----~i~~~l~~~~ 155 (158)
.+.+.|.+.|
T Consensus 96 ~~~~~L~~~L~~~g 109 (114)
T 2hze_A 96 DNMDALGDILSSIG 109 (114)
T ss_dssp HHTTCHHHHHHHTT
T ss_pred HHCChHHHHHHHcC
Confidence 3455555554
No 113
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=48.31 E-value=15 Score=23.84 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=19.0
Q ss_pred CCcEEEEE-ech--hHHHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVG-HSK--AVETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~-~G~--~~~~a~ea~~~L~~~gi~~~vi 108 (158)
|.++++++ .|- ++....+.++.+.+.|+.+.+|
T Consensus 79 G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~vi 114 (117)
T 3hh1_A 79 GSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPV 114 (117)
T ss_dssp TCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEe
Confidence 66777777 553 3344444555555566666654
No 114
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=48.11 E-value=20 Score=24.89 Aligned_cols=74 Identities=14% Similarity=0.090 Sum_probs=45.6
Q ss_pred EEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCH----------HHHH---------------HHHhCCCeEEEE
Q psy7291 80 TIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDI----------ETIT---------------KSVMKTNYLISV 134 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~----------~~l~---------------~~~~~~~~vvvv 134 (158)
++|.|.|......++++.+.+ .+..+++.+....|++. .... .-+..++.|++.
T Consensus 16 ilIvY~S~tGnT~~vA~~Ia~-~l~~d~~~I~~~~~y~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~yD~iilg 94 (171)
T 4ici_A 16 ILVAYFSATGTTARAAEKLGA-AVGGDLYPIAPAQPYTSADLDWNNKRSRSSVEMNDPKMRPAIKSKKENIGTYDVVFIG 94 (171)
T ss_dssp EEEEECCSSSHHHHHHHHHHH-HHTCEEEECCBSSCCCTGGGCTTCTTSHHHHHHHCTTCCCCBSCCCTTGGGCSEEEEE
T ss_pred EEEEEECCCChHHHHHHHHHH-HhCCCeEEEeeCCCCCccccchhhHhHHHHHHHhcccCCcccccccccHhHCCEEEEe
Confidence 344477766666666666654 24567888877776552 1111 124567777776
Q ss_pred eCCcCCCChHHHHHHHHHcCC
Q psy7291 135 EGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 135 Ee~~~~GG~g~~i~~~l~~~~ 155 (158)
=-.+ .|++...+..+|.+..
T Consensus 95 ~Pvy-~g~~~~~~~~fl~~~~ 114 (171)
T 4ici_A 95 YPIW-WDLAPRIINTFIEGHS 114 (171)
T ss_dssp EECB-TTBCCHHHHHHHHHSC
T ss_pred cccc-cCCchHHHHHHHHHcC
Confidence 6555 5777778888877653
No 115
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=47.98 E-value=1e+02 Score=24.39 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=42.3
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHH-----HHHHHHhCC-CeEEEEeCCcC
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIE-----TITKSVMKT-NYLISVEGGWP 139 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~-----~l~~~~~~~-~~vvvvEe~~~ 139 (158)
++=+|+++|. +..+..+|++.+...|-++.+++..+-+|-+.+ .+..+-+.. ...|-.-+|..
T Consensus 135 gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~ 204 (350)
T 3g8r_A 135 DKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHED 204 (350)
T ss_dssp CSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCC
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCC
Confidence 4567788884 668888999999888877777766555675543 343333345 44566777884
No 116
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=47.76 E-value=7.4 Score=26.24 Aligned_cols=35 Identities=9% Similarity=0.189 Sum_probs=25.5
Q ss_pred CCcEEEEEechhHHHH-HHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETA-LDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a-~ea~~~L~~~gi~~~vi~~ 110 (158)
..|++||++|...... -+..+.|++.||.+.+.+-
T Consensus 68 ~pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~m~T 103 (128)
T 2fi9_A 68 QIEVLLIGTGVELLRLPEELRVLLWEKRISSDTMST 103 (128)
T ss_dssp GCSEEEEECTTSCCCCCHHHHHHHHHTTCEEEEECH
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHcCCEEEEeCH
Confidence 4799999999864222 3445678888998888754
No 117
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=47.35 E-value=18 Score=27.60 Aligned_cols=31 Identities=29% Similarity=0.357 Sum_probs=24.1
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
-|++||+-|+.-.. ++-.|.+.|+++.|+.-
T Consensus 5 yDViIVGaGpaGl~---~A~~La~~G~~V~v~Er 35 (397)
T 3oz2_A 5 YDVLVVGGGPGGST---AARYAAKYGLKTLMIEK 35 (397)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCcEEEEeC
Confidence 48999999976544 35568888999999974
No 118
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=47.34 E-value=27 Score=27.91 Aligned_cols=56 Identities=18% Similarity=0.219 Sum_probs=31.3
Q ss_pred HHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-----CcCCCChH--HHHHHHHHc
Q psy7291 98 LAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-----GWPQCGIG--SEISARIME 153 (158)
Q Consensus 98 L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-----~~~~GG~g--~~i~~~l~~ 153 (158)
++..|+.+..+++..=.-+|.+.+.+.++...+++++|. +...|-+. .+|++...+
T Consensus 129 l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~ 191 (409)
T 3jzl_A 129 LKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKN 191 (409)
T ss_dssp TGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHh
Confidence 334455555444322122677777777765557888885 24455543 455665555
No 119
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=47.27 E-value=24 Score=24.11 Aligned_cols=49 Identities=16% Similarity=0.118 Sum_probs=33.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHHHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP-LDIETITKS 124 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~~l~~~ 124 (158)
.+++++|+-|+.....+..++.|.+.+.++.++..|.-.- +-.+.+.++
T Consensus 23 ~~~~llIaGG~GItPl~sm~~~l~~~~~~v~l~g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 23 FGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFEPMVILKEELEKA 72 (158)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHHHHHTCEEEEEEECBGGGCCSHHHHHHH
T ss_pred CCeEEEEEccCcHHHHHHHHHHHHhcCCcEEEEEeCCHHHhhHHHHHHHH
Confidence 5689999999998888888888876677788874444322 223445443
No 120
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=46.98 E-value=57 Score=24.89 Aligned_cols=56 Identities=7% Similarity=0.011 Sum_probs=30.8
Q ss_pred hCCCcEEEEEeccccCCCHHHHHHHHhC-CCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 100 GQGIDAEVINLRSLRPLDIETITKSVMK-TNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 100 ~~gi~~~vi~~~~l~Pld~~~l~~~~~~-~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
..|.++..+.+..-..+|.+.+.+.++. ..++++++. ++..|-.- +.|++...++|
T Consensus 109 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 168 (411)
T 3nnk_A 109 RCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYD 168 (411)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHT
T ss_pred HcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcC
Confidence 3466666665544445677777777763 345666665 44444322 34555555444
No 121
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=46.89 E-value=19 Score=24.69 Aligned_cols=74 Identities=14% Similarity=0.018 Sum_probs=42.9
Q ss_pred EEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHH----------HH---------------HHHhCCCeEEEE
Q psy7291 80 TIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIET----------IT---------------KSVMKTNYLISV 134 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~----------l~---------------~~~~~~~~vvvv 134 (158)
++|.|.|......++++.+.+ ++..+++.+...+|++... .. .-+..++.|++.
T Consensus 7 ilIvY~S~tG~T~~vA~~Ia~-~l~~~~~~i~~~~~y~~~~l~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~yd~iilG 85 (162)
T 3klb_A 7 ILVAYFSCSGVTKAVAEKLAA-ITGADLYEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKYEVLFVG 85 (162)
T ss_dssp EEEEECCSSSHHHHHHHHHHH-HHTCEEEECCBSSCCCTGGGCTTCTTSHHHHHHTCTTCCCCBSCCCSCGGGCSEEEEE
T ss_pred EEEEEECCCchHHHHHHHHHH-HhCCCeEEEEeCCcCCccccchhhHHHHHHHHHhccccCccccccccChhhCCEEEEE
Confidence 345566666666666666544 3456777777666665410 01 113455666666
Q ss_pred eCCcCCCChHHHHHHHHHcCC
Q psy7291 135 EGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 135 Ee~~~~GG~g~~i~~~l~~~~ 155 (158)
=-.+ .|++...+..+|.+..
T Consensus 86 ~P~~-~g~~~~~~~~fl~~~~ 105 (162)
T 3klb_A 86 FPVW-WYIAPTIINTFLESYD 105 (162)
T ss_dssp EECB-TTBCCHHHHHHHHTSC
T ss_pred cccc-cCCCCHHHHHHHHhcC
Confidence 5555 5777777877776643
No 122
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=46.45 E-value=39 Score=23.65 Aligned_cols=59 Identities=7% Similarity=-0.055 Sum_probs=38.7
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC--CCeEEEEeCCc
Q psy7291 78 DITIVGHSKAV----ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK--TNYLISVEGGW 138 (158)
Q Consensus 78 ~~~ii~~G~~~----~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~--~~~vvvvEe~~ 138 (158)
-++|+|=|... ..+.++++.|++.|+.+-.|-+. ...|.+.|..+.+. .++++.+++-.
T Consensus 118 ~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG--~~~~~~~L~~iA~~~~~~~~~~~~~~~ 182 (202)
T 1ijb_A 118 IALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIG--PHANLKQIRLIEKQAPENKAFVLSSVD 182 (202)
T ss_dssp EEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEES--TTSCHHHHHHHHHHCTTCCCEEESSGG
T ss_pred EEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecC--CcCCHHHHHHHhCCCCcccEEEeCCHH
Confidence 36667877543 24667788888887665555443 34788888888752 35778887543
No 123
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=46.29 E-value=44 Score=25.08 Aligned_cols=59 Identities=24% Similarity=0.285 Sum_probs=32.5
Q ss_pred HHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 97 ILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 97 ~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
.+...|.++..+.+..-..+|.+.+.+.++...++++++. ++..|-.- +.|.+...++|
T Consensus 107 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~ 168 (382)
T 4hvk_A 107 FLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKA 168 (382)
T ss_dssp HHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSS
T ss_pred HHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcC
Confidence 3444566666665543334567777777765446777776 33444332 45555555544
No 124
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=45.83 E-value=1.1e+02 Score=24.44 Aligned_cols=52 Identities=17% Similarity=0.247 Sum_probs=30.4
Q ss_pred hCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHcCCC
Q psy7291 100 GQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIMEIPY 156 (158)
Q Consensus 100 ~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~~ 156 (158)
..|+.+..++.. |.+.+.+.++...++|++|. +++.|..- ..|++...++|+
T Consensus 144 ~~G~~~~~v~~~-----d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~ 198 (430)
T 3ri6_A 144 SFGIEVRFVDVM-----DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGI 198 (430)
T ss_dssp HTTCEEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTC
T ss_pred HcCCEEEEeCCC-----CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCC
Confidence 345554444332 66677777765556777885 34444432 567777766654
No 125
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=45.42 E-value=29 Score=22.16 Aligned_cols=32 Identities=34% Similarity=0.414 Sum_probs=22.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
+.+++|++.|.+.... ++.|.+.|.++.+++.
T Consensus 4 ~m~i~IiG~G~iG~~~---a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTL---AKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECCSHHHHHH---HHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHH---HHHHHhCCCeEEEEEC
Confidence 3468999998877654 4456667888888864
No 126
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=45.22 E-value=62 Score=23.76 Aligned_cols=46 Identities=20% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS 124 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~ 124 (158)
+.+++||+-|.. ++|.+..|.+.|.+++++.-..-...+.......
T Consensus 152 ~~~vvViGgG~i---g~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~~~ 197 (314)
T 4a5l_A 152 NKVLMVVGGGDA---AMEEALHLTKYGSKVIILHRRDAFRASKTMQERV 197 (314)
T ss_dssp TSEEEEECSSHH---HHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHH
T ss_pred CCeEEEECCChH---HHHHHHHHHHhCCeeeeecccccccccchhhhhh
Confidence 578999988865 4566777888899999997554333444433333
No 127
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=45.00 E-value=25 Score=24.99 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=22.7
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
+++|+++|.+...+ ++.|.++|.++.+++.
T Consensus 2 ~iiIiG~G~~G~~l---a~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 2 KVIIIGGETTAYYL---ARSMLSRKYGVVIINK 31 (218)
T ss_dssp CEEEECCHHHHHHH---HHHHHHTTCCEEEEES
T ss_pred EEEEECCCHHHHHH---HHHHHhCCCeEEEEEC
Confidence 47899988776654 5567778999999873
No 128
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=44.40 E-value=42 Score=19.96 Aligned_cols=65 Identities=18% Similarity=0.158 Sum_probs=37.6
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCChHH
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~g~ 145 (158)
.+.+.+ -+.+..+.++...|++.|+++..+++.. .|-..+.+.+... ..-.++++ ++...||+..
T Consensus 7 ~v~ly~-~~~C~~C~~~~~~L~~~~i~~~~~di~~-~~~~~~~l~~~~~~~~vP~l~~-~g~~i~g~~~ 72 (92)
T 2khp_A 7 DVIIYT-RPGCPYCARAKALLARKGAEFNEIDASA-TPELRAEMQERSGRNTFPQIFI-GSVHVGGCDD 72 (92)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHHHTTCCCEEEESTT-SHHHHHHHHHHHTSSCCCEEEE-TTEEEESHHH
T ss_pred cEEEEE-CCCChhHHHHHHHHHHcCCCcEEEECCC-CHHHHHHHHHHhCCCCcCEEEE-CCEEEcCHHH
Confidence 355444 3566788888888888899999888863 1111122333332 12235555 4555777743
No 129
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=44.34 E-value=71 Score=22.28 Aligned_cols=63 Identities=10% Similarity=0.190 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCC--CcEEEEEec--cc--cCCCHH-----------------------------HHHHHHhCCCeEEE
Q psy7291 89 ETALDAAKILAGQG--IDAEVINLR--SL--RPLDIE-----------------------------TITKSVMKTNYLIS 133 (158)
Q Consensus 89 ~~a~ea~~~L~~~g--i~~~vi~~~--~l--~Pld~~-----------------------------~l~~~~~~~~~vvv 133 (158)
..+...++.+++.| ..+.++++. -. .+++.. .+.+.+..++.||+
T Consensus 21 ~la~~~~~~~~~~g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iv~ 100 (208)
T 2hpv_A 21 RALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFLSADKVVI 100 (208)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHHHHHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHhhHHHHHHHHHHHHhCCEEEE
Confidence 33445566777766 889999988 53 344322 23444556777887
Q ss_pred EeCCcCCCChHHHHHHHHH
Q psy7291 134 VEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 134 vEe~~~~GG~g~~i~~~l~ 152 (158)
.=--+ .+++...+..++-
T Consensus 101 ~~P~y-~~~~pa~lK~~iD 118 (208)
T 2hpv_A 101 ANPMW-NLNVPTRLKAWVD 118 (208)
T ss_dssp EEECB-TTBCCHHHHHHHH
T ss_pred Eeccc-cCCCCHHHHHHHH
Confidence 77666 6888777776664
No 130
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=44.10 E-value=23 Score=22.13 Aligned_cols=67 Identities=12% Similarity=0.098 Sum_probs=41.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHH-h-CCCeEEEEeCCcCCCChHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSV-M-KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~-~-~~~~vvvvEe~~~~GG~g~ 145 (158)
..+++|.+. +.+..+.+|.+.|++.|+....+++..- |--.+.+.+.. . ..-..+++. +...||+..
T Consensus 15 ~~~v~vy~~-~~Cp~C~~ak~~L~~~~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~ifi~-g~~igG~d~ 83 (99)
T 3qmx_A 15 SAKIEIYTW-STCPFCMRALALLKRKGVEFQEYCIDGD-NEAREAMAARANGKRSLPQIFID-DQHIGGCDD 83 (99)
T ss_dssp CCCEEEEEC-TTCHHHHHHHHHHHHHTCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEEEET-TEEEESHHH
T ss_pred CCCEEEEEc-CCChhHHHHHHHHHHCCCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEEEEC-CEEEeChHH
Confidence 456666654 6678888898899988999999988752 21112233332 1 122455565 445788754
No 131
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=44.04 E-value=17 Score=28.62 Aligned_cols=27 Identities=19% Similarity=0.307 Sum_probs=24.2
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
++.|.+.+|+.++++++.+++.|+.++
T Consensus 18 ~v~p~s~eel~~~l~~a~~~~~pv~vl 44 (340)
T 1uxy_A 18 IVCAEDEQQLLNAWQYATAEGQPVLIL 44 (340)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHcCCCEEEE
Confidence 467999999999999999888899886
No 132
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=43.79 E-value=49 Score=24.08 Aligned_cols=64 Identities=16% Similarity=0.097 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEecccc--CC-------------------------------CHH--HHHHHHhCCCeEE
Q psy7291 88 VETALDAAKILAGQGIDAEVINLRSLR--PL-------------------------------DIE--TITKSVMKTNYLI 132 (158)
Q Consensus 88 ~~~a~ea~~~L~~~gi~~~vi~~~~l~--Pl-------------------------------d~~--~l~~~~~~~~~vv 132 (158)
...+..+++.|++.|..+.++|+.-.. |. +.+ .+.+.+..++.||
T Consensus 18 ~~l~~~~~~~l~~~g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dd~~~~~~~l~~aD~iv 97 (228)
T 3tem_A 18 GSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVI 97 (228)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCCCcHHHHHHHHHHHhCCEEE
Confidence 344555667787779999999996542 31 121 2344466778787
Q ss_pred EEeCCcCCCChHHHHHHHHH
Q psy7291 133 SVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 133 vvEe~~~~GG~g~~i~~~l~ 152 (158)
+.=--+ .+++...+..++-
T Consensus 98 ~~~P~y-~~~~p~~lK~~iD 116 (228)
T 3tem_A 98 FQFPLY-WFSVPAILKGWMD 116 (228)
T ss_dssp EEEECB-TTBCCHHHHHHHH
T ss_pred EECChh-hcccCHHHHHHHH
Confidence 776665 6787777766653
No 133
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=43.18 E-value=17 Score=26.41 Aligned_cols=41 Identities=12% Similarity=0.052 Sum_probs=33.1
Q ss_pred CCcEEEEEechhHHH--HHHHHHHHHhCCCcEEEE----EeccccCC
Q psy7291 76 GKDITIVGHSKAVET--ALDAAKILAGQGIDAEVI----NLRSLRPL 116 (158)
Q Consensus 76 g~~~~ii~~G~~~~~--a~ea~~~L~~~gi~~~vi----~~~~l~Pl 116 (158)
++++++--+|+.... +.+.++.|.+.|.++.++ -..++.|+
T Consensus 7 ~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~ 53 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTKF 53 (201)
T ss_dssp TCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTCCT
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHHHh
Confidence 678888888886655 888999999999999988 34667777
No 134
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.01 E-value=51 Score=20.91 Aligned_cols=62 Identities=13% Similarity=0.026 Sum_probs=38.6
Q ss_pred cEEEEEechhHHHHH------HHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC------------CCeEEEEeCCcC
Q psy7291 78 DITIVGHSKAVETAL------DAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK------------TNYLISVEGGWP 139 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~------ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~------------~~~vvvvEe~~~ 139 (158)
.++|.+. +.+..+. +|.+.|++.|+....+|+.. |.+...++... +-..|++.+..
T Consensus 9 ~V~vy~~-~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~----~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~~- 82 (111)
T 2ct6_A 9 VIRVFIA-SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM----SEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRY- 82 (111)
T ss_dssp CEEEEEC-SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT----CHHHHHHHHHSCCTTTCCSSSSCCSCEEEETTEE-
T ss_pred EEEEEEc-CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC----CHHHHHHHHHHhcccccccCCCCCCCEEEECCEE-
Confidence 4666554 4445555 68888889999999999876 33332223322 12467777654
Q ss_pred CCChHH
Q psy7291 140 QCGIGS 145 (158)
Q Consensus 140 ~GG~g~ 145 (158)
.||+-.
T Consensus 83 iGG~d~ 88 (111)
T 2ct6_A 83 CGDYDS 88 (111)
T ss_dssp EEEHHH
T ss_pred EeCHHH
Confidence 688753
No 135
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=42.72 E-value=18 Score=30.94 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=25.0
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
|+.|.+.+|+.+++++|.+++-|++.|
T Consensus 209 VV~P~s~eeV~~iv~~A~~~~ipVvpr 235 (658)
T 4bby_A 209 VLWPTCHDDVVKIVNLACKYNLCIIPI 235 (658)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEeeCCHHHHHHHHHHHHHCCCeEEEE
Confidence 578999999999999999998899887
No 136
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=42.69 E-value=48 Score=25.41 Aligned_cols=57 Identities=11% Similarity=0.174 Sum_probs=36.5
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC--CCHHHHHHHHhCCCeEEE
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP--LDIETITKSVMKTNYLIS 133 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P--ld~~~l~~~~~~~~~vvv 133 (158)
...|..+.||++|.+...+- +.|+..|.++.+++... .+ .+...+.++++..+-|++
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A---~~l~~~G~~V~~~d~~~-~~~~~~~~~l~ell~~aDvV~l 199 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVA---KRALAFGMRVVYHARTP-KPLPYPFLSLEELLKEADVVSL 199 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHH---HHHHHTTCEEEEECSSC-CSSSSCBCCHHHHHHHCSEEEE
T ss_pred CCCCCEEEEEEECHHHHHHH---HHHHHCCCEEEEECCCC-cccccccCCHHHHHhhCCEEEE
Confidence 34578899999999987753 44556688887776432 21 122345667776665544
No 137
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=42.65 E-value=69 Score=20.93 Aligned_cols=64 Identities=9% Similarity=-0.027 Sum_probs=38.9
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
-.+.|++.|.......+.++.+ ++ +..+ ..++.+.+.++++..+ +++.= +..-|+|..+.++++
T Consensus 33 ~~l~i~G~g~~~~~~~~~~~~~---~~-----~v~~-g~~~~~~~~~~~~~ad-v~v~p--s~~e~~~~~~~Eama 96 (166)
T 3qhp_A 33 IVLLLKGKGPDEKKIKLLAQKL---GV-----KAEF-GFVNSNELLEILKTCT-LYVHA--ANVESEAIACLEAIS 96 (166)
T ss_dssp EEEEEECCSTTHHHHHHHHHHH---TC-----EEEC-CCCCHHHHHHHHTTCS-EEEEC--CCSCCCCHHHHHHHH
T ss_pred eEEEEEeCCccHHHHHHHHHHc---CC-----eEEE-eecCHHHHHHHHHhCC-EEEEC--CcccCccHHHHHHHh
Confidence 3567777776655554444433 44 3334 5667778888888776 44442 224577777777775
No 138
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=42.61 E-value=69 Score=23.46 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=25.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
|..++||+.|.+... .++.|.+.|.++.|++..
T Consensus 31 gk~VLVVGgG~va~~---ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATR---RIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHH---HHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHH---HHHHHHHCCCEEEEECCC
Confidence 789999999976544 456677779999999764
No 139
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=42.45 E-value=19 Score=29.45 Aligned_cols=29 Identities=7% Similarity=0.002 Sum_probs=26.0
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEec
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLEN 29 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~ 29 (158)
|+.|.+.+|+.++++.|.+++-|+.+|-.
T Consensus 40 vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 40 IAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred EEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 56899999999999999999999999843
No 140
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=42.33 E-value=36 Score=27.36 Aligned_cols=21 Identities=24% Similarity=0.439 Sum_probs=11.8
Q ss_pred CCHHHHHHHHh--CCCeEEEEeC
Q psy7291 116 LDIETITKSVM--KTNYLISVEG 136 (158)
Q Consensus 116 ld~~~l~~~~~--~~~~vvvvEe 136 (158)
+|.+.+.+.++ ...++|++|.
T Consensus 162 ~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 162 VDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCHHHHHHHhhCCCCCEEEEEEC
Confidence 55566666555 3335666665
No 141
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=41.95 E-value=77 Score=21.32 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=38.2
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCC--HHHHHHHHhC------CCeEEEEeC
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLD--IETITKSVMK------TNYLISVEG 136 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld--~~~l~~~~~~------~~~vvvvEe 136 (158)
-.++|++.|. .+....++++.+-.+ -.+..+++..=...+ .+.+.+.++. .+-++.++-
T Consensus 5 igiiIvtHG~s~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm 72 (139)
T 3gdw_A 5 VGVFVLMHGDSTASSMLKTAQELLGT-SIGTAMNMPLTMEVQTMYEQLRNQVITQKESLNNGILLLTDM 72 (139)
T ss_dssp CEEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSTGGGTTCEEEEECS
T ss_pred eeEEEEcCCHHHHHHHHHHHHHHcCc-ccEEEEEccCCCCHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 3589999999 888899999987654 566677665433222 1345565643 235666665
No 142
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=41.90 E-value=7.6 Score=26.37 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=25.4
Q ss_pred CCcEEEEEechhHHH-HHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVET-ALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~-a~ea~~~L~~~gi~~~vi~~ 110 (158)
+.|++||++|..... --+..+.|++.||.+.+.+-
T Consensus 64 ~pevliiGTG~~~~~l~p~~~~~l~~~GI~vE~m~T 99 (132)
T 2gm2_A 64 NPAVILLGTGERQQFPSTDVLAACLTRGIGLEAMTN 99 (132)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHHHTCEEEEECH
T ss_pred CCCEEEECCCCCCCcCCHHHHHHHHHcCCEEEEeCH
Confidence 589999999985532 23345677888998888754
No 143
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=41.64 E-value=42 Score=25.30 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=26.0
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|..+.||+.|.+...+ ++.|...|.++.+++..
T Consensus 155 l~g~~v~IiG~G~iG~~~---a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTI---ARTFAALGANVKVGARS 189 (300)
T ss_dssp STTSEEEEECCSHHHHHH---HHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEcccHHHHHH---HHHHHHCCCEEEEEECC
Confidence 347889999999987765 44555668888888754
No 144
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=41.59 E-value=12 Score=26.16 Aligned_cols=35 Identities=14% Similarity=0.356 Sum_probs=25.9
Q ss_pred CCcEEEEEechhHHH-HHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVET-ALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~-a~ea~~~L~~~gi~~~vi~~ 110 (158)
+.+++||++|..... --+..+.|++.||.+.+.+-
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T 123 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDT 123 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCH
Confidence 479999999985533 23456778888998888753
No 145
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=41.59 E-value=37 Score=21.70 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=23.1
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
+..++|++.|.+...+ ++.|.+.|.++.+++.
T Consensus 6 ~~~v~I~G~G~iG~~~---a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSI---VKELHRMGHEVLAVDI 37 (144)
T ss_dssp CCSEEEECCSHHHHHH---HHHHHHTTCCCEEEES
T ss_pred CCcEEEECCCHHHHHH---HHHHHHCCCEEEEEeC
Confidence 5679999988776654 4556667888877764
No 146
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=41.14 E-value=34 Score=27.49 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=26.1
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+..++|+++|.....+ ++.|.++|+++.+|+..
T Consensus 4 ~~~viIiG~Gr~G~~v---a~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQIT---GRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHH---HHHHHHTTCCEEEEECC
T ss_pred CCeEEEECCCHHHHHH---HHHHHHCCCCEEEEECC
Confidence 4579999999877764 56777889999999743
No 147
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=41.14 E-value=54 Score=25.65 Aligned_cols=57 Identities=18% Similarity=0.203 Sum_probs=37.4
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCH---HHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDI---ETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~---~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|+..|.++.+++...-..... ..+.++++..+.|++
T Consensus 169 l~gktiGIIGlG~IG~~v---A~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil 228 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRAL---ASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAV 228 (340)
T ss_dssp CTTCEEEEECCSHHHHHH---HHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEE
T ss_pred ccCCEEEEECCCHHHHHH---HHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEE
Confidence 457899999999998764 455666788887776543221111 246777877765554
No 148
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=40.67 E-value=21 Score=29.53 Aligned_cols=29 Identities=7% Similarity=0.179 Sum_probs=25.9
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEec
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLEN 29 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~ 29 (158)
|+.|.+.+|+.++++.|.+++-|+.+|-.
T Consensus 49 vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 49 IILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp EECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred EEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 57899999999999999998899999843
No 149
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=40.64 E-value=68 Score=21.90 Aligned_cols=75 Identities=13% Similarity=0.103 Sum_probs=46.7
Q ss_pred cEEEEEechhH-H--HHHHHHHHHHhCCCcEEEEEecccc--CCCHHHHHHHHhCC--CeEEEEeCCcCCCChHHHHHHH
Q psy7291 78 DITIVGHSKAV-E--TALDAAKILAGQGIDAEVINLRSLR--PLDIETITKSVMKT--NYLISVEGGWPQCGIGSEISAR 150 (158)
Q Consensus 78 ~~~ii~~G~~~-~--~a~ea~~~L~~~gi~~~vi~~~~l~--Pld~~~l~~~~~~~--~~vvvvEe~~~~GG~g~~i~~~ 150 (158)
-++|+|=|... . ...++++.+++.|+.+-.|-+..-. +.+.+.|.++.... ..++.+++......+-..|...
T Consensus 113 ~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~~~l~~~~~~i~~~ 192 (198)
T 1n3y_A 113 ILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEK 192 (198)
T ss_dssp EEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHH
T ss_pred EEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcCCCcccEEEeCCHHHHHHHHHHHHhh
Confidence 46667777533 1 2356677888889887777665532 34678888887754 3567777644444455555554
Q ss_pred HH
Q psy7291 151 IM 152 (158)
Q Consensus 151 l~ 152 (158)
+.
T Consensus 193 ic 194 (198)
T 1n3y_A 193 IF 194 (198)
T ss_dssp HH
T ss_pred ee
Confidence 43
No 150
>2gfq_A UPF0204 protein PH0006; structural genomics, PSI, Pro structure initiative, midwest center for structural genomic unknown function; 1.75A {Pyrococcus horikoshii} SCOP: c.56.7.1
Probab=40.57 E-value=1.2e+02 Score=23.39 Aligned_cols=79 Identities=13% Similarity=0.016 Sum_probs=56.1
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC---CCeEEEEeCCcCCCChHHHHHHHHHc
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK---TNYLISVEGGWPQCGIGSEISARIME 153 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~---~~~vvvvEe~~~~GG~g~~i~~~l~~ 153 (158)
....+|+.|.. +++-.-.+.+.+.++.++.|=....-|++.+.+.+.+.+ ....+++|.-...|.-=..|.+++.+
T Consensus 210 ~~~~~iG~GGg-HYapr~t~~~l~~~~~~GHi~pky~l~~~~e~l~~ai~~~~~~~~~~~iD~K~~k~~~R~~i~~~l~~ 288 (298)
T 2gfq_A 210 KFKVALGIGGG-HYAPKQTKRALEGDLAFGHILPKYAQPVSRDVMIKALNRFGEKVEAIYVDWKGSRGETRQLAKSLAQE 288 (298)
T ss_dssp TCEEEEEECSC-TTCHHHHHHHHHSSEEEEEEECGGGCCCCHHHHHHHHTCBSSCCCEEEEESTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CcChHHHHHHhhCCeeEEeeccccchhcCHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHHHHHHH
Confidence 34567887642 444444444455578899888888778999998888865 23566888755667777888888888
Q ss_pred CCC
Q psy7291 154 IPY 156 (158)
Q Consensus 154 ~~~ 156 (158)
.|+
T Consensus 289 lgi 291 (298)
T 2gfq_A 289 LGL 291 (298)
T ss_dssp HTC
T ss_pred CCC
Confidence 776
No 151
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=40.37 E-value=17 Score=29.90 Aligned_cols=27 Identities=22% Similarity=0.193 Sum_probs=24.2
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
|+.|.+.+|+.+++++|.+++-|+.+|
T Consensus 55 vv~P~s~eeV~~~v~~a~~~~~pv~~~ 81 (476)
T 3pm9_A 55 VLRPGSTEEVVAICKLANEARVALVPQ 81 (476)
T ss_dssp EECCCSHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEecCCHHHHHHHHHHHHHcCCeEEEE
Confidence 468999999999999999888888887
No 152
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=40.14 E-value=44 Score=25.27 Aligned_cols=33 Identities=9% Similarity=0.094 Sum_probs=21.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi 108 (158)
..+++.+.+||++..+.+.+.+..++|.++.+|
T Consensus 41 dg~vIgLGsGST~~~~i~~L~~~~~~gl~ItvV 73 (255)
T 3hhe_A 41 DDMRLGIGSGSTVNEFIPLLGERVANGLRVTCV 73 (255)
T ss_dssp TTEEEEECCSHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHhhccCCcEEEE
Confidence 457888888888887777665543345555544
No 153
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=39.81 E-value=67 Score=20.00 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=42.0
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHH---HHHHHHh-CCCeEEEEeCCcCCCChHH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIE---TITKSVM-KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~---~l~~~~~-~~~~vvvvEe~~~~GG~g~ 145 (158)
.++++.+. +.+..+..+.+.|++.|+....+++....|-+.+ .+.+... .+-..+++. +...||+..
T Consensus 19 ~~v~vy~~-~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi~-g~~igG~~~ 89 (113)
T 3rhb_A 19 NTVVIYSK-TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVC-GKHIGGCTD 89 (113)
T ss_dssp SSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEET-TEEEESHHH
T ss_pred CCEEEEEC-CCChhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEEC-CEEEcCcHH
Confidence 45666555 6778999999999999999999998765332222 1222211 122355554 455788753
No 154
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=39.58 E-value=95 Score=21.66 Aligned_cols=48 Identities=6% Similarity=-0.027 Sum_probs=36.9
Q ss_pred CCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 102 GIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 102 gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
..+++++++.- +.|-+...+.+..++.||+.=--+ .+++...+..++-
T Consensus 28 ~~~v~v~dL~~--~~D~~~~~~~l~~aD~iV~~~P~y-~~~~pa~lK~~iD 75 (177)
T 3ha2_A 28 FSNVTWHPLVA--DFNVEQEQSLLLQNDRIILEFPLY-WYSAPALLKQWMD 75 (177)
T ss_dssp CTTEEEEECCT--TCCHHHHHHHHHTCSEEEEEEECB-TTBCCHHHHHHHH
T ss_pred CCCEEEEECCC--cccHHHHHHHHHhCCEEEEECChh-hccCCHHHHHHHH
Confidence 35699999887 888888888888888888876665 6777777766653
No 155
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=39.52 E-value=24 Score=24.38 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=38.7
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC--CeEEEEeCC
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT--NYLISVEGG 137 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~--~~vvvvEe~ 137 (158)
++|++.|.......++++.+++.|+.+-.|-+. ...+.+.|..+.... +.++.+++-
T Consensus 112 vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG--~~~~~~~L~~iA~~~~~~~~~~~~~~ 170 (189)
T 1atz_A 112 VVILVTDVSVDSVDAAADAARSNRVTVFPIGIG--DRYDAAQLRILAGPAGDSNVVKLQRI 170 (189)
T ss_dssp EEEEECSCCSSCCHHHHHHHHHTTEEEEEEEES--SSSCHHHHHHHTGGGGGGGCEEESST
T ss_pred EEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcC--CcCCHHHHHHHHCCCcccCEEEecCh
Confidence 567888865555667788888887765555443 247888888887654 367777653
No 156
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=39.43 E-value=1.2e+02 Score=22.81 Aligned_cols=56 Identities=4% Similarity=-0.006 Sum_probs=28.3
Q ss_pred hCCCcEEEEEeccccCCCHHHHHHHHhC-CCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 100 GQGIDAEVINLRSLRPLDIETITKSVMK-TNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 100 ~~gi~~~vi~~~~l~Pld~~~l~~~~~~-~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
..|..+..+.+..-..+|.+.+.+.++. ..++++++. +++.|-.- +.|.+...++|
T Consensus 119 ~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 178 (393)
T 3kgw_A 119 RIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQ 178 (393)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTT
T ss_pred HcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcC
Confidence 3455555555443345676777666654 334555554 33333321 34555555544
No 157
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=39.05 E-value=99 Score=21.72 Aligned_cols=63 Identities=8% Similarity=0.032 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhC--CCcEEEEEeccc--cCCCHH-------------------------HHHHHHhCCCeEEEEeCCcC
Q psy7291 89 ETALDAAKILAGQ--GIDAEVINLRSL--RPLDIE-------------------------TITKSVMKTNYLISVEGGWP 139 (158)
Q Consensus 89 ~~a~ea~~~L~~~--gi~~~vi~~~~l--~Pld~~-------------------------~l~~~~~~~~~vvvvEe~~~ 139 (158)
..+..+++.+++. |..+.++++.-. .+++.. .+.+.+..++.||+.=--+
T Consensus 20 ~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~y- 98 (212)
T 3r6w_A 20 RLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMY- 98 (212)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHCSEEEEEEECB-
T ss_pred HHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEcCcc-
Confidence 3455566777776 889999998643 233321 2334455677777776666
Q ss_pred CCChHHHHHHHHH
Q psy7291 140 QCGIGSEISARIM 152 (158)
Q Consensus 140 ~GG~g~~i~~~l~ 152 (158)
.+++...+..++-
T Consensus 99 ~~~~pa~lK~~iD 111 (212)
T 3r6w_A 99 NFSVPSGLKAWID 111 (212)
T ss_dssp TTBCCHHHHHHHH
T ss_pred cccCCHHHHHHHH
Confidence 6788777766653
No 158
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=38.89 E-value=23 Score=29.29 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=25.9
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEec
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLEN 29 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~ 29 (158)
|+.|.+.+|+.++++.|.+++-|+.+|-.
T Consensus 38 vv~P~s~~dV~~~v~~a~~~~~~v~vrgg 66 (501)
T 3pop_A 38 FFLPATPDDVVASLQKAVTEGRGVACRSG 66 (501)
T ss_dssp EEECSSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred EEEeCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 46899999999999999999999999843
No 159
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=38.69 E-value=1.3e+02 Score=23.88 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=38.1
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCC
Q psy7291 78 DITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCG 142 (158)
Q Consensus 78 ~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG 142 (158)
++. |.+|. ....+++.++.|+++|+.+.+...... . +. ...-++.+.|+.+.+....||
T Consensus 338 ~v~-v~~~~~~~~~a~~~a~~LR~~G~~v~~~~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~ 397 (400)
T 3od1_A 338 QTC-ILFSNERRFEAIELARKKRANGEAVVLQDLAGV---T-DV-DAMSSNYQDVIYCIGTAGRGG 397 (400)
T ss_dssp CEE-EEECGGGHHHHHHHHHHHHTTTCCEEEEEGGGC---S-CH-HHHHTTSSEEEEECSCC----
T ss_pred eEE-EEECcHHHHHHHHHHHHHHHCCCEEEEEecCCh---h-HH-HHHHcCCCEEEEEecCCCCCC
Confidence 354 45765 467788999999999999988766542 1 22 223346788998887764444
No 160
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=38.39 E-value=75 Score=23.43 Aligned_cols=74 Identities=12% Similarity=-0.051 Sum_probs=44.9
Q ss_pred CcEEEEEechhHHHHHHHHH----HHHhCC--CcEEEEEec-----------cccCCCHHHHHHHHh-CCCeEEEEeCCc
Q psy7291 77 KDITIVGHSKAVETALDAAK----ILAGQG--IDAEVINLR-----------SLRPLDIETITKSVM-KTNYLISVEGGW 138 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~----~L~~~g--i~~~vi~~~-----------~l~Pld~~~l~~~~~-~~~~vvvvEe~~ 138 (158)
.-+++++.||....+.+.++ .+++.. ..+..=-.. +-.|...+.+.++.. ++++|+++=-+.
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l 89 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHT 89 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCS
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEecee
Confidence 35888999986655444433 344432 333221111 235888888888765 568899998887
Q ss_pred CCCChHHHHHHH
Q psy7291 139 PQCGIGSEISAR 150 (158)
Q Consensus 139 ~~GG~g~~i~~~ 150 (158)
..|..-..|.+.
T Consensus 90 ~~G~~~~di~~~ 101 (269)
T 2xvy_A 90 IPGEEFHGLLET 101 (269)
T ss_dssp SSSHHHHHHHHH
T ss_pred eccHhHHHHHHH
Confidence 666555566555
No 161
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=38.25 E-value=32 Score=27.60 Aligned_cols=36 Identities=14% Similarity=0.261 Sum_probs=19.5
Q ss_pred CCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC
Q psy7291 101 QGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG 136 (158)
Q Consensus 101 ~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe 136 (158)
.|..+..++...=..+|.+.+.+.++...++|++|.
T Consensus 138 ~G~~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~ 173 (431)
T 3ht4_A 138 YNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQR 173 (431)
T ss_dssp GTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEEC
T ss_pred cCCEEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEEC
Confidence 355544444322233566667666655456677773
No 162
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=38.16 E-value=25 Score=29.32 Aligned_cols=28 Identities=14% Similarity=0.156 Sum_probs=25.5
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|.+++-|+.+|-
T Consensus 62 vv~p~s~~dv~~~v~~a~~~~~~v~v~g 89 (530)
T 2y3s_A 62 IHLVGSAAEIEQVLSRAVRSGKRVAVRS 89 (530)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred EEecCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 4789999999999999999899999984
No 163
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=38.14 E-value=91 Score=24.05 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=23.2
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCC-cEEEEEec
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGI-DAEVINLR 111 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi-~~~vi~~~ 111 (158)
.++.++|++.|.+... ++..|.+.|. ++.|++-.
T Consensus 153 ~gk~~lVlGaGG~g~a---ia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATA---ICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHH---HHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHH---HHHHHHHCCCCEEEEEECC
Confidence 3678899988855443 4556667787 68777644
No 164
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=37.64 E-value=86 Score=23.79 Aligned_cols=62 Identities=16% Similarity=0.130 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccccC--------------------------------CC--HHHHHHHHhCCCeEEEE
Q psy7291 89 ETALDAAKILAGQGIDAEVINLRSLRP--------------------------------LD--IETITKSVMKTNYLISV 134 (158)
Q Consensus 89 ~~a~ea~~~L~~~gi~~~vi~~~~l~P--------------------------------ld--~~~l~~~~~~~~~vvvv 134 (158)
..+..+++.|++.|..|+++|+.-..+ ++ .....+.+..++.||++
T Consensus 40 aL~~~~~~~l~~~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~aD~iv~~ 119 (280)
T 4gi5_A 40 ALKNFAIRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQSADIVAEQEKLLWADTVIFQ 119 (280)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCCcHHHHHHHHHHHhCCEEEEE
Confidence 344556788889999999999864332 11 12234445667777777
Q ss_pred eCCcCCCChHHHHHHHH
Q psy7291 135 EGGWPQCGIGSEISARI 151 (158)
Q Consensus 135 Ee~~~~GG~g~~i~~~l 151 (158)
=--+ .+++-..+..++
T Consensus 120 ~P~~-w~~~Pa~lK~~i 135 (280)
T 4gi5_A 120 FPLW-WFSMPAIMKGWI 135 (280)
T ss_dssp EECB-TTBCCHHHHHHH
T ss_pred eccc-cccCcHHHHHHH
Confidence 6555 566666665554
No 165
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=37.27 E-value=18 Score=24.63 Aligned_cols=57 Identities=9% Similarity=0.089 Sum_probs=39.2
Q ss_pred CcEEEEEechhHHH----HHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC
Q psy7291 77 KDITIVGHSKAVET----ALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG 136 (158)
Q Consensus 77 ~~~~ii~~G~~~~~----a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe 136 (158)
+-++++|=|..... ..++++.+++.|+.+-.|-+. ..+.+.|.++....++++.+++
T Consensus 108 ~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg---~~~~~~L~~iA~~~~~~~~~~~ 168 (185)
T 3n2n_F 108 SVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK---DFNETQLARIADSKDHVFPVND 168 (185)
T ss_dssp EEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS---SCCHHHHTTTSSSGGGEEEHHH
T ss_pred cEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec---cCCHHHHHHHhCCCCCeEEecc
Confidence 35677777764333 257788888888766666554 6788888877766667777765
No 166
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=37.18 E-value=99 Score=23.51 Aligned_cols=78 Identities=15% Similarity=0.109 Sum_probs=46.4
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 80 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 159 (301)
T 1xky_A 80 KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTV 159 (301)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHH
T ss_pred CCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHH
Confidence 44446778886 5677777777777778887777666665556665443 33332 3566665433333 2455555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 160 ~~La~ 164 (301)
T 1xky_A 160 VRLSE 164 (301)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55544
No 167
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=37.05 E-value=93 Score=24.98 Aligned_cols=40 Identities=15% Similarity=0.039 Sum_probs=25.0
Q ss_pred CHHHHHHHHhCCC-eEEEEeCC-cCCCChH--HHHHHHHHcCCC
Q psy7291 117 DIETITKSVMKTN-YLISVEGG-WPQCGIG--SEISARIMEIPY 156 (158)
Q Consensus 117 d~~~l~~~~~~~~-~vvvvEe~-~~~GG~g--~~i~~~l~~~~~ 156 (158)
|.+.+.+.++... ++|++|.- ++.|-+- ..|++...++|.
T Consensus 188 d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~ 231 (445)
T 1qgn_A 188 DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGA 231 (445)
T ss_dssp CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCC
Confidence 6677777776555 77888763 3444332 567777766653
No 168
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=36.96 E-value=46 Score=25.49 Aligned_cols=51 Identities=16% Similarity=0.237 Sum_probs=32.1
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLI 132 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vv 132 (158)
..|++++||+.|.++... ++..|..+|..+++.+-++ +.+.+.++..+-|+
T Consensus 148 l~Gk~vvVvG~s~iVG~p--lA~lL~~~gAtVtv~~~~t------~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRP--LSMMLLNRNYTVSVCHSKT------KDIGSMTRSSKIVV 198 (276)
T ss_dssp CCSCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTC------SCHHHHHHHSSEEE
T ss_pred cCCCEEEEEcCChHHHHH--HHHHHHHCCCeEEEEeCCc------ccHHHhhccCCEEE
Confidence 348999999998766544 3445666788888776443 22445555554333
No 169
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=36.93 E-value=26 Score=28.76 Aligned_cols=28 Identities=7% Similarity=0.159 Sum_probs=25.7
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+..+++.|-+++-|+.+|-
T Consensus 56 vv~p~~~~~v~~~v~~a~~~~~~~~~r~ 83 (500)
T 3tsh_A 56 IITPTQVSHIQSAVVCGRRHSVRIRVRS 83 (500)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCEEEEES
T ss_pred EEEcCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 5789999999999999999999999984
No 170
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=36.75 E-value=80 Score=21.15 Aligned_cols=31 Identities=19% Similarity=0.152 Sum_probs=20.1
Q ss_pred EEEEechhHHHHHHHHHHHHhC-CCcEEEEEec
Q psy7291 80 TIVGHSKAVETALDAAKILAGQ-GIDAEVINLR 111 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~~~L~~~-gi~~~vi~~~ 111 (158)
++|.|+|......+.++.+.+. |. +.++++.
T Consensus 4 ~~I~Y~S~tGnT~~~A~~ia~~lg~-~~~~~~~ 35 (164)
T 2bmv_A 4 IGIFFGTDSGNAEAIAEKISKAIGN-AEVVDVA 35 (164)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHCS-EEEEEGG
T ss_pred EEEEEECCCchHHHHHHHHHHHcCC-cEEEecc
Confidence 3566888888877777766543 44 5555543
No 171
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=36.31 E-value=1.2e+02 Score=23.22 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=49.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCCChHHHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQCGIGSEISAR 150 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~GG~g~~i~~~ 150 (158)
|+--+|+++|+.+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+... ..|-+..+....
T Consensus 80 grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn---~tg~l~~~~~~~ 156 (314)
T 3d0c_A 80 GRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF---KDAHLSDDVIKE 156 (314)
T ss_dssp TSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE---CCTTSCTHHHHH
T ss_pred CCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe---CCCCcCHHHHHH
Confidence 445677888886677888788888889988777777766667665543 33332 4677777 333366555555
Q ss_pred HHc
Q psy7291 151 IME 153 (158)
Q Consensus 151 l~~ 153 (158)
|++
T Consensus 157 La~ 159 (314)
T 3d0c_A 157 LAP 159 (314)
T ss_dssp HTT
T ss_pred HHc
Confidence 554
No 172
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=36.17 E-value=41 Score=24.95 Aligned_cols=32 Identities=28% Similarity=0.275 Sum_probs=23.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
.-|++||+-|+.--. |+..|.+.|.++.|++-
T Consensus 6 ~yDvvIIG~GpAGl~---aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMT---AAVYASRANLKTVMIER 37 (312)
T ss_dssp SEEEEEECCSHHHHH---HHHHHHHTTCCEEEEES
T ss_pred CCCEEEECCCHHHHH---HHHHHHHCCCCEEEEec
Confidence 358999999975432 44566677999999974
No 173
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=36.03 E-value=49 Score=22.29 Aligned_cols=31 Identities=32% Similarity=0.432 Sum_probs=23.4
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+++||+-|... ++++..|.+.|.++.+++..
T Consensus 3 ~vvIIGgG~~G---l~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGPSG---LSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCHHH---HHHHHHHHHCCCcEEEEeCC
Confidence 68899888653 34566677789999999854
No 174
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=35.95 E-value=54 Score=26.26 Aligned_cols=58 Identities=12% Similarity=0.208 Sum_probs=36.8
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC---H-HHHHHHHhCCCeEEE
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD---I-ETITKSVMKTNYLIS 133 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld---~-~~l~~~~~~~~~vvv 133 (158)
...|..+.||++|.+...+ ++.|+.-|.++.++|...-.... . ..+.++++..+.|++
T Consensus 142 el~gktlGiIGlG~IG~~v---A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l 203 (404)
T 1sc6_A 142 EARGKKLGIIGYGHIGTQL---GILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSL 203 (404)
T ss_dssp CSTTCEEEEECCSHHHHHH---HHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEE
T ss_pred ccCCCEEEEEeECHHHHHH---HHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEE
Confidence 3458899999999998875 34555668888888764322221 1 135667766654433
No 175
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=35.84 E-value=27 Score=29.46 Aligned_cols=27 Identities=22% Similarity=0.214 Sum_probs=24.4
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
|+.|.+.+|+.++++.|.+++-|+.+|
T Consensus 49 Vv~P~s~~eV~~iv~~a~~~~~~v~~~ 75 (571)
T 1f0x_A 49 VVFPGSLLELWRVLKACVTADKIILMQ 75 (571)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEeeCCHHHHHHHHHHHHHcCCCEEEE
Confidence 468999999999999999888888887
No 176
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=35.82 E-value=21 Score=29.87 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=24.4
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|.+++-|+.+|-
T Consensus 74 Vv~P~s~~eV~~iv~~a~~~~~pv~~~g 101 (560)
T 1e8g_A 74 IVAPRNVADVQSIVGLANKFSFPLWPIS 101 (560)
T ss_dssp EECCSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEeCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 5689999999999999998788888873
No 177
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=35.68 E-value=35 Score=28.32 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=22.7
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEV 107 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~v 107 (158)
.+|+.++||+||+..+. . +..|++.|++|.|
T Consensus 35 lkgK~IaVIGyGsQG~A--q-AlNLRDSGv~V~V 65 (491)
T 3ulk_A 35 LQGKKVVIVGCGAQGLN--Q-GLNMRDSGLDISY 65 (491)
T ss_dssp GTTSEEEEESCSHHHHH--H-HHHHHHTTCEEEE
T ss_pred HcCCEEEEeCCChHhHH--H-HhHHHhcCCcEEE
Confidence 34789999999998643 1 2358888988754
No 178
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=35.67 E-value=89 Score=23.96 Aligned_cols=58 Identities=10% Similarity=0.123 Sum_probs=30.8
Q ss_pred HHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 98 LAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 98 L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
+...|.++..+....-..+|.+.+.+.+....++++++. ++..|-.- ..|.+...++|
T Consensus 133 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 193 (423)
T 3lvm_A 133 LEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARG 193 (423)
T ss_dssp HHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHT
T ss_pred HHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcC
Confidence 344465555554433334566777777765456666765 33444332 44555555444
No 179
>3le1_A Phosphotransferase system, HPR-related proteins; HPR PTS phosphotransfer, kinase; 1.51A {Thermoanaerobacter tengcongensis} SCOP: d.94.1.0 PDB: 3le3_A 3lnw_A 3lfg_A 3le5_A
Probab=35.66 E-value=64 Score=19.91 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=23.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCC
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGI 103 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi 103 (158)
|..+.|.+.|.....|++++..|-+.+.
T Consensus 58 G~~i~i~a~G~De~~A~~~l~~l~~~~f 85 (88)
T 3le1_A 58 GNVVKLSAEGDDEEEAIKALVDLIESKF 85 (88)
T ss_dssp TCEEEEEEESTTHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHhcc
Confidence 7889999999999999999888766543
No 180
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=35.64 E-value=95 Score=20.54 Aligned_cols=59 Identities=12% Similarity=0.220 Sum_probs=38.1
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCH--HHHHHHHhCC----CeEEEEeC
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDI--ETITKSVMKT----NYLISVEG 136 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~--~~l~~~~~~~----~~vvvvEe 136 (158)
-.++|++.|. .+....++++.+-.+ -.+..+++..=...+. +.+.+.+++. .-++.++-
T Consensus 5 igiiivsHG~~~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~d~~~GVLiL~Dm 70 (130)
T 3gx1_A 5 VEVIVMMHGRSTATSMVETVQELLSI-ESGIALDMPLTVEVKAMYEKLKQTVVKLNPVKGVLILSDM 70 (130)
T ss_dssp CEEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSCCTTCEEEEECS
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHcCc-cCEEEEEecCCCCHHHHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 3589999999 889999999987654 5677777654222211 3355555542 34666665
No 181
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=35.60 E-value=94 Score=23.83 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=46.1
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH----HhCC-CeEEEEeCCcCCCChHHHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS----VMKT-NYLISVEGGWPQCGIGSEISAR 150 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~----~~~~-~~vvvvEe~~~~GG~g~~i~~~ 150 (158)
|+--+|+++|+.+..+.+-++..++.|.+.-++-.++..+.+.+.+.+. ++.. -.|+...- .-.+..+....
T Consensus 80 grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~---g~~l~~~~~~~ 156 (316)
T 3e96_A 80 GRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK---DPEISDRVLVD 156 (316)
T ss_dssp TSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC---CTTSCTHHHHH
T ss_pred CCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC---CCCCCHHHHHH
Confidence 4556778888878888887777777788877776666555566554333 3222 35776653 11344455555
Q ss_pred HHc
Q psy7291 151 IME 153 (158)
Q Consensus 151 l~~ 153 (158)
|++
T Consensus 157 La~ 159 (316)
T 3e96_A 157 LAP 159 (316)
T ss_dssp HTT
T ss_pred HHc
Confidence 554
No 182
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=35.52 E-value=22 Score=29.39 Aligned_cols=28 Identities=18% Similarity=0.294 Sum_probs=24.4
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|.+++-|+.+|-
T Consensus 60 vv~P~s~~ev~~~v~~a~~~~~pv~~~g 87 (520)
T 1wvf_A 60 AVTATTVEQVQGVVKICNEHKIPIWTIS 87 (520)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEecCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 5789999999999999998788888863
No 183
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=35.47 E-value=66 Score=18.63 Aligned_cols=65 Identities=11% Similarity=-0.015 Sum_probs=37.2
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEecccc-CCCHHHHHHHHhC------CCeEEEEeCCcCCCChHH
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLR-PLDIETITKSVMK------TNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~-Pld~~~l~~~~~~------~~~vvvvEe~~~~GG~g~ 145 (158)
+.|.+. +.+..+.++...|.+.|++...+++.... |...+.+.+.... .-.++++ ++...||+..
T Consensus 6 v~ly~~-~~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i-~g~~i~g~~~ 77 (89)
T 3msz_A 6 VKIYTR-NGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI-DDEHIGGFTE 77 (89)
T ss_dssp EEEEEC-TTCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE-TTEEEESHHH
T ss_pred EEEEEc-CCChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE-CCEEEeChHH
Confidence 444433 56788888888899999988888654321 1111233333222 2245566 4555788754
No 184
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=35.36 E-value=71 Score=19.34 Aligned_cols=65 Identities=6% Similarity=0.002 Sum_probs=38.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCc---EEEEEeccccCCCH---HHHHHHHh-CCCeEEEEeCCcCCCChH
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGID---AEVINLRSLRPLDI---ETITKSVM-KTNYLISVEGGWPQCGIG 144 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~---~~vi~~~~l~Pld~---~~l~~~~~-~~~~vvvvEe~~~~GG~g 144 (158)
..+++++ -+.+..+..+...|.+.+++ +..+++..- |-.. +.+.+... ..-..++++ +...||+.
T Consensus 12 ~~v~~f~-~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~-~~~~~~~~~l~~~~g~~~vP~i~~~-g~~i~g~~ 83 (105)
T 1kte_A 12 GKVVVFI-KPTCPFCRKTQELLSQLPFKEGLLEFVDITAT-SDTNEIQDYLQQLTGARTVPRVFIG-KECIGGCT 83 (105)
T ss_dssp TCEEEEE-CSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGS-TTHHHHHHHHHHHHSCCCSCEEEET-TEEEESHH
T ss_pred CCEEEEE-cCCCHhHHHHHHHHHHcCCCCCccEEEEccCC-CCHHHHHHHHHHHhCCCCcCeEEEC-CEEEeccH
Confidence 4555554 46678888888889888888 888887652 2101 23433332 222345554 55578864
No 185
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=35.36 E-value=96 Score=21.70 Aligned_cols=62 Identities=18% Similarity=0.216 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecccc--CC----------------CHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHH
Q psy7291 89 ETALDAAKILAGQGIDAEVINLRSLR--PL----------------DIETITKSVMKTNYLISVEGGWPQCGIGSEISAR 150 (158)
Q Consensus 89 ~~a~ea~~~L~~~gi~~~vi~~~~l~--Pl----------------d~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~ 150 (158)
..+..+++.+ +.|..+.++++.-.. |. +.+.+.+.+..++.||+.=--+ .+++...+..+
T Consensus 18 ~l~~~~~~~~-~~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~y-~~~~pa~LK~~ 95 (196)
T 3lcm_A 18 EILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHLIFIFPIW-WSGMPAILKGF 95 (196)
T ss_dssp HHHHHHHHHS-CTTSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHH
T ss_pred HHHHHHHHHh-cCCCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHhCCEEEEECchh-hccccHHHHHH
Confidence 3344445566 668999999997653 31 2244566677788888776655 67887777666
Q ss_pred HH
Q psy7291 151 IM 152 (158)
Q Consensus 151 l~ 152 (158)
+-
T Consensus 96 iD 97 (196)
T 3lcm_A 96 ID 97 (196)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 186
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=35.23 E-value=70 Score=23.63 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=40.0
Q ss_pred cEEEEEechhH--HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC-----CeEEEEeCCc
Q psy7291 78 DITIVGHSKAV--ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT-----NYLISVEGGW 138 (158)
Q Consensus 78 ~~~ii~~G~~~--~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~-----~~vvvvEe~~ 138 (158)
-++|||=|... ..+.++++.|++.|+.+-.|-+. ...+.+.|..+.... ..++.+++-.
T Consensus 131 ~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG--~~~~~~~L~~iA~~~~~~g~~~~~~~~~~~ 196 (281)
T 4hqf_A 131 LVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIG--QGINVAFNRFLVGCHPSDGKCNLYADSAWE 196 (281)
T ss_dssp EEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEES--SSCCHHHHHHHTTSCSSSSCCTTEEEECGG
T ss_pred EEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCC--CccCHHHHHhhhCCCCCCCCCceEEecchh
Confidence 36677778643 36778888899888776666554 347888777776542 3677777643
No 187
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=35.18 E-value=46 Score=22.66 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=19.2
Q ss_pred EEEEechhHHHHHHHH----HHHHhCCCcEEEEEecc
Q psy7291 80 TIVGHSKAVETALDAA----KILAGQGIDAEVINLRS 112 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~----~~L~~~gi~~~vi~~~~ 112 (158)
++|.|+|+.....+.+ +.|.+.|+.+.++++..
T Consensus 12 i~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 48 (167)
T 1ykg_A 12 ITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGD 48 (167)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHHHTCCCEEEEGGG
T ss_pred EEEEEECCchHHHHHHHHHHHHHHHCCCceEEeehhh
Confidence 3455666665555444 44555577777776543
No 188
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=35.01 E-value=61 Score=26.22 Aligned_cols=57 Identities=12% Similarity=0.186 Sum_probs=36.9
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC----HHHHHHHHhCCCeEE
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD----IETITKSVMKTNYLI 132 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld----~~~l~~~~~~~~~vv 132 (158)
...|+.+.||++|.+...+- +.|+.-|.++..+|...-.+.. ...+.++++..+.|+
T Consensus 153 el~gktvGIIGlG~IG~~vA---~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~ 213 (416)
T 3k5p_A 153 EVRGKTLGIVGYGNIGSQVG---NLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVS 213 (416)
T ss_dssp CSTTCEEEEECCSHHHHHHH---HHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEE
T ss_pred cCCCCEEEEEeeCHHHHHHH---HHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEE
Confidence 34578999999999987753 4555668888888754322211 124667777665444
No 189
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=34.99 E-value=23 Score=29.24 Aligned_cols=29 Identities=10% Similarity=0.176 Sum_probs=25.5
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEec
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLEN 29 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~ 29 (158)
|+.|.+.+|+..+++.|.+++-|+.+|-.
T Consensus 46 vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 74 (503)
T 1zr6_A 46 IAIPRSTEDIAAAVQCGLDAGVQISAKGG 74 (503)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred EEEeCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 46899999999999999988889999843
No 190
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=34.92 E-value=1e+02 Score=23.27 Aligned_cols=78 Identities=12% Similarity=0.071 Sum_probs=48.1
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC----C-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK----T-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~----~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+..+. . -.|+...--...| .+..+..
T Consensus 69 gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~ 148 (291)
T 3a5f_A 69 KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTL 148 (291)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHH
Confidence 44447788887 56777777777788888877777777666677766554432 2 3566665433333 2455555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 149 ~~La~ 153 (291)
T 3a5f_A 149 KELCE 153 (291)
T ss_dssp HHHTT
T ss_pred HHHHc
Confidence 55554
No 191
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=34.56 E-value=1.4e+02 Score=22.20 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=34.2
Q ss_pred cEEEEEechh-HHHHHHHHHHHHhCCCc-EEEEE-eccc-cCCCHH----HHHHHHhCCC-eEEEEeCCcCC---CChHH
Q psy7291 78 DITIVGHSKA-VETALDAAKILAGQGID-AEVIN-LRSL-RPLDIE----TITKSVMKTN-YLISVEGGWPQ---CGIGS 145 (158)
Q Consensus 78 ~~~ii~~G~~-~~~a~ea~~~L~~~gi~-~~vi~-~~~l-~Pld~~----~l~~~~~~~~-~vvvvEe~~~~---GG~g~ 145 (158)
+++.++.|+. .. ++++.+-..|.+ +-+++ -+.+ ..++.. .|.+++++.+ .+|++=..... +.+|.
T Consensus 60 ~V~av~~G~~~a~---~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p 136 (255)
T 1efv_B 60 EVIAVSCGPAQCQ---ETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQ 136 (255)
T ss_dssp EEEEEEEESTTHH---HHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHH
T ss_pred eEEEEEeCChhHH---HHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcccCCchhhHHH
Confidence 7888888863 33 223322223654 33444 3333 334443 2444444322 34444433322 44777
Q ss_pred HHHHHHH
Q psy7291 146 EISARIM 152 (158)
Q Consensus 146 ~i~~~l~ 152 (158)
.+++.|.
T Consensus 137 ~lA~~L~ 143 (255)
T 1efv_B 137 MTAGFLD 143 (255)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 7777663
No 192
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=34.33 E-value=24 Score=28.63 Aligned_cols=28 Identities=7% Similarity=0.025 Sum_probs=25.2
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|-+++.|+.+|-
T Consensus 42 vv~p~s~~dv~~~v~~a~~~~~~~~v~g 69 (459)
T 2bvf_A 42 IARCLSAGDVAKSVRYACDNGLEISVRS 69 (459)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEecCCHHHHHHHHHHHHHcCCcEEEEc
Confidence 4689999999999999998888999984
No 193
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=34.25 E-value=1.5e+02 Score=22.35 Aligned_cols=77 Identities=13% Similarity=0.124 Sum_probs=45.9
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 147 (294)
T 2ehh_A 68 GRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTM 147 (294)
T ss_dssp TSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHH
Confidence 44457778886 5677777777777778887777666665556665443 33322 3566666433333 3455555
Q ss_pred HHHH
Q psy7291 149 ARIM 152 (158)
Q Consensus 149 ~~l~ 152 (158)
..|+
T Consensus 148 ~~La 151 (294)
T 2ehh_A 148 FKLA 151 (294)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 194
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=34.24 E-value=91 Score=22.65 Aligned_cols=54 Identities=17% Similarity=0.231 Sum_probs=33.4
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh--CCCeEE
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM--KTNYLI 132 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~--~~~~vv 132 (158)
..|+-+|.........++.|.++|.++.+++-....-.|.+.+.++++ +.+.|+
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEE
T ss_pred ceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEE
Confidence 344444555555556677888888777766544444456677888777 455444
No 195
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=34.21 E-value=58 Score=24.00 Aligned_cols=57 Identities=12% Similarity=0.058 Sum_probs=37.7
Q ss_pred cEEEEEechhH--HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC-----CeEEEEeC
Q psy7291 78 DITIVGHSKAV--ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT-----NYLISVEG 136 (158)
Q Consensus 78 ~~~ii~~G~~~--~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~-----~~vvvvEe 136 (158)
-++|||=|... ..+.++++.|++.|+.+-.|-+. ...+.+.+..+.... ..++.+++
T Consensus 128 ~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG--~~~~~~~L~~iA~~~~~~g~~~~~~~~d 191 (266)
T 4hqo_A 128 LVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIG--QGINHQFNRLIAGCRPREPNCKFYSYAD 191 (266)
T ss_dssp EEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECS--SSCCHHHHHHHHTCCTTCSSCTTEECSC
T ss_pred EEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecC--cccCHHHHHHhhCCCCCCCCCCeEEecC
Confidence 46667777643 36778888999888776666554 367777777777542 35666543
No 196
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=34.12 E-value=1.6e+02 Score=22.60 Aligned_cols=53 Identities=17% Similarity=0.108 Sum_probs=32.3
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccc-------------cCCCHHHHHHHHhCCCeEEE
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSL-------------RPLDIETITKSVMKTNYLIS 133 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l-------------~Pld~~~l~~~~~~~~~vvv 133 (158)
+++|++.|..... .++.+++.|+++-+++..-- ...|.+.+.+++.+.+.|+.
T Consensus 3 ~Ililg~g~~g~~---~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~d~v~~ 68 (380)
T 3ax6_A 3 KIGIIGGGQLGKM---MTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLVKGSDVTTY 68 (380)
T ss_dssp EEEEECCSHHHHH---HHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred EEEEECCCHHHHH---HHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHHhcCCEEEe
Confidence 5788887754443 34446667888888776311 22355677777766654443
No 197
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=33.95 E-value=1.4e+02 Score=22.00 Aligned_cols=73 Identities=8% Similarity=-0.027 Sum_probs=45.4
Q ss_pred cEEEEEechhHHHHHH-HHHH----HHhCCCcEEEEEeccc---------------cCCCHHHHHHHHh-CCCeEEEEeC
Q psy7291 78 DITIVGHSKAVETALD-AAKI----LAGQGIDAEVINLRSL---------------RPLDIETITKSVM-KTNYLISVEG 136 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~e-a~~~----L~~~gi~~~vi~~~~l---------------~Pld~~~l~~~~~-~~~~vvvvEe 136 (158)
-+++++.||....+.+ +.+. +++.-.+..| ...|+ .|-..+.|.++.. +++.|+++==
T Consensus 4 aillv~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V-~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl 82 (264)
T 2xwp_A 4 ALLVVSFGTSYHDTCEKNIVACERDLAASCPDRDL-FRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSL 82 (264)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHHHHHHCTTSEE-EEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEEC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCeE-EeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeC
Confidence 4788999998777666 4443 3333223333 33332 3777777877654 6789999988
Q ss_pred CcCCCChHHHHHHHH
Q psy7291 137 GWPQCGIGSEISARI 151 (158)
Q Consensus 137 ~~~~GG~g~~i~~~l 151 (158)
+...|.--..|.+.+
T Consensus 83 ~l~~G~~~~di~~~v 97 (264)
T 2xwp_A 83 HIINGDEYEKIVREV 97 (264)
T ss_dssp CSSSSHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHH
Confidence 887665445555443
No 198
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=33.92 E-value=63 Score=17.97 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 86 KAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
+.+..+.++...|++.|+.+..+++..
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~~di~~ 35 (75)
T 1r7h_A 9 PACVQCTATKKALDRAGLAYNTVDISL 35 (75)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred CCChHHHHHHHHHHHcCCCcEEEECCC
Confidence 456777788888888899998888764
No 199
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=33.91 E-value=60 Score=24.61 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=26.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
|..++||+.|..... .++.|.+.|.++.||+...
T Consensus 13 ~k~VLVVGgG~va~r---ka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLT---RLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHH---HHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHH---HHHHHHhCCCEEEEEcCCC
Confidence 788999999975443 4567778899999999765
No 200
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=33.90 E-value=39 Score=23.90 Aligned_cols=64 Identities=8% Similarity=0.170 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHhCCCcEE-EEEeccccCCCH------------HHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 87 AVETALDAAKILAGQGIDAE-VINLRSLRPLDI------------ETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 87 ~~~~a~ea~~~L~~~gi~~~-vi~~~~l~Pld~------------~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
....+.+++..+.+.|..++ ++++.-+-.++. +.+.+.+..++.||+.=--+ .+++...+..++
T Consensus 19 ~t~~l~~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD~iv~~sP~y-~~~~~~~lK~~i 95 (193)
T 3svl_A 19 FNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEY-NYSVPGGLKNAI 95 (193)
T ss_dssp HHHHHHHHGGGTSCTTEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSSEEEEEECCB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCCEEEEEeccc-CCCCCHHHHHHH
Confidence 33344444433334567777 777776422222 23455666777777776666 567665555443
No 201
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=33.70 E-value=66 Score=24.69 Aligned_cols=35 Identities=31% Similarity=0.546 Sum_probs=25.4
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++++||+.|.++.... +..|..+|..+++.+-+
T Consensus 159 ~Gk~vvVvGrs~iVG~p~--A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPM--ATMLLNAGATVSVCHIK 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHH--HHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHH--HHHHHHCCCeEEEEeCC
Confidence 489999999888766543 45666778878877644
No 202
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=33.63 E-value=1.5e+02 Score=22.16 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=41.1
Q ss_pred EEEEEech-----hHHHHHHHHHHHHhCCCcEE--EE------------------EeccccCCCHHHHHHHHhCCCeEEE
Q psy7291 79 ITIVGHSK-----AVETALDAAKILAGQGIDAE--VI------------------NLRSLRPLDIETITKSVMKTNYLIS 133 (158)
Q Consensus 79 ~~ii~~G~-----~~~~a~ea~~~L~~~gi~~~--vi------------------~~~~l~Pld~~~l~~~~~~~~~vvv 133 (158)
..|+..|. ....+++|+..|.+++.++. ++ ++.++-+++.+.+.++++..+.++.
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ 278 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAM 278 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEe
Confidence 55555565 35566677766655433333 22 2334556777778888877764444
Q ss_pred EeCCc----CCCChHHHHHHHHH
Q psy7291 134 VEGGW----PQCGIGSEISARIM 152 (158)
Q Consensus 134 vEe~~----~~GG~g~~i~~~l~ 152 (158)
--... ...|+|..+.++++
T Consensus 279 ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 279 PARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp CCCCBGGGTBCCSSCHHHHHHHH
T ss_pred cCccccccccccccCcHHHHHHH
Confidence 22210 11567777777765
No 203
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=33.62 E-value=79 Score=20.41 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=41.6
Q ss_pred cEEEEEechhHHHHHHH----HHHHHhCC--CcEEEEEecc-ccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHH-HHHH
Q psy7291 78 DITIVGHSKAVETALDA----AKILAGQG--IDAEVINLRS-LRPLDIETITKSVMKTNYLISVEGGWPQCGIGS-EISA 149 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea----~~~L~~~g--i~~~vi~~~~-l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~-~i~~ 149 (158)
-+++++.|+.-..+.++ ++.|++.. ..+.+--+.. -.|--.+.+.++ ++++|+++==....|.... .|..
T Consensus 5 alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l--g~~~v~v~Plfl~~G~h~~~di~~ 82 (133)
T 2xws_A 5 GLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM--NCDIIYVVPLFISYGLHVTEDLPD 82 (133)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC--CCSEEEEEECCSSCCHHHHTHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc--CCCEEEEEeeeeCCCcchHhHHHH
Confidence 48889999864333333 33444432 2333332332 246545555555 7789999987776666553 5666
Q ss_pred HHH
Q psy7291 150 RIM 152 (158)
Q Consensus 150 ~l~ 152 (158)
.+.
T Consensus 83 ~~~ 85 (133)
T 2xws_A 83 LLG 85 (133)
T ss_dssp HHT
T ss_pred HHH
Confidence 554
No 204
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=33.51 E-value=1e+02 Score=22.87 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=26.5
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+++++.|....-++-+++.|.+.|.++.|+-+.
T Consensus 62 ~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 62 FVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 344567778888999999999999999997543
No 205
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=33.51 E-value=24 Score=29.23 Aligned_cols=29 Identities=7% Similarity=0.075 Sum_probs=25.7
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEec
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLEN 29 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~ 29 (158)
|+.|.+.+|+..+++.|.+++-|+.+|-.
T Consensus 59 vv~p~s~~dv~~~v~~a~~~~~~~~vrgg 87 (521)
T 2ipi_A 59 VYVVHTADQVVDAVNQAMAAGQRIAVRSG 87 (521)
T ss_dssp EEECSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred EEEcCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 47899999999999999988899999843
No 206
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=33.49 E-value=25 Score=29.31 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=25.8
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEec
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLEN 29 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~~ 29 (158)
|+.|.+.+|+.++++.|.+++-|+.+|-.
T Consensus 57 vv~P~s~~dV~~~v~~a~~~~~~v~vrgg 85 (518)
T 3vte_A 57 IVTPSNNSHIQATILCSKKVGLQIRTRSG 85 (518)
T ss_dssp EECCCSHHHHHHHHHHHHHHTCEEEEESS
T ss_pred EEEeCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 57899999999999999988899999843
No 207
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=33.49 E-value=24 Score=29.27 Aligned_cols=28 Identities=7% Similarity=0.095 Sum_probs=25.4
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+..+++.|.+++-|+.+|-
T Consensus 61 vv~p~s~~dv~~~v~~a~~~~~~~~v~g 88 (523)
T 2wdx_A 61 IHLVGSTQQVADAVEETVRTGKRVAVRS 88 (523)
T ss_dssp EEECSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEEeCCHHHHHHHHHHHHHcCCcEEEEc
Confidence 4789999999999999998889999984
No 208
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=33.23 E-value=1.2e+02 Score=22.63 Aligned_cols=63 Identities=16% Similarity=0.096 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecccc--C-------------------------------CCH--HHHHHHHhCCCeEEE
Q psy7291 89 ETALDAAKILAGQGIDAEVINLRSLR--P-------------------------------LDI--ETITKSVMKTNYLIS 133 (158)
Q Consensus 89 ~~a~ea~~~L~~~gi~~~vi~~~~l~--P-------------------------------ld~--~~l~~~~~~~~~vvv 133 (158)
..+..+++.|++.|..+.++++.-.. | ++. ..+.+.+..++.||+
T Consensus 20 ~la~~~~~~l~~~g~eV~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~l~~AD~IV~ 99 (273)
T 1d4a_A 20 AMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIF 99 (273)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETTTTTCCCCCCGGGBCSCCSSTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEEEccccCCCCcCCHHHHHhhccCcccccchhhhhhhhhcccCcHHHHHHHHHHHhCCEEEE
Confidence 44455567788889999999987643 1 111 223334667787777
Q ss_pred EeCCcCCCChHHHHHHHHH
Q psy7291 134 VEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 134 vEe~~~~GG~g~~i~~~l~ 152 (158)
.=--+ .+++.+.+..++-
T Consensus 100 ~~P~y-~~s~Pa~LK~~iD 117 (273)
T 1d4a_A 100 QFPLQ-WFGVPAILKGWFE 117 (273)
T ss_dssp EEECB-TTBCCHHHHHHHH
T ss_pred ECchh-hccCCHHHHHHHH
Confidence 76666 6788777766654
No 209
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=33.02 E-value=70 Score=22.77 Aligned_cols=31 Identities=10% Similarity=0.209 Sum_probs=24.6
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhCCCcEEEE
Q psy7291 78 DITIVGHSK-AVETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 78 ~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi 108 (158)
++++.-+|+ .+..+.+.++.|++.|.++.++
T Consensus 3 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv 34 (189)
T 2ejb_A 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLV 34 (189)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 477777786 4567888889999889888887
No 210
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=32.90 E-value=1.4e+02 Score=22.32 Aligned_cols=56 Identities=16% Similarity=0.180 Sum_probs=29.3
Q ss_pred HhCCCcEEEEEe-ccccCCCHHHHHHHHhC-CCeEEEEeCC-cCCCChH--HHHHHHHHcC
Q psy7291 99 AGQGIDAEVINL-RSLRPLDIETITKSVMK-TNYLISVEGG-WPQCGIG--SEISARIMEI 154 (158)
Q Consensus 99 ~~~gi~~~vi~~-~~l~Pld~~~l~~~~~~-~~~vvvvEe~-~~~GG~g--~~i~~~l~~~ 154 (158)
+..|.++..+++ ..-..+|.+.+.+.++. ..++++++.. +..|-.- +.|.+...++
T Consensus 106 ~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~ 166 (385)
T 2bkw_A 106 RSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQT 166 (385)
T ss_dssp HHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHH
T ss_pred HHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhh
Confidence 344666555554 32233677777776654 3356666653 3334321 4566666554
No 211
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=32.83 E-value=1.1e+02 Score=23.13 Aligned_cols=78 Identities=21% Similarity=0.129 Sum_probs=44.4
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 68 gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~ 147 (292)
T 2vc6_A 68 GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETL 147 (292)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHH
Confidence 33346677776 5567777777777778887777666665556665443 33322 3566665433333 2444544
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 148 ~~La~ 152 (292)
T 2vc6_A 148 ARIFE 152 (292)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44444
No 212
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=32.72 E-value=1.3e+02 Score=22.73 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=42.5
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 75 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 154 (297)
T 3flu_A 75 KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTI 154 (297)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHH
T ss_pred CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHH
Confidence 34456667775 5677777777777778777666666655555554333 22222 3566655322222 2444444
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 155 ~~La~ 159 (297)
T 3flu_A 155 LRLAE 159 (297)
T ss_dssp HHHTT
T ss_pred HHHHc
Confidence 44543
No 213
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=32.72 E-value=26 Score=29.64 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=23.5
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
|+.|.+.+|+.++++.|.+++-|+.+|
T Consensus 141 vv~P~s~eeV~~iv~~a~~~~~pv~~~ 167 (584)
T 2uuu_A 141 IVLPHSHEEVERLVQLAHKYNVVIIPM 167 (584)
T ss_dssp EECCCSHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 468999999999999998877777776
No 214
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=32.57 E-value=1.3e+02 Score=23.03 Aligned_cols=78 Identities=14% Similarity=0.057 Sum_probs=43.5
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 91 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 170 (314)
T 3qze_A 91 GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETV 170 (314)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHH
Confidence 44456677775 5677777777777778877766666555556554333 33322 3566665322222 2444444
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 171 ~~La~ 175 (314)
T 3qze_A 171 ERLSK 175 (314)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 44443
No 215
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.55 E-value=48 Score=25.69 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=24.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
|+|++||+-|...-. |+..|++.| ++.+|+-..
T Consensus 8 ~~~vvIIGgG~AGl~---aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFE---LAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHH---HHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHH---HHHHHhhcC-CEEEEECCC
Confidence 899999999975443 456677778 999997654
No 216
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=32.52 E-value=99 Score=23.88 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=25.7
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
.|++++||+.|.++... ++..|...|..+++.+-++
T Consensus 164 ~Gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAP--VAALLMKENATVTIVHSGT 199 (300)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTS
T ss_pred CCCEEEEECCCchHHHH--HHHHHHHCCCeEEEEeCCC
Confidence 48899999988765554 3456667788888877543
No 217
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=32.51 E-value=95 Score=20.74 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=38.8
Q ss_pred CcEEEEEechh----HHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC
Q psy7291 77 KDITIVGHSKA----VETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG 136 (158)
Q Consensus 77 ~~~~ii~~G~~----~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe 136 (158)
+-++++|=|.. .....++++.+++.|+.+-.|-+. ..+.+.+.++....+.++.+.+
T Consensus 105 ~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg---~~~~~~L~~ia~~~~~~~~~~~ 165 (182)
T 1shu_X 105 SIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVL---DFEQAQLERIADSKEQVFPVKG 165 (182)
T ss_dssp EEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECS---SCCHHHHHHHSSSGGGEEESSS
T ss_pred eEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCC---cCCHHHHHHHhCCCCceEEccC
Confidence 34666766642 233456777888888877777665 6788888888877677776653
No 218
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=32.46 E-value=1.6e+02 Score=22.29 Aligned_cols=78 Identities=17% Similarity=0.095 Sum_probs=46.8
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 84 grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~ 163 (304)
T 3cpr_A 84 DRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTM 163 (304)
T ss_dssp TTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHH
T ss_pred CCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHH
Confidence 44457788886 5677777777777778887777666665556655443 33322 3566666433333 2455555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 164 ~~La~ 168 (304)
T 3cpr_A 164 RRLSE 168 (304)
T ss_dssp HHHTT
T ss_pred HHHHc
Confidence 55554
No 219
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=32.32 E-value=74 Score=24.42 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=31.7
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEE
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLI 132 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vv 132 (158)
.|++++||+.|.++... ++..|..+|..+++.+-++ ..+.+.++..+-|+
T Consensus 160 ~Gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~hs~t------~~L~~~~~~ADIVI 209 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKP--VSQLLLNAKATVTTCHRFT------TDLKSHTTKADILI 209 (285)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTC------SSHHHHHTTCSEEE
T ss_pred CCCEEEEECCCchhHHH--HHHHHHHCCCeEEEEeCCc------hhHHHhcccCCEEE
Confidence 48899999988866554 3456667787777775432 12455555554333
No 220
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=32.12 E-value=1.1e+02 Score=21.54 Aligned_cols=55 Identities=15% Similarity=0.226 Sum_probs=38.2
Q ss_pred HHHhC--CCcEEEEEeccccC---------CC-H--HHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 97 ILAGQ--GIDAEVINLRSLRP---------LD-I--ETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 97 ~L~~~--gi~~~vi~~~~l~P---------ld-~--~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
.|++. |..++++++.-+.+ ++ . +.+.+.+...+.||+.=--+ .+++...+..++-
T Consensus 41 ~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~AD~ivi~sP~Y-~~~~~~~lK~~iD 109 (191)
T 3k1y_A 41 AVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSASDGLVVATPVF-KASYTGLFKMFFD 109 (191)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHHCSEEEEEEECB-TTBSCHHHHHHHH
T ss_pred HHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHHCCEEEEEcCcc-CCcCcHHHHHHHH
Confidence 56665 78899999876531 12 2 24566666788888887777 7888888777764
No 221
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.08 E-value=71 Score=24.19 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=38.4
Q ss_pred cEEEEEech----hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH---HhC----CCeEEEEeCC
Q psy7291 78 DITIVGHSK----AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS---VMK----TNYLISVEGG 137 (158)
Q Consensus 78 ~~~ii~~G~----~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~---~~~----~~~vvvvEe~ 137 (158)
..+||.+|+ .-..+.+.++.++++||.+.+|.+-.-. .+.+.+..+ ... ..++++|-.+
T Consensus 108 ~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~-~n~~kLe~l~~~~Ng~~~~~s~~v~v~~g 177 (268)
T 4b4t_W 108 QRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIE-QNTELLDEFIAAVNNPQEETSHLLTVTPG 177 (268)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCC-SSCCHHHHHHHHHCSSTTTSCEEEEECCC
T ss_pred eEEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCc-cchHHHHHHHHHhcCCCCCceeEEEeCCC
Confidence 344444443 3356778889999999999999998743 344444444 432 3568888654
No 222
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=32.04 E-value=62 Score=23.54 Aligned_cols=68 Identities=15% Similarity=0.077 Sum_probs=36.5
Q ss_pred CCcEEEEEech----hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 76 GKDITIVGHSK----AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 76 g~~~~ii~~G~----~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
.+++++|.||+ .-.....+.+.|++-|.++.+++.. +. ..+.+...+.|++ .||=...+...|
T Consensus 31 ~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~-----~d--~~~~l~~ad~I~l------pGG~~~~~~~~l 97 (229)
T 1fy2_A 31 RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRV-----AD--PLAAIEKAEIIIV------GGGNTFQLLKES 97 (229)
T ss_dssp CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSS-----SC--HHHHHHHCSEEEE------CCSCHHHHHHHH
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEecc-----cc--HHHHHhcCCEEEE------CCCcHHHHHHHH
Confidence 57899999984 1122333444455557654444321 21 2244455665554 466556666666
Q ss_pred HcCCC
Q psy7291 152 MEIPY 156 (158)
Q Consensus 152 ~~~~~ 156 (158)
.+.|+
T Consensus 98 ~~~gl 102 (229)
T 1fy2_A 98 RERGL 102 (229)
T ss_dssp HHTTC
T ss_pred HHCCh
Confidence 66553
No 223
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=31.82 E-value=91 Score=23.64 Aligned_cols=56 Identities=14% Similarity=0.298 Sum_probs=25.8
Q ss_pred hCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 100 GQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 100 ~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
..|.++..+.+..=..+|.+.+.+.+....++++++. +++.|-.- .+|.+...++|
T Consensus 131 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~ 189 (400)
T 3vax_A 131 GRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATP 189 (400)
T ss_dssp TTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSS
T ss_pred hcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcC
Confidence 3455554444332233455555555544345555555 33333321 44555554443
No 224
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=31.81 E-value=77 Score=23.02 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=26.6
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi 108 (158)
+++++|--+|+ .+..+.+.++.|.+.|.++.++
T Consensus 4 ~k~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv 37 (209)
T 3zqu_A 4 PERITLAMTGASGAQYGLRLLDCLVQEEREVHFL 37 (209)
T ss_dssp CSEEEEEECSSSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45677777776 5677888899999999999887
No 225
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=31.74 E-value=93 Score=23.32 Aligned_cols=58 Identities=24% Similarity=0.284 Sum_probs=26.9
Q ss_pred HHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 98 LAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 98 L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
++..|.++..+++..-..+|.+.+.+.+....++++++. +++.|-.- ..|.+...++|
T Consensus 108 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 168 (382)
T 4eb5_A 108 LQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKA 168 (382)
T ss_dssp HTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSS
T ss_pred HHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCC
Confidence 333455554444332222566666666654334556654 22333321 45555554443
No 226
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=31.57 E-value=63 Score=24.97 Aligned_cols=57 Identities=16% Similarity=0.266 Sum_probs=36.3
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC----HHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD----IETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld----~~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|+..|.++.+++...-+.+. ...+.++++..+.|++
T Consensus 144 l~g~~vgIiG~G~IG~~~---A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~ 204 (331)
T 1xdw_A 144 VRNCTVGVVGLGRIGRVA---AQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITI 204 (331)
T ss_dssp GGGSEEEEECCSHHHHHH---HHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEE
T ss_pred CCCCEEEEECcCHHHHHH---HHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEE
Confidence 447889999999998775 44555668888887754321111 1135667776665444
No 227
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=31.53 E-value=46 Score=23.79 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=21.0
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
...++|+++|..... .++.|.++|. +.+++.
T Consensus 9 ~~~viI~G~G~~G~~---la~~L~~~g~-v~vid~ 39 (234)
T 2aef_A 9 SRHVVICGWSESTLE---CLRELRGSEV-FVLAED 39 (234)
T ss_dssp -CEEEEESCCHHHHH---HHHHSTTSEE-EEEESC
T ss_pred CCEEEEECCChHHHH---HHHHHHhCCe-EEEEEC
Confidence 457899999866654 4566777777 777753
No 228
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=31.51 E-value=36 Score=23.17 Aligned_cols=75 Identities=17% Similarity=0.023 Sum_probs=44.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChH--HHHHHHHHcC
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIG--SEISARIMEI 154 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g--~~i~~~l~~~ 154 (158)
+-.++|++|-......++.+.|++.|+....+.. -.|-........+++....+.+|+... |++. .+|.+.+.+.
T Consensus 40 G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~--n~P~~~~~~~~~~rK~~~~~fIDDR~~-~~~~dw~~i~~~~~~~ 116 (142)
T 2obb_A 40 KHRLILWSVREGELLDEAIEWCRARGLEFYAANK--DYPEEERDHQGFSRKLKADLFIDDRNV-GGIPDWGIIYEMIKEK 116 (142)
T ss_dssp TCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS--SSTTC---CCSCCSSCCCSEEECTTST-TCCCCHHHHHHHHHHT
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc--CCchhhhcchhhcCCcCCCEEeecccc-CCCCCHHHHHHHHHhh
Confidence 4567788887666666677778888887766633 234221111123556667777998774 5543 4566665543
No 229
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=31.48 E-value=68 Score=24.63 Aligned_cols=36 Identities=28% Similarity=0.259 Sum_probs=25.6
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
.|++++||+.|.++...+ +..|...|..+++.+-++
T Consensus 160 ~Gk~vvVvGrs~iVG~pl--A~lL~~~gAtVtv~hs~T 195 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPM--ALELLLGGCTVTVTHRFT 195 (286)
T ss_dssp TTCEEEEECTTSTTHHHH--HHHHHHTTCEEEEECTTC
T ss_pred CCCEEEEECCCchhHHHH--HHHHHHCCCeEEEEeCCC
Confidence 489999999887665543 456667788888776543
No 230
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=31.44 E-value=1.1e+02 Score=23.74 Aligned_cols=56 Identities=13% Similarity=0.204 Sum_probs=34.8
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC----HHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD----IETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld----~~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|...|.++.+++... .... ...+.++++..+.|++
T Consensus 162 l~g~~vgIIG~G~iG~~v---A~~l~~~G~~V~~~dr~~-~~~~g~~~~~~l~ell~~aDvVil 221 (333)
T 3ba1_A 162 FSGKRVGIIGLGRIGLAV---AERAEAFDCPISYFSRSK-KPNTNYTYYGSVVELASNSDILVV 221 (333)
T ss_dssp CTTCCEEEECCSHHHHHH---HHHHHTTTCCEEEECSSC-CTTCCSEEESCHHHHHHTCSEEEE
T ss_pred cCCCEEEEECCCHHHHHH---HHHHHHCCCEEEEECCCc-hhccCceecCCHHHHHhcCCEEEE
Confidence 447889999999998765 445666688887776432 1110 1135566666654443
No 231
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=31.43 E-value=45 Score=19.74 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=35.7
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHH-h-CCCeEEEEeCCcCCCChHHHHHHHH
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSV-M-KTNYLISVEGGWPQCGIGSEISARI 151 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~-~-~~~~vvvvEe~~~~GG~g~~i~~~l 151 (158)
+++.+. +.+..+..+...|++.+++...+++. +-..+.+.+.. . ..-.++++ ++...||+.. +.+++
T Consensus 8 v~~y~~-~~C~~C~~~~~~L~~~~i~~~~vdv~---~~~~~~l~~~~~~~~~vP~l~~-~g~~i~g~~~-i~~~~ 76 (89)
T 2klx_A 8 IILYTR-PNCPYCKRARDLLDKKGVKYTDIDAS---TSLRQEMVQRANGRNTFPQIFI-GDYHVGGCDD-LYALE 76 (89)
T ss_dssp EEEESC-SCCTTTHHHHHHHHHHTCCEEEECSC---HHHHHHHHHHHHSSCCSCEEEE-TTEECCSHHH-HHHHH
T ss_pred EEEEEC-CCChhHHHHHHHHHHcCCCcEEEECC---HHHHHHHHHHhCCCCCcCEEEE-CCEEEeChHH-HHHHH
Confidence 444332 44556666667777778888888776 11123344433 2 12234455 5556788744 44443
No 232
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=31.42 E-value=28 Score=29.30 Aligned_cols=28 Identities=11% Similarity=0.035 Sum_probs=25.2
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|.+++.|+.+|-
T Consensus 33 vv~P~s~eEV~~~Vk~A~~~~~pv~v~G 60 (540)
T 3js8_A 33 TCAPRSADEVVKVANWAKDNGYKVRARG 60 (540)
T ss_dssp EECCSSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred EEEcCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4689999999999999999889999973
No 233
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=31.18 E-value=1.1e+02 Score=23.08 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=27.7
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETI 121 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l 121 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+
T Consensus 69 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l 115 (291)
T 3tak_A 69 KRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGL 115 (291)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHH
Confidence 33445667775 55666666666666677766666655555555543
No 234
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=31.08 E-value=53 Score=22.09 Aligned_cols=77 Identities=16% Similarity=0.123 Sum_probs=44.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHH---HHHHHHh-CCCeEEEEeCCcCCCChHH-------
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIE---TITKSVM-KTNYLISVEGGWPQCGIGS------- 145 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~---~l~~~~~-~~~~vvvvEe~~~~GG~g~------- 145 (158)
..++|++ -+.+..+..+...|.+.++....+++... +-+.+ .+.+... ..-..+++ ++...||+..
T Consensus 49 ~~Vvvf~-~~~Cp~C~~~k~~L~~~~i~~~~vdId~~-~~~~~~~~~L~~~~g~~tvP~ifi-~G~~igG~d~l~~l~~~ 125 (146)
T 2ht9_A 49 NCVVIFS-KTSCSYCTMAKKLFHDMNVNYKVVELDLL-EYGNQFQDALYKMTGERTVPRIFV-NGTFIGGATDTHRLHKE 125 (146)
T ss_dssp CSEEEEE-CTTCHHHHHHHHHHHHHTCCCEEEEGGGC-TTHHHHHHHHHHHHSCCCSCEEEE-TTEEEESHHHHHHHHHT
T ss_pred CCEEEEE-CCCChhHHHHHHHHHHcCCCeEEEECccC-cCCHHHHHHHHHHhCCCCcCeEEE-CCEEEeCchHHHHHHHc
Confidence 3565543 36678888888888888999888887653 11012 2333332 22234455 4556788632
Q ss_pred -HHHHHHHcCCC
Q psy7291 146 -EISARIMEIPY 156 (158)
Q Consensus 146 -~i~~~l~~~~~ 156 (158)
.+.+.|.+.|+
T Consensus 126 g~L~~~L~~~g~ 137 (146)
T 2ht9_A 126 GKLLPLVHQCYL 137 (146)
T ss_dssp TCHHHHHHHTTC
T ss_pred ChHHHHHHHcCc
Confidence 35566666555
No 235
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=31.01 E-value=16 Score=29.07 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=23.9
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEE
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFL 27 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR 27 (158)
++.|.+.+|+.++++++.+++-|++++
T Consensus 34 vv~p~s~eel~~~v~~a~~~~ipv~vl 60 (357)
T 3i99_A 34 LVVAESIDDLKALYCSAEWASLPKLII 60 (357)
T ss_dssp EEEECSHHHHHHHHSSSTTTTSCEEEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCEEEE
Confidence 467999999999999998888899886
No 236
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.97 E-value=1.4e+02 Score=22.61 Aligned_cols=78 Identities=12% Similarity=-0.012 Sum_probs=45.9
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC--CeEEEEeCCcCCC-ChHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT--NYLISVEGGWPQC-GIGSEI 147 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~--~~vvvvEe~~~~G-G~g~~i 147 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+ +++.. -.|+...--...| .+..+.
T Consensus 79 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~ 158 (303)
T 2wkj_A 79 GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQ 158 (303)
T ss_dssp TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHH
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHH
Confidence 44457778886 5577777777777778887777666665556665443 33322 3577766433333 245555
Q ss_pred HHHHHc
Q psy7291 148 SARIME 153 (158)
Q Consensus 148 ~~~l~~ 153 (158)
...|++
T Consensus 159 ~~~La~ 164 (303)
T 2wkj_A 159 INTLVT 164 (303)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 555554
No 237
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=30.97 E-value=36 Score=28.19 Aligned_cols=28 Identities=43% Similarity=0.502 Sum_probs=24.5
Q ss_pred CcccCCHHHHHHHHHHHHh-CCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIR-DPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~-~~~P~~iR~ 28 (158)
|+.|.+.+|+..+++.|.+ ++-|+.+|-
T Consensus 65 vv~P~s~eeV~~iv~~a~~~~~~~v~~~G 93 (524)
T 2exr_A 65 VVRPVGPEDIAGAVKAALRSDKLTVAARG 93 (524)
T ss_dssp EEECSSHHHHHHHHHHHHHSSSCCEEEES
T ss_pred EEecCCHHHHHHHHHHHHhhcCceEEEEC
Confidence 4789999999999999995 788999873
No 238
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=30.90 E-value=1.4e+02 Score=22.37 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=45.3
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 68 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~ 147 (289)
T 2yxg_A 68 GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTV 147 (289)
T ss_dssp TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHH
Confidence 44457778886 5577777777777778887777666666556665443 33322 3566666433333 2455555
Q ss_pred HHHH
Q psy7291 149 ARIM 152 (158)
Q Consensus 149 ~~l~ 152 (158)
..|+
T Consensus 148 ~~La 151 (289)
T 2yxg_A 148 KLLA 151 (289)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4554
No 239
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=30.90 E-value=1.2e+02 Score=22.70 Aligned_cols=57 Identities=19% Similarity=0.106 Sum_probs=39.0
Q ss_pred EEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHHHHHHH----HhCC-CeEEEEeC
Q psy7291 80 TIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRP-LDIETITKS----VMKT-NYLISVEG 136 (158)
Q Consensus 80 ~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~~l~~~----~~~~-~~vvvvEe 136 (158)
+|+++|+ .+..+.+-++..++.|.+.-++-.++.++ .+.+.+.+. ++.. -.|+...-
T Consensus 67 vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 130 (286)
T 2r91_A 67 VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNY 130 (286)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 8888887 66778887888888899887777777665 566655433 3322 35666654
No 240
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=30.88 E-value=88 Score=24.16 Aligned_cols=57 Identities=9% Similarity=0.163 Sum_probs=35.3
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC----HHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD----IETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld----~~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|+.-|.++.+++...-+.+. ...+.++++..+.|++
T Consensus 143 l~g~~vgIiG~G~IG~~~---A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~ 203 (333)
T 1dxy_A 143 LGQQTVGVMGTGHIGQVA---IKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDL 203 (333)
T ss_dssp GGGSEEEEECCSHHHHHH---HHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEE
T ss_pred CCCCEEEEECcCHHHHHH---HHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEE
Confidence 457889999999998875 44555668888777754321111 1135566666554443
No 241
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=30.88 E-value=1.7e+02 Score=21.89 Aligned_cols=57 Identities=11% Similarity=0.081 Sum_probs=31.1
Q ss_pred hCCCcEEEEEeccccCCCHHHHHHHHh--CCCeEEEEeC-CcCCCChH--HHHHHHHHcCCC
Q psy7291 100 GQGIDAEVINLRSLRPLDIETITKSVM--KTNYLISVEG-GWPQCGIG--SEISARIMEIPY 156 (158)
Q Consensus 100 ~~gi~~~vi~~~~l~Pld~~~l~~~~~--~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~~ 156 (158)
..|.++..+....-..+|.+.+.+.++ ...++++++. ++..|-.- ..|.+...++|.
T Consensus 116 ~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 177 (386)
T 2dr1_A 116 SNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDK 177 (386)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTC
T ss_pred HhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCC
Confidence 346665555544323367777777773 2235666664 33444332 566666666653
No 242
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=30.75 E-value=1.1e+02 Score=23.32 Aligned_cols=77 Identities=19% Similarity=0.129 Sum_probs=44.3
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 80 grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 159 (306)
T 1o5k_A 80 GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETA 159 (306)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHH
Confidence 33346677776 5566777666666668887777666665556665443 33332 3566665433333 2455555
Q ss_pred HHHH
Q psy7291 149 ARIM 152 (158)
Q Consensus 149 ~~l~ 152 (158)
..|+
T Consensus 160 ~~La 163 (306)
T 1o5k_A 160 ARIA 163 (306)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4554
No 243
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=30.72 E-value=62 Score=24.25 Aligned_cols=33 Identities=9% Similarity=0.135 Sum_probs=26.8
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+++++.|....-++-+++.|...|.++.|+-+.
T Consensus 89 lVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 89 ALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 344567788889999999999999999997554
No 244
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=30.69 E-value=1.2e+02 Score=20.32 Aligned_cols=57 Identities=23% Similarity=0.260 Sum_probs=33.0
Q ss_pred HHHHHHhCCCcEEEEEeccccC-----------------CCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 94 AAKILAGQGIDAEVINLRSLRP-----------------LDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 94 a~~~L~~~gi~~~vi~~~~l~P-----------------ld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
.++.+.+ ++.+.++++..... -|.+.+.+.+..++.|++.=--+ .|++...+..++-
T Consensus 22 la~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~~P~y-~~~~p~~lK~~iD 95 (184)
T 1rli_A 22 LAEKAVQ-GFDAEHIYLQKYPIQPIEDLRHAQGGFRPVQDDYDSIIERILQCHILIFATPIY-WFGMSGTLKLFID 95 (184)
T ss_dssp HHHHHHT-TTCCEEEEC-----------------------CHHHHHHHHHTCSEEEEEEECB-TTBCCHHHHHHHH
T ss_pred HHHHHHc-CCeEEEEEcCCCCCccCCccccccCCCCCCCCCHHHHHHHHHhCCEEEEEeCcc-ccCCcHHHHHHHH
Confidence 3443333 66778887765421 12344556667788888877666 6788777766654
No 245
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=30.64 E-value=1.7e+02 Score=21.86 Aligned_cols=56 Identities=11% Similarity=-0.095 Sum_probs=27.2
Q ss_pred hCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-CcCCCCh--HHHHHHHHHcCC
Q psy7291 100 GQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-GWPQCGI--GSEISARIMEIP 155 (158)
Q Consensus 100 ~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-~~~~GG~--g~~i~~~l~~~~ 155 (158)
..|..+..+....-..+|.+.+.+.+...-+++++.. +...|-. =..|++...++|
T Consensus 116 ~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 174 (376)
T 3f0h_A 116 IHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNN 174 (376)
T ss_dssp HTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTT
T ss_pred HcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcC
Confidence 3466666655543344666666555443334555552 2223322 245555555554
No 246
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=30.63 E-value=93 Score=24.00 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=29.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec-cccCCCHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR-SLRPLDIE 119 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~-~l~Pld~~ 119 (158)
+.+++||+-|.. ++|.+..|.+.|.+++++... .+-|+|.+
T Consensus 143 ~~~vvViGgG~~---g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~ 184 (367)
T 1xhc_A 143 SGEAIIIGGGFI---GLELAGNLAEAGYHVKLIHRGAMFLGLDEE 184 (367)
T ss_dssp HSEEEEEECSHH---HHHHHHHHHHTTCEEEEECSSSCCTTCCHH
T ss_pred CCcEEEECCCHH---HHHHHHHHHhCCCEEEEEeCCCeeccCCHH
Confidence 478999988864 455667788889999999653 34457764
No 247
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=30.62 E-value=1.7e+02 Score=22.68 Aligned_cols=39 Identities=10% Similarity=0.095 Sum_probs=19.6
Q ss_pred CHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 117 DIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 117 d~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
|.+.+.+.++...+++++|. +++.|-.- ..|++...++|
T Consensus 140 d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g 181 (403)
T 3cog_A 140 KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHG 181 (403)
T ss_dssp SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSS
T ss_pred CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcC
Confidence 45556555554335666664 33344332 45555555544
No 248
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.53 E-value=1.3e+02 Score=22.68 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=43.8
Q ss_pred EEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHHHHHH----HHhCC----CeEEEEeCCcCCC-ChHHHH
Q psy7291 79 ITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRP-LDIETITK----SVMKT----NYLISVEGGWPQC-GIGSEI 147 (158)
Q Consensus 79 ~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~~l~~----~~~~~----~~vvvvEe~~~~G-G~g~~i 147 (158)
-+|+++|+ .+..+.+-++..++.|.+.-++-.++..+ .+.+.+.+ +++.. -.|+...--...| -+..+.
T Consensus 74 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~ 153 (294)
T 3b4u_A 74 RIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVEL 153 (294)
T ss_dssp GEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHH
T ss_pred cEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHH
Confidence 46677776 56777777777777788877776666655 56655433 33332 3567666433333 245555
Q ss_pred HHHHH
Q psy7291 148 SARIM 152 (158)
Q Consensus 148 ~~~l~ 152 (158)
...|+
T Consensus 154 ~~~La 158 (294)
T 3b4u_A 154 VGRLK 158 (294)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 249
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=30.39 E-value=1.1e+02 Score=19.64 Aligned_cols=67 Identities=9% Similarity=-0.019 Sum_probs=39.4
Q ss_pred CcEEEEEechhHHHHHHH----HHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeCCcCCCCh
Q psy7291 77 KDITIVGHSKAVETALDA----AKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEGGWPQCGI 143 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea----~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe~~~~GG~ 143 (158)
.-+++++.|+.-..+.+. ++.+++....+.+--+.+-.|--++.+.++.. +.++|+++==....|.-
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H 77 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRH 77 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSCCCHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccCCCch
Confidence 458889999854433322 33455444344444444445755666766654 56788888766655543
No 250
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=30.34 E-value=48 Score=24.86 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=23.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|++||+-|..-.. ++-.|.+.|.++.|++-.
T Consensus 4 ~~dvvIIG~G~~Gl~---~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLA---IARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHH---HHHHHHhCCCeEEEEeCC
Confidence 358999999875433 344566679999999765
No 251
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=30.26 E-value=1e+02 Score=23.21 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=44.1
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 69 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~ 148 (292)
T 2ojp_A 69 GRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETV 148 (292)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHH
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHH
Confidence 33346677776 5566777677666778887666666665556665443 33332 3566655333233 2455555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 149 ~~La~ 153 (292)
T 2ojp_A 149 GRLAK 153 (292)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55544
No 252
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=30.21 E-value=1.2e+02 Score=22.82 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=38.4
Q ss_pred EEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHHHHHHH----HhCC-CeEEEEeC
Q psy7291 80 TIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRP-LDIETITKS----VMKT-NYLISVEG 136 (158)
Q Consensus 80 ~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~~l~~~----~~~~-~~vvvvEe 136 (158)
+|+++|+ .+..+.+-++..++.|.+.-++-.++.++ .+.+.+.+. ++.. -.|+...-
T Consensus 68 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (293)
T 1w3i_A 68 IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNY 131 (293)
T ss_dssp EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 7888887 56777777777778898877777776665 566655433 3322 35666654
No 253
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=30.19 E-value=51 Score=25.65 Aligned_cols=30 Identities=23% Similarity=0.214 Sum_probs=22.7
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
|++||+-|...-. |+..|.+.|.++.|+.-
T Consensus 3 dVvVIGaG~aGl~---aA~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFSGLK---AARDLTNAGKKVLLLEG 32 (431)
T ss_dssp EEEEECCBHHHHH---HHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHHHH---HHHHHHHcCCeEEEEec
Confidence 6999998865432 45577778999999975
No 254
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=30.15 E-value=51 Score=25.36 Aligned_cols=48 Identities=23% Similarity=0.368 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC----CeEEEEeC
Q psy7291 89 ETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT----NYLISVEG 136 (158)
Q Consensus 89 ~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~----~~vvvvEe 136 (158)
.....++++|+.-|+..+++-.|+=+|++++...++..-+ +.|+.+-+
T Consensus 217 KPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~Vi~~~D 268 (294)
T 2c5m_A 217 KPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQVICVHD 268 (294)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSCCEECCC
T ss_pred CCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHHEEecCC
Confidence 3445567788888999999999999999998766655432 34554444
No 255
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=29.99 E-value=70 Score=22.23 Aligned_cols=72 Identities=11% Similarity=0.058 Sum_probs=36.6
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHc
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIME 153 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~ 153 (158)
+++|| |||......+.++.+.+ ++.-..+++.....+++.. .+-+..++.|++.=-.+ .|++...+..++..
T Consensus 8 kilii-y~S~~GnT~~lA~~ia~-~l~~~~~~v~~~~~~~~~~-~~~l~~~D~ii~gsP~y-~g~~~~~~k~fld~ 79 (193)
T 3d7n_A 8 NTVVV-YHSGYGHTHRMAEAVAE-GAEATLHAIDAEGNLSEDG-WAALDAADAIIFGTPTY-MGGPSWQFKKFADA 79 (193)
T ss_dssp CEEEE-ECCSSSHHHHHHHHHHH-HHTCEEEECCTTSCCCHHH-HHHHHHCSEEEEEEEEE-TTEECHHHHHHHHH
T ss_pred EEEEE-EECCChHHHHHHHHHHH-HhhhcceEeeecCCCCHhH-HHHHHHCCEEEEEeCcc-CCCccHHHHHHHHH
Confidence 44444 45544444444433322 1222455554322355433 34455677777775554 57777777776643
No 256
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=29.92 E-value=1.4e+02 Score=21.27 Aligned_cols=63 Identities=21% Similarity=0.237 Sum_probs=38.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCH---HHHHHHHhCCCeEEEEeCCcCCCCh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDI---ETITKSVMKTNYLISVEGGWPQCGI 143 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~---~~l~~~~~~~~~vvvvEe~~~~GG~ 143 (158)
+.|+++++++...+. +.+...-+.|. .+++...+.+-+. +.+.+.+++.+..+.++.+. .||+
T Consensus 50 ~~DvVv~~~~~~~~~--~~~~~~l~~G~--~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~-~g~~ 115 (236)
T 2dc1_A 50 EMDVAVEAASQQAVK--DYAEKILKAGI--DLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGA-IGGL 115 (236)
T ss_dssp CCSEEEECSCHHHHH--HHHHHHHHTTC--EEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTT-CSCH
T ss_pred CCCEEEECCCHHHHH--HHHHHHHHCCC--cEEEECcccCChHHHHHHHHHHHHhcCCeEEecCcc-ccCh
Confidence 679999999876332 33333334454 4776666555445 45666666655556688776 5776
No 257
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=29.89 E-value=1.3e+02 Score=22.69 Aligned_cols=57 Identities=12% Similarity=0.018 Sum_probs=39.3
Q ss_pred EEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHHHHHH----HHhCC-CeEEEEeC
Q psy7291 80 TIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRP-LDIETITK----SVMKT-NYLISVEG 136 (158)
Q Consensus 80 ~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~~l~~----~~~~~-~~vvvvEe 136 (158)
+|+++|+ .+..+.+-++..++.|.+.-++-.++..+ .+.+.+.+ +++.. -.|+...-
T Consensus 68 ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (288)
T 2nuw_A 68 LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNY 131 (288)
T ss_dssp EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 8888887 66778888888888899887777777665 57665543 33322 35666654
No 258
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=29.85 E-value=65 Score=25.24 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=36.7
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC-----CCH-HHHHHHHhCCCeEEE
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP-----LDI-ETITKSVMKTNYLIS 133 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-----ld~-~~l~~~~~~~~~vvv 133 (158)
...|..+.||++|.+...+ ++.|+.-|.++..++.....+ ... +.+.++++..+.|++
T Consensus 170 ~l~gktvGIIGlG~IG~~v---A~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l 233 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAI---ATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLI 233 (345)
T ss_dssp CCTTCEEEEESCSHHHHHH---HHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEE
T ss_pred ccCCCEEEEEEeChhHHHH---HHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEE
Confidence 3557899999999988765 445666688887777543111 000 246677777664443
No 259
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=29.71 E-value=49 Score=27.34 Aligned_cols=59 Identities=17% Similarity=0.376 Sum_probs=38.6
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCC-------CHHHHHHHHhCCCeEEEEe
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPL-------DIETITKSVMKTNYLISVE 135 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pl-------d~~~l~~~~~~~~~vvvvE 135 (158)
..|..+.||++|.+...+.+. |+..|.++.+++....+.+ ....+.++++..+-|++.-
T Consensus 255 l~GktVgIIG~G~IG~~vA~~---l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~ 320 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASS---MKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT 320 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHH---HHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC
T ss_pred cCCCEEEEEeeCHHHHHHHHH---HHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC
Confidence 347899999999988775444 4444888888876543211 1123667787777666663
No 260
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=29.67 E-value=97 Score=20.04 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=25.8
Q ss_pred cEEEEEec---hhHHHHHHHHHHHHhCCCcEEEEEeccc
Q psy7291 78 DITIVGHS---KAVETALDAAKILAGQGIDAEVINLRSL 113 (158)
Q Consensus 78 ~~~ii~~G---~~~~~a~ea~~~L~~~gi~~~vi~~~~l 113 (158)
++.++=.| +....+-++.+.|++.|++..+=-+.+.
T Consensus 19 ~~sv~Plg~~~svs~~Va~~i~vi~~sGL~y~~~pmgT~ 57 (106)
T 1vk8_A 19 SIKVVPAVEDGRLHEVIDRAIEKISSWGMKYEVGPSNTT 57 (106)
T ss_dssp EEEEEESSCGGGHHHHHHHHHHHHHTTCSCEEECSSCEE
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCCeEeCCCccE
Confidence 46666555 6778888899999999998765444443
No 261
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=29.41 E-value=1.1e+02 Score=22.95 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=26.2
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
+++++.|.....++-+++.|.+.|.++.|+-+
T Consensus 83 lVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~ 114 (265)
T 2o8n_A 83 LVICGPGNNGGDGLVCARHLKLFGYQPTIYYP 114 (265)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCcEEEEEe
Confidence 34456778888999999999999999999744
No 262
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=29.18 E-value=1.6e+02 Score=22.19 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=43.8
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH----HhC-CCeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS----VMK-TNYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~----~~~-~~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+. ++. .-.|++..--...| .+..+..
T Consensus 72 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 151 (293)
T 1f6k_A 72 DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQF 151 (293)
T ss_dssp TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHH
Confidence 44456677776 55667776666666687776666666655565544332 222 13566665433333 2455555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 152 ~~La~ 156 (293)
T 1f6k_A 152 GELYK 156 (293)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 55544
No 263
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=29.17 E-value=56 Score=23.15 Aligned_cols=31 Identities=19% Similarity=0.225 Sum_probs=21.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
..+++||+.|.|....- ..|.+.|.++.+++
T Consensus 19 ~~~I~iiG~G~mG~~la---~~l~~~g~~V~~~~ 49 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIG---HNFEIAGHEVTYYG 49 (209)
T ss_dssp -CEEEEECCSHHHHHHH---HHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHH---HHHHHCCCEEEEEc
Confidence 56899999998876643 34555677777664
No 264
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=29.12 E-value=90 Score=19.64 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=28.9
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEE----eccccCCCHHHHHHHHh
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVIN----LRSLRPLDIETITKSVM 126 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~----~~~l~Pld~~~l~~~~~ 126 (158)
|..-..+.+|++.|.++|+ +.... =.++.+++.+.+.++..
T Consensus 54 gVSr~tVr~al~~L~~~Gl-I~~~~gG~~G~~V~~~~~~~~~~~~~ 98 (102)
T 2b0l_A 54 GITRSVIVNALRKLESAGV-IESRSLGMKGTYIKVLNNKFLIELEN 98 (102)
T ss_dssp TCCHHHHHHHHHHHHHTTS-EEEEECSSSCEEEEECCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCC-EEEEeCCCCcEEEecCCHHHHHHHHH
Confidence 4456678889999999987 33332 23678888888877654
No 265
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=28.96 E-value=56 Score=25.93 Aligned_cols=51 Identities=16% Similarity=0.141 Sum_probs=26.4
Q ss_pred HHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCC-cCCCChH--HHHHHHHHc
Q psy7291 98 LAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGG-WPQCGIG--SEISARIME 153 (158)
Q Consensus 98 L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~-~~~GG~g--~~i~~~l~~ 153 (158)
++..|+.+..++. .|.+.+.+.++..-++|++|.- ++.|-+- .+|++...+
T Consensus 142 l~~~G~~v~~v~~-----~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~ 195 (415)
T 2fq6_A 142 LSKLGVTTSWFDP-----LIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRS 195 (415)
T ss_dssp GGGGTCEEEEECT-----TCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred HHHcCcEEEEECC-----CCHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHh
Confidence 3444666555543 2555566666544456677652 3333322 456666555
No 266
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=28.81 E-value=65 Score=23.25 Aligned_cols=31 Identities=26% Similarity=0.202 Sum_probs=23.2
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
.+++||+-|...- .++..|.+.|.++.+++-
T Consensus 3 ~~vvIIG~G~aGl---~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYAGL---SAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEEECCSHHHH---HHHHHHHHTTCCEEEEEC
T ss_pred CCEEEECCCHHHH---HHHHHHHhCCCCEEEEeC
Confidence 3799998887543 345667778999999983
No 267
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=28.79 E-value=51 Score=23.28 Aligned_cols=33 Identities=12% Similarity=-0.031 Sum_probs=25.6
Q ss_pred CcEEEEEechhH-HHHHHHHHHHHhCCCcEEEEE
Q psy7291 77 KDITIVGHSKAV-ETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 77 ~~~~ii~~G~~~-~~a~ea~~~L~~~gi~~~vi~ 109 (158)
+++++.-+|+.. ..+.+.++.|++.|.++.++-
T Consensus 6 k~IllgvTGs~aa~k~~~ll~~L~~~g~~V~vv~ 39 (175)
T 3qjg_A 6 ENVLICLCGSVNSINISHYIIELKSKFDEVNVIA 39 (175)
T ss_dssp CEEEEEECSSGGGGGHHHHHHHHTTTCSEEEEEE
T ss_pred CEEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 568887778644 557788889998899998883
No 268
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=28.77 E-value=51 Score=23.37 Aligned_cols=31 Identities=10% Similarity=0.018 Sum_probs=24.4
Q ss_pred cEEEEEechh-HHHHHHHHHHHHhCCCcEEEE
Q psy7291 78 DITIVGHSKA-VETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 78 ~~~ii~~G~~-~~~a~ea~~~L~~~gi~~~vi 108 (158)
++++.-+|+. +..+.+.++.|++.|.++.++
T Consensus 4 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv 35 (181)
T 1g63_A 4 KLLICATASINVININHYIVELKQHFDEVNIL 35 (181)
T ss_dssp CEEEEECSCGGGGGHHHHHHHHTTTSSCEEEE
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 5777777764 356778889998889999888
No 269
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=28.76 E-value=38 Score=26.31 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=26.3
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|..+.||++|.+...+ ++.|+..|.++.+++..
T Consensus 143 l~g~tvGIIG~G~IG~~v---A~~l~~~G~~V~~~d~~ 177 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAM---ADRLQGWGATLQYHEAK 177 (330)
T ss_dssp STTCEEEEECCSHHHHHH---HHHTTTSCCEEEEECSS
T ss_pred cCCCEEEEEeeCHHHHHH---HHHHHHCCCEEEEECCC
Confidence 457899999999998765 44566668877777654
No 270
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=28.67 E-value=81 Score=24.22 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=26.1
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
.|++++||+-|.++..- ++..|...|-.+++.+-++
T Consensus 158 ~gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRP--MSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHTTTCEEEEECSSC
T ss_pred CCCEEEEECCChHHHHH--HHHHHHHCCCeEEEEeCCc
Confidence 48899999999776544 3556777788888876444
No 271
>3a9l_A Poly-gamma-glutamate hydrolase; zinc ION binding, open alpha/beta mixed core structure; 1.90A {Bacillus phage PHINIT1}
Probab=28.43 E-value=82 Score=23.20 Aligned_cols=45 Identities=13% Similarity=0.042 Sum_probs=34.1
Q ss_pred cCCCHHHHHHHHhCCCeEEEEe-------CCcCCCCh----HHHHHHHHHcCCCCC
Q psy7291 114 RPLDIETITKSVMKTNYLISVE-------GGWPQCGI----GSEISARIMEIPYSA 158 (158)
Q Consensus 114 ~Pld~~~l~~~~~~~~~vvvvE-------e~~~~GG~----g~~i~~~l~~~~~~~ 158 (158)
..||+..+.++++++..+|.+- ++...||. ...|...|.+.|+++
T Consensus 82 t~fDeP~a~~lv~~~~~~vsiHG~~~~~~~~v~vGG~d~~l~~~I~~~L~~~Gf~v 137 (216)
T 3a9l_A 82 THFDEPMAVCMLSKHTDAVSFHGYKDDYNKNTLVGGLNTELRNLIVSKLNSKGIAA 137 (216)
T ss_dssp GGCCCHHHHHHHHTCSEEEEEEEECCSSCCCEEEESSCHHHHHHHHHHHHHTTCCC
T ss_pred CCCChHHHHHHHhhCCEEEEeeCCCCCCCcEEEECCCCHHHHHHHHHHHHhCCeee
Confidence 5689888899999998888873 33556774 567778888888754
No 272
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=28.42 E-value=53 Score=24.97 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=23.1
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|..... ++-.|.+.|.++.|++-.
T Consensus 18 ~dvvIIGgG~~Gl~---~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSA---IAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHH---HHHHHHhCCCcEEEEeCC
Confidence 58999998865432 334566679999999865
No 273
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=28.40 E-value=58 Score=24.20 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=23.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|...-. ++-.|.+.|+++.|+.-.
T Consensus 3 ~dV~IIGaG~~Gl~---~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 3 VPIAIIGTGIAGLS---AAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHH---HHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCcHHHHH---HHHHHHHCCCcEEEEECC
Confidence 47999998875433 344677789999999754
No 274
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=28.38 E-value=34 Score=24.60 Aligned_cols=33 Identities=9% Similarity=-0.116 Sum_probs=26.3
Q ss_pred CCcEEEEEechhH-HHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSKAV-ETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~~~-~~a~ea~~~L~~~gi~~~vi 108 (158)
++++++.-+|+.. ..+.+.++.|++.|.++.++
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv 41 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVV 41 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEE
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 5678888888753 45778888998889988887
No 275
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=28.36 E-value=1.7e+02 Score=21.14 Aligned_cols=49 Identities=22% Similarity=0.226 Sum_probs=34.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK 127 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~ 127 (158)
+..++||+.|.. +.+.+..|.+.|.++.++....-.+.+.+.+.+++++
T Consensus 147 ~~~v~viG~g~~---~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 195 (315)
T 3r9u_A 147 NKEVAVLGGGDT---ALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKN 195 (315)
T ss_dssp TSEEEEECCBHH---HHHHHHHHHTTSSEEEEECSSSSCBSCHHHHHHHHHC
T ss_pred cCEEEEECCCHH---HHHHHHHHHhhCCEEEEEEeCCCCCCCHHHHHHHHhc
Confidence 678899977754 4556677878888999987665445666666666643
No 276
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=28.36 E-value=48 Score=24.37 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=22.7
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
.|++||+.|+..-. |+..|.+.|.++.+++-
T Consensus 5 yDvvIIG~GpAGl~---AA~~la~~g~~v~liE~ 35 (314)
T 4a5l_A 5 HDVVIIGSGPAAHT---AAIYLGRSSLKPVMYEG 35 (314)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCCEEECC
T ss_pred CcEEEECCCHHHHH---HHHHHHHCCCCEEEEec
Confidence 58999999975432 34456667999999874
No 277
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=28.33 E-value=1.4e+02 Score=23.03 Aligned_cols=78 Identities=21% Similarity=0.165 Sum_probs=48.1
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|++..--...| .+..+..
T Consensus 102 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~ 181 (332)
T 2r8w_A 102 GRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELL 181 (332)
T ss_dssp TSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHH
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHH
Confidence 44557778886 5677777777777778887777777766667765543 33322 3566665433333 3555555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 182 ~~La~ 186 (332)
T 2r8w_A 182 VRLAY 186 (332)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55554
No 278
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=28.22 E-value=1.1e+02 Score=23.21 Aligned_cols=78 Identities=19% Similarity=0.174 Sum_probs=47.0
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH----HhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS----VMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~----~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.+..++.+.+.+.+. ++.. -.|+...--...| .+..+..
T Consensus 72 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 151 (300)
T 3eb2_A 72 RRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVI 151 (300)
T ss_dssp TSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHH
Confidence 33346677775 66777777777777788877777666666666654333 3322 4677776544343 3455555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 152 ~~La~ 156 (300)
T 3eb2_A 152 ARLAE 156 (300)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55554
No 279
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=28.11 E-value=2.2e+02 Score=22.33 Aligned_cols=53 Identities=8% Similarity=0.073 Sum_probs=30.8
Q ss_pred HhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCC-cCCCChH--HHHHHHHHcCCC
Q psy7291 99 AGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGG-WPQCGIG--SEISARIMEIPY 156 (158)
Q Consensus 99 ~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~-~~~GG~g--~~i~~~l~~~~~ 156 (158)
+..|..+..++.. |.+.+.+.++...++|++|.- .+.|-.- ..|++...++|+
T Consensus 142 ~~~g~~~~~v~~~-----d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~ 197 (414)
T 3ndn_A 142 PRWGVQTVFVDGD-----DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGA 197 (414)
T ss_dssp HHTTCEEEEECTT-----CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred HHcCcEEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCC
Confidence 3346555444332 667777777655567777763 3444332 566776666654
No 280
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=28.11 E-value=67 Score=23.47 Aligned_cols=32 Identities=31% Similarity=0.174 Sum_probs=23.8
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|...-. ++..|.+.|.++.|++-.
T Consensus 16 ~~vvIIG~G~aGl~---aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAAYG---AALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHHHH---HHHHHHHCCCcEEEEecc
Confidence 47999999875433 455667779999999863
No 281
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=28.10 E-value=71 Score=24.61 Aligned_cols=33 Identities=9% Similarity=0.135 Sum_probs=26.6
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+++++.|....-++-+++.|...|.++.|+-+.
T Consensus 136 lVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 136 ALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 344567778889999999999999999987544
No 282
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=27.90 E-value=1.3e+02 Score=23.37 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=29.0
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc-ccC--CCHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS-LRP--LDIE 119 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~-l~P--ld~~ 119 (158)
+++++||+.|.. ++|.+..|.+.|.+++++...- +-| +|.+
T Consensus 145 ~~~vvViGgG~~---g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 188 (408)
T 2gqw_A 145 QSRLLIVGGGVI---GLELAATARTAGVHVSLVETQPRLMSRAAPAT 188 (408)
T ss_dssp TCEEEEECCSHH---HHHHHHHHHHTTCEEEEEESSSSSSTTTSCHH
T ss_pred CCeEEEECCCHH---HHHHHHHHHhCCCEEEEEEeCCcccccccCHH
Confidence 678999988764 4556677888899999997642 333 5554
No 283
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=27.89 E-value=65 Score=24.76 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=23.0
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|..-.. ++-.|.+.|.++.|++-.
T Consensus 5 ~DVvIIGaG~~Gl~---~A~~La~~G~~V~vlE~~ 36 (397)
T 2oln_A 5 YDVVVVGGGPVGLA---TAWQVAERGHRVLVLERH 36 (397)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHH---HHHHHHHCCCeEEEEeCC
Confidence 48999998865433 233566679999999864
No 284
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=27.86 E-value=2.3e+02 Score=22.61 Aligned_cols=74 Identities=11% Similarity=0.065 Sum_probs=47.8
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCC-cEEEEEeccccCCCHH-----HHHHHHhCC-CeEEEEeCCcCCCChHHHHH
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGI-DAEVINLRSLRPLDIE-----TITKSVMKT-NYLISVEGGWPQCGIGSEIS 148 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi-~~~vi~~~~l~Pld~~-----~l~~~~~~~-~~vvvvEe~~~~GG~g~~i~ 148 (158)
++=+|+++|. +.....+|++.+...|- ++.++...+-+|-+.+ .+..+-+.. ...|..-+|.. |-..-.++
T Consensus 158 gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~-G~~~~~~A 236 (385)
T 1vli_A 158 NRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSE-HPTEAPCA 236 (385)
T ss_dssp CSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCS-SSSHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCC-CchHHHHH
Confidence 4567899995 56888899999988885 7888876666775443 343333344 34556777873 31555555
Q ss_pred HHH
Q psy7291 149 ARI 151 (158)
Q Consensus 149 ~~l 151 (158)
+..
T Consensus 237 AvA 239 (385)
T 1vli_A 237 AVR 239 (385)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 285
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.68 E-value=1.3e+02 Score=22.60 Aligned_cols=78 Identities=13% Similarity=0.050 Sum_probs=39.7
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHH----hC-CCeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSV----MK-TNYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~----~~-~~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+.. +. .-.|+...--...| .+..+..
T Consensus 70 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~ 149 (292)
T 3daq_A 70 KRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETV 149 (292)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHH
Confidence 34445666764 556666666666666777666666555555555433322 21 23455554322222 2344444
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 150 ~~La~ 154 (292)
T 3daq_A 150 EILSQ 154 (292)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 44444
No 286
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=27.61 E-value=91 Score=17.81 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHHh-----CCCcEEEEEeccccCCCHHHHHHHHh---CCCeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 86 KAVETALDAAKILAG-----QGIDAEVINLRSLRPLDIETITKSVM---KTNYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 86 ~~~~~a~ea~~~L~~-----~gi~~~vi~~~~l~Pld~~~l~~~~~---~~~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
+.+..+.++...|++ .++.+..+|+.. .|-..+.+.+... ..-..+++ ++...||+ +.|.+++.
T Consensus 9 ~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~-~~~~~~~l~~~~~~~~~~vP~i~~-~g~~i~~~-~~l~~~~~ 80 (85)
T 1ego_A 9 SGCPYCVRAKDLAEKLSNERDDFQYQYVDIRA-EGITKEDLQQKAGKPVETVPQIFV-DQQHIGGY-TDFAAWVK 80 (85)
T ss_dssp TTSTHHHHHHHHHHHHHHHHSSCEEEEECHHH-HTCCSHHHHHHTCCCSCCSCEEEE-TTEEEESS-HHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCceEEEEeccc-ChHHHHHHHHHhCCCCceeCeEEE-CCEEEECH-HHHHHHHH
Confidence 334444444444443 577777777754 2322234555443 12234455 45557886 56666554
No 287
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=27.37 E-value=70 Score=23.62 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=22.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
-|++||+.|+.--. |+-.|.+.|.++.|++-
T Consensus 7 yDVvIIGaGpAGls---AA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 7 IDCAVIGAGPAGLN---ASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEEEC
T ss_pred cCEEEECCCHHHHH---HHHHHHHCCCCEEEEeC
Confidence 58999999975432 33445567999999974
No 288
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=27.27 E-value=1.3e+02 Score=23.09 Aligned_cols=76 Identities=16% Similarity=0.093 Sum_probs=42.0
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH----HhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS----VMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~----~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+. ++.. -.|+...--...| .+..++.
T Consensus 92 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 171 (315)
T 3na8_A 92 HRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELI 171 (315)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHH
Confidence 44456677774 56677777777777788777776666555566544333 2222 3566665332222 2344444
Q ss_pred HHH
Q psy7291 149 ARI 151 (158)
Q Consensus 149 ~~l 151 (158)
..|
T Consensus 172 ~~L 174 (315)
T 3na8_A 172 LRI 174 (315)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 289
>2ibo_A Hypothetical protein SP2199; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Streptococcus pneumoniae TIGR4} SCOP: d.58.48.1
Probab=27.24 E-value=1e+02 Score=19.72 Aligned_cols=35 Identities=9% Similarity=0.108 Sum_probs=24.3
Q ss_pred cEEEEEec---hhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 78 DITIVGHS---KAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 78 ~~~ii~~G---~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
++.++=.| +....+.++.+.|++.|++..+=-+.+
T Consensus 6 e~sv~Plg~~~svs~~Va~~i~vl~~sGl~y~~~pmgT 43 (104)
T 2ibo_A 6 ALQVLPLVQGIDRIAVIDQVIAYLQTQEVTMVVTPFET 43 (104)
T ss_dssp EEEEEECSCSHHHHHHHHHHHHHHHHSSSEEEECSSCE
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHcCCCeEecCCcc
Confidence 35555555 677888889999999998875543333
No 290
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=27.17 E-value=93 Score=23.68 Aligned_cols=57 Identities=12% Similarity=0.202 Sum_probs=34.4
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecccc--CCCHHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLR--PLDIETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~--Pld~~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|+..|.++.+++...-. -.....+.++++..+.|++
T Consensus 122 l~g~~vgIIG~G~IG~~~---A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l 180 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGTRV---GKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVC 180 (303)
T ss_dssp CTTCEEEEESCSTHHHHH---HHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEE
T ss_pred CCCCEEEEEccCHHHHHH---HHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEE
Confidence 447889999999998875 44555668887777643210 0011234566666654443
No 291
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=27.14 E-value=79 Score=24.70 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=26.2
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|..+.||++|.+...+ ++.|...|.++.+++..
T Consensus 166 l~g~tvGIIG~G~IG~~v---A~~l~~~G~~V~~~d~~ 200 (347)
T 1mx3_A 166 IRGETLGIIGLGRVGQAV---ALRAKAFGFNVLFYDPY 200 (347)
T ss_dssp CTTCEEEEECCSHHHHHH---HHHHHTTTCEEEEECTT
T ss_pred CCCCEEEEEeECHHHHHH---HHHHHHCCCEEEEECCC
Confidence 447889999999998775 44566668888777643
No 292
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=26.98 E-value=58 Score=24.80 Aligned_cols=33 Identities=30% Similarity=0.387 Sum_probs=23.8
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
.|++||+-|..... ++-.|.+.|+++.|++-..
T Consensus 5 ~dVvIvG~G~aGl~---~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGST---AARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCCEEEEeCCC
Confidence 47999998875433 2345667799999997654
No 293
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=26.96 E-value=87 Score=23.83 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=35.6
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC---H-HHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD---I-ETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld---~-~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+- +.|+..|.++.+++... .+.+ . ..+.++++..+.|++
T Consensus 120 l~g~tvGIIGlG~IG~~vA---~~l~~~G~~V~~~dr~~-~~~~~~~~~~~l~ell~~aDiV~l 179 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVA---HLAKAFGMRVIAYTRSS-VDQNVDVISESPADLFRQSDFVLI 179 (290)
T ss_dssp CTTCEEEEECCSHHHHHHH---HHHHHHTCEEEEECSSC-CCTTCSEECSSHHHHHHHCSEEEE
T ss_pred eecchheeeccCchhHHHH---HHHHhhCcEEEEEeccc-cccccccccCChHHHhhccCeEEE
Confidence 4478999999999987754 34555588888887543 2211 1 245667766654444
No 294
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=26.92 E-value=1.6e+02 Score=22.69 Aligned_cols=72 Identities=11% Similarity=0.176 Sum_probs=47.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChHHHHHHHHHc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIGSEISARIME 153 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g~~i~~~l~~ 153 (158)
+.|++|-+.|...+. .+++.+-+.| +.++|+....+.. ..+.+.+++.+..++.+-+. .-|+...++..+.+
T Consensus 77 ~~DvVi~~~p~~~~~--~v~~~~~~~g--~~yvD~s~~~~~~-~~l~~~a~~~g~~~i~~~G~-~PG~~~~~a~~~~~ 148 (365)
T 3abi_A 77 EFELVIGALPGFLGF--KSIKAAIKSK--VDMVDVSFMPENP-LELRDEAEKAQVTIVFDAGF-APGLSNILMGRIFQ 148 (365)
T ss_dssp TCSEEEECCCGGGHH--HHHHHHHHHT--CEEEECCCCSSCG-GGGHHHHHHTTCEEECCCBT-TTBHHHHHHHHHHH
T ss_pred CCCEEEEecCCcccc--hHHHHHHhcC--cceEeeeccchhh-hhhhhhhccCCceeeecCCC-CCchHHHHHHHHHH
Confidence 679999999876543 2333333334 5689988766643 34677777777777777665 56888777766654
No 295
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=26.86 E-value=58 Score=27.01 Aligned_cols=58 Identities=17% Similarity=0.279 Sum_probs=38.1
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC-------CCHHHHHHHHhCCCeEEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP-------LDIETITKSVMKTNYLISV 134 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-------ld~~~l~~~~~~~~~vvvv 134 (158)
..|+.+.||++|.+...+ ++.|+..|.++.+++....+. +....+.++++..+-|++.
T Consensus 275 L~GktVgIIG~G~IG~~v---A~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~ 339 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGC---AQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTA 339 (494)
T ss_dssp CTTCEEEEECCSHHHHHH---HHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEEC
T ss_pred cCCCEEEEEccCHHHHHH---HHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEEC
Confidence 347899999999987764 455666688888887654221 1111366777777766654
No 296
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=26.82 E-value=2e+02 Score=22.81 Aligned_cols=76 Identities=12% Similarity=0.189 Sum_probs=40.2
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCC------eEEEEe-CCcCCCChH--HHHH
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTN------YLISVE-GGWPQCGIG--SEIS 148 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~------~vvvvE-e~~~~GG~g--~~i~ 148 (158)
+..|++....-....++++.+ |+.+..+.+..=.-+|.+.|.+.+.... .++++- -++..|.+- .+|+
T Consensus 182 ~~~v~~s~~~h~s~~~~~~~~---G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~ 258 (486)
T 1js3_A 182 KLVAYASDQAHSSVERAGLIG---GVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVG 258 (486)
T ss_dssp HEEEEEETTCCHHHHHHHHHH---TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHhC---CCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHH
Confidence 444444433333344555544 6665555443223467777877775321 144443 345566653 5677
Q ss_pred HHHHcCCC
Q psy7291 149 ARIMEIPY 156 (158)
Q Consensus 149 ~~l~~~~~ 156 (158)
+...++|+
T Consensus 259 ~la~~~~~ 266 (486)
T 1js3_A 259 PICHEEDI 266 (486)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 77776654
No 297
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=26.72 E-value=2.3e+02 Score=22.24 Aligned_cols=73 Identities=11% Similarity=0.130 Sum_probs=46.7
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHH-----HHHHHHhCC-CeEEEEeCCcCCCChHHHHHH
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIE-----TITKSVMKT-NYLISVEGGWPQCGIGSEISA 149 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~-----~l~~~~~~~-~~vvvvEe~~~~GG~g~~i~~ 149 (158)
++=+|+++|. +..+..+|++.+...|-++.+.+...-+|-+.+ .+..+-+.+ ...|..-+|.. |..-.+++
T Consensus 148 gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~--G~~~~~AA 225 (349)
T 2wqp_A 148 GKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTL--DNYACLGA 225 (349)
T ss_dssp CSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSS--SSHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCC--cHHHHHHH
Confidence 4567889995 568888899999887777777765555665433 344333344 34556777873 46655555
Q ss_pred HH
Q psy7291 150 RI 151 (158)
Q Consensus 150 ~l 151 (158)
..
T Consensus 226 vA 227 (349)
T 2wqp_A 226 VA 227 (349)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 298
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=26.70 E-value=2.1e+02 Score=21.64 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=45.1
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH----HhCC-CeEEEEeCCcCCC-ChHHHHHH
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS----VMKT-NYLISVEGGWPQC-GIGSEISA 149 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~----~~~~-~~vvvvEe~~~~G-G~g~~i~~ 149 (158)
+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+. ++.. -.|+...--...| .+..+...
T Consensus 77 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~ 156 (301)
T 3m5v_A 77 KVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTII 156 (301)
T ss_dssp SCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHH
Confidence 4567778885 66777777777888888877777666655566544333 3322 3566665433222 24444444
Q ss_pred HHHc
Q psy7291 150 RIME 153 (158)
Q Consensus 150 ~l~~ 153 (158)
.|++
T Consensus 157 ~La~ 160 (301)
T 3m5v_A 157 KLFR 160 (301)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 299
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=26.68 E-value=2e+02 Score=21.33 Aligned_cols=72 Identities=14% Similarity=0.126 Sum_probs=31.8
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCc-EEEEE-eccc-cCCCHHH----HHHHHhCCC-eEEEEeCCcCC---CChHHH
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGID-AEVIN-LRSL-RPLDIET----ITKSVMKTN-YLISVEGGWPQ---CGIGSE 146 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~-~~vi~-~~~l-~Pld~~~----l~~~~~~~~-~vvvvEe~~~~---GG~g~~ 146 (158)
+++.++.|+.. +.++++.+-..|.+ +-+++ -+.+ ..++... |.+++++.+ .+|++=..... +.+|..
T Consensus 57 ~V~av~~G~~~--a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~ 134 (252)
T 1efp_B 57 EIIAVSIGVKQ--AAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQM 134 (252)
T ss_dssp EEEEEEEESGG--GHHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHH
T ss_pred eEEEEEeCChh--HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHH
Confidence 78888888631 12222222222544 33444 3333 3344332 344443321 23333333322 446677
Q ss_pred HHHHH
Q psy7291 147 ISARI 151 (158)
Q Consensus 147 i~~~l 151 (158)
+++.|
T Consensus 135 lA~~L 139 (252)
T 1efp_B 135 LAAIL 139 (252)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77665
No 300
>1jw3_A Conserved hypothetical protein MTH1598; structural genomics, protein structure initiative, OCSP, NESG; NMR {Methanothermobacterthermautotrophicus} SCOP: d.208.1.1
Probab=26.63 E-value=49 Score=22.46 Aligned_cols=20 Identities=15% Similarity=0.184 Sum_probs=17.1
Q ss_pred CCcEEEEEechhHHHHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAA 95 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~ 95 (158)
.+|+.|-+||.....+.+.+
T Consensus 10 TADv~i~a~G~tlee~F~~a 29 (140)
T 1jw3_A 10 TADAGFWAYGHDLEEVFENA 29 (140)
T ss_dssp SSEEEEEEECSSSHHHHHHH
T ss_pred CccEEEEEEECCHHHHHHHH
Confidence 68999999999998887643
No 301
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=26.59 E-value=82 Score=22.81 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=24.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+.++.||+.|.|.... +..|.+.|.++.+++..
T Consensus 19 ~~kIgiIG~G~mG~al---A~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTM---AGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHHHH---HHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHHHHH---HHHHHHCCCEEEEEeCC
Confidence 5789999999998764 34566678888888643
No 302
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=26.57 E-value=58 Score=21.67 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=20.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
+..+++.+.+.....+..|+..|+..|.++.+++
T Consensus 72 ~~~ivvyC~~g~~~rs~~aa~~L~~~G~~v~~l~ 105 (144)
T 3nhv_A 72 EKVIITYCWGPACNGATKAAAKFAQLGFRVKELI 105 (144)
T ss_dssp TSEEEEECSCTTCCHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEEECCCCccHHHHHHHHHHHCCCeEEEeC
Confidence 3455555544321355667788888898755554
No 303
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=26.57 E-value=83 Score=24.87 Aligned_cols=57 Identities=18% Similarity=0.370 Sum_probs=36.1
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC-------CCHHHHHHHHhCCCeEEE
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP-------LDIETITKSVMKTNYLIS 133 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-------ld~~~l~~~~~~~~~vvv 133 (158)
...|+.+.||++|.+...+ ++.|+.-|.++.+++.. .++ +....+.++++..+.|++
T Consensus 173 ~l~gktvGIIGlG~IG~~v---A~~l~~fG~~V~~~d~~-~~~~~~~~~g~~~~~l~ell~~aDvV~l 236 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKAL---RRVLSGFRARIRVFDPW-LPRSMLEENGVEPASLEDVLTKSDFIFV 236 (365)
T ss_dssp CSSSSEEEEECCSHHHHHH---HHHHTTSCCEEEEECSS-SCHHHHHHTTCEECCHHHHHHSCSEEEE
T ss_pred ccCCCEEEEecCCcccHHH---HHhhhhCCCEEEEECCC-CCHHHHhhcCeeeCCHHHHHhcCCEEEE
Confidence 3457899999999988765 44566668887777753 121 001135677777665443
No 304
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=26.56 E-value=1.3e+02 Score=21.12 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=39.0
Q ss_pred EEEEEechhHHHHHHHH----HHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChH---HHHHHHH
Q psy7291 79 ITIVGHSKAVETALDAA----KILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIG---SEISARI 151 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~----~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g---~~i~~~l 151 (158)
-++|.|||+.....+.+ +.|.+.|+++.++++....+ -+..++.|+++=-.+ .|..- ..+.+.|
T Consensus 23 kv~IvY~S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~~~~~--------~l~~~d~vi~g~~Ty-~G~~p~~~~~fl~~L 93 (191)
T 1bvy_F 23 PLLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDSHAG--------NLPREGAVLIVTASY-NGHPPDNAKQFVDWL 93 (191)
T ss_dssp CEEEEEECSSSHHHHHHHHHHHHHHTTTCCCEEEEGGGSTT--------CCCSSSEEEEEECCB-TTBCCTTTHHHHHHH
T ss_pred eEEEEEECCChHHHHHHHHHHHHHHhCCCceEEeeHHHhhh--------hhhhCCeEEEEEeec-CCCcCHHHHHHHHHH
Confidence 34566777776665554 44556688888888776311 134566777776666 66653 3444444
Q ss_pred H
Q psy7291 152 M 152 (158)
Q Consensus 152 ~ 152 (158)
.
T Consensus 94 ~ 94 (191)
T 1bvy_F 94 D 94 (191)
T ss_dssp H
T ss_pred H
Confidence 3
No 305
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=26.45 E-value=54 Score=24.23 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=24.1
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
..+++||+-|...- .++..|.+.|+++.|++-
T Consensus 22 ~~~vvIIG~G~aGl---~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPAAH---TAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEEECCSHHHH---HHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHHH---HHHHHHHHCCCCEEEEec
Confidence 45899999987543 345567777999999986
No 306
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=26.39 E-value=1e+02 Score=23.40 Aligned_cols=78 Identities=18% Similarity=0.052 Sum_probs=43.3
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 147 (297)
T 2rfg_A 68 GRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETM 147 (297)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHH
Confidence 33346677776 5566776666666668777666666665556655433 23322 3566665433333 2444554
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 148 ~~La~ 152 (297)
T 2rfg_A 148 ARLAA 152 (297)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 45544
No 307
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=26.20 E-value=1.6e+02 Score=21.85 Aligned_cols=58 Identities=16% Similarity=0.243 Sum_probs=27.6
Q ss_pred HHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 98 LAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 98 L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
++..|.++..+.+..=..+|.+.+.+.++...++++++. +++.|..- .+|.+...++|
T Consensus 109 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~ 169 (384)
T 1eg5_A 109 LSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKN 169 (384)
T ss_dssp HHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHC
T ss_pred HHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcC
Confidence 334455544443322123566666666654335555654 23334332 45555555544
No 308
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=26.17 E-value=52 Score=27.02 Aligned_cols=28 Identities=7% Similarity=-0.039 Sum_probs=24.5
Q ss_pred CcccCCHHHHHHHHHHHHhC--CCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRD--PDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~--~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|.+. +.|+.+|-
T Consensus 46 vv~P~s~eev~~~v~~a~~~~~~~~v~~~G 75 (481)
T 4feh_A 46 VLRTPDAEMIVKAVARVAESGGGRGAIARG 75 (481)
T ss_dssp EEECSCHHHHHHHHHHHHTTTCTTCEEEEC
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCceEEEEe
Confidence 46899999999999999887 68999874
No 309
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=26.10 E-value=39 Score=28.31 Aligned_cols=28 Identities=21% Similarity=0.086 Sum_probs=25.1
Q ss_pred CcccCCHHHHHHHHHHHHhCCCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIRDPDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~~~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|.+++.|+.+|-
T Consensus 39 vv~P~s~~ev~~~v~~a~~~~~~v~~~G 66 (561)
T 2i0k_A 39 VCSPKTPQDVVRLANWAHEHDYKIRPRG 66 (561)
T ss_dssp EECCSSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred EEecCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 4689999999999999998889999974
No 310
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=26.03 E-value=2.1e+02 Score=21.46 Aligned_cols=57 Identities=11% Similarity=0.142 Sum_probs=28.9
Q ss_pred HhCCCcEEEEEeccccCCCHHHHHHHHhC-CCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 99 AGQGIDAEVINLRSLRPLDIETITKSVMK-TNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 99 ~~~gi~~~vi~~~~l~Pld~~~l~~~~~~-~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
+..|..+..+.+..-..+|.+.+.+.++. ..+++++.. +++.|-.- ..|.+.+.++|
T Consensus 114 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~ 174 (393)
T 2huf_A 114 TRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHN 174 (393)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTT
T ss_pred HHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcC
Confidence 34466655555433234666777666654 334555554 33333322 35555555554
No 311
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=25.94 E-value=63 Score=24.58 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=22.7
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|..... ++-.|.+.|.++.|++-.
T Consensus 4 ~dvvIIGaG~~Gl~---~A~~La~~G~~V~vie~~ 35 (389)
T 2gf3_A 4 FDVIVVGAGSMGMA---AGYQLAKQGVKTLLVDAF 35 (389)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHH---HHHHHHhCCCeEEEEeCC
Confidence 47999998865432 234566679999999754
No 312
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=25.89 E-value=1.3e+02 Score=23.75 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=23.9
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
.|..++|++.|.+...+ ++.|.+.|.++-+.|
T Consensus 172 ~GktV~V~G~G~VG~~~---A~~L~~~GakVvv~D 203 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKAL---CKKLNTEGAKLVVTD 203 (364)
T ss_dssp TTCEEEEECCSHHHHHH---HHHHHHTTCEEEEEC
T ss_pred CcCEEEEECchHHHHHH---HHHHHHCCCEEEEEc
Confidence 47889999999986654 556677788766655
No 313
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=25.87 E-value=66 Score=24.46 Aligned_cols=34 Identities=29% Similarity=0.333 Sum_probs=24.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
..|++||+-|..-.. ++-.|.+.|.++.|++-..
T Consensus 5 ~~dVvIIGgGi~Gl~---~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVT---IAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHH---HHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHH---HHHHHHHCCCeEEEEeCCC
Confidence 468999998865433 3445666799999998653
No 314
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=25.73 E-value=31 Score=22.69 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=20.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
+..++||+.|.+.....+ .|...|.++.+++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~---~l~~~g~~v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAP---YFSYPQYKVTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGG---GCCTTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHH---HHHhCCCEEEEEcC
Confidence 567889998888765433 34445766665553
No 315
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=25.67 E-value=65 Score=23.44 Aligned_cols=32 Identities=0% Similarity=0.017 Sum_probs=25.7
Q ss_pred CCcEEEEEechhH-HHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSKAV-ETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~~~-~~a~ea~~~L~~~gi~~~vi 108 (158)
+.+++|.-+|+.. ..+.+.++.|++.| ++.+|
T Consensus 19 ~k~IllgvTGsiaa~k~~~ll~~L~~~g-~V~vv 51 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIKFGNLCHCFTEWA-EVRAV 51 (209)
T ss_dssp CCEEEEEECSSGGGGGHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEEeCcHHHHHHHHHHHHHhcCC-CEEEE
Confidence 5678888888854 45778889999888 88887
No 316
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=25.67 E-value=61 Score=25.05 Aligned_cols=33 Identities=18% Similarity=0.404 Sum_probs=24.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
.|++||+-|..... ++-.|.+.|+++.|+.-..
T Consensus 6 ~dVvIIGgG~aGl~---~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTV---AASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHH---HHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHH---HHHHHHhCCCCEEEEeCCC
Confidence 58999998875443 3446777899999997653
No 317
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=25.45 E-value=80 Score=23.33 Aligned_cols=32 Identities=28% Similarity=0.322 Sum_probs=23.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|...-. ++..|.+.|.++.+++-.
T Consensus 17 ~dvvIIG~G~aGl~---aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFS---AAVYAARSGFSVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEEESS
T ss_pred CcEEEECcCHHHHH---HHHHHHhCCCcEEEEeCC
Confidence 57999999975433 345566779999999853
No 318
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=25.37 E-value=72 Score=24.67 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=24.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.-|++||+-|...-. ++-.|.+.|+++.|++-.
T Consensus 23 ~~dV~IVGaG~aGl~---~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLS---AAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp CCEEEEECCSHHHHH---HHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCHHHHH---HHHHHHhCCCCEEEEeCC
Confidence 468999998875443 344567779999999764
No 319
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=25.18 E-value=2.5e+02 Score=22.10 Aligned_cols=78 Identities=13% Similarity=0.008 Sum_probs=50.5
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC---CCeEEEEeCCcCCC-ChHHHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK---TNYLISVEGGWPQC-GIGSEISAR 150 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~---~~~vvvvEe~~~~G-G~g~~i~~~ 150 (158)
|+--+|+++|+ .+..+.+.++..++.|.+.-++-.++..+.+.+.+.+..+. ...|+...--...| .+..+....
T Consensus 127 grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~PiilYNiP~rTg~~ls~e~l~~ 206 (360)
T 4dpp_A 127 GSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVPGRTGQDIPPRAIFK 206 (360)
T ss_dssp TTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSCEEEEECHHHHSCCCCHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCCcccCCCCCHHHHHH
Confidence 44466778885 67888888888888899887777777766677766554432 23677776433333 345555555
Q ss_pred HHc
Q psy7291 151 IME 153 (158)
Q Consensus 151 l~~ 153 (158)
|++
T Consensus 207 La~ 209 (360)
T 4dpp_A 207 LSQ 209 (360)
T ss_dssp HTT
T ss_pred Hhc
Confidence 554
No 320
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=25.10 E-value=1.7e+02 Score=22.65 Aligned_cols=39 Identities=10% Similarity=0.022 Sum_probs=20.1
Q ss_pred CHHHHHHHHhCCCeEEEEeC-CcCCCChH--HHHHHHHHc-CC
Q psy7291 117 DIETITKSVMKTNYLISVEG-GWPQCGIG--SEISARIME-IP 155 (158)
Q Consensus 117 d~~~l~~~~~~~~~vvvvEe-~~~~GG~g--~~i~~~l~~-~~ 155 (158)
|.+.+.+.++...++++++. +++.|-.- ..|++...+ +|
T Consensus 136 d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~ 178 (404)
T 1e5e_A 136 IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEG 178 (404)
T ss_dssp STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTT
T ss_pred CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcC
Confidence 44556666554345666665 34444332 455555555 44
No 321
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=25.09 E-value=1.7e+02 Score=22.35 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=40.9
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHH----HhC-CCeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKS----VMK-TNYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~----~~~-~~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+. ++. .-.|++..--...| .+..+..
T Consensus 90 grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 169 (315)
T 3si9_A 90 KRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETM 169 (315)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHH
Confidence 34446667775 56667776677777777766666665555555543332 222 23466555322222 2344444
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 170 ~~La~ 174 (315)
T 3si9_A 170 RDLCR 174 (315)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44443
No 322
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=24.86 E-value=1.1e+02 Score=20.82 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=28.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
.+.+.+++.|.....|......|..-|+.+.++.
T Consensus 39 a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 72 (187)
T 3sho_A 39 ADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLT 72 (187)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEecCchHHHHHHHHHHHHhcCCCEEEec
Confidence 4689999999999999999888888788776664
No 323
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=24.85 E-value=1.8e+02 Score=21.68 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=22.2
Q ss_pred CCcEEEEE-echhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 76 GKDITIVG-HSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 76 g~~~~ii~-~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
..+++||+ .|.|....- ..|.+.|.++.+++
T Consensus 21 ~~~I~iIGg~G~mG~~la---~~l~~~G~~V~~~~ 52 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFA---RYLRASGYPISILD 52 (298)
T ss_dssp CCCEEEETTTSHHHHHHH---HHHHTTTCCEEEEC
T ss_pred CCEEEEEcCCCHHHHHHH---HHHHhCCCeEEEEE
Confidence 35799999 999887653 34556677777775
No 324
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=24.83 E-value=1.3e+02 Score=19.95 Aligned_cols=73 Identities=12% Similarity=0.248 Sum_probs=41.6
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC--HHHHHHHHhCC--CeEEEEeCCcCCCChHHHHHHHHH
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD--IETITKSVMKT--NYLISVEGGWPQCGIGSEISARIM 152 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld--~~~l~~~~~~~--~~vvvvEe~~~~GG~g~~i~~~l~ 152 (158)
.++|+|.|..+.-..++++.+--.-.++..+++..=...+ .+.+.+.+++. +.|+++=+=. ||--..++..+.
T Consensus 7 ~iiivsHG~~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~~~~~~~i~~~i~~~~~~gvliLtDl~--GGSp~n~a~~~~ 83 (142)
T 3bed_A 7 KLILMSHGRMAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKLAAILKEAGNVPTLVLADLX--GGTPCNVAMMAM 83 (142)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCTTCCCEEEEECTTTHHHHHHHHHHHHHHHHCSCCEEEEESST--TSHHHHHHHHHT
T ss_pred cEEEEcChHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEEECC--CCHHHHHHHHHh
Confidence 5899999999888999998875333456667654211111 12344555432 4455554433 665444444443
No 325
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=24.83 E-value=61 Score=26.14 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=24.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
+.+++||+.|...-. ++..|.+.|.++.|++-.
T Consensus 122 ~~~V~IIGgGpAGl~---aA~~L~~~G~~V~v~e~~ 154 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLA---AAEELRAKGYEVHVYDRY 154 (456)
T ss_dssp CCCEEEECCSHHHHH---HHHHHHHHTCCEEEECSS
T ss_pred CCEEEEECCCHHHHH---HHHHHHHCCCeEEEEecc
Confidence 678999999975433 455566669999999764
No 326
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=24.80 E-value=71 Score=25.42 Aligned_cols=31 Identities=23% Similarity=0.212 Sum_probs=22.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
++++||+-|...- -|+-.|.+.|.+|.|+--
T Consensus 2 k~VvVIGaG~~GL---~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 2 KPTTVIGAGFGGL---ALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCEEEECCHHHHH---HHHHHHHHTTCCEEEECC
T ss_pred CCEEEECCcHHHH---HHHHHHHHCCCcEEEEcc
Confidence 4689998875432 345678888999999843
No 327
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=24.78 E-value=80 Score=23.30 Aligned_cols=33 Identities=9% Similarity=0.093 Sum_probs=18.6
Q ss_pred CCcEEEEEechhHHHHHHHHHH-HHhCCCcEEEE
Q psy7291 76 GKDITIVGHSKAVETALDAAKI-LAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~-L~~~gi~~~vi 108 (158)
..+++.+.+||++..+.+.+.+ +++++.++.+|
T Consensus 18 dg~vIgLGsGST~~~~i~~L~~~~~~~~~~i~~V 51 (225)
T 3l7o_A 18 DGMIVGLGTGSTAYYFVEEVGRRVQEEGLQVIGV 51 (225)
T ss_dssp TTCEEEECCSTTHHHHHHHHHHHHHHHCCCCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHhhhhcCCCEEEE
Confidence 4567777777777766665543 23333444443
No 328
>1ptf_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 1.60A {Enterococcus faecalis} SCOP: d.94.1.1 PDB: 1qfr_A 1fu0_A*
Probab=24.66 E-value=1.3e+02 Score=18.45 Aligned_cols=25 Identities=20% Similarity=0.169 Sum_probs=21.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAG 100 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~ 100 (158)
|..+.|.+.|.....|++++..|-+
T Consensus 58 g~~i~i~~~G~De~~A~~~l~~l~~ 82 (88)
T 1ptf_A 58 GSDVTITVDGADEAEGMAAIVETLQ 82 (88)
T ss_dssp TCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 7889999999999999998887654
No 329
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=24.55 E-value=1.2e+02 Score=21.02 Aligned_cols=60 Identities=20% Similarity=0.291 Sum_probs=40.1
Q ss_pred CcEEEEEechhHH-HHHHHHHHHHhCCCcEEEEEecccc-----------------------CCCHHHHHHHHhCCC-eE
Q psy7291 77 KDITIVGHSKAVE-TALDAAKILAGQGIDAEVINLRSLR-----------------------PLDIETITKSVMKTN-YL 131 (158)
Q Consensus 77 ~~~~ii~~G~~~~-~a~ea~~~L~~~gi~~~vi~~~~l~-----------------------Pld~~~l~~~~~~~~-~v 131 (158)
+-+++||=|.... ...++++.+++.|+.+-+|.+..-. .+|.+.|.+++.... ..
T Consensus 113 ~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG~~ 192 (218)
T 3ibs_A 113 RAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKGIY 192 (218)
T ss_dssp EEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEEEE
T ss_pred cEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCCEE
Confidence 4577778785432 3567788888888888777766421 577888888887543 45
Q ss_pred EEEeC
Q psy7291 132 ISVEG 136 (158)
Q Consensus 132 vvvEe 136 (158)
+.+.+
T Consensus 193 ~~~~~ 197 (218)
T 3ibs_A 193 VRVDN 197 (218)
T ss_dssp EEECS
T ss_pred EECCC
Confidence 55543
No 330
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=24.53 E-value=57 Score=26.95 Aligned_cols=28 Identities=32% Similarity=0.418 Sum_probs=23.7
Q ss_pred CcccCCHHHHHHHHHHHHh--C-CCcEEEEe
Q psy7291 1 VVSPYNSEDAKGLLKAAIR--D-PDPVVFLE 28 (158)
Q Consensus 1 V~~P~d~~e~~~~l~~a~~--~-~~P~~iR~ 28 (158)
|+.|.+.+|+.++++.|.+ + +-|+.+|-
T Consensus 72 vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G 102 (534)
T 1w1o_A 72 VLYPSSTGDLVALLSAANSTPGWPYTIAFRG 102 (534)
T ss_dssp EECCSSHHHHHHHHHHHHHCTTCCCCEEEES
T ss_pred EEecCCHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 4689999999999999987 4 66888873
No 331
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=24.39 E-value=85 Score=23.26 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=23.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|...-. ++..|.+.|.++.|++-.
T Consensus 6 ~~vvIIG~G~aGl~---aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 6 TDVLIVGAGPTGLF---AGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEEESS
T ss_pred CcEEEECCCHHHHH---HHHHHHhCCCCEEEEeCC
Confidence 47999998875433 344566679999999864
No 332
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=24.26 E-value=1.4e+02 Score=18.72 Aligned_cols=66 Identities=15% Similarity=0.188 Sum_probs=41.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHH----HHHHh-CCCeEEEEeCCcCCCChHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETI----TKSVM-KTNYLISVEGGWPQCGIGS 145 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l----~~~~~-~~~~vvvvEe~~~~GG~g~ 145 (158)
..+++|.+. +.+..+.+|.+.|.+.|+....+++... + +...+ .+... .+-..+++ ++...||+..
T Consensus 16 ~~~v~vy~~-~~Cp~C~~ak~~L~~~~i~~~~~dvd~~-~-~~~~~~~~l~~~~g~~tvP~vfi-~g~~igG~d~ 86 (114)
T 3h8q_A 16 RSRVVIFSK-SYCPHSTRVKELFSSLGVECNVLELDQV-D-DGARVQEVLSEITNQKTVPNIFV-NKVHVGGCDQ 86 (114)
T ss_dssp HCSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEETTTS-T-THHHHHHHHHHHHSCCSSCEEEE-TTEEEESHHH
T ss_pred cCCEEEEEc-CCCCcHHHHHHHHHHcCCCcEEEEecCC-C-ChHHHHHHHHHHhCCCccCEEEE-CCEEEeCHHH
Confidence 356777655 6788899999999999999999887653 1 22223 22221 22235555 4555788753
No 333
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=24.20 E-value=96 Score=23.20 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=25.8
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|..+.||++|.+...+ ++.|...|.++.+++..
T Consensus 153 l~g~~v~IiG~G~iG~~~---a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSV---ARKFAALGAKVKVGARE 187 (293)
T ss_dssp STTCEEEEECCSHHHHHH---HHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeeCHHHHHH---HHHHHhCCCEEEEEECC
Confidence 347889999999987765 44555668888777754
No 334
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=24.19 E-value=71 Score=23.69 Aligned_cols=32 Identities=16% Similarity=0.349 Sum_probs=23.6
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|...-. ++..|.+.|+++.+++-.
T Consensus 4 ~~vvIIG~G~aGl~---~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 4 VDVVVIGGGQSGLS---AGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHSSCCEEEECCS
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCCEEEEECC
Confidence 47999998875443 345566779999999855
No 335
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=24.16 E-value=1.2e+02 Score=23.06 Aligned_cols=58 Identities=14% Similarity=0.103 Sum_probs=33.2
Q ss_pred CCcEEEEEechhH--HHHHHHHHHHHhCCC-cEEEEEeccccCCCHHHHHHHHhCCCeEEE
Q psy7291 76 GKDITIVGHSKAV--ETALDAAKILAGQGI-DAEVINLRSLRPLDIETITKSVMKTNYLIS 133 (158)
Q Consensus 76 g~~~~ii~~G~~~--~~a~ea~~~L~~~gi-~~~vi~~~~l~Pld~~~l~~~~~~~~~vvv 133 (158)
+.++++|.+-+.- ....+..+.+++.|. ++.+++++.-.-.+.+.+.+.+...+.|++
T Consensus 56 ~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v 116 (291)
T 3en0_A 56 DAIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFM 116 (291)
T ss_dssp GCEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEE
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEE
Confidence 3689999775532 222223334444587 678887765432233445667777776665
No 336
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=24.11 E-value=95 Score=24.26 Aligned_cols=57 Identities=7% Similarity=0.153 Sum_probs=35.7
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCC----HHHHHHHHhCCCeEEE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLD----IETITKSVMKTNYLIS 133 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld----~~~l~~~~~~~~~vvv 133 (158)
..|..+.||++|.+...+ ++.|+.-|.++..++...-.-++ ...+.++++..+.|++
T Consensus 146 l~gktvgIiGlG~IG~~v---A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l 206 (343)
T 2yq5_A 146 IYNLTVGLIGVGHIGSAV---AEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSL 206 (343)
T ss_dssp GGGSEEEEECCSHHHHHH---HHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEE
T ss_pred cCCCeEEEEecCHHHHHH---HHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEE
Confidence 447899999999998775 44555668888887764311111 1135666766654443
No 337
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=24.08 E-value=2.3e+02 Score=21.25 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=26.0
Q ss_pred hCCCcEEEEEeccccCCCHHHHHHHHhC-CCeEEEEeC-CcCCCChH--HHHHHHHHcCC
Q psy7291 100 GQGIDAEVINLRSLRPLDIETITKSVMK-TNYLISVEG-GWPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 100 ~~gi~~~vi~~~~l~Pld~~~l~~~~~~-~~~vvvvEe-~~~~GG~g--~~i~~~l~~~~ 155 (158)
..|.++..+.+..=..+|.+.+.+.++. ..+++++.. +++.|..- .+|.+.+.++|
T Consensus 114 ~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~ 173 (396)
T 2ch1_A 114 RYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHD 173 (396)
T ss_dssp HTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTT
T ss_pred HcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcC
Confidence 3455555554432223566666666543 234455544 23344322 34555554443
No 338
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=23.93 E-value=99 Score=21.96 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=24.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|++||+-|...- +++..|.+.|.++.++.-.
T Consensus 3 ~~dVvVVGgG~aGl---~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGA---ETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHH---HHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHH---HHHHHHHHCCCCEEEEecC
Confidence 35899999887543 4555677779999999864
No 339
>1sph_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 2.00A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1jem_A* 2hid_A 2hpr_A
Probab=23.88 E-value=1.3e+02 Score=18.35 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=21.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAG 100 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~ 100 (158)
|..+.|.+.|.....|++++..|-+
T Consensus 58 g~~i~i~~~G~De~~A~~~l~~l~~ 82 (88)
T 1sph_A 58 GAEITISASGADENDALNALEETMK 82 (88)
T ss_dssp TCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 7889999999999999998887654
No 340
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=23.84 E-value=97 Score=24.08 Aligned_cols=37 Identities=22% Similarity=0.149 Sum_probs=25.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCC--cEEEEEeccccCC
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGI--DAEVINLRSLRPL 116 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi--~~~vi~~~~l~Pl 116 (158)
.+++||+-|...-. ++..|.+.|. ++.|++-..-.|+
T Consensus 2 k~vvIIGaG~aGl~---aA~~L~~~g~~~~V~lie~~~~~~y 40 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQ---VAVSLRQAKYPGRIALINDEKHLPY 40 (404)
T ss_dssp CCEEEECCSHHHHH---HHHHHHHTTCCSCEEEECCSSSSSB
T ss_pred CCEEEEcChHHHHH---HHHHHHhhCcCCCEEEEeCCCCCCC
Confidence 47999998865433 4566777787 7899876543333
No 341
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=23.78 E-value=2e+02 Score=20.55 Aligned_cols=78 Identities=9% Similarity=0.101 Sum_probs=44.0
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCC----------hHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCG----------IGS 145 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG----------~g~ 145 (158)
|-++.++..+.....-.+.++.+..++++.-++.... + +.+.+..+.+..-.+|+++......+ .|.
T Consensus 38 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~--~-~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~ 114 (291)
T 3egc_A 38 GYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSE--G-EHDYLRTELPKTFPIVAVNRELRIPGCGAVLSENVRGAR 114 (291)
T ss_dssp TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCS--S-CCHHHHHSSCTTSCEEEESSCCCCTTCEEEEECHHHHHH
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCC--C-ChHHHHHhhccCCCEEEEecccCCCCCCEEEECcHHHHH
Confidence 5667777666655555666777777666654442222 2 33444444344456777776554222 245
Q ss_pred HHHHHHHcCCC
Q psy7291 146 EISARIMEIPY 156 (158)
Q Consensus 146 ~i~~~l~~~~~ 156 (158)
.++++|.+.|.
T Consensus 115 ~a~~~L~~~G~ 125 (291)
T 3egc_A 115 TAVEYLIARGH 125 (291)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 66677776664
No 342
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=23.34 E-value=2.7e+02 Score=21.74 Aligned_cols=54 Identities=15% Similarity=0.184 Sum_probs=32.7
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc-------------ccCCCHHHHHHHHh--CCCeEEE
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS-------------LRPLDIETITKSVM--KTNYLIS 133 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~-------------l~Pld~~~l~~~~~--~~~~vvv 133 (158)
..++|++.|..... .+..+++.|+++.+++..- +...|.+.+.++++ +.+.|+.
T Consensus 20 ~~ili~g~g~~g~~---~~~a~~~~G~~v~~v~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~ 88 (433)
T 2dwc_A 20 QKILLLGSGELGKE---IAIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIP 88 (433)
T ss_dssp CEEEEESCSHHHHH---HHHHHHHTTCEEEEEESSTTCHHHHHSSEEEESCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCHHHHH---HHHHHHHCCCEEEEEECCCCChhhhhcceEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 46888877754443 4445556799888887531 12346677777775 3444443
No 343
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=23.33 E-value=97 Score=25.15 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=24.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|++||+-|..--. ++-.|.+.|+++.|++-.
T Consensus 11 ~~dVlIVGaGpaGl~---~A~~La~~G~~v~vlE~~ 43 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMM---LAGELRLAGVEVVVLERL 43 (500)
T ss_dssp BCSEEEECCSHHHHH---HHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHH---HHHHHHHCCCCEEEEeCC
Confidence 568999999875443 234577789999999754
No 344
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=23.30 E-value=77 Score=24.09 Aligned_cols=29 Identities=21% Similarity=0.294 Sum_probs=21.1
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
+++||+-|...-. ++-.|.+.|+++.|+.
T Consensus 3 ~V~IVGaGpaGl~---~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 3 HVGIIGAGIGGTC---LAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEEECCSHHHHH---HHHHHHHTTCEEEEEC
T ss_pred EEEEECcCHHHHH---HHHHHHhCCCCEEEEe
Confidence 4889988865433 2345778899999995
No 345
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=23.30 E-value=85 Score=23.75 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=22.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
..|++||+-|..-.. ++-.|.+.|.+|.|++-
T Consensus 6 ~~dVvVIG~Gi~Gls---~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLS---SALILARKGYSVHILAR 37 (363)
T ss_dssp SCEEEEECCSHHHHH---HHHHHHHTTCEEEEEES
T ss_pred CCCEEEECCCHHHHH---HHHHHHhCCCEEEEEec
Confidence 468999998865432 23345667999999985
No 346
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=23.27 E-value=89 Score=24.92 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=29.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP 115 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P 115 (158)
+.++.||+.|..... +++.|.++|..+.+.|.+...|
T Consensus 5 ~~~v~viG~G~~G~~---~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLS---CVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHH---HHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHH---HHHHHHhCCCEEEEEECCCCcc
Confidence 678999999975444 3577888999999999987666
No 347
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=23.27 E-value=1.3e+02 Score=23.19 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=24.9
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++++||+-|.++..- ++..|...|-.+++.+-+
T Consensus 164 ~gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAP--MHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHH--HHHHHHhCCCeEEEEECC
Confidence 48899999999765543 345666678778877643
No 348
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=23.24 E-value=92 Score=24.28 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=24.3
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCC-cEEEEEecc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGI-DAEVINLRS 112 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi-~~~vi~~~~ 112 (158)
..|++||+-|...-. ++-.|.+.|. +|.|++-..
T Consensus 6 ~~dVvIIGgG~aGls---aA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTS---TALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHH---HHHHHHHTTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHH---HHHHHHHcCCCcEEEEeCCC
Confidence 468999999865432 3445667799 899997654
No 349
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=23.22 E-value=64 Score=24.91 Aligned_cols=48 Identities=23% Similarity=0.317 Sum_probs=32.2
Q ss_pred HHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhC----CCeEEEEeCCc
Q psy7291 91 ALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMK----TNYLISVEGGW 138 (158)
Q Consensus 91 a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~----~~~vvvvEe~~ 138 (158)
..-++++|+.-|+..+++-+|+=+|++++.-.++..- .+.|+.+-+-.
T Consensus 219 TQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~VI~~~Dv~ 270 (295)
T 2vo1_A 219 TQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQVICVHDVS 270 (295)
T ss_dssp HHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGGEEEECCCS
T ss_pred hHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHHEEEcCCcC
Confidence 3445666666788888999999999998765554432 24666665543
No 350
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=23.11 E-value=2.7e+02 Score=21.66 Aligned_cols=40 Identities=10% Similarity=0.080 Sum_probs=22.4
Q ss_pred CHHHHHHHHhCCCeEEEEeCCc-CCCChH--HHHHHHHHcCCC
Q psy7291 117 DIETITKSVMKTNYLISVEGGW-PQCGIG--SEISARIMEIPY 156 (158)
Q Consensus 117 d~~~l~~~~~~~~~vvvvEe~~-~~GG~g--~~i~~~l~~~~~ 156 (158)
|.+.+.+.++...+++++|.-. +.|-.- ..|++...++|+
T Consensus 141 d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~ 183 (400)
T 3nmy_A 141 DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGL 183 (400)
T ss_dssp SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCC
Confidence 5566777666544677777633 333322 556666665553
No 351
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=23.04 E-value=1e+02 Score=24.13 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=26.3
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|..+.||++|.+...+ ++.|+.-|.++.+++..
T Consensus 162 l~gktvGIIG~G~IG~~v---A~~l~~~G~~V~~~dr~ 196 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLL---LQRLKPFGCNLLYHDRL 196 (351)
T ss_dssp STTCEEEEECCSHHHHHH---HHHHGGGCCEEEEECSS
T ss_pred ccCCEEeEEEeCHHHHHH---HHHHHHCCCEEEEeCCC
Confidence 457899999999988764 45666668887777643
No 352
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=23.02 E-value=1e+02 Score=23.43 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=26.4
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
...|..+.||++|.+...+. +.|+..|.++.+++..
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A---~~l~~~G~~V~~~d~~ 174 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVA---KIANALGMNILLYDPY 174 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHH---HHHHHTTCEEEEECSS
T ss_pred ccCCceEEEEccCHHHHHHH---HHHHHCCCEEEEECCC
Confidence 35578999999999988754 4455568877777654
No 353
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=22.95 E-value=2.2e+02 Score=21.01 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=46.8
Q ss_pred CCcEEEEEechhHHH-HHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCC-----CeEEEEeCCcCCCChHHHHHH
Q psy7291 76 GKDITIVGHSKAVET-ALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKT-----NYLISVEGGWPQCGIGSEISA 149 (158)
Q Consensus 76 g~~~~ii~~G~~~~~-a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~-----~~vvvvEe~~~~GG~g~~i~~ 149 (158)
|+.+.|++-|..+.. |+=|+.+....++.-.=|++.++--.-++.|.+.+... -.++|+-.+. .||-=++-..
T Consensus 87 gkrvii~gggaqv~qva~gai~eadrhnirgerisvdt~p~vge~~l~~av~av~~lpr~~~lvlags~-mgg~i~~~v~ 165 (223)
T 1y7p_A 87 GKRVIILGGGALVSQVAIGAISEADRHNLRGERISVDTMPVVGEEEIAEAVKAVSRLHRAEVLVLAGGI-MGGKITEEVK 165 (223)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHHHTSCCEEEEEEECCSHHHHHHHHHHGGGSTTEEEEEEESSB-CCTHHHHHHH
T ss_pred CcEEEEECCcHHHHHHHHhhcchhhhcccccceeeeecceecCHHHHHHHHHHHhhccccceeeEeccc-ccchHHHHHH
Confidence 889999999986654 44454444333222333444455445677777766532 2467776444 6776555555
Q ss_pred HHHcCCC
Q psy7291 150 RIMEIPY 156 (158)
Q Consensus 150 ~l~~~~~ 156 (158)
.+.++|+
T Consensus 166 ~~~~~~i 172 (223)
T 1y7p_A 166 KLRKSGI 172 (223)
T ss_dssp HHGGGTC
T ss_pred HHHHCCC
Confidence 6666554
No 354
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=22.94 E-value=2.1e+02 Score=23.53 Aligned_cols=41 Identities=29% Similarity=0.318 Sum_probs=29.1
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP-LDIE 119 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~ 119 (158)
+++++||+-|.. ++|.+..|.+.|.+++++....+-| +|.+
T Consensus 286 ~~~vvViGgG~~---g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~ 327 (598)
T 2x8g_A 286 PGKTLVIGASYV---ALECAGFLASLGGDVTVMVRSILLRGFDQQ 327 (598)
T ss_dssp CCSEEEECCSHH---HHHHHHHHHHTTCCEEEEESSCSSTTSCHH
T ss_pred CCEEEEECCCHH---HHHHHHHHHHcCCEEEEEECCcCcCcCCHH
Confidence 467999988754 4566777778899999998654333 5654
No 355
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=22.89 E-value=1.7e+02 Score=21.29 Aligned_cols=47 Identities=19% Similarity=0.297 Sum_probs=30.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM 126 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~ 126 (158)
+.+++||+.|.. +.|.+..|...|.+++++...--.+++.. +.+.+.
T Consensus 144 ~~~v~VvG~G~~---g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~-~~~~l~ 190 (310)
T 1fl2_A 144 GKRVAVIGGGNS---GVEAAIDLAGIVEHVTLLEFAPEMKADQV-LQDKLR 190 (310)
T ss_dssp TCEEEEECCSHH---HHHHHHHHHTTBSEEEEECSSSSCCSCHH-HHHHHH
T ss_pred CCEEEEECCCHH---HHHHHHHHHHhCCEEEEEEeCcccCccHH-HHHHHh
Confidence 678999988764 44556677777888999875543345544 334333
No 356
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=22.87 E-value=97 Score=23.65 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=26.2
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
...|..+.||++|.+.... ++.|+..|.++.+++..
T Consensus 139 ~l~g~~vgIIG~G~IG~~~---A~~l~~~G~~V~~~d~~ 174 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKV---GIIANAMGMKVLAYDIL 174 (313)
T ss_dssp CCTTCEEEEESCSHHHHHH---HHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEEeeCHHHHHH---HHHHHHCCCEEEEECCC
Confidence 3457899999999998775 34555668877777643
No 357
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=22.83 E-value=2.3e+02 Score=21.75 Aligned_cols=39 Identities=23% Similarity=0.261 Sum_probs=23.4
Q ss_pred CHHHHHHHHhCCCeEEEEeCC-cCCCChH--HHHHHHHHcCC
Q psy7291 117 DIETITKSVMKTNYLISVEGG-WPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 117 d~~~l~~~~~~~~~vvvvEe~-~~~GG~g--~~i~~~l~~~~ 155 (158)
|.+.+.+.++...+++++|.- ...|.+- ..|++...++|
T Consensus 140 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g 181 (392)
T 3qhx_A 140 DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSS 181 (392)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHT
T ss_pred CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcC
Confidence 667777777655567777763 3444332 56666666554
No 358
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=22.75 E-value=1.7e+02 Score=23.01 Aligned_cols=32 Identities=28% Similarity=0.225 Sum_probs=20.7
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhCCCcEEEE
Q psy7291 77 KDITIVGHSK-AVETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 77 ~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi 108 (158)
.++.|+..|. ....+.+.++.|++.|+++.+-
T Consensus 330 ~~v~i~~~~~~~~~~a~~l~~~Lr~~Gi~v~~d 362 (420)
T 1qe0_A 330 LDLFIVTMGDQADRYAVKLLNHLRHNGIKADKD 362 (420)
T ss_dssp CSEEEEECHHHHHHHHHHHHHHHHTTTCCEEEC
T ss_pred CeEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 4677777763 3455666777777777776553
No 359
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=22.75 E-value=1.9e+02 Score=23.82 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=39.1
Q ss_pred CCcEEEEEech----hHHHHHHHHHHHHhCC-CcEEEEEeccccCCCHHHHHHH-HhCCCeEEEEeC
Q psy7291 76 GKDITIVGHSK----AVETALDAAKILAGQG-IDAEVINLRSLRPLDIETITKS-VMKTNYLISVEG 136 (158)
Q Consensus 76 g~~~~ii~~G~----~~~~a~ea~~~L~~~g-i~~~vi~~~~l~Pld~~~l~~~-~~~~~~vvvvEe 136 (158)
.-++.|+..|. ....|.+.++.|++.| +++. +|.+ .-+-.+ +++. ..+...+++|.+
T Consensus 398 P~~v~Vip~~~~~~~~~~~a~~l~~~Lr~~G~i~v~-~D~~--~sig~k-~~~ad~~g~p~~iivG~ 460 (505)
T 1ati_A 398 PIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVL-YEDT--GNIGKA-YRRHDEVGTPFAVTVDY 460 (505)
T ss_dssp SCSEEEEESCSSCHHHHHHHHHHHHHHHTTCSSCEE-ECCC--SCHHHH-HHHHHHTTCSEEEEECH
T ss_pred CceEEEEEcCCccHHHHHHHHHHHHHHhccCCEEEE-ECCC--CCHHHH-HHHHHHCCCCEEEEECh
Confidence 35899999985 6677888899999989 8876 4444 444333 3332 336778888854
No 360
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=22.71 E-value=96 Score=22.93 Aligned_cols=29 Identities=24% Similarity=0.296 Sum_probs=0.0
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
|++||+-|...-. ++..|.+.|.++.+++
T Consensus 10 dvvIIG~G~aGl~---aA~~l~~~g~~v~lie 38 (325)
T 2q7v_A 10 DVVIIGGGPAGLT---AAIYTGRAQLSTLILE 38 (325)
T ss_dssp EEEEECCSHHHHH---HHHHHHHTTCCEEEEE
T ss_pred CEEEECCCHHHHH---HHHHHHHcCCcEEEEe
No 361
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=22.63 E-value=87 Score=24.90 Aligned_cols=31 Identities=13% Similarity=0.248 Sum_probs=23.7
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
.|++||+-|+..-. ++..|.+.|.++.||+-
T Consensus 6 ~DVvVIGaG~aGl~---aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 6 YDLFVIGGGSGGVR---SGRLAAALGKKVAIAEE 36 (463)
T ss_dssp EEEEEECCSHHHHH---HHHHHHTTTCCEEEEES
T ss_pred CcEEEECcCHHHHH---HHHHHHhCCCEEEEEeC
Confidence 48999999975433 45567777999999985
No 362
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=22.61 E-value=1e+02 Score=23.65 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=26.4
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|..+.||++|.+...+ ++.|...|.++.+++.+
T Consensus 153 l~g~~vgIIG~G~iG~~i---A~~l~~~G~~V~~~d~~ 187 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAI---ARRLKPFGVQRFLYTGR 187 (330)
T ss_dssp CTTCEEEEECCSHHHHHH---HHHHGGGTCCEEEEESS
T ss_pred CCCCEEEEECcCHHHHHH---HHHHHHCCCEEEEECCC
Confidence 457889999999988765 34556668888888754
No 363
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=22.59 E-value=94 Score=24.94 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=23.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
..|++||+-|+..-. |+..|.+.|.++.+|+-
T Consensus 25 ~~dVvVIGgG~aGl~---aA~~la~~G~~V~liEk 56 (491)
T 3urh_A 25 AYDLIVIGSGPGGYV---CAIKAAQLGMKVAVVEK 56 (491)
T ss_dssp -CCEEEECCSHHHHH---HHHHHHHTTCCEEEEES
T ss_pred cCCEEEECCCHHHHH---HHHHHHHCCCeEEEEec
Confidence 368999999975433 34556677999999985
No 364
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=22.57 E-value=82 Score=23.12 Aligned_cols=32 Identities=22% Similarity=0.080 Sum_probs=23.6
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.+++||+-|...- .++..|.+.|.++.|++-.
T Consensus 8 ~~vvIIG~G~aGl---~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGL---FTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHH---HHHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCCHHHH---HHHHHHHHCCCCEEEEEcC
Confidence 5799999886543 3455666779999999764
No 365
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=22.56 E-value=84 Score=24.80 Aligned_cols=34 Identities=29% Similarity=0.277 Sum_probs=24.0
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
..+++||+-|..... ++-.|.+.|+++.|++-+.
T Consensus 22 ~~~ViIVGaGpaGl~---~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLH---LGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHH---HHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHH---HHHHHHHCCCeEEEEcCCC
Confidence 357999988875443 2445777899999998653
No 366
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=22.44 E-value=1.5e+02 Score=22.66 Aligned_cols=78 Identities=9% Similarity=0.011 Sum_probs=41.3
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEec-cc-cCCCHHHHHH----HHhC-CCeEEEEeCCcCCCC--hHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLR-SL-RPLDIETITK----SVMK-TNYLISVEGGWPQCG--IGS 145 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~-~l-~Pld~~~l~~----~~~~-~~~vvvvEe~~~~GG--~g~ 145 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.+ +. +|.+.+.+.+ +++. .-.|+...--....| +..
T Consensus 79 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~ 158 (318)
T 3qfe_A 79 PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDS 158 (318)
T ss_dssp TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCH
Confidence 44456677775 5666777677776668777666666 33 4566554333 3332 235666665443323 445
Q ss_pred HHHHHHHc
Q psy7291 146 EISARIME 153 (158)
Q Consensus 146 ~i~~~l~~ 153 (158)
+....|++
T Consensus 159 ~~~~~La~ 166 (318)
T 3qfe_A 159 DMITTIAR 166 (318)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555554
No 367
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=22.32 E-value=91 Score=25.00 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=23.6
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
.|++||+-|...-. |+..|.+.|.++.|++-
T Consensus 27 ~DVvVIGgG~aGl~---aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 27 FDLFVIGSGSGGVR---AARLAGALGKRVAIAEE 57 (484)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEEES
T ss_pred CCEEEECcCHHHHH---HHHHHHhCcCEEEEEeC
Confidence 58999999975433 45566777999999985
No 368
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=22.31 E-value=68 Score=24.97 Aligned_cols=32 Identities=25% Similarity=0.221 Sum_probs=24.7
Q ss_pred CCcEEEEEechhH-----HHHHHHHHHHHhCCCcEEE
Q psy7291 76 GKDITIVGHSKAV-----ETALDAAKILAGQGIDAEV 107 (158)
Q Consensus 76 g~~~~ii~~G~~~-----~~a~ea~~~L~~~gi~~~v 107 (158)
|..+.|||-.+.. .....+++.|++.|.++.+
T Consensus 13 GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~ 49 (336)
T 3sr3_A 13 GDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE 49 (336)
T ss_dssp TCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE
Confidence 8899999987754 3455678889998988665
No 369
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=22.21 E-value=81 Score=24.25 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=23.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|...-. ++..|.+.|+++.|++-.
T Consensus 7 ~dVvIVGaG~aGl~---~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 7 IDVLINGCGIGGAM---LAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHH---HHHHHHhCCCcEEEEeCC
Confidence 47999998875433 344577779999999754
No 370
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=22.18 E-value=1.2e+02 Score=23.25 Aligned_cols=50 Identities=8% Similarity=0.262 Sum_probs=31.4
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhC--CCcEEEEEeccccCCCHHHHHHHHhCCCeE
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQ--GIDAEVINLRSLRPLDIETITKSVMKTNYL 131 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~--gi~~~vi~~~~l~Pld~~~l~~~~~~~~~v 131 (158)
..|++++||+.|.++..- ++..|... |-.+++.+-++ +.+.+.++..+-|
T Consensus 156 l~gk~vvVvG~s~iVG~p--~A~lL~~~g~~atVtv~h~~t------~~L~~~~~~ADIV 207 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRP--LGLLLTRRSENATVTLCHTGT------RDLPALTRQADIV 207 (281)
T ss_dssp CTTCEEEEECCCTTTHHH--HHHHHTSTTTCCEEEEECTTC------SCHHHHHTTCSEE
T ss_pred CCCCEEEEECCCcHHHHH--HHHHHhcCCCCCEEEEEECch------hHHHHHHhhCCEE
Confidence 348899999999876554 34566666 66677665443 2355556555433
No 371
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=22.09 E-value=89 Score=24.12 Aligned_cols=33 Identities=33% Similarity=0.463 Sum_probs=24.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|++||+-|...-. ++..|.+.|+++.|+.-.
T Consensus 26 ~~dV~IVGaG~aGl~---~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLT---MAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp TCEEEEECCSHHHHH---HHHHHHTTTCEEEEEECS
T ss_pred CCCEEEECCCHHHHH---HHHHHHHCCCCEEEEeCC
Confidence 458999998875433 344677789999999754
No 372
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=22.05 E-value=1.1e+02 Score=23.20 Aligned_cols=28 Identities=18% Similarity=0.125 Sum_probs=22.1
Q ss_pred echhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 84 HSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 84 ~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|.....+.+-++.|.++|+++.|+...
T Consensus 17 ~gG~~~~~~~la~~L~~~G~~V~v~~~~ 44 (439)
T 3fro_A 17 VGGLAEALTAISEALASLGHEVLVFTPS 44 (439)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 3556667778888999999999999743
No 373
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=21.89 E-value=2.4e+02 Score=20.68 Aligned_cols=25 Identities=16% Similarity=0.251 Sum_probs=12.5
Q ss_pred CCcEEEEEeccccCCCHHHHHHHHh
Q psy7291 102 GIDAEVINLRSLRPLDIETITKSVM 126 (158)
Q Consensus 102 gi~~~vi~~~~l~Pld~~~l~~~~~ 126 (158)
|.++..+.+..-..+|.+.+.+.++
T Consensus 103 g~~~~~v~~~~~~~~d~~~l~~~l~ 127 (366)
T 1m32_A 103 GIAHHAYDCGEVARPDVQAIDAILN 127 (366)
T ss_dssp TCCEEEEECCTTSCCCHHHHHHHHH
T ss_pred CCceEEEeCCCCCCCCHHHHHHHHh
Confidence 5555555443333355555555554
No 374
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=21.88 E-value=84 Score=23.05 Aligned_cols=36 Identities=19% Similarity=0.330 Sum_probs=26.5
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCC-cEEEEEecccc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGI-DAEVINLRSLR 114 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi-~~~vi~~~~l~ 114 (158)
+..++||+.|.....+.+ .|...|+ ++.++|...+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~---~La~~Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQ---YLASAGVGNLTLLDFDTVS 67 (249)
T ss_dssp HCEEEEECCSHHHHHHHH---HHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEEeeCHHHHHHHH---HHHHcCCCeEEEEcCCCcc
Confidence 578999999987776544 4555587 78999877643
No 375
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=21.86 E-value=1.9e+02 Score=21.13 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=25.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
+..++||+.|.. +.+.+..|.+.|.++.++....
T Consensus 173 ~~~v~vvG~G~~---g~e~a~~l~~~g~~v~~v~~~~ 206 (338)
T 3itj_A 173 NKPLAVIGGGDS---ACEEAQFLTKYGSKVFMLVRKD 206 (338)
T ss_dssp TSEEEEECSSHH---HHHHHHHHTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHH---HHHHHHHHHhcCCEEEEEEcCC
Confidence 577899987754 4566777888899999887654
No 376
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=21.85 E-value=70 Score=25.46 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=35.1
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC---CCHHHHHHHHhCCCeEEE
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP---LDIETITKSVMKTNYLIS 133 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P---ld~~~l~~~~~~~~~vvv 133 (158)
.|..+.||++|.+...+ ++.|+..|.++.+++...-.. .....+.++++..+.|++
T Consensus 115 ~g~tvGIIGlG~IG~~v---A~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l 173 (380)
T 2o4c_A 115 AERTYGVVGAGQVGGRL---VEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISL 173 (380)
T ss_dssp GGCEEEEECCSHHHHHH---HHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEE
T ss_pred CCCEEEEEeCCHHHHHH---HHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEE
Confidence 47789999999998875 445556688888777532110 111235666766654444
No 377
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=21.80 E-value=2e+02 Score=22.35 Aligned_cols=77 Identities=5% Similarity=0.013 Sum_probs=43.5
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++.+.+.+.+ +++.. -.|+...--...| -+..+..
T Consensus 99 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~ 178 (343)
T 2v9d_A 99 RRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALV 178 (343)
T ss_dssp TSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHH
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHH
Confidence 34446677775 5566777666666668877666666665556655443 33332 3566665433333 2444544
Q ss_pred HHHH
Q psy7291 149 ARIM 152 (158)
Q Consensus 149 ~~l~ 152 (158)
..|+
T Consensus 179 ~~La 182 (343)
T 2v9d_A 179 KTLA 182 (343)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 378
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.66 E-value=67 Score=23.00 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=20.8
Q ss_pred CCcEEEEEechh--HHHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSKA--VETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~~--~~~a~ea~~~L~~~gi~~~vi 108 (158)
|.++++++.|-. +....+.++.+.+.|+++.+|
T Consensus 94 g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~vi 128 (232)
T 2qbu_A 94 GRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMV 128 (232)
T ss_dssp TCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEe
Confidence 678888888842 234444455666666666665
No 379
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=21.64 E-value=1e+02 Score=21.78 Aligned_cols=30 Identities=10% Similarity=0.019 Sum_probs=25.5
Q ss_pred CCCeEEEEeCCcCCCChHHHHHHHHHcCCC
Q psy7291 127 KTNYLISVEGGWPQCGIGSEISARIMEIPY 156 (158)
Q Consensus 127 ~~~~vvvvEe~~~~GG~g~~i~~~l~~~~~ 156 (158)
+.++|++||+-.-+|+--...++.|.+.|.
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga 148 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGP 148 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCC
Confidence 357899999999998888888888888775
No 380
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=21.61 E-value=1.1e+02 Score=19.37 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=21.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAG 100 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~ 100 (158)
|..+.|.+.|.....|++++..|-+
T Consensus 70 G~~i~i~a~G~Dee~Al~~l~~li~ 94 (100)
T 1kkl_H 70 GAEITISASGADENDALNALEETMK 94 (100)
T ss_dssp TCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 7789999999999999998877654
No 381
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=21.54 E-value=2.4e+02 Score=20.44 Aligned_cols=47 Identities=19% Similarity=0.189 Sum_probs=31.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSV 125 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~ 125 (158)
+..++||+.|.. +.|.+..|.+.|.+++++...--.+++.+....+.
T Consensus 143 ~~~v~VvG~G~~---g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~ 189 (311)
T 2q0l_A 143 NKEVAVLGGGDT---AVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAK 189 (311)
T ss_dssp TSEEEEECCSHH---HHHHHHHHHTTSSEEEEECSSSSCCSCHHHHHHHH
T ss_pred CCEEEEECCCHH---HHHHHHHHHhcCCEEEEEeeCCccCCCHHHHHHHh
Confidence 678999987754 44566678788999999876543345555444444
No 382
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=21.51 E-value=64 Score=24.05 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=21.6
Q ss_pred CCcEEEEEech--hHHHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSK--AVETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~--~~~~a~ea~~~L~~~gi~~~vi 108 (158)
|.++++++.|- .+....+.++.|.+.|+.+.+|
T Consensus 76 G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~vevi 110 (264)
T 3ndc_A 76 GQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVT 110 (264)
T ss_dssp TCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEe
Confidence 78899999884 2344445556666666666664
No 383
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=21.50 E-value=2.7e+02 Score=21.15 Aligned_cols=79 Identities=14% Similarity=0.046 Sum_probs=44.5
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCC-cEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGI-DAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEI 147 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi-~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i 147 (158)
|+--+|+++|+ .+..+.+-++..++.|. +.-++-.++..+.+.+.+.+ +++.. -.|+...--...| .+..+.
T Consensus 75 grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~ 154 (311)
T 3h5d_A 75 GRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPET 154 (311)
T ss_dssp SSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHH
T ss_pred CCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHH
Confidence 44456777876 56777777777777664 76666665555556654433 33332 3566665432233 345555
Q ss_pred HHHHHcC
Q psy7291 148 SARIMEI 154 (158)
Q Consensus 148 ~~~l~~~ 154 (158)
...|++.
T Consensus 155 ~~~La~~ 161 (311)
T 3h5d_A 155 MLRLADH 161 (311)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 5555543
No 384
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=21.45 E-value=60 Score=24.57 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=22.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|..--. ++-.|.+.|.++.|++-.
T Consensus 3 ~dvvIIG~Gi~Gl~---~A~~La~~G~~V~vle~~ 34 (372)
T 2uzz_A 3 YDLIIIGSGSVGAA---AGYYATRAGLNVLMTDAH 34 (372)
T ss_dssp EEEEESCTTHHHHH---HHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHH---HHHHHHHCCCeEEEEecC
Confidence 47999988864332 234566679999999764
No 385
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=21.45 E-value=53 Score=21.77 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHH---------hCCCeEEEEeCCcCCCChH
Q psy7291 91 ALDAAKILAGQGIDAEVINLRSLRPLDIETITKSV---------MKTNYLISVEGGWPQCGIG 144 (158)
Q Consensus 91 a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~---------~~~~~vvvvEe~~~~GG~g 144 (158)
+..|...|+.+|+...-+|+.. .|--.+.+.+.. ...-..|++++.. .||+-
T Consensus 19 c~~aK~lL~~kgV~feEidI~~-d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~-iGG~D 79 (121)
T 1u6t_A 19 QQDVLGFLEANKIGFEEKDIAA-NEENRKWMRENVPENSRPATGYPLPPQIFNESQY-RGDYD 79 (121)
T ss_dssp HHHHHHHHHHTTCCEEEEECTT-CHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEE-EEEHH
T ss_pred HHHHHHHHHHCCCceEEEECCC-CHHHHHHHHHhccccccccCCCcCCCEEEECCEE-EechH
Confidence 4677888999999999999986 222222333332 1123567787766 68875
No 386
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=21.41 E-value=2.4e+02 Score=20.59 Aligned_cols=48 Identities=17% Similarity=0.269 Sum_probs=30.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM 126 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~ 126 (158)
+..++||+.|.. +.+.+..|.+.|.+++++...---+.......++++
T Consensus 159 ~~~v~VvG~G~~---g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~ 206 (333)
T 1vdc_A 159 NKPLAVIGGGDS---AMEEANFLTKYGSKVYIIHRRDAFRASKIMQQRALS 206 (333)
T ss_dssp TSEEEEECCSHH---HHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHT
T ss_pred CCeEEEECCChH---HHHHHHHHHhcCCeEEEEecCCcCCccHHHHHHHHh
Confidence 578999987754 445667787778999998765422333333335544
No 387
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=21.35 E-value=1.3e+02 Score=23.53 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=26.8
Q ss_pred cCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 74 VTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 74 ~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|..+.||++|.+...+ ++.|+..|.++.+++..
T Consensus 158 l~g~tvGIIGlG~IG~~v---A~~l~~~G~~V~~~d~~ 192 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLV---AGYGRAFGMNVLVWGRE 192 (352)
T ss_dssp CTTCEEEEECCSHHHHHH---HHHHHHTTCEEEEECSH
T ss_pred CCCCEEEEEeECHHHHHH---HHHHHhCCCEEEEECCC
Confidence 457899999999998765 44566668888888754
No 388
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=21.35 E-value=1.3e+02 Score=23.37 Aligned_cols=27 Identities=15% Similarity=0.144 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhCCCcEEEEEec-cccCC
Q psy7291 90 TALDAAKILAGQGIDAEVINLR-SLRPL 116 (158)
Q Consensus 90 ~a~ea~~~L~~~gi~~~vi~~~-~l~Pl 116 (158)
.....++.+...|..|.+|.=+ .+.|+
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~sl~p~ 94 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARSAFPY 94 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTSCCTT
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCcCcc
Confidence 3344456666779999998753 45664
No 389
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=21.28 E-value=2.7e+02 Score=21.05 Aligned_cols=78 Identities=10% Similarity=0.041 Sum_probs=44.7
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHH----HHhCC-CeEEEEeCCcCCC-ChHHHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRPLDIETITK----SVMKT-NYLISVEGGWPQC-GIGSEIS 148 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~----~~~~~-~~vvvvEe~~~~G-G~g~~i~ 148 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++..+.+.+.+.+ +++.. -.|+...--...| .+..+..
T Consensus 83 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 162 (304)
T 3l21_A 83 DRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTI 162 (304)
T ss_dssp TTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHH
Confidence 44466777774 5677777777777778887777666655556655433 33332 3566665322222 3444555
Q ss_pred HHHHc
Q psy7291 149 ARIME 153 (158)
Q Consensus 149 ~~l~~ 153 (158)
..|++
T Consensus 163 ~~La~ 167 (304)
T 3l21_A 163 RALAS 167 (304)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 55554
No 390
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=21.28 E-value=61 Score=26.47 Aligned_cols=56 Identities=18% Similarity=0.316 Sum_probs=36.1
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCC-------CHHHHHHHHhCCCeEEE
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPL-------DIETITKSVMKTNYLIS 133 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pl-------d~~~l~~~~~~~~~vvv 133 (158)
.|..++|+++|.+...+ ++.|+..|.++.+++....+.. ....+.++++..+-|++
T Consensus 210 ~GktVgIiG~G~IG~~v---A~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil 272 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGC---AAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT 272 (436)
T ss_dssp TTCEEEEECCSHHHHHH---HHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE
T ss_pred cCCEEEEEeeCHHHHHH---HHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE
Confidence 47889999999986654 4556666888877776432211 11136677777765554
No 391
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=21.21 E-value=1.4e+02 Score=22.26 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=8.4
Q ss_pred CCHHHHHHHHhC-CCeEEEEe
Q psy7291 116 LDIETITKSVMK-TNYLISVE 135 (158)
Q Consensus 116 ld~~~l~~~~~~-~~~vvvvE 135 (158)
+|.+.+.+.++. ..++++++
T Consensus 114 ~d~~~l~~~i~~~~~~~v~~~ 134 (384)
T 3zrp_A 114 VKPGEVEEEVRKSEYKLVALT 134 (384)
T ss_dssp CCHHHHHHHHHHSCEEEEEEE
T ss_pred CCHHHHHHHHHhCCCcEEEEe
Confidence 444444444443 22344444
No 392
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=21.20 E-value=1.1e+02 Score=23.29 Aligned_cols=40 Identities=8% Similarity=0.149 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhCCC-cEEEEEeccccCCCHHHHHHHHhCCCeEEE
Q psy7291 90 TALDAAKILAGQGI-DAEVINLRSLRPLDIETITKSVMKTNYLIS 133 (158)
Q Consensus 90 ~a~ea~~~L~~~gi-~~~vi~~~~l~Pld~~~l~~~~~~~~~vvv 133 (158)
.....++.|.++|. ++..++.. .|.+.+.+++++.+.|+-
T Consensus 12 iG~~l~~~L~~~g~~~v~~~d~~----~d~~~l~~~~~~~d~Vih 52 (369)
T 3st7_A 12 VGKNLKADLTSTTDHHIFEVHRQ----TKEEELESALLKADFIVH 52 (369)
T ss_dssp HHHHHHHHHHHHCCCEEEECCTT----CCHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCC----CCHHHHHHHhccCCEEEE
Confidence 33344556666665 55554443 577788888877766553
No 393
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=21.17 E-value=1.2e+02 Score=20.59 Aligned_cols=58 Identities=9% Similarity=0.053 Sum_probs=34.2
Q ss_pred EEEEechhHHHHHHHHHHHHhC---CCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCChH
Q psy7291 80 TIVGHSKAVETALDAAKILAGQ---GIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGIG 144 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~~~L~~~---gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~g 144 (158)
++|.|||......++++.+.+. ++.+.++++.. .+. . -+..++.|++.=-.+-.|.+-
T Consensus 3 ilI~Y~S~tGnT~~iA~~ia~~l~~~~~v~~~~~~~---~~~---~-~l~~~d~iilg~pt~~~G~~p 63 (179)
T 1yob_A 3 IGLFFGSNTGKTRKVAKSIKKRFDDETMSDALNVNR---VSA---E-DFAQYQFLILGTPTLGEGELP 63 (179)
T ss_dssp EEEEECCSSSHHHHHHHHHHTTSCTTTBCCCEEGGG---CCH---H-HHHTCSEEEEEEECBTTTBCS
T ss_pred EEEEEECCCcHHHHHHHHHHHHhCCCCceEEEEhhh---CCH---H-HHhcCCEEEEEeccCCCCcCC
Confidence 4566888888888888877653 22355665543 222 2 244677777766555335333
No 394
>1y51_A Phosphocarrier protein HPR; bacillus stearothermophilus HPR F29W mutant, transport protein; 1.65A {Geobacillus stearothermophilus} PDB: 1y50_A 1y4y_A 2nzu_L* 1rzr_T* 2nzv_L* 2oen_L* 2fep_S* 3oqm_S* 3oqn_S* 3oqo_S*
Probab=21.16 E-value=1.2e+02 Score=18.51 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=21.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAG 100 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~ 100 (158)
|..+.|.+.|.....|++++..|-+
T Consensus 58 g~~i~i~~~G~De~~A~~~l~~l~~ 82 (88)
T 1y51_A 58 GATIKITAEGADAAEAMAALTDTLA 82 (88)
T ss_dssp TCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 7789999999999999988877654
No 395
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=21.13 E-value=84 Score=24.04 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=24.0
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..|++||+-|...-. ++..|.+.|+++.|++-.
T Consensus 11 ~~dVvIVGaG~aGl~---~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 11 TRRAEVAGGGFAGLT---AAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp CCEEEEECCSHHHHH---HHHHHHHTTCEEEEECSS
T ss_pred CCeEEEECCCHHHHH---HHHHHHHCCCCEEEEecC
Confidence 458999998875433 344577789999999754
No 396
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=21.05 E-value=44 Score=28.35 Aligned_cols=33 Identities=21% Similarity=0.109 Sum_probs=23.7
Q ss_pred EEEEechhHHHHHHHHHHHH----hCCCcEEEEEecc
Q psy7291 80 TIVGHSKAVETALDAAKILA----GQGIDAEVINLRS 112 (158)
Q Consensus 80 ~ii~~G~~~~~a~ea~~~L~----~~gi~~~vi~~~~ 112 (158)
++|.|||+++.+.+.++.|. +.|+++.++++..
T Consensus 21 i~I~YgS~tGnte~~A~~la~~l~~~g~~~~v~~~~~ 57 (618)
T 3qe2_A 21 IIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEE 57 (618)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHGGGGTCCEEEECGGG
T ss_pred EEEEEECChhHHHHHHHHHHHHHHhCCCceEEechHH
Confidence 55779998888877776654 4588888776654
No 397
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.03 E-value=2.6e+02 Score=20.77 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=36.5
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCc-EEEEEeccccCCCHHH----HHHHHhCC-CeEEEEeCCcC---CCChHHHHH
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGID-AEVINLRSLRPLDIET----ITKSVMKT-NYLISVEGGWP---QCGIGSEIS 148 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~-~~vi~~~~l~Pld~~~----l~~~~~~~-~~vvvvEe~~~---~GG~g~~i~ 148 (158)
+++.++.|+.- +.++++.+-..|.+ +-+++-+.+..++... |.+++++. ..+|++=.... .+.++..++
T Consensus 58 ~V~av~~G~~~--~~~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA 135 (264)
T 1o97_C 58 EVVVVSVGPDR--VDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVA 135 (264)
T ss_dssp EEEEEEESCGG--GHHHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHH
T ss_pred eEEEEEeCchh--HHHHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHH
Confidence 78888888631 22333333334654 4444444444455543 44444431 23444433332 244777777
Q ss_pred HHHH
Q psy7291 149 ARIM 152 (158)
Q Consensus 149 ~~l~ 152 (158)
+.|.
T Consensus 136 ~~L~ 139 (264)
T 1o97_C 136 SYLN 139 (264)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 7763
No 398
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=21.01 E-value=90 Score=23.45 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=23.2
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCC-cEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGI-DAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi-~~~vi~~~ 111 (158)
.+++||+-|...-. ++..|.+.|. ++.|++-.
T Consensus 5 ~~vvIIGaG~aGl~---aA~~l~~~g~~~v~lie~~ 37 (369)
T 3d1c_A 5 HKVAIIGAGAAGIG---MAITLKDFGITDVIILEKG 37 (369)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCCEEEECSS
T ss_pred CcEEEECcCHHHHH---HHHHHHHcCCCcEEEEecC
Confidence 47999998875433 4455667788 89999765
No 399
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=20.96 E-value=2.8e+02 Score=21.04 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=31.8
Q ss_pred EEEEEechhHHHHHHHHHHHHhCCCcEEEEEecc------------ccCCCHHHHHHHHhCCCeEE
Q psy7291 79 ITIVGHSKAVETALDAAKILAGQGIDAEVINLRS------------LRPLDIETITKSVMKTNYLI 132 (158)
Q Consensus 79 ~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~------------l~Pld~~~l~~~~~~~~~vv 132 (158)
++|++.|...... +..+++.|+++-+++... ..+.|.+.+.+++.+.+.|+
T Consensus 2 iliiG~g~~g~~~---~~a~~~~G~~v~~~~~~~~~~~~~~a~~~~~~~~d~~~l~~~~~~~d~v~ 64 (369)
T 3aw8_A 2 IGILGGGQLGRML---ALAGYPLGLSFRFLDPSPEACAGQVGELVVGEFLDEGALLRFAEGLALVT 64 (369)
T ss_dssp EEEECCSHHHHHH---HHHHTTBTCCEEEEESCTTCGGGGTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEECCCHHHHHH---HHHHHHcCCEEEEEeCCCCChHHHhhceEecCCCCHHHHHHHHhCCCEEE
Confidence 6788777544443 444667788888877541 13356677778775555444
No 400
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=20.94 E-value=1.1e+02 Score=24.86 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=36.1
Q ss_pred CcEEEEEechh-HHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHh-CCCeEEEEeC
Q psy7291 77 KDITIVGHSKA-VETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVM-KTNYLISVEG 136 (158)
Q Consensus 77 ~~~~ii~~G~~-~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~-~~~~vvvvEe 136 (158)
.++.|+++|.. ...+++.++.|++.|+.+.+..-. ..+ .+.++..-+ +.+.++++-+
T Consensus 362 ~~v~v~~~~~~~~~~a~~la~~LR~~Gi~ve~~~~~--~sl-kkq~k~A~k~ga~~vviiGe 420 (456)
T 3lc0_A 362 VDDVVIPFDESMRPHALAVLRRLRDAGRSADIILDK--KKV-VQAFNYADRVGAVRAVLVAP 420 (456)
T ss_dssp EEEEEEESSGGGHHHHHHHHHHHHHTTCCEEECCSC--CCH-HHHHHHHHHTTEEEEEEECH
T ss_pred CcEEEEEcCHHHHHHHHHHHHHHHHCCCeEEEecCC--CCH-HHHHHHHHHcCCCEEEEECC
Confidence 47889999964 468899999999999988664211 122 223333332 3456666655
No 401
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=20.92 E-value=90 Score=24.89 Aligned_cols=56 Identities=20% Similarity=0.192 Sum_probs=34.8
Q ss_pred CCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEecccc---CCCHHHHHHHHhCCCeEEE
Q psy7291 75 TGKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLR---PLDIETITKSVMKTNYLIS 133 (158)
Q Consensus 75 ~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~---Pld~~~l~~~~~~~~~vvv 133 (158)
.|..+.||++|.+...+ ++.|+.-|.++.+++...-. ......+.++++..+-|++
T Consensus 118 ~gktvGIIGlG~IG~~v---A~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l 176 (381)
T 3oet_A 118 RDRTIGIVGVGNVGSRL---QTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTF 176 (381)
T ss_dssp GGCEEEEECCSHHHHHH---HHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEE
T ss_pred CCCEEEEEeECHHHHHH---HHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEE
Confidence 37889999999998775 44556668888888753210 0111235666666654443
No 402
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=20.87 E-value=2.5e+02 Score=20.53 Aligned_cols=51 Identities=12% Similarity=0.013 Sum_probs=32.7
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEe
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRPLDIETITKSVMKTNYLISVE 135 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvE 135 (158)
+.+|| ||.....-...++.|.++|.++-+.+. +++.+.++.+....+..+.
T Consensus 3 K~vlV-TGas~GIG~aia~~la~~Ga~V~~~~~------~~~~~~~~~~~~~~~~~~~ 53 (247)
T 3ged_A 3 RGVIV-TGGGHGIGKQICLDFLEAGDKVCFIDI------DEKRSADFAKERPNLFYFH 53 (247)
T ss_dssp CEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEES------CHHHHHHHHTTCTTEEEEE
T ss_pred CEEEE-ecCCCHHHHHHHHHHHHCCCEEEEEeC------CHHHHHHHHHhcCCEEEEE
Confidence 35555 455556666678888888988777664 4566666666555555554
No 403
>1cvr_A Gingipain R, RGPB; caspases, cysteine proteinase, hydrolase-hydrolase inhibitor; HET: H37; 2.00A {Porphyromonas gingivalis} SCOP: b.1.18.12 c.17.1.2
Probab=20.83 E-value=1.3e+02 Score=24.42 Aligned_cols=51 Identities=14% Similarity=0.131 Sum_probs=38.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHHHHHHHHh
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLRSLRP-LDIETITKSVM 126 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~~l~~~~~ 126 (158)
..|.+||+.-.....+.+-++--+.+|+++.|+++..|.= -|...|+++++
T Consensus 9 ~~dylIIt~~~l~~~a~~la~~r~~~G~~v~vv~~~~Iyn~~d~~aIR~fik 60 (435)
T 1cvr_A 9 NGRMIVIVAKKYEGDIKDFVDWKNQRGLRTEVKVAEDIASPVTANAIQQFVK 60 (435)
T ss_dssp TCEEEEEECGGGGGGCHHHHHHHHHTTCEEEEEEHHHHCSSCCHHHHHHHHH
T ss_pred CCCEEEEECHHHHHHHHHHHHHHHhCCCeEEEEEHHHhhccCCHHHHHHHHH
Confidence 6799999998777766665554457799999999988743 56677888776
No 404
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=20.69 E-value=1.8e+02 Score=22.62 Aligned_cols=78 Identities=13% Similarity=0.006 Sum_probs=48.6
Q ss_pred CCcEEEEEech-hHHHHHHHHHHHHhCCCcEEEEEeccccC-CCHHHHH----HHHh-CC-CeEEEEeCCcCCC-ChHHH
Q psy7291 76 GKDITIVGHSK-AVETALDAAKILAGQGIDAEVINLRSLRP-LDIETIT----KSVM-KT-NYLISVEGGWPQC-GIGSE 146 (158)
Q Consensus 76 g~~~~ii~~G~-~~~~a~ea~~~L~~~gi~~~vi~~~~l~P-ld~~~l~----~~~~-~~-~~vvvvEe~~~~G-G~g~~ 146 (158)
|+--+|+++|+ .+..+.+-++..++.|.+.-++-.++.++ .+.+.+. .+++ .. -.|++..-- ..| -+..+
T Consensus 91 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~tg~~l~~e 169 (344)
T 2hmc_A 91 AGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-YYGFATRAD 169 (344)
T ss_dssp TTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-GGTBCCCHH
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-ccCCCcCHH
Confidence 44457788886 55777777777777788877776666655 5665543 3444 33 357777755 444 35555
Q ss_pred HHHHH-HcC
Q psy7291 147 ISARI-MEI 154 (158)
Q Consensus 147 i~~~l-~~~ 154 (158)
....| ++.
T Consensus 170 ~~~~L~a~~ 178 (344)
T 2hmc_A 170 LFFALRAEH 178 (344)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 55555 543
No 405
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=20.65 E-value=56 Score=25.75 Aligned_cols=31 Identities=19% Similarity=0.395 Sum_probs=24.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEE
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
.+.++|++.|.....+.+++++| |+++.+++
T Consensus 5 ~k~l~Il~~~~~~~~i~~aa~~l---G~~vv~v~ 35 (425)
T 3vot_A 5 NKNLAIICQNKHLPFIFEEAERL---GLKVTFFY 35 (425)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHT---TCEEEEEE
T ss_pred CcEEEEECCChhHHHHHHHHHHC---CCEEEEEE
Confidence 56799999898888887777665 88887774
No 406
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=20.62 E-value=1.2e+02 Score=23.36 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=19.7
Q ss_pred cEEEEEechh--HHHHHHHHHHHHhCCCcEEEEE
Q psy7291 78 DITIVGHSKA--VETALDAAKILAGQGIDAEVIN 109 (158)
Q Consensus 78 ~~~ii~~G~~--~~~a~ea~~~L~~~gi~~~vi~ 109 (158)
+++|.+-|+. +..++..++.|+++|.++.++.
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg 37 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLG 37 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 4554443332 2336677888988888877663
No 407
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=20.60 E-value=72 Score=21.17 Aligned_cols=30 Identities=7% Similarity=-0.020 Sum_probs=25.3
Q ss_pred CCCeEEEEeCCcCCCChHHHHHHHHHcCCC
Q psy7291 127 KTNYLISVEGGWPQCGIGSEISARIMEIPY 156 (158)
Q Consensus 127 ~~~~vvvvEe~~~~GG~g~~i~~~l~~~~~ 156 (158)
+.++|++||+-.-+|+--..+++.|.+.|.
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga 111 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGA 111 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTB
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCC
Confidence 457899999999888888888888888764
No 408
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=20.58 E-value=1.2e+02 Score=23.19 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=26.4
Q ss_pred ccCCCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEe
Q psy7291 73 RVTGKDITIVGHSKAVETALDAAKILAGQGIDAEVINL 110 (158)
Q Consensus 73 ~~~g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~ 110 (158)
...|..+.||++|.+.... ++.|+..|.++.+++.
T Consensus 143 ~l~g~~vgIIG~G~IG~~~---A~~l~~~G~~V~~~d~ 177 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQAL---AKRAQGFDMDIDYFDT 177 (320)
T ss_dssp CCTTCEEEEECCSHHHHHH---HHHHHTTTCEEEEECS
T ss_pred CCCCCEEEEECcCHHHHHH---HHHHHHCCCEEEEECC
Confidence 3557899999999998875 3455566888877775
No 409
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=20.53 E-value=33 Score=24.84 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=17.0
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEecc
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLRS 112 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~~ 112 (158)
......+.+|++.|+++|+.+-+..=++
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs 48 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNS 48 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCC
Confidence 3444556667777777777666664433
No 410
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=20.48 E-value=72 Score=23.47 Aligned_cols=76 Identities=12% Similarity=0.191 Sum_probs=41.8
Q ss_pred CCcEEEEEechh--HHHHHHHHHHHHhCCCcEEEEE---------------e------ccccCC--CHHHHHHHHhCCCe
Q psy7291 76 GKDITIVGHSKA--VETALDAAKILAGQGIDAEVIN---------------L------RSLRPL--DIETITKSVMKTNY 130 (158)
Q Consensus 76 g~~~~ii~~G~~--~~~a~ea~~~L~~~gi~~~vi~---------------~------~~l~Pl--d~~~l~~~~~~~~~ 130 (158)
|.++++++.|-. +....+.++.+.+.|+++.+|- + .++-|- +.+.+.+.++....
T Consensus 96 g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~G~pl~~~~~~~~~~~~~~~~~~l~~~~~~~~t 175 (259)
T 2e0n_A 96 GRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAGSAAGMPLALQSDSVLVLAQIDEIGELERALVTHST 175 (259)
T ss_dssp TCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHHHHTTCCSBCTTCCEEEECSCSSTHHHHHHHTTCSE
T ss_pred CCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHHHhcCCCCcCCCceEEEEcCCCCHHHHHHHhhcCCE
Confidence 788999998842 2444445566666677666650 0 000111 13456677766667
Q ss_pred EEEEeCCcCCCChHHHHHHHHHcCC
Q psy7291 131 LISVEGGWPQCGIGSEISARIMEIP 155 (158)
Q Consensus 131 vvvvEe~~~~GG~g~~i~~~l~~~~ 155 (158)
+++.+.... + ..+++.|.+.|
T Consensus 176 ~vl~~~~~~---~-~~i~~~L~~~g 196 (259)
T 2e0n_A 176 VVVMKLSTV---R-DELVSFLERYA 196 (259)
T ss_dssp EEECCTTSS---G-GGHHHHHHHHC
T ss_pred EEEEccccc---H-HHHHHHHHhCC
Confidence 777775542 2 34444554444
No 411
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=20.45 E-value=77 Score=25.15 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=24.8
Q ss_pred CCcEEEEEechhH-----HHHHHHHHHHHhCCCcEEEE
Q psy7291 76 GKDITIVGHSKAV-----ETALDAAKILAGQGIDAEVI 108 (158)
Q Consensus 76 g~~~~ii~~G~~~-----~~a~ea~~~L~~~gi~~~vi 108 (158)
|..+.|||..+.. .....+++.|++.|.++.+-
T Consensus 43 GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~ 80 (371)
T 3tla_A 43 GDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSG 80 (371)
T ss_dssp TCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEC
Confidence 8899999987644 34556788899888876543
No 412
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=20.41 E-value=2.8e+02 Score=20.80 Aligned_cols=55 Identities=9% Similarity=0.062 Sum_probs=26.7
Q ss_pred CCCcEEEEEeccccCCCHHHHHHHHhC-CCeEEEEeCC-cCCCChH--HHHHHHHHcCC
Q psy7291 101 QGIDAEVINLRSLRPLDIETITKSVMK-TNYLISVEGG-WPQCGIG--SEISARIMEIP 155 (158)
Q Consensus 101 ~gi~~~vi~~~~l~Pld~~~l~~~~~~-~~~vvvvEe~-~~~GG~g--~~i~~~l~~~~ 155 (158)
.|.++..+.+..=..+|.+.+.+.++. ..++++++.. ++.|..- ..|.+...++|
T Consensus 131 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 189 (393)
T 1vjo_A 131 YGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFG 189 (393)
T ss_dssp TTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHT
T ss_pred cCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcC
Confidence 455555444432223666777666654 3345666653 3344322 34454444433
No 413
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=20.41 E-value=2.8e+02 Score=20.93 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=30.6
Q ss_pred cEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec-------------cccCC-CHHHHHHHHhCCCeEE
Q psy7291 78 DITIVGHSKAVETALDAAKILAGQGIDAEVINLR-------------SLRPL-DIETITKSVMKTNYLI 132 (158)
Q Consensus 78 ~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~-------------~l~Pl-d~~~l~~~~~~~~~vv 132 (158)
.++|++-|.... +++..+++.|+++-+++.. ++-+. |.+.+..+.++.+.|+
T Consensus 3 ~I~ilGgg~~g~---~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~ 68 (363)
T 4ffl_A 3 TICLVGGKLQGF---EAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLLELSKRVDAVL 68 (363)
T ss_dssp EEEEECCSHHHH---HHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEE
T ss_pred EEEEECCCHHHH---HHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEE
Confidence 578887665443 3444556669998888742 22333 3445666666665444
No 414
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=20.34 E-value=1.1e+02 Score=23.70 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=23.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCc-EEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGID-AEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~-~~vi~~~ 111 (158)
..|++||+-|...-. ++-.|.+.|++ +.|+.-.
T Consensus 4 ~~dVvIVGaG~aGl~---~A~~L~~~G~~~v~v~E~~ 37 (410)
T 3c96_A 4 PIDILIAGAGIGGLS---CALALHQAGIGKVTLLESS 37 (410)
T ss_dssp CCEEEEECCSHHHHH---HHHHHHHTTCSEEEEEESS
T ss_pred CCeEEEECCCHHHHH---HHHHHHhCCCCeEEEEECC
Confidence 358999998875433 34457778999 9999854
No 415
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.28 E-value=1.1e+02 Score=24.12 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=24.2
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 77 KDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 77 ~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
.|++||+-|..... |+..|.+.|.++.+|+-.
T Consensus 4 ~dvvIIGgG~aGl~---aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYV---AAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHH---HHHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHH---HHHHHHhCCCeEEEEECC
Confidence 57999999975443 345566679999999865
No 416
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=20.11 E-value=3e+02 Score=23.58 Aligned_cols=71 Identities=13% Similarity=0.173 Sum_probs=43.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHh---CCCcEEEEEeccccCCCHHHHHHHHhCCCeEEEEeCCcCCCCh---HHHHHH
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAG---QGIDAEVINLRSLRPLDIETITKSVMKTNYLISVEGGWPQCGI---GSEISA 149 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~---~gi~~~vi~~~~l~Pld~~~l~~~~~~~~~vvvvEe~~~~GG~---g~~i~~ 149 (158)
+..-+.|-||++++.+.+.++.|.+ .|+++.++++.-..+ .. +...+.++++=-.+-.|.. +..+..
T Consensus 10 ~~~k~~IlY~S~TG~te~~A~~l~~~l~~~~~~~v~~m~~~d~---~~----l~~~~~vl~vtsT~G~Gdpp~n~~~F~~ 82 (688)
T 1tll_A 10 KRVKATILYATETGKSQAYAKTLCEIFKHAFDAKAMSMEEYDI---VH----LEHEALVLVVTSTFGNGDPPENGEKFGC 82 (688)
T ss_dssp CSCEEEEEEECSSSHHHHHHHHHHHHHTTTSEEEEEETTTSCT---TS----GGGCSEEEEEECCBTTTBCCGGGHHHHH
T ss_pred CCCeEEEEEECCchHHHHHHHHHHHHHhcCCCcEEeecccCCh---hH----hccCceEEEEEcccCCCcCCHHHHHHHH
Confidence 3445677899999887777765543 477888887765322 22 2345677777666645554 345555
Q ss_pred HHHc
Q psy7291 150 RIME 153 (158)
Q Consensus 150 ~l~~ 153 (158)
.|.+
T Consensus 83 ~L~~ 86 (688)
T 1tll_A 83 ALME 86 (688)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 417
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=20.10 E-value=90 Score=24.08 Aligned_cols=33 Identities=33% Similarity=0.404 Sum_probs=23.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
..+++||+-|...-. ++..|.+.|+++.|+.-.
T Consensus 5 ~~~V~IVGaG~aGl~---~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 5 TDRIAVVGGSISGLT---AALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CSEEEEECCSHHHHH---HHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECCCHHHHH---HHHHHHhCCCCEEEEecC
Confidence 458999998865433 344577789999999754
No 418
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.08 E-value=1.7e+02 Score=18.16 Aligned_cols=36 Identities=11% Similarity=0.218 Sum_probs=29.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 76 GKDITIVGHSKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 76 g~~~~ii~~G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
|...+++-.|..-+.+-|-..+.+++|.+.+|+.-.
T Consensus 51 gkplvvfvngasqndvnefqneakkegvsydvlkst 86 (112)
T 2lnd_A 51 GKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKST 86 (112)
T ss_dssp CSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCeEEEEecCcccccHHHHHHHHHhcCcchhhhccC
Confidence 777888888988888888888888889998887543
No 419
>4got_A Methionine-binding lipoprotein METQ; NLPA lipoprotein, PF03180 family, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.95A {Bacillus subtilis subsp}
Probab=20.05 E-value=84 Score=23.57 Aligned_cols=27 Identities=22% Similarity=0.252 Sum_probs=19.1
Q ss_pred chhHHHHHHHHHHHHhCCCcEEEEEec
Q psy7291 85 SKAVETALDAAKILAGQGIDAEVINLR 111 (158)
Q Consensus 85 G~~~~~a~ea~~~L~~~gi~~~vi~~~ 111 (158)
|+.......+.+.|+++|+++.++.+.
T Consensus 15 ~P~aeil~~vk~~l~k~Gi~leiv~F~ 41 (249)
T 4got_A 15 TPHAEILKEAEPLLKEKGYTLKVKVLS 41 (249)
T ss_dssp TTHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred CCHHHHHHHHHHHHHhcCCeEEEEEeC
Confidence 445555444566889999999998654
Done!