Query psy7300
Match_columns 986
No_of_seqs 551 out of 3534
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 23:18:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cmm_A Ubiquitin-activating en 100.0 4E-202 1E-206 1871.3 82.2 920 51-985 3-950 (1015)
2 1y8q_B Anthracycline-, ubiquit 100.0 2E-95 7E-100 866.3 23.6 461 448-985 3-482 (640)
3 1z7l_A Ubiquitin-activating en 100.0 9.5E-72 3.3E-76 603.0 23.2 267 619-885 10-276 (276)
4 1tt5_A APPBP1, amyloid protein 100.0 4.9E-64 1.7E-68 593.6 12.4 377 52-429 8-525 (531)
5 1y8q_A Ubiquitin-like 1 activa 100.0 6.8E-59 2.3E-63 524.9 24.7 313 52-429 13-337 (346)
6 1tt5_B Ubiquitin-activating en 100.0 1.5E-52 5.1E-57 483.7 20.3 323 453-985 30-375 (434)
7 2nvu_B Maltose binding protein 100.0 1.2E-48 4.2E-53 489.1 27.3 333 443-985 391-746 (805)
8 1tt5_A APPBP1, amyloid protein 100.0 9E-36 3.1E-40 352.3 11.9 189 443-641 13-201 (531)
9 3h8v_A Ubiquitin-like modifier 100.0 5.5E-35 1.9E-39 320.1 16.1 165 443-616 14-194 (292)
10 1zud_1 Adenylyltransferase THI 100.0 2.5E-34 8.4E-39 310.9 13.6 164 443-615 7-173 (251)
11 1y8q_A Ubiquitin-like 1 activa 100.0 4.7E-34 1.6E-38 322.2 15.2 164 443-617 17-180 (346)
12 1zud_1 Adenylyltransferase THI 100.0 2.1E-32 7.2E-37 295.8 18.4 150 54-203 5-160 (251)
13 1jw9_B Molybdopterin biosynthe 100.0 5.2E-33 1.8E-37 300.3 13.6 164 443-615 10-176 (249)
14 1tt5_B Ubiquitin-activating en 100.0 4.8E-32 1.6E-36 312.8 21.0 271 65-429 29-322 (434)
15 3h5n_A MCCB protein; ubiquitin 100.0 8.3E-32 2.8E-36 304.6 18.9 165 443-616 93-265 (353)
16 2nvu_B Maltose binding protein 100.0 4.2E-30 1.4E-34 321.5 23.9 275 62-429 397-693 (805)
17 3rui_A Ubiquitin-like modifier 100.0 6.4E-31 2.2E-35 292.2 14.3 160 449-615 21-199 (340)
18 3cmm_A Ubiquitin-activating en 100.0 5.1E-31 1.7E-35 330.0 13.3 183 443-643 8-193 (1015)
19 3vh1_A Ubiquitin-like modifier 100.0 7.3E-30 2.5E-34 300.4 14.5 166 443-615 301-492 (598)
20 4gsl_A Ubiquitin-like modifier 100.0 2.2E-29 7.6E-34 296.2 14.7 160 450-615 314-491 (615)
21 3h8v_A Ubiquitin-like modifier 100.0 5.2E-29 1.8E-33 272.8 15.3 148 57-205 15-183 (292)
22 1jw9_B Molybdopterin biosynthe 100.0 3.5E-28 1.2E-32 262.5 17.2 149 55-203 9-163 (249)
23 1y8q_B Anthracycline-, ubiquit 99.9 1.1E-27 3.7E-32 285.4 18.3 152 61-212 3-162 (640)
24 3h5n_A MCCB protein; ubiquitin 99.9 1.2E-27 4.2E-32 270.5 14.3 150 53-202 90-250 (353)
25 3rui_A Ubiquitin-like modifier 99.9 1.6E-26 5.5E-31 256.8 14.2 155 50-205 9-182 (340)
26 4gsl_A Ubiquitin-like modifier 99.9 5.6E-26 1.9E-30 267.4 11.9 179 27-206 270-475 (615)
27 3vh1_A Ubiquitin-like modifier 99.9 1.1E-25 3.7E-30 265.1 12.8 177 27-204 271-474 (598)
28 2v31_A Ubiquitin-activating en 99.9 3E-24 1E-28 199.9 6.8 111 204-314 1-111 (112)
29 1z7l_A Ubiquitin-activating en 98.4 1.9E-06 6.5E-11 93.2 13.7 66 712-787 207-274 (276)
30 3dfz_A SIRC, precorrin-2 dehyd 97.4 0.00037 1.3E-08 73.2 9.1 98 72-196 28-125 (223)
31 3jyo_A Quinate/shikimate dehyd 97.1 0.0007 2.4E-08 73.8 8.2 80 72-170 124-203 (283)
32 3dfz_A SIRC, precorrin-2 dehyd 97.1 0.00067 2.3E-08 71.2 7.4 91 459-589 28-118 (223)
33 3ic5_A Putative saccharopine d 97.0 0.0015 5.1E-08 60.2 7.8 96 462-593 5-100 (118)
34 3jyo_A Quinate/shikimate dehyd 97.0 0.00082 2.8E-08 73.3 6.6 79 459-569 124-202 (283)
35 1kyq_A Met8P, siroheme biosynt 96.9 0.0039 1.3E-07 67.4 11.0 119 72-198 10-146 (274)
36 2g1u_A Hypothetical protein TM 96.8 0.0065 2.2E-07 59.5 11.2 101 458-592 15-116 (155)
37 3llv_A Exopolyphosphatase-rela 96.8 0.01 3.6E-07 56.8 12.1 98 460-592 4-101 (141)
38 1pjq_A CYSG, siroheme synthase 96.8 0.0066 2.3E-07 70.6 12.6 100 72-197 9-108 (457)
39 2g1u_A Hypothetical protein TM 96.8 0.011 3.8E-07 57.8 12.4 100 70-196 14-120 (155)
40 3llv_A Exopolyphosphatase-rela 96.7 0.013 4.4E-07 56.2 12.2 94 73-194 4-103 (141)
41 2hmt_A YUAA protein; RCK, KTN, 96.7 0.012 4.1E-07 55.9 11.7 98 71-196 2-106 (144)
42 3ic5_A Putative saccharopine d 96.6 0.011 3.7E-07 54.3 10.6 90 75-192 5-99 (118)
43 2hmt_A YUAA protein; RCK, KTN, 96.6 0.0066 2.3E-07 57.8 9.0 95 459-588 3-98 (144)
44 1kyq_A Met8P, siroheme biosynt 96.4 0.0072 2.5E-07 65.3 9.0 111 459-590 10-138 (274)
45 1lss_A TRK system potassium up 96.4 0.0076 2.6E-07 57.2 8.2 90 463-586 5-94 (140)
46 1id1_A Putative potassium chan 96.3 0.0096 3.3E-07 58.1 8.2 99 73-195 1-106 (153)
47 3e8x_A Putative NAD-dependent 96.2 0.014 4.9E-07 60.8 9.9 101 456-594 15-131 (236)
48 3tnl_A Shikimate dehydrogenase 96.1 0.01 3.6E-07 65.4 8.7 83 460-569 152-234 (315)
49 1id1_A Putative potassium chan 96.1 0.029 1E-06 54.6 11.1 94 461-585 2-95 (153)
50 4ina_A Saccharopine dehydrogen 96.1 0.012 4.3E-07 67.2 9.5 103 463-592 2-106 (405)
51 1pjq_A CYSG, siroheme synthase 96.1 0.017 5.7E-07 67.2 10.7 92 459-589 9-100 (457)
52 3t4e_A Quinate/shikimate dehyd 96.1 0.011 3.9E-07 65.1 8.7 81 73-170 146-229 (312)
53 3tum_A Shikimate dehydrogenase 96.1 0.011 3.7E-07 63.8 8.2 73 460-569 123-195 (269)
54 3tum_A Shikimate dehydrogenase 96.0 0.015 5.1E-07 62.8 9.0 74 73-170 123-196 (269)
55 3tnl_A Shikimate dehydrogenase 96.0 0.014 4.9E-07 64.3 9.1 81 73-170 152-235 (315)
56 3abi_A Putative uncharacterize 96.0 0.017 5.7E-07 65.1 9.8 94 461-593 15-108 (365)
57 3t4e_A Quinate/shikimate dehyd 95.9 0.017 5.7E-07 63.7 8.7 84 460-570 146-229 (312)
58 3l4b_C TRKA K+ channel protien 95.8 0.021 7.1E-07 59.2 8.8 92 463-588 1-93 (218)
59 2ph5_A Homospermidine synthase 95.8 0.01 3.6E-07 68.5 6.9 103 461-595 12-116 (480)
60 1lss_A TRK system potassium up 95.8 0.03 1E-06 52.9 9.0 86 76-188 5-96 (140)
61 3pwz_A Shikimate dehydrogenase 95.5 0.027 9.1E-07 60.9 8.5 73 73-170 118-190 (272)
62 3c85_A Putative glutathione-re 95.5 0.067 2.3E-06 53.5 10.8 91 460-586 37-130 (183)
63 3c85_A Putative glutathione-re 95.5 0.042 1.4E-06 55.1 9.2 92 73-192 37-137 (183)
64 2z2v_A Hypothetical protein PH 95.3 0.044 1.5E-06 61.7 9.6 94 461-593 15-108 (365)
65 3o8q_A Shikimate 5-dehydrogena 95.3 0.039 1.3E-06 59.9 8.8 74 73-171 124-197 (281)
66 3oj0_A Glutr, glutamyl-tRNA re 95.3 0.021 7.2E-07 55.1 6.0 75 71-172 17-91 (144)
67 3pwz_A Shikimate dehydrogenase 95.3 0.021 7.1E-07 61.7 6.5 73 460-570 118-190 (272)
68 3abi_A Putative uncharacterize 95.3 0.013 4.5E-07 65.9 5.2 94 74-193 15-108 (365)
69 3o8q_A Shikimate 5-dehydrogena 95.1 0.033 1.1E-06 60.5 7.5 74 460-571 124-197 (281)
70 3gpi_A NAD-dependent epimerase 95.1 0.066 2.2E-06 57.4 9.9 99 461-599 2-114 (286)
71 3dqp_A Oxidoreductase YLBE; al 95.0 0.11 3.8E-06 53.3 11.1 95 464-595 2-107 (219)
72 3fwz_A Inner membrane protein 95.0 0.11 3.6E-06 49.9 10.1 83 75-185 7-95 (140)
73 3fwz_A Inner membrane protein 95.0 0.059 2E-06 51.7 8.3 89 462-585 7-95 (140)
74 3ruf_A WBGU; rossmann fold, UD 95.0 0.1 3.5E-06 57.6 11.4 114 458-599 21-156 (351)
75 1hdo_A Biliverdin IX beta redu 95.0 0.084 2.9E-06 53.1 9.8 100 462-597 3-114 (206)
76 3dhn_A NAD-dependent epimerase 95.0 0.071 2.4E-06 54.9 9.4 99 463-598 5-116 (227)
77 3slg_A PBGP3 protein; structur 94.9 0.037 1.3E-06 61.8 7.5 112 455-600 17-147 (372)
78 2egg_A AROE, shikimate 5-dehyd 94.9 0.028 9.4E-07 61.5 6.2 76 73-171 139-214 (297)
79 4ina_A Saccharopine dehydrogen 94.9 0.085 2.9E-06 60.2 10.5 96 76-192 2-106 (405)
80 3l4b_C TRKA K+ channel protien 94.9 0.055 1.9E-06 55.9 8.2 93 77-196 2-101 (218)
81 4id9_A Short-chain dehydrogena 94.8 0.057 1.9E-06 59.5 8.7 39 456-500 13-52 (347)
82 3oj0_A Glutr, glutamyl-tRNA re 94.8 0.027 9.1E-07 54.4 5.1 38 457-500 16-53 (144)
83 1y1p_A ARII, aldehyde reductas 94.6 0.17 5.9E-06 55.2 12.0 109 460-597 9-135 (342)
84 3gvi_A Malate dehydrogenase; N 94.6 0.067 2.3E-06 59.2 8.4 77 72-170 4-84 (324)
85 4g65_A TRK system potassium up 94.6 0.037 1.3E-06 64.3 6.6 97 462-592 3-100 (461)
86 2pzm_A Putative nucleotide sug 94.6 0.11 3.6E-06 57.1 10.0 37 458-500 16-53 (330)
87 2z2v_A Hypothetical protein PH 94.4 0.037 1.3E-06 62.4 5.9 91 74-193 15-108 (365)
88 3fbt_A Chorismate mutase and s 94.4 0.052 1.8E-06 58.9 6.8 106 73-190 120-234 (282)
89 3h2s_A Putative NADH-flavin re 94.4 0.048 1.6E-06 56.0 6.3 95 463-595 1-106 (224)
90 3e8x_A Putative NAD-dependent 94.3 0.11 3.8E-06 53.9 9.0 100 70-196 16-133 (236)
91 3qsg_A NAD-binding phosphogluc 94.2 0.15 5.1E-06 56.0 10.3 36 74-109 23-58 (312)
92 3don_A Shikimate dehydrogenase 94.2 0.046 1.6E-06 59.2 6.0 38 459-501 114-151 (277)
93 2axq_A Saccharopine dehydrogen 94.2 0.058 2E-06 62.8 7.2 99 459-593 20-119 (467)
94 3rku_A Oxidoreductase YMR226C; 94.2 0.16 5.4E-06 55.0 10.3 94 454-569 25-123 (287)
95 3t4x_A Oxidoreductase, short c 94.2 0.073 2.5E-06 56.8 7.5 83 460-569 8-93 (267)
96 2raf_A Putative dinucleotide-b 94.2 0.14 4.7E-06 52.8 9.2 36 459-500 16-51 (209)
97 3don_A Shikimate dehydrogenase 94.1 0.068 2.3E-06 57.8 7.1 109 72-190 114-230 (277)
98 4e12_A Diketoreductase; oxidor 94.1 0.051 1.7E-06 58.8 6.0 33 463-501 5-37 (283)
99 4egb_A DTDP-glucose 4,6-dehydr 94.1 0.11 3.9E-06 57.0 9.0 112 460-599 22-154 (346)
100 3ius_A Uncharacterized conserv 94.0 0.39 1.3E-05 51.1 12.9 97 462-599 5-108 (286)
101 2ph5_A Homospermidine synthase 94.0 0.18 6.1E-06 58.3 10.5 94 75-194 13-115 (480)
102 2b69_A UDP-glucuronate decarbo 93.9 0.32 1.1E-05 53.4 12.2 106 458-599 23-146 (343)
103 1npy_A Hypothetical shikimate 93.8 0.12 4.2E-06 55.6 8.3 67 74-170 118-184 (271)
104 1hdo_A Biliverdin IX beta redu 93.8 0.25 8.4E-06 49.6 10.2 97 75-199 3-116 (206)
105 3p7m_A Malate dehydrogenase; p 93.8 0.13 4.3E-06 56.9 8.5 75 73-169 3-81 (321)
106 2raf_A Putative dinucleotide-b 93.8 0.17 5.8E-06 52.1 9.1 36 72-108 16-51 (209)
107 3m2p_A UDP-N-acetylglucosamine 93.8 0.21 7.3E-06 54.0 10.3 98 462-599 2-114 (311)
108 3sxp_A ADP-L-glycero-D-mannohe 93.7 0.2 6.8E-06 55.6 10.2 118 460-600 8-144 (362)
109 2hk9_A Shikimate dehydrogenase 93.7 0.14 4.9E-06 55.1 8.6 70 73-171 127-196 (275)
110 1sb8_A WBPP; epimerase, 4-epim 93.7 0.17 5.9E-06 55.8 9.6 114 460-599 25-158 (352)
111 3tri_A Pyrroline-5-carboxylate 93.7 0.18 6.1E-06 54.5 9.4 95 74-196 2-100 (280)
112 3ruf_A WBGU; rossmann fold, UD 93.7 0.37 1.3E-05 52.9 12.2 108 72-199 22-156 (351)
113 1ff9_A Saccharopine reductase; 93.6 0.18 6E-06 58.4 9.8 34 461-500 2-35 (450)
114 2b69_A UDP-glucuronate decarbo 93.6 0.27 9.1E-06 54.1 10.9 105 72-199 24-146 (343)
115 3ko8_A NAD-dependent epimerase 93.6 0.24 8.2E-06 53.5 10.3 99 463-599 1-118 (312)
116 1iy8_A Levodione reductase; ox 93.5 0.17 5.7E-06 53.9 8.7 65 459-548 10-75 (267)
117 3r6d_A NAD-dependent epimerase 93.5 0.23 8E-06 50.8 9.6 100 463-596 6-110 (221)
118 3dhn_A NAD-dependent epimerase 93.5 0.42 1.4E-05 49.0 11.6 95 76-199 5-117 (227)
119 3tri_A Pyrroline-5-carboxylate 93.5 0.099 3.4E-06 56.5 6.9 98 461-597 2-101 (280)
120 3gpi_A NAD-dependent epimerase 93.5 0.14 4.8E-06 54.8 8.0 94 74-199 2-114 (286)
121 2aef_A Calcium-gated potassium 93.4 0.16 5.6E-06 52.9 8.3 92 74-195 8-106 (234)
122 2hk9_A Shikimate dehydrogenase 93.4 0.13 4.4E-06 55.4 7.7 35 460-500 127-161 (275)
123 3u62_A Shikimate dehydrogenase 93.4 0.14 4.7E-06 54.6 7.8 36 73-109 107-142 (253)
124 3gvi_A Malate dehydrogenase; N 93.4 0.17 5.9E-06 55.9 8.8 37 459-500 4-40 (324)
125 3d0o_A L-LDH 1, L-lactate dehy 93.4 0.22 7.5E-06 54.9 9.6 78 70-170 1-83 (317)
126 1xg5_A ARPG836; short chain de 93.4 0.21 7.1E-06 53.4 9.2 64 459-547 29-93 (279)
127 2bka_A CC3, TAT-interacting pr 93.4 0.48 1.6E-05 49.0 11.8 79 459-571 15-94 (242)
128 4id9_A Short-chain dehydrogena 93.3 0.23 7.9E-06 54.5 9.8 40 69-109 13-53 (347)
129 3rft_A Uronate dehydrogenase; 93.3 0.16 5.4E-06 54.1 8.0 98 462-598 3-115 (267)
130 3slg_A PBGP3 protein; structur 93.3 0.21 7.2E-06 55.5 9.5 106 68-200 17-147 (372)
131 3lf2_A Short chain oxidoreduct 93.3 0.18 6.2E-06 53.6 8.5 63 460-547 6-69 (265)
132 2dpo_A L-gulonate 3-dehydrogen 93.3 0.12 4.2E-06 56.9 7.3 34 462-501 6-39 (319)
133 3ew7_A LMO0794 protein; Q8Y8U8 93.2 0.28 9.5E-06 49.9 9.6 94 463-595 1-104 (221)
134 1lu9_A Methylene tetrahydromet 93.2 0.1 3.5E-06 56.5 6.4 80 460-570 117-197 (287)
135 4g65_A TRK system potassium up 93.1 0.1 3.5E-06 60.7 6.7 98 461-592 234-331 (461)
136 2bll_A Protein YFBG; decarboxy 93.1 0.24 8.4E-06 54.1 9.4 103 463-599 1-122 (345)
137 2x4g_A Nucleoside-diphosphate- 93.0 0.3 1E-05 53.3 10.1 101 463-599 14-131 (342)
138 4egb_A DTDP-glucose 4,6-dehydr 93.0 0.31 1.1E-05 53.5 10.3 106 73-199 22-154 (346)
139 3l9w_A Glutathione-regulated p 93.0 0.18 6.2E-06 57.7 8.4 91 462-587 4-94 (413)
140 3d1l_A Putative NADP oxidoredu 93.0 0.1 3.6E-06 55.5 6.0 93 460-593 8-102 (266)
141 2egg_A AROE, shikimate 5-dehyd 93.0 0.2 6.9E-06 54.6 8.4 36 460-500 139-174 (297)
142 3o38_A Short chain dehydrogena 92.9 0.15 5.2E-06 54.0 7.3 36 459-500 19-56 (266)
143 3phh_A Shikimate dehydrogenase 92.9 0.1 3.5E-06 56.1 5.8 93 75-190 118-228 (269)
144 3vps_A TUNA, NAD-dependent epi 92.9 0.16 5.4E-06 54.9 7.4 37 459-501 4-41 (321)
145 3dtt_A NADP oxidoreductase; st 92.8 0.46 1.6E-05 50.0 10.7 94 71-180 15-109 (245)
146 3vku_A L-LDH, L-lactate dehydr 92.8 0.29 1E-05 54.1 9.4 75 73-170 7-85 (326)
147 3qvo_A NMRA family protein; st 92.8 0.36 1.2E-05 50.2 9.7 103 461-599 22-130 (236)
148 3nyw_A Putative oxidoreductase 92.8 0.16 5.4E-06 53.7 7.0 64 459-547 4-69 (250)
149 2x0j_A Malate dehydrogenase; o 92.8 0.39 1.3E-05 52.3 10.2 72 77-170 2-78 (294)
150 3enk_A UDP-glucose 4-epimerase 92.7 0.24 8.3E-06 54.2 8.8 108 462-599 5-134 (341)
151 4ezb_A Uncharacterized conserv 92.7 0.33 1.1E-05 53.4 9.8 106 452-594 14-122 (317)
152 4aj2_A L-lactate dehydrogenase 92.7 0.18 6.1E-06 56.0 7.6 77 71-169 15-95 (331)
153 3l9w_A Glutathione-regulated p 92.7 0.36 1.2E-05 55.2 10.3 91 75-193 4-101 (413)
154 1hyh_A L-hicdh, L-2-hydroxyiso 92.7 0.53 1.8E-05 51.4 11.3 75 76-173 2-81 (309)
155 4ezb_A Uncharacterized conserv 92.7 0.35 1.2E-05 53.2 9.9 82 75-179 24-105 (317)
156 2gn4_A FLAA1 protein, UDP-GLCN 92.6 0.19 6.5E-06 55.7 7.8 80 460-570 19-100 (344)
157 4e21_A 6-phosphogluconate dehy 92.6 0.13 4.5E-06 57.7 6.4 121 460-597 20-144 (358)
158 4e21_A 6-phosphogluconate dehy 92.6 0.18 6E-06 56.6 7.4 115 73-196 20-143 (358)
159 2d4a_B Malate dehydrogenase; a 92.6 0.34 1.2E-05 53.1 9.6 71 77-169 1-75 (308)
160 3i6i_A Putative leucoanthocyan 92.4 0.22 7.7E-06 54.9 8.0 102 460-590 8-115 (346)
161 4gbj_A 6-phosphogluconate dehy 92.4 0.7 2.4E-05 50.3 11.8 109 75-196 5-125 (297)
162 1p77_A Shikimate 5-dehydrogena 92.4 0.26 8.8E-06 53.0 8.2 35 460-500 117-151 (272)
163 1oju_A MDH, malate dehydrogena 92.4 0.34 1.2E-05 52.7 9.2 72 77-170 2-78 (294)
164 2z1m_A GDP-D-mannose dehydrata 92.4 0.16 5.6E-06 55.4 6.8 34 461-500 2-36 (345)
165 3p7m_A Malate dehydrogenase; p 92.4 0.25 8.7E-06 54.5 8.2 36 460-500 3-38 (321)
166 2rcy_A Pyrroline carboxylate r 92.4 0.2 6.8E-06 53.1 7.2 35 75-109 4-41 (262)
167 3pqe_A L-LDH, L-lactate dehydr 92.3 0.29 1E-05 54.1 8.7 35 462-500 5-39 (326)
168 3dqp_A Oxidoreductase YLBE; al 92.3 0.45 1.6E-05 48.6 9.7 91 77-197 2-109 (219)
169 3pqe_A L-LDH, L-lactate dehydr 92.3 0.27 9.2E-06 54.4 8.3 73 75-170 5-82 (326)
170 2c5a_A GDP-mannose-3', 5'-epim 92.3 0.41 1.4E-05 53.6 10.0 103 461-599 28-150 (379)
171 2q1s_A Putative nucleotide sug 92.3 0.39 1.3E-05 53.7 9.9 108 459-600 29-157 (377)
172 2z1n_A Dehydrogenase; reductas 92.3 0.32 1.1E-05 51.4 8.7 35 460-500 5-40 (260)
173 3m2p_A UDP-N-acetylglucosamine 92.3 0.78 2.7E-05 49.5 12.0 94 75-199 2-114 (311)
174 3qiv_A Short-chain dehydrogena 92.2 0.31 1.1E-05 51.1 8.5 36 459-500 6-42 (253)
175 2q1w_A Putative nucleotide sug 92.2 0.4 1.4E-05 52.5 9.6 36 459-500 18-54 (333)
176 1gpj_A Glutamyl-tRNA reductase 92.2 0.22 7.4E-06 56.8 7.7 73 73-171 165-237 (404)
177 3nzo_A UDP-N-acetylglucosamine 92.1 0.68 2.3E-05 52.4 11.7 112 456-594 29-165 (399)
178 3tl2_A Malate dehydrogenase; c 92.0 0.32 1.1E-05 53.6 8.4 77 73-169 6-86 (315)
179 1jay_A Coenzyme F420H2:NADP+ o 92.0 0.45 1.5E-05 48.5 9.1 31 464-500 2-33 (212)
180 1ldn_A L-lactate dehydrogenase 91.9 0.37 1.3E-05 53.0 8.9 72 75-169 6-82 (316)
181 3vku_A L-LDH, L-lactate dehydr 91.9 0.34 1.2E-05 53.6 8.6 75 461-570 8-85 (326)
182 3o26_A Salutaridine reductase; 91.9 0.29 9.9E-06 52.7 7.9 64 459-548 9-73 (311)
183 2x6t_A ADP-L-glycero-D-manno-h 91.9 0.53 1.8E-05 52.0 10.2 41 69-109 40-81 (357)
184 1p9l_A Dihydrodipicolinate red 91.9 0.39 1.3E-05 50.9 8.7 98 77-198 2-108 (245)
185 1nyt_A Shikimate 5-dehydrogena 91.9 0.32 1.1E-05 52.2 8.2 73 73-171 117-190 (271)
186 3d1l_A Putative NADP oxidoredu 91.8 0.5 1.7E-05 50.1 9.6 81 73-181 8-88 (266)
187 1p77_A Shikimate 5-dehydrogena 91.8 0.35 1.2E-05 51.9 8.3 73 73-171 117-190 (272)
188 3e48_A Putative nucleoside-dip 91.8 0.81 2.8E-05 48.7 11.3 98 463-596 1-108 (289)
189 2h78_A Hibadh, 3-hydroxyisobut 91.7 0.16 5.3E-06 55.2 5.5 33 463-501 4-36 (302)
190 2d5c_A AROE, shikimate 5-dehyd 91.7 0.45 1.6E-05 50.6 9.1 34 73-108 115-148 (263)
191 1oju_A MDH, malate dehydrogena 91.7 0.46 1.6E-05 51.7 9.2 35 463-501 1-35 (294)
192 1lld_A L-lactate dehydrogenase 91.7 0.81 2.8E-05 49.9 11.3 74 75-170 7-84 (319)
193 2pzm_A Putative nucleotide sug 91.6 0.75 2.6E-05 50.2 11.0 36 72-108 17-53 (330)
194 2hun_A 336AA long hypothetical 91.6 0.66 2.3E-05 50.5 10.5 111 461-599 2-132 (336)
195 3svt_A Short-chain type dehydr 91.6 0.37 1.3E-05 51.6 8.2 36 459-500 8-44 (281)
196 2cvz_A Dehydrogenase, 3-hydrox 91.5 0.36 1.2E-05 51.7 8.1 31 463-500 2-32 (289)
197 3pp8_A Glyoxylate/hydroxypyruv 91.5 0.25 8.6E-06 54.4 6.9 36 459-500 136-171 (315)
198 3ioy_A Short-chain dehydrogena 91.5 0.28 9.6E-06 53.8 7.3 63 460-547 6-69 (319)
199 4dqv_A Probable peptide synthe 91.5 0.49 1.7E-05 54.9 9.8 125 461-599 72-219 (478)
200 3qsg_A NAD-binding phosphogluc 91.4 0.32 1.1E-05 53.3 7.7 35 461-500 23-57 (312)
201 2hjr_A Malate dehydrogenase; m 91.4 0.4 1.4E-05 53.0 8.5 78 74-169 13-90 (328)
202 3qvo_A NMRA family protein; st 91.3 0.78 2.7E-05 47.5 10.2 98 75-199 23-130 (236)
203 1vkn_A N-acetyl-gamma-glutamyl 91.2 0.2 6.9E-06 55.9 5.8 93 463-593 14-107 (351)
204 3ew7_A LMO0794 protein; Q8Y8U8 91.2 1.2 4E-05 45.1 11.3 91 77-196 2-105 (221)
205 4f6c_A AUSA reductase domain p 91.2 0.66 2.3E-05 52.7 10.4 114 461-601 68-203 (427)
206 3fi9_A Malate dehydrogenase; s 91.2 0.4 1.4E-05 53.4 8.2 77 73-170 6-85 (343)
207 1orr_A CDP-tyvelose-2-epimeras 91.2 0.6 2E-05 51.0 9.6 107 463-599 2-130 (347)
208 3pk0_A Short-chain dehydrogena 91.2 0.19 6.6E-06 53.4 5.4 36 459-500 7-43 (262)
209 3h7a_A Short chain dehydrogena 91.1 0.38 1.3E-05 50.7 7.7 36 459-500 4-40 (252)
210 2v6b_A L-LDH, L-lactate dehydr 91.1 0.84 2.9E-05 49.8 10.6 35 463-501 1-35 (304)
211 2hjr_A Malate dehydrogenase; m 91.1 0.47 1.6E-05 52.5 8.6 35 461-500 13-47 (328)
212 1x7d_A Ornithine cyclodeaminas 91.1 0.49 1.7E-05 52.8 8.8 76 74-171 128-204 (350)
213 3i6i_A Putative leucoanthocyan 91.1 0.39 1.3E-05 52.9 8.0 103 73-196 8-121 (346)
214 2jl1_A Triphenylmethane reduct 91.1 0.31 1E-05 51.9 7.0 98 463-596 1-109 (287)
215 1yb1_A 17-beta-hydroxysteroid 91.0 0.46 1.6E-05 50.6 8.3 36 459-500 28-64 (272)
216 3vps_A TUNA, NAD-dependent epi 91.0 0.61 2.1E-05 50.2 9.4 37 72-109 4-41 (321)
217 3pxx_A Carveol dehydrogenase; 91.0 0.4 1.4E-05 51.3 7.8 37 458-500 6-43 (287)
218 3tjr_A Short chain dehydrogena 91.0 0.45 1.5E-05 51.6 8.3 35 460-500 29-64 (301)
219 1p9l_A Dihydrodipicolinate red 91.0 0.39 1.3E-05 50.8 7.5 74 464-597 2-79 (245)
220 3i1j_A Oxidoreductase, short c 91.0 0.3 1E-05 51.0 6.6 36 459-500 11-47 (247)
221 3u62_A Shikimate dehydrogenase 90.9 0.23 7.7E-06 53.0 5.6 36 460-501 107-142 (253)
222 1ldn_A L-lactate dehydrogenase 90.9 0.65 2.2E-05 51.0 9.5 35 462-500 6-40 (316)
223 3rku_A Oxidoreductase YMR226C; 90.9 0.85 2.9E-05 49.2 10.3 68 68-154 26-96 (287)
224 3hg7_A D-isomer specific 2-hyd 90.9 0.28 9.5E-06 54.2 6.5 37 459-501 137-173 (324)
225 3ius_A Uncharacterized conserv 90.9 0.97 3.3E-05 48.0 10.7 96 75-199 5-108 (286)
226 2d5c_A AROE, shikimate 5-dehyd 90.8 0.44 1.5E-05 50.7 7.9 34 460-500 115-148 (263)
227 3qlj_A Short chain dehydrogena 90.8 0.28 9.4E-06 53.9 6.5 76 454-546 19-95 (322)
228 3uve_A Carveol dehydrogenase ( 90.8 0.61 2.1E-05 50.0 9.1 36 459-500 8-44 (286)
229 3awd_A GOX2181, putative polyo 90.8 0.51 1.7E-05 49.5 8.3 35 460-500 11-46 (260)
230 2ydy_A Methionine adenosyltran 90.8 0.37 1.3E-05 52.1 7.4 32 462-499 2-34 (315)
231 3phh_A Shikimate dehydrogenase 90.8 0.16 5.4E-06 54.7 4.3 33 462-500 118-150 (269)
232 3d0o_A L-LDH 1, L-lactate dehy 90.8 0.68 2.3E-05 50.9 9.5 38 459-500 3-40 (317)
233 3pef_A 6-phosphogluconate dehy 90.8 0.21 7.2E-06 53.8 5.3 33 463-501 2-34 (287)
234 2dc1_A L-aspartate dehydrogena 90.7 0.73 2.5E-05 48.1 9.4 78 464-593 2-81 (236)
235 3nzo_A UDP-N-acetylglucosamine 90.7 2.7 9.3E-05 47.4 14.8 105 71-194 31-165 (399)
236 3rkr_A Short chain oxidoreduct 90.7 0.21 7.3E-06 52.9 5.2 63 458-547 25-88 (262)
237 3obb_A Probable 3-hydroxyisobu 90.7 1.1 3.7E-05 48.8 11.0 110 76-196 4-125 (300)
238 2ewd_A Lactate dehydrogenase,; 90.7 0.67 2.3E-05 50.8 9.3 34 75-108 4-37 (317)
239 3s55_A Putative short-chain de 90.6 0.57 1.9E-05 50.1 8.6 39 456-500 4-43 (281)
240 1rkx_A CDP-glucose-4,6-dehydra 90.6 1.1 3.8E-05 49.3 11.2 37 458-500 5-42 (357)
241 1sb8_A WBPP; epimerase, 4-epim 90.6 0.96 3.3E-05 49.7 10.7 109 73-199 25-158 (352)
242 1xu9_A Corticosteroid 11-beta- 90.6 0.47 1.6E-05 50.9 7.9 36 459-500 25-61 (286)
243 3gaf_A 7-alpha-hydroxysteroid 90.6 0.46 1.6E-05 50.1 7.8 36 459-500 9-45 (256)
244 1fmc_A 7 alpha-hydroxysteroid 90.6 0.38 1.3E-05 50.2 7.1 34 460-499 9-43 (255)
245 2hrz_A AGR_C_4963P, nucleoside 90.6 0.72 2.4E-05 50.4 9.6 35 460-500 12-54 (342)
246 2ewd_A Lactate dehydrogenase,; 90.6 0.71 2.4E-05 50.6 9.4 35 462-501 4-38 (317)
247 1sby_A Alcohol dehydrogenase; 90.6 0.61 2.1E-05 48.9 8.6 84 460-569 3-92 (254)
248 3tfo_A Putative 3-oxoacyl-(acy 90.5 0.46 1.6E-05 50.6 7.7 35 460-500 2-37 (264)
249 1ez4_A Lactate dehydrogenase; 90.5 0.91 3.1E-05 49.9 10.2 73 76-171 6-82 (318)
250 3r1i_A Short-chain type dehydr 90.5 0.46 1.6E-05 50.9 7.8 36 459-500 29-65 (276)
251 1xq6_A Unknown protein; struct 90.5 0.76 2.6E-05 47.5 9.2 35 461-501 3-40 (253)
252 2v6b_A L-LDH, L-lactate dehydr 90.5 0.8 2.7E-05 50.0 9.7 71 77-170 2-76 (304)
253 3sx2_A Putative 3-ketoacyl-(ac 90.4 0.76 2.6E-05 48.9 9.3 75 459-548 10-85 (278)
254 2d4a_B Malate dehydrogenase; a 90.4 0.84 2.9E-05 50.0 9.8 72 464-570 1-76 (308)
255 3sc4_A Short chain dehydrogena 90.4 0.73 2.5E-05 49.5 9.2 69 460-548 7-76 (285)
256 2jah_A Clavulanic acid dehydro 90.4 0.61 2.1E-05 48.9 8.4 35 460-500 5-40 (247)
257 4e12_A Diketoreductase; oxidor 90.4 0.65 2.2E-05 50.0 8.8 33 75-108 4-36 (283)
258 2pv7_A T-protein [includes: ch 90.4 0.49 1.7E-05 51.4 7.8 32 76-108 22-54 (298)
259 2axq_A Saccharopine dehydrogen 90.3 0.23 7.9E-06 57.7 5.5 37 72-108 20-56 (467)
260 1ek6_A UDP-galactose 4-epimera 90.3 0.61 2.1E-05 51.1 8.7 114 462-599 2-137 (348)
261 3ehe_A UDP-glucose 4-epimerase 90.3 0.74 2.5E-05 49.7 9.3 98 463-599 2-119 (313)
262 3ggo_A Prephenate dehydrogenas 90.3 1.1 3.8E-05 49.0 10.8 82 75-183 33-116 (314)
263 3afn_B Carbonyl reductase; alp 90.3 0.56 1.9E-05 48.9 8.1 36 459-500 4-40 (258)
264 2ae2_A Protein (tropinone redu 90.3 0.73 2.5E-05 48.6 9.0 35 460-500 7-42 (260)
265 3ldh_A Lactate dehydrogenase; 90.3 0.35 1.2E-05 53.4 6.6 73 75-169 21-97 (330)
266 1gee_A Glucose 1-dehydrogenase 90.3 0.51 1.8E-05 49.5 7.7 35 459-499 4-39 (261)
267 3ucx_A Short chain dehydrogena 90.3 0.63 2.1E-05 49.3 8.4 36 459-500 8-44 (264)
268 3grp_A 3-oxoacyl-(acyl carrier 90.2 0.33 1.1E-05 51.8 6.2 43 452-500 17-60 (266)
269 1jay_A Coenzyme F420H2:NADP+ o 90.2 0.99 3.4E-05 45.9 9.6 30 77-107 2-32 (212)
270 1zem_A Xylitol dehydrogenase; 90.2 0.6 2E-05 49.4 8.2 36 459-500 4-40 (262)
271 2zyd_A 6-phosphogluconate dehy 90.1 0.41 1.4E-05 55.8 7.4 38 458-501 11-48 (480)
272 3obb_A Probable 3-hydroxyisobu 90.1 0.81 2.8E-05 49.9 9.3 118 463-598 4-127 (300)
273 4imr_A 3-oxoacyl-(acyl-carrier 90.1 0.62 2.1E-05 49.9 8.3 40 455-500 26-66 (275)
274 3sju_A Keto reductase; short-c 90.1 0.54 1.8E-05 50.4 7.8 36 459-500 21-57 (279)
275 1mxh_A Pteridine reductase 2; 90.1 0.62 2.1E-05 49.5 8.2 37 457-499 6-43 (276)
276 4e6p_A Probable sorbitol dehyd 90.1 0.63 2.1E-05 49.1 8.2 36 459-500 5-41 (259)
277 2bgk_A Rhizome secoisolaricire 90.1 0.65 2.2E-05 49.2 8.4 36 459-500 13-49 (278)
278 1t2d_A LDH-P, L-lactate dehydr 90.0 0.93 3.2E-05 49.9 9.8 72 76-169 5-80 (322)
279 1yxm_A Pecra, peroxisomal tran 90.0 0.54 1.8E-05 50.7 7.8 36 459-500 15-51 (303)
280 2x6t_A ADP-L-glycero-D-manno-h 90.0 0.63 2.2E-05 51.3 8.5 38 458-500 42-80 (357)
281 3e03_A Short chain dehydrogena 89.9 0.84 2.9E-05 48.7 9.2 36 460-501 4-40 (274)
282 3imf_A Short chain dehydrogena 89.9 0.34 1.2E-05 51.1 6.0 36 459-500 3-39 (257)
283 3sxp_A ADP-L-glycero-D-mannohe 89.9 1.7 5.7E-05 48.0 11.9 112 73-199 8-143 (362)
284 3kkj_A Amine oxidase, flavin-c 89.9 0.21 7E-06 51.0 4.2 32 463-500 3-34 (336)
285 2gn4_A FLAA1 protein, UDP-GLCN 89.9 1.7 5.7E-05 48.0 11.9 99 73-194 19-142 (344)
286 2zat_A Dehydrogenase/reductase 89.9 0.48 1.6E-05 49.9 7.2 36 459-500 11-47 (260)
287 1guz_A Malate dehydrogenase; o 89.9 1.1 3.6E-05 49.1 10.1 34 463-500 1-34 (310)
288 2bka_A CC3, TAT-interacting pr 89.9 1.9 6.4E-05 44.5 11.6 38 72-109 15-54 (242)
289 1ez4_A Lactate dehydrogenase; 89.9 1 3.5E-05 49.5 10.0 74 463-571 6-82 (318)
290 2i99_A MU-crystallin homolog; 89.8 0.49 1.7E-05 51.9 7.3 73 73-171 133-206 (312)
291 3ai3_A NADPH-sorbose reductase 89.8 0.62 2.1E-05 49.2 8.0 35 460-500 5-40 (263)
292 1nvt_A Shikimate 5'-dehydrogen 89.8 0.26 9E-06 53.3 5.1 74 73-170 126-202 (287)
293 4egf_A L-xylulose reductase; s 89.8 0.44 1.5E-05 50.6 6.8 36 459-500 17-53 (266)
294 2gdz_A NAD+-dependent 15-hydro 89.8 0.43 1.5E-05 50.6 6.7 35 460-500 5-40 (267)
295 2zqz_A L-LDH, L-lactate dehydr 89.7 1.1 3.6E-05 49.6 9.9 74 74-170 8-85 (326)
296 3h2s_A Putative NADH-flavin re 89.7 1.1 3.7E-05 45.6 9.5 93 77-197 2-108 (224)
297 1a5z_A L-lactate dehydrogenase 89.7 0.61 2.1E-05 51.3 8.0 72 77-171 2-77 (319)
298 1np3_A Ketol-acid reductoisome 89.7 1.1 3.8E-05 49.6 10.2 98 70-197 11-109 (338)
299 1gy8_A UDP-galactose 4-epimera 89.7 1.4 4.9E-05 49.1 11.3 119 462-599 2-149 (397)
300 3pgx_A Carveol dehydrogenase; 89.7 0.86 2.9E-05 48.7 9.0 37 459-501 12-49 (280)
301 3gt0_A Pyrroline-5-carboxylate 89.6 0.53 1.8E-05 49.5 7.2 72 76-175 3-77 (247)
302 1t2d_A LDH-P, L-lactate dehydr 89.6 1.1 3.8E-05 49.3 10.0 33 463-500 5-37 (322)
303 2o23_A HADH2 protein; HSD17B10 89.6 0.64 2.2E-05 48.8 7.9 35 460-500 10-45 (265)
304 2q1s_A Putative nucleotide sug 89.6 1.4 4.8E-05 49.0 11.1 102 73-200 30-157 (377)
305 1y1p_A ARII, aldehyde reductas 89.6 1.8 6.3E-05 46.8 11.8 106 73-199 9-137 (342)
306 2zcu_A Uncharacterized oxidore 89.6 0.48 1.6E-05 50.3 6.9 98 464-597 1-107 (286)
307 4fn4_A Short chain dehydrogena 89.6 0.44 1.5E-05 50.8 6.4 62 459-547 4-66 (254)
308 1oc2_A DTDP-glucose 4,6-dehydr 89.6 1.3 4.3E-05 48.5 10.5 107 463-600 5-131 (348)
309 2x4g_A Nucleoside-diphosphate- 89.6 1.6 5.5E-05 47.4 11.3 95 77-199 15-131 (342)
310 3gvx_A Glycerate dehydrogenase 89.5 0.19 6.6E-06 54.6 3.7 78 57-169 102-181 (290)
311 3kvo_A Hydroxysteroid dehydrog 89.4 0.83 2.8E-05 50.8 8.9 91 459-569 42-137 (346)
312 1lu9_A Methylene tetrahydromet 89.4 0.51 1.7E-05 50.9 7.0 34 73-107 117-151 (287)
313 3l77_A Short-chain alcohol deh 89.4 0.86 2.9E-05 47.1 8.5 33 462-500 2-35 (235)
314 3lyl_A 3-oxoacyl-(acyl-carrier 89.4 0.4 1.4E-05 50.1 6.0 35 460-500 3-38 (247)
315 1vl0_A DTDP-4-dehydrorhamnose 89.4 0.4 1.4E-05 51.2 6.1 36 459-500 9-45 (292)
316 3evt_A Phosphoglycerate dehydr 89.4 0.22 7.5E-06 55.1 4.1 36 459-500 134-169 (324)
317 4da9_A Short-chain dehydrogena 89.4 0.47 1.6E-05 50.9 6.7 36 458-499 25-61 (280)
318 4iin_A 3-ketoacyl-acyl carrier 89.4 0.47 1.6E-05 50.5 6.6 36 459-500 26-62 (271)
319 3nep_X Malate dehydrogenase; h 89.4 0.92 3.1E-05 49.8 9.0 34 463-500 1-34 (314)
320 2rhc_B Actinorhodin polyketide 89.3 0.8 2.7E-05 48.9 8.4 35 460-500 20-55 (277)
321 1ur5_A Malate dehydrogenase; o 89.3 1.1 3.9E-05 48.9 9.7 73 76-170 3-79 (309)
322 3lk7_A UDP-N-acetylmuramoylala 89.2 0.69 2.3E-05 53.4 8.3 94 73-191 7-101 (451)
323 2xxj_A L-LDH, L-lactate dehydr 89.2 1 3.5E-05 49.3 9.3 72 76-170 1-76 (310)
324 2x0j_A Malate dehydrogenase; o 89.2 1.2 4.1E-05 48.4 9.6 33 463-499 1-33 (294)
325 3ego_A Probable 2-dehydropanto 89.2 0.58 2E-05 51.1 7.3 32 75-108 2-33 (307)
326 1ae1_A Tropinone reductase-I; 89.2 0.92 3.2E-05 48.3 8.8 35 460-500 19-54 (273)
327 2ydy_A Methionine adenosyltran 89.1 0.88 3E-05 49.1 8.6 32 75-107 2-34 (315)
328 3v8b_A Putative dehydrogenase, 89.1 0.75 2.6E-05 49.4 8.0 37 458-500 24-61 (283)
329 4fc7_A Peroxisomal 2,4-dienoyl 89.1 0.69 2.4E-05 49.4 7.7 36 459-500 24-60 (277)
330 3tzq_B Short-chain type dehydr 89.1 0.61 2.1E-05 49.6 7.2 36 459-500 8-44 (271)
331 1pjc_A Protein (L-alanine dehy 89.0 0.56 1.9E-05 52.5 7.2 36 72-108 164-199 (361)
332 3k6j_A Protein F01G10.3, confi 89.0 0.27 9.3E-06 56.9 4.6 33 463-501 55-87 (460)
333 1vl6_A Malate oxidoreductase; 88.9 0.33 1.1E-05 54.6 5.1 37 72-108 189-225 (388)
334 3v2g_A 3-oxoacyl-[acyl-carrier 88.9 0.78 2.7E-05 48.9 8.0 35 459-499 28-63 (271)
335 4dyv_A Short-chain dehydrogena 88.9 0.62 2.1E-05 49.8 7.1 37 458-500 24-61 (272)
336 1vl8_A Gluconate 5-dehydrogena 88.9 0.91 3.1E-05 48.2 8.4 36 459-500 18-54 (267)
337 3ftp_A 3-oxoacyl-[acyl-carrier 88.9 0.57 1.9E-05 50.0 6.8 43 452-500 17-61 (270)
338 2xxj_A L-LDH, L-lactate dehydr 88.9 0.88 3E-05 49.8 8.5 73 463-570 1-76 (310)
339 2z1m_A GDP-D-mannose dehydrata 88.9 1.9 6.3E-05 46.9 11.2 35 73-108 1-36 (345)
340 3sc6_A DTDP-4-dehydrorhamnose 88.9 0.48 1.7E-05 50.4 6.3 30 464-499 7-37 (287)
341 1eq2_A ADP-L-glycero-D-mannohe 88.8 1.2 4.3E-05 47.5 9.6 32 77-108 1-33 (310)
342 3r6d_A NAD-dependent epimerase 88.8 1.6 5.4E-05 44.5 10.0 97 76-198 6-112 (221)
343 2uvd_A 3-oxoacyl-(acyl-carrier 88.8 0.68 2.3E-05 48.4 7.3 34 460-499 2-36 (246)
344 3nep_X Malate dehydrogenase; h 88.8 1.4 4.8E-05 48.3 10.0 72 77-170 2-78 (314)
345 3fbt_A Chorismate mutase and s 88.8 0.33 1.1E-05 52.6 4.8 36 460-500 120-155 (282)
346 4gwg_A 6-phosphogluconate dehy 88.8 0.72 2.5E-05 53.7 8.0 117 75-196 4-131 (484)
347 2aef_A Calcium-gated potassium 88.8 0.89 3E-05 47.2 8.1 90 461-587 8-97 (234)
348 3tsc_A Putative oxidoreductase 88.8 0.62 2.1E-05 49.7 7.0 37 459-501 8-45 (277)
349 2pnf_A 3-oxoacyl-[acyl-carrier 88.7 0.63 2.2E-05 48.3 7.0 35 460-500 5-40 (248)
350 2pv7_A T-protein [includes: ch 88.7 0.8 2.7E-05 49.7 7.9 34 462-501 21-55 (298)
351 1y6j_A L-lactate dehydrogenase 88.7 0.74 2.5E-05 50.6 7.7 74 75-171 7-84 (318)
352 1pzg_A LDH, lactate dehydrogen 88.6 1.1 3.7E-05 49.5 9.1 33 463-500 10-42 (331)
353 3ldh_A Lactate dehydrogenase; 88.6 1.1 3.8E-05 49.5 9.0 34 462-499 21-54 (330)
354 3tox_A Short chain dehydrogena 88.6 0.33 1.1E-05 52.2 4.7 36 459-500 5-41 (280)
355 1x7d_A Ornithine cyclodeaminas 88.5 0.72 2.5E-05 51.5 7.6 76 461-571 128-204 (350)
356 1spx_A Short-chain reductase f 88.5 0.68 2.3E-05 49.3 7.1 36 459-500 3-39 (278)
357 1oaa_A Sepiapterin reductase; 88.5 0.44 1.5E-05 50.2 5.6 63 460-547 4-70 (259)
358 1z7e_A Protein aRNA; rossmann 88.5 0.74 2.5E-05 55.7 8.3 107 459-599 312-437 (660)
359 3v2h_A D-beta-hydroxybutyrate 88.5 0.63 2.2E-05 49.9 6.9 36 458-499 21-57 (281)
360 1ur5_A Malate dehydrogenase; o 88.4 1.6 5.5E-05 47.7 10.2 33 463-500 3-35 (309)
361 2zqz_A L-LDH, L-lactate dehydr 88.4 1.2 4.3E-05 49.0 9.3 74 462-570 9-85 (326)
362 4ibo_A Gluconate dehydrogenase 88.4 0.45 1.5E-05 50.8 5.6 36 459-500 23-59 (271)
363 3ggo_A Prephenate dehydrogenas 88.4 1.8 6.1E-05 47.4 10.5 94 462-594 33-129 (314)
364 3ko8_A NAD-dependent epimerase 88.4 0.96 3.3E-05 48.6 8.3 32 76-108 1-33 (312)
365 3dtt_A NADP oxidoreductase; st 88.4 0.38 1.3E-05 50.6 5.0 39 457-501 14-52 (245)
366 2g5c_A Prephenate dehydrogenas 88.4 2.3 8E-05 45.2 11.3 80 76-182 2-83 (281)
367 2ywl_A Thioredoxin reductase r 88.4 0.38 1.3E-05 47.5 4.6 32 464-501 3-34 (180)
368 2hun_A 336AA long hypothetical 88.4 2.2 7.6E-05 46.2 11.4 35 74-108 2-38 (336)
369 1nff_A Putative oxidoreductase 88.4 0.69 2.4E-05 48.9 7.0 35 460-500 5-40 (260)
370 2c5a_A GDP-mannose-3', 5'-epim 88.4 2 6.9E-05 47.8 11.2 34 75-109 29-63 (379)
371 1vl6_A Malate oxidoreductase; 88.3 0.33 1.1E-05 54.6 4.5 37 459-500 189-225 (388)
372 3n74_A 3-ketoacyl-(acyl-carrie 88.3 0.94 3.2E-05 47.6 8.0 36 459-500 6-42 (261)
373 1wma_A Carbonyl reductase [NAD 88.3 0.56 1.9E-05 49.3 6.2 34 461-500 3-38 (276)
374 1r6d_A TDP-glucose-4,6-dehydra 88.3 2 6.7E-05 46.8 10.9 107 463-599 1-132 (337)
375 3rih_A Short chain dehydrogena 88.3 0.58 2E-05 50.7 6.5 36 459-500 38-74 (293)
376 1e6u_A GDP-fucose synthetase; 88.2 0.63 2.2E-05 50.3 6.7 32 462-499 3-35 (321)
377 1xq1_A Putative tropinone redu 88.2 0.85 2.9E-05 48.0 7.6 35 460-500 12-47 (266)
378 2gas_A Isoflavone reductase; N 88.1 2.4 8.3E-05 45.2 11.4 99 462-588 2-106 (307)
379 3ksu_A 3-oxoacyl-acyl carrier 88.1 0.58 2E-05 49.6 6.2 35 459-499 8-43 (262)
380 1x0v_A GPD-C, GPDH-C, glycerol 88.1 1.2 4.1E-05 49.2 9.1 91 75-181 8-110 (354)
381 2a9f_A Putative malic enzyme ( 88.1 0.4 1.4E-05 54.0 5.1 38 72-109 185-222 (398)
382 3oh8_A Nucleoside-diphosphate 88.1 2.1 7.1E-05 50.1 11.6 34 75-109 147-181 (516)
383 2iz1_A 6-phosphogluconate dehy 88.1 1.2 4E-05 51.9 9.2 33 462-500 5-37 (474)
384 2izz_A Pyrroline-5-carboxylate 88.1 1.2 4.2E-05 48.8 9.0 80 75-181 22-104 (322)
385 1guz_A Malate dehydrogenase; o 88.1 1.8 6.1E-05 47.3 10.3 72 77-170 2-78 (310)
386 1qyc_A Phenylcoumaran benzylic 88.1 0.85 2.9E-05 48.9 7.6 100 462-588 4-107 (308)
387 1xg5_A ARPG836; short chain de 88.1 1.6 5.5E-05 46.4 9.7 35 72-107 29-64 (279)
388 4hb9_A Similarities with proba 88.0 0.36 1.2E-05 53.9 4.7 33 462-500 1-33 (412)
389 4f3y_A DHPR, dihydrodipicolina 88.0 0.77 2.6E-05 49.4 7.1 84 460-597 5-107 (272)
390 4dry_A 3-oxoacyl-[acyl-carrier 88.0 0.74 2.5E-05 49.4 7.0 37 458-500 29-66 (281)
391 2vhw_A Alanine dehydrogenase; 87.9 0.56 1.9E-05 52.8 6.3 73 73-169 166-239 (377)
392 3ay3_A NAD-dependent epimerase 87.9 0.66 2.2E-05 48.9 6.5 98 463-599 3-115 (267)
393 1xkq_A Short-chain reductase f 87.9 0.75 2.6E-05 49.1 7.0 36 459-500 3-39 (280)
394 3ak4_A NADH-dependent quinucli 87.9 0.5 1.7E-05 49.9 5.6 35 460-500 10-45 (263)
395 2q1w_A Putative nucleotide sug 87.9 2.4 8.2E-05 46.2 11.3 35 73-108 19-54 (333)
396 1rpn_A GDP-mannose 4,6-dehydra 87.9 1.1 3.8E-05 48.7 8.5 36 459-500 11-47 (335)
397 2c20_A UDP-glucose 4-epimerase 87.9 0.98 3.4E-05 49.0 8.1 32 463-500 2-34 (330)
398 1w6u_A 2,4-dienoyl-COA reducta 87.9 0.63 2.1E-05 50.1 6.4 36 459-500 23-59 (302)
399 1sny_A Sniffer CG10964-PA; alp 87.9 0.83 2.8E-05 48.1 7.2 37 458-500 17-57 (267)
400 2dc1_A L-aspartate dehydrogena 87.9 1.7 5.8E-05 45.3 9.6 32 77-108 2-33 (236)
401 2wm3_A NMRA-like family domain 87.8 1.6 5.4E-05 46.7 9.6 101 462-596 5-117 (299)
402 1ks9_A KPA reductase;, 2-dehyd 87.8 1.6 5.4E-05 46.4 9.6 98 77-197 2-100 (291)
403 3sc6_A DTDP-4-dehydrorhamnose 87.8 0.36 1.2E-05 51.5 4.3 87 77-199 7-111 (287)
404 2zyd_A 6-phosphogluconate dehy 87.8 1.1 3.7E-05 52.2 8.7 37 70-107 10-46 (480)
405 3ehe_A UDP-glucose 4-epimerase 87.8 1.6 5.5E-05 47.0 9.6 29 76-106 2-31 (313)
406 2cvz_A Dehydrogenase, 3-hydrox 87.8 1.5 5E-05 46.9 9.2 66 76-173 2-67 (289)
407 2f1k_A Prephenate dehydrogenas 87.8 1.4 5E-05 46.8 9.2 30 77-107 2-31 (279)
408 3cxt_A Dehydrogenase with diff 87.7 0.68 2.3E-05 50.0 6.6 36 459-500 31-67 (291)
409 3hn2_A 2-dehydropantoate 2-red 87.7 0.39 1.3E-05 52.5 4.7 32 76-108 3-34 (312)
410 3e48_A Putative nucleoside-dip 87.7 2.6 9.1E-05 44.6 11.2 93 77-196 2-108 (289)
411 2hq1_A Glucose/ribitol dehydro 87.7 1.3 4.4E-05 45.9 8.5 33 460-498 3-36 (247)
412 2g5c_A Prephenate dehydrogenas 87.6 2.4 8.3E-05 45.1 10.9 92 463-593 2-96 (281)
413 1zk4_A R-specific alcohol dehy 87.6 0.75 2.5E-05 47.9 6.6 36 459-500 3-39 (251)
414 3doj_A AT3G25530, dehydrogenas 87.6 0.34 1.2E-05 52.9 4.1 36 460-501 19-54 (310)
415 1n2s_A DTDP-4-, DTDP-glucose o 87.6 0.36 1.2E-05 51.7 4.2 31 464-501 2-33 (299)
416 1omo_A Alanine dehydrogenase; 87.6 1.2 4.1E-05 49.0 8.5 73 74-171 124-197 (322)
417 3gvc_A Oxidoreductase, probabl 87.6 0.66 2.3E-05 49.7 6.3 36 459-500 26-62 (277)
418 1geg_A Acetoin reductase; SDR 87.6 1.3 4.4E-05 46.5 8.5 33 462-500 2-35 (256)
419 1dih_A Dihydrodipicolinate red 87.5 1.1 3.9E-05 48.0 8.1 100 461-597 4-106 (273)
420 1qyc_A Phenylcoumaran benzylic 87.5 2.6 8.9E-05 45.0 11.1 103 75-196 4-115 (308)
421 1n2s_A DTDP-4-, DTDP-glucose o 87.5 0.48 1.6E-05 50.7 5.2 90 77-199 2-109 (299)
422 2b4q_A Rhamnolipids biosynthes 87.4 0.65 2.2E-05 49.7 6.2 35 460-500 27-62 (276)
423 3oig_A Enoyl-[acyl-carrier-pro 87.4 1.3 4.6E-05 46.6 8.6 35 460-500 5-42 (266)
424 1bg6_A N-(1-D-carboxylethyl)-L 87.4 1.5 5E-05 48.5 9.2 99 73-196 2-110 (359)
425 3oec_A Carveol dehydrogenase ( 87.4 1.2 4.1E-05 48.7 8.4 38 458-501 42-80 (317)
426 4gx0_A TRKA domain protein; me 87.4 1.4 4.6E-05 52.3 9.5 87 463-588 349-435 (565)
427 3c1o_A Eugenol synthase; pheny 87.4 2.1 7.3E-05 46.1 10.4 99 462-588 4-107 (321)
428 3a28_C L-2.3-butanediol dehydr 87.4 1.3 4.6E-05 46.5 8.5 33 462-500 2-35 (258)
429 1hdc_A 3-alpha, 20 beta-hydrox 87.4 0.72 2.4E-05 48.6 6.4 35 460-500 3-38 (254)
430 1ja9_A 4HNR, 1,3,6,8-tetrahydr 87.3 0.7 2.4E-05 48.8 6.3 34 460-499 19-53 (274)
431 1nvt_A Shikimate 5'-dehydrogen 87.3 0.67 2.3E-05 50.0 6.2 33 460-499 126-158 (287)
432 2ew2_A 2-dehydropantoate 2-red 87.3 1.6 5.3E-05 47.1 9.2 95 77-197 5-111 (316)
433 2qq5_A DHRS1, dehydrogenase/re 87.3 0.55 1.9E-05 49.6 5.4 35 460-500 3-38 (260)
434 1xhl_A Short-chain dehydrogena 87.3 0.87 3E-05 49.2 7.1 35 460-500 24-59 (297)
435 2a9f_A Putative malic enzyme ( 87.2 0.42 1.4E-05 53.8 4.5 38 459-501 185-222 (398)
436 2h78_A Hibadh, 3-hydroxyisobut 87.2 1.3 4.3E-05 48.0 8.3 32 76-108 4-35 (302)
437 1e7w_A Pteridine reductase; di 87.2 1.3 4.3E-05 47.7 8.3 35 458-498 5-40 (291)
438 1o0s_A NAD-ME, NAD-dependent m 87.2 0.54 1.8E-05 55.1 5.5 92 443-539 283-403 (605)
439 1lnq_A MTHK channels, potassiu 87.2 0.98 3.3E-05 49.7 7.6 89 75-193 115-210 (336)
440 3c24_A Putative oxidoreductase 87.1 1.3 4.5E-05 47.5 8.4 87 77-194 13-102 (286)
441 2c07_A 3-oxoacyl-(acyl-carrier 87.1 1.2 4.1E-05 47.7 8.0 34 460-499 42-76 (285)
442 3ctm_A Carbonyl reductase; alc 87.1 0.77 2.6E-05 48.8 6.4 35 460-500 32-67 (279)
443 2nwq_A Probable short-chain de 87.0 1.1 3.7E-05 47.9 7.6 36 458-500 18-54 (272)
444 1z45_A GAL10 bifunctional prot 87.0 1.1 3.8E-05 54.5 8.7 36 458-499 7-43 (699)
445 3osu_A 3-oxoacyl-[acyl-carrier 87.0 0.89 3.1E-05 47.5 6.8 33 461-499 3-36 (246)
446 3gg2_A Sugar dehydrogenase, UD 87.0 1.4 4.7E-05 50.9 8.9 40 463-508 3-42 (450)
447 3enk_A UDP-glucose 4-epimerase 86.9 2.3 8E-05 46.1 10.4 103 75-199 5-134 (341)
448 1i36_A Conserved hypothetical 86.9 1.8 6.1E-05 45.7 9.2 74 77-180 2-75 (264)
449 1qyd_A Pinoresinol-lariciresin 86.9 2.6 9E-05 45.1 10.7 99 462-588 4-110 (313)
450 1rkx_A CDP-glucose-4,6-dehydra 86.8 3.1 0.00011 45.6 11.4 37 71-108 5-42 (357)
451 3hwr_A 2-dehydropantoate 2-red 86.8 1.8 6.1E-05 47.3 9.4 104 74-197 18-123 (318)
452 4huj_A Uncharacterized protein 86.8 0.38 1.3E-05 49.8 3.8 71 76-175 24-95 (220)
453 3ijp_A DHPR, dihydrodipicolina 86.8 1.4 4.9E-05 47.6 8.3 80 464-597 23-122 (288)
454 1nyt_A Shikimate 5-dehydrogena 86.8 0.47 1.6E-05 50.9 4.5 35 460-500 117-151 (271)
455 1u8x_X Maltose-6'-phosphate gl 86.8 2.1 7E-05 49.7 10.2 94 462-588 28-131 (472)
456 4gwg_A 6-phosphogluconate dehy 86.7 0.75 2.6E-05 53.6 6.5 125 462-597 4-132 (484)
457 2pk3_A GDP-6-deoxy-D-LYXO-4-he 86.7 1.9 6.4E-05 46.5 9.4 37 458-500 8-45 (321)
458 4iiu_A 3-oxoacyl-[acyl-carrier 86.7 1.1 3.9E-05 47.3 7.5 36 457-498 21-57 (267)
459 3ghy_A Ketopantoate reductase 86.7 0.4 1.4E-05 52.9 4.1 32 462-499 3-34 (335)
460 3eag_A UDP-N-acetylmuramate:L- 86.7 1.7 6E-05 47.7 9.2 89 76-191 5-95 (326)
461 3nyw_A Putative oxidoreductase 86.7 1.7 5.7E-05 45.6 8.7 62 72-153 4-67 (250)
462 1kew_A RMLB;, DTDP-D-glucose 4 86.7 2.2 7.6E-05 46.7 10.2 31 464-500 2-34 (361)
463 2x9g_A PTR1, pteridine reducta 86.6 1 3.6E-05 48.2 7.2 36 459-500 20-56 (288)
464 2gas_A Isoflavone reductase; N 86.6 1.2 4.3E-05 47.6 7.9 102 75-195 2-113 (307)
465 3fef_A Putative glucosidase LP 86.6 0.65 2.2E-05 53.5 5.9 94 461-587 4-103 (450)
466 4dmm_A 3-oxoacyl-[acyl-carrier 86.6 1 3.5E-05 47.9 7.2 35 459-499 25-60 (269)
467 2nu8_A Succinyl-COA ligase [AD 86.6 3.3 0.00011 44.7 11.2 113 74-197 6-126 (288)
468 3oh8_A Nucleoside-diphosphate 86.6 2.9 0.0001 48.8 11.7 33 462-500 147-180 (516)
469 3doj_A AT3G25530, dehydrogenas 86.6 0.72 2.5E-05 50.3 6.0 37 72-109 18-54 (310)
470 4gbj_A 6-phosphogluconate dehy 86.5 1.9 6.4E-05 46.8 9.2 118 462-597 5-126 (297)
471 1vl0_A DTDP-4-dehydrorhamnose 86.5 0.54 1.9E-05 50.1 4.9 36 72-108 9-45 (292)
472 3f9i_A 3-oxoacyl-[acyl-carrier 86.5 1.3 4.3E-05 46.2 7.6 36 459-500 11-47 (249)
473 1z82_A Glycerol-3-phosphate de 86.5 0.68 2.3E-05 51.0 5.8 91 77-193 16-111 (335)
474 1gq2_A Malic enzyme; oxidoredu 86.5 0.53 1.8E-05 54.8 4.9 77 458-539 278-365 (555)
475 2qhx_A Pteridine reductase 1; 86.5 1.4 4.8E-05 48.4 8.3 35 458-498 42-77 (328)
476 2p4q_A 6-phosphogluconate dehy 86.4 1.6 5.5E-05 51.0 9.2 125 461-596 9-137 (497)
477 3ajr_A NDP-sugar epimerase; L- 86.4 1.3 4.4E-05 47.7 7.9 31 464-500 1-34 (317)
478 1pzg_A LDH, lactate dehydrogen 86.4 1.9 6.5E-05 47.6 9.3 33 76-108 10-42 (331)
479 4dqv_A Probable peptide synthe 86.3 3.1 0.00011 48.1 11.6 121 73-199 71-219 (478)
480 1orr_A CDP-tyvelose-2-epimeras 86.2 2.8 9.6E-05 45.5 10.6 102 76-199 2-130 (347)
481 3d4o_A Dipicolinate synthase s 86.2 0.56 1.9E-05 50.8 4.8 36 459-500 152-187 (293)
482 3hhp_A Malate dehydrogenase; M 86.2 2.1 7.2E-05 46.9 9.4 74 77-170 2-78 (312)
483 1obb_A Maltase, alpha-glucosid 86.2 3 0.0001 48.4 11.1 94 462-587 3-105 (480)
484 1omo_A Alanine dehydrogenase; 86.2 1.5 5.1E-05 48.2 8.3 73 461-571 124-197 (322)
485 2iz1_A 6-phosphogluconate dehy 86.1 1.8 6.3E-05 50.2 9.5 82 74-181 4-89 (474)
486 3pwk_A Aspartate-semialdehyde 86.1 1.6 5.6E-05 48.8 8.6 94 463-595 3-97 (366)
487 3rft_A Uronate dehydrogenase; 86.1 1.3 4.5E-05 46.8 7.6 35 74-109 2-37 (267)
488 3hsk_A Aspartate-semialdehyde 86.1 0.83 2.9E-05 51.5 6.2 102 460-594 17-125 (381)
489 3euw_A MYO-inositol dehydrogen 86.0 1.8 6.1E-05 47.7 8.9 84 464-590 6-93 (344)
490 2yy7_A L-threonine dehydrogena 86.0 1 3.5E-05 48.3 6.8 33 462-500 2-37 (312)
491 3hn2_A 2-dehydropantoate 2-red 86.0 0.51 1.8E-05 51.5 4.4 33 463-501 3-35 (312)
492 2eez_A Alanine dehydrogenase; 86.0 0.97 3.3E-05 50.7 6.8 74 73-169 164-237 (369)
493 2vt3_A REX, redox-sensing tran 85.9 1.8 6.3E-05 44.7 8.3 88 75-191 85-174 (215)
494 1f0y_A HCDH, L-3-hydroxyacyl-C 85.9 0.56 1.9E-05 50.9 4.6 33 463-501 16-48 (302)
495 4dll_A 2-hydroxy-3-oxopropiona 85.9 0.6 2E-05 51.3 4.9 126 60-196 16-152 (320)
496 3un1_A Probable oxidoreductase 85.9 1.5 5E-05 46.4 7.8 57 458-522 24-81 (260)
497 2rir_A Dipicolinate synthase, 85.9 0.58 2E-05 50.9 4.8 36 459-500 154-189 (300)
498 3qha_A Putative oxidoreductase 85.9 0.58 2E-05 50.7 4.8 34 75-109 15-48 (296)
499 1lld_A L-lactate dehydrogenase 85.8 0.62 2.1E-05 50.8 5.0 35 462-500 7-41 (319)
500 1r6d_A TDP-glucose-4,6-dehydra 85.8 4.8 0.00016 43.6 12.2 102 77-199 2-132 (337)
No 1
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-202 Score=1871.27 Aligned_cols=920 Identities=47% Similarity=0.846 Sum_probs=871.7
Q ss_pred hhhhhhccccchhcccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchH
Q psy7300 51 QDIDEGLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNR 130 (986)
Q Consensus 51 ~~i~~~~y~Rqi~l~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~K 130 (986)
.+++++|||||+++||.++|+||++++|+|+|+||||+++||||+++|||+|+|+|+|.|+.+||+||||++.+|||++|
T Consensus 3 ~~id~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~K 82 (1015)
T 3cmm_A 3 GEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKR 82 (1015)
T ss_dssp CCCCHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBH
T ss_pred hhhhhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCEEEeecCCCCHhhhccccEEEEecC-CHHHHHHHHHHHHHcCCcEEEeecccceEEEEeecCCce
Q psy7300 131 AEVSHTNLSQLNPYVSTKAYTGELSEAFIKKFRVVVLTNS-TYDEQLAISQITHANDIALIIADTRGLFAQVFCDFGNNF 209 (986)
Q Consensus 131 a~a~~~~L~~lNp~V~v~~~~~~~~~~~l~~~dvVI~~~~-~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~d~g~~f 209 (986)
|++++++|+++||+|+|+++...++++++++||+||+|.+ +.+.+..|+++|+++++|||++++.|++|++|+|+|+||
T Consensus 83 a~a~~~~L~~lNP~v~v~~~~~~l~~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~d~~~~~ 162 (1015)
T 3cmm_A 83 GDVTRAKLAELNAYVPVNVLDSLDDVTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVDLGDEF 162 (1015)
T ss_dssp HHHHHHHHTTSCTTSCEEECCCCCCSTTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEECCSCE
T ss_pred HHHHHHHHHHHCCCCeEEEecCCCCHHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEEEecCCCce
Confidence 9999999999999999999999998899999999999999 999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCceeEEeceecccCcccccccccccCCCCCceEEEEeeccccccCCCCCeeeEEeCceeeecCCccccccc
Q psy7300 210 TVVDTTGENPVSVIIAGVTREAEGVVTCLDETRHGFEDGDYVTFSEVQGMTQLNGIEPRKVKVLGPYTFSIGDTTKFDEY 289 (986)
Q Consensus 210 ~v~~~~~e~p~~~~i~~i~~~~~~~v~~~~~~~h~~~~gd~v~f~ev~g~~~~n~~~~~~i~~~~~~~~~i~d~~~f~~y 289 (986)
.|+++++++|.++++.+| +.++.+++++..+|++++|+++.|++++||.++|++++.++++.+|++|.|+|++.|.+|
T Consensus 163 ~c~~~~~~~p~~~~i~~i--~~p~~v~~l~~~~h~~~~gd~v~F~ev~gm~elN~~e~~~i~~~~p~~f~I~Dts~~~~y 240 (1015)
T 3cmm_A 163 TVLDPTGEEPRTGMVSDI--EPDGTVTMLDDNRHGLEDGNFVRFSEVEGLDKLNDGTLFKVEVLGPFAFRIGSVKEYGEY 240 (1015)
T ss_dssp EESBSSCCCCCEEEEEEE--CTTCEEEESTTCCCCCCTTCEEEEECCBTSGGGGSSCCEECEEEETTEEECSCCTTTCCC
T ss_pred EEeeCCCCCCccccccCC--CCCceeEeeecccccCCCCCeEEEEeeccchhhcCccceeeEEcCCceeEecccchhhhh
Confidence 999999999999999999 557899999999999999999999999999999999999999999999999999999999
Q ss_pred eecceeeEecCCccccCCChHhhhcCCccccccccccCCchhHHHHHHHHHHHHHHh-CCCCCCCCHHhHHHHHHHHHHh
Q psy7300 290 VSGGIATQVKQPKILKFLPLPEALQQPEFVMTDFAKFESPANLHVAFSTLHNFVKSF-GYAPKPWNSADADQFLALAKES 368 (986)
Q Consensus 290 ~~gg~~~qvk~p~~i~f~sL~~~l~~p~~~~~d~~k~~~~~~l~~~~~al~~F~~~~-gr~P~~~~~~D~~~~~~l~~~~ 368 (986)
++||.++|+|.|++++|++|++++.+|.++.+++.++.++.++|++||||++|+++| ||+|.+++.+|++++.++++++
T Consensus 241 v~~g~~~qvk~p~~i~f~~l~~~l~~p~~l~~d~~k~~~~~~l~~~~~Al~~F~~~~~gr~P~~~~~~D~~~l~~~a~~~ 320 (1015)
T 3cmm_A 241 KKGGIFTEVKVPRKISFKSLKQQLSNPEFVFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPRTMNDEDANELIKLVTDL 320 (1015)
T ss_dssp CBCCEEEECCCCEEECCCCHHHHHHSCCBCCSCGGGTHHHHHHHHHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHH
T ss_pred hcCceeEEecCCcccCHHHHHHHHcChHHHHHHHhccCcchHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988889999889999999999999999999 9999999999999999999998
Q ss_pred hhcC-------CCccHHHHHHHHHhhcCCCCchhhhhhchhHHHHHHhhhCCCccccccccccchhhhcc----cccccc
Q psy7300 369 KLNN-------GELDEKLLQLFAKTAAGNCNPVNAVIGGIVAQEVMKACSGKFHPIFQWLYFDAVECIDE----NIAETD 437 (986)
Q Consensus 369 ~~~~-------~~ide~lv~~~~~~~~~el~pvaA~iGGi~AQEvIKaiT~kf~Pi~q~~~fD~~e~l~~----~~~~~~ 437 (986)
..+. .+++++++++|+++++++|||||||+||+|||||||+|||||+||+||||||++++++. .+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~el~pvaA~iGGivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~~~~~ 400 (1015)
T 3cmm_A 321 SVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPRNEKT 400 (1015)
T ss_dssp HHHCHHHHCTTCCCCHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCCSTTT
T ss_pred HHhcCCCccccccCcHHHHHHHHHhcCcccCcHHHHhcchHHHHHHHHhccCCCcccceEEecchhhccccccCCCChhh
Confidence 7521 36899999999999999999999999999999999999999999999999999999972 468888
Q ss_pred cccccCccchhhhccCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCC
Q psy7300 438 AIVNGSRYEGQVAIFGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHD 517 (986)
Q Consensus 438 ~~~~~~rydrqi~~~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~d 517 (986)
+.|.++||+||+++||.++|++|+++||+||||||+||++|++||++|||+|+.|+|+|+|+|+|+.|||||||||+.+|
T Consensus 401 ~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~d 480 (1015)
T 3cmm_A 401 TQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKD 480 (1015)
T ss_dssp TSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGG
T ss_pred ccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhh
Confidence 88989999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHhhCCCc--eEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeec
Q psy7300 518 VQQPKSATAAKAIKVMNPNV--NITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTL 595 (986)
Q Consensus 518 iG~~Ka~~a~~~l~~~np~~--~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~ 595 (986)
||++||++|+++++++||++ +|+++..++.++++.+|+++||+++|+||+|+||+++|+++|++|+.+++|+|++|+.
T Consensus 481 vG~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~ 560 (1015)
T 3cmm_A 481 VGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTL 560 (1015)
T ss_dssp TTSBHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCC
Confidence 99999999999999999999 9999999999877777888999999999999999999999999999999999999999
Q ss_pred CCcceEEEEeCCCCccccCCCCCCCCCCCcccccCCCCcchhhHHHHHHHhhhHhhhhHHHHHhhhCChhHHHHhhcCCC
Q psy7300 596 GTKGNSQVVVPHLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDNFEGIFRQSAENAAEYLEDPNFVERVMKLPG 675 (986)
Q Consensus 596 G~~G~v~~~~p~~t~cy~c~~~~~~~~~p~Ctl~~~P~~~~h~i~wa~~~F~~~F~~~~~~~~~~l~~~~~~~~~~~~~~ 675 (986)
|+.|++++++|+.|+||+|..+|+++++|.||+++||+.++|||+|||++|+++|++.++++++|++||+|.+++.+..+
T Consensus 561 G~~G~v~v~~p~~t~cy~c~~dp~~~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~~~~~~~~~l~~~~~~~~~~~~~~ 640 (1015)
T 3cmm_A 561 GTKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTDSAENVNMYLTQPNFVEQTLKQSG 640 (1015)
T ss_dssp TTEEEEEEECTTTBCCGGGSCCCCCCCCCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHHHCTTHHHHHHC---
T ss_pred ccccceEEEeCCCCCccCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHHHHhhhhhhhhhhccCchhHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877665
Q ss_pred CCchhhHHHHHHhhhccCCCChhHhHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCcCCCCCCCCccccCCCCCcc
Q psy7300 676 SQPLEMLENVKHALVDERPLNIKDCVAWARNHWQDQYNNQIRQLLFNFPPEQVTSSGQPFWSGPKRCPKPLEFDVTDPLH 755 (986)
Q Consensus 676 ~~~~~~l~~~~~~l~~~~p~~~~~c~~~a~~~f~~~F~~~I~~ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~h 755 (986)
.+. +.|+.+++.| ..+|++|++|++||+.+|+++|+++|+|||++||+|++|++|+|||+++||||+||+||++|++|
T Consensus 641 ~~~-~~l~~~~~~l-~~~~~~~~~c~~~a~~~f~~~F~~~I~~Ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~h 718 (1015)
T 3cmm_A 641 DVK-GVLESISDSL-SSKPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDH 718 (1015)
T ss_dssp CCH-HHHHHHHHHH-HSCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCSTTCBSSCTTCCCCCCCCCCTTSHHH
T ss_pred hhH-HHHHHHHHHh-hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCcccccCCCCCCCCcccCCCCHHH
Confidence 553 7788888887 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhHHHHHHHhCCCC-----CCcHHHHHHHHhccccCcccCCCCCceecchhhhhccCCCc-hHHHHHHHHhhCcc
Q psy7300 756 LQYIYTGANLKAELYGIPQ-----VRNLDAIAQMVKQVVVPEFTPKSGVTIAVTDAQLQNSNGDY-DQDRLGQLKNELPS 829 (986)
Q Consensus 756 ~~fi~~~a~l~a~~~~i~~-----~~d~~~~~~~~~~~~~~~f~~~~~~~i~~~~~~~~~~~~~~-d~~~~~~l~~~l~~ 829 (986)
++||.++|+|+|++|||++ ..|.+.+.++++++.+|+|.|++|+||..+|++.++.+.+. +.+.+++|..+|++
T Consensus 719 ~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 798 (1015)
T 3cmm_A 719 FHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLVSSLPD 798 (1015)
T ss_dssp HHHHHHHHHHHHHHHTCCCSSTTSSCCHHHHHHHHTTCCCCCCCCCSSCCCCSSTTSSCC---------CCHHHHTTSCC
T ss_pred HHHHHHHHHhHHHhcCCCCccccccCCHHHHHHHHhhCcCCCcCCccCceeccchhhhcccccccccHHHHHHHHHHhcc
Confidence 9999999999999999997 46899999999999999999999999999888765443333 45667889999988
Q ss_pred hhhccCCccccceecccCCCchhhHHHHHHhhhhhhccCCCCCChhhHhhhhCCcccccchhhhHHhhhhhhhhc--cCc
Q psy7300 830 IQELQGLHITPLEFEKDDDTNLHMDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVSKKKI--EPH 907 (986)
Q Consensus 830 ~~~~~~~~~~~~~FeKDDd~n~hidFi~aasNLRa~ny~I~~~~~~~~k~iAG~IIPAiaTTtA~VaGl~~lEl~--~~~ 907 (986)
+....+.++.|++||||||+|+|||||+|||||||+||+||++|||++|+|||||||||||||||||||+|+|+| ++|
T Consensus 799 ~~~~~~~~~~~~~FeKDDd~n~h~dFi~aasNlRa~ny~I~~~~~~~~k~iaG~IIPAIaTT~AivaGl~~lE~~K~~~~ 878 (1015)
T 3cmm_A 799 PSTLAGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDN 878 (1015)
T ss_dssp GGGGTTCCCCCCCCCTTCTTSSHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred chhcccCCCCceeeecCCCchhHHHHHHHHHHHHHHHcCCCccCHHHHHHHhCCcCccchhHHHHHHHHHHHHHHHHHhc
Confidence 776667789999999999999999999999999999999999999999999999999999999999999999999 677
Q ss_pred cccceeeccccCCCCCccccce--eeccccccc--CCCCCccccCcee-eeeeEEEeCCCCCHHHHHHHHHHHcCCeEEE
Q psy7300 908 VRALVFELCCQDESGEDVETTI--VAVVAYCWS--KGAPKLKYYDVEW-TLWDRFEINQEMTLKQFLDYFQNEHKLEITI 982 (986)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~rn~f--la~p~~~~~--~~~~~~~~~~~~~-t~wd~~~~~~~~tl~~~~~~~~~~~~~~~~~ 982 (986)
+++++ .|||+| ||+|++.++ .+||+++|++++| |+||||+++++|||++|+++|+++||++++|
T Consensus 879 ~~~~~-----------~~kn~f~nla~~~~~~~~p~~~~~~~~~~~~~~t~wd~~~v~~~~Tl~~li~~~~~~~~~~~~~ 947 (1015)
T 3cmm_A 879 KTDIE-----------QYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITM 947 (1015)
T ss_dssp CCCGG-----------GCCEEEEETTTTEEEEECCCBCCEEEETTEEEETTTCEEEEESCCBHHHHHHHHHHTTCCEEEE
T ss_pred ccchh-----------hhhhHHHhccCCceeecCCCCCCCCCCCCCCCCeEEEEEEECCCCcHHHHHHHHHHHhCCccee
Confidence 77788 999999 899999998 7788888999999 9999999999999999999999999999999
Q ss_pred EEe
Q psy7300 983 LLL 985 (986)
Q Consensus 983 ~~~ 985 (986)
|++
T Consensus 948 i~~ 950 (1015)
T 3cmm_A 948 LSY 950 (1015)
T ss_dssp EEE
T ss_pred ecc
Confidence 975
No 2
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=2e-95 Score=866.25 Aligned_cols=461 Identities=26% Similarity=0.401 Sum_probs=371.7
Q ss_pred hhhccCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHH
Q psy7300 448 QVAIFGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAA 527 (986)
Q Consensus 448 qi~~~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~ 527 (986)
|+++||.++|++|++++|+||||||+||++|++||++|| |+|+|+|+|+|+.|||+|||||+.+|||++||++|+
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGV-----G~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa 77 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGF-----SHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAK 77 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHH
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHH
Confidence 899999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCCcceEEEEeCC
Q psy7300 528 KAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGTKGNSQVVVPH 607 (986)
Q Consensus 528 ~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~~G~v~~~~p~ 607 (986)
++++++||+++|+++..++.+. .++.+|+.++|+||+|+||+++|++++++|+.+++|+|++|+.|+.|++++++|+
T Consensus 78 ~~L~~iNP~v~V~a~~~~i~~~---~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 78 ESVLQFYPKANIVAYHDSIMNP---DYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp HHHHTTCTTCEEEEEESCTTST---TSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTT
T ss_pred HHHHHHCCCCeEEEEecccchh---hhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCC
Confidence 9999999999999999988642 3456899999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCCCCCcccccCCCCcchhhHHHHHHHhhhHhhhhH--HHHHhhhCChhH-HHHhhcCCCCCchhhHHH
Q psy7300 608 LTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDNFEGIFRQSA--ENAAEYLEDPNF-VERVMKLPGSQPLEMLEN 684 (986)
Q Consensus 608 ~t~cy~c~~~~~~~~~p~Ctl~~~P~~~~h~i~wa~~~F~~~F~~~~--~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~ 684 (986)
.|+||+|..+|+++++|.||++++|+.++|||+||+++|+++|++.+ ++++.++.+|.. .++.......+..+.++.
T Consensus 155 ~t~Cy~C~~~p~~~~~p~Cti~~~p~~~~hci~~a~~~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (640)
T 1y8q_B 155 VTECYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPTEAEARARASNEDGD 234 (640)
T ss_dssp TSCCTTSSCCCCCCCCCTTTTTSCCCSHHHHHHHHHHHHHHHHSCCCGGGCCSCCTTCTTSCCC----------------
T ss_pred CCCCcccCCCCCCcccceeeecCCCCchHHHHHHHHHHHHHHhCCcchhhhhcccccchhhhhhhhhhhhhhhhhhhhhH
Confidence 99999999888889999999999999999999999999999999876 234445666531 111111111122233344
Q ss_pred HHHhhhccCCCChhHhHHHHHH-HHHHHHHHHHHHHHhcCCcccccCCCCCCcCCCCCCCCccccCCCCCcchhhHhhhH
Q psy7300 685 VKHALVDERPLNIKDCVAWARN-HWQDQYNNQIRQLLFNFPPEQVTSSGQPFWSGPKRCPKPLEFDVTDPLHLQYIYTGA 763 (986)
Q Consensus 685 ~~~~l~~~~p~~~~~c~~~a~~-~f~~~F~~~I~~ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~h~~fi~~~a 763 (986)
++.. .+++|++|+.||+. +|+++|+++|+|||++ ++||++ ||||+||.||..++.|+... +
T Consensus 235 ~~~~----~~~~~~~~~~~a~~~~f~k~F~~~I~~Ll~~----------~~fW~~-kr~P~pl~fd~~~~~~~~~~---~ 296 (640)
T 1y8q_B 235 IKRI----STKEWAKSTGYDPVKLFTKLFKDDIRYLLTM----------DKLWRK-RKPPVPLDWAEVQSQGEETN---A 296 (640)
T ss_dssp ---------CHHHHHHTTSCHHHHHHHHHTHHHHHHTTC----------GGGCSS-SCCCCCCCHHHHHHC---------
T ss_pred HHHH----hhhhHHHhHhHHHHHHHHHHHhhHHHHHHhC----------cccccC-CCCCCCcccCcccccccccc---c
Confidence 4332 24589999999984 9999999999999987 799999 99999999999888776431 0
Q ss_pred HHHHHHhCCCCCCcHHHHHHHHhccccCccc-CCCCCceecchhhhhccC--CCchHHHHHHHHhhCcchhhccCCcccc
Q psy7300 764 NLKAELYGIPQVRNLDAIAQMVKQVVVPEFT-PKSGVTIAVTDAQLQNSN--GDYDQDRLGQLKNELPSIQELQGLHITP 840 (986)
Q Consensus 764 ~l~a~~~~i~~~~d~~~~~~~~~~~~~~~f~-~~~~~~i~~~~~~~~~~~--~~~d~~~~~~l~~~l~~~~~~~~~~~~~ 840 (986)
+|+|. |+.|. .+++.+... ..++.+++++|...|+... ++.|
T Consensus 297 --------------------------~~~~~~~~~~~----~d~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~ 341 (640)
T 1y8q_B 297 --------------------------SDQQNEPQLGL----KDQQVLDVKSYARLFSKSIETLRVHLAEKG-----DGAE 341 (640)
T ss_dssp ----------------------------------CCC----GGGSCCCHHHHHHHHHHHHHHHHHHHHHTC-----TTCC
T ss_pred --------------------------cccccccccCC----ChhhhcChhhhhhhHHHHHHHHHHHhhhcc-----cCCC
Confidence 01111 11111 111100000 0112445677777665432 4679
Q ss_pred ceecccCCCchhhHHHHHHhhhhhhccCCCCCChhhHhhhhCCcccccchhhhHHhhhhhhhhc--cCccccceeecccc
Q psy7300 841 LEFEKDDDTNLHMDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVSKKKI--EPHVRALVFELCCQ 918 (986)
Q Consensus 841 ~~FeKDDd~n~hidFi~aasNLRa~ny~I~~~~~~~~k~iAG~IIPAiaTTtA~VaGl~~lEl~--~~~~~~~~~~~~~~ 918 (986)
++||||||+ |||||+|||||||+||+||++|||++|+|||||||||||||||||||+|+|+| +++ +++
T Consensus 342 ~~FdKDDd~--h~dFV~aaaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnAiVaGl~~lE~~Kvl~~--~~~------ 411 (640)
T 1y8q_B 342 LIWDKDDPS--AMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSG--KID------ 411 (640)
T ss_dssp CCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTT--CGG------
T ss_pred cccCCCCHH--HHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHHHHHHHHHHHHHHHHhc--cHH------
Confidence 999999986 99999999999999999999999999999999999999999999999999999 544 466
Q ss_pred CCCCCccccce--eecc----ccccc-CCCCCccccCc--eeeeeeEEEeCCCCCHHHHHHHH-HHHcCCeEEEEEe
Q psy7300 919 DESGEDVETTI--VAVV----AYCWS-KGAPKLKYYDV--EWTLWDRFEINQEMTLKQFLDYF-QNEHKLEITILLL 985 (986)
Q Consensus 919 ~~~~~~~rn~f--la~p----~~~~~-~~~~~~~~~~~--~~t~wd~~~~~~~~tl~~~~~~~-~~~~~~~~~~~~~ 985 (986)
.|||+| ||.| ++.++ +.+|+++|+.+ .|+.|++|+++ +|||++|+++| +++||++++||++
T Consensus 412 -----~~kn~f~n~a~~~~~~~~~~~~p~~p~~~c~vc~~~~~~~~~~~~~-~~TL~~li~~~~~~~~~l~~~~is~ 482 (640)
T 1y8q_B 412 -----QCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVH-KVTVLTLQDKIVKEKFAMVAPDVQI 482 (640)
T ss_dssp -----GCEEEEECSSCCTTSEEEEEEECCCCCTTCTTTSSSCEEEEEECTT-TCBHHHHHHCCCCCCTCCSSCEEEE
T ss_pred -----hhhhhheeeccCCCCcEEeecccCCCCCCCcccCCccEEEEEEeCC-CCcHHHHHHHHHHHhhCCCCceEEE
Confidence 899999 6888 88888 77888887655 57899988876 99999999995 9999999999985
No 3
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=100.00 E-value=9.5e-72 Score=602.97 Aligned_cols=267 Identities=63% Similarity=1.083 Sum_probs=243.9
Q ss_pred CCCCCCcccccCCCCcchhhHHHHHHHhhhHhhhhHHHHHhhhCChhHHHHhhcCCCCCchhhHHHHHHhhhccCCCChh
Q psy7300 619 PEKSIPICTLKNFPNAIEHTLQWARDNFEGIFRQSAENAAEYLEDPNFVERVMKLPGSQPLEMLENVKHALVDERPLNIK 698 (986)
Q Consensus 619 ~~~~~p~Ctl~~~P~~~~h~i~wa~~~F~~~F~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~p~~~~ 698 (986)
.++++|+||||+||+.|+|||+|||++|++||++.++++++|++||.|++++.+..+.+.++.|+.+++.|+..+|.+|+
T Consensus 10 ~~ks~P~CTlrsfP~~i~HcI~WAr~lFe~lF~~~~~~~n~~l~dp~~~~~~~~~~~~~~~~~l~~i~~~L~~~~p~~~~ 89 (276)
T 1z7l_A 10 FEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDSKFVERTLRLAGTQPLEVLEAVQRSLVLQRPQTWG 89 (276)
T ss_dssp ----CCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHTTCSHHHHHHHTSSTTHHHHHHHHHHHHHTTTCCSSHH
T ss_pred CCCCCceeccCCCCCChhHHHHHHHHHHHHHHcCCHHHHHHhhcChHHHHHHHhccchhhHHHHHHHHHHHhhcCCCcHH
Confidence 45899999999999999999999999999999999999999999999999988877777778899999988889999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCcCCCCCCCCccccCCCCCcchhhHhhhHHHHHHHhCCCCCCcH
Q psy7300 699 DCVAWARNHWQDQYNNQIRQLLFNFPPEQVTSSGQPFWSGPKRCPKPLEFDVTDPLHLQYIYTGANLKAELYGIPQVRNL 778 (986)
Q Consensus 699 ~c~~~a~~~f~~~F~~~I~~ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~d~ 778 (986)
+|++|||.+|+++|+++|+|||++||+|++|++|+||||||||||+||+||++|++|++||.+||+|+|++|||++..|.
T Consensus 90 ~c~~~Ar~~F~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~~d~ 169 (276)
T 1z7l_A 90 DCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGSQDR 169 (276)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCcccCCCCCceecchhhhhccCCCchHHHHHHHHhhCcchhhccCCccccceecccCCCchhhHHHHH
Q psy7300 779 DAIAQMVKQVVVPEFTPKSGVTIAVTDAQLQNSNGDYDQDRLGQLKNELPSIQELQGLHITPLEFEKDDDTNLHMDFIVA 858 (986)
Q Consensus 779 ~~~~~~~~~~~~~~f~~~~~~~i~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~~~~~~~~~~FeKDDd~n~hidFi~a 858 (986)
+.+.++++++.+|+|.|++|++|.++|++.+..+.+++++++++|..+|++.....+.++.|++||||||+|+|||||+|
T Consensus 170 ~~i~~~~~~~~vp~f~p~~~~ki~~~e~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~pl~FeKDDd~N~hmdFItA 249 (276)
T 1z7l_A 170 AAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVA 249 (276)
T ss_dssp HHHHHHHHTCCCCCCCCCSSCCCCSSSCCC------CCSHHHHHHHHHSCCGGGSTTCCCCCCCCCSSCTTSSHHHHHHH
T ss_pred HHHHHHHhcCCCCCcCCccccccccchhhhchhcccccHHHHHHHHHHhhhhhhcccccCCCcceecCCCcccHHHHHHH
Confidence 99999999999999999999999998887655444456678999999998876666778999999999999999999999
Q ss_pred HhhhhhhccCCCCCChhhHhhhhCCcc
Q psy7300 859 ASNLRAANYGITPADRHTSKLIAGKII 885 (986)
Q Consensus 859 asNLRa~ny~I~~~~~~~~k~iAG~II 885 (986)
||||||+||+||++|||++|+||||||
T Consensus 250 aSNLRA~nY~I~~~dr~~~K~IAG~II 276 (276)
T 1z7l_A 250 ASNLRAENYDISPADRHKSKLIAGKII 276 (276)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHTTC--
T ss_pred HHHHHHHHcCCCcCCHHHHHHHhCCcC
Confidence 999999999999999999999999998
No 4
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=4.9e-64 Score=593.57 Aligned_cols=377 Identities=21% Similarity=0.292 Sum_probs=304.9
Q ss_pred hhhh-hccccchhcccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchH
Q psy7300 52 DIDE-GLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNR 130 (986)
Q Consensus 52 ~i~~-~~y~Rqi~l~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~K 130 (986)
++|+ +||+||+++||.++|++|++++|+|+|+||+|+++||||+++|||+|+|+|+|.|+.+||+||||++++|||++|
T Consensus 8 ~id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 8 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred cccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 5664 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCEEEeecCCCC------HhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccceEEEEee
Q psy7300 131 AEVSHTNLSQLNPYVSTKAYTGELS------EAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGLFAQVFCD 204 (986)
Q Consensus 131 a~a~~~~L~~lNp~V~v~~~~~~~~------~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~d 204 (986)
|++++++|+++||+|+|+++...++ ++++++||+||+|.|+.+.+..++++|+++++|||++++.|++|+++++
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~~ 167 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRII 167 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEEEE
Confidence 9999999999999999999887663 4788999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEcCCCCCCce------------eEEece-----e----cccCccc---ccccc--ccc-CCCCC---ceEEEE
Q psy7300 205 FGNNFTVVDTTGENPVS------------VIIAGV-----T----REAEGVV---TCLDE--TRH-GFEDG---DYVTFS 254 (986)
Q Consensus 205 ~g~~f~v~~~~~e~p~~------------~~i~~i-----~----~~~~~~v---~~~~~--~~h-~~~~g---d~v~f~ 254 (986)
++ .|.+++.+++.+.. ..+.++ + ...++++ ..++. ..| +..|. +++.|+
T Consensus 168 ~p-~~~~~d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~~g~~P~~~~~~~~f~ 246 (531)
T 1tt5_A 168 IK-EHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFR 246 (531)
T ss_dssp CS-CEEESCCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTTCCCCCCHHHHHHHHH
T ss_pred cC-CceeccCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Confidence 99 58999887764322 111111 1 1223444 23333 223 11121 677888
Q ss_pred ee--ccc----cccCCCCC--------------------------eeeEEe----------------------Cceeeec
Q psy7300 255 EV--QGM----TQLNGIEP--------------------------RKVKVL----------------------GPYTFSI 280 (986)
Q Consensus 255 ev--~g~----~~~n~~~~--------------------------~~i~~~----------------------~~~~~~i 280 (986)
++ .|| .+.|..++ .+++.. .|++++|
T Consensus 247 ~~i~~~~~~~~~e~N~~Ea~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~s~~Fwil~~alk~F~~~~~~g~lPl~g~i 326 (531)
T 1tt5_A 247 DLIRQGILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTI 326 (531)
T ss_dssp HHHHHTTSSCTTHHHHHHHHHHHHHHSCCCCCCHHHHHHHTSHHHHSCCSSCCHHHHHHHHHHHHHHTTTTTSCCCCCCC
T ss_pred HHHHhhcccCccccchHHHHHHHHhhcCCccCcHHHHHHhcccccccccCCCchHHHHHHHHHHHHHhcCCCCCCCCCcc
Confidence 87 666 23332111 111111 3788889
Q ss_pred CC-ccccccceec--------------------ceeeEecC-CccccC------------------CChHhhhcCCcc--
Q psy7300 281 GD-TTKFDEYVSG--------------------GIATQVKQ-PKILKF------------------LPLPEALQQPEF-- 318 (986)
Q Consensus 281 ~d-~~~f~~y~~g--------------------g~~~qvk~-p~~i~f------------------~sL~~~l~~p~~-- 318 (986)
+| ++.+..|+++ |++++++. |..++| ++|.+.+..|..
T Consensus 327 pDm~s~t~~Y~~lq~iy~~ka~~D~~~v~~~v~~~~~~~~~~~~~i~~~~i~~f~kn~~~l~~i~~~~l~~~~~~~~~~~ 406 (531)
T 1tt5_A 327 PDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINK 406 (531)
T ss_dssp CCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSSSCHHHHHHHHHTGGGCEEECCCCHHHHHSTTTSCH
T ss_pred CccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCHHHHHHHHhchhhhhcccccchHhhhccccchh
Confidence 98 4555667655 34445555 555554 455555555432
Q ss_pred --ccccccccCCchhHHHHHHHHHHHHHHhCCCCCCCC---HHhHHHHHHHHHHhhhc---CCCccHHHHHHHHHhhcCC
Q psy7300 319 --VMTDFAKFESPANLHVAFSTLHNFVKSFGYAPKPWN---SADADQFLALAKESKLN---NGELDEKLLQLFAKTAAGN 390 (986)
Q Consensus 319 --~~~d~~k~~~~~~l~~~~~al~~F~~~~gr~P~~~~---~~D~~~~~~l~~~~~~~---~~~ide~lv~~~~~~~~~e 390 (986)
+.+++.++.++.++|++|+||++|.++|||+|++++ .+|++++.++++++... .+.++++++++|+|+++++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~al~~f~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~r~~~~e 486 (531)
T 1tt5_A 407 DEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAE 486 (531)
T ss_dssp HHHHHHTTSTTSTHHHHHHHHHHHHHHHHHSSCTTCSTTTHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHTTTCC
T ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHhCCCCCccccchHHHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHhcCCC
Confidence 566777888899999999999999999999999887 79999999999987652 2358899999999999999
Q ss_pred CCchhhhhhchhHHHHHHhhhCCCccccccccccchhhh
Q psy7300 391 CNPVNAVIGGIVAQEVMKACSGKFHPIFQWLYFDAVECI 429 (986)
Q Consensus 391 l~pvaA~iGGi~AQEvIKaiT~kf~Pi~q~~~fD~~e~l 429 (986)
|||||||+||+|||||||+|||||+||+|||||||+++.
T Consensus 487 l~pvaA~~GGi~AQEviK~iT~q~~Pi~n~~~fDg~~~~ 525 (531)
T 1tt5_A 487 PHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQT 525 (531)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCSBCCCSCEEEETTTTE
T ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCCce
Confidence 999999999999999999999999999999999999874
No 5
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=6.8e-59 Score=524.87 Aligned_cols=313 Identities=30% Similarity=0.430 Sum_probs=264.3
Q ss_pred hhhhhccccchhcccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHH
Q psy7300 52 DIDEGLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRA 131 (986)
Q Consensus 52 ~i~~~~y~Rqi~l~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka 131 (986)
+.+.+|||||+++||.++|++|++++|+|+|+||+|+++||||+++|||+|+|+|+|.|+++||+||||++++|||++||
T Consensus 13 ~~~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka 92 (346)
T 1y8q_A 13 EEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRA 92 (346)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCEEEeecCCC---CHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccceEEEEeecCCc
Q psy7300 132 EVSHTNLSQLNPYVSTKAYTGEL---SEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGLFAQVFCDFGNN 208 (986)
Q Consensus 132 ~a~~~~L~~lNp~V~v~~~~~~~---~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~d~g~~ 208 (986)
++++++|+++||+|+|+++...+ .++++++||+||+|.++.+.+..|+++|+++++|||++++.|++|++|+|+|++
T Consensus 93 ~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~~d~~~~ 172 (346)
T 1y8q_A 93 EASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLGEH 172 (346)
T ss_dssp HHHHHHHHHTCTTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEEEECSEE
T ss_pred HHHHHHHHhHCCCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEEEecCCC
Confidence 99999999999999999998776 467899999999999999999999999999999999999999999999999987
Q ss_pred eEEEcCCCC--CCceeEEeceecccCcccccccccccCCCCCceEEEEeecccccc-CCCCCeeeEEeCceeeecCCccc
Q psy7300 209 FTVVDTTGE--NPVSVIIAGVTREAEGVVTCLDETRHGFEDGDYVTFSEVQGMTQL-NGIEPRKVKVLGPYTFSIGDTTK 285 (986)
Q Consensus 209 f~v~~~~~e--~p~~~~i~~i~~~~~~~v~~~~~~~h~~~~gd~v~f~ev~g~~~~-n~~~~~~i~~~~~~~~~i~d~~~ 285 (986)
+.+.+..++ .|. |.+. +++++.++ |++
T Consensus 173 ~~~~~~~~~~~~p~--------------------------------------~~~~~~~~~~~~~-----------d~~- 202 (346)
T 1y8q_A 173 EFVEEKTKVAKVSQ--------------------------------------GVEDGPDTKRAKL-----------DSS- 202 (346)
T ss_dssp EEEEECC-------------------------------------------------------------------------
T ss_pred CEEEcCCCCcCCCc--------------------------------------ccccCCCCCcccc-----------cCC-
Confidence 666665442 111 0000 11111111 111
Q ss_pred cccceecceeeEecCCccccCCChHhhhcCCccccccc-cccCCchhHHHHHHHHHHHHHHhCCCCCC-CCHHhHHHHHH
Q psy7300 286 FDEYVSGGIATQVKQPKILKFLPLPEALQQPEFVMTDF-AKFESPANLHVAFSTLHNFVKSFGYAPKP-WNSADADQFLA 363 (986)
Q Consensus 286 f~~y~~gg~~~qvk~p~~i~f~sL~~~l~~p~~~~~d~-~k~~~~~~l~~~~~al~~F~~~~gr~P~~-~~~~D~~~~~~ 363 (986)
.+++.|++++|.+|++++..|... .++ .+..++.++|++++||++|+++|+|+|.+ ++.+|++++++
T Consensus 203 ----------~~~~~~~~~~f~~l~~~~~~~~~~-~~~~~~~~r~~~~~~~~~al~~f~~~~~~~P~~~~~~~d~~~l~~ 271 (346)
T 1y8q_A 203 ----------ETTMVKKKVVFCPVKEALEVDWSS-EKAKAALKRTTSDYFLLQVLLKFRTDKGRDPSSDTYEEDSELLLQ 271 (346)
T ss_dssp ----------CCCEEEEEEECCCHHHHTSCCSCS-HHHHHHHTTSCTHHHHHHHHHHHHHHSSSCCCGGGHHHHHHHHHH
T ss_pred ----------ceEEEeceeeccCHHHHhcCCchh-hhhhhhcccccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 345668889999999999887531 112 34678889999999999999999999974 67899999999
Q ss_pred HHHHhhhcC----CCccHHHHHHHHHhhcCCCCchhhhhhchhHHHHHHhhhCCCccccccccccchhhh
Q psy7300 364 LAKESKLNN----GELDEKLLQLFAKTAAGNCNPVNAVIGGIVAQEVMKACSGKFHPIFQWLYFDAVECI 429 (986)
Q Consensus 364 l~~~~~~~~----~~ide~lv~~~~~~~~~el~pvaA~iGGi~AQEvIKaiT~kf~Pi~q~~~fD~~e~l 429 (986)
+++++.... ..+++++++++ .++|+|||||+||++||||||+|||||+||+|||||||++++
T Consensus 272 ~a~~~~~~~~~~~~~~~~~~~~~~----~~~l~pv~AiiGGi~aQEviK~it~k~~Pl~n~~~fD~~~~~ 337 (346)
T 1y8q_A 272 IRNDVLDSLGISPDLLPEDFVRYC----FSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGN 337 (346)
T ss_dssp HHHHHHHTTTCCGGGSCGGGGGSS----CSBCHHHHHHHHHHHHHHHHHHHHTBSCCCCSEEEEETTTTE
T ss_pred HHHHHHHhcCCCcccCCHHHHHHh----cCCccHHHHHHHHHHHHHHHHHhcCCCcccccEEEEEccccc
Confidence 999976532 13666776654 899999999999999999999999999999999999999986
No 6
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=1.5e-52 Score=483.73 Aligned_cols=323 Identities=31% Similarity=0.529 Sum_probs=262.2
Q ss_pred CHHHHH-HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHH
Q psy7300 453 GKNFQE-KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIK 531 (986)
Q Consensus 453 G~~~q~-~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~ 531 (986)
|.+.++ .|++++|+||||||+||+++++||++|| |+|+|+|+|+|+.|||+|||||+.+|||++||++|+++++
T Consensus 30 g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGv-----g~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~ 104 (434)
T 1tt5_B 30 STESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLN 104 (434)
T ss_dssp CSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTC-----CCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred CHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHH
Confidence 334455 5599999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred hhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHc------------CCcEEEEeecCCcc
Q psy7300 532 VMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYS------------RKPLLESGTLGTKG 599 (986)
Q Consensus 532 ~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~------------~~pli~~g~~G~~G 599 (986)
++||+++|+++..++.+. +.++++++|+||+|+||+++|+++|+.|+.+ ++|+|++|+.|+.|
T Consensus 105 ~lnp~v~v~~~~~~i~~~-----~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~~g~~G 179 (434)
T 1tt5_B 105 DRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKG 179 (434)
T ss_dssp HHSTTCCCEEEESCGGGB-----CHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEEETTEE
T ss_pred hhCCCCEEEEEecccchh-----hHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEecccccee
Confidence 999999999999988642 3578999999999999999999999999984 99999999999999
Q ss_pred eEEEEeCCCCccccCCCC--CCCCCCCcccccCCCCcchhhHHHHHHHhhhHhhhhHHHHHhhhCChhHHHHhhcCCCCC
Q psy7300 600 NSQVVVPHLTESYSSSQD--PPEKSIPICTLKNFPNAIEHTLQWARDNFEGIFRQSAENAAEYLEDPNFVERVMKLPGSQ 677 (986)
Q Consensus 600 ~v~~~~p~~t~cy~c~~~--~~~~~~p~Ctl~~~P~~~~h~i~wa~~~F~~~F~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (986)
++.+++|+.++||.|..+ |++..+|+||++++|..++|||+||+.+
T Consensus 180 ~v~v~~p~~t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i-------------------------------- 227 (434)
T 1tt5_B 180 NARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML-------------------------------- 227 (434)
T ss_dssp EEEEECTTTSCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT--------------------------------
T ss_pred EEEEECCCCCCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHH--------------------------------
Confidence 999999999999999643 6678899999999999999999998752
Q ss_pred chhhHHHHHHhhhccCCCChhHhHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCcCCCCCCCCccccCCCCCcchh
Q psy7300 678 PLEMLENVKHALVDERPLNIKDCVAWARNHWQDQYNNQIRQLLFNFPPEQVTSSGQPFWSGPKRCPKPLEFDVTDPLHLQ 757 (986)
Q Consensus 678 ~~~~l~~~~~~l~~~~p~~~~~c~~~a~~~f~~~F~~~I~~ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~h~~ 757 (986)
.|++ + .|.
T Consensus 228 -----------------------------~~~~-----------------------------~-~~~------------- 235 (434)
T 1tt5_B 228 -----------------------------QWPK-----------------------------E-QPF------------- 235 (434)
T ss_dssp -----------------------------HHHH-----------------------------S-CTT-------------
T ss_pred -----------------------------HHhh-----------------------------h-ccc-------------
Confidence 0110 0 000
Q ss_pred hHhhhHHHHHHHhCCCCCCcHHHHHHHHhccccCcccCCCCCceecchhhhhccCCCchHHHHHHHHhhCcchhhccCCc
Q psy7300 758 YIYTGANLKAELYGIPQVRNLDAIAQMVKQVVVPEFTPKSGVTIAVTDAQLQNSNGDYDQDRLGQLKNELPSIQELQGLH 837 (986)
Q Consensus 758 fi~~~a~l~a~~~~i~~~~d~~~~~~~~~~~~~~~f~~~~~~~i~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~~~~~ 837 (986)
T Consensus 236 -------------------------------------------------------------------------------- 235 (434)
T 1tt5_B 236 -------------------------------------------------------------------------------- 235 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceecccCCCchhhHHHHHHhhhhhhccCCCCCChhhHhhhhCCcccccchhhhHHhhhhhhhhc--cCccc-cceee
Q psy7300 838 ITPLEFEKDDDTNLHMDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVSKKKI--EPHVR-ALVFE 914 (986)
Q Consensus 838 ~~~~~FeKDDd~n~hidFi~aasNLRa~ny~I~~~~~~~~k~iAG~IIPAiaTTtA~VaGl~~lEl~--~~~~~-~~~~~ 914 (986)
..|+.||+||. .|++||++++|+||..|+|+..+++.++.++|+||||||||||+|+|++++|++ +.|.. ++.
T Consensus 236 ~~~~~~d~d~~--~~~~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g~~~~l~-- 311 (434)
T 1tt5_B 236 GEGVPLDGDDP--EHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLN-- 311 (434)
T ss_dssp CTTCCCCTTCH--HHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTCSCCCC--
T ss_pred ccccccCCCcH--HHHHHHHHHHHHHHHHcCCCccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhCCCcccC--
Confidence 01234777765 499999999999999999999999999999999999999999999999999999 44432 222
Q ss_pred ccccCCCCCccccce--eeccccccc-CCCCCccccCceeeeeeEEEeCCCCCHHHHHHHHHHH--cCCeEEEEEe
Q psy7300 915 LCCQDESGEDVETTI--VAVVAYCWS-KGAPKLKYYDVEWTLWDRFEINQEMTLKQFLDYFQNE--HKLEITILLL 985 (986)
Q Consensus 915 ~~~~~~~~~~~rn~f--la~p~~~~~-~~~~~~~~~~~~~t~wd~~~~~~~~tl~~~~~~~~~~--~~~~~~~~~~ 985 (986)
.| -.| +... +... .-++++.|..|. +.|++++++.++||++|+++|.++ ++++..||++
T Consensus 312 ---------~~-l~~d~~~~~-~~~~~~~~~~~~C~vC~-~~~~~~~~~~~~tl~~~~~~l~~~~~~~~~~~~is~ 375 (434)
T 1tt5_B 312 ---------NY-LVFNDVDGL-YTYTFEAERKENCPACS-QLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITA 375 (434)
T ss_dssp ---------SE-EEEECSBSC-EEEEECCCCCTTCTTTC-SSCBCCCC-----CTTHHHHHHHCSSCCCSSCCCEE
T ss_pred ---------ce-EEEEcCCCc-eeEEEeccCCCCCCccC-CCCceEEECCCccHHHHHHHHhccCccceEccEEEE
Confidence 11 112 1111 1111 234566676664 578889998889999999999885 5577766653
No 7
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=1.2e-48 Score=489.08 Aligned_cols=333 Identities=30% Similarity=0.503 Sum_probs=276.5
Q ss_pred CccchhhhccCHHHHHHH-hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCc
Q psy7300 443 SRYEGQVAIFGKNFQEKL-GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQP 521 (986)
Q Consensus 443 ~rydrqi~~~G~~~q~~L-~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~ 521 (986)
.+|...--.+|.+.|+++ +++||+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+|||||+.+|||++
T Consensus 391 g~~~~~~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gv-----g~i~l~D~d~v~~snl~rq~~~~~~~vg~~ 465 (805)
T 2nvu_B 391 GPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 465 (805)
T ss_dssp CTTSCTTCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSB
T ss_pred CCCCCcccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CcEEEECCCeecccccccccccchhhcCCh
Confidence 344444445899999988 99999999999999999999999999 899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHc------------CCcE
Q psy7300 522 KSATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYS------------RKPL 589 (986)
Q Consensus 522 Ka~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~------------~~pl 589 (986)
|+++|+++++++||+++|+++..++.+. +.++++++|+||+|+||+++|+++|+.|+.+ ++|+
T Consensus 466 Ka~~~~~~l~~~np~~~v~~~~~~~~~~-----~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~ 540 (805)
T 2nvu_B 466 KAEVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPL 540 (805)
T ss_dssp HHHHHHHHHHHHSTTCEEEEEESCGGGS-----CHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCE
T ss_pred HHHHHHHHHHHHCCCCEEEEEecccccc-----HHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcE
Confidence 9999999999999999999999998642 3578999999999999999999999999984 9999
Q ss_pred EEEeecCCcceEEEEeCCCCccccCCC--CCCCCCCCcccccCCCCcchhhHHHHHHHhhhHhhhhHHHHHhhhCChhHH
Q psy7300 590 LESGTLGTKGNSQVVVPHLTESYSSSQ--DPPEKSIPICTLKNFPNAIEHTLQWARDNFEGIFRQSAENAAEYLEDPNFV 667 (986)
Q Consensus 590 i~~g~~G~~G~v~~~~p~~t~cy~c~~--~~~~~~~p~Ctl~~~P~~~~h~i~wa~~~F~~~F~~~~~~~~~~l~~~~~~ 667 (986)
|++|+.|+.|++.+++|+.++||+|.. .|+...+|.|+++++|..++|||+||+.+
T Consensus 541 i~~~~~g~~G~~~~~~p~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~---------------------- 598 (805)
T 2nvu_B 541 IDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML---------------------- 598 (805)
T ss_dssp EEEEEETTEEEEEEECTTTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT----------------------
T ss_pred EEeccccCceeEEEECCCCCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHh----------------------
Confidence 999999999999999999999999974 36678899999999999999999998652
Q ss_pred HHhhcCCCCCchhhHHHHHHhhhccCCCChhHhHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCcCCCCCCCCccc
Q psy7300 668 ERVMKLPGSQPLEMLENVKHALVDERPLNIKDCVAWARNHWQDQYNNQIRQLLFNFPPEQVTSSGQPFWSGPKRCPKPLE 747 (986)
Q Consensus 668 ~~~~~~~~~~~~~~l~~~~~~l~~~~p~~~~~c~~~a~~~f~~~F~~~I~~ll~~~p~d~~~~~g~~fW~~~kr~P~pl~ 747 (986)
+|+.. + |.
T Consensus 599 ---------------------------------------~~~~~----------------------------~--~~--- 606 (805)
T 2nvu_B 599 ---------------------------------------QWPKE----------------------------Q--PF--- 606 (805)
T ss_dssp ---------------------------------------HHHHH----------------------------C--TT---
T ss_pred ---------------------------------------hcccc----------------------------c--CC---
Confidence 01000 0 00
Q ss_pred cCCCCCcchhhHhhhHHHHHHHhCCCCCCcHHHHHHHHhccccCcccCCCCCceecchhhhhccCCCchHHHHHHHHhhC
Q psy7300 748 FDVTDPLHLQYIYTGANLKAELYGIPQVRNLDAIAQMVKQVVVPEFTPKSGVTIAVTDAQLQNSNGDYDQDRLGQLKNEL 827 (986)
Q Consensus 748 fd~~~~~h~~fi~~~a~l~a~~~~i~~~~d~~~~~~~~~~~~~~~f~~~~~~~i~~~~~~~~~~~~~~d~~~~~~l~~~l 827 (986)
T Consensus 607 -------------------------------------------------------------------------------- 606 (805)
T 2nvu_B 607 -------------------------------------------------------------------------------- 606 (805)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhccCCccccceecccCCCchhhHHHHHHhhhhhhccCCCCCChhhHhhhhCCcccccchhhhHHhhhhhhhhc--c
Q psy7300 828 PSIQELQGLHITPLEFEKDDDTNLHMDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVSKKKI--E 905 (986)
Q Consensus 828 ~~~~~~~~~~~~~~~FeKDDd~n~hidFi~aasNLRa~ny~I~~~~~~~~k~iAG~IIPAiaTTtA~VaGl~~lEl~--~ 905 (986)
..|+.||+||. .|++||++.+|+||..|+|+..+++.++.++|+|||||+||||||+|++++|++ +
T Consensus 607 ----------~~~~~~d~~~~--~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l 674 (805)
T 2nvu_B 607 ----------GEGVPLDGDDP--EHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIA 674 (805)
T ss_dssp ----------STTCCCCTTCH--HHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCcccCCCCCH--HHHHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHH
Confidence 01345777665 499999999999999999999999999999999999999999999999999999 4
Q ss_pred Cccc-cceeeccccCCCCCccccce--eeccccccc-CCCCCccccCceeeeeeEEEeCCCCCHHHHHHHHHHH--cCCe
Q psy7300 906 PHVR-ALVFELCCQDESGEDVETTI--VAVVAYCWS-KGAPKLKYYDVEWTLWDRFEINQEMTLKQFLDYFQNE--HKLE 979 (986)
Q Consensus 906 ~~~~-~~~~~~~~~~~~~~~~rn~f--la~p~~~~~-~~~~~~~~~~~~~t~wd~~~~~~~~tl~~~~~~~~~~--~~~~ 979 (986)
.|.. ++. .+ -.| +... +... .-++++.|..|. +.|++++++.++||++|+++|.++ ++++
T Consensus 675 ~~~~~~l~-----------~~-~~~~~~~~~-~~~~~~~~~~~~C~~C~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (805)
T 2nvu_B 675 TSAYIPLN-----------NY-LVFNDVDGL-YTYTFEAERKENCPACS-QLPQNIQFSPSAKLQEVLDYLTNSASLQMK 740 (805)
T ss_dssp HCSSCCCC-----------SE-EEEECSBSC-EEEEECCCCCTTCTTTS-CCCEEEEECTTSBHHHHHHHHHHCTTTCCS
T ss_pred hccccccC-----------ce-EEecCCCCc-ccccccCCCCCCCCeeC-ceeEEEEECCcChHHHHHHHHHhhhccCcc
Confidence 4432 222 11 012 1111 1111 334566676665 579999999889999999999885 5687
Q ss_pred EEEEEe
Q psy7300 980 ITILLL 985 (986)
Q Consensus 980 ~~~~~~ 985 (986)
..||++
T Consensus 741 ~~~~~~ 746 (805)
T 2nvu_B 741 SPAITA 746 (805)
T ss_dssp SCEEEE
T ss_pred cceEEE
Confidence 777754
No 8
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=9e-36 Score=352.30 Aligned_cols=189 Identities=20% Similarity=0.324 Sum_probs=172.7
Q ss_pred CccchhhhccCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcH
Q psy7300 443 SRYEGQVAIFGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPK 522 (986)
Q Consensus 443 ~rydrqi~~~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~K 522 (986)
.||+||+++||.++|++|++++|+||||||+||++|||||++|| |+|+|+|+|+|+.|||+|||||+.+|||++|
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGV-----g~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI-----GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 69999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCCcceEE
Q psy7300 523 SATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGTKGNSQ 602 (986)
Q Consensus 523 a~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~~G~v~ 602 (986)
|++++++++++||.++|+++...+.+..+ .+.+|++++|+||+|+||.++|.++++.|+.+++|+|++|+.|+.|++.
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~--~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~ 165 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLD--NDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMR 165 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHH--SCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhh--hhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEE
Confidence 99999999999999999999877642111 2368899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCccccCCCCCCCCCCCcccccCCCCcchhhHHH
Q psy7300 603 VVVPHLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQW 641 (986)
Q Consensus 603 ~~~p~~t~cy~c~~~~~~~~~p~Ctl~~~P~~~~h~i~w 641 (986)
+++|. ..|+.+. |.+...|.|++..+|..++||-.+
T Consensus 166 ~~~p~-~~~~d~~--~~~~~~~lr~~~p~P~~~~~~~~~ 201 (531)
T 1tt5_A 166 IIIKE-HPVIESH--PDNALEDLRLDKPFPELREHFQSY 201 (531)
T ss_dssp EECSC-EEESCCC--CSSCCCCCCSSSCCHHHHHHHHTC
T ss_pred EEcCC-ceeccCC--CCCCCCcccccCCCCCchhhhhcc
Confidence 99994 5566653 445678999999999999999554
No 9
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=5.5e-35 Score=320.10 Aligned_cols=165 Identities=25% Similarity=0.478 Sum_probs=127.9
Q ss_pred Cccchhhhc--cCH-HHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCC
Q psy7300 443 SRYEGQVAI--FGK-NFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQ 519 (986)
Q Consensus 443 ~rydrqi~~--~G~-~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG 519 (986)
--|+|||.+ ||. ++|++|+++||+||||||+||+++++|+++|| |+|+|+|+|+||.|||+||| |+.+|||
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGV-----G~i~lvD~D~Ve~sNL~Rq~-~~~~diG 87 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGI-----GKLLLFDYDKVELANMNRLF-FQPHQAG 87 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBC-------------CCTT
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCC-----CEEEEECCCccChhhccccc-CChhhcC
Confidence 479999988 998 99999999999999999999999999999999 89999999999999999997 8999999
Q ss_pred CcHHHHHHHHHHhhCCCceEEEEEcccCCccccccccccc-----------cCCCEEEEcCCCHHHHHHHHHHHHHcCCc
Q psy7300 520 QPKSATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFF-----------ESLDGIANALDNVEARIYMDRRCVYSRKP 588 (986)
Q Consensus 520 ~~Ka~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~-----------~~~DvVi~a~Dn~~ar~~l~~~c~~~~~p 588 (986)
++|+++|+++++++||+++|+++..++.+.. .+ ++|+ +++|+||+|+||+++|.++|+.|+++++|
T Consensus 88 ~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~--~~-~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~P 164 (292)
T 3h8v_A 88 LSKVQAAEHTLRNINPDVLFEVHNYNITTVE--NF-QHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT 164 (292)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECCCTTSHH--HH-HHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHHHhhCCCcEEEEecccCCcHH--HH-HHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCC
Confidence 9999999999999999999999999887421 11 2343 68999999999999999999999999999
Q ss_pred EEEEeecC--CcceEEEEeCCCCccccCCC
Q psy7300 589 LLESGTLG--TKGNSQVVVPHLTESYSSSQ 616 (986)
Q Consensus 589 li~~g~~G--~~G~v~~~~p~~t~cy~c~~ 616 (986)
+|++|+.| +.|++.++.|+.|+||+|..
T Consensus 165 li~~gv~~~~~~Gqv~~~~pg~t~Cy~Cl~ 194 (292)
T 3h8v_A 165 WMESGVSENAVSGHIQLIIPGESACFACAP 194 (292)
T ss_dssp EEEEEECTTSSEEEEEEECTTTSCCTTSSS
T ss_pred EEEeeeecceeEEEEEEECCCCCCCHhhcC
Confidence 99999986 88999999999999999953
No 10
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=2.5e-34 Score=310.92 Aligned_cols=164 Identities=27% Similarity=0.447 Sum_probs=155.5
Q ss_pred Cccchhhhc--cCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCC
Q psy7300 443 SRYEGQVAI--FGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQ 520 (986)
Q Consensus 443 ~rydrqi~~--~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~ 520 (986)
.||+||+++ ||.++|++|++++|+|||+||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.+|||+
T Consensus 7 ~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gv-----g~i~lvD~d~v~~sNL~Rq~l~~~~diG~ 81 (251)
T 1zud_1 7 MRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGV-----GTLVLADDDDVHLSNLQRQILFTTEDIDR 81 (251)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTC-----SEEEEECCCBCCGGGTTTCTTCCGGGTTS
T ss_pred HHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCC-----CeEEEEeCCCcccccCCCCccCChhhCCC
Confidence 699999999 99999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCCcce
Q psy7300 521 PKSATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGTKGN 600 (986)
Q Consensus 521 ~Ka~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~~G~ 600 (986)
+|+++++++++++||+++|+++...+..++. .++++++|+||+|+||.++|..+++.|+++++|+|++++.|+.|+
T Consensus 82 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~----~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~ 157 (251)
T 1zud_1 82 PKSQVSQQRLTQLNPDIQLTALQQRLTGEAL----KDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQ 157 (251)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHHH----HHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeccCCHHHH----HHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceE
Confidence 9999999999999999999999887764221 467889999999999999999999999999999999999999999
Q ss_pred EEEEeCCC-CccccCC
Q psy7300 601 SQVVVPHL-TESYSSS 615 (986)
Q Consensus 601 v~~~~p~~-t~cy~c~ 615 (986)
+.++.|.. ++||.|.
T Consensus 158 v~~~~p~~~~~c~~cl 173 (251)
T 1zud_1 158 LMVLTPPWEQGCYRCL 173 (251)
T ss_dssp EEEECTTCTTCCHHHH
T ss_pred EEEEccCCCCCcEEEe
Confidence 99999987 7999994
No 11
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=4.7e-34 Score=322.19 Aligned_cols=164 Identities=18% Similarity=0.355 Sum_probs=155.0
Q ss_pred CccchhhhccCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcH
Q psy7300 443 SRYEGQVAIFGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPK 522 (986)
Q Consensus 443 ~rydrqi~~~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~K 522 (986)
.||+||+++||.++|++|++++|+||||||+||+++|+|+++|| |+|+|+|+|+|+.+||+|||||+.+|||++|
T Consensus 17 ~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gv-----g~itlvD~d~V~~sNL~rq~~~~~~diG~~K 91 (346)
T 1y8q_A 17 AQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGV-----KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNR 91 (346)
T ss_dssp HHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCSSCGGGCTTSCSSCTTSBH
T ss_pred HHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEECCCcchhhCCCCCccccccCcCCH
Confidence 79999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCCcceEE
Q psy7300 523 SATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGTKGNSQ 602 (986)
Q Consensus 523 a~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~~G~v~ 602 (986)
+++++++++++||.++|+++...+.+ ..+++++++|+||+|+|+.++|.+++++|+.+++|+|.+|+.|+.|++.
T Consensus 92 a~~~~~~l~~lnp~v~v~~~~~~~~~-----~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~ 166 (346)
T 1y8q_A 92 AEASLERAQNLNPMVDVKVDTEDIEK-----KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTF 166 (346)
T ss_dssp HHHHHHHHHHTCTTSEEEEECSCGGG-----CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEE
T ss_pred HHHHHHHHHhHCCCeEEEEEecccCc-----chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEE
Confidence 99999999999999999999988753 2368899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCccccCCCC
Q psy7300 603 VVVPHLTESYSSSQD 617 (986)
Q Consensus 603 ~~~p~~t~cy~c~~~ 617 (986)
+.++ .+.|+.|..+
T Consensus 167 ~d~~-~~~~~~~~~~ 180 (346)
T 1y8q_A 167 ANLG-EHEFVEEKTK 180 (346)
T ss_dssp EECS-EEEEEEECC-
T ss_pred EecC-CCCEEEcCCC
Confidence 9886 5788888544
No 12
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.98 E-value=2.1e-32 Score=295.78 Aligned_cols=150 Identities=30% Similarity=0.428 Sum_probs=143.1
Q ss_pred hhhccccchhc--ccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHH
Q psy7300 54 DEGLYSRQLYV--LGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRA 131 (986)
Q Consensus 54 ~~~~y~Rqi~l--~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka 131 (986)
+.+||+||+++ ||.++|++|++++|+|+|+||+|++++++|+++|||+|+|+|.|.|+++||+||++++++|+|++||
T Consensus 5 e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka 84 (251)
T 1zud_1 5 DFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKS 84 (251)
T ss_dssp HHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHH
T ss_pred HHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHH
Confidence 35799999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCEEEeecCCCCH----hhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccceEEEEe
Q psy7300 132 EVSHTNLSQLNPYVSTKAYTGELSE----AFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGLFAQVFC 203 (986)
Q Consensus 132 ~a~~~~L~~lNp~V~v~~~~~~~~~----~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~ 203 (986)
++++++|+++||+++|+.+...+++ ++++++|+||+|+|+.+.+..++++|+++++|+|++++.|+.|++++
T Consensus 85 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~ 160 (251)
T 1zud_1 85 QVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMV 160 (251)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceEEEE
Confidence 9999999999999999999887754 46789999999999999999999999999999999999999999864
No 13
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.98 E-value=5.2e-33 Score=300.28 Aligned_cols=164 Identities=27% Similarity=0.438 Sum_probs=154.8
Q ss_pred Cccchhhhc--cCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCC
Q psy7300 443 SRYEGQVAI--FGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQ 520 (986)
Q Consensus 443 ~rydrqi~~--~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~ 520 (986)
.||+||+++ ||.++|++|++++|+|||+||+|++++++|+++|+ |+|+|+|.|.|+.|||+||+||+.+|||+
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv-----~~i~lvD~d~v~~sNl~Rq~l~~~~diG~ 84 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGV-----GNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCGGGGGTCTTCCGGGTTS
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCC-----CeEEEEcCCCcccccCCcccccChhhcCc
Confidence 699999999 99999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCCcce
Q psy7300 521 PKSATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGTKGN 600 (986)
Q Consensus 521 ~Ka~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~~G~ 600 (986)
+|+++++++++++||.++|+++...+.+++ . .+++.++|+||+|+|+.++|..+++.|++.++|+|++++.|+.|+
T Consensus 85 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~--~--~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~ 160 (249)
T 1jw9_B 85 PKVESARDALTRINPHIAITPVNALLDDAE--L--AALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ 160 (249)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHH--H--HHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeccCCHhH--H--HHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEE
Confidence 999999999999999999999988775322 1 467899999999999999999999999999999999999999999
Q ss_pred EEEEeCCC-CccccCC
Q psy7300 601 SQVVVPHL-TESYSSS 615 (986)
Q Consensus 601 v~~~~p~~-t~cy~c~ 615 (986)
+.++.|+. ++||.|.
T Consensus 161 v~~~~p~~~~~c~~c~ 176 (249)
T 1jw9_B 161 ITVFTYQDGEPCYRCL 176 (249)
T ss_dssp EEEECCCTTCCCTHHH
T ss_pred EEEEeCCCCCCceEEE
Confidence 99999987 6999994
No 14
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=99.98 E-value=4.8e-32 Score=312.82 Aligned_cols=271 Identities=21% Similarity=0.311 Sum_probs=195.0
Q ss_pred ccHHHHHH-hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCC
Q psy7300 65 LGHDAMRR-MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNP 143 (986)
Q Consensus 65 ~G~~~q~k-L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp 143 (986)
.|.+++++ |++++|+|+|+||+|+++|++|+++|||+|+|+|+|.|+.+||+|||+++++|||++||++++++|+++||
T Consensus 29 ~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp 108 (434)
T 1tt5_B 29 PSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP 108 (434)
T ss_dssp CCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHST
T ss_pred cCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCC
Confidence 34445654 59999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeecCCC---CHhhhccccEEEEecCCHHHHHHHHHHHHHc------------CCcEEEeecccceEEEEeecCCc
Q psy7300 144 YVSTKAYTGEL---SEAFIKKFRVVVLTNSTYDEQLAISQITHAN------------DIALIIADTRGLFAQVFCDFGNN 208 (986)
Q Consensus 144 ~V~v~~~~~~~---~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~------------~ip~I~~~~~G~~G~vf~d~g~~ 208 (986)
+|+|+.+...+ +.+++++||+||+|.|+.+.+..||+.|+.. ++|+|++++.|+.|++++..+..
T Consensus 109 ~v~v~~~~~~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~ 188 (434)
T 1tt5_B 109 NCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGM 188 (434)
T ss_dssp TCCCEEEESCGGGBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEEETTEEEEEEECTTT
T ss_pred CCEEEEEecccchhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEeccccceeEEEEECCCC
Confidence 99999988766 3578999999999999999999999999874 99999999999999998765321
Q ss_pred eEEEcCCCCCCceeEEeceecccCcccccccccccCCCCCceEEEEeeccccccCCCCCeeeEEeCceeeecCCcccccc
Q psy7300 209 FTVVDTTGENPVSVIIAGVTREAEGVVTCLDETRHGFEDGDYVTFSEVQGMTQLNGIEPRKVKVLGPYTFSIGDTTKFDE 288 (986)
Q Consensus 209 f~v~~~~~e~p~~~~i~~i~~~~~~~v~~~~~~~h~~~~gd~v~f~ev~g~~~~n~~~~~~i~~~~~~~~~i~d~~~f~~ 288 (986)
..+.. |+-.. + | .
T Consensus 189 --------t~Cy~---------------C~~~~-~-----------------------p--------------~------ 201 (434)
T 1tt5_B 189 --------TACIE---------------CTLEL-Y-----------------------P--------------P------ 201 (434)
T ss_dssp --------SCCGG---------------GGGGG-S-----------------------C--------------C------
T ss_pred --------CCCcc---------------cccCC-C-----------------------C--------------C------
Confidence 11111 10000 0 0 0
Q ss_pred ceecceeeEecCCccccCCChHhhhcCCccccccccccCCchhHHHHHHHHHH-HHHHhCCC-CCCC---CHHhHHHHHH
Q psy7300 289 YVSGGIATQVKQPKILKFLPLPEALQQPEFVMTDFAKFESPANLHVAFSTLHN-FVKSFGYA-PKPW---NSADADQFLA 363 (986)
Q Consensus 289 y~~gg~~~qvk~p~~i~f~sL~~~l~~p~~~~~d~~k~~~~~~l~~~~~al~~-F~~~~gr~-P~~~---~~~D~~~~~~ 363 (986)
+...+..++.. .|. ..-|.+..|... |...+... |... +.++++.+.+
T Consensus 202 ------------~~~~p~Ct~~~---~p~------------~~~h~i~~a~~i~~~~~~~~~~~~~~d~d~~~~~~~v~~ 254 (434)
T 1tt5_B 202 ------------QVNFPMCTIAS---MPR------------LPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQ 254 (434)
T ss_dssp ------------CCCCCHHHHHH---CCC------------SHHHHHHHHHHTHHHHSCTTCTTCCCCTTCHHHHHHHHH
T ss_pred ------------cCCCccccccc---CCc------------chhHHHHHHHHHHHhhhcccccccccCCCcHHHHHHHHH
Confidence 00000001110 110 012222222222 22222111 1111 2345555666
Q ss_pred HHHHhhhc--CCCccHHHHHHHHHhhcCCCCchhhhhhchhHHHHHHhhhCCCccccccccccchhhh
Q psy7300 364 LAKESKLN--NGELDEKLLQLFAKTAAGNCNPVNAVIGGIVAQEVMKACSGKFHPIFQWLYFDAVECI 429 (986)
Q Consensus 364 l~~~~~~~--~~~ide~lv~~~~~~~~~el~pvaA~iGGi~AQEvIKaiT~kf~Pi~q~~~fD~~e~l 429 (986)
.+++.... ...++...+..++...-..++|++|++||+.|||+||++||+..|++|+++||+....
T Consensus 255 ~a~~~~~~~gi~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g~~~~l~~~l~~d~~~~~ 322 (434)
T 1tt5_B 255 KSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGL 322 (434)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTCSCCCCSEEEEECSBSC
T ss_pred HHHHHHHHcCCCccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhCCCcccCceEEEEcCCCc
Confidence 55554332 1234556667776666677889999999999999999999999999999999987654
No 15
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=8.3e-32 Score=304.64 Aligned_cols=165 Identities=24% Similarity=0.389 Sum_probs=152.4
Q ss_pred Cccchhhh---ccC--HHH-HHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCC
Q psy7300 443 SRYEGQVA---IFG--KNF-QEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPH 516 (986)
Q Consensus 443 ~rydrqi~---~~G--~~~-q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~ 516 (986)
+||+||+. +|| .++ |++|++++|+||||||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.+
T Consensus 93 ~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGv-----g~i~lvD~D~Ve~sNL~Rq~l~~~~ 167 (353)
T 3h5n_A 93 NRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGI-----GEIILIDNDQIENTNLTRQVLFSED 167 (353)
T ss_dssp STTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEEECCBCCGGGGGTCTTCCGG
T ss_pred HHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCC-----CeEEEECCCcCcccccccccCCChH
Confidence 89999976 466 455 999999999999999999999999999999 8999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHH-HHHHHHHHHHHcCCcEEEEeec
Q psy7300 517 DVQQPKSATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVE-ARIYMDRRCVYSRKPLLESGTL 595 (986)
Q Consensus 517 diG~~Ka~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~-ar~~l~~~c~~~~~pli~~g~~ 595 (986)
|||++|+++++++++++||+++|+++..++.+.+. . .+ ++++|+||+|+||+. +|.++|+.|+++++|+|.+|+.
T Consensus 168 diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~--~-~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~ 243 (353)
T 3h5n_A 168 DVGKNKTEVIKRELLKRNSEISVSEIALNINDYTD--L-HK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYV 243 (353)
T ss_dssp GTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGG--G-GG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HCCChHHHHHHHHHHHHCCCCeEEEeecccCchhh--h-hH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 99999999999999999999999999999876542 1 34 899999999999999 9999999999999999999999
Q ss_pred CCcceEEEE-eCCCCccccCCC
Q psy7300 596 GTKGNSQVV-VPHLTESYSSSQ 616 (986)
Q Consensus 596 G~~G~v~~~-~p~~t~cy~c~~ 616 (986)
|..|.+..+ +|+.++||+|..
T Consensus 244 g~~g~~g~~~~p~~~~C~~C~~ 265 (353)
T 3h5n_A 244 NDIAVFGPLYVPGKTGCYECQK 265 (353)
T ss_dssp TTEEEEEEEECTTTSCCTTTTC
T ss_pred CCEEEEEEEEcCCCCCChhhcC
Confidence 999999776 599999999953
No 16
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=4.2e-30 Score=321.50 Aligned_cols=275 Identities=21% Similarity=0.306 Sum_probs=202.3
Q ss_pred hhcccHHHHHHh-hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh
Q psy7300 62 LYVLGHDAMRRM-ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ 140 (986)
Q Consensus 62 i~l~G~~~q~kL-~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~ 140 (986)
-+.+|.++|+++ ++++|+|||+||+|+++|++|+++|||+|+|+|+|.|+.+||+|||+++.+|||++||++++++|++
T Consensus 397 ~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~ 476 (805)
T 2nvu_B 397 DFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLND 476 (805)
T ss_dssp TCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHH
Confidence 346899999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEeecCCC---CHhhhccccEEEEecCCHHHHHHHHHHHHH------------cCCcEEEeecccceEEEEeec
Q psy7300 141 LNPYVSTKAYTGEL---SEAFIKKFRVVVLTNSTYDEQLAISQITHA------------NDIALIIADTRGLFAQVFCDF 205 (986)
Q Consensus 141 lNp~V~v~~~~~~~---~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~------------~~ip~I~~~~~G~~G~vf~d~ 205 (986)
+||+|+|+.+...+ +.+++++||+||+|.|+.+.|..||+.|+. +++|+|++++.|+.|++++.+
T Consensus 477 ~np~~~v~~~~~~~~~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g~~G~~~~~~ 556 (805)
T 2nvu_B 477 RVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVIL 556 (805)
T ss_dssp HSTTCEEEEEESCGGGSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEEEEEEEC
T ss_pred HCCCCEEEEEeccccccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEeccccCceeEEEEC
Confidence 99999999988776 357889999999999999999999999987 499999999999999998876
Q ss_pred CCceEEEcCCCCCCceeEEeceecccCcccccccccccCCCCCceEEEEeeccccccCCCCCeeeEEeCceeeecCCccc
Q psy7300 206 GNNFTVVDTTGENPVSVIIAGVTREAEGVVTCLDETRHGFEDGDYVTFSEVQGMTQLNGIEPRKVKVLGPYTFSIGDTTK 285 (986)
Q Consensus 206 g~~f~v~~~~~e~p~~~~i~~i~~~~~~~v~~~~~~~h~~~~gd~v~f~ev~g~~~~n~~~~~~i~~~~~~~~~i~d~~~ 285 (986)
... ..+. .|.-.. | | ..
T Consensus 557 p~~--------~~c~---------------~c~~~~-~-----------------------p--------------~~-- 573 (805)
T 2nvu_B 557 PGM--------TACI---------------ECTLEL-Y-----------------------P--------------PQ-- 573 (805)
T ss_dssp TTT--------SCCT---------------TTSGGG-S-----------------------C--------------CC--
T ss_pred CCC--------CCce---------------eccCCC-C-----------------------C--------------CC--
Confidence 421 0111 010000 0 0 00
Q ss_pred cccceecceeeEecCCccccCCChHhhhcCCccccccccccCCchhHHHHHHHHHHHHHHhCCC-CCC---CCHHhHHHH
Q psy7300 286 FDEYVSGGIATQVKQPKILKFLPLPEALQQPEFVMTDFAKFESPANLHVAFSTLHNFVKSFGYA-PKP---WNSADADQF 361 (986)
Q Consensus 286 f~~y~~gg~~~qvk~p~~i~f~sL~~~l~~p~~~~~d~~k~~~~~~l~~~~~al~~F~~~~gr~-P~~---~~~~D~~~~ 361 (986)
...+..++.. .|. ...+.+..+...+ |..++... |.. .+.++++.+
T Consensus 574 ----------------~~~~~c~~~~---~~~---------~~~~~i~~a~~~~--~~~~~~~~~~~~~d~~~~~~~~~~ 623 (805)
T 2nvu_B 574 ----------------VNFPMCTIAS---MPR---------LPEHCIEYVRMLQ--WPKEQPFGEGVPLDGDDPEHIQWI 623 (805)
T ss_dssp ----------------CCCCHHHHHH---CCC---------SHHHHHHHHHHTH--HHHHCTTSTTCCCCTTCHHHHHHH
T ss_pred ----------------CCCCccccCC---CCC---------CccHHHHHHHHhh--cccccCCCCcccCCCCCHHHHHHH
Confidence 0000001111 010 0001112222222 22222111 111 134555666
Q ss_pred HHHHHHhhhc--CCCccHHHHHHHHHhhcCCCCchhhhhhchhHHHHHHhhhCCCccccccccccchhhh
Q psy7300 362 LALAKESKLN--NGELDEKLLQLFAKTAAGNCNPVNAVIGGIVAQEVMKACSGKFHPIFQWLYFDAVECI 429 (986)
Q Consensus 362 ~~l~~~~~~~--~~~ide~lv~~~~~~~~~el~pvaA~iGGi~AQEvIKaiT~kf~Pi~q~~~fD~~e~l 429 (986)
.+.+++.... ...++...+..++...-..++|++|++||+.|||+||++||+..|++|+++||+....
T Consensus 624 ~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~~~~~~~~~~~ 693 (805)
T 2nvu_B 624 FQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGL 693 (805)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCSEEEEECSBSC
T ss_pred HHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCceEEecCCCCc
Confidence 6665554332 1234566777777777788999999999999999999999999999999999987664
No 17
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.97 E-value=6.4e-31 Score=292.15 Aligned_cols=160 Identities=21% Similarity=0.207 Sum_probs=143.8
Q ss_pred hhccCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHH
Q psy7300 449 VAIFGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAK 528 (986)
Q Consensus 449 i~~~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~ 528 (986)
.|+|+..++++|+++||+||||||+||+++++|+++|| |+|+|+|.|+|+.|||+||+||+.+|+|++|+++|++
T Consensus 21 wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGV-----g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~ 95 (340)
T 3rui_A 21 WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAA 95 (340)
T ss_dssp HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHH
T ss_pred HhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCC-----CEEEEecCCEeccccccccccCChhhcChHHHHHHHH
Confidence 37788888999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHhhCCCceEEEEEcccCCc------------cccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecC
Q psy7300 529 AIKVMNPNVNITYHENRVGPE------------TEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLG 596 (986)
Q Consensus 529 ~l~~~np~~~i~~~~~~v~~~------------~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G 596 (986)
+++++||+++|+++...+... +.. -..++++++|+|++|+||+++|.+++++|+.+++|+|+++ .|
T Consensus 96 ~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~-~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G 173 (340)
T 3rui_A 96 SLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFD-RLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LG 173 (340)
T ss_dssp HHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHH-HHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-EC
T ss_pred HHHHhCCCCEEEEEeccccccCcccchhhhhcCCHH-HHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ec
Confidence 999999999999998655200 000 0146889999999999999999999999999999999986 99
Q ss_pred CcceEEEEe-------CCCCccccCC
Q psy7300 597 TKGNSQVVV-------PHLTESYSSS 615 (986)
Q Consensus 597 ~~G~v~~~~-------p~~t~cy~c~ 615 (986)
+.|++.++. |..++||.|.
T Consensus 174 ~~G~l~v~~g~~~~~~~~~~~Cy~C~ 199 (340)
T 3rui_A 174 FDSYLVMRHGNRDEQSSKQLGCYFCH 199 (340)
T ss_dssp SSEEEEEECCCCCSSCCCCBCCGGGG
T ss_pred ceEEEEEeecccccCCCCCCCeeeeC
Confidence 999998763 5679999995
No 18
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-31 Score=330.02 Aligned_cols=183 Identities=19% Similarity=0.282 Sum_probs=163.7
Q ss_pred CccchhhhccCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcH
Q psy7300 443 SRYEGQVAIFGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPK 522 (986)
Q Consensus 443 ~rydrqi~~~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~K 522 (986)
.||+||+++||.++|++|++++|+||||||+||++|+||+++|| |+|+|+|.|+|+.+||+|||||+.+|||++|
T Consensus 8 ~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGV-----g~itlvD~D~V~~sNL~RQ~l~~~~dvG~~K 82 (1015)
T 3cmm_A 8 SLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGV-----KSMTVFDPEPVQLADLSTQFFLTEKDIGQKR 82 (1015)
T ss_dssp HHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCC-----SEEEEECCSBCCGGGGGTCTTCCGGGTTSBH
T ss_pred HhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCC-----CeEEEecCCEechhhhccccccChhhcChHH
Confidence 69999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCC-CHHHHHHHHHHHHHcCCcEEEEeecCCcceE
Q psy7300 523 SATAAKAIKVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALD-NVEARIYMDRRCVYSRKPLLESGTLGTKGNS 601 (986)
Q Consensus 523 a~~a~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-n~~ar~~l~~~c~~~~~pli~~g~~G~~G~v 601 (986)
|++++++++++||.++|+++...+. ++++.++|+||+|.| +.++|..++++|+.+++|+|.+++.|+.|++
T Consensus 83 a~a~~~~L~~lNP~v~v~~~~~~l~--------~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v 154 (1015)
T 3cmm_A 83 GDVTRAKLAELNAYVPVNVLDSLDD--------VTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNT 154 (1015)
T ss_dssp HHHHHHHHTTSCTTSCEEECCCCCC--------STTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEecCCCC--------HHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEE
Confidence 9999999999999999999887763 357899999999999 9999999999999999999999999999998
Q ss_pred EEEeCCCCccccCCC--CCCCCCCCcccccCCCCcchhhHHHHH
Q psy7300 602 QVVVPHLTESYSSSQ--DPPEKSIPICTLKNFPNAIEHTLQWAR 643 (986)
Q Consensus 602 ~~~~p~~t~cy~c~~--~~~~~~~p~Ctl~~~P~~~~h~i~wa~ 643 (986)
.+. ..+||.|.. .+++.+..+|++ .-|. +.||+.+-+
T Consensus 155 ~~d---~~~~~~c~~~~~~~p~~~~i~~i-~~p~-~v~~l~~~~ 193 (1015)
T 3cmm_A 155 FVD---LGDEFTVLDPTGEEPRTGMVSDI-EPDG-TVTMLDDNR 193 (1015)
T ss_dssp EEE---CCSCEEESBSSCCCCCEEEEEEE-CTTC-EEEESTTCC
T ss_pred Eec---CCCceEEeeCCCCCCccccccCC-CCCc-eeEeeeccc
Confidence 653 357888842 123345566777 4554 788887655
No 19
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.96 E-value=7.3e-30 Score=300.42 Aligned_cols=166 Identities=20% Similarity=0.214 Sum_probs=146.8
Q ss_pred Cccchhhhc-------cCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCC
Q psy7300 443 SRYEGQVAI-------FGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRP 515 (986)
Q Consensus 443 ~rydrqi~~-------~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~ 515 (986)
.||+||+++ +|..+|++|+++||+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+||+||+.
T Consensus 301 a~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~ 375 (598)
T 3vh1_A 301 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNF 375 (598)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTC-----CEEEEECCSBCCTTSTTTSTTCCS
T ss_pred HHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEECCCcccccccccccccch
Confidence 589988876 67778999999999999999999999999999999 899999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHhhCCCceEEEEEcccC-------Cc-----cccccccccccCCCEEEEcCCCHHHHHHHHHHHH
Q psy7300 516 HDVQQPKSATAAKAIKVMNPNVNITYHENRVG-------PE-----TEKVYDDLFFESLDGIANALDNVEARIYMDRRCV 583 (986)
Q Consensus 516 ~diG~~Ka~~a~~~l~~~np~~~i~~~~~~v~-------~~-----~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~ 583 (986)
+|||++||++|+++++++||+++|+++..++. .. +.+. ..++++++|+||+|+||+++|..++++|+
T Consensus 376 ~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~-l~~li~~~DvVvdatDn~~tR~lin~~c~ 454 (598)
T 3vh1_A 376 EDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDR-LRALIKEHDIIFLLVDSRESRWLPSLLSN 454 (598)
T ss_dssp TTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHH-HHHHHHHCSEEEECCSBGGGTHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHH-HHHHHhcCCEEEECCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999987751 10 0000 14688999999999999999999999999
Q ss_pred HcCCcEEEEeecCCcceEEEEe---C----CCCccccCC
Q psy7300 584 YSRKPLLESGTLGTKGNSQVVV---P----HLTESYSSS 615 (986)
Q Consensus 584 ~~~~pli~~g~~G~~G~v~~~~---p----~~t~cy~c~ 615 (986)
.+++|+|++ +.|+.|++.++. | ..++||.|.
T Consensus 455 ~~~~plI~a-a~G~~Gqv~v~~g~~p~~~~~~~~Cy~Cl 492 (598)
T 3vh1_A 455 IENKTVINA-ALGFDSYLVMRHGNRDEQSSKQLGCYFCH 492 (598)
T ss_dssp HTTCEEEEE-EECSSEEEEEEEC--------CBCCTTTS
T ss_pred hcCCCEEEE-EECCccEEEEEccCCCccCCCCCCceeec
Confidence 999999986 689999998763 3 357899995
No 20
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.96 E-value=2.2e-29 Score=296.15 Aligned_cols=160 Identities=21% Similarity=0.234 Sum_probs=142.8
Q ss_pred hccCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHH
Q psy7300 450 AIFGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKA 529 (986)
Q Consensus 450 ~~~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~ 529 (986)
|+++..++++|+++||+||||||+||++|++|+++|| |+|+|+|.|+|+.|||+||+||+.+|||++|+++|+++
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~ 388 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 388 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHH
Confidence 6788989999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHhhCCCceEEEEEcccC-------Ccccccc----ccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCCc
Q psy7300 530 IKVMNPNVNITYHENRVG-------PETEKVY----DDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGTK 598 (986)
Q Consensus 530 l~~~np~~~i~~~~~~v~-------~~~~~~~----~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~~ 598 (986)
++++||+++|+++...+. ++....+ ..++++++|+||+|+||.++|.+++++|+.+++|+|+++ .|+.
T Consensus 389 L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~ 467 (615)
T 4gsl_A 389 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFD 467 (615)
T ss_dssp HHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSS
T ss_pred HHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccce
Confidence 999999999999986551 1000000 146789999999999999999999999999999999986 8999
Q ss_pred ceEEEEe-------CCCCccccCC
Q psy7300 599 GNSQVVV-------PHLTESYSSS 615 (986)
Q Consensus 599 G~v~~~~-------p~~t~cy~c~ 615 (986)
|++.++. |+.++||.|.
T Consensus 468 Gql~v~~g~~~~~~~~~~~CY~Cl 491 (615)
T 4gsl_A 468 SYLVMRHGNRDEQSSKQLGCYFCH 491 (615)
T ss_dssp EEEEEECCC------CCCCCTTTS
T ss_pred eEEEEeecccccCCCCCCCceeeC
Confidence 9997753 4678999995
No 21
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=99.96 E-value=5.2e-29 Score=272.80 Aligned_cols=148 Identities=15% Similarity=0.299 Sum_probs=113.8
Q ss_pred ccccchhc--ccH-HHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHH
Q psy7300 57 LYSRQLYV--LGH-DAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEV 133 (986)
Q Consensus 57 ~y~Rqi~l--~G~-~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a 133 (986)
-|+|||.| ||. ++|+||++++|+|||+||+|+++|++|+++|||+|+|+|+|.|+.+||+|||| +++|+|++||++
T Consensus 15 ~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~-~~~diG~~Ka~a 93 (292)
T 3h8v_A 15 VPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFF-QPHQAGLSKVQA 93 (292)
T ss_dssp -----------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHHH
T ss_pred CchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccC-ChhhcCchHHHH
Confidence 59999988 998 99999999999999999999999999999999999999999999999999975 789999999999
Q ss_pred HHHHHhhcCCCCEEEeecCCCCH-----hhh-----------ccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeeccc-
Q psy7300 134 SHTNLSQLNPYVSTKAYTGELSE-----AFI-----------KKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRG- 196 (986)
Q Consensus 134 ~~~~L~~lNp~V~v~~~~~~~~~-----~~l-----------~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G- 196 (986)
++++|+++||+|+|+.+...+++ +++ +++|+||+|+|+++++..||++|+++++|||++++.|
T Consensus 94 a~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv~~~ 173 (292)
T 3h8v_A 94 AEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSEN 173 (292)
T ss_dssp HHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEECTT
T ss_pred HHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeeeecc
Confidence 99999999999999999888753 243 6899999999999999999999999999999999875
Q ss_pred -ceEEEEeec
Q psy7300 197 -LFAQVFCDF 205 (986)
Q Consensus 197 -~~G~vf~d~ 205 (986)
+.|++.+-.
T Consensus 174 ~~~Gqv~~~~ 183 (292)
T 3h8v_A 174 AVSGHIQLII 183 (292)
T ss_dssp SSEEEEEEEC
T ss_pred eeEEEEEEEC
Confidence 889886543
No 22
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.95 E-value=3.5e-28 Score=262.50 Aligned_cols=149 Identities=26% Similarity=0.375 Sum_probs=142.3
Q ss_pred hhccccchhc--ccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHH
Q psy7300 55 EGLYSRQLYV--LGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAE 132 (986)
Q Consensus 55 ~~~y~Rqi~l--~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~ 132 (986)
.+||+||+++ ||.++|++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+++||+||++++++|+|++||+
T Consensus 9 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~ 88 (249)
T 1jw9_B 9 MLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVE 88 (249)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHH
T ss_pred HHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHH
Confidence 3799999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCEEEeecCCCCH----hhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccceEEEEe
Q psy7300 133 VSHTNLSQLNPYVSTKAYTGELSE----AFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGLFAQVFC 203 (986)
Q Consensus 133 a~~~~L~~lNp~V~v~~~~~~~~~----~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~ 203 (986)
+++++|+++||.++++.+...+++ ++++++|+||+|+++.+.+..++++|++.++|+|++++.|+.|++++
T Consensus 89 ~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~v~~ 163 (249)
T 1jw9_B 89 SARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITV 163 (249)
T ss_dssp HHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEEEEE
T ss_pred HHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEEEEE
Confidence 999999999999999998877753 46789999999999999999999999999999999999999999864
No 23
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.95 E-value=1.1e-27 Score=285.36 Aligned_cols=152 Identities=26% Similarity=0.424 Sum_probs=141.1
Q ss_pred chhcccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh
Q psy7300 61 QLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ 140 (986)
Q Consensus 61 qi~l~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~ 140 (986)
|+++||.++|++|++++|+|||+||+|+++|+||+++|||+|+|+|.|.|+.+||+|||+++.+|||++||++++++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEeecCCCC-----HhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccceEEEEeecC---CceEEE
Q psy7300 141 LNPYVSTKAYTGELS-----EAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGLFAQVFCDFG---NNFTVV 212 (986)
Q Consensus 141 lNp~V~v~~~~~~~~-----~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~d~g---~~f~v~ 212 (986)
+||+|+|+++...++ .+++++||+||+|.|+.+.+..++++|+.+++|+|++++.|+.|++++... .||.|.
T Consensus 83 iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~~t~Cy~C~ 162 (640)
T 1y8q_B 83 FYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECH 162 (640)
T ss_dssp TCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTTTSCCTTSS
T ss_pred HCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCCCCCCcccC
Confidence 999999999987763 468899999999999999999999999999999999999999999998764 355554
No 24
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.95 E-value=1.2e-27 Score=270.51 Aligned_cols=150 Identities=21% Similarity=0.261 Sum_probs=138.4
Q ss_pred hhhhccccchh---cccH--HH-HHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCcc
Q psy7300 53 IDEGLYSRQLY---VLGH--DA-MRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDV 126 (986)
Q Consensus 53 i~~~~y~Rqi~---l~G~--~~-q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~di 126 (986)
.+.+||+||+. +||. ++ |++|++++|+|+|+||+|+++|++|+++|||+|+|+|+|.|+.+||+||++++++|+
T Consensus 90 ~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~di 169 (353)
T 3h5n_A 90 TENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDV 169 (353)
T ss_dssp CTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGT
T ss_pred HHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHC
Confidence 45689999976 5774 55 999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHhhcCCCCEEEeecCCCCHhh----hccccEEEEecCCHH-HHHHHHHHHHHcCCcEEEeecccceEEE
Q psy7300 127 GRNRAEVSHTNLSQLNPYVSTKAYTGELSEAF----IKKFRVVVLTNSTYD-EQLAISQITHANDIALIIADTRGLFAQV 201 (986)
Q Consensus 127 Gk~Ka~a~~~~L~~lNp~V~v~~~~~~~~~~~----l~~~dvVI~~~~~~~-~~~~i~~~c~~~~ip~I~~~~~G~~G~v 201 (986)
|++||++++++|+++||+|+|+.+...++++. ++++|+||+|+|+.. ++..+|++|+++++|+|++++.|..|++
T Consensus 170 G~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g~~g~~ 249 (353)
T 3h5n_A 170 GKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVF 249 (353)
T ss_dssp TSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEETTEEEE
T ss_pred CChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeCCEEEE
Confidence 99999999999999999999999987774332 789999999999998 9999999999999999999999888876
Q ss_pred E
Q psy7300 202 F 202 (986)
Q Consensus 202 f 202 (986)
-
T Consensus 250 g 250 (353)
T 3h5n_A 250 G 250 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 25
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.93 E-value=1.6e-26 Score=256.84 Aligned_cols=155 Identities=21% Similarity=0.324 Sum_probs=141.9
Q ss_pred chhhhhhccccchhcccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCch
Q psy7300 50 DQDIDEGLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRN 129 (986)
Q Consensus 50 ~~~i~~~~y~Rqi~l~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~ 129 (986)
++.+|-++--...|+|+..++++|++++|+|+|+||+|+++|++|+++|||+|+|+|+|.|+.+||+|||+++.+|+|++
T Consensus 9 ~~~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~ 88 (340)
T 3rui_A 9 DQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKP 88 (340)
T ss_dssp HHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSB
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChH
Confidence 34556666667779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCEEEeecCCC---------------C----HhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEE
Q psy7300 130 RAEVSHTNLSQLNPYVSTKAYTGEL---------------S----EAFIKKFRVVVLTNSTYDEQLAISQITHANDIALI 190 (986)
Q Consensus 130 Ka~a~~~~L~~lNp~V~v~~~~~~~---------------~----~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I 190 (986)
||++++++|+++||+|+++.+...+ + .++++++|+||+|+|+.+++..+|++|+++++|+|
T Consensus 89 Ka~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI 168 (340)
T 3rui_A 89 KAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVI 168 (340)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEE
Confidence 9999999999999999999987543 1 35788999999999999999999999999999999
Q ss_pred EeecccceEEEEeec
Q psy7300 191 IADTRGLFAQVFCDF 205 (986)
Q Consensus 191 ~~~~~G~~G~vf~d~ 205 (986)
.++ .|+.|++.+-.
T Consensus 169 ~aa-~G~~G~l~v~~ 182 (340)
T 3rui_A 169 NAA-LGFDSYLVMRH 182 (340)
T ss_dssp EEE-ECSSEEEEEEC
T ss_pred Eee-ecceEEEEEee
Confidence 986 99999998754
No 26
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.92 E-value=5.6e-26 Score=267.38 Aligned_cols=179 Identities=18% Similarity=0.260 Sum_probs=152.7
Q ss_pred CccccccccccccCCCCCCCCC---Cch-----hhhhhccccchhcccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhC
Q psy7300 27 TTCETFNMESVANHQNGSSATA---MDQ-----DIDEGLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILSG 98 (986)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~---~~~-----~i~~~~y~Rqi~l~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~G 98 (986)
.++-+|+.....++.+.+.... ++. ..+-++.-...|+|+..++++|++++|+|||+||+|+++|++|+++|
T Consensus 270 ~~~~GWE~n~~gkl~~~~~~l~~~~dp~~la~~~~~Lnlklm~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aG 349 (615)
T 4gsl_A 270 MKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWG 349 (615)
T ss_dssp CEEEEECCCTTSCSCCEEEECHHHHCHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCcceeEEeccccCCHHHHHhhhhhhhhHHHHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcC
Confidence 4567888888888777543221 222 22223333344889999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC---------------C----Hhhh
Q psy7300 99 VKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL---------------S----EAFI 159 (986)
Q Consensus 99 Vg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~---------------~----~~~l 159 (986)
||+|+|+|+|.|+.+||+||++++.+|+|++||++++++|+++||.|+|+++...+ + .+++
T Consensus 350 VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll 429 (615)
T 4gsl_A 350 VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALI 429 (615)
T ss_dssp CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999987543 1 3467
Q ss_pred ccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccceEEEEeecC
Q psy7300 160 KKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGLFAQVFCDFG 206 (986)
Q Consensus 160 ~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~d~g 206 (986)
+++|+||+|+|+.+++..++++|+++++|+|.++ .|+.|++.+..|
T Consensus 430 ~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~Gql~v~~g 475 (615)
T 4gsl_A 430 KEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVMRHG 475 (615)
T ss_dssp HHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSSEEEEEECC
T ss_pred hcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccceeEEEEeec
Confidence 8999999999999999999999999999999976 999999987544
No 27
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.92 E-value=1.1e-25 Score=265.11 Aligned_cols=177 Identities=18% Similarity=0.250 Sum_probs=149.9
Q ss_pred CccccccccccccCCCCCCCCC-Cchhhhhhccccchhc-------ccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhC
Q psy7300 27 TTCETFNMESVANHQNGSSATA-MDQDIDEGLYSRQLYV-------LGHDAMRRMASSDVLISGLGGLGVEIAKNVILSG 98 (986)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~y~Rqi~l-------~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~G 98 (986)
+++.+|+........+...... .-....-++|+||+++ ||..+|++|++++|+|+|+||+|+++|++|+++|
T Consensus 271 ~~~~gwe~~~~Gkl~g~~tD~~g~l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aG 350 (598)
T 3vh1_A 271 MKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWG 350 (598)
T ss_dssp CEEEEECCCTTSSSSCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTT
T ss_pred CcCcCccCCCCCCCcceeecchhccCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcC
Confidence 5566787776665554322111 1112233679999886 6677899999999999999999999999999999
Q ss_pred CCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC---------------C----Hhhh
Q psy7300 99 VKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL---------------S----EAFI 159 (986)
Q Consensus 99 Vg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~---------------~----~~~l 159 (986)
||+|+|+|+|.|+.+||+||++++.+|||++||++++++|+++||.|+|+++...+ + ++++
T Consensus 351 VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li 430 (598)
T 3vh1_A 351 VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALI 430 (598)
T ss_dssp CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987653 1 3467
Q ss_pred ccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccceEEEEee
Q psy7300 160 KKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGLFAQVFCD 204 (986)
Q Consensus 160 ~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~~G~vf~d 204 (986)
+++|+||+|+|+.++|..++++|+++++|+|.+ +.|+.|++.+-
T Consensus 431 ~~~DvVvdatDn~~tR~lin~~c~~~~~plI~a-a~G~~Gqv~v~ 474 (598)
T 3vh1_A 431 KEHDIIFLLVDSRESRWLPSLLSNIENKTVINA-ALGFDSYLVMR 474 (598)
T ss_dssp HHCSEEEECCSBGGGTHHHHHHHHHTTCEEEEE-EECSSEEEEEE
T ss_pred hcCCEEEECCCCHHHHHHHHHHHHhcCCCEEEE-EECCccEEEEE
Confidence 899999999999999999999999999999986 68999988653
No 28
>2v31_A Ubiquitin-activating enzyme E1 X; ligase, phosphorylation, catalytic domain, heteronuclear first catalytic cysteine half-domain, E1 protein; NMR {Mus musculus}
Probab=99.89 E-value=3e-24 Score=199.89 Aligned_cols=111 Identities=57% Similarity=1.040 Sum_probs=108.7
Q ss_pred ecCCceEEEcCCCCCCceeEEeceecccCcccccccccccCCCCCceEEEEeeccccccCCCCCeeeEEeCceeeecCCc
Q psy7300 204 DFGNNFTVVDTTGENPVSVIIAGVTREAEGVVTCLDETRHGFEDGDYVTFSEVQGMTQLNGIEPRKVKVLGPYTFSIGDT 283 (986)
Q Consensus 204 d~g~~f~v~~~~~e~p~~~~i~~i~~~~~~~v~~~~~~~h~~~~gd~v~f~ev~g~~~~n~~~~~~i~~~~~~~~~i~d~ 283 (986)
|||++|.|.|++||+|.+++|.+|+++.+|.|+++++.+|++++||+|+|++|+||.++|+++|++|++++|++|+|+|+
T Consensus 1 DFG~~F~V~D~dGE~p~~~~I~~Is~~~~g~Vt~~~~~~H~l~dGD~V~FseV~GM~eLN~~~p~~i~v~~p~tf~I~dt 80 (112)
T 2v31_A 1 EFGEEMVLTDSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQLNGCQPMEIKVLGPYTFSICDT 80 (112)
T ss_dssp CCSCCCCCCCCCCSSCCEEEEEEECCSSSEEEEECTTCCCCCCTTCEEEECSEESCCTTGGGCCEEEEECSSSEEEESCC
T ss_pred CCCCCcEEECCCCCccceeeeeeeecCCCcEEEEecCCccCCcCCCEEEEEeeEcchhhCCCcceEEEEcCCCEEEEecc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceecceeeEecCCccccCCChHhhhc
Q psy7300 284 TKFDEYVSGGIATQVKQPKILKFLPLPEALQ 314 (986)
Q Consensus 284 ~~f~~y~~gg~~~qvk~p~~i~f~sL~~~l~ 314 (986)
+.|.+|++||+++|||+|++++|++|+++|.
T Consensus 81 s~f~~Y~~GG~~tqVK~p~~~~FksL~~~l~ 111 (112)
T 2v31_A 81 SNFSDYIRGGIVSQVKVPKKISFKSLPASLV 111 (112)
T ss_dssp TTSCCCCEECEEECCCCCCSCCCCCCSCCSC
T ss_pred cccccccCCeEEEEEeCCeEEcccCHHHHhh
Confidence 9999999999999999999999999998875
No 29
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=98.40 E-value=1.9e-06 Score=93.18 Aligned_cols=66 Identities=20% Similarity=0.355 Sum_probs=49.5
Q ss_pred HHHHHHHHHhcCCcccccCCCCCCcCCCCCCCCccccCCCCCc--chhhHhhhHHHHHHHhCCCCCCcHHHHHHHHhc
Q psy7300 712 YNNQIRQLLFNFPPEQVTSSGQPFWSGPKRCPKPLEFDVTDPL--HLQYIYTGANLKAELYGIPQVRNLDAIAQMVKQ 787 (986)
Q Consensus 712 F~~~I~~ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~--h~~fi~~~a~l~a~~~~i~~~~d~~~~~~~~~~ 787 (986)
|.+.+++|+..+|..... . .....|++||.+|.. |++||.+||||||.+|||+. .|+-.++.|+.+
T Consensus 207 ~~~~~~~L~~~l~~~~~~-------~--~~~~~pl~FeKDDd~N~hmdFItAaSNLRA~nY~I~~-~dr~~~K~IAG~ 274 (276)
T 1z7l_A 207 DDSRLEELKATLPSPDKL-------P--GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISP-ADRHKSKLIAGK 274 (276)
T ss_dssp CSHHHHHHHHHSCCGGGS-------T--TCCCCCCCCCSSCTTSSHHHHHHHHHHHHHHHTTCCC-CCHHHHHHHTTC
T ss_pred cHHHHHHHHHHhhhhhhc-------c--cccCCCcceecCCCcccHHHHHHHHHHHHHHHcCCCc-CCHHHHHHHhCC
Confidence 556788888877643221 1 124579999999998 99999999999999999985 666666666543
No 30
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.39 E-value=0.00037 Score=73.18 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=72.1
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
.|++.+|||||.|.+|...++.|..+|. .+++++++.. +. + +.|.+- . .++...
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~------------------~~---l-~~l~~~-~--~i~~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVS------------------AE---I-NEWEAK-G--QLRVKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCC------------------HH---H-HHHHHT-T--SCEEEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCC------------------HH---H-HHHHHc-C--CcEEEE
Confidence 5789999999999999999999999997 7999997421 01 1 122221 2 344556
Q ss_pred CCCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 152 GELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
..+.++.+.++|+||.++++.+....+...|+ .+||+-.++.-.
T Consensus 82 ~~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~ 125 (223)
T 3dfz_A 82 KKVGEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVNMASSFS 125 (223)
T ss_dssp SCCCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEEC-----
T ss_pred CCCCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEEEeCCcc
Confidence 66777788999999999998888888999998 899876666443
No 31
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.14 E-value=0.0007 Score=73.80 Aligned_cols=80 Identities=19% Similarity=0.207 Sum_probs=63.7
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
.+++++|+|+|+||+|..++..|...|+++|+|++.+ ..|++.+++.+....|.+.+....
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~ 184 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcC
Confidence 3578899999999999999999999999999999864 248888889998888777776654
Q ss_pred CCCCHhhhccccEEEEecC
Q psy7300 152 GELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~ 170 (986)
.+--.+.+.++|+||.|+.
T Consensus 185 ~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 185 ARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp STTHHHHHHHSSEEEECSS
T ss_pred HHHHHHHHhcCCEEEECCC
Confidence 2112345678899888873
No 32
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.11 E-value=0.00067 Score=71.19 Aligned_cols=91 Identities=14% Similarity=0.133 Sum_probs=67.3
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
.|.+++|+|||+|.+|...++.|...|. +++|++++.-+ .+.+.+. ...+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA------~VtVvap~~~~---------------------~l~~l~~--~~~i~ 78 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA------AITVVAPTVSA---------------------EINEWEA--KGQLR 78 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC------CEEEECSSCCH---------------------HHHHHHH--TTSCE
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEECCCCCH---------------------HHHHHHH--cCCcE
Confidence 4788999999999999999999999997 99999875210 1122222 12333
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcE
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPL 589 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pl 589 (986)
.+.. .|.++.+.++|+||.|+|+.+.-..+...|. .++|+
T Consensus 79 --~i~~--------~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~V 118 (223)
T 3dfz_A 79 --VKRK--------KVGEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLV 118 (223)
T ss_dssp --EECS--------CCCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEE
T ss_pred --EEEC--------CCCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEE
Confidence 2322 2345567899999999999998889999997 88874
No 33
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.98 E-value=0.0015 Score=60.20 Aligned_cols=96 Identities=17% Similarity=0.148 Sum_probs=64.2
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
.++|+|+|+|++|..+++.|...|. -+++++|.+. .|.+.+ . .+.+. .
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~-----~~v~~~~r~~-------------------~~~~~~----~--~~~~~--~ 52 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSN-----YSVTVADHDL-------------------AALAVL----N--RMGVA--T 52 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSS-----EEEEEEESCH-------------------HHHHHH----H--TTTCE--E
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCCH-------------------HHHHHH----H--hCCCc--E
Confidence 4689999999999999999999994 3899988542 122211 1 23333 3
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEe
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESG 593 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g 593 (986)
+..++.... .. .+.+.++|+||+|+... ....+...|...++++++..
T Consensus 53 ~~~d~~~~~-~~--~~~~~~~d~vi~~~~~~-~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 53 KQVDAKDEA-GL--AKALGGFDAVISAAPFF-LTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp EECCTTCHH-HH--HHHTTTCSEEEECSCGG-GHHHHHHHHHHTTCEEECCC
T ss_pred EEecCCCHH-HH--HHHHcCCCEEEECCCch-hhHHHHHHHHHhCCCEEEec
Confidence 333443211 11 34578999999998543 34567778899999988754
No 34
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.96 E-value=0.00082 Score=73.27 Aligned_cols=79 Identities=20% Similarity=0.270 Sum_probs=62.3
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
.+.+++|+|+|+||+|..++..|+..|+ ++|+|++.+. .|++.+++.+...+|.++
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~-----~~v~i~~R~~-------------------~~a~~la~~~~~~~~~~~ 179 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGV-----QKLQVADLDT-------------------SRAQALADVINNAVGREA 179 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSSH-------------------HHHHHHHHHHHHHHTSCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEECCH-------------------HHHHHHHHHHHhhcCCce
Confidence 3678999999999999999999999999 6899986542 588888888888888777
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcC
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANAL 569 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~ 569 (986)
+.++.. . +. .+.+.++|+||||+
T Consensus 180 i~~~~~--~----~l--~~~l~~~DiVInaT 202 (283)
T 3jyo_A 180 VVGVDA--R----GI--EDVIAAADGVVNAT 202 (283)
T ss_dssp EEEECS--T----TH--HHHHHHSSEEEECS
T ss_pred EEEcCH--H----HH--HHHHhcCCEEEECC
Confidence 766541 1 01 23457899999996
No 35
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.88 E-value=0.0039 Score=67.39 Aligned_cols=119 Identities=13% Similarity=0.263 Sum_probs=76.0
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCc--ccccCcCccCchHHHHHHHHHhh-cCC-----
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSS--QFYLSEKDVGRNRAEVSHTNLSQ-LNP----- 143 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~r--qf~~~~~diGk~Ka~a~~~~L~~-lNp----- 143 (986)
.|++.+|||||+|.+|...++.|..+|. +++++|++.... +.. +-+.... +. ++. ....+. +|+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~--l~~~~~~l~~~~--~~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKS--IIPKFGKFIQNK--DQ-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTT--HHHHHCGGGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcc--hhHHHHHHHhcc--cc-ccc--cchhhcccccccccc
Confidence 4678999999999999999999999996 699999755311 100 0000000 00 000 000011 111
Q ss_pred CCEE-EeecCCCCHhhhc------cccEEEEecCCHHHHHHHHHHHHHc---CCcEEEeecccce
Q psy7300 144 YVST-KAYTGELSEAFIK------KFRVVVLTNSTYDEQLAISQITHAN---DIALIIADTRGLF 198 (986)
Q Consensus 144 ~V~v-~~~~~~~~~~~l~------~~dvVI~~~~~~~~~~~i~~~c~~~---~ip~I~~~~~G~~ 198 (986)
.-.+ ..+...+.++.+. ++|+||.++++.+....+...|++. ++|+-.++--.+.
T Consensus 82 ~g~i~~~i~~~~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd~pel~ 146 (274)
T 1kyq_A 82 KNEIYEYIRSDFKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVADKPDLC 146 (274)
T ss_dssp SCCCSEEECSSCCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETTCGGGB
T ss_pred cCCeeEEEcCCCCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECCCcccC
Confidence 1134 5555666666676 8999999999988888999999998 8887666644443
No 36
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.81 E-value=0.0065 Score=59.53 Aligned_cols=101 Identities=13% Similarity=0.121 Sum_probs=62.3
Q ss_pred HHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 458 EKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 458 ~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.+.. ..
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~------~V~vid~~~~~~~~~~~~~------------------------g~ 64 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH------SVVVVDKNEYAFHRLNSEF------------------------SG 64 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCGGGGGGSCTTC------------------------CS
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHHHHHHHHhcC------------------------CC
Confidence 56678899999999999999999999987 8999997642222221010 11
Q ss_pred eEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHH-cCCcEEEE
Q psy7300 538 NITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVY-SRKPLLES 592 (986)
Q Consensus 538 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~-~~~pli~~ 592 (986)
. .+...... ...+...-+.++|+||.|+.+......+...+.. .+...+-+
T Consensus 65 ~--~~~~d~~~--~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 65 F--TVVGDAAE--FETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp E--EEESCTTS--HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred c--EEEecCCC--HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 1 11111110 0011111246799999999998877777777765 44443333
No 37
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.77 E-value=0.01 Score=56.81 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=64.1
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
+...+|+|+|+|.+|..+++.|...|. +++++|.|. .+++ .+... . +
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~------~V~~id~~~-------------------~~~~----~~~~~--~--~ 50 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK------KVLAVDKSK-------------------EKIE----LLEDE--G--F 50 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHH----HHHHT--T--C
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC------eEEEEECCH-------------------HHHH----HHHHC--C--C
Confidence 345789999999999999999999998 899999652 1222 22221 2 2
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEE
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLES 592 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~ 592 (986)
..+..+... ...+...-..++|+||.++++.+....+-..++..+.+.+-+
T Consensus 51 ~~~~gd~~~--~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 51 DAVIADPTD--ESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp EEEECCTTC--HHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEE
T ss_pred cEEECCCCC--HHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceEEE
Confidence 233333322 111111224689999999999888888888888776554433
No 38
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.76 E-value=0.0066 Score=70.63 Aligned_cols=100 Identities=15% Similarity=0.175 Sum_probs=74.7
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
.|++.+|+|+|.|.+|...++.|..+|. +++++|++... .+ +.+.+ .-.++.+.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~---------------------~~-~~l~~---~~~i~~~~ 62 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP---------------------QF-TVWAN---EGMLTLVE 62 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH---------------------HH-HHHHT---TTSCEEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH---------------------HH-HHHHh---cCCEEEEE
Confidence 3678999999999999999999999996 79999974211 01 11211 11345555
Q ss_pred CCCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeecccc
Q psy7300 152 GELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRGL 197 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G~ 197 (986)
....++.+.++|+||.+++.......+...|++.+||+-.++--.+
T Consensus 63 ~~~~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~ 108 (457)
T 1pjq_A 63 GPFDETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKA 108 (457)
T ss_dssp SSCCGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTS
T ss_pred CCCCccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCccc
Confidence 6667777889999999999887788899999999999655554443
No 39
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.76 E-value=0.011 Score=57.81 Aligned_cols=100 Identities=23% Similarity=0.187 Sum_probs=64.4
Q ss_pred HHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEe
Q psy7300 70 MRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKA 149 (986)
Q Consensus 70 q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~ 149 (986)
-+++...+|+|+|+|.+|..+++.|...|. .++++|.+.-....+... ..+.+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~------------------------~g~~~-- 66 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSE------------------------FSGFT-- 66 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTT------------------------CCSEE--
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhc------------------------CCCcE--
Confidence 356678899999999999999999999997 899999754222221100 01111
Q ss_pred ecCCC-CHh-----hhccccEEEEecCCHHHHHHHHHHHHH-cCCcEEEeeccc
Q psy7300 150 YTGEL-SEA-----FIKKFRVVVLTNSTYDEQLAISQITHA-NDIALIIADTRG 196 (986)
Q Consensus 150 ~~~~~-~~~-----~l~~~dvVI~~~~~~~~~~~i~~~c~~-~~ip~I~~~~~G 196 (986)
...+. +.+ -+.++|+||.|+.+......+...++. .+...|.+.+.+
T Consensus 67 ~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 67 VVGDAAEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp EESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred EEecCCCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 00000 111 145789999999887777777778887 666666655544
No 40
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.71 E-value=0.013 Score=56.20 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=63.9
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+...+|+|+|+|.+|..+++.|...|. .++++|.+. .+++ .+.+. .+. ....
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~~----~~~~~--~~~--~~~g 55 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKIE----LLEDE--GFD--AVIA 55 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHH----HHHHT--TCE--EEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHHH----HHHHC--CCc--EEEC
Confidence 345799999999999999999999997 799999642 1222 22222 222 2233
Q ss_pred CC-CHhh-----hccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeec
Q psy7300 153 EL-SEAF-----IKKFRVVVLTNSTYDEQLAISQITHANDIALIIADT 194 (986)
Q Consensus 153 ~~-~~~~-----l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~ 194 (986)
+. +++. +.++|+||.+..+.+....+...+++.+.+.|.+..
T Consensus 56 d~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 56 DPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp CTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceEEEEE
Confidence 33 3333 357899999998877777778888887766555543
No 41
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.68 E-value=0.012 Score=55.94 Aligned_cols=98 Identities=17% Similarity=0.237 Sum_probs=60.5
Q ss_pred HHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee
Q psy7300 71 RRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY 150 (986)
Q Consensus 71 ~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~ 150 (986)
.++...+|+|+|+|++|..+++.|...|. +++++|.+.- ++ +.+++. ...+ .
T Consensus 2 ~~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~-------------------~~----~~~~~~--~~~~--~ 53 (144)
T 2hmt_A 2 GRIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEE-------------------KV----NAYASY--ATHA--V 53 (144)
T ss_dssp ----CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHH-------------------HH----HTTTTT--CSEE--E
T ss_pred CCCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHH-------------------HH----HHHHHh--CCEE--E
Confidence 35667899999999999999999999996 6888886421 11 111111 1111 1
Q ss_pred cCCC-CHh-----hhccccEEEEecCCH-HHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 151 TGEL-SEA-----FIKKFRVVVLTNSTY-DEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 151 ~~~~-~~~-----~l~~~dvVI~~~~~~-~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
..+. +.+ -+.++|+||.+..+. .....+...+++.+.+.|.+.+.+
T Consensus 54 ~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 54 IANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp ECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred EeCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 1111 121 146789999998763 555567778888877655554443
No 42
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.62 E-value=0.011 Score=54.26 Aligned_cols=90 Identities=21% Similarity=0.180 Sum_probs=62.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
..+|+|+|+|++|..+++.|...|..+++++|.+. .+++. +. .+.+.+.. .++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~----~~--~~~~~~~~--~d~ 57 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAV----LN--RMGVATKQ--VDA 57 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHH----HH--TTTCEEEE--CCT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHH----HH--hCCCcEEE--ecC
Confidence 45899999999999999999999977899998631 12222 22 23333322 222
Q ss_pred -C----HhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEe
Q psy7300 155 -S----EAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIA 192 (986)
Q Consensus 155 -~----~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~ 192 (986)
+ .+.++++|+||.|.. ......+.+.|.+.+++++..
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~-~~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAP-FFLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSC-GGGHHHHHHHHHHTTCEEECC
T ss_pred CCHHHHHHHHcCCCEEEECCC-chhhHHHHHHHHHhCCCEEEe
Confidence 1 235678999999984 344567788899999887754
No 43
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.56 E-value=0.0066 Score=57.79 Aligned_cols=95 Identities=14% Similarity=0.170 Sum_probs=57.0
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
++..++|+|+|+|++|..+++.|...|. +++++|.+.-....+. +. ..
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~------~v~~~d~~~~~~~~~~-----------------------~~--~~- 50 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH------EVLAVDINEEKVNAYA-----------------------SY--AT- 50 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC------CCEEEESCHHHHHTTT-----------------------TT--CS-
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCHHHHHHHH-----------------------Hh--CC-
Confidence 4567789999999999999999999987 7899987632111111 11 11
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcCCCH-HHHHHHHHHHHHcCCc
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANALDNV-EARIYMDRRCVYSRKP 588 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~-~ar~~l~~~c~~~~~p 588 (986)
..+..+... ...+...-+.++|+|+.++.+. .....+...+...+.+
T Consensus 51 -~~~~~d~~~--~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ 98 (144)
T 2hmt_A 51 -HAVIANATE--ENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIP 98 (144)
T ss_dssp -EEEECCTTC--HHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred -EEEEeCCCC--HHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCC
Confidence 112222211 1111111256899999999874 5555666777766544
No 44
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.41 E-value=0.0072 Score=65.28 Aligned_cols=111 Identities=16% Similarity=0.289 Sum_probs=67.6
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCcc--ccCcCCCCCCCcHHHHHHHHHHh-hCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNR--QFLFRPHDVQQPKSATAAKAIKV-MNP 535 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnR--qflf~~~diG~~Ka~~a~~~l~~-~np 535 (986)
.|++++|+|||+|.+|...++.|...|. +++|+|++.-+. +.. +-+.. +-+. ++. ....++ +++
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga------~VtViap~~~~~--l~~~~~~l~~--~~~~-~~~--~~~~~~~~~~ 76 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC------KLTLVSPDLHKS--IIPKFGKFIQ--NKDQ-PDY--REDAKRFINP 76 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC------EEEEEEEEECTT--HHHHHCGGGC----------------CEEECT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC------EEEEEcCCCCcc--hhHHHHHHHh--cccc-ccc--cchhhccccc
Confidence 4678999999999999999999999997 999999865211 100 00000 0000 000 000000 111
Q ss_pred C-----ceE-EEEEcccCCcccccccccccc------CCCEEEEcCCCHHHHHHHHHHHHHc---CCcEE
Q psy7300 536 N-----VNI-TYHENRVGPETEKVYDDLFFE------SLDGIANALDNVEARIYMDRRCVYS---RKPLL 590 (986)
Q Consensus 536 ~-----~~i-~~~~~~v~~~~~~~~~~~f~~------~~DvVi~a~Dn~~ar~~l~~~c~~~---~~pli 590 (986)
. -.| +.+... |.+..+. ++|+|+.|+|+.+....+-..|+.. ++|+-
T Consensus 77 ~~~~~~g~i~~~i~~~--------~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VN 138 (274)
T 1kyq_A 77 NWDPTKNEIYEYIRSD--------FKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVN 138 (274)
T ss_dssp TCCTTSCCCSEEECSS--------CCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred ccccccCCeeEEEcCC--------CCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEE
Confidence 1 122 222222 2334455 8999999999998888999999998 77763
No 45
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.39 E-value=0.0076 Score=57.16 Aligned_cols=90 Identities=16% Similarity=0.132 Sum_probs=56.6
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
.+|+|+|+|.+|..+++.|...|. +++++|.+.- +.+ .+.+.. .+ ..+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~------~v~~~d~~~~-------------------~~~----~~~~~~-~~--~~~ 52 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH------DIVLIDIDKD-------------------ICK----KASAEI-DA--LVI 52 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HHH----HHHHHC-SS--EEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHH-------------------HHH----HHHHhc-Cc--EEE
Confidence 589999999999999999999987 8999986431 111 122111 12 222
Q ss_pred EcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcC
Q psy7300 543 ENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSR 586 (986)
Q Consensus 543 ~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~ 586 (986)
...... ...+......++|+|+.|+.+......+...+...+
T Consensus 53 ~~d~~~--~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 53 NGDCTK--IKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp ESCTTS--HHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred EcCCCC--HHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 222211 111111225689999999998776666666666654
No 46
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.26 E-value=0.0096 Score=58.12 Aligned_cols=99 Identities=9% Similarity=0.106 Sum_probs=65.0
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
|.+.+|+|+|+|.+|..+++.|...|. .++++|.+.- .+++.+.+.+ ...+.+ +..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~~~~~~~~---~~~~~~--i~g 56 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDIKQLEQRL---GDNADV--IPG 56 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHHHHHHHHH---CTTCEE--EES
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHHHHHHHhh---cCCCeE--EEc
Confidence 356799999999999999999999996 6999996420 1222222221 123333 233
Q ss_pred CC-CHh-----hhccccEEEEecCCHHHHHHHHHHHHHc-CCcEEEeecc
Q psy7300 153 EL-SEA-----FIKKFRVVVLTNSTYDEQLAISQITHAN-DIALIIADTR 195 (986)
Q Consensus 153 ~~-~~~-----~l~~~dvVI~~~~~~~~~~~i~~~c~~~-~ip~I~~~~~ 195 (986)
+. +++ -+.++|+||.++.+.+....+...+++. +.+.|.+...
T Consensus 57 d~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 57 DSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp CTTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECS
T ss_pred CCCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 32 222 2568999999998877777788888876 5444544433
No 47
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.22 E-value=0.014 Score=60.85 Aligned_cols=101 Identities=14% Similarity=0.123 Sum_probs=63.3
Q ss_pred HHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhC
Q psy7300 456 FQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMN 534 (986)
Q Consensus 456 ~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~n 534 (986)
.+.+|.+++|+|.|+ |+||.++++.|+..|. ++++++.+.- +... +..
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~------~V~~~~R~~~-------------------~~~~----~~~-- 63 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH------EPVAMVRNEE-------------------QGPE----LRE-- 63 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSGG-------------------GHHH----HHH--
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC------eEEEEECChH-------------------HHHH----HHh--
Confidence 356789999999998 9999999999999997 8999875421 1111 111
Q ss_pred CCceE-EEEEcccCCccccccccccccCCCEEEEcCC-------------CHHHHHHHHHHHHHcCCc-EEEEee
Q psy7300 535 PNVNI-TYHENRVGPETEKVYDDLFFESLDGIANALD-------------NVEARIYMDRRCVYSRKP-LLESGT 594 (986)
Q Consensus 535 p~~~i-~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-------------n~~ar~~l~~~c~~~~~p-li~~g~ 594 (986)
+ .+ +.+..++. +.+ .+.+.++|+||++.. |..+-..+-+.|.+.+.+ +|..++
T Consensus 64 ~--~~~~~~~~Dl~---~~~--~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 64 R--GASDIVVANLE---EDF--SHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp T--TCSEEEECCTT---SCC--GGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCceEEEcccH---HHH--HHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 1 24 45555554 112 456789999998865 344445666777776643 555555
No 48
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.14 E-value=0.01 Score=65.41 Aligned_cols=83 Identities=14% Similarity=0.080 Sum_probs=57.7
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
+.+++++|+|+||+|..++..|+..|+ ++|+|++.+. --..|++.+++.+....+ +.+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga-----~~V~i~nR~~----------------~~~~~a~~la~~~~~~~~-~~~ 209 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGV-----KEISIFNRKD----------------DFYANAEKTVEKINSKTD-CKA 209 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------TTHHHHHHHHHHHHHHSS-CEE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhhcC-Cce
Confidence 578899999999999999999999999 6999986441 002567777777776554 445
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANAL 569 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~ 569 (986)
.+..- .+ .+.. .+.+.++|+||||+
T Consensus 210 ~~~~~--~~-~~~l--~~~l~~aDiIINaT 234 (315)
T 3tnl_A 210 QLFDI--ED-HEQL--RKEIAESVIFTNAT 234 (315)
T ss_dssp EEEET--TC-HHHH--HHHHHTCSEEEECS
T ss_pred EEecc--ch-HHHH--HhhhcCCCEEEECc
Confidence 44431 11 0001 23456899999996
No 49
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.14 E-value=0.029 Score=54.61 Aligned_cols=94 Identities=11% Similarity=0.059 Sum_probs=61.9
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
.+.+|+|+|+|.+|..+++.|...|. .++++|.|.-+ +.+.+.+ ....++ .
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~------~V~vid~~~~~------------------~~~~~~~---~~~~~~--~ 52 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ------NVTVISNLPED------------------DIKQLEQ---RLGDNA--D 52 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC------CEEEEECCCHH------------------HHHHHHH---HHCTTC--E
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------CEEEEECCChH------------------HHHHHHH---hhcCCC--e
Confidence 45789999999999999999999997 89999975210 1111111 111223 3
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHc
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYS 585 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~ 585 (986)
.+..+... ...+...-+.++|+|+.++++.+....+...++..
T Consensus 53 ~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 53 VIPGDSND--SSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EEESCTTS--HHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEcCCCC--HHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 34333322 12222233688999999999988777887777765
No 50
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.13 E-value=0.012 Score=67.19 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=69.4
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
++|+|+|||++|..+++.|+..|-. ...++++|.+. .|++.+++.+....+ .++..+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~---~~~V~v~~r~~-------------------~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREV---FSHITLASRTL-------------------SKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTT---CCEEEEEESCH-------------------HHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC---ceEEEEEECCH-------------------HHHHHHHHHhhhhcC-CceEEE
Confidence 4899999999999999999987620 02788887542 456666666554321 234455
Q ss_pred EcccCCccccccccccccC--CCEEEEcCCCHHHHHHHHHHHHHcCCcEEEE
Q psy7300 543 ENRVGPETEKVYDDLFFES--LDGIANALDNVEARIYMDRRCVYSRKPLLES 592 (986)
Q Consensus 543 ~~~v~~~~~~~~~~~f~~~--~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~ 592 (986)
..++.+.. .. .+++++ .|+||+|+.... ...+.+.|.+.++.+++.
T Consensus 59 ~~D~~d~~-~l--~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDADSIE-EL--VALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCTTCHH-HH--HHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecCCCHH-HH--HHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 55554221 11 344555 899999987543 456778999999999984
No 51
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.12 E-value=0.017 Score=67.23 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=67.8
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
.|++++|+|||.|.+|...++.|...|. +++|+|.+.-+ .+.+... .. .
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga------~V~vi~~~~~~---------------------~~~~l~~--~~--~ 57 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA------RLTVNALTFIP---------------------QFTVWAN--EG--M 57 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB------EEEEEESSCCH---------------------HHHHHHT--TT--S
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEcCCCCH---------------------HHHHHHh--cC--C
Confidence 3678999999999999999999999997 99999975211 0111111 12 2
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcE
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPL 589 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pl 589 (986)
|+.+... |.+..+.++|+||.|+|+.+....+-..|++.++|+
T Consensus 58 i~~~~~~--------~~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 58 LTLVEGP--------FDETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp CEEEESS--------CCGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred EEEEECC--------CCccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 3333332 234556799999999999988888999999999985
No 52
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.11 E-value=0.011 Score=65.06 Aligned_cols=81 Identities=11% Similarity=0.163 Sum_probs=57.8
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+++++|+|+|+||.|..++..|...|+++|+|++.+.- ...||+.+++.+....+ +.+.....
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~----------------~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD----------------FFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------HHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc----------------hHHHHHHHHHHhhhccC-cceEEech
Confidence 56789999999999999999999999999999986410 12478888888776543 33433321
Q ss_pred -CC--CHhhhccccEEEEecC
Q psy7300 153 -EL--SEAFIKKFRVVVLTNS 170 (986)
Q Consensus 153 -~~--~~~~l~~~dvVI~~~~ 170 (986)
++ ..+.+.++|+||.|+.
T Consensus 209 ~~l~~~~~~l~~~DiIINaTp 229 (312)
T 3t4e_A 209 ADQHAFTEALASADILTNGTK 229 (312)
T ss_dssp TCHHHHHHHHHHCSEEEECSS
T ss_pred HhhhhhHhhccCceEEEECCc
Confidence 11 0345667888887763
No 53
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.07 E-value=0.011 Score=63.79 Aligned_cols=73 Identities=19% Similarity=0.284 Sum_probs=57.4
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
+.+++++|+|+||.+..++-.|+..|+ .+|+|++.+ ..|++.+++.+....|...+
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~-----~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGI-----ASITLCDPS-------------------TARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCC-----CeEEEeCCC-------------------HHHHHHHHHHHhccCCccee
Confidence 467899999999999999999999999 799998532 25788888888888877654
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANAL 569 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~ 569 (986)
... ..-.+++|+||||+
T Consensus 179 ~~~-------------~~~~~~~dliiNaT 195 (269)
T 3tum_A 179 STQ-------------FSGLEDFDLVANAS 195 (269)
T ss_dssp ESC-------------CSCSTTCSEEEECS
T ss_pred hhh-------------hhhhhcccccccCC
Confidence 211 12246789999996
No 54
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.03 E-value=0.015 Score=62.77 Aligned_cols=74 Identities=24% Similarity=0.317 Sum_probs=59.8
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
++.++|+|+|+||.+..++..|...|+++|+|++.+ ..|++.+++.+....+...+.....
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~~~~ 183 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVSTQFS 183 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEESCCS
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehhhhh
Confidence 367899999999999999999999999999999753 2488999999998888776654322
Q ss_pred CCCHhhhccccEEEEecC
Q psy7300 153 ELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~ 170 (986)
-+.++|+||.|+.
T Consensus 184 -----~~~~~dliiNaTp 196 (269)
T 3tum_A 184 -----GLEDFDLVANASP 196 (269)
T ss_dssp -----CSTTCSEEEECSS
T ss_pred -----hhhcccccccCCc
Confidence 2457899998773
No 55
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.02 E-value=0.014 Score=64.29 Aligned_cols=81 Identities=16% Similarity=0.227 Sum_probs=58.4
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
++.++|+|+|+||+|..++..|...|+++|+|++.+.- -..||+.+++.+.+..+ +.+....-
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~----------------~~~~a~~la~~~~~~~~-~~~~~~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDD----------------FYANAEKTVEKINSKTD-CKAQLFDI 214 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------THHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCc----------------hHHHHHHHHHHhhhhcC-CceEEecc
Confidence 56789999999999999999999999999999986410 02478888888876553 44444321
Q ss_pred C-CC--HhhhccccEEEEecC
Q psy7300 153 E-LS--EAFIKKFRVVVLTNS 170 (986)
Q Consensus 153 ~-~~--~~~l~~~dvVI~~~~ 170 (986)
+ .+ .+.+.++|+||.|+.
T Consensus 215 ~~~~~l~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 215 EDHEQLRKEIAESVIFTNATG 235 (315)
T ss_dssp TCHHHHHHHHHTCSEEEECSS
T ss_pred chHHHHHhhhcCCCEEEECcc
Confidence 1 11 234567888887763
No 56
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.01 E-value=0.017 Score=65.10 Aligned_cols=94 Identities=12% Similarity=0.193 Sum_probs=63.2
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
++.||+|+|||.+|..+++.|+.. ..++++|.+. +.+.+..+.+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~--------------------------~~~~~~~~~~~-- 59 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN--------------------------ENLEKVKEFAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH--------------------------HHHHHHTTTSE--
T ss_pred CccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH--------------------------HHHHHHhccCC--
Confidence 456899999999999999999742 4788887432 11222233322
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEe
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESG 593 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g 593 (986)
++..++.+. +.. .++++++|+||+|+... ....+.+.|.+.++.+++..
T Consensus 60 ~~~~d~~d~-~~l--~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 60 PLKVDASNF-DKL--VEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTCH-HHH--HHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred cEEEecCCH-HHH--HHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 233333321 111 46789999999999765 24578899999999999964
No 57
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.88 E-value=0.017 Score=63.72 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=56.4
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
+.+++++|+|+||+|..++..|+..|+ ++|+|++.+. -...|++.+++.+....+ ..+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~-----~~v~v~nRt~----------------~~~~~a~~la~~~~~~~~-~~v 203 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGI-----KEIKLFNRKD----------------DFFEKAVAFAKRVNENTD-CVV 203 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------THHHHHHHHHHHHHHHSS-CEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhccC-cce
Confidence 578899999999999999999999999 6999986431 002567777777766543 344
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
..+.. .+. + . ..+.+.++|+||||+-
T Consensus 204 ~~~~~--~~l-~-~-~~~~l~~~DiIINaTp 229 (312)
T 3t4e_A 204 TVTDL--ADQ-H-A-FTEALASADILTNGTK 229 (312)
T ss_dssp EEEET--TCH-H-H-HHHHHHHCSEEEECSS
T ss_pred EEech--Hhh-h-h-hHhhccCceEEEECCc
Confidence 43321 100 0 0 0234567899999963
No 58
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.82 E-value=0.021 Score=59.20 Aligned_cols=92 Identities=9% Similarity=0.071 Sum_probs=60.7
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
++|+|+|+|.+|..+++.|...|. .++++|.|. .+++ .+.+. .+ +..+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~------~v~vid~~~-------------------~~~~----~l~~~-~~--~~~i 48 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY------GVVIINKDR-------------------ELCE----EFAKK-LK--ATII 48 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHH----HHHHH-SS--SEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCH-------------------HHHH----HHHHH-cC--CeEE
Confidence 479999999999999999999998 899999653 1111 11111 12 2234
Q ss_pred EcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHH-cCCc
Q psy7300 543 ENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVY-SRKP 588 (986)
Q Consensus 543 ~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~-~~~p 588 (986)
..+... ...+...-+.++|+|+.++++......+...++. ++.+
T Consensus 49 ~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~ 93 (218)
T 3l4b_C 49 HGDGSH--KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVK 93 (218)
T ss_dssp ESCTTS--HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCC
T ss_pred EcCCCC--HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCC
Confidence 333322 1122223367899999999998887777777765 4443
No 59
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.80 E-value=0.01 Score=68.47 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=67.0
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcC-CCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMG-VGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~G-v~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
-..||+|+|+|+||+.++..|++.+ +. -..|+++|.+... +.. .+. . .+++
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~~dv~---~~~I~vaD~~~~~----------------~~~----~~~---~--g~~~ 63 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEKFDIK---PSQVTIIAAEGTK----------------VDV----AQQ---Y--GVSF 63 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHHBCCC---GGGEEEEESSCCS----------------CCH----HHH---H--TCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCc---eeEEEEeccchhh----------------hhH----Hhh---c--CCce
Confidence 3568999999999999999999864 30 1478998855422 110 111 1 2333
Q ss_pred EEEEcccCCccc-cccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeec
Q psy7300 540 TYHENRVGPETE-KVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTL 595 (986)
Q Consensus 540 ~~~~~~v~~~~~-~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~ 595 (986)
....++.++. ... ..++++.|+|||+...... ..+-+.|.+.|+-+|+....
T Consensus 64 --~~~~Vdadnv~~~l-~aLl~~~DvVIN~s~~~~~-l~Im~acleaGv~YlDTa~E 116 (480)
T 2ph5_A 64 --KLQQITPQNYLEVI-GSTLEENDFLIDVSIGISS-LALIILCNQKGALYINAATE 116 (480)
T ss_dssp --EECCCCTTTHHHHT-GGGCCTTCEEEECCSSSCH-HHHHHHHHHHTCEEEESSCC
T ss_pred --eEEeccchhHHHHH-HHHhcCCCEEEECCccccC-HHHHHHHHHcCCCEEECCCC
Confidence 3334443321 111 2355666999998766543 56788999999999999864
No 60
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.77 E-value=0.03 Score=52.90 Aligned_cols=86 Identities=17% Similarity=0.211 Sum_probs=56.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC-
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL- 154 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~- 154 (986)
.+|+|+|+|.+|..+++.|...|. +++++|.+. .+++. +.+.. .+. ....+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~-------------------~~~~~----~~~~~-~~~--~~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK-------------------DICKK----ASAEI-DAL--VINGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHH----HHHHC-SSE--EEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHHH----HHHhc-CcE--EEEcCCC
Confidence 589999999999999999999995 699998532 12222 22111 222 112222
Q ss_pred CHh-----hhccccEEEEecCCHHHHHHHHHHHHHcCCc
Q psy7300 155 SEA-----FIKKFRVVVLTNSTYDEQLAISQITHANDIA 188 (986)
Q Consensus 155 ~~~-----~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip 188 (986)
+.+ .+.++|+||.|..+......+...++..+..
T Consensus 58 ~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~ 96 (140)
T 1lss_A 58 KIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGIN 96 (140)
T ss_dssp SHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcCCC
Confidence 222 2568999999988766656666777776644
No 61
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.52 E-value=0.027 Score=60.88 Aligned_cols=73 Identities=19% Similarity=0.303 Sum_probs=53.4
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+++++|+|+|+||.|..++..|...|++++++++.+. .|++.+++.+.. ..+.+....
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~-------------------~~a~~la~~~~~--~~~~~~~~~- 175 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM-------------------AKALALRNELDH--SRLRISRYE- 175 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH-------------------HHHHHHHHHHCC--TTEEEECSG-
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH-------------------HHHHHHHHHhcc--CCeeEeeHH-
Confidence 5678999999999999999999999999999997532 377777777755 223322211
Q ss_pred CCCHhhhccccEEEEecC
Q psy7300 153 ELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~ 170 (986)
++.. .++|+||.|+.
T Consensus 176 ~l~~---~~~DivInaTp 190 (272)
T 3pwz_A 176 ALEG---QSFDIVVNATS 190 (272)
T ss_dssp GGTT---CCCSEEEECSS
T ss_pred Hhcc---cCCCEEEECCC
Confidence 1111 67899998874
No 62
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.46 E-value=0.067 Score=53.55 Aligned_cols=91 Identities=9% Similarity=0.082 Sum_probs=58.3
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.|. .|++ .+++. ++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~------~V~vid~~~-------------------~~~~----~~~~~--g~~ 85 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK------ISLGIEIRE-------------------EAAQ----QHRSE--GRN 85 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS------CEEEEESCH-------------------HHHH----HHHHT--TCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC------eEEEEECCH-------------------HHHH----HHHHC--CCC
Confidence 4577999999999999999999998 98 899998654 1111 12222 222
Q ss_pred EEEEEcccCCcccccccccc--ccCCCEEEEcCCCHHHHHHHHHHHHHcC
Q psy7300 539 ITYHENRVGPETEKVYDDLF--FESLDGIANALDNVEARIYMDRRCVYSR 586 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f--~~~~DvVi~a~Dn~~ar~~l~~~c~~~~ 586 (986)
.+..+..+ ...+ .+. ..++|+||.++.+...-..+-..++..+
T Consensus 86 --~~~gd~~~--~~~l-~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 86 --VISGDATD--PDFW-ERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp --EEECCTTC--HHHH-HTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred --EEEcCCCC--HHHH-HhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 22222221 1111 122 5789999999998776665555565544
No 63
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.46 E-value=0.042 Score=55.06 Aligned_cols=92 Identities=14% Similarity=0.163 Sum_probs=59.9
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILS-GVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~-GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.+. .|++ .+++.. +.+ ..
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~~----~~~~~g--~~~--~~ 88 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAAQ----QHRSEG--RNV--IS 88 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHHH----HHHHTT--CCE--EE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHHH----HHHHCC--CCE--EE
Confidence 4577999999999999999999999 97 688998643 1222 233322 222 11
Q ss_pred CCC-CHh----h--hccccEEEEecCCHHHHHHHHHHHHHcC-CcEEEe
Q psy7300 152 GEL-SEA----F--IKKFRVVVLTNSTYDEQLAISQITHAND-IALIIA 192 (986)
Q Consensus 152 ~~~-~~~----~--l~~~dvVI~~~~~~~~~~~i~~~c~~~~-ip~I~~ 192 (986)
.+. +++ . +.++|+||.+..+......+-..++..+ ...|.+
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 121 222 2 5678999999887666666666777765 334444
No 64
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.29 E-value=0.044 Score=61.75 Aligned_cols=94 Identities=12% Similarity=0.180 Sum_probs=62.0
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
++++|+|+|+|++|..+++.|+.. . .++|.|.+. .|++.++ ....
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~------~V~V~~R~~-------------------~~a~~la-------~~~~-- 59 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F------DVYIGDVNN-------------------ENLEKVK-------EFAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S------EEEEEESCH-------------------HHHHHHT-------TTSE--
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-C------eEEEEECCH-------------------HHHHHHH-------hhCC--
Confidence 578999999999999999999976 4 789987542 2222222 1111
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEe
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESG 593 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g 593 (986)
+...++... +.. .+.++++|+||+|+-... ...+...|.+.++.+++..
T Consensus 60 ~~~~d~~~~-~~l--~~ll~~~DvVIn~~P~~~-~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 60 PLKVDASNF-DKL--VEVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTCH-HHH--HHHHTTCSCEEECCCHHH-HHHHHHHHHHTTCCEEECC
T ss_pred eEEEecCCH-HHH--HHHHhCCCEEEECCChhh-hHHHHHHHHHhCCeEEEcc
Confidence 122222211 111 356789999999976442 2347789999999999854
No 65
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.28 E-value=0.039 Score=59.88 Aligned_cols=74 Identities=19% Similarity=0.327 Sum_probs=55.3
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+.+++|+|+|+||.|..++..|...|+.++++++.+. .|++.+++.+.... .+.+....
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~-------------------~~a~~la~~~~~~~-~~~~~~~~- 182 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF-------------------AKAEQLAELVAAYG-EVKAQAFE- 182 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH-------------------HHHHHHHHHHGGGS-CEEEEEGG-
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH-------------------HHHHHHHHHhhccC-CeeEeeHH-
Confidence 4688999999999999999999999999999998532 47777777776543 23332211
Q ss_pred CCCHhhhccccEEEEecCC
Q psy7300 153 ELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~ 171 (986)
+...++|+||.|+..
T Consensus 183 ----~l~~~aDiIInaTp~ 197 (281)
T 3o8q_A 183 ----QLKQSYDVIINSTSA 197 (281)
T ss_dssp ----GCCSCEEEEEECSCC
T ss_pred ----HhcCCCCEEEEcCcC
Confidence 222688999988853
No 66
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.27 E-value=0.021 Score=55.07 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=53.1
Q ss_pred HHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee
Q psy7300 71 RRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY 150 (986)
Q Consensus 71 ~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~ 150 (986)
.+....+|+|+|+|++|..+++.|...|+. ++++|.+. .|++.+++.+. +.+...
T Consensus 17 ~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~-------------------~~~~~~a~~~~-----~~~~~~ 71 (144)
T 3oj0_A 17 RKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNI-------------------DHVRAFAEKYE-----YEYVLI 71 (144)
T ss_dssp HHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCH-------------------HHHHHHHHHHT-----CEEEEC
T ss_pred HhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCH-------------------HHHHHHHHHhC-----CceEee
Confidence 344489999999999999999999999987 99998532 35555444442 233221
Q ss_pred cCCCCHhhhccccEEEEecCCH
Q psy7300 151 TGELSEAFIKKFRVVVLTNSTY 172 (986)
Q Consensus 151 ~~~~~~~~l~~~dvVI~~~~~~ 172 (986)
. + ..+.+.++|+||.|+...
T Consensus 72 ~-~-~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 72 N-D-IDSLIKNNDVIITATSSK 91 (144)
T ss_dssp S-C-HHHHHHTCSEEEECSCCS
T ss_pred c-C-HHHHhcCCCEEEEeCCCC
Confidence 1 1 245678999999998653
No 67
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.26 E-value=0.021 Score=61.74 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=51.0
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+. .|++.+++.+.. ..+
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~-----~~v~i~~R~~-------------------~~a~~la~~~~~----~~~ 169 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGP-----SELVIANRDM-------------------AKALALRNELDH----SRL 169 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCC-----SEEEEECSCH-------------------HHHHHHHHHHCC----TTE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC-----CEEEEEeCCH-------------------HHHHHHHHHhcc----CCe
Confidence 578899999999999999999999998 6999985332 466666555543 223
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
.+.. +. +. .. .++|+||+|+-
T Consensus 170 ~~~~--~~----~l--~~--~~~DivInaTp 190 (272)
T 3pwz_A 170 RISR--YE----AL--EG--QSFDIVVNATS 190 (272)
T ss_dssp EEEC--SG----GG--TT--CCCSEEEECSS
T ss_pred eEee--HH----Hh--cc--cCCCEEEECCC
Confidence 3321 11 11 11 68999999974
No 68
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.25 E-value=0.013 Score=65.90 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=58.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
++.||+|+|+|.+|+.+++.|... ..+++.|.+ ..+++ ++++..+.+.+.+.+.+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~-------------------~~~~~----~~~~~~~~~~~d~~d~~ 69 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN-------------------NENLE----KVKEFATPLKVDASNFD 69 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC-------------------HHHHH----HHTTTSEEEECCTTCHH
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC-------------------HHHHH----HHhccCCcEEEecCCHH
Confidence 345799999999999999998653 567776632 12222 22222211121111100
Q ss_pred CCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEee
Q psy7300 154 LSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIAD 193 (986)
Q Consensus 154 ~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~ 193 (986)
--.++++++|+||.|.... .-..+.+.|.+.++.++...
T Consensus 70 ~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 70 KLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp HHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 0134678999999988654 34578899999999988754
No 69
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.11 E-value=0.033 Score=60.48 Aligned_cols=74 Identities=22% Similarity=0.262 Sum_probs=53.0
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+. .|++.+++.+.... .+
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~~-------------------~~a~~la~~~~~~~---~~ 176 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQP-----ASITVTNRTF-------------------AKAEQLAELVAAYG---EV 176 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCC-----SEEEEEESSH-------------------HHHHHHHHHHGGGS---CE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCC-----CeEEEEECCH-------------------HHHHHHHHHhhccC---Ce
Confidence 578899999999999999999999998 6999986432 46666666665432 23
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDN 571 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn 571 (986)
.+.. + + +.-.++|+||+|+-.
T Consensus 177 ~~~~--~----~-----~l~~~aDiIInaTp~ 197 (281)
T 3o8q_A 177 KAQA--F----E-----QLKQSYDVIINSTSA 197 (281)
T ss_dssp EEEE--G----G-----GCCSCEEEEEECSCC
T ss_pred eEee--H----H-----HhcCCCCEEEEcCcC
Confidence 3331 1 1 112689999999754
No 70
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.09 E-value=0.066 Score=57.40 Aligned_cols=99 Identities=12% Similarity=0.088 Sum_probs=65.4
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
+.++|+|.|+|.||+.+++.|+..|. ++++++.+. +++ .+. ++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~---~~~--------------------------~~~--~~ 44 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH------EVTGLRRSA---QPM--------------------------PAG--VQ 44 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC------CEEEEECTT---SCC--------------------------CTT--CC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCc---ccc--------------------------ccC--Cc
Confidence 45789999999999999999999987 888887542 111 123 33
Q ss_pred EEEcccCCccccccccccccC-CCEEEEcCC------------CHHHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 541 YHENRVGPETEKVYDDLFFES-LDGIANALD------------NVEARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~-~DvVi~a~D------------n~~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
.+..++.+.. .+ ...+++ +|+||.+.. |..+-..+-+.|.+.++ .+|..++.+.+|
T Consensus 45 ~~~~Dl~d~~--~~-~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 45 TLIADVTRPD--TL-ASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp EEECCTTCGG--GC-TTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred eEEccCCChH--HH-HHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 3444554321 11 234555 999998752 44555666777777775 488887776555
No 71
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.03 E-value=0.11 Score=53.27 Aligned_cols=95 Identities=19% Similarity=0.273 Sum_probs=63.7
Q ss_pred cEEEEe-cChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 464 KYFVVG-AGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 464 ~VlvvG-aGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
+|+|.| .|++|.++++.|+..|. ++++++.+.-....+ + .++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~~~~~---------------------------~--~~~~~ 46 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY------QIYAGARKVEQVPQY---------------------------N--NVKAV 46 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC------EEEEEESSGGGSCCC---------------------------T--TEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC------EEEEEECCccchhhc---------------------------C--CceEE
Confidence 799999 58999999999999987 899988653111100 2 35556
Q ss_pred EcccCCccccccccccccCCCEEEEcCC---------CHHHHHHHHHHHHHcCC-cEEEEeec
Q psy7300 543 ENRVGPETEKVYDDLFFESLDGIANALD---------NVEARIYMDRRCVYSRK-PLLESGTL 595 (986)
Q Consensus 543 ~~~v~~~~~~~~~~~f~~~~DvVi~a~D---------n~~ar~~l~~~c~~~~~-pli~~g~~ 595 (986)
..++.+..+.. ...++++|+||++.. |..+-..+-+.|.+.++ .+|..++.
T Consensus 47 ~~D~~d~~~~~--~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 47 HFDVDWTPEEM--AKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp ECCTTSCHHHH--HTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EecccCCHHHH--HHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 66665411111 456788999999865 45555667777887775 46665554
No 72
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.02 E-value=0.11 Score=49.89 Aligned_cols=83 Identities=19% Similarity=0.297 Sum_probs=56.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
+.+|+|+|+|.+|..+++.|...|. .++++|.+. .+++ .+++. .+.+ +..+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~----~~~~~--g~~~--i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR-------------------TRVD----ELRER--GVRA--VLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHH----HHHHT--TCEE--EESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH-------------------HHHH----HHHHc--CCCE--EECCC
Confidence 4689999999999999999999997 799999643 1222 23332 3332 22332
Q ss_pred -CHhh-----hccccEEEEecCCHHHHHHHHHHHHHc
Q psy7300 155 -SEAF-----IKKFRVVVLTNSTYDEQLAISQITHAN 185 (986)
Q Consensus 155 -~~~~-----l~~~dvVI~~~~~~~~~~~i~~~c~~~ 185 (986)
+++. +.++|+||.+..+......+...+++.
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 3333 458899999988766655555566664
No 73
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.01 E-value=0.059 Score=51.67 Aligned_cols=89 Identities=11% Similarity=0.073 Sum_probs=56.6
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
+.+|+|+|+|.+|..+++.|...|. .++++|.|. .+++ .+++ .++ ..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~------~v~vid~~~-------------------~~~~----~~~~--~g~--~~ 53 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI------PLVVIETSR-------------------TRVD----ELRE--RGV--RA 53 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHH----HHHH--TTC--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECCH-------------------HHHH----HHHH--cCC--CE
Confidence 4579999999999999999999998 899999764 1111 2222 122 23
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHc
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYS 585 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~ 585 (986)
+..+... +..+...-..++|+|+.++++...-..+-..++..
T Consensus 54 i~gd~~~--~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 54 VLGNAAN--EEIMQLAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp EESCTTS--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred EECCCCC--HHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 3333321 11111122468999999999876555554455443
No 74
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.98 E-value=0.1 Score=57.56 Aligned_cols=114 Identities=11% Similarity=0.163 Sum_probs=71.8
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN 536 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~ 536 (986)
..+..++|+|.|+ |.||+.+++.|+..|. +++++|...-. .....+.+....+.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~-------------------~~~~~~~~~~~~~~ 75 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ------VVIGLDNFSTG-------------------HQYNLDEVKTLVST 75 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSC-------------------CHHHHHHHHHTSCH
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCCCC-------------------chhhhhhhhhcccc
Confidence 4567899999996 8899999999999987 88888753210 01111222222110
Q ss_pred ---ceEEEEEcccCCccccccccccccCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-cEEEEeec
Q psy7300 537 ---VNITYHENRVGPETEKVYDDLFFESLDGIANALDN-----------------VEARIYMDRRCVYSRK-PLLESGTL 595 (986)
Q Consensus 537 ---~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~-pli~~g~~ 595 (986)
-+++.+..++..... + ...++++|+||.+... +.+-..+-+.|.+.++ .+|..++.
T Consensus 76 ~~~~~~~~~~~Dl~d~~~--~-~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~ 152 (351)
T 3ruf_A 76 EQWSRFCFIEGDIRDLTT--C-EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASS 152 (351)
T ss_dssp HHHTTEEEEECCTTCHHH--H-HHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred ccCCceEEEEccCCCHHH--H-HHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecH
Confidence 245666666653221 1 3567799999988652 1122346677777776 58888777
Q ss_pred CCcc
Q psy7300 596 GTKG 599 (986)
Q Consensus 596 G~~G 599 (986)
+.+|
T Consensus 153 ~vyg 156 (351)
T 3ruf_A 153 STYG 156 (351)
T ss_dssp GGGT
T ss_pred HhcC
Confidence 6555
No 75
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.98 E-value=0.084 Score=53.11 Aligned_cols=100 Identities=15% Similarity=0.017 Sum_probs=61.0
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
+++|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ . .+ +++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~------~V~~~~r~~~~~~~~-----~--------------------~~--~~~ 49 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY------EVTVLVRDSSRLPSE-----G--------------------PR--PAH 49 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCGGGSCSS-----S--------------------CC--CSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC------eEEEEEeChhhcccc-----c--------------------CC--ceE
Confidence 368999998 9999999999999987 899988653211100 0 11 233
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCC----------HHHHHHHHHHHHHcCC-cEEEEeecCC
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDN----------VEARIYMDRRCVYSRK-PLLESGTLGT 597 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn----------~~ar~~l~~~c~~~~~-pli~~g~~G~ 597 (986)
.+..++.+.. .+ ...++++|+||++... ...-..+-+.|.+.+. .+|..++.+.
T Consensus 50 ~~~~D~~~~~-~~--~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~ 114 (206)
T 1hdo_A 50 VVVGDVLQAA-DV--DKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL 114 (206)
T ss_dssp EEESCTTSHH-HH--HHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred EEEecCCCHH-HH--HHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeee
Confidence 4444444221 11 3456778888887542 2334455666777665 3565555443
No 76
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.98 E-value=0.071 Score=54.90 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=65.3
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
++|+|.|+ |+||..+++.|+..|. ++++++.+.-....+ .+ .++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~--------------------------~~--~~~~ 50 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF------EVTAVVRHPEKIKIE--------------------------NE--HLKV 50 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC------EEEEECSCGGGCCCC--------------------------CT--TEEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC------EEEEEEcCcccchhc--------------------------cC--ceEE
Confidence 68999996 8899999999999987 899998764222111 01 3445
Q ss_pred EEcccCCccccccccccccCCCEEEEcCC-----------CHHHHHHHHHHHHHcCC-cEEEEeecCCc
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALD-----------NVEARIYMDRRCVYSRK-PLLESGTLGTK 598 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-----------n~~ar~~l~~~c~~~~~-pli~~g~~G~~ 598 (986)
+..++.+.. .. ...++++|+||++.. |...-..+-+.|...++ .+|..++.+..
T Consensus 51 ~~~Dl~d~~-~~--~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 116 (227)
T 3dhn_A 51 KKADVSSLD-EV--CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSL 116 (227)
T ss_dssp ECCCTTCHH-HH--HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTS
T ss_pred EEecCCCHH-HH--HHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhc
Confidence 555554321 11 355678888888764 34444566777888776 57777766543
No 77
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.88 E-value=0.037 Score=61.76 Aligned_cols=112 Identities=21% Similarity=0.200 Sum_probs=67.3
Q ss_pred HHHHHHhcCcEEEEec-ChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHh
Q psy7300 455 NFQEKLGKLKYFVVGA-GAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKV 532 (986)
Q Consensus 455 ~~q~~L~~~~VlvvGa-GgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~ 532 (986)
.+...+..++|+|.|+ |.||+.+++.|+.. |. +++++|...-....+.
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~~~~~~~~~------------------------ 66 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW------EVFGMDMQTDRLGDLV------------------------ 66 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSC------EEEEEESCCTTTGGGG------------------------
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC------EEEEEeCChhhhhhhc------------------------
Confidence 3345677889999995 99999999999988 76 8999886431111110
Q ss_pred hCCCceEEEEEcccCCccccccccccccCCCEEEEcCCC--HH---------------HHHHHHHHHHHcCCcEEEEeec
Q psy7300 533 MNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDN--VE---------------ARIYMDRRCVYSRKPLLESGTL 595 (986)
Q Consensus 533 ~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn--~~---------------ar~~l~~~c~~~~~pli~~g~~ 595 (986)
..-+++.+..++..+.+.. ...++++|+||.+... .. +-..+-+.|.+.++.+|..++.
T Consensus 67 --~~~~v~~~~~Dl~~d~~~~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~ 142 (372)
T 3slg_A 67 --KHERMHFFEGDITINKEWV--EYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTS 142 (372)
T ss_dssp --GSTTEEEEECCTTTCHHHH--HHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCG
T ss_pred --cCCCeEEEeCccCCCHHHH--HHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcH
Confidence 0124556666665111111 3456789999985432 11 1134566777777778888877
Q ss_pred CCcce
Q psy7300 596 GTKGN 600 (986)
Q Consensus 596 G~~G~ 600 (986)
+.+|.
T Consensus 143 ~vyg~ 147 (372)
T 3slg_A 143 EVYGM 147 (372)
T ss_dssp GGGBS
T ss_pred HHhCC
Confidence 66554
No 78
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.87 E-value=0.028 Score=61.55 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=53.1
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+..++|+|+|+||+|..++..|...|+.++++++.+. .|++.+++.+....+ .+... .
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~-------------------~ka~~la~~~~~~~~--~~~~~-~ 196 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV-------------------EKAERLVREGDERRS--AYFSL-A 196 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH-------------------HHHHHHHHHSCSSSC--CEECH-H
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHhhhccC--ceeeH-H
Confidence 5678999999999999999999999999999998542 366666655533211 11110 0
Q ss_pred CCCHhhhccccEEEEecCC
Q psy7300 153 ELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~ 171 (986)
. ..+.+.++|+||.|+..
T Consensus 197 ~-~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 197 E-AETRLAEYDIIINTTSV 214 (297)
T ss_dssp H-HHHTGGGCSEEEECSCT
T ss_pred H-HHhhhccCCEEEECCCC
Confidence 1 12456788999988753
No 79
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.87 E-value=0.085 Score=60.21 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=67.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhC-C-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSG-V-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~G-V-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
.+|+|+|+|++|..+++.|+..| + ..+++.|.+ ..|++.+++.+....+ ..+.....+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDITTVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEEEec
Confidence 48999999999999999999988 4 689998853 2466666666655431 123333333
Q ss_pred CC-----Hhhhcc--ccEEEEecCCHHHHHHHHHHHHHcCCcEEEe
Q psy7300 154 LS-----EAFIKK--FRVVVLTNSTYDEQLAISQITHANDIALIIA 192 (986)
Q Consensus 154 ~~-----~~~l~~--~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~ 192 (986)
++ .+++++ .|+||.|..... ...+.+.|.+.++.++..
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 32 234555 899999876533 456778899999998864
No 80
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.86 E-value=0.055 Score=55.94 Aligned_cols=93 Identities=16% Similarity=0.171 Sum_probs=63.2
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC-C
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL-S 155 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~-~ 155 (986)
+|+|+|+|.+|..+++.|...|. .++++|.+. .+++.+.+. . .+. ++..+. +
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~~l~~~---~--~~~--~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDR-------------------ELCEEFAKK---L--KAT--IIHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHHHHHHH---S--SSE--EEESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHHHHHHH---c--CCe--EEEcCCCC
Confidence 79999999999999999999997 789999532 133222221 1 222 233332 2
Q ss_pred Hh-----hhccccEEEEecCCHHHHHHHHHHHHH-cCCcEEEeeccc
Q psy7300 156 EA-----FIKKFRVVVLTNSTYDEQLAISQITHA-NDIALIIADTRG 196 (986)
Q Consensus 156 ~~-----~l~~~dvVI~~~~~~~~~~~i~~~c~~-~~ip~I~~~~~G 196 (986)
++ -+.++|+||.++.+......+...+++ ++.+.|.+.+.+
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 22 256899999999887777777788876 566666665443
No 81
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.83 E-value=0.057 Score=59.53 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=28.2
Q ss_pred HHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 456 FQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 456 ~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.++.+.+++|+|.|+ |.||..+++.|+..|. +++++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR------TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC------CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 356788899999998 9999999999999997 88888754
No 82
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.77 E-value=0.027 Score=54.35 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=32.1
Q ss_pred HHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 457 QEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 457 q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..+..+++|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 16 ~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~------~v~v~~r~ 53 (144)
T 3oj0_A 16 VRKNGGNKILLVGNGMLASEIAPYFSYPQY------KVTVAGRN 53 (144)
T ss_dssp HHHHCCCEEEEECCSHHHHHHGGGCCTTTC------EEEEEESC
T ss_pred HHhccCCEEEEECCCHHHHHHHHHHHhCCC------EEEEEcCC
Confidence 344458999999999999999999998887 49998854
No 83
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.64 E-value=0.17 Score=55.19 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=65.9
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+.+++|+|.|+ |+||+++++.|+..|. +++++|.+. .+...+.+.+....+ -+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~ 62 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY------KVRGTARSA-------------------SKLANLQKRWDAKYP-GR 62 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHHST-TT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEeCCc-------------------ccHHHHHHHhhccCC-Cc
Confidence 45678999998 9999999999999987 888877432 123333333333332 23
Q ss_pred EEEE-EcccCCccccccccccccCCCEEEEcCC------C--------HHHHHHHHHHHHH-cC-CcEEEEeecCC
Q psy7300 539 ITYH-ENRVGPETEKVYDDLFFESLDGIANALD------N--------VEARIYMDRRCVY-SR-KPLLESGTLGT 597 (986)
Q Consensus 539 i~~~-~~~v~~~~~~~~~~~f~~~~DvVi~a~D------n--------~~ar~~l~~~c~~-~~-~pli~~g~~G~ 597 (986)
++.+ ..++.... .+ ..+++++|+||++.. + +.+-..+-+.|.. .+ ..+|..++.+.
T Consensus 63 ~~~~~~~D~~d~~--~~-~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~ 135 (342)
T 1y1p_A 63 FETAVVEDMLKQG--AY-DEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVS 135 (342)
T ss_dssp EEEEECSCTTSTT--TT-TTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGG
T ss_pred eEEEEecCCcChH--HH-HHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHH
Confidence 5555 45554321 11 355678999998753 1 2223345566663 33 35666666543
No 84
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.59 E-value=0.067 Score=59.20 Aligned_cols=77 Identities=19% Similarity=0.199 Sum_probs=53.0
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC----CCCEE
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN----PYVST 147 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN----p~V~v 147 (986)
+|+..+|.|+|+|.+|+.+|..|+..|.++++|+|-+. .|++.....|++.+ ..+++
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v 64 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE-------------------GTPQGKGLDIAESSPVDGFDAKF 64 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHHTCCCCE
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc-------------------hhHHHHHHHHhchhhhcCCCCEE
Confidence 46678999999999999999999999988899999543 13333333344332 24455
Q ss_pred EeecCCCCHhhhccccEEEEecC
Q psy7300 148 KAYTGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 148 ~~~~~~~~~~~l~~~dvVI~~~~ 170 (986)
....+ .+-++++|+||.+..
T Consensus 65 ~~t~d---~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 65 TGAND---YAAIEGADVVIVTAG 84 (324)
T ss_dssp EEESS---GGGGTTCSEEEECCS
T ss_pred EEeCC---HHHHCCCCEEEEccC
Confidence 54332 356789999999863
No 85
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.55 E-value=0.037 Score=64.34 Aligned_cols=97 Identities=14% Similarity=0.144 Sum_probs=67.0
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
.+||+|+|+|-+|..+++.|...|. .+++||.|.=... .+.+. ..+..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~------~v~vId~d~~~~~-----------------------~~~~~---~~~~~ 50 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN------DITIVDKDGDRLR-----------------------ELQDK---YDLRV 50 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE------EEEEEESCHHHHH-----------------------HHHHH---SSCEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHHHHH-----------------------HHHHh---cCcEE
Confidence 4689999999999999999998887 8999998752211 22211 12344
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHc-CCcEEEE
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYS-RKPLLES 592 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~-~~pli~~ 592 (986)
+..+... .+.+...-.+.+|+++.++++.++-..+...++.. +.|-+-+
T Consensus 51 i~Gd~~~--~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~ia 100 (461)
T 4g65_A 51 VNGHASH--PDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIA 100 (461)
T ss_dssp EESCTTC--HHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEE
T ss_pred EEEcCCC--HHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCcccee
Confidence 4444332 22233344688999999999999888888888764 6654433
No 86
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.55 E-value=0.11 Score=57.11 Aligned_cols=37 Identities=22% Similarity=0.493 Sum_probs=32.0
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~------~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH------EILVIDNF 53 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTC------EEEEEECC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3566789999998 9999999999999987 89998864
No 87
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.41 E-value=0.037 Score=62.36 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=60.0
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCE-EEeecC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVS-TKAYTG 152 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~-v~~~~~ 152 (986)
++++|+|+|+|++|..++++|+.. ..+++.|.+. .|++.+++. .. +.....
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la~~-------~~~~~~d~~ 66 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVKEF-------ATPLKVDAS 66 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHTTT-------SEEEECCTT
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHHhh-------CCeEEEecC
Confidence 578999999999999999999988 6788888532 233333221 11 111111
Q ss_pred CC--CHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEee
Q psy7300 153 EL--SEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIAD 193 (986)
Q Consensus 153 ~~--~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~ 193 (986)
+. -.+.++++|+||.|.. ......+...|.+.++.++...
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P-~~~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALP-GFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCC-HHHHHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHHHHhCCCEEEECCC-hhhhHHHHHHHHHhCCeEEEcc
Confidence 11 1356788999999864 3333457788888888887744
No 88
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=94.40 E-value=0.052 Score=58.91 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=68.1
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
++.++|+|+|+||.|..++..|...|+++|+|++.+.-....+...+- .+. .+.+.++..++-|++...
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~----~~~-------~~~l~~l~~DivInaTp~ 188 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK----VIS-------YDELSNLKGDVIINCTPK 188 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE----EEE-------HHHHTTCCCSEEEECSST
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC----ccc-------HHHHHhccCCEEEECCcc
Confidence 567899999999999999999999999999999976433233332220 000 011222344555554321
Q ss_pred ---------CCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEE
Q psy7300 153 ---------ELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALI 190 (986)
Q Consensus 153 ---------~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I 190 (986)
.++.+.++...+|++...++. ...+.+.+++.|.+.+
T Consensus 189 Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~-~T~ll~~A~~~G~~~~ 234 (282)
T 3fbt_A 189 GMYPKEGESPVDKEVVAKFSSAVDLIYNPV-ETLFLKYARESGVKAV 234 (282)
T ss_dssp TSTTSTTCCSSCHHHHTTCSEEEESCCSSS-SCHHHHHHHHTTCEEE
T ss_pred CccCCCccCCCCHHHcCCCCEEEEEeeCCC-CCHHHHHHHHCcCeEe
Confidence 134566777778888876643 2346677888887654
No 89
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.37 E-value=0.048 Score=55.98 Aligned_cols=95 Identities=18% Similarity=0.123 Sum_probs=60.0
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
+||+|.|+ |+||.++++.|+..|. ++++++.+.- +.. .+ ..+. ++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~-------------------~~~----~~--~~~~--~~~ 47 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH------EVLAVVRDPQ-------------------KAA----DR--LGAT--VAT 47 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HHH----HH--TCTT--SEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC------EEEEEEeccc-------------------ccc----cc--cCCC--ceE
Confidence 36999998 9999999999999987 8888875421 111 01 1123 444
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCC----------HHHHHHHHHHHHHcCCcEEEEeec
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDN----------VEARIYMDRRCVYSRKPLLESGTL 595 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn----------~~ar~~l~~~c~~~~~pli~~g~~ 595 (986)
+..++..... ..+.++|+||++... ...-..+-+.|.+.+..+|..++.
T Consensus 48 ~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 48 LVKEPLVLTE-----ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp EECCGGGCCH-----HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred EecccccccH-----hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 5555543221 567899999998743 333344555666666556666554
No 90
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.32 E-value=0.11 Score=53.94 Aligned_cols=100 Identities=13% Similarity=0.125 Sum_probs=60.9
Q ss_pred HHHhhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEE
Q psy7300 70 MRRMASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTK 148 (986)
Q Consensus 70 q~kL~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~ 148 (986)
+.+|++.+|+|.|+ |++|.++++.|+..|. ++++++.+.- +.+. +.+. .+ .+
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~-------------------~~~~----~~~~--~~-~~ 68 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEE-------------------QGPE----LRER--GA-SD 68 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGG-------------------GHHH----HHHT--TC-SE
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChH-------------------HHHH----HHhC--CC-ce
Confidence 55788999999996 9999999999999996 7888875321 1111 1111 22 02
Q ss_pred eecCCCC---HhhhccccEEEEecCC-------------HHHHHHHHHHHHHcCCc-EEEeeccc
Q psy7300 149 AYTGELS---EAFIKKFRVVVLTNST-------------YDEQLAISQITHANDIA-LIIADTRG 196 (986)
Q Consensus 149 ~~~~~~~---~~~l~~~dvVI~~~~~-------------~~~~~~i~~~c~~~~ip-~I~~~~~G 196 (986)
.+..+++ .+.+.+.|+||.+... ......+.+.|++.+++ +|..++.|
T Consensus 69 ~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 69 IVVANLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG 133 (236)
T ss_dssp EEECCTTSCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred EEEcccHHHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 2233332 3456789999987531 22234566788877754 77777655
No 91
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.24 E-value=0.15 Score=55.96 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=31.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
...+|.|||+|.+|..+|++|+..|...++++|.+.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 346899999999999999999999987899999753
No 92
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.24 E-value=0.046 Score=59.18 Aligned_cols=38 Identities=11% Similarity=0.191 Sum_probs=34.1
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.+.+++|+|+|+||+|..++..|+..|+ ++++|++.+.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~~ 151 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVR-----PTLTVANRTM 151 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCC-----SCCEEECSCG
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEeCCH
Confidence 3678999999999999999999999998 6899997664
No 93
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.23 E-value=0.058 Score=62.77 Aligned_cols=99 Identities=11% Similarity=0.143 Sum_probs=60.4
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
.+..++|+|+|+|++|..++..|+.. |+ +++++|.+. .|++.+++ . +.+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~------~V~v~~R~~-------------------~ka~~la~---~--~~~ 69 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDI------NVTVACRTL-------------------ANAQALAK---P--SGS 69 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTE------EEEEEESSH-------------------HHHHHHHG---G--GTC
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCC------eEEEEECCH-------------------HHHHHHHH---h--cCC
Confidence 45677899999999999999999988 44 789887542 23322221 1 122
Q ss_pred eEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEe
Q psy7300 538 NITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESG 593 (986)
Q Consensus 538 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g 593 (986)
.....++.+.. . + .+.+.++|+||+|+.... ...+...|...++.+++..
T Consensus 70 --~~~~~D~~d~~-~-l-~~~l~~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 70 --KAISLDVTDDS-A-L-DKVLADNDVVISLIPYTF-HPNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp --EEEECCTTCHH-H-H-HHHHHTSSEEEECSCGGG-HHHHHHHHHHHTCEEEECS
T ss_pred --cEEEEecCCHH-H-H-HHHHcCCCEEEECCchhh-hHHHHHHHHhcCCEEEEee
Confidence 22222332111 1 1 245678999999987542 2235677788888777753
No 94
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=94.22 E-value=0.16 Score=55.03 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=64.9
Q ss_pred HHHHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHh
Q psy7300 454 KNFQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKV 532 (986)
Q Consensus 454 ~~~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~ 532 (986)
......|.+++|+|.|+ ||||.++++.|+..|.+ .-++.++|.+. .+.+.+++.+..
T Consensus 25 ~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~---~~~V~~~~r~~-------------------~~~~~~~~~l~~ 82 (287)
T 3rku_A 25 RKAAERLAKKTVLITGASAGIGKATALEYLEASNG---DMKLILAARRL-------------------EKLEELKKTIDQ 82 (287)
T ss_dssp HHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTT---CSEEEEEESCH-------------------HHHHHHHHHHHH
T ss_pred ccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCC---CceEEEEECCH-------------------HHHHHHHHHHHh
Confidence 34457899999999996 89999999999998861 01777776432 355667777777
Q ss_pred hCCCceEEEEEcccCCcccc--ccc--cccccCCCEEEEcC
Q psy7300 533 MNPNVNITYHENRVGPETEK--VYD--DLFFESLDGIANAL 569 (986)
Q Consensus 533 ~np~~~i~~~~~~v~~~~~~--~~~--~~f~~~~DvVi~a~ 569 (986)
.+|..++..+..++.....- .+. .+-+...|+||++.
T Consensus 83 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA 123 (287)
T 3rku_A 83 EFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNA 123 (287)
T ss_dssp HCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECC
T ss_pred hCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 78888888888887643210 110 12234678888763
No 95
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=94.21 E-value=0.073 Score=56.79 Aligned_cols=83 Identities=18% Similarity=0.255 Sum_probs=57.2
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
|.+++++|.|+ ||||.++++.|+..|. ++.++|.+. .+.+.+.+.+...+|...
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~ 62 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA------NVLINGRRE-------------------ENVNETIKEIRAQYPDAI 62 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHHCTTCE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhCCCce
Confidence 56788999986 8999999999999998 888887542 345566677777788778
Q ss_pred EEEEEcccCCccc--cccccccccCCCEEEEcC
Q psy7300 539 ITYHENRVGPETE--KVYDDLFFESLDGIANAL 569 (986)
Q Consensus 539 i~~~~~~v~~~~~--~~~~~~f~~~~DvVi~a~ 569 (986)
+..+..++..... .. .+-+...|++|++.
T Consensus 63 ~~~~~~D~~~~~~~~~~--~~~~g~id~lv~nA 93 (267)
T 3t4x_A 63 LQPVVADLGTEQGCQDV--IEKYPKVDILINNL 93 (267)
T ss_dssp EEEEECCTTSHHHHHHH--HHHCCCCSEEEECC
T ss_pred EEEEecCCCCHHHHHHH--HHhcCCCCEEEECC
Confidence 8777776653221 01 01234566666653
No 96
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.15 E-value=0.14 Score=52.81 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=29.4
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
++...+|.|+|+|.+|+.+++.|+..|. +++++|.+
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~------~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGH------EVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTC------EEEEECTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 5677899999999999999999999987 89998754
No 97
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.14 E-value=0.068 Score=57.82 Aligned_cols=109 Identities=13% Similarity=0.098 Sum_probs=68.8
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
.+++++|+|+|+||.|..++..|...|++++++++.+.-....+...+ +..-.+...+.+. ..++-|++..
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~-------~~~~~~~~~~~~~--~aDiVInaTp 184 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI-------NKINLSHAESHLD--EFDIIINTTP 184 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC-------EEECHHHHHHTGG--GCSEEEECCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc-------ccccHhhHHHHhc--CCCEEEECcc
Confidence 367899999999999999999999999999999998764444443321 1000111111122 2344444432
Q ss_pred C--------CCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEE
Q psy7300 152 G--------ELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALI 190 (986)
Q Consensus 152 ~--------~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I 190 (986)
. .++.+.++.-.+|++...++. ...+.+.+++.|++.+
T Consensus 185 ~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~-~T~ll~~A~~~G~~~~ 230 (277)
T 3don_A 185 AGMNGNTDSVISLNRLASHTLVSDIVYNPY-KTPILIEAEQRGNPIY 230 (277)
T ss_dssp -------CCSSCCTTCCSSCEEEESCCSSS-SCHHHHHHHHTTCCEE
T ss_pred CCCCCCCcCCCCHHHcCCCCEEEEecCCCC-CCHHHHHHHHCcCEEe
Confidence 1 123345666678888876643 2356788889988754
No 98
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.09 E-value=0.051 Score=58.83 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=30.1
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
++|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~------~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF------AVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEeCCH
Confidence 689999999999999999999998 899998654
No 99
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=94.08 E-value=0.11 Score=57.02 Aligned_cols=112 Identities=16% Similarity=0.145 Sum_probs=64.5
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+..++|+|.|+ |.||..+++.|+..|-. -+++.+|...... +.. .+..+...-+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~----~~v~~~~~~~~~~-~~~--------------------~l~~~~~~~~ 76 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYET----YKIINFDALTYSG-NLN--------------------NVKSIQDHPN 76 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTT----EEEEEEECCCTTC-CGG--------------------GGTTTTTCTT
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCC----cEEEEEecccccc-chh--------------------hhhhhccCCC
Confidence 56678999998 99999999999999831 1666666433111 000 0111111223
Q ss_pred EEEEEcccCCccccccccccccC--CCEEEEcCCC-----------------HHHHHHHHHHHHHcCCc-EEEEeecCCc
Q psy7300 539 ITYHENRVGPETEKVYDDLFFES--LDGIANALDN-----------------VEARIYMDRRCVYSRKP-LLESGTLGTK 598 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~--~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~p-li~~g~~G~~ 598 (986)
++.+..++..... + ...+++ +|+||.+... +.+-..+-+.|...+++ +|..++.+.+
T Consensus 77 ~~~~~~Dl~d~~~--~-~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy 153 (346)
T 4egb_A 77 YYFVKGEIQNGEL--L-EHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVY 153 (346)
T ss_dssp EEEEECCTTCHHH--H-HHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGG
T ss_pred eEEEEcCCCCHHH--H-HHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHh
Confidence 5555555543211 1 234444 8888876532 12224566778888877 8888877655
Q ss_pred c
Q psy7300 599 G 599 (986)
Q Consensus 599 G 599 (986)
|
T Consensus 154 ~ 154 (346)
T 4egb_A 154 G 154 (346)
T ss_dssp C
T ss_pred C
Confidence 5
No 100
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.05 E-value=0.39 Score=51.11 Aligned_cols=97 Identities=10% Similarity=-0.011 Sum_probs=63.4
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
.++|+|.|+|.||+.+++.|...|. +++.++.+. .+... +.. + .++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~----~~~--~--~~~~ 51 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW------RIIGTSRNP-------------------DQMEA----IRA--S--GAEP 51 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC------EEEEEESCG-------------------GGHHH----HHH--T--TEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC------EEEEEEcCh-------------------hhhhh----Hhh--C--CCeE
Confidence 4789999999999999999999987 888886432 12211 111 2 3555
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCC----HHHHHHHHHHHHH--cC-CcEEEEeecCCcc
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDN----VEARIYMDRRCVY--SR-KPLLESGTLGTKG 599 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn----~~ar~~l~~~c~~--~~-~pli~~g~~G~~G 599 (986)
+..++.+ + + +.++|+||.+... ......+-+.|.. .+ ..+|..++.+.+|
T Consensus 52 ~~~D~~d-----~--~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 52 LLWPGEE-----P--S-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp EESSSSC-----C--C-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred EEecccc-----c--c-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 6555542 1 2 7899999998632 1223445556666 44 3588888777655
No 101
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.00 E-value=0.18 Score=58.32 Aligned_cols=94 Identities=16% Similarity=0.160 Sum_probs=62.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CC--CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILS-GV--KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~-GV--g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
..+|+|||+||+|+.+|..|++. ++ ..|+++|.+.. ++.. .+.+ .+++....
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~----------------~~~~----~~~~-----g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT----------------KVDV----AQQY-----GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC----------------SCCH----HHHH-----TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh----------------hhhH----Hhhc-----CCceeEEe
Confidence 57899999999999999999986 45 58999986543 2111 1222 23333322
Q ss_pred ---CCC---CHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeec
Q psy7300 152 ---GEL---SEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADT 194 (986)
Q Consensus 152 ---~~~---~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~ 194 (986)
++. -..++++.|+||.+.... .-..+-+.|.+.|+-+|.+..
T Consensus 68 Vdadnv~~~l~aLl~~~DvVIN~s~~~-~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 68 ITPQNYLEVIGSTLEENDFLIDVSIGI-SSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp CCTTTHHHHTGGGCCTTCEEEECCSSS-CHHHHHHHHHHHTCEEEESSC
T ss_pred ccchhHHHHHHHHhcCCCEEEECCccc-cCHHHHHHHHHcCCCEEECCC
Confidence 111 123555669999866443 345778999999998887764
No 102
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=93.87 E-value=0.32 Score=53.37 Aligned_cols=106 Identities=17% Similarity=0.175 Sum_probs=63.5
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN 536 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~ 536 (986)
..+..++|+|.|+ |.||..+++.|+..|. +++++|...-.. .+.. ......
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~---~~~~-------------------~~~~~~ 74 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH------EVTVVDNFFTGR---KRNV-------------------EHWIGH 74 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSCC---GGGT-------------------GGGTTC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC------EEEEEeCCCccc---hhhh-------------------hhhccC
Confidence 4567789999998 9999999999999987 888887532110 0000 001011
Q ss_pred ceEEEEEcccCCccccccccccccCCCEEEEcCCC---------H--------HHHHHHHHHHHHcCCcEEEEeecCCcc
Q psy7300 537 VNITYHENRVGPETEKVYDDLFFESLDGIANALDN---------V--------EARIYMDRRCVYSRKPLLESGTLGTKG 599 (986)
Q Consensus 537 ~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn---------~--------~ar~~l~~~c~~~~~pli~~g~~G~~G 599 (986)
.+++.+..++.. ..+.++|+||.+... . .+-..+-+.|...++.+|..++.+.+|
T Consensus 75 ~~~~~~~~D~~~--------~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g 146 (343)
T 2b69_A 75 ENFELINHDVVE--------PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG 146 (343)
T ss_dssp TTEEEEECCTTS--------CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred CceEEEeCccCC--------hhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhC
Confidence 234444444431 235689999987532 1 112345567777777888888776555
No 103
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=93.82 E-value=0.12 Score=55.61 Aligned_cols=67 Identities=13% Similarity=0.218 Sum_probs=49.9
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
..++|+|+|+||.|..++..|...|+++|+|++.+. .||+.+++.+.. .+. ..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~-------------------~ka~~la~~~~~-----~~~---~~ 170 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV-------------------KTGQYLAALYGY-----AYI---NS 170 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH-------------------HHHHHHHHHHTC-----EEE---SC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHcCC-----ccc---hh
Confidence 357899999999999999999999999999998532 377777666531 211 11
Q ss_pred CCHhhhccccEEEEecC
Q psy7300 154 LSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 154 ~~~~~l~~~dvVI~~~~ 170 (986)
+. +..+|+||.|+.
T Consensus 171 ~~---~~~~DivInaTp 184 (271)
T 1npy_A 171 LE---NQQADILVNVTS 184 (271)
T ss_dssp CT---TCCCSEEEECSS
T ss_pred hh---cccCCEEEECCC
Confidence 11 357899998885
No 104
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.82 E-value=0.25 Score=49.60 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=60.2
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 75 SSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 75 ~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
..+|+|.|+ |++|.++++.|+..| .++++++.+.-....+ ..+.+ +....+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~-------------------------~~~~~--~~~~~D 54 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPSE-------------------------GPRPA--HVVVGD 54 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSCSS-------------------------SCCCS--EEEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhcccc-------------------------cCCce--EEEEec
Confidence 468999997 999999999999999 4888888654221110 01122 222233
Q ss_pred CC-H----hhhccccEEEEecCC----------HHHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 154 LS-E----AFIKKFRVVVLTNST----------YDEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 154 ~~-~----~~l~~~dvVI~~~~~----------~~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
+. . +.++++|+||.+... ......+.+.|++.++ .+|..++.+.+|
T Consensus 55 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~ 116 (206)
T 1hdo_A 55 VLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116 (206)
T ss_dssp TTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred CCCHHHHHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeecc
Confidence 31 1 345667888876532 1234466677887776 477777766543
No 105
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.79 E-value=0.13 Score=56.92 Aligned_cols=75 Identities=19% Similarity=0.241 Sum_probs=53.6
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC----CCCEEE
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN----PYVSTK 148 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN----p~V~v~ 148 (986)
|...+|.|+|+|.+|+.+|..|+..|+++++|+|-+. .|++..+..|++.. ..+++.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 5567999999999999999999999988999999643 13333334454432 245555
Q ss_pred eecCCCCHhhhccccEEEEec
Q psy7300 149 AYTGELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 149 ~~~~~~~~~~l~~~dvVI~~~ 169 (986)
... +.+-+++.|+||.+.
T Consensus 64 ~t~---d~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 64 GTN---DYKDLENSDVVIVTA 81 (321)
T ss_dssp EES---CGGGGTTCSEEEECC
T ss_pred EcC---CHHHHCCCCEEEEcC
Confidence 432 245678999999985
No 106
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.79 E-value=0.17 Score=52.10 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=29.3
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
++...+|.|+|+|.+|+.+|+.|...|. +++++|.+
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4667799999999999999999999996 78898854
No 107
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.76 E-value=0.21 Score=54.05 Aligned_cols=98 Identities=14% Similarity=0.199 Sum_probs=64.2
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
.++|+|.|+ |.||+.+++.|+..|. ++++++.+. ....+. .++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~-~~~~~~-----------------------------~~~ 45 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN------TPIILTRSI-GNKAIN-----------------------------DYE 45 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCC-C----------------------------------CCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC------EEEEEeCCC-CcccCC-----------------------------ceE
Confidence 368999995 8999999999999987 888887651 000000 234
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCC-------------CHHHHHHHHHHHHHcCCc-EEEEeecCCcc
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALD-------------NVEARIYMDRRCVYSRKP-LLESGTLGTKG 599 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-------------n~~ar~~l~~~c~~~~~p-li~~g~~G~~G 599 (986)
.+..++. . +.. .+.++++|+||++.. |...-..+-+.|.+.+++ +|..++.+.+|
T Consensus 46 ~~~~Dl~-~-~~~--~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 46 YRVSDYT-L-EDL--INQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp EEECCCC-H-HHH--HHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred EEEcccc-H-HHH--HHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 4444443 1 111 345668888887653 234445677788888877 88888766555
No 108
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.74 E-value=0.2 Score=55.65 Aligned_cols=118 Identities=14% Similarity=0.151 Sum_probs=69.7
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHH--cCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAM--MGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN 536 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~--~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~ 536 (986)
+.+++|+|.|+ |+||.++++.|+. .|. +++++|...-+.. ..+. ..+.+++.. .. +.
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~------~V~~~~r~~~~~~-~~~~---~~~~~~~~~---------~~-~~ 67 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA------KVVVLDKFRSNTL-FSNN---RPSSLGHFK---------NL-IG 67 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS------EEEEEECCCCC-----------CCCCCCGG---------GG-TT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC------eEEEEECCCcccc-cccc---chhhhhhhh---------hc-cc
Confidence 56789999986 9999999999999 777 8999986432000 0000 001111111 01 12
Q ss_pred ceEEEEEcccCCcccccccccc-ccCCCEEEEcCC---------------CHHHHHHHHHHHHHcCCcEEEEeecCCcce
Q psy7300 537 VNITYHENRVGPETEKVYDDLF-FESLDGIANALD---------------NVEARIYMDRRCVYSRKPLLESGTLGTKGN 600 (986)
Q Consensus 537 ~~i~~~~~~v~~~~~~~~~~~f-~~~~DvVi~a~D---------------n~~ar~~l~~~c~~~~~pli~~g~~G~~G~ 600 (986)
..+..+..++.... .+ ..+ ..++|+||++.. |+.+-..+-+.|...+..+|..++.+.+|.
T Consensus 68 ~~~~~~~~Dl~d~~--~~-~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~ 144 (362)
T 3sxp_A 68 FKGEVIAADINNPL--DL-RRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGN 144 (362)
T ss_dssp CCSEEEECCTTCHH--HH-HHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCS
T ss_pred cCceEEECCCCCHH--HH-HHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCC
Confidence 23455556665321 11 223 678999998753 122334566778888888999988766654
No 109
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.71 E-value=0.14 Score=55.09 Aligned_cols=70 Identities=23% Similarity=0.327 Sum_probs=49.5
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
++.++|+|+|+|++|..+++.|...|+ +++++|.+. .|++.+++.+ .+....
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~~-------------------~~~~~l~~~~-------g~~~~~- 178 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRTK-------------------EKAIKLAQKF-------PLEVVN- 178 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSH-------------------HHHHHHTTTS-------CEEECS-
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECCH-------------------HHHHHHHHHc-------CCeeeh-
Confidence 567899999999999999999999999 999998532 2333322221 122222
Q ss_pred CCCHhhhccccEEEEecCC
Q psy7300 153 ELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~ 171 (986)
++ .+.++++|+||.|+..
T Consensus 179 ~~-~~~~~~aDiVi~atp~ 196 (275)
T 2hk9_A 179 SP-EEVIDKVQVIVNTTSV 196 (275)
T ss_dssp CG-GGTGGGCSEEEECSST
T ss_pred hH-HhhhcCCCEEEEeCCC
Confidence 22 3566789999999854
No 110
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.70 E-value=0.17 Score=55.82 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=69.0
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhh-CCCc
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVM-NPNV 537 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~-np~~ 537 (986)
+..++|+|.|+ |.||+.+++.|+..|. +++++|...-. ...+...+.+.+... .+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~-- 81 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ------KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWS-- 81 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHT--
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCCcc---------------chhhHHHHhhhcccccCC--
Confidence 67789999998 9999999999999987 88888753210 001111111111110 12
Q ss_pred eEEEEEcccCCccccccccccccCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCc-EEEEeecCCcc
Q psy7300 538 NITYHENRVGPETEKVYDDLFFESLDGIANALDN-----------------VEARIYMDRRCVYSRKP-LLESGTLGTKG 599 (986)
Q Consensus 538 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~p-li~~g~~G~~G 599 (986)
+++.+..++.+.. . + ...++++|+||++... ..+-..+-+.|...+++ +|..++.+.+|
T Consensus 82 ~~~~~~~Dl~d~~-~-~-~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 82 NFKFIQGDIRNLD-D-C-NNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp TEEEEECCTTSHH-H-H-HHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred ceEEEECCCCCHH-H-H-HHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 4556666665321 1 1 3567799999987642 11223455677777764 77777765544
No 111
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.67 E-value=0.18 Score=54.46 Aligned_cols=95 Identities=15% Similarity=0.196 Sum_probs=58.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCC--CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGV--KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GV--g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
...+|.|||+|.+|..+++.|...|. ..++++|.+. .+++.+.+.+ .+. ...
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------------------~~~~~l~~~~-----gi~--~~~ 55 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------------------DKLDFFKEKC-----GVH--TTQ 55 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------------------HHHHHHHHTT-----CCE--EES
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------------------HHHHHHHHHc-----CCE--EeC
Confidence 45789999999999999999999996 3688888532 1333332221 222 211
Q ss_pred CCCCHhhhccccEEEEecCCHHHHHHHHHHHHH--cCCcEEEeeccc
Q psy7300 152 GELSEAFIKKFRVVVLTNSTYDEQLAISQITHA--NDIALIIADTRG 196 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~--~~ip~I~~~~~G 196 (986)
-..+.+++.|+||.|..+......+.++... ..-.+|.+.+.|
T Consensus 56 --~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~~~iiiS~~ag 100 (280)
T 3tri_A 56 --DNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVG 100 (280)
T ss_dssp --CHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEEECCTT
T ss_pred --ChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEEEecCC
Confidence 1246678999999999654444444444322 122244444455
No 112
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.67 E-value=0.37 Score=52.93 Aligned_cols=108 Identities=14% Similarity=0.164 Sum_probs=67.9
Q ss_pred HhhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCC---CEE
Q psy7300 72 RMASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPY---VST 147 (986)
Q Consensus 72 kL~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~---V~v 147 (986)
.+...+|||.| .|.+|+.+++.|...|. +++.++...-. .. .....+..+.+. -.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~----------------~~---~~~~~~~~~~~~~~~~~~ 81 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG----------------HQ---YNLDEVKTLVSTEQWSRF 81 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC----------------CH---HHHHHHHHTSCHHHHTTE
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC----------------ch---hhhhhhhhccccccCCce
Confidence 56788999999 58899999999999995 78888753311 00 111222222110 234
Q ss_pred EeecCCCC-H----hhhccccEEEEecCC--H---------------HHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 148 KAYTGELS-E----AFIKKFRVVVLTNST--Y---------------DEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 148 ~~~~~~~~-~----~~l~~~dvVI~~~~~--~---------------~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
+.+..++. . +.++++|+||.+... . .....+.+.|++.++ .||++++.+.+|
T Consensus 82 ~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 82 CFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp EEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred EEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 44445552 2 356789999987642 1 112346678888887 688888877665
No 113
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=93.63 E-value=0.18 Score=58.43 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=30.0
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..++|+|+|+|++|..+++.|+..|. +++++|.+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~------~V~v~~R~ 35 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI------KVTVACRT 35 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC------EEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEECC
Confidence 35789999999999999999998886 79998865
No 114
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=93.61 E-value=0.27 Score=54.07 Aligned_cols=105 Identities=16% Similarity=0.223 Sum_probs=64.1
Q ss_pred HhhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee
Q psy7300 72 RMASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY 150 (986)
Q Consensus 72 kL~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~ 150 (986)
.+...+|||.|+ |.+|+++++.|+..|. +++++|...-... . .+..+.....++..
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------~------------~~~~~~~~~~~~~~ 80 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRK----------R------------NVEHWIGHENFELI 80 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG----------G------------GTGGGTTCTTEEEE
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccch----------h------------hhhhhccCCceEEE
Confidence 345678999996 8999999999999995 7888875321100 0 01111111124444
Q ss_pred cCCCCHhhhccccEEEEecCC---------HHH--------HHHHHHHHHHcCCcEEEeecccceE
Q psy7300 151 TGELSEAFIKKFRVVVLTNST---------YDE--------QLAISQITHANDIALIIADTRGLFA 199 (986)
Q Consensus 151 ~~~~~~~~l~~~dvVI~~~~~---------~~~--------~~~i~~~c~~~~ip~I~~~~~G~~G 199 (986)
..++.+..+.++|+||.+... ... ...+.+.|++.++.+|++++.+.+|
T Consensus 81 ~~D~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g 146 (343)
T 2b69_A 81 NHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG 146 (343)
T ss_dssp ECCTTSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred eCccCChhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhC
Confidence 445544456788999976531 111 2345567888788899888877665
No 115
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=93.61 E-value=0.24 Score=53.46 Aligned_cols=99 Identities=18% Similarity=0.267 Sum_probs=61.7
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
++|+|.|+ |.||..+++.|+..|. +++++|...-... .. ..+. ++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~----~~---------------------~~~~--~~~ 47 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY------EVVVVDNLSSGRR----EF---------------------VNPS--AEL 47 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCCSSCCG----GG---------------------SCTT--SEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCCCCCch----hh---------------------cCCC--ceE
Confidence 47999998 8999999999999987 8888875321100 00 0122 334
Q ss_pred EEcccCCccccccccccccCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALD-----------------NVEARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-----------------n~~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
+..++.+.. + ...++. |+||++.. |+.+-..+-+.|.+.++ .+|..++.+.+|
T Consensus 48 ~~~Dl~d~~---~-~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg 118 (312)
T 3ko8_A 48 HVRDLKDYS---W-GAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG 118 (312)
T ss_dssp ECCCTTSTT---T-TTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred EECccccHH---H-HhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhC
Confidence 444444321 1 334455 99998754 23333456677777776 588887766554
No 116
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=93.55 E-value=0.17 Score=53.89 Aligned_cols=65 Identities=12% Similarity=0.211 Sum_probs=46.1
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.+. .+.+.+.+.+.+..|..
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 64 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA------KLSLVDVSS-------------------EGLEASKAAVLETAPDA 64 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCTTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhcCCc
Confidence 367788999986 8999999999999997 888887542 23344455555555555
Q ss_pred eEEEEEcccCC
Q psy7300 538 NITYHENRVGP 548 (986)
Q Consensus 538 ~i~~~~~~v~~ 548 (986)
++..+..++.+
T Consensus 65 ~~~~~~~D~~~ 75 (267)
T 1iy8_A 65 EVLTTVADVSD 75 (267)
T ss_dssp CEEEEECCTTS
T ss_pred eEEEEEccCCC
Confidence 66666666653
No 117
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.54 E-value=0.23 Score=50.85 Aligned_cols=100 Identities=10% Similarity=0.088 Sum_probs=61.5
Q ss_pred CcEEEEec-ChhhHHHHHHHH-HcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFA-MMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa-~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
++|+|.|+ |+||.++++.|+ ..|. ++++++.+.-+ .+ + .+....+ ++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~------~V~~~~r~~~~--~~----------------~----~~~~~~~--~~~ 55 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM------HITLYGRQLKT--RI----------------P----PEIIDHE--RVT 55 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC------EEEEEESSHHH--HS----------------C----HHHHTST--TEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc------eEEEEecCccc--cc----------------h----hhccCCC--ceE
Confidence 35999995 999999999999 8998 89888764210 00 0 0111223 455
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCC--CHHHHHHHHHHHHHcCC-cEEEEeecC
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALD--NVEARIYMDRRCVYSRK-PLLESGTLG 596 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D--n~~ar~~l~~~c~~~~~-pli~~g~~G 596 (986)
.+..++.+... + ...++++|+||++.. |+.+ +.+-+.|.+.+. .+|..++.+
T Consensus 56 ~~~~D~~d~~~-~--~~~~~~~d~vv~~ag~~n~~~-~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 56 VIEGSFQNPGX-L--EQAVTNAEVVFVGAMESGSDM-ASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp EEECCTTCHHH-H--HHHHTTCSEEEESCCCCHHHH-HHHHHHHHHTTCCEEEEEEETT
T ss_pred EEECCCCCHHH-H--HHHHcCCCEEEEcCCCCChhH-HHHHHHHHhcCCCeEEEEeece
Confidence 66666653221 1 356789999999875 3443 344445566664 366555544
No 118
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.52 E-value=0.42 Score=48.95 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=62.4
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 76 SDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 76 s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
.+|+|.| .|++|.++++.|...| .++++++...-....+ .+ .++.+..++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~--------------------------~~--~~~~~~~Dl 55 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKIE--------------------------NE--HLKVKKADV 55 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCCC--------------------------CT--TEEEECCCT
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchhc--------------------------cC--ceEEEEecC
Confidence 5899999 5889999999999999 4899888754322221 11 233333343
Q ss_pred C-----HhhhccccEEEEecCC-----------HHHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 155 S-----EAFIKKFRVVVLTNST-----------YDEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 155 ~-----~~~l~~~dvVI~~~~~-----------~~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
. .+.++++|+||.+... ......+.+.|++.++ .||..++.+.++
T Consensus 56 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 117 (227)
T 3dhn_A 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLF 117 (227)
T ss_dssp TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSE
T ss_pred CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhcc
Confidence 2 1345677888876532 2334567788888887 588877776443
No 119
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.48 E-value=0.099 Score=56.53 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=58.6
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
...+|.|||+|.+|+.+++.|+..|+. ..+++++|.+. .|++.+++. + .+.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~---~~~V~v~dr~~-------------------~~~~~l~~~---~--gi~-- 52 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYD---PNRICVTNRSL-------------------DKLDFFKEK---C--GVH-- 52 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCC---GGGEEEECSSS-------------------HHHHHHHHT---T--CCE--
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCC---CCeEEEEeCCH-------------------HHHHHHHHH---c--CCE--
Confidence 357899999999999999999999862 14788887543 122222211 1 122
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHH--cCCcEEEEeecCC
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVY--SRKPLLESGTLGT 597 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~--~~~pli~~g~~G~ 597 (986)
.. .+ +.+.+.+.|+||.|+.....+..+.++... .+..+|-+-+.|.
T Consensus 53 ~~-----~~-----~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi 101 (280)
T 3tri_A 53 TT-----QD-----NRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVGV 101 (280)
T ss_dssp EE-----SC-----HHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTC
T ss_pred Ee-----CC-----hHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEEEecCCC
Confidence 11 11 134568899999999655555555555432 2333444433443
No 120
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.46 E-value=0.14 Score=54.80 Aligned_cols=94 Identities=18% Similarity=0.305 Sum_probs=61.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
+..+|||.|+|.+|+.+++.|...|. +++.++...-. + .+.+++ +..+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~--------------------------~~~~~~--~~~D 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQP---M--------------------------PAGVQT--LIAD 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSC---C--------------------------CTTCCE--EECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCccc---c--------------------------ccCCce--EEcc
Confidence 45689999999999999999999997 68887754211 1 122222 2222
Q ss_pred C-C----Hhhhcc-ccEEEEecC------------CHHHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 154 L-S----EAFIKK-FRVVVLTNS------------TYDEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 154 ~-~----~~~l~~-~dvVI~~~~------------~~~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
+ + .+.+++ +|+||.+.. +......+.+.|++.++ .||++++.+.||
T Consensus 50 l~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 50 VTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp TTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred CCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 2 1 123444 888887642 23345567778887775 488888888776
No 121
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.43 E-value=0.16 Score=52.89 Aligned_cols=92 Identities=20% Similarity=0.165 Sum_probs=62.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
.+.+|+|+|+|.+|..+++.|...|. ++++|.+. .++ +.+. +.+. ++..+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~-------------------~~~----~~~~---~~~~--~i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRK----KVLR---SGAN--FVHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGG-------------------GHH----HHHH---TTCE--EEESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCH-------------------HHH----HHHh---cCCe--EEEcC
Confidence 35689999999999999999999987 89998642 122 2222 2333 33333
Q ss_pred C-CHhh-----hccccEEEEecCCHHHHHHHHHHHHHcCCc-EEEeecc
Q psy7300 154 L-SEAF-----IKKFRVVVLTNSTYDEQLAISQITHANDIA-LIIADTR 195 (986)
Q Consensus 154 ~-~~~~-----l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip-~I~~~~~ 195 (986)
. +++. ++++|+||.++.+.+....+...+++.+.. .|.+.+.
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 3 3332 568899999998877777778888888764 5555443
No 122
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.43 E-value=0.13 Score=55.43 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=31.5
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~------~V~v~~r~ 161 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA------KVFLWNRT 161 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC------EEEEEECC
Confidence 677899999999999999999999987 89998754
No 123
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.41 E-value=0.14 Score=54.63 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=32.7
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
+++ +|+|+|+||.|..++..|...|+++|++++.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 456 999999999999999999999999999998643
No 124
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.39 E-value=0.17 Score=55.88 Aligned_cols=37 Identities=22% Similarity=0.438 Sum_probs=31.4
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+++..||.|+|+|.+|+.++..|+..|+ ++++++|-+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~-----~~v~L~Di~ 40 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKEL-----GDVVLFDIA 40 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 3567899999999999999999999988 489999854
No 125
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.38 E-value=0.22 Score=54.87 Aligned_cols=78 Identities=18% Similarity=0.272 Sum_probs=52.5
Q ss_pred HHHhhcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHh----hcCCC
Q psy7300 70 MRRMASSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLS----QLNPY 144 (986)
Q Consensus 70 q~kL~~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~----~lNp~ 144 (986)
|+++...+|.|+|+|.+|..++..|+..|. .++.|+|-+. .|++..+..|. .++..
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~ 61 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT-------------------EKVRGDVMDLKHATPYSPTT 61 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH-------------------HHHHHHHHHHHHHGGGSSSC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHhhhhhhhHHhhhhhcCCC
Confidence 345677899999999999999999999886 7899999531 13332222222 22245
Q ss_pred CEEEeecCCCCHhhhccccEEEEecC
Q psy7300 145 VSTKAYTGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 145 V~v~~~~~~~~~~~l~~~dvVI~~~~ 170 (986)
+++.. + +.+-+++.|+||.+..
T Consensus 62 ~~v~~--~--~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 62 VRVKA--G--EYSDCHDADLVVICAG 83 (317)
T ss_dssp CEEEE--C--CGGGGTTCSEEEECCC
T ss_pred eEEEe--C--CHHHhCCCCEEEECCC
Confidence 56665 2 2455889999999864
No 126
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=93.38 E-value=0.21 Score=53.44 Aligned_cols=64 Identities=14% Similarity=0.155 Sum_probs=45.2
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
.|.+++|+|.|+ ||||.++++.|+..|. +++++|.+. .+.+.+++.++...+..
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 83 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL------KVVGCARTV-------------------GNIEELAAECKSAGYPG 83 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTCSS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEECCh-------------------HHHHHHHHHHHhcCCCc
Confidence 578889999986 8999999999999997 888887542 23344455555554444
Q ss_pred eEEEEEcccC
Q psy7300 538 NITYHENRVG 547 (986)
Q Consensus 538 ~i~~~~~~v~ 547 (986)
++..+..++.
T Consensus 84 ~~~~~~~Dl~ 93 (279)
T 1xg5_A 84 TLIPYRCDLS 93 (279)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEecCC
Confidence 5666665554
No 127
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.37 E-value=0.48 Score=49.04 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=50.9
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
.+.+++|+|.|+ |+||.++++.|+..|.. .+++++|.+.-. +.. .+ .+
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~----~~V~~~~r~~~~---~~~-----------~~-----------~~-- 63 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLF----SKVTLIGRRKLT---FDE-----------EA-----------YK-- 63 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCC----SEEEEEESSCCC---CCS-----------GG-----------GG--
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCC----CEEEEEEcCCCC---ccc-----------cc-----------cC--
Confidence 367789999995 99999999999998851 278888764311 110 00 01
Q ss_pred eEEEEEcccCCccccccccccccCCCEEEEcCCC
Q psy7300 538 NITYHENRVGPETEKVYDDLFFESLDGIANALDN 571 (986)
Q Consensus 538 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn 571 (986)
.+..+..++.+.. .+ ...++++|+||++...
T Consensus 64 ~~~~~~~D~~d~~-~~--~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 64 NVNQEVVDFEKLD-DY--ASAFQGHDVGFCCLGT 94 (242)
T ss_dssp GCEEEECCGGGGG-GG--GGGGSSCSEEEECCCC
T ss_pred CceEEecCcCCHH-HH--HHHhcCCCEEEECCCc
Confidence 2444555554321 11 4567899999998753
No 128
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.34 E-value=0.23 Score=54.53 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=27.8
Q ss_pred HHHHhhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 69 AMRRMASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 69 ~q~kL~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
.+..+...+|||.|+ |.+|+.+++.|+..|. +++++|...
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~ 53 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRP 53 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSC
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCC
Confidence 356778889999996 8999999999999995 688877643
No 129
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=93.29 E-value=0.16 Score=54.07 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=63.6
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
.++|+|.|+ |+||.++++.|+..|. +++++|.+..... ..+++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~------~V~~~~r~~~~~~------------------------------~~~~~ 46 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE------ILRLADLSPLDPA------------------------------GPNEE 46 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE------EEEEEESSCCCCC------------------------------CTTEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC------EEEEEecCCcccc------------------------------CCCCE
Confidence 467999995 8999999999999886 8888886542211 12455
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCC-------------CHHHHHHHHHHHHHcCC-cEEEEeecCCc
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALD-------------NVEARIYMDRRCVYSRK-PLLESGTLGTK 598 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-------------n~~ar~~l~~~c~~~~~-pli~~g~~G~~ 598 (986)
.+..++.+... + ..++++.|+||++.. |+.+-..+-+.|++.+. .+|..++....
T Consensus 47 ~~~~Dl~d~~~-~--~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~ 115 (267)
T 3rft_A 47 CVQCDLADANA-V--NAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTI 115 (267)
T ss_dssp EEECCTTCHHH-H--HHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred EEEcCCCCHHH-H--HHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHh
Confidence 66666653221 1 356678899988642 22223456677777765 57777665433
No 130
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.29 E-value=0.21 Score=55.53 Aligned_cols=106 Identities=21% Similarity=0.297 Sum_probs=64.4
Q ss_pred HHHHHhhcCcEEEEc-CChhHHHHHHHHHHh-CCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCC
Q psy7300 68 DAMRRMASSDVLISG-LGGLGVEIAKNVILS-GVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYV 145 (986)
Q Consensus 68 ~~q~kL~~s~VlIiG-~gglGseiaknLvl~-GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V 145 (986)
.++..|...+|||.| .|.+|+.+++.|... |. +++.+|...-....+ .. .+
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~-----------------------~~-~~-- 69 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDL-----------------------VK-HE-- 69 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGG-----------------------GG-ST--
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhh-----------------------cc-CC--
Confidence 446677788999999 689999999999998 65 788888643111110 00 12
Q ss_pred EEEeecCCCC--H----hhhccccEEEEecC--CHHH---------------HHHHHHHHHHcCCcEEEeecccceEE
Q psy7300 146 STKAYTGELS--E----AFIKKFRVVVLTNS--TYDE---------------QLAISQITHANDIALIIADTRGLFAQ 200 (986)
Q Consensus 146 ~v~~~~~~~~--~----~~l~~~dvVI~~~~--~~~~---------------~~~i~~~c~~~~ip~I~~~~~G~~G~ 200 (986)
.++.+..++. . +.++++|+||.+.. .... ...+.+.|++.+..||++++.+.||.
T Consensus 70 ~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 70 RMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGM 147 (372)
T ss_dssp TEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBS
T ss_pred CeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCC
Confidence 2334444443 2 24567899887543 1110 13466788887778999998887763
No 131
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=93.27 E-value=0.18 Score=53.58 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=47.7
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
|.++.++|.|+ ||||.++++.|+..|. ++.++|.+. .+.+.+.+.+....+..+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~ 60 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA------AVAFCARDG-------------------ERLRAAESALRQRFPGAR 60 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHSTTCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHHhcCCce
Confidence 56788999986 8999999999999998 898887542 345556666666666666
Q ss_pred EEEEEcccC
Q psy7300 539 ITYHENRVG 547 (986)
Q Consensus 539 i~~~~~~v~ 547 (986)
+..+..++.
T Consensus 61 ~~~~~~Dv~ 69 (265)
T 3lf2_A 61 LFASVCDVL 69 (265)
T ss_dssp EEEEECCTT
T ss_pred EEEEeCCCC
Confidence 767666665
No 132
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.25 E-value=0.12 Score=56.93 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=30.3
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
-++|.|||+|.+|+.++..|+..|. .++++|.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~------~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGF------RVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC------CEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCC------EEEEEeCCH
Confidence 4689999999999999999999998 899998664
No 133
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.23 E-value=0.28 Score=49.88 Aligned_cols=94 Identities=15% Similarity=0.081 Sum_probs=59.4
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
+||+|.|+ |+||.++++.|+..|. ++++++.+. .|. ..+.+.+ +.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~-------------------~~~-------~~~~~~~--~~ 46 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH------EVTAIVRNA-------------------GKI-------TQTHKDI--NI 46 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCS-------------------HHH-------HHHCSSS--EE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC------EEEEEEcCc-------------------hhh-------hhccCCC--eE
Confidence 37999996 9999999999999997 888887542 111 1122343 44
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCC--------HHHHHHHHHHHHHcC-CcEEEEeec
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDN--------VEARIYMDRRCVYSR-KPLLESGTL 595 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn--------~~ar~~l~~~c~~~~-~pli~~g~~ 595 (986)
+..++.+... +.+.++|+||++... ...-..+-+.|.+.+ ..+|..++.
T Consensus 47 ~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 47 LQKDIFDLTL-----SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp EECCGGGCCH-----HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred EeccccChhh-----hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 5555543221 567899999998643 233345556666664 345555544
No 134
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.17 E-value=0.1 Score=56.45 Aligned_cols=80 Identities=18% Similarity=0.161 Sum_probs=52.6
Q ss_pred HhcCcEEEEe-cChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVG-AGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvG-aGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+.+++++|.| +||+|..+++.|+..|. +++++|.+. .|++.+++.+... +.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~------~V~i~~R~~-------------------~~~~~l~~~~~~~-~~~~ 170 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA------EVVLCGRKL-------------------DKAQAAADSVNKR-FKVN 170 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHH-HTCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC------EEEEEECCH-------------------HHHHHHHHHHHhc-CCcE
Confidence 5678999999 89999999999999998 688887432 3455555555432 2233
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
+.. .++.+.. .. ...++.+|+||+++.
T Consensus 171 ~~~--~D~~~~~-~~--~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 171 VTA--AETADDA-SR--AEAVKGAHFVFTAGA 197 (287)
T ss_dssp CEE--EECCSHH-HH--HHHTTTCSEEEECCC
T ss_pred EEE--ecCCCHH-HH--HHHHHhCCEEEECCC
Confidence 322 2332211 11 345677899999974
No 135
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.15 E-value=0.1 Score=60.67 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=70.6
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
..++|+|+|.|-+|..+|+.|-. +. ++.|++.|. .|++.+++. .|++.
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~~------~v~iIE~d~-------------------~r~~~la~~----l~~~~-- 281 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-TY------SVKLIERNL-------------------QRAEKLSEE----LENTI-- 281 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-TS------EEEEEESCH-------------------HHHHHHHHH----CTTSE--
T ss_pred cccEEEEEcchHHHHHHHHHhhh-cC------ceEEEecCH-------------------HHHHHHHHH----CCCce--
Confidence 35789999999999999999853 33 899998765 344444433 35543
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEE
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLES 592 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~ 592 (986)
.++.+... .+.+.++=++++|+++.++++-+.-..+.-+++++|++-+-+
T Consensus 282 Vi~GD~td--~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 282 VFCGDAAD--QELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp EEESCTTC--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEeccccc--hhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 33343332 234455667899999999999999999999999988874443
No 136
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=93.06 E-value=0.24 Score=54.11 Aligned_cols=103 Identities=18% Similarity=0.320 Sum_probs=62.4
Q ss_pred CcEEEEec-ChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
++|+|.|+ |.||.++++.|+.. |. +++++|.+.- .+.+ . . ..-+++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~~~---~~~~-~-~---------------------~~~~~~ 48 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIGSD---AISR-F-L---------------------NHPHFH 48 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC------EEEEEESCCG---GGGG-G-T---------------------TCTTEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC------EEEEEeCCcc---hHHH-h-h---------------------cCCCeE
Confidence 47999998 99999999999987 66 8888876431 1110 0 0 011355
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCC--CH---------------HHHHHHHHHHHHcCCcEEEEeecCCcc
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALD--NV---------------EARIYMDRRCVYSRKPLLESGTLGTKG 599 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D--n~---------------~ar~~l~~~c~~~~~pli~~g~~G~~G 599 (986)
.+..++....+. + ...++++|+||.+.. .. .+-..+-+.|...+..+|..++.+.+|
T Consensus 49 ~~~~D~~~~~~~-~-~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g 122 (345)
T 2bll_A 49 FVEGDISIHSEW-I-EYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 122 (345)
T ss_dssp EEECCTTTCSHH-H-HHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred EEeccccCcHHH-H-HhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcC
Confidence 555555431111 1 235567899998643 11 112345566777777788887766554
No 137
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.04 E-value=0.3 Score=53.32 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=61.9
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
.+|+|.|+ |.||+.+++.|+..|. +++++|.+.-...++. . + .++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~l~-----------------------~--~--~~~~ 60 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH------DLVLIHRPSSQIQRLA-----------------------Y--L--EPEC 60 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECTTSCGGGGG-----------------------G--G--CCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------EEEEEecChHhhhhhc-----------------------c--C--CeEE
Confidence 48999996 9999999999999887 8999886532111110 0 1 2344
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDN---------------VEARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn---------------~~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
+..++.+.. .+ ...++++|+||.+... +.+-..+-+.|...++ .+|..++.+..|
T Consensus 61 ~~~Dl~d~~-~~--~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 61 RVAEMLDHA-GL--ERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMP 131 (342)
T ss_dssp EECCTTCHH-HH--HHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSC
T ss_pred EEecCCCHH-HH--HHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhC
Confidence 444554221 11 3456788988887532 2223456677777774 577777765544
No 138
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=93.04 E-value=0.31 Score=53.47 Aligned_cols=106 Identities=16% Similarity=0.209 Sum_probs=63.0
Q ss_pred hhcCcEEEEcC-ChhHHHHHHHHHHhCCC-eEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee
Q psy7300 73 MASSDVLISGL-GGLGVEIAKNVILSGVK-SVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY 150 (986)
Q Consensus 73 L~~s~VlIiG~-gglGseiaknLvl~GVg-~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~ 150 (986)
+...+|||.|+ |.+|+.+++.|+..|-. .++.+|....... . +.+..+...-.++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~--------------------~~l~~~~~~~~~~~~ 80 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-L--------------------NNVKSIQDHPNYYFV 80 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-G--------------------GGGTTTTTCTTEEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-h--------------------hhhhhhccCCCeEEE
Confidence 44568999996 89999999999999932 5666664331110 0 112222222234444
Q ss_pred cCCCC-H----hhhcc--ccEEEEecCCH-----------------HHHHHHHHHHHHcCCc-EEEeecccceE
Q psy7300 151 TGELS-E----AFIKK--FRVVVLTNSTY-----------------DEQLAISQITHANDIA-LIIADTRGLFA 199 (986)
Q Consensus 151 ~~~~~-~----~~l~~--~dvVI~~~~~~-----------------~~~~~i~~~c~~~~ip-~I~~~~~G~~G 199 (986)
..++. . +.+++ +|+||.+.... .....+.+.|++.+++ ||++++.+.||
T Consensus 81 ~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 81 KGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYG 154 (346)
T ss_dssp ECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhC
Confidence 44442 2 23444 88888764311 1124567788888887 88888877766
No 139
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.98 E-value=0.18 Score=57.66 Aligned_cols=91 Identities=12% Similarity=0.143 Sum_probs=62.5
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
+.+|+|+|+|-+|..+++.|...|+ .++++|.|.-. ++ .+++. + +..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~------~vvvId~d~~~-------------------v~----~~~~~--g--~~v 50 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV------KMVVLDHDPDH-------------------IE----TLRKF--G--MKV 50 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEECCHHH-------------------HH----HHHHT--T--CCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHHH-------------------HH----HHHhC--C--CeE
Confidence 4579999999999999999999998 89999987521 11 12222 1 122
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCC
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRK 587 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~ 587 (986)
+..+... .+.+...=+.++|+||.|+++.++-..+-..++..+.
T Consensus 51 i~GDat~--~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 51 FYGDATR--MDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp EESCTTC--HHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred EEcCCCC--HHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 3333221 1122122257899999999999988888888887764
No 140
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.97 E-value=0.1 Score=55.51 Aligned_cols=93 Identities=11% Similarity=0.082 Sum_probs=57.7
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
+...+|.|||+|.+|+.+++.|+..|. ..++++|.+. .+++.+++ .+. +.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~-----~~v~~~~~~~-------------------~~~~~~~~---~~g--~~- 57 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGF-----RIVQVYSRTE-------------------ESARELAQ---KVE--AE- 57 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSSH-------------------HHHHHHHH---HTT--CE-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-----eEEEEEeCCH-------------------HHHHHHHH---HcC--Cc-
Confidence 445789999999999999999999987 2378887432 12222222 111 22
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHH--cCCcEEEEe
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVY--SRKPLLESG 593 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~--~~~pli~~g 593 (986)
.. .. . .+.+.++|+|+.|+-....+..+..+... .+..+++..
T Consensus 58 -~~-~~----~-----~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 58 -YT-TD----L-----AEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -EE-SC----G-----GGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred -ee-CC----H-----HHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 11 01 0 24567899999999877665556554322 344566554
No 141
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.96 E-value=0.2 Score=54.63 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=32.6
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|+|+|++|..++..|+..|+ .+|+|+|.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~-----~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAA-----ERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCC-----CEEEEEeCC
Confidence 567899999999999999999999998 699998755
No 142
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.95 E-value=0.15 Score=54.04 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=31.8
Q ss_pred HHhcCcEEEEec-C-hhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-G-AIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-G-giG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ | |||.++++.|+..|. +++++|.+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCC------EEEEecCC
Confidence 467889999998 7 899999999999998 89998754
No 143
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.87 E-value=0.1 Score=56.10 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=59.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHh-------hc-CCCCE
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLS-------QL-NPYVS 146 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~-------~l-Np~V~ 146 (986)
.++|+|+|+||.|..++..|...| .++++++.+.- |++.++ .+. ++ ..++-
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~-------------------ka~~la-~~~~~~~~~~~l~~~DiV 176 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSR-------------------GLDFFQ-RLGCDCFMEPPKSAFDLI 176 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCT-------------------THHHHH-HHTCEEESSCCSSCCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHH-------------------HHHHHH-HCCCeEecHHHhccCCEE
Confidence 789999999999999999999999 99999987542 233222 111 11 23333
Q ss_pred EEeecC------CCCHh----hhccccEEEEecCCHHHHHHHHHHHHHcCCcEE
Q psy7300 147 TKAYTG------ELSEA----FIKKFRVVVLTNSTYDEQLAISQITHANDIALI 190 (986)
Q Consensus 147 v~~~~~------~~~~~----~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I 190 (986)
|++... .++.+ .+..-.+|++...++ ...+.+.+++.|++.+
T Consensus 177 InaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G~~~~ 228 (269)
T 3phh_A 177 INATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELKTPFQ 228 (269)
T ss_dssp EECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTTCCEE
T ss_pred EEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCcCEEE
Confidence 433221 23344 455556777777654 3446777788877654
No 144
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.86 E-value=0.16 Score=54.94 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=30.4
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.+..++|+|.|+ |.||+.+++.|+..|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE------EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC------EEEEEecCC
Confidence 356789999998 8999999999999987 888887654
No 145
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.80 E-value=0.46 Score=50.03 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=53.3
Q ss_pred HHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCC-ccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEe
Q psy7300 71 RRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATS-LSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKA 149 (986)
Q Consensus 71 ~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~-~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~ 149 (986)
.++...+|.|||+|.+|..+|++|+..|. .++++|.+.-. .... .....+..++ +.+.+..+.+....
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~ 83 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKATLARA------EPDAMGAPPF----SQWLPEHPHVHLAA 83 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHTCC-------------CCH----HHHGGGSTTCEEEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhhhhhhh------hhhhhcchhh----hHHHhhcCceeccC
Confidence 47889999999999999999999999996 79999865321 0000 0011111111 12222223222111
Q ss_pred ecCCCCHhhhccccEEEEecCCHHHHHHHHH
Q psy7300 150 YTGELSEAFIKKFRVVVLTNSTYDEQLAISQ 180 (986)
Q Consensus 150 ~~~~~~~~~l~~~dvVI~~~~~~~~~~~i~~ 180 (986)
..+.+++.|+||.|..+......+.+
T Consensus 84 -----~~e~~~~aDvVilavp~~~~~~~~~~ 109 (245)
T 3dtt_A 84 -----FADVAAGAELVVNATEGASSIAALTA 109 (245)
T ss_dssp -----HHHHHHHCSEEEECSCGGGHHHHHHH
T ss_pred -----HHHHHhcCCEEEEccCcHHHHHHHHH
Confidence 24567889999999976554444433
No 146
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.78 E-value=0.29 Score=54.08 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=55.0
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCC---CCEEE
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNP---YVSTK 148 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp---~V~v~ 148 (986)
-...+|.|+|+|.+|+.+|..|+..|+ ++++|+|.+ ..|++..+.-|+...| .+++.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~~i~ 67 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPKKIY 67 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCcEEE
Confidence 346789999999999999999999998 689999952 2356655556665544 34443
Q ss_pred eecCCCCHhhhccccEEEEecC
Q psy7300 149 AYTGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 149 ~~~~~~~~~~l~~~dvVI~~~~ 170 (986)
.. +.+-++++|+||.+..
T Consensus 68 --~~--~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 68 --SA--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --EC--CGGGGTTCSEEEECCC
T ss_pred --EC--cHHHhcCCCEEEECCC
Confidence 22 2455789999999864
No 147
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=92.78 E-value=0.36 Score=50.19 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=63.4
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHcC-CCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMMG-VGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~G-v~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
..++|+|.|+ |+||.++++.|+..| . ++++++.+.-....+ . + -.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~------~V~~~~R~~~~~~~~-----~---------------------~-~~ 68 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTI------KQTLFARQPAKIHKP-----Y---------------------P-TN 68 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTE------EEEEEESSGGGSCSS-----C---------------------C-TT
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCc------eEEEEEcChhhhccc-----c---------------------c-CC
Confidence 3468999995 999999999999988 5 888887653211110 0 0 13
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcCCCHHH---HHHHHHHHHHcCCc-EEEEeecCCcc
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANALDNVEA---RIYMDRRCVYSRKP-LLESGTLGTKG 599 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~a---r~~l~~~c~~~~~p-li~~g~~G~~G 599 (986)
++.+..++.+... + ...++++|+||++...... -..+-..|.+.+.. +|..++.+..+
T Consensus 69 ~~~~~~Dl~d~~~-~--~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 69 SQIIMGDVLNHAA-L--KQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYD 130 (236)
T ss_dssp EEEEECCTTCHHH-H--HHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred cEEEEecCCCHHH-H--HHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecC
Confidence 5566666653221 1 4567899999987654221 12445566666654 77776655443
No 148
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=92.77 E-value=0.16 Score=53.69 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=45.6
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC-
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN- 536 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~- 536 (986)
.+.+++++|.|+ ||||.++++.|+..|. ++.++|.+. .+.+.+++.+.+.++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 58 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY------RVVLIARSK-------------------QNLEKVHDEIMRSNKHV 58 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC------EEEEEESCH-------------------HHHHHHHHHHHHHCTTS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHHhcccc
Confidence 356788999996 8999999999999998 898887532 3455566666666554
Q ss_pred ceEEEEEcccC
Q psy7300 537 VNITYHENRVG 547 (986)
Q Consensus 537 ~~i~~~~~~v~ 547 (986)
.++..+..++.
T Consensus 59 ~~~~~~~~Dv~ 69 (250)
T 3nyw_A 59 QEPIVLPLDIT 69 (250)
T ss_dssp CCCEEEECCTT
T ss_pred CcceEEeccCC
Confidence 44555554443
No 149
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.75 E-value=0.39 Score=52.32 Aligned_cols=72 Identities=18% Similarity=0.248 Sum_probs=50.9
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh----cCCCCEEEeec
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ----LNPYVSTKAYT 151 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~----lNp~V~v~~~~ 151 (986)
||.|+|+|++|+.+|-.|+..|. +++.|+|-. +.|++..+--|+. ++...++....
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA-------------------EDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS-------------------HHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------CCcchhhhhhhhcccccCCCCCeEecCC
Confidence 79999999999999999999886 889999831 2344444444554 34445554432
Q ss_pred CCCCHhhhccccEEEEecC
Q psy7300 152 GELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~ 170 (986)
+.+-+++.|+||.+..
T Consensus 63 ---d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 63 ---DYSLLKGSEIIVVTAG 78 (294)
T ss_dssp ---CGGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEEecC
Confidence 2345789999998763
No 150
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=92.74 E-value=0.24 Score=54.16 Aligned_cols=108 Identities=18% Similarity=0.235 Sum_probs=64.0
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhh-CCCceE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVM-NPNVNI 539 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~-np~~~i 539 (986)
+++|+|.|+ |+||.++++.|+..|. +++++|.+.-. ...+.+.+... .+ .+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~------~V~~~~r~~~~-------------------~~~~~~~~~~~~~~--~~ 57 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY------DVVIADNLVNS-------------------KREAIARIEKITGK--TP 57 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCCSSS-------------------CTHHHHHHHHHHSC--CC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC------cEEEEecCCcc-------------------hHHHHHHHHhhcCC--Cc
Confidence 568999995 8999999999999997 88888743211 01112222222 23 34
Q ss_pred EEEEcccCCcccccccccccc--CCCEEEEcCC-----------------CHHHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 540 TYHENRVGPETEKVYDDLFFE--SLDGIANALD-----------------NVEARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~--~~DvVi~a~D-----------------n~~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
..+..++.+... + ..+++ +.|+||++.. |+.+-..+-+.|.+.+. .+|..++.+.+|
T Consensus 58 ~~~~~Dl~d~~~-~--~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 58 AFHETDVSDERA-L--ARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG 134 (341)
T ss_dssp EEECCCTTCHHH-H--HHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred eEEEeecCCHHH-H--HHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence 445555543211 1 23444 7899988753 22223345566777765 577777765544
No 151
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.73 E-value=0.33 Score=53.38 Aligned_cols=106 Identities=8% Similarity=0.017 Sum_probs=62.5
Q ss_pred cCHHHHHHHhcCcEEEEecChhhHHHHHHHHHcC-CCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHH
Q psy7300 452 FGKNFQEKLGKLKYFVVGAGAIGCELLKNFAMMG-VGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAI 530 (986)
Q Consensus 452 ~G~~~q~~L~~~~VlvvGaGgiG~e~lknLa~~G-v~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l 530 (986)
|+.+..-.-...+|.|||+|.+|+.++++|+..| . +++++|.+.=.. .|++...+.+
T Consensus 14 ~~~~~~~~~M~m~IgvIG~G~mG~~lA~~L~~~G~~------~V~~~dr~~~~~----------------~~~~~~~~~~ 71 (317)
T 4ezb_A 14 GTENLYFQSMMTTIAFIGFGEAAQSIAGGLGGRNAA------RLAAYDLRFNDP----------------AASGALRARA 71 (317)
T ss_dssp -CCCHHHHTSCCEEEEECCSHHHHHHHHHHHTTTCS------EEEEECGGGGCT----------------TTHHHHHHHH
T ss_pred CcccCcccccCCeEEEECccHHHHHHHHHHHHcCCC------eEEEEeCCCccc----------------cchHHHHHHH
Confidence 4444332224578999999999999999999999 5 899998653100 1233333333
Q ss_pred HhhCCCceEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHH--cCCcEEEEee
Q psy7300 531 KVMNPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVY--SRKPLLESGT 594 (986)
Q Consensus 531 ~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~--~~~pli~~g~ 594 (986)
.+.. + .... ..+..+++|+||.|+-.......+..+... .+..+|+.++
T Consensus 72 ~~~g--~----~~~s---------~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st 122 (317)
T 4ezb_A 72 AELG--V----EPLD---------DVAGIACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNS 122 (317)
T ss_dssp HHTT--C----EEES---------SGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCS
T ss_pred HHCC--C----CCCC---------HHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCC
Confidence 3321 1 0001 134567788888888776665555544332 2445666654
No 152
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.72 E-value=0.18 Score=55.96 Aligned_cols=77 Identities=12% Similarity=0.290 Sum_probs=54.3
Q ss_pred HHhhcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCC---CCE
Q psy7300 71 RRMASSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNP---YVS 146 (986)
Q Consensus 71 ~kL~~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp---~V~ 146 (986)
+.....+|.|+|+|.+|+.+|..|++.|. .+++|+|-+ ..|++..+.-|+...+ ...
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI-------------------EDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC-------------------hHHHHHHHHhhhhhhhccCCCe
Confidence 46678899999999999999999999997 579999942 2466666666665432 223
Q ss_pred EEeecCCCCHhhhccccEEEEec
Q psy7300 147 TKAYTGELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 147 v~~~~~~~~~~~l~~~dvVI~~~ 169 (986)
+.. ..+ .+-++++|+||.+.
T Consensus 76 i~~-~~d--~~~~~~aDiVvi~a 95 (331)
T 4aj2_A 76 IVS-SKD--YSVTANSKLVIITA 95 (331)
T ss_dssp EEE-CSS--GGGGTTEEEEEECC
T ss_pred EEE-cCC--HHHhCCCCEEEEcc
Confidence 322 222 23488999999875
No 153
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.68 E-value=0.36 Score=55.21 Aligned_cols=91 Identities=21% Similarity=0.343 Sum_probs=63.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
+.+|+|+|+|-+|..+++.|...|+ .++++|.|.- +++ .+++.. + .++..+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v~----~~~~~g--~--~vi~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HIE----TLRKFG--M--KVFYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HHH----HHHHTT--C--CCEESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HHH----HHHhCC--C--eEEEcCC
Confidence 4589999999999999999999997 6999997531 222 233322 2 2233333
Q ss_pred -CHhh-----hccccEEEEecCCHHHHHHHHHHHHHcCCc-EEEee
Q psy7300 155 -SEAF-----IKKFRVVVLTNSTYDEQLAISQITHANDIA-LIIAD 193 (986)
Q Consensus 155 -~~~~-----l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip-~I~~~ 193 (986)
+++. +.++|+||+++++......+...+++.+.. .|.+.
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence 3333 467899999999988888888899887643 34443
No 154
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.67 E-value=0.53 Score=51.43 Aligned_cols=75 Identities=19% Similarity=0.287 Sum_probs=51.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC----CCCEEEee
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN----PYVSTKAY 150 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN----p~V~v~~~ 150 (986)
.+|.|||+|.+|+.+|..|+..|+ ..++++|.+. .|++.....+...+ ..+.+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~~- 61 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE-------------------AKVKADQIDFQDAMANLEAHGNIVI- 61 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSSSCCEEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH-------------------HHHHHHHHHHHhhhhhcCCCeEEEe-
Confidence 479999999999999999999997 7899998532 23433333333221 2344432
Q ss_pred cCCCCHhhhccccEEEEecCCHH
Q psy7300 151 TGELSEAFIKKFRVVVLTNSTYD 173 (986)
Q Consensus 151 ~~~~~~~~l~~~dvVI~~~~~~~ 173 (986)
.+. +.++++|+||.|.....
T Consensus 62 -~d~--~~~~~aDvViiav~~~~ 81 (309)
T 1hyh_A 62 -NDW--AALADADVVISTLGNIK 81 (309)
T ss_dssp -SCG--GGGTTCSEEEECCSCGG
T ss_pred -CCH--HHhCCCCEEEEecCCcc
Confidence 232 55789999999986533
No 155
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.66 E-value=0.35 Score=53.15 Aligned_cols=82 Identities=13% Similarity=0.044 Sum_probs=53.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
..+|.|||+|.+|..+|++|+..|...++++|.+.-.. .|++...+.+.+.. + . ..+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~----------------~~~~~~~~~~~~~g--~---~-~~s- 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDP----------------AASGALRARAAELG--V---E-PLD- 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCT----------------TTHHHHHHHHHHTT--C---E-EES-
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccc----------------cchHHHHHHHHHCC--C---C-CCC-
Confidence 46899999999999999999999965899998643100 13333444444432 2 1 101
Q ss_pred CHhhhccccEEEEecCCHHHHHHHH
Q psy7300 155 SEAFIKKFRVVVLTNSTYDEQLAIS 179 (986)
Q Consensus 155 ~~~~l~~~dvVI~~~~~~~~~~~i~ 179 (986)
..+.+++.|+||.|..+......+.
T Consensus 81 ~~e~~~~aDvVi~avp~~~~~~~~~ 105 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAATKAVAA 105 (317)
T ss_dssp SGGGGGGCSEEEECCCGGGHHHHHH
T ss_pred HHHHHhcCCEEEEecCCHHHHHHHH
Confidence 2456778899998886655444443
No 156
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=92.62 E-value=0.19 Score=55.74 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=53.6
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
+.+++|+|.|+ |++|+++++.|+.. |. .++++++.+. .|...+++.+ . ..
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~-----~~V~~~~r~~-------------------~~~~~~~~~~---~-~~ 70 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNA-----KKIIVYSRDE-------------------LKQSEMAMEF---N-DP 70 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCC-----SEEEEEESCH-------------------HHHHHHHHHH---C-CT
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCC-----CEEEEEECCh-------------------hhHHHHHHHh---c-CC
Confidence 56789999996 99999999999998 87 5888887542 1222222222 1 23
Q ss_pred eEEEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 538 NITYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 538 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
.+..+..++.+... + ...++++|+||.+..
T Consensus 71 ~v~~~~~Dl~d~~~-l--~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 71 RMRFFIGDVRDLER-L--NYALEGVDICIHAAA 100 (344)
T ss_dssp TEEEEECCTTCHHH-H--HHHTTTCSEEEECCC
T ss_pred CEEEEECCCCCHHH-H--HHHHhcCCEEEECCC
Confidence 56666666654221 1 356778999998763
No 157
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.57 E-value=0.13 Score=57.67 Aligned_cols=121 Identities=12% Similarity=0.202 Sum_probs=70.9
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhh-CCCce
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVM-NPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~-np~~~ 538 (986)
+...+|.|||+|.+|..++++|+..|. .++++|.+.=....+... |-.-+....+.+... .|++-
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~------~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvV 85 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH------ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVV 85 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC------EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEE
Confidence 456899999999999999999999997 899998764322222211 111111122333321 34555
Q ss_pred EEEEEcccCCccccccc--cccccCCCEEEEcCCC-HHHHHHHHHHHHHcCCcEEEEeecCC
Q psy7300 539 ITYHENRVGPETEKVYD--DLFFESLDGIANALDN-VEARIYMDRRCVYSRKPLLESGTLGT 597 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~--~~f~~~~DvVi~a~Dn-~~ar~~l~~~c~~~~~pli~~g~~G~ 597 (986)
|.+.... ..+..+. ...+..-++||++.-. +..-..+.+.+...++.++++++.|.
T Consensus 86 i~~vp~~---~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 86 WLMVPAA---VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp EECSCGG---GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred EEeCCHH---HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 5444333 1111111 1234556788887544 34445566677778888999887764
No 158
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.57 E-value=0.18 Score=56.65 Aligned_cols=115 Identities=17% Similarity=0.286 Sum_probs=67.7
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhc-CCCCEEEeec
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQL-NPYVSTKAYT 151 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~l-Np~V~v~~~~ 151 (986)
++..+|.|||+|.+|..+|++|...|. .++++|.+.-....+... |-..+....+.+... .|++-+....
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 345789999999999999999999995 799998754322222111 100000111222222 2455555444
Q ss_pred CCCCHh-------hhccccEEEEecC-CHHHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 152 GELSEA-------FIKKFRVVVLTNS-TYDEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 152 ~~~~~~-------~l~~~dvVI~~~~-~~~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
....++ .++.-++||++.. .+....++.+.+.+.++.|+.+.+.|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 332111 2334568887764 44555677777888888888877665
No 159
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=92.56 E-value=0.34 Score=53.07 Aligned_cols=71 Identities=17% Similarity=0.254 Sum_probs=50.6
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh----cCCCCEEEeecC
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ----LNPYVSTKAYTG 152 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~----lNp~V~v~~~~~ 152 (986)
||.|+|+|.+|+.++..|+..|+++++|+|-+. .|++..+..|.+ ++..+++....+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP-------------------GKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh-------------------hhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 689999999999999999999996699999542 133332333333 445666665432
Q ss_pred CCCHhhhccccEEEEec
Q psy7300 153 ELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~ 169 (986)
.+-+++.|+||.+.
T Consensus 62 ---~~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 62 ---YEDMRGSDIVLVTA 75 (308)
T ss_dssp ---GGGGTTCSEEEECC
T ss_pred ---HHHhCCCCEEEEeC
Confidence 24578999999984
No 160
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.43 E-value=0.22 Score=54.88 Aligned_cols=102 Identities=11% Similarity=0.066 Sum_probs=63.6
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+..++|+|.|+ |.+|..+++.|+..|. ++++++.+. .-...|...+ +.+.. +.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~------~V~~l~R~~---------------~~~~~~~~~~-~~l~~--~~-- 61 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR------PTYILARPG---------------PRSPSKAKIF-KALED--KG-- 61 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC------CEEEEECSS---------------CCCHHHHHHH-HHHHH--TT--
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC------CEEEEECCC---------------CCChhHHHHH-HHHHh--CC--
Confidence 44679999998 9999999999999986 788876543 0011222211 11221 33
Q ss_pred EEEEEcccCCcccccccccccc--CCCEEEEcCC--CHHHHHHHHHHHHHcC-CcEE
Q psy7300 539 ITYHENRVGPETEKVYDDLFFE--SLDGIANALD--NVEARIYMDRRCVYSR-KPLL 590 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~--~~DvVi~a~D--n~~ar~~l~~~c~~~~-~pli 590 (986)
++.+..++.+.. . + ...++ ++|+||.+.. |+..-..+-+.|...+ ++.+
T Consensus 62 v~~~~~Dl~d~~-~-l-~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 62 AIIVYGLINEQE-A-M-EKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp CEEEECCTTCHH-H-H-HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred cEEEEeecCCHH-H-H-HHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 445555665321 1 1 35667 9999999865 5666667778888877 6544
No 161
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.42 E-value=0.7 Score=50.26 Aligned_cols=109 Identities=18% Similarity=0.167 Sum_probs=65.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC--CCCEEEeecC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN--PYVSTKAYTG 152 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN--p~V~v~~~~~ 152 (986)
+.||.+||+|-.|..+|+||+.+|. +++++|.+.-....+... |-..+ ..+.++- .++-+.....
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~--------G~~~~----~s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL--------GATVV----ENAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTT--------TCEEC----SSGGGGCCTTCEEEECCSS
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc--------CCeEe----CCHHHHHhcCCceeeeccc
Confidence 4589999999999999999999997 689998654333332211 11111 1122222 2333333222
Q ss_pred CC------CHh---hhccccEEEEec-CCHHHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 153 EL------SEA---FIKKFRVVVLTN-STYDEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 153 ~~------~~~---~l~~~dvVI~~~-~~~~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
+. ..+ .+..-++||++. .++....++.+.+.++|+.|+.+.+.|
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsG 125 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFA 125 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCC
Confidence 11 111 234556888765 567778889999999999999988777
No 162
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.42 E-value=0.26 Score=52.96 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=31.0
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|+|+||+|..++..|+..|. +++|+|.+
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~------~v~v~~R~ 151 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQ------NIVLANRT 151 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTC------EEEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 567899999999999999999999985 89998754
No 163
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.41 E-value=0.34 Score=52.75 Aligned_cols=72 Identities=18% Similarity=0.204 Sum_probs=50.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC----CCCEEEeec
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVK-SVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN----PYVSTKAYT 151 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg-~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN----p~V~v~~~~ 151 (986)
+|.|+|+|.+|+.+|..|+..|.. +++|+|.+. .|++..+..|++.+ ...+|....
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 62 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE-------------------DLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH-------------------HHHHHHHHHHHHHHHTTTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh-------------------HHHHHHHHHHHhhhhhcCCCCEEEEeC
Confidence 799999999999999999999974 899999532 23332222333322 345666533
Q ss_pred CCCCHhhhccccEEEEecC
Q psy7300 152 GELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~ 170 (986)
+ .+-++++|+||.+..
T Consensus 63 d---~~a~~~aDiVViaag 78 (294)
T 1oju_A 63 D---YSLLKGSEIIVVTAG 78 (294)
T ss_dssp C---GGGGTTCSEEEECCC
T ss_pred C---HHHhCCCCEEEECCC
Confidence 2 567889999999863
No 164
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=92.37 E-value=0.16 Score=55.44 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=29.2
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY------EVYGADRR 36 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECC
Confidence 4678999998 9999999999999987 88888754
No 165
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.36 E-value=0.25 Score=54.47 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=31.5
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+...||.|+|+|.+|+.++..|+..|+ ++++++|-+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~-----~~v~l~Di~ 38 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQL-----GDVVLFDIA 38 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCC
Confidence 345799999999999999999999988 489999865
No 166
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.35 E-value=0.2 Score=53.07 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=30.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC---CeEEEEeCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV---KSVTLHDTTA 109 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV---g~itlvD~d~ 109 (986)
..+|.|||+|.+|+.++++|...|. ..++++|.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 3589999999999999999999995 6899998653
No 167
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.31 E-value=0.29 Score=54.08 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.9
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..||.|+|+|.+|+.++..|+..|+. ++++++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~----~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGIT----DELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEecc
Confidence 46899999999999999999999984 689999853
No 168
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.31 E-value=0.45 Score=48.56 Aligned_cols=91 Identities=11% Similarity=0.173 Sum_probs=59.8
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 77 DVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 77 ~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
+|+|.| .|++|.++++.|+..|. ++++++.+.-....+ +. ++.+..++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~~--~~~~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------NN--VKAVHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------TT--EEEEECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------CC--ceEEEeccc
Confidence 699999 78999999999999994 788888653221111 12 333333332
Q ss_pred --H----hhhccccEEEEecC---------CHHHHHHHHHHHHHcCC-cEEEeecccc
Q psy7300 156 --E----AFIKKFRVVVLTNS---------TYDEQLAISQITHANDI-ALIIADTRGL 197 (986)
Q Consensus 156 --~----~~l~~~dvVI~~~~---------~~~~~~~i~~~c~~~~i-p~I~~~~~G~ 197 (986)
. +.++++|+||.+.. +......+.+.|++.++ .+|..++.+.
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 109 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS 109 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence 2 24567888887753 33445677788888886 4777666553
No 169
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.28 E-value=0.27 Score=54.39 Aligned_cols=73 Identities=21% Similarity=0.245 Sum_probs=52.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCC----CCEEEe
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNP----YVSTKA 149 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp----~V~v~~ 149 (986)
..+|.|+|+|.+|+.+|..|+..|+ ++++|+|.+ ..|++..+.-|+...| .+++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~- 64 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTS- 64 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEE-
Confidence 4689999999999999999999998 689999952 2355555555555443 33443
Q ss_pred ecCCCCHhhhccccEEEEecC
Q psy7300 150 YTGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 150 ~~~~~~~~~l~~~dvVI~~~~ 170 (986)
.. +.+-+++.|+||.+..
T Consensus 65 -~~--~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 65 -YG--TYEDCKDADIVCICAG 82 (326)
T ss_dssp -EE--CGGGGTTCSEEEECCS
T ss_pred -eC--cHHHhCCCCEEEEecc
Confidence 22 2346789999999863
No 170
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.28 E-value=0.41 Score=53.59 Aligned_cols=103 Identities=14% Similarity=0.054 Sum_probs=62.9
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
..++|+|.|+ |.||+.+++.|+..|. +++++|.+.-....+ ..+. +
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~-------------------------~~~~--v 74 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH------YVIASDWKKNEHMTE-------------------------DMFC--D 74 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSCCSSSCG-------------------------GGTC--S
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC------eEEEEECCCccchhh-------------------------ccCC--c
Confidence 3468999998 9999999999999987 899888653110000 0122 3
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCC----------H--------HHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDN----------V--------EARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn----------~--------~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
+.+..++.... . + ...++++|+||++... . .+-..+-+.|...++ .+|..++.+.+|
T Consensus 75 ~~~~~Dl~d~~-~-~-~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~ 150 (379)
T 2c5a_A 75 EFHLVDLRVME-N-C-LKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 150 (379)
T ss_dssp EEEECCTTSHH-H-H-HHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSC
T ss_pred eEEECCCCCHH-H-H-HHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeC
Confidence 34444554221 1 1 3456788998887431 1 112345567777776 577777765444
No 171
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=92.28 E-value=0.39 Score=53.65 Aligned_cols=108 Identities=18% Similarity=0.213 Sum_probs=63.9
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcC-CCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMG-VGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN 536 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~G-v~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~ 536 (986)
++..++|+|.|+ |.||..+++.|+..| . +++++|...-.. +..+- ..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~----~~~l~---------------------~~ 77 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVN------QVHVVDNLLSAE----KINVP---------------------DH 77 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCS------EEEEECCCTTCC----GGGSC---------------------CC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCc------eEEEEECCCCCc----hhhcc---------------------CC
Confidence 466789999997 899999999999998 5 888887542110 00000 01
Q ss_pred ceEEEEEcccCCccccccccccccCCCEEEEcCCCH-----------------HHHHHHHHHHHHc-CC-cEEEEeecCC
Q psy7300 537 VNITYHENRVGPETEKVYDDLFFESLDGIANALDNV-----------------EARIYMDRRCVYS-RK-PLLESGTLGT 597 (986)
Q Consensus 537 ~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~-----------------~ar~~l~~~c~~~-~~-pli~~g~~G~ 597 (986)
-+++.+..++.... .+ ...++++|+||.+.... .+-..+-+.|... ++ .+|..++.+.
T Consensus 78 ~~v~~~~~Dl~d~~--~l-~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~v 154 (377)
T 2q1s_A 78 PAVRFSETSITDDA--LL-ASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCS 154 (377)
T ss_dssp TTEEEECSCTTCHH--HH-HHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--
T ss_pred CceEEEECCCCCHH--HH-HHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHH
Confidence 23455555554321 11 34567899999875421 1223455667666 54 6888777665
Q ss_pred cce
Q psy7300 598 KGN 600 (986)
Q Consensus 598 ~G~ 600 (986)
+|.
T Consensus 155 yg~ 157 (377)
T 2q1s_A 155 IAE 157 (377)
T ss_dssp ---
T ss_pred cCC
Confidence 553
No 172
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=92.27 E-value=0.32 Score=51.41 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=30.1
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA------RLLLFSRN 40 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56778999986 8999999999999997 88888754
No 173
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.26 E-value=0.78 Score=49.50 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=60.5
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 75 SSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 75 ~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
..+|||.| .|.+|+.+++.|...|. +++.++... ....+. . ++....+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~~---------------------------~--~~~~~~D 50 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSI-GNKAIN---------------------------D--YEYRVSD 50 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC-C--------------------------------C--CEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCC-CcccCC---------------------------c--eEEEEcc
Confidence 36899999 68899999999999996 788888651 110011 1 2222222
Q ss_pred CCH----hhhccccEEEEecCC-------------HHHHHHHHHHHHHcCCc-EEEeecccceE
Q psy7300 154 LSE----AFIKKFRVVVLTNST-------------YDEQLAISQITHANDIA-LIIADTRGLFA 199 (986)
Q Consensus 154 ~~~----~~l~~~dvVI~~~~~-------------~~~~~~i~~~c~~~~ip-~I~~~~~G~~G 199 (986)
+.. +.++++|+||.+... ......+.+.|++.+++ ||+.++.+.+|
T Consensus 51 l~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 51 YTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp CCHHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred ccHHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 221 234577777766421 22335677888888887 88888877765
No 174
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.24 E-value=0.31 Score=51.10 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=31.3
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
++.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~------~V~~~~r~ 42 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA------AVVVADIN 42 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcCC
Confidence 467889999996 8999999999999998 89888754
No 175
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=92.19 E-value=0.4 Score=52.53 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=29.3
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+..++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGD------KVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 456688999995 8999999999999986 89998865
No 176
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.19 E-value=0.22 Score=56.80 Aligned_cols=73 Identities=26% Similarity=0.397 Sum_probs=51.9
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+...+|+|+|+|++|..+++.|...|+++++++|.+. .|++..++.+. +.+... .
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~-------------------~ra~~la~~~g-----~~~~~~-~ 219 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY-------------------ERAVELARDLG-----GEAVRF-D 219 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH-------------------HHHHHHHHHHT-----CEECCG-G
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHcC-----CceecH-H
Confidence 6789999999999999999999999999999998532 25544444442 121111 1
Q ss_pred CCCHhhhccccEEEEecCC
Q psy7300 153 ELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~ 171 (986)
++ .+.+.++|+||.|+..
T Consensus 220 ~l-~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 220 EL-VDHLARSDVVVSATAA 237 (404)
T ss_dssp GH-HHHHHTCSEEEECCSS
T ss_pred hH-HHHhcCCCEEEEccCC
Confidence 11 3556789999999853
No 177
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=92.10 E-value=0.68 Score=52.44 Aligned_cols=112 Identities=14% Similarity=0.167 Sum_probs=71.2
Q ss_pred HHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhC
Q psy7300 456 FQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMN 534 (986)
Q Consensus 456 ~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~n 534 (986)
....+.+++|+|.|+ |+||+++++.|+..|. .+++++|.. ..+...+.+.+.+..
T Consensus 29 ~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~-----~~V~~~~r~-------------------~~~~~~~~~~l~~~~ 84 (399)
T 3nzo_A 29 LQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNP-----QKLHVVDIS-------------------ENNMVELVRDIRSSF 84 (399)
T ss_dssp HHHHHHTCEEEEETTTSHHHHHHHHHHHTTCC-----SEEEEECSC-------------------HHHHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEEcCChHHHHHHHHHHHHCCC-----CEEEEEECC-------------------cchHHHHHHHHHHhc
Confidence 345578899999996 8899999999999885 388888642 123344445555554
Q ss_pred C--CceEEEEEcccCCccccccccccc--cCCCEEEEcCC--------CH-----------HHHHHHHHHHHHcCC-cEE
Q psy7300 535 P--NVNITYHENRVGPETEKVYDDLFF--ESLDGIANALD--------NV-----------EARIYMDRRCVYSRK-PLL 590 (986)
Q Consensus 535 p--~~~i~~~~~~v~~~~~~~~~~~f~--~~~DvVi~a~D--------n~-----------~ar~~l~~~c~~~~~-pli 590 (986)
+ ...++.+..++.+... ...++ .+.|+|+++.. ++ .+-..+-+.|..+++ .+|
T Consensus 85 ~~~~~~v~~~~~Dl~d~~~---~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V 161 (399)
T 3nzo_A 85 GYINGDFQTFALDIGSIEY---DAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYF 161 (399)
T ss_dssp CCCSSEEEEECCCTTSHHH---HHHHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCcEEEEEEeCCCHHH---HHHHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 4 3467777777764321 12222 58999998753 22 112345667777775 355
Q ss_pred EEee
Q psy7300 591 ESGT 594 (986)
Q Consensus 591 ~~g~ 594 (986)
..++
T Consensus 162 ~iSS 165 (399)
T 3nzo_A 162 CVST 165 (399)
T ss_dssp EECC
T ss_pred EEeC
Confidence 5554
No 178
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.02 E-value=0.32 Score=53.57 Aligned_cols=77 Identities=18% Similarity=0.107 Sum_probs=51.8
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhc----CCCCEEE
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQL----NPYVSTK 148 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~l----Np~V~v~ 148 (986)
++..+|.|+|+|.+|+.+|..|+..|+++++|+|.+.. ..|++..+..|... .....+.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~-----------------~~~~~g~a~dl~~~~~~~~~~~~i~ 68 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQL-----------------ENPTKGKALDMLEASPVQGFDANII 68 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGG-----------------HHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccch-----------------HHHHHHhhhhHHHhhhhccCCCEEE
Confidence 45679999999999999999999999989999996421 11222222223222 2234454
Q ss_pred eecCCCCHhhhccccEEEEec
Q psy7300 149 AYTGELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 149 ~~~~~~~~~~l~~~dvVI~~~ 169 (986)
... +.+-++++|+||.+.
T Consensus 69 ~t~---d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 69 GTS---DYADTADSDVVVITA 86 (315)
T ss_dssp EES---CGGGGTTCSEEEECC
T ss_pred EcC---CHHHhCCCCEEEEeC
Confidence 322 235678999999986
No 179
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.00 E-value=0.45 Score=48.53 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=27.9
Q ss_pred cEEEEe-cChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 464 KYFVVG-AGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 464 ~VlvvG-aGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
||+|+| +|.+|+.+++.|+..|. +++++|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~------~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH------EIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC------EEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 799999 99999999999999887 88888754
No 180
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.93 E-value=0.37 Score=52.97 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=50.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCC----CCEEEe
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNP----YVSTKA 149 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp----~V~v~~ 149 (986)
..+|.|+|+|.+|+.+|..|...|. ++++++|-+. .|++.....|.+..+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~-------------------~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE-------------------SKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc-------------------chHHHHHhhHHHHhhhcCCCeEEEc
Confidence 4689999999999999999999885 7899999531 133333333443333 555553
Q ss_pred ecCCCCHhhhccccEEEEec
Q psy7300 150 YTGELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 150 ~~~~~~~~~l~~~dvVI~~~ 169 (986)
. +.+-++++|+||.|.
T Consensus 67 --~--~~~al~~aDvViia~ 82 (316)
T 1ldn_A 67 --G--DYDDCRDADLVVICA 82 (316)
T ss_dssp --C--CGGGTTTCSEEEECC
T ss_pred --C--cHHHhCCCCEEEEcC
Confidence 2 234588999999984
No 181
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.92 E-value=0.34 Score=53.57 Aligned_cols=75 Identities=19% Similarity=0.218 Sum_probs=52.4
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCC---Cc
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNP---NV 537 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np---~~ 537 (986)
...||.|+|+|.+|+.++..|+..|+. ++|+++|.+ ..|++..+.-+....| .+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~ 64 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPK 64 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCc
Confidence 457899999999999999999999985 689999853 2355544444554433 33
Q ss_pred eEEEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 538 NITYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 538 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
++. .. +.+-+.++|+||.+..
T Consensus 65 ~i~--~~----------~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 65 KIY--SA----------EYSDAKDADLVVITAG 85 (326)
T ss_dssp EEE--EC----------CGGGGTTCSEEEECCC
T ss_pred EEE--EC----------cHHHhcCCCEEEECCC
Confidence 332 11 1234789999999865
No 182
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.89 E-value=0.29 Score=52.72 Aligned_cols=64 Identities=25% Similarity=0.338 Sum_probs=43.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
.+++++|+|.|+ ||||.++++.|+..|. ++++++.+. .|.+.+.+.+.+.++ .
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~-~ 62 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI------MVVLTCRDV-------------------TKGHEAVEKLKNSNH-E 62 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTTC-C
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhcCC-C
Confidence 456788999996 8999999999999997 899887542 344455555655543 2
Q ss_pred eEEEEEcccCC
Q psy7300 538 NITYHENRVGP 548 (986)
Q Consensus 538 ~i~~~~~~v~~ 548 (986)
++..+..++..
T Consensus 63 ~~~~~~~Dl~~ 73 (311)
T 3o26_A 63 NVVFHQLDVTD 73 (311)
T ss_dssp SEEEEECCTTS
T ss_pred ceEEEEccCCC
Confidence 45566655543
No 183
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=91.88 E-value=0.53 Score=51.97 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=29.1
Q ss_pred HHHHhhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 69 AMRRMASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 69 ~q~kL~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
.+..+...+|||.|+ |.+|+.+++.|+..|...+++++...
T Consensus 40 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 40 GGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 344567789999996 89999999999999966888888643
No 184
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=91.88 E-value=0.39 Score=50.85 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=62.4
Q ss_pred cEEEEcC-ChhHHHHHHHHHHh-CCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 77 DVLISGL-GGLGVEIAKNVILS-GVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 77 ~VlIiG~-gglGseiaknLvl~-GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
||+|+|+ |.+|..+++.+... |..=+.++|.. +|+ +.+....++|-|+.-.-..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl---------~~~~~~~~DvvIDfT~p~a 57 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPL---------SLLTDGNTEVVIDFTHPDV 57 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCT---------HHHHHTTCCEEEECSCTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCH---------HHHhccCCcEEEEccChHH
Confidence 7999997 99999999998765 76545577753 111 1121235666665543222
Q ss_pred CHhhh-----ccccEEEEecC-CHHHHHHHHHHHHHc-CCcEEEeecccce
Q psy7300 155 SEAFI-----KKFRVVVLTNS-TYDEQLAISQITHAN-DIALIIADTRGLF 198 (986)
Q Consensus 155 ~~~~l-----~~~dvVI~~~~-~~~~~~~i~~~c~~~-~ip~I~~~~~G~~ 198 (986)
..+.+ .+.++||.++. +.+....|.+.|++. ++|++.+..+++-
T Consensus 58 ~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siG 108 (245)
T 1p9l_A 58 VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIG 108 (245)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHH
T ss_pred HHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHH
Confidence 22222 36678887663 445566788888876 8898888766653
No 185
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.87 E-value=0.32 Score=52.16 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=50.1
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+..++|+|+|+||+|..++..|...| .+++++|.+. .|++.+++.+.... . +...
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R~~-------------------~~~~~la~~~~~~~-~--~~~~-- 171 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNRTV-------------------SRAEELAKLFAHTG-S--IQAL-- 171 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSH-------------------HHHHHHHHHTGGGS-S--EEEC--
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEECCH-------------------HHHHHHHHHhhccC-C--eeEe--
Confidence 46789999999999999999999999 7999987532 35666665554321 1 2221
Q ss_pred CCCHhhh-ccccEEEEecCC
Q psy7300 153 ELSEAFI-KKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l-~~~dvVI~~~~~ 171 (986)
++ ++.. .++|+||.|+..
T Consensus 172 ~~-~~~~~~~~DivVn~t~~ 190 (271)
T 1nyt_A 172 SM-DELEGHEFDLIINATSS 190 (271)
T ss_dssp CS-GGGTTCCCSEEEECCSC
T ss_pred cH-HHhccCCCCEEEECCCC
Confidence 11 1221 578999888754
No 186
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.84 E-value=0.5 Score=50.10 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=52.6
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+...+|.|||+|.+|..+++.|...|...++++|.+. .+++.+.+.+ .+.+ ..
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~-------------------~~~~~~~~~~-----g~~~--~~- 60 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE-------------------ESARELAQKV-----EAEY--TT- 60 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH-------------------HHHHHHHHHT-----TCEE--ES-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH-------------------HHHHHHHHHc-----CCce--eC-
Confidence 3456899999999999999999999986688887432 2333333322 1222 11
Q ss_pred CCCHhhhccccEEEEecCCHHHHHHHHHH
Q psy7300 153 ELSEAFIKKFRVVVLTNSTYDEQLAISQI 181 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~~~~~~~i~~~ 181 (986)
+ .++.+.++|+||.|..+......+..+
T Consensus 61 ~-~~~~~~~~Dvvi~av~~~~~~~v~~~l 88 (266)
T 3d1l_A 61 D-LAEVNPYAKLYIVSLKDSAFAELLQGI 88 (266)
T ss_dssp C-GGGSCSCCSEEEECCCHHHHHHHHHHH
T ss_pred C-HHHHhcCCCEEEEecCHHHHHHHHHHH
Confidence 1 234567899999999765543344433
No 187
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.76 E-value=0.35 Score=51.91 Aligned_cols=73 Identities=15% Similarity=0.286 Sum_probs=51.7
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
++.++|+|+|+||+|..++..|...| .++++++.+. .|++.+++.+.... . +....
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~-------------------~~a~~l~~~~~~~~-~--~~~~~- 172 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTF-------------------SKTKELAERFQPYG-N--IQAVS- 172 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSH-------------------HHHHHHHHHHGGGS-C--EEEEE-
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCH-------------------HHHHHHHHHccccC-C--eEEee-
Confidence 46789999999999999999999999 8999998532 36777776665421 2 22211
Q ss_pred CCCHhhh-ccccEEEEecCC
Q psy7300 153 ELSEAFI-KKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l-~~~dvVI~~~~~ 171 (986)
+ ++.. .++|+||.|+..
T Consensus 173 -~-~~~~~~~~DivIn~t~~ 190 (272)
T 1p77_A 173 -M-DSIPLQTYDLVINATSA 190 (272)
T ss_dssp -G-GGCCCSCCSEEEECCCC
T ss_pred -H-HHhccCCCCEEEECCCC
Confidence 1 1211 378999988854
No 188
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=91.76 E-value=0.81 Score=48.71 Aligned_cols=98 Identities=8% Similarity=0.043 Sum_probs=62.4
Q ss_pred CcEEEEec-ChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
++|+|.|+ |.||..+++.|+.. |. ++++++.+.-....+ ..+ .++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~------~V~~~~R~~~~~~~~-------------------------~~~--~v~ 47 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID------HFHIGVRNVEKVPDD-------------------------WRG--KVS 47 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT------TEEEEESSGGGSCGG-------------------------GBT--TBE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC------cEEEEECCHHHHHHh-------------------------hhC--CCE
Confidence 37999996 89999999999987 66 888887653211111 012 244
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCC-------HHHHHHHHHHHHHcCCc-EEEEeecC
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDN-------VEARIYMDRRCVYSRKP-LLESGTLG 596 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn-------~~ar~~l~~~c~~~~~p-li~~g~~G 596 (986)
.+..++.+.. . + ...++++|+||++... ...-..+-+.|.+.+++ +|..++.|
T Consensus 48 ~~~~D~~d~~-~-l-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 48 VRQLDYFNQE-S-M-VEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp EEECCTTCHH-H-H-HHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred EEEcCCCCHH-H-H-HHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 5555554321 1 1 4567899999988653 23334566778888764 77776643
No 189
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.72 E-value=0.16 Score=55.24 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=29.8
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC------eEEEEcCCH
Confidence 589999999999999999999998 899988653
No 190
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.70 E-value=0.45 Score=50.60 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=31.0
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
++. +|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 566 99999999999999999999998 89999864
No 191
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.69 E-value=0.46 Score=51.72 Aligned_cols=35 Identities=23% Similarity=0.195 Sum_probs=30.3
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.||.|+|+|.+|..++..|+..|.. ++++++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~----~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEECCh
Confidence 4799999999999999999999874 5899998543
No 192
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.67 E-value=0.81 Score=49.93 Aligned_cols=74 Identities=23% Similarity=0.373 Sum_probs=48.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHH--HHH-HHHhhcCCCCEEEee
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAE--VSH-TNLSQLNPYVSTKAY 150 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~--a~~-~~L~~lNp~V~v~~~ 150 (986)
..+|+|+|+|++|+.++..|+..|. ++++++|.+. .+++ +.. .+-..+.+.+.+...
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~ 67 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK-------------------ERVEAEVLDMQHGSSFYPTVSIDGS 67 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHHHTGGGSTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHHHHhhhhhcCCeEEEeC
Confidence 4689999999999999999999995 4799998642 1222 110 111122234455443
Q ss_pred cCCCCHhhhccccEEEEecC
Q psy7300 151 TGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 151 ~~~~~~~~l~~~dvVI~~~~ 170 (986)
. +.+-++++|+||.|..
T Consensus 68 ~---~~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 68 D---DPEICRDADMVVITAG 84 (319)
T ss_dssp S---CGGGGTTCSEEEECCC
T ss_pred C---CHHHhCCCCEEEECCC
Confidence 2 2345678999999983
No 193
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.60 E-value=0.75 Score=50.18 Aligned_cols=36 Identities=25% Similarity=0.390 Sum_probs=30.5
Q ss_pred HhhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 72 RMASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 72 kL~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d 108 (986)
.+.+.+|||.|+ |++|+++++.|+..|. +++++|..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 455678999996 8999999999999995 78888864
No 194
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=91.60 E-value=0.66 Score=50.50 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=63.4
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
.+++|+|.|+ |+||..+++.|+..|-+ -+++++|...-. .++.+ +..+...-++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~----~~V~~~~r~~~~-~~~~~--------------------~~~~~~~~~~ 56 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPD----WEVINIDKLGYG-SNPAN--------------------LKDLEDDPRY 56 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTT----CEEEEEECCCTT-CCGGG--------------------GTTTTTCTTE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCC----CEEEEEecCccc-CchhH--------------------HhhhccCCce
Confidence 3568999996 99999999999998731 278888754210 01100 0001001235
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC--cEEEEeecCCcc
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDN-----------------VEARIYMDRRCVYSRK--PLLESGTLGTKG 599 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~--pli~~g~~G~~G 599 (986)
+.+..++.... .+ ...+.++|+||++... +.+-..+-+.|...+. .+|..++.+.+|
T Consensus 57 ~~~~~Dl~d~~--~~-~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 57 TFVKGDVADYE--LV-KELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp EEEECCTTCHH--HH-HHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred EEEEcCCCCHH--HH-HHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 55555554321 11 2445788999987542 1222345566776653 678777765544
No 195
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=91.57 E-value=0.37 Score=51.63 Aligned_cols=36 Identities=17% Similarity=0.411 Sum_probs=31.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 44 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA------SVMIVGRN 44 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 567889999986 8999999999999998 89998754
No 196
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.49 E-value=0.36 Score=51.70 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=27.2
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+|.|||+|.+|+.+++.|+. |. +++++|.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~------~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF------PTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC------eEEEEeCC
Confidence 479999999999999999998 87 78888743
No 197
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.49 E-value=0.25 Score=54.36 Aligned_cols=36 Identities=14% Similarity=0.282 Sum_probs=32.0
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|.+
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~------~V~~~dr~ 171 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGF------PLRCWSRS 171 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTC------CEEEEESS
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 4678899999999999999999998887 88988854
No 198
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.47 E-value=0.28 Score=53.84 Aligned_cols=63 Identities=14% Similarity=0.256 Sum_probs=45.6
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+. .|.+.+.+.+....+..+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~------~Vv~~~r~~-------------------~~~~~~~~~l~~~~~~~~ 60 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC------KVAIADIRQ-------------------DSIDKALATLEAEGSGPE 60 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHTCGGG
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHhcCCCCe
Confidence 56788999997 8999999999999998 888887542 344445555555555445
Q ss_pred EEEEEcccC
Q psy7300 539 ITYHENRVG 547 (986)
Q Consensus 539 i~~~~~~v~ 547 (986)
+..+..++.
T Consensus 61 ~~~~~~Dl~ 69 (319)
T 3ioy_A 61 VMGVQLDVA 69 (319)
T ss_dssp EEEEECCTT
T ss_pred EEEEECCCC
Confidence 666665554
No 199
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=91.47 E-value=0.49 Score=54.93 Aligned_cols=125 Identities=13% Similarity=0.116 Sum_probs=70.2
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHc---CCCcCCCCeEEEEeCCccccccCcccc-CcCCCCCCCcHHHHHHHHHHhhCC
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMM---GVGAGPGGQIFVTDMDLIEKSNLNRQF-LFRPHDVQQPKSATAAKAIKVMNP 535 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~---Gv~~g~~g~i~ivD~D~Ie~sNLnRqf-lf~~~diG~~Ka~~a~~~l~~~np 535 (986)
..++|+|.|+ |+||+++++.|+.. |. ++++++...-....+.|.. .|. -|.+ ......-....
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~------~V~~l~R~~~~~~~~~~l~~~~~---~~~~--~~~~~~~~~~~- 139 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDG------RLICLVRAESDEDARRRLEKTFD---SGDP--ELLRHFKELAA- 139 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTC------EEEEEECSSSHHHHHHHHHGGGC---SSCH--HHHHHHHHHHT-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCC------EEEEEECCCCcHHHHHHHHHHHH---hcch--hhhhhhhhhcc-
Confidence 5678999996 88999999999988 65 8888875421111111100 000 0000 11111111111
Q ss_pred CceEEEEEcccCCcc----ccccccccccCCCEEEEcCC-------------CHHHHHHHHHHHHHcCC-cEEEEeecCC
Q psy7300 536 NVNITYHENRVGPET----EKVYDDLFFESLDGIANALD-------------NVEARIYMDRRCVYSRK-PLLESGTLGT 597 (986)
Q Consensus 536 ~~~i~~~~~~v~~~~----~~~~~~~f~~~~DvVi~a~D-------------n~~ar~~l~~~c~~~~~-pli~~g~~G~ 597 (986)
-+++.+..++.... ...+ ...++++|+||++.. |+.+-..+-+.|...++ .+|..++.+.
T Consensus 140 -~~v~~v~~Dl~~~~~gld~~~~-~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v 217 (478)
T 4dqv_A 140 -DRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADV 217 (478)
T ss_dssp -TTEEEEECCTTSGGGGCCHHHH-HHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGG
T ss_pred -CceEEEEeECCCcccCCCHHHH-HHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhh
Confidence 35667777765321 1111 345678999998753 34444567777887775 7888887664
Q ss_pred cc
Q psy7300 598 KG 599 (986)
Q Consensus 598 ~G 599 (986)
+|
T Consensus 218 ~~ 219 (478)
T 4dqv_A 218 GA 219 (478)
T ss_dssp GT
T ss_pred cC
Confidence 43
No 200
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.42 E-value=0.32 Score=53.27 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=30.5
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
...+|.|||+|.+|+.++++|+..|. ..++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~-----~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGA-----IDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSC-----CEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC-----CeEEEEcCC
Confidence 34689999999999999999999987 589999875
No 201
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.42 E-value=0.4 Score=53.04 Aligned_cols=78 Identities=17% Similarity=0.202 Sum_probs=50.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
...+|.|+|+|.+|+.+|..|+..|...++|+|.+.-. +. | .+..+.+.+..+....++....+
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~---l~----------~--~~~~l~~~~~~~~~~~~i~~t~d- 76 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGV---PQ----------G--KALDLNHCMALIGSPAKIFGENN- 76 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTH---HH----------H--HHHHHHHHHHHHTCCCCEEEESC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHH---HH----------H--HHHHHHhHhhccCCCCEEEECCC-
Confidence 34689999999999999999999999559999964210 00 0 01111122222323445554332
Q ss_pred CCHhhhccccEEEEec
Q psy7300 154 LSEAFIKKFRVVVLTN 169 (986)
Q Consensus 154 ~~~~~l~~~dvVI~~~ 169 (986)
. +-+++.|+||.+.
T Consensus 77 ~--~al~~aD~VI~av 90 (328)
T 2hjr_A 77 Y--EYLQNSDVVIITA 90 (328)
T ss_dssp G--GGGTTCSEEEECC
T ss_pred H--HHHCCCCEEEEcC
Confidence 2 4578999999986
No 202
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=91.30 E-value=0.78 Score=47.53 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=61.4
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 75 SSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 75 ~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
.++|+|.| .|++|.++++.|+..|--++++++.+.-....+. .+ .++.+..+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-------------------------~~--~~~~~~~D 75 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-------------------------PT--NSQIIMGD 75 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-------------------------CT--TEEEEECC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-------------------------cC--CcEEEEec
Confidence 35899999 6899999999999999447888876532211110 01 23334444
Q ss_pred CC-H----hhhccccEEEEecCCHH---HHHHHHHHHHHcCCc-EEEeecccceE
Q psy7300 154 LS-E----AFIKKFRVVVLTNSTYD---EQLAISQITHANDIA-LIIADTRGLFA 199 (986)
Q Consensus 154 ~~-~----~~l~~~dvVI~~~~~~~---~~~~i~~~c~~~~ip-~I~~~~~G~~G 199 (986)
+. + ..+++.|+||.+..... ....+...|++.+++ +|..++.+.++
T Consensus 76 l~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 76 VLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYD 130 (236)
T ss_dssp TTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred CCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecC
Confidence 42 2 35678899997654322 223566777787765 77777776554
No 203
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=91.24 E-value=0.2 Score=55.88 Aligned_cols=93 Identities=13% Similarity=0.116 Sum_probs=61.1
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
.||.|||+ |.+|.|+++.|...-. -+|+.+ ...+..|+. +.+..|...
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~-----~el~~l---------------~S~~~aG~~--------~~~~~p~~~--- 62 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPE-----AKITYL---------------SSRTYAGKK--------LEEIFPSTL--- 62 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT-----EEEEEE---------------ECSTTTTSB--------HHHHCGGGC---
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC-----cEEEEE---------------eCcccccCC--------hHHhChhhc---
Confidence 47999997 8899999999997643 355443 344566754 334455544
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEe
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESG 593 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g 593 (986)
.+..+.+.+ .++++.++|+|+.|+....++.++..+ .|..+||.+
T Consensus 63 ~~l~~~~~~----~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlS 107 (351)
T 1vkn_A 63 ENSILSEFD----PEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLG 107 (351)
T ss_dssp CCCBCBCCC----HHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESS
T ss_pred cCceEEeCC----HHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECC
Confidence 111221111 134558899999999999988888766 566666654
No 204
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.24 E-value=1.2 Score=45.14 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=58.4
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC-
Q psy7300 77 DVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL- 154 (986)
Q Consensus 77 ~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~- 154 (986)
+|+|.|+ |++|+++++.|+..|. ++++++.+. .+. .++.+.+.+ +..++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~-------~~~~~~~~~--~~~D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA-------------------GKI-------TQTHKDINI--LQKDIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS-------------------HHH-------HHHCSSSEE--EECCGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc-------------------hhh-------hhccCCCeE--Eecccc
Confidence 6999994 8999999999999994 788887532 111 111134433 23333
Q ss_pred --CHhhhccccEEEEecCC--------HHHHHHHHHHHHHcC-CcEEEeeccc
Q psy7300 155 --SEAFIKKFRVVVLTNST--------YDEQLAISQITHAND-IALIIADTRG 196 (986)
Q Consensus 155 --~~~~l~~~dvVI~~~~~--------~~~~~~i~~~c~~~~-ip~I~~~~~G 196 (986)
..+.+.++|+||.+... ......+.+.|++.+ ..+|..++.+
T Consensus 53 d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 53 DLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp GCCHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred ChhhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence 22567889999987632 133346667787774 4567666554
No 205
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=91.23 E-value=0.66 Score=52.73 Aligned_cols=114 Identities=17% Similarity=0.077 Sum_probs=69.8
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCC----
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNP---- 535 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np---- 535 (986)
..++|+|.|+ |+||+++++.|+..|. ++++++...-. ....+.+.+.+....+
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~----------------~~~~~~l~~~l~~~~~~~~~ 125 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSH------RIYCFIRADNE----------------EIAWYKLMTNLNDYFSEETV 125 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEE------EEEEEEECSSH----------------HHHHHHHHHHHHHHSCHHHH
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCC------EEEEEECCCCh----------------HHHHHHHHHHHHHhcccccc
Confidence 3458999997 8999999999987776 78877633210 0112223333333321
Q ss_pred ---CceEEEEEcccCCccccccccccccCCCEEEEcCC--------------CHHHHHHHHHHHHHcCCcEEEEeecCCc
Q psy7300 536 ---NVNITYHENRVGPETEKVYDDLFFESLDGIANALD--------------NVEARIYMDRRCVYSRKPLLESGTLGTK 598 (986)
Q Consensus 536 ---~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D--------------n~~ar~~l~~~c~~~~~pli~~g~~G~~ 598 (986)
..++..+..++.... .+. .+.++|+||++.. |+.+-..+-+.|......+|..++.+.
T Consensus 126 ~~~~~~v~~v~~Dl~d~~--~l~--~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~- 200 (427)
T 4f6c_A 126 EMMLSNIEVIVGDFECMD--DVV--LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV- 200 (427)
T ss_dssp HHHHTTEEEEEECC---C--CCC--CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-
T ss_pred ccccCceEEEeCCCCCcc--cCC--CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-
Confidence 135666666665321 222 5689999998754 233334566677776778888888876
Q ss_pred ceE
Q psy7300 599 GNS 601 (986)
Q Consensus 599 G~v 601 (986)
|..
T Consensus 201 G~~ 203 (427)
T 4f6c_A 201 GTY 203 (427)
T ss_dssp GSE
T ss_pred CCC
Confidence 653
No 206
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.22 E-value=0.4 Score=53.39 Aligned_cols=77 Identities=12% Similarity=0.162 Sum_probs=51.9
Q ss_pred hhcCcEEEEcC-ChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhc-CCCCEEEe
Q psy7300 73 MASSDVLISGL-GGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQL-NPYVSTKA 149 (986)
Q Consensus 73 L~~s~VlIiG~-gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~l-Np~V~v~~ 149 (986)
|...||.|+|+ |.+|+.+|..|+..|. .+++|+|-+ ..|++..+.-|+.. .|...+..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-------------------~~k~~g~a~DL~~~~~~~~~i~~ 66 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-------------------AVGLEGVAEEIRHCGFEGLNLTF 66 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-------------------HHHHHHHHHHHHHHCCTTCCCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-------------------chhHHHHHHhhhhCcCCCCceEE
Confidence 45789999997 9999999999999997 589999942 12444433344432 23333332
Q ss_pred ecCCCCHhhhccccEEEEecC
Q psy7300 150 YTGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 150 ~~~~~~~~~l~~~dvVI~~~~ 170 (986)
.. + ..+-+++.|+||.|..
T Consensus 67 t~-d-~~~al~dADvVvitaG 85 (343)
T 3fi9_A 67 TS-D-IKEALTDAKYIVSSGG 85 (343)
T ss_dssp ES-C-HHHHHTTEEEEEECCC
T ss_pred cC-C-HHHHhCCCCEEEEccC
Confidence 21 1 1345789999999864
No 207
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.16 E-value=0.6 Score=50.98 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=63.9
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
++|+|.|+ |+||+.+++.|+..|. +++++|... |. ......+.+.. .+ +++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~~-------~~-----------~~~~~~~~l~~-~~--~~~~ 54 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI------DLIVFDNLS-------RK-----------GATDNLHWLSS-LG--NFEF 54 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCC-------ST-----------THHHHHHHHHT-TC--CCEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC------EEEEEeCCC-------cc-----------Cchhhhhhhcc-CC--ceEE
Confidence 47999995 9999999999999887 888887432 10 01111122222 12 3445
Q ss_pred EEcccCCccccccccccccC--CCEEEEcCCC-----------------HHHHHHHHHHHHHcCCc--EEEEeecCCcc
Q psy7300 542 HENRVGPETEKVYDDLFFES--LDGIANALDN-----------------VEARIYMDRRCVYSRKP--LLESGTLGTKG 599 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~--~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~p--li~~g~~G~~G 599 (986)
+..++.... .+ ...+++ +|+||++... +.+-..+-+.|...++. +|..++.+.+|
T Consensus 55 ~~~Dl~d~~--~~-~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 55 VHGDIRNKN--DV-TRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp EECCTTCHH--HH-HHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred EEcCCCCHH--HH-HHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 555554321 11 244555 8999987542 11223456777777764 88888776554
No 208
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.15 E-value=0.19 Score=53.37 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=31.2
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 43 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA------NVAVAGRS 43 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467888999985 8999999999999998 89998754
No 209
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.12 E-value=0.38 Score=50.74 Aligned_cols=36 Identities=31% Similarity=0.459 Sum_probs=30.6
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 40 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF------TVFAGRRN 40 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 356788999986 7899999999999998 89998854
No 210
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.12 E-value=0.84 Score=49.79 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=30.6
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.||.|+|+|.+|+.++..|+..|.. +.++++|.|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~----~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSC----SELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCCH
Confidence 3799999999999999999999863 6899999763
No 211
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.09 E-value=0.47 Score=52.49 Aligned_cols=35 Identities=23% Similarity=0.439 Sum_probs=30.7
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
...||.|+|+|.+|..++..|+..|. ..++++|.|
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~-----~~V~L~Di~ 47 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDL-----GDVYMFDII 47 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 44689999999999999999999988 369999865
No 212
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.07 E-value=0.49 Score=52.82 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=56.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVIL-SGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl-~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
...+|+|||+|+.|..++..|.. .++.+++++|.+ ..|++.+++.+.+. +.+.+....
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~~- 186 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRAS- 186 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEECS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEeC-
Confidence 46789999999999999999864 588999999853 24777777777553 344454432
Q ss_pred CCCHhhhccccEEEEecCC
Q psy7300 153 ELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~ 171 (986)
+ .++.+.++|+||.|+.+
T Consensus 187 ~-~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 S-VAEAVKGVDIITTVTAD 204 (350)
T ss_dssp S-HHHHHTTCSEEEECCCC
T ss_pred C-HHHHHhcCCEEEEeccC
Confidence 1 24677889999999875
No 213
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=91.07 E-value=0.39 Score=52.94 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=64.4
Q ss_pred hhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 73 MASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 73 L~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
|...+|||.|+ |.+|+.+++.|...| .++++++.+.-. ...|+..+ +.+.. +.+ +.+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---------------~~~~~~~~-~~l~~--~~v--~~~~ 66 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPR---------------SPSKAKIF-KALED--KGA--IIVY 66 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCC---------------CHHHHHHH-HHHHH--TTC--EEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCC---------------ChhHHHHH-HHHHh--CCc--EEEE
Confidence 44679999997 889999999999999 578887754310 01132211 22222 233 3344
Q ss_pred CCCC-H----hhhc--cccEEEEecC--CHHHHHHHHHHHHHcC-CcEEEeeccc
Q psy7300 152 GELS-E----AFIK--KFRVVVLTNS--TYDEQLAISQITHAND-IALIIADTRG 196 (986)
Q Consensus 152 ~~~~-~----~~l~--~~dvVI~~~~--~~~~~~~i~~~c~~~~-ip~I~~~~~G 196 (986)
.+++ . +.++ ++|+||.+.. +......+-+.|++.+ ++.+....+|
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCS
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecccC
Confidence 4442 2 3567 8999998875 4455667888999888 8766544333
No 214
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=91.06 E-value=0.31 Score=51.91 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=62.7
Q ss_pred CcEEEEec-ChhhHHHHHHHHHc--CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMM--GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~--Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
++|+|.|+ |.+|+.+++.|+.. |. ++++++.+. + +... +.. +. +
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~------~V~~~~r~~---~----------------~~~~----l~~--~~--~ 47 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS------QIIAIVRNV---E----------------KAST----LAD--QG--V 47 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG------GEEEEESCT---T----------------TTHH----HHH--TT--C
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC------eEEEEEcCH---H----------------HHhH----Hhh--cC--C
Confidence 47999997 99999999999987 76 788887532 0 1111 111 22 3
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCC-------CHHHHHHHHHHHHHcCC-cEEEEeecC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALD-------NVEARIYMDRRCVYSRK-PLLESGTLG 596 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-------n~~ar~~l~~~c~~~~~-pli~~g~~G 596 (986)
+.+..++.+.. . + ...++++|+||.+.. |...-..+-+.|.+.++ .+|..++.+
T Consensus 48 ~~~~~D~~d~~-~-l-~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 48 EVRHGDYNQPE-S-L-QKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp EEEECCTTCHH-H-H-HHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred eEEEeccCCHH-H-H-HHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 44455554321 1 1 355778999998764 44555567778888776 577777654
No 215
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=91.05 E-value=0.46 Score=50.55 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=31.1
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~r~ 64 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS------KLVLWDIN 64 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEEcC
Confidence 367789999986 8999999999999997 88888754
No 216
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.02 E-value=0.61 Score=50.21 Aligned_cols=37 Identities=30% Similarity=0.432 Sum_probs=29.8
Q ss_pred HhhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 72 RMASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 72 kL~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
.+...+|||.|+ |.+|+.+++.|...|. +++.++...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 456789999997 8899999999999996 788887654
No 217
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.99 E-value=0.4 Score=51.26 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=32.5
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGA------DIILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC------eEEEEccc
Confidence 3578889999996 7999999999999998 89999865
No 218
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.97 E-value=0.45 Score=51.65 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=30.8
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~------~V~~~~r~ 64 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA------RLVLSDVD 64 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 67789999996 8899999999999998 88888754
No 219
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=90.96 E-value=0.39 Score=50.84 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=52.1
Q ss_pred cEEEEec-ChhhHHHHHHHHHc-CCCcCCCCeEE-EEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 464 KYFVVGA-GAIGCELLKNFAMM-GVGAGPGGQIF-VTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 464 ~VlvvGa-GgiG~e~lknLa~~-Gv~~g~~g~i~-ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
||.|+|| |.+|..+++.+... |+ .+. ++|.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~------elva~~d~~---------------------------------------- 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDL------TLSAELDAG---------------------------------------- 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTC------EEEEEECTT----------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEccC----------------------------------------
Confidence 7999998 99999999998765 66 443 55532
Q ss_pred EEEcccCCccccccccccc-cCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCC
Q psy7300 541 YHENRVGPETEKVYDDLFF-ESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGT 597 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~-~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~ 597 (986)
..+ ++++ ...|+||+++ ++++-...-..|.++++|+|-+- .|+
T Consensus 36 ---~dl---------~~~~~~~~DvvIDfT-~p~a~~~~~~~a~~~g~~~VigT-TG~ 79 (245)
T 1p9l_A 36 ---DPL---------SLLTDGNTEVVIDFT-HPDVVMGNLEFLIDNGIHAVVGT-TGF 79 (245)
T ss_dssp ---CCT---------HHHHHTTCCEEEECS-CTTTHHHHHHHHHHTTCEEEECC-CCC
T ss_pred ---CCH---------HHHhccCCcEEEEcc-ChHHHHHHHHHHHHcCCCEEEcC-CCC
Confidence 001 1122 3789999998 55555666789999999987653 343
No 220
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=90.96 E-value=0.3 Score=51.01 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=31.7
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|++++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA------SVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEecC
Confidence 577889999997 8999999999999998 89998754
No 221
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.90 E-value=0.23 Score=52.98 Aligned_cols=36 Identities=28% Similarity=0.474 Sum_probs=32.2
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
+.+ +|+|+|+||.|..++..|+..|+ ++|+|+|.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~-----~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGV-----KDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTC-----CCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCC-----CEEEEEeCCH
Confidence 466 99999999999999999999998 6999998653
No 222
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.89 E-value=0.65 Score=51.00 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=30.6
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..||.|||+|.+|..++..|+..|+. ++|+++|-+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~----~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIA----DEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 36899999999999999999998864 689999854
No 223
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=90.88 E-value=0.85 Score=49.16 Aligned_cols=68 Identities=21% Similarity=0.264 Sum_probs=52.6
Q ss_pred HHHHHhhcCcEEEEc-CChhHHHHHHHHHHhCCC--eEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCC
Q psy7300 68 DAMRRMASSDVLISG-LGGLGVEIAKNVILSGVK--SVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPY 144 (986)
Q Consensus 68 ~~q~kL~~s~VlIiG-~gglGseiaknLvl~GVg--~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~ 144 (986)
..+..|.+++|+|.| .||+|.++|+.|+..|.+ ++.+.|.+ ..+.+.+.+.+.+.++.
T Consensus 26 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~ 86 (287)
T 3rku_A 26 KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFPN 86 (287)
T ss_dssp HHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCTT
T ss_pred cchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCCC
Confidence 345678999999999 689999999999999875 78887753 23566677778777777
Q ss_pred CEEEeecCCC
Q psy7300 145 VSTKAYTGEL 154 (986)
Q Consensus 145 V~v~~~~~~~ 154 (986)
.++..+..++
T Consensus 87 ~~~~~~~~Dv 96 (287)
T 3rku_A 87 AKVHVAQLDI 96 (287)
T ss_dssp CEEEEEECCT
T ss_pred CeEEEEECCC
Confidence 7777766555
No 224
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=90.87 E-value=0.28 Score=54.22 Aligned_cols=37 Identities=16% Similarity=0.297 Sum_probs=32.9
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|...
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~~ 173 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGM------KVLGVSRSG 173 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCC------EEEEEcCCh
Confidence 4678899999999999999999999888 899988654
No 225
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.85 E-value=0.97 Score=47.97 Aligned_cols=96 Identities=8% Similarity=0.073 Sum_probs=62.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
..+|+|.|+|.+|+.+++.|...|. +++.++.+.- ++. .+.. +. ++.+..++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~----~~~~--~~--~~~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPD-------------------QME----AIRA--SG--AEPLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGG-------------------GHH----HHHH--TT--EEEEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChh-------------------hhh----hHhh--CC--CeEEEecc
Confidence 3689999999999999999999996 6777764321 111 1211 22 33333333
Q ss_pred C-HhhhccccEEEEecCC----HHHHHHHHHHHHH--cCC-cEEEeecccceE
Q psy7300 155 S-EAFIKKFRVVVLTNST----YDEQLAISQITHA--NDI-ALIIADTRGLFA 199 (986)
Q Consensus 155 ~-~~~l~~~dvVI~~~~~----~~~~~~i~~~c~~--~~i-p~I~~~~~G~~G 199 (986)
. .+ +.++|+||.+... ......+.+.|++ .++ .||++++.+.||
T Consensus 57 ~d~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EEPS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp SCCC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred cccc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 2 22 7789999987632 1234566677877 454 588888888776
No 226
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.84 E-value=0.44 Score=50.68 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=30.0
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+ +|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~------~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL------EVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 567 99999999999999999999887 78888744
No 227
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=90.83 E-value=0.28 Score=53.87 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=48.6
Q ss_pred HHHHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHh
Q psy7300 454 KNFQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKV 532 (986)
Q Consensus 454 ~~~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~ 532 (986)
+..+..|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+.-. .| ...-...+.+.+.+.+..
T Consensus 19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~------~Vv~~~r~~~~----~~-----~~~~~~~~~~~~~~~~~~ 83 (322)
T 3qlj_A 19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA------RVVVNDIGVGL----DG-----SPASGGSAAQSVVDEITA 83 (322)
T ss_dssp ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEECCCBCT----TS-----SBTCTTSHHHHHHHHHHH
T ss_pred CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCcccc----cc-----cccccHHHHHHHHHHHHh
Confidence 34445678889999986 8999999999999998 89999865311 11 112224556666666665
Q ss_pred hCCCceEEEEEccc
Q psy7300 533 MNPNVNITYHENRV 546 (986)
Q Consensus 533 ~np~~~i~~~~~~v 546 (986)
..+ ++..+..++
T Consensus 84 ~~~--~~~~~~~Dv 95 (322)
T 3qlj_A 84 AGG--EAVADGSNV 95 (322)
T ss_dssp TTC--EEEEECCCT
T ss_pred cCC--cEEEEECCC
Confidence 543 444444444
No 228
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=90.83 E-value=0.61 Score=49.96 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=32.1
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+|.++.++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~------~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA------DIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------eEEEEecc
Confidence 467889999996 7899999999999998 89999865
No 229
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=90.82 E-value=0.51 Score=49.46 Aligned_cols=35 Identities=26% Similarity=0.459 Sum_probs=30.4
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~------~V~~~~r~ 46 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA------RVIIADLD 46 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999986 8999999999999997 89988744
No 230
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=90.81 E-value=0.37 Score=52.05 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=27.9
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+++|+|.|+ |.||..+++.|+..|. +++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW------HAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC------eEEEEcc
Confidence 468999998 9999999999999886 8888874
No 231
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.81 E-value=0.16 Score=54.68 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=29.6
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+++|+|+|+||.|..++..|+..|. +|+|++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~------~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL------QVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 7899999999999999999999984 89998543
No 232
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.77 E-value=0.68 Score=50.89 Aligned_cols=38 Identities=21% Similarity=0.416 Sum_probs=32.0
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+....||.|+|+|.+|..++..|+..|+. ..|.++|-+
T Consensus 3 ~m~~~KI~IIGaG~vG~~la~~l~~~~~~----~ei~L~Di~ 40 (317)
T 3d0o_A 3 KFKGNKVVLIGNGAVGSSYAFSLVNQSIV----DELVIIDLD 40 (317)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSC----SEEEEECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 44567999999999999999999998874 589999854
No 233
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.75 E-value=0.21 Score=53.83 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=30.0
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC------SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC------eEEEEcCCH
Confidence 589999999999999999999997 899998654
No 234
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=90.74 E-value=0.73 Score=48.10 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=52.4
Q ss_pred cEEEEecChhhHHHHHHHHHcCCCcCCCCeE-EEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 464 KYFVVGAGAIGCELLKNFAMMGVGAGPGGQI-FVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 464 ~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i-~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
||.|||+|.+|..++++|...|+ .+ .++|.+. ...+ .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~------~lv~v~d~~~----~~~~-------------------------------~- 39 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGF------EIAAILDVRG----EHEK-------------------------------M- 39 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------EEEEEECSSC----CCTT-------------------------------E-
T ss_pred EEEEECCCHHHHHHHHHHhcCCC------EEEEEEecCc----chhh-------------------------------h-
Confidence 79999999999999999998887 65 6877652 1110 0
Q ss_pred EcccCCccccccccccc-cCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEe
Q psy7300 543 ENRVGPETEKVYDDLFF-ESLDGIANALDNVEARIYMDRRCVYSRKPLLESG 593 (986)
Q Consensus 543 ~~~v~~~~~~~~~~~f~-~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g 593 (986)
.. +. .+++ .+.|+|+.|+-+......+ ..|.+.|+++|...
T Consensus 40 ---~~-~~-----~~l~~~~~DvVv~~~~~~~~~~~~-~~~l~~G~~vv~~~ 81 (236)
T 2dc1_A 40 ---VR-GI-----DEFLQREMDVAVEAASQQAVKDYA-EKILKAGIDLIVLS 81 (236)
T ss_dssp ---ES-SH-----HHHTTSCCSEEEECSCHHHHHHHH-HHHHHTTCEEEESC
T ss_pred ---cC-CH-----HHHhcCCCCEEEECCCHHHHHHHH-HHHHHCCCcEEEEC
Confidence 11 01 2344 6899999998776444443 55667777666543
No 235
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=90.71 E-value=2.7 Score=47.38 Aligned_cols=105 Identities=10% Similarity=0.102 Sum_probs=69.5
Q ss_pred HHhhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCC--CCEE
Q psy7300 71 RRMASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNP--YVST 147 (986)
Q Consensus 71 ~kL~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp--~V~v 147 (986)
..++..+|||.| .|++|+++++.|+..|...++++|.. ..+.....+.|.+..+ ...+
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~v 91 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS-------------------ENNMVELVRDIRSSFGYINGDF 91 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHHTCCCSSEE
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC-------------------cchHHHHHHHHHHhcCCCCCcE
Confidence 447789999999 58899999999999998889998852 2234445555655544 2466
Q ss_pred EeecCCCC-Hh----hh--ccccEEEEecCC--------HH-----------HHHHHHHHHHHcCCc-EEEeec
Q psy7300 148 KAYTGELS-EA----FI--KKFRVVVLTNST--------YD-----------EQLAISQITHANDIA-LIIADT 194 (986)
Q Consensus 148 ~~~~~~~~-~~----~l--~~~dvVI~~~~~--------~~-----------~~~~i~~~c~~~~ip-~I~~~~ 194 (986)
..+..++. .+ ++ .+.|+||.+... .. ....+.+.|++.+++ ||..++
T Consensus 92 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS 165 (399)
T 3nzo_A 92 QTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVST 165 (399)
T ss_dssp EEECCCTTSHHHHHHHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EEEEEeCCCHHHHHHHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 77766663 22 22 478999976431 10 112466778888763 555554
No 236
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.67 E-value=0.21 Score=52.92 Aligned_cols=63 Identities=19% Similarity=0.311 Sum_probs=44.5
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN 536 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~ 536 (986)
..+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+. .+.+.+.+.+....+
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~- 78 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGA------RVVLTARDV-------------------EKLRAVEREIVAAGG- 78 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTC-
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHHhCC-
Confidence 3467889999996 8999999999999998 888887542 344455555555443
Q ss_pred ceEEEEEcccC
Q psy7300 537 VNITYHENRVG 547 (986)
Q Consensus 537 ~~i~~~~~~v~ 547 (986)
++..+..++.
T Consensus 79 -~~~~~~~D~~ 88 (262)
T 3rkr_A 79 -EAESHACDLS 88 (262)
T ss_dssp -EEEEEECCTT
T ss_pred -ceeEEEecCC
Confidence 4555555554
No 237
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=90.66 E-value=1.1 Score=48.84 Aligned_cols=110 Identities=17% Similarity=0.273 Sum_probs=66.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
++|.+||+|..|..+|+||+.+|. .++++|.+.-....+.. .|-..+....+..+ ..++-+........
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~--------~Ga~~a~s~~e~~~--~~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVA--------AGASAARSARDAVQ--GADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH--------TTCEECSSHHHHHT--TCSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHH--------cCCEEcCCHHHHHh--cCCceeecCCchHH
Confidence 479999999999999999999997 68898864321111110 11111111111111 22334433332210
Q ss_pred -Hhh----------hccccEEEEec-CCHHHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 156 -EAF----------IKKFRVVVLTN-STYDEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 156 -~~~----------l~~~dvVI~~~-~~~~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
++. ++.-++||+++ .+++...++.+.+.++|+.|+.+-+.|
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsG 125 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSG 125 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence 111 22346788765 567788899999999999999988777
No 238
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.65 E-value=0.67 Score=50.82 Aligned_cols=34 Identities=26% Similarity=0.330 Sum_probs=30.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
..+|.|+|+|.+|+.+|..|+..|...++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3589999999999999999999998679999965
No 239
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=90.63 E-value=0.57 Score=50.08 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=32.9
Q ss_pred HHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 456 FQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 456 ~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+..|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~------~V~~~~r~ 43 (281)
T 3s55_A 4 SMADFEGKTALITGGARGMGRSHAVALAEAGA------DIAICDRC 43 (281)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCC------eEEEEeCC
Confidence 345678899999985 8999999999999998 89999865
No 240
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=90.62 E-value=1.1 Score=49.25 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=32.1
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..+.+++|+|.|+ |.||+.+++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA------TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEeCC
Confidence 4577889999996 9999999999999987 89988864
No 241
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.62 E-value=0.96 Score=49.71 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=66.3
Q ss_pred hhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhc-CCCCEEEee
Q psy7300 73 MASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQL-NPYVSTKAY 150 (986)
Q Consensus 73 L~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~l-Np~V~v~~~ 150 (986)
+...+|||.|+ |++|+.+++.|+..|. +++++|...-. ...+.+.+.+.+... .+. ++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~~ 86 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWSN--FKFI 86 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHTT--EEEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc---------------chhhHHHHhhhcccccCCc--eEEE
Confidence 56678999996 8999999999999995 78888753210 011222222222211 123 3444
Q ss_pred cCCCC-H----hhhccccEEEEecCC---------HH--------HHHHHHHHHHHcCCc-EEEeecccceE
Q psy7300 151 TGELS-E----AFIKKFRVVVLTNST---------YD--------EQLAISQITHANDIA-LIIADTRGLFA 199 (986)
Q Consensus 151 ~~~~~-~----~~l~~~dvVI~~~~~---------~~--------~~~~i~~~c~~~~ip-~I~~~~~G~~G 199 (986)
..++. . +.++++|+||.+... .. ....+.+.|++.+++ ||++++.+.+|
T Consensus 87 ~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 87 QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp ECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred ECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 44542 2 356789999987542 11 113455778887764 88887777654
No 242
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=90.61 E-value=0.47 Score=50.88 Aligned_cols=36 Identities=36% Similarity=0.453 Sum_probs=31.4
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~------~V~~~~r~ 61 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA------HVVVTARS 61 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 467889999997 8999999999999997 88888754
No 243
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.60 E-value=0.46 Score=50.14 Aligned_cols=36 Identities=33% Similarity=0.515 Sum_probs=31.1
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 45 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA------SVVVTDLK 45 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTC------EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 367788999986 8999999999999998 89988754
No 244
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=90.60 E-value=0.38 Score=50.21 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=29.8
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~r 43 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA------SVVVSDI 43 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC------EEEEEES
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEcC
Confidence 56788999986 8999999999999987 8888874
No 245
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=90.58 E-value=0.72 Score=50.43 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=29.2
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcC-------CCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMG-------VGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~G-------v~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ |+||+.+++.|+..| . +++++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~------~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVE------KFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEE------EEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCc------eEEEEEcc
Confidence 45678999995 999999999999988 4 78888754
No 246
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.56 E-value=0.71 Score=50.62 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=30.8
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
..||.|+|+|.+|+.++..|+..|+ ..++++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~-----~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL-----ADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCCc
Confidence 3689999999999999999999997 4799998653
No 247
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=90.55 E-value=0.61 Score=48.88 Aligned_cols=84 Identities=26% Similarity=0.338 Sum_probs=53.4
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
|.+++|+|.|+ ||||.++++.|+..|. ..+.++|.+. .+ ...+.+.+..+..+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~-----~~v~~~~r~~-------------------~~--~~~~~l~~~~~~~~ 56 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL-----KNFVILDRVE-------------------NP--TALAELKAINPKVN 56 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC-----SEEEEEESSC-------------------CH--HHHHHHHHHCTTSE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-----cEEEEEecCc-------------------hH--HHHHHHHHhCCCce
Confidence 46788999986 8999999999999997 3488887432 01 12234445555667
Q ss_pred EEEEEcccCCc-cc--cccc--cccccCCCEEEEcC
Q psy7300 539 ITYHENRVGPE-TE--KVYD--DLFFESLDGIANAL 569 (986)
Q Consensus 539 i~~~~~~v~~~-~~--~~~~--~~f~~~~DvVi~a~ 569 (986)
+..+..++.+. .. ..+. .+-+.+.|+||++.
T Consensus 57 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~A 92 (254)
T 1sby_A 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92 (254)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECC
Confidence 77777777643 11 0110 11234789888864
No 248
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=90.54 E-value=0.46 Score=50.64 Aligned_cols=35 Identities=20% Similarity=0.415 Sum_probs=29.7
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 37 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA------KILLGARR 37 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 35678889986 7999999999999998 89888754
No 249
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.52 E-value=0.91 Score=49.91 Aligned_cols=73 Identities=19% Similarity=0.284 Sum_probs=52.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC---CCCEEEeec
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN---PYVSTKAYT 151 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN---p~V~v~~~~ 151 (986)
.||.|+|+|.+|..++..|+..|. .+|.|+|-+ ..|++..+..|.+.. +.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV-------------------KDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999999885 578898842 235554444454433 4555654
Q ss_pred CCCCHhhhccccEEEEecCC
Q psy7300 152 GELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~~ 171 (986)
+ +.+-+++.|+||.+...
T Consensus 65 ~--~~~a~~~aDvVii~ag~ 82 (318)
T 1ez4_A 65 G--EYSDCKDADLVVITAGA 82 (318)
T ss_dssp C--CGGGGTTCSEEEECCCC
T ss_pred C--CHHHhCCCCEEEECCCC
Confidence 2 24558899999998753
No 250
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=90.51 E-value=0.46 Score=50.87 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=31.4
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 65 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA------QVAVAARH 65 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467889999996 8999999999999998 89998754
No 251
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=90.50 E-value=0.76 Score=47.49 Aligned_cols=35 Identities=17% Similarity=0.019 Sum_probs=29.2
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHc--CCCcCCCCeEEEEeCCc
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMM--GVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~--Gv~~g~~g~i~ivD~D~ 501 (986)
..++|+|.|+ |+||.++++.|+.. |. ++++++.+.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~------~V~~~~r~~ 40 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF------VAKGLVRSA 40 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC------EEEEEESCH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc------EEEEEEcCC
Confidence 3578999995 99999999999998 55 888887653
No 252
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.48 E-value=0.8 Score=49.98 Aligned_cols=71 Identities=23% Similarity=0.313 Sum_probs=49.4
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC---CCCEEEeecC
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN---PYVSTKAYTG 152 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN---p~V~v~~~~~ 152 (986)
||.|+|+|.+|+.+|..|+..|. ++++|+|.+. .|++.....+...+ +.+++.. .
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE-------------------DRAQAEAEDIAHAAPVSHGTRVWH--G 60 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHTTSCCTTSCCEEEE--E
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH-------------------HHHHHHHHhhhhhhhhcCCeEEEE--C
Confidence 79999999999999999999985 5799999642 13333333444433 3445553 2
Q ss_pred CCCHhhhccccEEEEecC
Q psy7300 153 ELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~ 170 (986)
+.+-+++.|+||.+..
T Consensus 61 --~~~a~~~aDvVIi~~~ 76 (304)
T 2v6b_A 61 --GHSELADAQVVILTAG 76 (304)
T ss_dssp --CGGGGTTCSEEEECC-
T ss_pred --CHHHhCCCCEEEEcCC
Confidence 2345789999999974
No 253
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=90.39 E-value=0.76 Score=48.94 Aligned_cols=75 Identities=17% Similarity=0.141 Sum_probs=47.3
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
.|.+++|+|.|+ ||||.++++.|+..|. +++++|.+.-. ..+.. ..-...+.+.+.+.+....+
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~-- 74 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGA------DIIAVDLCDQI-ASVPY------PLATPEELAATVKLVEDIGS-- 74 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCC-TTCSS------CCCCHHHHHHHHHHHHHHTC--
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC------eEEEEeccccc-ccccc------cccchHHHHHHHHHHHhcCC--
Confidence 578889999996 8999999999999998 89999865210 00000 00112344444555555544
Q ss_pred eEEEEEcccCC
Q psy7300 538 NITYHENRVGP 548 (986)
Q Consensus 538 ~i~~~~~~v~~ 548 (986)
++..+..++.+
T Consensus 75 ~~~~~~~D~~~ 85 (278)
T 3sx2_A 75 RIVARQADVRD 85 (278)
T ss_dssp CEEEEECCTTC
T ss_pred eEEEEeCCCCC
Confidence 45666666653
No 254
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=90.39 E-value=0.84 Score=49.96 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=48.9
Q ss_pred cEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHh----hCCCceE
Q psy7300 464 KYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKV----MNPNVNI 539 (986)
Q Consensus 464 ~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~----~np~~~i 539 (986)
||.|+|+|.+|..++-.|+..|+ ++|+++|-|. .|++..+..+.. .+..++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-----~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i 56 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-----DDLLLIARTP-------------------GKPQGEALDLAHAAAELGVDIRI 56 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-----SCEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCE
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-----CEEEEEcCCh-------------------hhHHHHHHHHHHhhhhcCCCeEE
Confidence 68999999999999999998887 5899998652 222222222222 4456666
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
.+... .+-+.++|+||.+..
T Consensus 57 ~~t~d-----------~~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 57 SGSNS-----------YEDMRGSDIVLVTAG 76 (308)
T ss_dssp EEESC-----------GGGGTTCSEEEECCS
T ss_pred EECCC-----------HHHhCCCCEEEEeCC
Confidence 65311 124689999999854
No 255
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=90.37 E-value=0.73 Score=49.49 Aligned_cols=69 Identities=20% Similarity=0.181 Sum_probs=46.7
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
|.+++++|.|+ ||||.++++.|+..|. ++.++|.+.-....+. .+.+.+++.+....+ +
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~~--~ 66 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA------NVALVAKSAEPHPKLP------------GTIYTAAKEIEEAGG--Q 66 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC------EEEEEESCCSCCSSSC------------CCHHHHHHHHHHHTS--E
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECChhhhhhhh------------HHHHHHHHHHHhcCC--c
Confidence 67788999996 8999999999999998 8999987643322221 133444555555543 5
Q ss_pred EEEEEcccCC
Q psy7300 539 ITYHENRVGP 548 (986)
Q Consensus 539 i~~~~~~v~~ 548 (986)
+..+..++.+
T Consensus 67 ~~~~~~Dv~~ 76 (285)
T 3sc4_A 67 ALPIVGDIRD 76 (285)
T ss_dssp EEEEECCTTS
T ss_pred EEEEECCCCC
Confidence 6666666653
No 256
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=90.36 E-value=0.61 Score=48.87 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=30.3
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 40 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA------AVAIAARR 40 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 56788999986 8999999999999998 88888743
No 257
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.36 E-value=0.65 Score=49.96 Aligned_cols=33 Identities=33% Similarity=0.452 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
-.+|.|||+|.+|+.+|..|+.+|. +++++|.+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3689999999999999999999998 79999864
No 258
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.36 E-value=0.49 Score=51.41 Aligned_cols=32 Identities=28% Similarity=0.477 Sum_probs=29.1
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 76 SDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 76 s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d 108 (986)
.+|.||| +|.+|..+++.|...|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 78899864
No 259
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.34 E-value=0.23 Score=57.72 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=29.5
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
.+..++|+|+|+|++|..++..|+..|--+++++|.+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4556789999999999999999999843479998864
No 260
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=90.33 E-value=0.61 Score=51.06 Aligned_cols=114 Identities=14% Similarity=0.097 Sum_probs=64.5
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHh-hCCCceE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKV-MNPNVNI 539 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~-~np~~~i 539 (986)
+++|+|.|+ |+||+++++.|+..|. +++++|...-...+.. -... ..+.+.. ..+ ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~r~~~---------~~~~----~~~~l~~~~~~--~~ 60 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY------LPVVIDNFHNAFRGGG---------SLPE----SLRRVQELTGR--SV 60 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC------CEEEEECSSSSCBCSS---------SSBH----HHHHHHHHHTC--CC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEecCCccccccc---------ccHH----HHHHHHhccCC--ce
Confidence 468999986 9999999999999987 8888875421100000 0001 1122222 222 34
Q ss_pred EEEEcccCCcccccccccccc--CCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 540 TYHENRVGPETEKVYDDLFFE--SLDGIANALDN-----------------VEARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~--~~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
+.+..++..... + ..+++ ++|+||++... ..+-..+-+.|.+.++ .+|..++.+.+|
T Consensus 61 ~~~~~D~~~~~~--~-~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 61 EFEEMDILDQGA--L-QRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (348)
T ss_dssp EEEECCTTCHHH--H-HHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred EEEECCCCCHHH--H-HHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 455555543211 1 23444 78999987542 1222345566777775 477777765544
No 261
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=90.33 E-value=0.74 Score=49.69 Aligned_cols=98 Identities=14% Similarity=0.164 Sum_probs=57.1
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC-CccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM-DLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~-D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
++|+|.|+ |+||.++++.|+..| .+++++. +.-....+ .+ .++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-------~~v~~~~~~~~~~~~~--------------------------~~--~~~ 46 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-------EIVVIDNLSSGNEEFV--------------------------NE--AAR 46 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-------CEEEECCCSSCCGGGS--------------------------CT--TEE
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-------CEEEEEcCCCCChhhc--------------------------CC--CcE
Confidence 47999997 899999999999765 3444432 11100000 11 244
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALD-----------------NVEARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-----------------n~~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
.+..++.+ +.. .+.+.++|+|+.+.. |+.+-..+-+.|.+.++ .+|..++.+.+|
T Consensus 47 ~~~~Dl~~--~~~--~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg 119 (313)
T 3ehe_A 47 LVKADLAA--DDI--KDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYG 119 (313)
T ss_dssp EECCCTTT--SCC--HHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGC
T ss_pred EEECcCCh--HHH--HHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhC
Confidence 45555543 111 456678999987643 22223345566777775 588877766554
No 262
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.32 E-value=1.1 Score=49.04 Aligned_cols=82 Identities=20% Similarity=0.148 Sum_probs=52.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVK-SVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg-~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
..+|.|||+|.+|..+|+.|...|.. .++++|.+. .+++. +.++.-... . ..+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~-------------------~~~~~----a~~~G~~~~--~-~~~ 86 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISK----AVDLGIIDE--G-TTS 86 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHH----HHHTTSCSE--E-ESC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH-------------------HHHHH----HHHCCCcch--h-cCC
Confidence 36899999999999999999999974 788888532 12221 222221001 1 122
Q ss_pred CCHh-hhccccEEEEecCCHHHHHHHHHHHH
Q psy7300 154 LSEA-FIKKFRVVVLTNSTYDEQLAISQITH 183 (986)
Q Consensus 154 ~~~~-~l~~~dvVI~~~~~~~~~~~i~~~c~ 183 (986)
+ ++ .+.++|+||.|.........+.++..
T Consensus 87 ~-~~~~~~~aDvVilavp~~~~~~vl~~l~~ 116 (314)
T 3ggo_A 87 I-AKVEDFSPDFVMLSSPVRTFREIAKKLSY 116 (314)
T ss_dssp T-TGGGGGCCSEEEECSCGGGHHHHHHHHHH
T ss_pred H-HHHhhccCCEEEEeCCHHHHHHHHHHHhh
Confidence 2 34 67899999999866544444444443
No 263
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=90.31 E-value=0.56 Score=48.94 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=30.7
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~------~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGA------KVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEECCC
Confidence 366788999986 8999999999999997 88888754
No 264
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=90.29 E-value=0.73 Score=48.58 Aligned_cols=35 Identities=20% Similarity=0.457 Sum_probs=30.3
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r~ 42 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA------SVYTCSRN 42 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999986 7999999999999997 88888754
No 265
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.29 E-value=0.35 Score=53.45 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=50.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhc---CCCCEEEee
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQL---NPYVSTKAY 150 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~l---Np~V~v~~~ 150 (986)
..+|.|+|+|.+|+.+|..|+..|+ ++++|+|-+. .|++..+.-|+.. .+...+...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~-------------------~~~~g~a~DL~~~~~~~~~~~i~~t 81 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME-------------------DKLKGEMMDLEHGSLFLHTAKIVSG 81 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH-------------------HHHHHHHHHHHHHGGGSCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH-------------------HHHHHHHHHhhhhhhcccCCeEEEc
Confidence 4689999999999999999999998 6899999521 2333333333332 224455433
Q ss_pred cCCCCHhhhccccEEEEec
Q psy7300 151 TGELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 151 ~~~~~~~~l~~~dvVI~~~ 169 (986)
.+.. + +++.|+||.+.
T Consensus 82 -~d~~-~-~~daDiVIita 97 (330)
T 3ldh_A 82 -KDYS-V-SAGSKLVVITA 97 (330)
T ss_dssp -SSSC-S-CSSCSEEEECC
T ss_pred -CCHH-H-hCCCCEEEEeC
Confidence 2333 3 88999999874
No 266
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=90.26 E-value=0.51 Score=49.54 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=30.4
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
.|.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA------KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEcC
Confidence 467788999985 8999999999999997 8888875
No 267
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.25 E-value=0.63 Score=49.32 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=31.2
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 44 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA------DLVLAART 44 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC------EEEEEeCC
Confidence 467888999996 7899999999999998 89988753
No 268
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=90.24 E-value=0.33 Score=51.75 Aligned_cols=43 Identities=28% Similarity=0.307 Sum_probs=33.2
Q ss_pred cCHHHHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 452 FGKNFQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 452 ~G~~~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+|+.....|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 17 ~g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~------~V~~~~r~ 60 (266)
T 3grp_A 17 QGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGA------IVGLHGTR 60 (266)
T ss_dssp ----CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 3444445688899999986 8899999999999998 88888753
No 269
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.22 E-value=0.99 Score=45.89 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=27.4
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q psy7300 77 DVLISG-LGGLGVEIAKNVILSGVKSVTLHDT 107 (986)
Q Consensus 77 ~VlIiG-~gglGseiaknLvl~GVg~itlvD~ 107 (986)
+|+|+| +|.+|+.+++.|...|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 699999 99999999999999996 7888885
No 270
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=90.16 E-value=0.6 Score=49.37 Aligned_cols=36 Identities=33% Similarity=0.426 Sum_probs=30.8
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT------AIALLDMN 40 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 367788999986 8999999999999998 88888744
No 271
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.14 E-value=0.41 Score=55.80 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=31.2
Q ss_pred HHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 458 EKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 458 ~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
..+.+++|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~------~V~v~~r~~ 48 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGY------TVSIFNRSR 48 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTC------CEEEECSSH
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCC------eEEEEeCCH
Confidence 45778899999999999999999999998 899998653
No 272
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=90.11 E-value=0.81 Score=49.89 Aligned_cols=118 Identities=14% Similarity=0.146 Sum_probs=67.7
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
+||.+||+|..|..+++||+..|. .++++|.+.=....|. +.|-.-+...++.++ ..++-+...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~------~v~v~dr~~~~~~~l~--------~~Ga~~a~s~~e~~~--~~dvv~~~l 67 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDLVQSAVDGLV--------AAGASAARSARDAVQ--GADVVISML 67 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECSSHHHHHHHH--------HTTCEECSSHHHHHT--TCSEEEECC
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC------eEEEEcCCHHHHHHHH--------HcCCEEcCCHHHHHh--cCCceeecC
Confidence 479999999999999999999998 8999875431111111 112111222222222 122223222
Q ss_pred EcccCCcccccc-c----cccccCCCEEEEc-CCCHHHHHHHHHHHHHcCCcEEEEeecCCc
Q psy7300 543 ENRVGPETEKVY-D----DLFFESLDGIANA-LDNVEARIYMDRRCVYSRKPLLESGTLGTK 598 (986)
Q Consensus 543 ~~~v~~~~~~~~-~----~~f~~~~DvVi~a-~Dn~~ar~~l~~~c~~~~~pli~~g~~G~~ 598 (986)
... +..+.++ . ......-++||++ +-+++.-+.+.+.+...|+-++|+.+.|..
T Consensus 68 ~~~--~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~ 127 (300)
T 3obb_A 68 PAS--QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGT 127 (300)
T ss_dssp SCH--HHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCH
T ss_pred Cch--HHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCH
Confidence 211 0001111 0 1122334677775 445777788889999999999999888753
No 273
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=90.09 E-value=0.62 Score=49.86 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=33.4
Q ss_pred HHHHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 455 NFQEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 455 ~~q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
...-.|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 66 (275)
T 4imr_A 26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA------HVILHGVK 66 (275)
T ss_dssp HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 3445678889999986 8999999999999998 89888753
No 274
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.07 E-value=0.54 Score=50.39 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=28.4
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
-+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI------AVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 356788999996 8999999999999998 88888754
No 275
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=90.07 E-value=0.62 Score=49.53 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=28.5
Q ss_pred HHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 457 QEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 457 q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+.++.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 6 ~~~~~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~r 43 (276)
T 1mxh_A 6 HEASECPAAVITGGARRIGHSIAVRLHQQGF------RVVVHYR 43 (276)
T ss_dssp -----CCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 34567788999886 8999999999999997 8988875
No 276
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=90.07 E-value=0.63 Score=49.12 Aligned_cols=36 Identities=19% Similarity=0.442 Sum_probs=31.4
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA------TVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467888999986 8999999999999998 89998754
No 277
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=90.06 E-value=0.65 Score=49.18 Aligned_cols=36 Identities=25% Similarity=0.472 Sum_probs=30.8
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r~ 49 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGA------KVVIADIA 49 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 367788999996 8999999999999997 88888753
No 278
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.03 E-value=0.93 Score=49.91 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=49.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHh----hcCCCCEEEeec
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLS----QLNPYVSTKAYT 151 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~----~lNp~V~v~~~~ 151 (986)
.+|.|+|+|.+|+.++..|+..|...++|+|-+. .|++.....+. .+....++....
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~t~ 65 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK-------------------NMPHGKALDTSHTNVMAYSNCKVSGSN 65 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTHHHHHTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHHHhhhhhcCCCcEEEECC
Confidence 5899999999999999999999995599999542 12222222222 233345555433
Q ss_pred CCCCHhhhccccEEEEec
Q psy7300 152 GELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~ 169 (986)
+ . +-+++.|+||.+.
T Consensus 66 d-~--~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 66 T-Y--DDLAGADVVIVTA 80 (322)
T ss_dssp C-G--GGGTTCSEEEECC
T ss_pred C-H--HHhCCCCEEEEeC
Confidence 2 2 4578999999986
No 279
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=90.02 E-value=0.54 Score=50.69 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=31.3
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r~ 51 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS------NVVIASRK 51 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 577889999986 8999999999999997 88888753
No 280
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=89.99 E-value=0.63 Score=51.33 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=27.9
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..+.+++|+|.|+ |.||+.+++.|+..|. -+++++|..
T Consensus 42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-----~~V~~~~r~ 80 (357)
T 2x6t_A 42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGI-----TDILVVDNL 80 (357)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTC-----CCEEEEECC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCC-----cEEEEEecC
Confidence 4466789999998 9999999999999983 278888754
No 281
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=89.94 E-value=0.84 Score=48.66 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=31.5
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
|.+++++|.|+ ||||.++++.|+..|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA------NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC------EEEEEeccc
Confidence 56788999996 8999999999999998 899998654
No 282
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=89.94 E-value=0.34 Score=51.15 Aligned_cols=36 Identities=17% Similarity=0.359 Sum_probs=31.1
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|++++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA------RVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467888999986 8999999999999998 88888754
No 283
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=89.93 E-value=1.7 Score=48.03 Aligned_cols=112 Identities=14% Similarity=0.249 Sum_probs=64.4
Q ss_pred hhcCcEEEEc-CChhHHHHHHHHHH--hCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEe
Q psy7300 73 MASSDVLISG-LGGLGVEIAKNVIL--SGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKA 149 (986)
Q Consensus 73 L~~s~VlIiG-~gglGseiaknLvl--~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~ 149 (986)
|...+|||.| .|++|+++++.|+. .|. +++++|...-...-..+ ..+.++. ...+. ...+..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~----~~~~~~~---------~~~~~-~~~~~~ 72 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNN----RPSSLGH---------FKNLI-GFKGEV 72 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-----------CCCCCC---------GGGGT-TCCSEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCcccccccc----chhhhhh---------hhhcc-ccCceE
Confidence 5678999997 68999999999999 776 68888753321000000 0000111 01111 112333
Q ss_pred ecCCCC-H----hh-hccccEEEEecC-------CHH--------HHHHHHHHHHHcCCcEEEeecccceE
Q psy7300 150 YTGELS-E----AF-IKKFRVVVLTNS-------TYD--------EQLAISQITHANDIALIIADTRGLFA 199 (986)
Q Consensus 150 ~~~~~~-~----~~-l~~~dvVI~~~~-------~~~--------~~~~i~~~c~~~~ip~I~~~~~G~~G 199 (986)
+..++. . ++ ..++|+||.+.. +.. ....+.+.|++.+++||++++.+.+|
T Consensus 73 ~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg 143 (362)
T 3sxp_A 73 IAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYG 143 (362)
T ss_dssp EECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGC
T ss_pred EECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhC
Confidence 344442 1 22 467888887642 111 22356678888888899999888766
No 284
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.90 E-value=0.21 Score=50.97 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=29.5
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..|+|||+|..|..+|..|++.|+ +++|+|..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~------~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH------QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC------CEEEEECC
Confidence 469999999999999999999999 89999953
No 285
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=89.90 E-value=1.7 Score=48.02 Aligned_cols=99 Identities=13% Similarity=0.236 Sum_probs=63.3
Q ss_pred hhcCcEEEEc-CChhHHHHHHHHHHh-CCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee
Q psy7300 73 MASSDVLISG-LGGLGVEIAKNVILS-GVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY 150 (986)
Q Consensus 73 L~~s~VlIiG-~gglGseiaknLvl~-GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~ 150 (986)
|++++|||.| .|++|+++++.|+.. |..++++++.+. .+...+.+.+. . ..+..+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~-------------------~~~~~~~~~~~--~--~~v~~~ 75 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE-------------------LKQSEMAMEFN--D--PRMRFF 75 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH-------------------HHHHHHHHHHC--C--TTEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh-------------------hhHHHHHHHhc--C--CCEEEE
Confidence 4568899999 599999999999999 988899988532 23333333332 1 234455
Q ss_pred cCCCC-H----hhhccccEEEEecCCH---------HH--------HHHHHHHHHHcCCc-EEEeec
Q psy7300 151 TGELS-E----AFIKKFRVVVLTNSTY---------DE--------QLAISQITHANDIA-LIIADT 194 (986)
Q Consensus 151 ~~~~~-~----~~l~~~dvVI~~~~~~---------~~--------~~~i~~~c~~~~ip-~I~~~~ 194 (986)
..++. . +.++++|+||.+.... .. ...+.+.|++.+++ +|..++
T Consensus 76 ~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 76 IGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp ECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 55552 2 3567899999875311 11 13455677777764 555554
No 286
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=89.89 E-value=0.48 Score=49.95 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=30.9
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA------HVVVSSRK 47 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788999986 8999999999999997 88888754
No 287
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.89 E-value=1.1 Score=49.08 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=29.1
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.||.|+|+|.+|+.++..|+..|.+ .+++++|.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g----~~V~l~D~~ 34 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLA----RELVLLDVV 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 3799999999999999999987553 489999865
No 288
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=89.88 E-value=1.9 Score=44.46 Aligned_cols=38 Identities=32% Similarity=0.444 Sum_probs=32.2
Q ss_pred HhhcCcEEEEc-CChhHHHHHHHHHHhCCC-eEEEEeCCC
Q psy7300 72 RMASSDVLISG-LGGLGVEIAKNVILSGVK-SVTLHDTTA 109 (986)
Q Consensus 72 kL~~s~VlIiG-~gglGseiaknLvl~GVg-~itlvD~d~ 109 (986)
.|...+|+|.| .|++|.++++.|+..|.. ++++++.+.
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 36678999999 699999999999999974 788888643
No 289
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.85 E-value=1 Score=49.48 Aligned_cols=74 Identities=18% Similarity=0.204 Sum_probs=50.8
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHh---hCCCceE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKV---MNPNVNI 539 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~---~np~~~i 539 (986)
.||.|+|+|.+|..++-.|+..|.. .+|.++|-|. .|++..+.-+.. +.+.+++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~v 62 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIA----EEFVIVDVVK-------------------DRTKGDALDLEDAQAFTAPKKI 62 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSSH-------------------HHHHHHHHHHHGGGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCCc-------------------hHHHHHHHHHHHHHHhcCCeEE
Confidence 6899999999999999999999874 6899998532 344433333333 2244555
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDN 571 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn 571 (986)
.+ +. .+-+.++|+||.+..-
T Consensus 63 ~~-----~~-------~~a~~~aDvVii~ag~ 82 (318)
T 1ez4_A 63 YS-----GE-------YSDCKDADLVVITAGA 82 (318)
T ss_dssp EE-----CC-------GGGGTTCSEEEECCCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCCC
Confidence 53 11 2347899999999653
No 290
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.83 E-value=0.49 Score=51.87 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=51.3
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILS-GVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~-GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
....+|.|||+|..|..++++|... |+.+++++|.+. .|++.+.+.+.. .+....
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~-------------------~~~~~l~~~~~~-----~~~~~~ 188 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTK-------------------ENAEKFADTVQG-----EVRVCS 188 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSH-------------------HHHHHHHHHSSS-----CCEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCH-------------------HHHHHHHHHhhC-----CeEEeC
Confidence 4567899999999999999999988 988999998522 245544444321 122211
Q ss_pred CCCCHhhhccccEEEEecCC
Q psy7300 152 GELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~~ 171 (986)
+ .++.+++.|+||.|+..
T Consensus 189 -~-~~e~v~~aDiVi~atp~ 206 (312)
T 2i99_A 189 -S-VQEAVAGADVIITVTLA 206 (312)
T ss_dssp -S-HHHHHTTCSEEEECCCC
T ss_pred -C-HHHHHhcCCEEEEEeCC
Confidence 1 24677889999999853
No 291
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=89.81 E-value=0.62 Score=49.16 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=30.1
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA------HIVLVARQ 40 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEcCC
Confidence 46778999986 8999999999999997 88888754
No 292
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.81 E-value=0.26 Score=53.29 Aligned_cols=74 Identities=14% Similarity=0.235 Sum_probs=49.3
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC--C-CCEEEe
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN--P-YVSTKA 149 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN--p-~V~v~~ 149 (986)
++.++|+|+|+||+|..+++.|+..| +++++|.+. .|++.+++.+.... . .+.+..
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~~-------------------~~~~~l~~~~~~~~~~~~~~~~d~ 184 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTV-------------------EKAEALAKEIAEKLNKKFGEEVKF 184 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSH-------------------HHHHHHHHHHHHHHTCCHHHHEEE
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECCH-------------------HHHHHHHHHHhhhcccccceeEEE
Confidence 56789999999999999999999999 999987532 25555555554321 0 012222
Q ss_pred ecCCCCHhhhccccEEEEecC
Q psy7300 150 YTGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 150 ~~~~~~~~~l~~~dvVI~~~~ 170 (986)
.. + .+.+.++|+||.+..
T Consensus 185 ~~--~-~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 185 SG--L-DVDLDGVDIIINATP 202 (287)
T ss_dssp EC--T-TCCCTTCCEEEECSC
T ss_pred ee--H-HHhhCCCCEEEECCC
Confidence 11 1 344567888888764
No 293
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.80 E-value=0.44 Score=50.62 Aligned_cols=36 Identities=25% Similarity=0.565 Sum_probs=31.2
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 53 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA------RLVLSGRD 53 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788999986 8999999999999998 89998754
No 294
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=89.79 E-value=0.43 Score=50.56 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=29.9
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA------KVALVDWN 40 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC------EEEEEECC
Confidence 45678999986 8999999999999997 88888754
No 295
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.73 E-value=1.1 Score=49.59 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=52.3
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC---CCCEEEe
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN---PYVSTKA 149 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN---p~V~v~~ 149 (986)
...||.|+|+|.+|..++..|+..|. .+|.|+|-+ ..|++..+..|.+.. ..+++..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~i~~ 68 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLSNALPFTSPKKIYS 68 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHhHHHHHHHHHHHHhcCCeEEEE
Confidence 34689999999999999999998885 568888842 235544444444432 4555654
Q ss_pred ecCCCCHhhhccccEEEEecC
Q psy7300 150 YTGELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 150 ~~~~~~~~~l~~~dvVI~~~~ 170 (986)
+ +.+-+++.|+||.+..
T Consensus 69 --~--~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 69 --A--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --C--CGGGGGGCSEEEECCC
T ss_pred --C--CHHHhCCCCEEEEcCC
Confidence 2 2455889999999874
No 296
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.73 E-value=1.1 Score=45.64 Aligned_cols=93 Identities=19% Similarity=0.163 Sum_probs=59.6
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC-
Q psy7300 77 DVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL- 154 (986)
Q Consensus 77 ~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~- 154 (986)
+|+|.|+ |++|+++++.|+..|. ++++++.+.- +.. .+ ..+.+++ +..++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~~----~~--~~~~~~~--~~~D~~ 53 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQ-------------------KAA----DR--LGATVAT--LVKEPL 53 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHH----HH--TCTTSEE--EECCGG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccc-------------------ccc----cc--cCCCceE--Eecccc
Confidence 6999996 8999999999999995 7888774321 111 11 1123333 33333
Q ss_pred --CHhhhccccEEEEecCC----------HHHHHHHHHHHHHcCCcEEEeecccc
Q psy7300 155 --SEAFIKKFRVVVLTNST----------YDEQLAISQITHANDIALIIADTRGL 197 (986)
Q Consensus 155 --~~~~l~~~dvVI~~~~~----------~~~~~~i~~~c~~~~ip~I~~~~~G~ 197 (986)
..+.+.++|+||.+... ......+.+.|++.+..+|..++.|.
T Consensus 54 d~~~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~ 108 (224)
T 3h2s_A 54 VLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSAS 108 (224)
T ss_dssp GCCHHHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGG
T ss_pred cccHhhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEeccee
Confidence 22567889999987632 22334566677777777888776653
No 297
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.69 E-value=0.61 Score=51.26 Aligned_cols=72 Identities=25% Similarity=0.328 Sum_probs=48.9
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh---cCCCCEEEeecC
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ---LNPYVSTKAYTG 152 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~---lNp~V~v~~~~~ 152 (986)
+|.|||+|.+|+.++..|+..|. +.++++|.+. .+++.....+.. +.+.+.+.. .
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~-~- 60 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK-------------------KRAEGDALDLIHGTPFTRRANIYA-G- 60 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSCCCEEEE-C-
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCcEEEe-C-
Confidence 79999999999999999999995 5799998532 123333222222 223445554 2
Q ss_pred CCCHhhhccccEEEEecCC
Q psy7300 153 ELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~ 171 (986)
+.+.++++|+||.|...
T Consensus 61 --d~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 61 --DYADLKGSDVVIVAAGV 77 (319)
T ss_dssp --CGGGGTTCSEEEECCCC
T ss_pred --CHHHhCCCCEEEEccCC
Confidence 23457899999998753
No 298
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=89.68 E-value=1.1 Score=49.59 Aligned_cols=98 Identities=18% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEe
Q psy7300 70 MRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKA 149 (986)
Q Consensus 70 q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~ 149 (986)
...|...+|.|||+|.+|..+|++|...|+ +++++|.+.- ...+...+.. +..
T Consensus 11 ~~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~~~----------------------~~~~~a~~~G----~~~ 63 (338)
T 1np3_A 11 LSIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGS----------------------ATVAKAEAHG----LKV 63 (338)
T ss_dssp HHHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTC----------------------HHHHHHHHTT----CEE
T ss_pred cchhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEECChH----------------------HHHHHHHHCC----CEE
Q ss_pred ecCCCCHhhhccccEEEEecCCHHHHHHHH-HHHHHcCCcEEEeecccc
Q psy7300 150 YTGELSEAFIKKFRVVVLTNSTYDEQLAIS-QITHANDIALIIADTRGL 197 (986)
Q Consensus 150 ~~~~~~~~~l~~~dvVI~~~~~~~~~~~i~-~~c~~~~ip~I~~~~~G~ 197 (986)
. -.++.+++.|+||+|..+......+. ++.....-.-+.+.+.|+
T Consensus 64 ~---~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~~~ivi~~~gv 109 (338)
T 1np3_A 64 A---DVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFAHGF 109 (338)
T ss_dssp E---CHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCTTCEEEESCCH
T ss_pred c---cHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCCCCEEEEcCCc
No 299
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=89.68 E-value=1.4 Score=49.08 Aligned_cols=119 Identities=13% Similarity=0.194 Sum_probs=66.5
Q ss_pred cCcEEEEec-ChhhHHHHHHHH-HcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC---
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFA-MMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN--- 536 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa-~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~--- 536 (986)
+++|+|.|+ |+||.++++.|+ ..|. +++++|...-.. ... ... ...+.+.+.+..+...
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~------~V~~~~r~~~~~---~~~-----~~~--~~~~~~~~~~~~~~~~~~~ 65 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNH------SVVIVDSLVGTH---GKS-----DHV--ETRENVARKLQQSDGPKPP 65 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC------EEEEEECCTTTT---TCC-----TTS--CCHHHHHHHHHHSCSSCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCC------EEEEEecCCccc---ccc-----ccc--chHHHHHHHHHHhhccccc
Confidence 358999996 999999999999 9887 888887542110 000 000 0022233333333221
Q ss_pred ce---EEEEEcccCCcccccccccccc--C-CCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-cEEEE
Q psy7300 537 VN---ITYHENRVGPETEKVYDDLFFE--S-LDGIANALDN-----------------VEARIYMDRRCVYSRK-PLLES 592 (986)
Q Consensus 537 ~~---i~~~~~~v~~~~~~~~~~~f~~--~-~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~-pli~~ 592 (986)
-+ ++.+..++..... + ..+++ + +|+||++... +.+-..+-+.|.+.++ .+|..
T Consensus 66 ~~~~~~~~~~~Dl~d~~~--~-~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~ 142 (397)
T 1gy8_A 66 WADRYAALEVGDVRNEDF--L-NGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFS 142 (397)
T ss_dssp TTTCCCEEEESCTTCHHH--H-HHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCceEEEEECCCCCHHH--H-HHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEE
Confidence 12 5555556553211 1 23344 4 9999987542 1222345566777775 57777
Q ss_pred eecCCcc
Q psy7300 593 GTLGTKG 599 (986)
Q Consensus 593 g~~G~~G 599 (986)
++.+..|
T Consensus 143 SS~~v~g 149 (397)
T 1gy8_A 143 SSAAIFG 149 (397)
T ss_dssp EEGGGTB
T ss_pred CCHHHhC
Confidence 7765554
No 300
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.66 E-value=0.86 Score=48.67 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=32.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~------~V~~~~r~~ 49 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA------DIIACDICA 49 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCS
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeccc
Confidence 578889999996 7999999999999998 899998653
No 301
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.65 E-value=0.53 Score=49.51 Aligned_cols=72 Identities=11% Similarity=0.164 Sum_probs=48.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC---CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGV---KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GV---g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
.+|.|||+|.+|..++++|...|. ..++++|.+. .|++.+.+.+ .+. ...
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~-------------------~~~~~~~~~~-----g~~--~~~- 55 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT-------------------ANLKNASEKY-----GLT--TTT- 55 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH-------------------HHHHHHHHHH-----CCE--ECS-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH-------------------HHHHHHHHHh-----CCE--EeC-
Confidence 589999999999999999999997 4788877522 2444443332 122 111
Q ss_pred CCCHhhhccccEEEEecCCHHHH
Q psy7300 153 ELSEAFIKKFRVVVLTNSTYDEQ 175 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~~~~~ 175 (986)
-..+.+.+.|+||.|..+....
T Consensus 56 -~~~e~~~~aDvVilav~~~~~~ 77 (247)
T 3gt0_A 56 -DNNEVAKNADILILSIKPDLYA 77 (247)
T ss_dssp -CHHHHHHHCSEEEECSCTTTHH
T ss_pred -ChHHHHHhCCEEEEEeCHHHHH
Confidence 1245677899999999554333
No 302
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.64 E-value=1.1 Score=49.30 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=29.3
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.||.|||+|.+|..++..|+..|+ ..++++|-|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~-----~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL-----GDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 589999999999999999999988 359999855
No 303
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=89.64 E-value=0.64 Score=48.85 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=30.5
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~------~V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA------SAVLLDLP 45 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999986 8999999999999997 88888754
No 304
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=89.63 E-value=1.4 Score=49.00 Aligned_cols=102 Identities=14% Similarity=0.238 Sum_probs=60.4
Q ss_pred hhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCc-cCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee
Q psy7300 73 MASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSL-SDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY 150 (986)
Q Consensus 73 L~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~-sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~ 150 (986)
++..+|||.|+ |.+|+++++.|+..|..+++++|...-.. ..+ . -.+ .++.+
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l-----------------------~-~~~--~v~~~ 83 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV-----------------------P-DHP--AVRFS 83 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGS-----------------------C-CCT--TEEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhc-----------------------c-CCC--ceEEE
Confidence 55678999995 88999999999999955788887643211 000 0 012 23334
Q ss_pred cCCCC-H----hhhccccEEEEecCCH-----------------HHHHHHHHHHHHc-CC-cEEEeecccceEE
Q psy7300 151 TGELS-E----AFIKKFRVVVLTNSTY-----------------DEQLAISQITHAN-DI-ALIIADTRGLFAQ 200 (986)
Q Consensus 151 ~~~~~-~----~~l~~~dvVI~~~~~~-----------------~~~~~i~~~c~~~-~i-p~I~~~~~G~~G~ 200 (986)
..++. . +.++++|+||.+.... .....+.+.|++. ++ .||++++.+.||.
T Consensus 84 ~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~ 157 (377)
T 2q1s_A 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAE 157 (377)
T ss_dssp CSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-----
T ss_pred ECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCC
Confidence 44442 2 2456789888765321 1123455777777 66 6888887776653
No 305
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.62 E-value=1.8 Score=46.83 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=62.9
Q ss_pred hhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee-
Q psy7300 73 MASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY- 150 (986)
Q Consensus 73 L~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~- 150 (986)
+.+.+|||.|+ |++|+++++.|+..|. ++++++.+. .+.+.+.+.+....+ -.++.+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 45678999996 9999999999999996 677776421 123333333433322 123333
Q ss_pred cCCCC-----HhhhccccEEEEecC------CHH--------HHHHHHHHHHH-cC-CcEEEeecccceE
Q psy7300 151 TGELS-----EAFIKKFRVVVLTNS------TYD--------EQLAISQITHA-ND-IALIIADTRGLFA 199 (986)
Q Consensus 151 ~~~~~-----~~~l~~~dvVI~~~~------~~~--------~~~~i~~~c~~-~~-ip~I~~~~~G~~G 199 (986)
..++. .+.++++|+||.+.. +.. ....+.+.|++ .+ ..+|++++.+.+|
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL 137 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhc
Confidence 33332 235668899998753 121 12345566764 44 3577777766543
No 306
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=89.59 E-value=0.48 Score=50.27 Aligned_cols=98 Identities=11% Similarity=0.123 Sum_probs=59.4
Q ss_pred cEEEEec-ChhhHHHHHHHHHc--CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 464 KYFVVGA-GAIGCELLKNFAMM--GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 464 ~VlvvGa-GgiG~e~lknLa~~--Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
+|+|.|+ |.+|+.+++.|+.. |. ++++++.+. +. ... +.. +. ++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~------~V~~~~r~~---~~----------------~~~----~~~--~~--~~ 47 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS------QIVAIVRNP---AK----------------AQA----LAA--QG--IT 47 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG------GEEEEESCT---TT----------------CHH----HHH--TT--CE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc------eEEEEEcCh---Hh----------------hhh----hhc--CC--Ce
Confidence 5899997 99999999999987 76 788887532 10 010 111 22 34
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCC-----CHHHHHHHHHHHHHcCC-cEEEEeecCC
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALD-----NVEARIYMDRRCVYSRK-PLLESGTLGT 597 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-----n~~ar~~l~~~c~~~~~-pli~~g~~G~ 597 (986)
.+..++.+.. . + ...++++|+||++.. |...-..+-+.|.+.++ .+|..++.+.
T Consensus 48 ~~~~D~~d~~-~-~-~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 107 (286)
T 2zcu_A 48 VRQADYGDEA-A-L-TSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHA 107 (286)
T ss_dssp EEECCTTCHH-H-H-HHHTTTCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTT
T ss_pred EEEcCCCCHH-H-H-HHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 4455554321 1 1 356778999998754 23334456667777775 4777666543
No 307
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.55 E-value=0.44 Score=50.75 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=45.9
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
.|+++.++|-|+ +|||-++++.|+..|. ++.++|.+. .+.+.+++.++....
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga------~Vv~~~~~~-------------------~~~~~~~~~i~~~g~-- 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS------IVVAVELLE-------------------DRLNQIVQELRGMGK-- 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTC--
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC------EEEEEECCH-------------------HHHHHHHHHHHhcCC--
Confidence 588999999986 7899999999999998 899988532 355666666766553
Q ss_pred eEEEEEcccC
Q psy7300 538 NITYHENRVG 547 (986)
Q Consensus 538 ~i~~~~~~v~ 547 (986)
++.++..++.
T Consensus 57 ~~~~~~~Dvt 66 (254)
T 4fn4_A 57 EVLGVKADVS 66 (254)
T ss_dssp CEEEEECCTT
T ss_pred cEEEEEccCC
Confidence 4455555554
No 308
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=89.55 E-value=1.3 Score=48.49 Aligned_cols=107 Identities=13% Similarity=0.089 Sum_probs=65.6
Q ss_pred CcEEEEec-ChhhHHHHHHHHHc--CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMM--GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~--Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
++|+|.|+ |.||+.+++.|+.. |. +++++|...-.. +.. .+..+. .-++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~------~V~~~~r~~~~~-~~~--------------------~~~~~~-~~~~ 56 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDV------HVTVLDKLTYAG-NKA--------------------NLEAIL-GDRV 56 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTC------EEEEEECCCTTC-CGG--------------------GTGGGC-SSSE
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCC------EEEEEeCCCCCC-Chh--------------------HHhhhc-cCCe
Confidence 57999995 99999999999998 55 888887542100 000 001111 1245
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCCH-----------------HHHHHHHHHHHHcCCcEEEEeecCCcce
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDNV-----------------EARIYMDRRCVYSRKPLLESGTLGTKGN 600 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~-----------------~ar~~l~~~c~~~~~pli~~g~~G~~G~ 600 (986)
+.+..++.... .+ ...++++|+||.+.... .+-..+-+.|...+..+|..++.+.+|.
T Consensus 57 ~~~~~Dl~d~~--~~-~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~ 131 (348)
T 1oc2_A 57 ELVVGDIADAE--LV-DKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGD 131 (348)
T ss_dssp EEEECCTTCHH--HH-HHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCC
T ss_pred EEEECCCCCHH--HH-HHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCC
Confidence 55655655321 11 35677889999875421 1123455677777778888888765553
No 309
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=89.55 E-value=1.6 Score=47.41 Aligned_cols=95 Identities=11% Similarity=0.162 Sum_probs=58.8
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 77 DVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 77 ~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
+|||.| .|.+|+++++.|+..|. ++++++.+.-....+ .. +. ++.+..++.
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l-----------------------~~--~~--~~~~~~Dl~ 66 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRL-----------------------AY--LE--PECRVAEML 66 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGG-----------------------GG--GC--CEEEECCTT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhh-----------------------cc--CC--eEEEEecCC
Confidence 799999 58999999999999994 788888643211111 00 12 223333332
Q ss_pred -H----hhhccccEEEEecCC---------------HHHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 156 -E----AFIKKFRVVVLTNST---------------YDEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 156 -~----~~l~~~dvVI~~~~~---------------~~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
. +.++++|+||.+... ......+.+.|++.++ .||++++.+.+|
T Consensus 67 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 67 DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMP 131 (342)
T ss_dssp CHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSC
T ss_pred CHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhC
Confidence 1 345678888876431 1112356677887775 688888877665
No 310
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=89.54 E-value=0.19 Score=54.63 Aligned_cols=78 Identities=13% Similarity=0.164 Sum_probs=0.0
Q ss_pred ccccchhc--ccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHH
Q psy7300 57 LYSRQLYV--LGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVS 134 (986)
Q Consensus 57 ~y~Rqi~l--~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~ 134 (986)
.|+|+++- |.......|..++|.|||+|.+|..+|+.|...|. ++..+|...-....
T Consensus 102 ~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~-------------------- 160 (290)
T 3gvx_A 102 ENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNV-------------------- 160 (290)
T ss_dssp HHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTC--------------------
T ss_pred hhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhhCc-EEEEEecccccccc--------------------
Q ss_pred HHHHhhcCCCCEEEeecCCCCHhhhccccEEEEec
Q psy7300 135 HTNLSQLNPYVSTKAYTGELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 135 ~~~L~~lNp~V~v~~~~~~~~~~~l~~~dvVI~~~ 169 (986)
.....--+++++++|+|+++.
T Consensus 161 --------------~~~~~~l~ell~~aDiV~l~~ 181 (290)
T 3gvx_A 161 --------------DVISESPADLFRQSDFVLIAI 181 (290)
T ss_dssp --------------SEECSSHHHHHHHCSEEEECC
T ss_pred --------------ccccCChHHHhhccCeEEEEe
No 311
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=89.45 E-value=0.83 Score=50.77 Aligned_cols=91 Identities=21% Similarity=0.180 Sum_probs=55.3
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
+|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+.-....+. .+...+++.+.... .
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga------~Vvl~~r~~~~~~~l~------------~~l~~~~~~~~~~g--~ 101 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGA------NIVIAAKTAQPHPKLL------------GTIYTAAEEIEAVG--G 101 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEESCCSCCSSSC------------CCHHHHHHHHHHTT--C
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCC------EEEEEECChhhhhhhH------------HHHHHHHHHHHhcC--C
Confidence 578899999996 8999999999999998 8999986543222221 11233444455443 3
Q ss_pred eEEEEEcccCCccc--cccc--cccccCCCEEEEcC
Q psy7300 538 NITYHENRVGPETE--KVYD--DLFFESLDGIANAL 569 (986)
Q Consensus 538 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~a~ 569 (986)
++..+..++.+... ..+. .+-+...|+||++.
T Consensus 102 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnA 137 (346)
T 3kvo_A 102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNA 137 (346)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55666666653221 0110 11234677777764
No 312
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.44 E-value=0.51 Score=50.92 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=31.0
Q ss_pred hhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q psy7300 73 MASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDT 107 (986)
Q Consensus 73 L~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~ 107 (986)
++.++|+|.| .||+|..+++.|+..|.. ++++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 5678999999 999999999999999986 999885
No 313
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=89.43 E-value=0.86 Score=47.06 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=28.1
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY------ALALGARS 35 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467889886 7899999999999998 78888754
No 314
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.40 E-value=0.4 Score=50.07 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=30.2
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~------~v~~~~r~ 38 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA------TVVGTATS 38 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999986 8999999999999998 88888754
No 315
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=89.38 E-value=0.4 Score=51.19 Aligned_cols=36 Identities=28% Similarity=0.499 Sum_probs=28.8
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+-..++|+|.|+ |.||+++++.|+..|. +++++|.+
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV------EVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE------EEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC------eEEeccCc
Confidence 335678999996 8899999999998886 88888764
No 316
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=89.38 E-value=0.22 Score=55.06 Aligned_cols=36 Identities=19% Similarity=0.406 Sum_probs=32.5
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|..
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~------~V~~~dr~ 169 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGM------HVIGVNTT 169 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCC------EEEEECCC
Confidence 4778899999999999999999999988 89988864
No 317
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=89.38 E-value=0.47 Score=50.90 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=31.0
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
..+.++.++|.|+ ||||.++++.|+..|. ++.++|.
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~~ 61 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGF------DIAITGI 61 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCC------eEEEEeC
Confidence 3567788999986 8999999999999998 8888874
No 318
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=89.37 E-value=0.47 Score=50.50 Aligned_cols=36 Identities=25% Similarity=0.518 Sum_probs=30.8
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
++.+++|+|.|+ ||||.++++.|+..|. ++.+++.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r~ 62 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL------KVWINYRS 62 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788999986 8999999999999998 88888753
No 319
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.35 E-value=0.92 Score=49.82 Aligned_cols=34 Identities=26% Similarity=0.506 Sum_probs=30.1
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.||.|+|+|.+|+.++..|+..|+. +.++++|.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA----KEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCc
Confidence 4799999999999999999999984 589999854
No 320
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=89.34 E-value=0.8 Score=48.91 Aligned_cols=35 Identities=26% Similarity=0.426 Sum_probs=30.4
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 55 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL------RVFVCARG 55 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 66788999986 8999999999999997 88888754
No 321
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.27 E-value=1.1 Score=48.90 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=50.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh----cCCCCEEEeec
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ----LNPYVSTKAYT 151 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~----lNp~V~v~~~~ 151 (986)
.+|.|+|+|.+|..++..|+..|.-.++|+|-+. .|++.....|.+ ....+++....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 63 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE-------------------GVPQGKALDLYEASPIEGFDVRVTGTN 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc-------------------cHHHHHHHhHHHhHhhcCCCeEEEECC
Confidence 5899999999999999999999974599999542 122222223333 34455565533
Q ss_pred CCCCHhhhccccEEEEecC
Q psy7300 152 GELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~ 170 (986)
+ . +-+++.|+||.+..
T Consensus 64 d-~--~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 64 N-Y--ADTANSDVIVVTSG 79 (309)
T ss_dssp C-G--GGGTTCSEEEECCC
T ss_pred C-H--HHHCCCCEEEEcCC
Confidence 2 2 44789999999864
No 322
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.24 E-value=0.69 Score=53.40 Aligned_cols=94 Identities=16% Similarity=0.207 Sum_probs=61.8
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
++.++|+|+|+|+.|..+|+.|...|. +++..|..... .+ ...+.|++. .+.+.. .
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~----------------~~---~~~~~L~~~--gi~~~~--g 62 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFD----------------EN---PTAQSLLEE--GIKVVC--G 62 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGG----------------GC---HHHHHHHHT--TCEEEE--S
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCccc----------------CC---hHHHHHHhC--CCEEEE--C
Confidence 567899999999999999999999995 79999964410 00 122456555 444442 2
Q ss_pred CCCHhhhcc-ccEEEEecCCHHHHHHHHHHHHHcCCcEEE
Q psy7300 153 ELSEAFIKK-FRVVVLTNSTYDEQLAISQITHANDIALII 191 (986)
Q Consensus 153 ~~~~~~l~~-~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~ 191 (986)
...++.+.+ +|+||.+..-... .-.-..+++.|+|++.
T Consensus 63 ~~~~~~~~~~~d~vv~spgi~~~-~p~~~~a~~~gi~v~~ 101 (451)
T 3lk7_A 63 SHPLELLDEDFCYMIKNPGIPYN-NPMVKKALEKQIPVLT 101 (451)
T ss_dssp CCCGGGGGSCEEEEEECTTSCTT-SHHHHHHHHTTCCEEC
T ss_pred CChHHhhcCCCCEEEECCcCCCC-ChhHHHHHHCCCcEEe
Confidence 223456666 9999987532111 1123467888999875
No 323
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=89.21 E-value=1 Score=49.31 Aligned_cols=72 Identities=31% Similarity=0.296 Sum_probs=51.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC---CCCEEEeec
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN---PYVSTKAYT 151 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN---p~V~v~~~~ 151 (986)
.||.|+|+|.+|..++..|+..|. +++.|+|-+ ..|++..+..|.+.. ..+++..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 379999999999999999998874 579999843 235555445555533 3556665
Q ss_pred CCCCHhhhccccEEEEecC
Q psy7300 152 GELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~ 170 (986)
. +.+-+++.|+||.+..
T Consensus 60 ~--~~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 60 G--SYGDLEGARAVVLAAG 76 (310)
T ss_dssp C--CGGGGTTEEEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 3455889999999864
No 324
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=89.18 E-value=1.2 Score=48.45 Aligned_cols=33 Identities=24% Similarity=0.238 Sum_probs=29.7
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
.||.|||||++|+.++-.|++.|+. ++|.|+|-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~----~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEeC
Confidence 4799999999999999999999985 78999973
No 325
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.17 E-value=0.58 Score=51.06 Aligned_cols=32 Identities=25% Similarity=0.144 Sum_probs=27.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
..+|+|+|+|++|+.++..|. +|. .+++++.+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC-ceEEEECC
Confidence 358999999999999999999 884 78888753
No 326
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=89.16 E-value=0.92 Score=48.25 Aligned_cols=35 Identities=20% Similarity=0.455 Sum_probs=30.4
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 54 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA------RVYTCSRN 54 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999986 8999999999999997 88888754
No 327
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=89.08 E-value=0.88 Score=49.06 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=27.3
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q psy7300 75 SSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDT 107 (986)
Q Consensus 75 ~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~ 107 (986)
+.+|||.|+ |++|+++++.|+..| .+++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEcc
Confidence 468999996 899999999999999 47888874
No 328
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.08 E-value=0.75 Score=49.43 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=30.2
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
-.+.++.|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGV------TVGALGRT 61 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 3577888999986 8899999999999998 89998754
No 329
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=89.06 E-value=0.69 Score=49.41 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=31.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC------HTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 578899999996 7899999999999998 89998753
No 330
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=89.06 E-value=0.61 Score=49.64 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=31.7
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 44 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA------RVVLADLP 44 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 467888999996 8999999999999998 89998864
No 331
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.03 E-value=0.56 Score=52.51 Aligned_cols=36 Identities=31% Similarity=0.399 Sum_probs=32.7
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
.++..+|+|+|+|++|..++..+...|. +++++|.+
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~ 199 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDIN 199 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3677999999999999999999999999 89999853
No 332
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.01 E-value=0.27 Score=56.87 Aligned_cols=33 Identities=18% Similarity=0.427 Sum_probs=30.6
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
++|.|||+|.+|+.++..|+..|+ .++++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~------~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI------ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC------eEEEEECcH
Confidence 589999999999999999999998 999998764
No 333
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.94 E-value=0.33 Score=54.61 Aligned_cols=37 Identities=30% Similarity=0.518 Sum_probs=35.4
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
+|+..||+|+|+|..|..+|+.|+..|+++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6789999999999999999999999999999999976
No 334
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.92 E-value=0.78 Score=48.92 Aligned_cols=35 Identities=29% Similarity=0.459 Sum_probs=30.3
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
.|.+++++|.|+ ||||.++++.|+..|. ++.++|.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~~ 63 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA------AVALTYV 63 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 367888999996 7899999999999998 8888764
No 335
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=88.91 E-value=0.62 Score=49.80 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=29.2
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..+.++.++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGY------GVALAGRR 61 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 4577888888886 8999999999999998 89998854
No 336
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=88.90 E-value=0.91 Score=48.21 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=30.8
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 54 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGC------SVVVASRN 54 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 456788999986 8999999999999997 88888754
No 337
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=88.89 E-value=0.57 Score=50.02 Aligned_cols=43 Identities=26% Similarity=0.264 Sum_probs=30.9
Q ss_pred cCHHHH-HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 452 FGKNFQ-EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 452 ~G~~~q-~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|+..+ ..|.++.|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 17 ~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (270)
T 3ftp_A 17 QGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGA------MVIGTATT 61 (270)
T ss_dssp ------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 344333 2467788888886 8999999999999998 88888753
No 338
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=88.88 E-value=0.88 Score=49.83 Aligned_cols=73 Identities=22% Similarity=0.267 Sum_probs=50.1
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhh---CCCceE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVM---NPNVNI 539 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~---np~~~i 539 (986)
.||.|+|+|.+|..++-.|+..|+. ++|.++|-|. .|++..+.-+... ...+++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~~-------------------~k~~g~a~dl~~~~~~~~~~~v 57 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVA----REVVLVDLDR-------------------KLAQAHAEDILHATPFAHPVWV 57 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSSH-------------------HHHHHHHHHHHTTGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCCh-------------------hHHHHHHHHHHHhHhhcCCeEE
Confidence 4799999999999999999998874 6899998542 3344333333332 235555
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
.+ ++ .+-++++|+||.+..
T Consensus 58 ~~-----~~-------~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 58 WA-----GS-------YGDLEGARAVVLAAG 76 (310)
T ss_dssp EE-----CC-------GGGGTTEEEEEECCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCC
Confidence 53 11 233789999999864
No 339
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=88.86 E-value=1.9 Score=46.87 Aligned_cols=35 Identities=31% Similarity=0.418 Sum_probs=28.8
Q ss_pred hhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 73 MASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 73 L~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d 108 (986)
|++.+|||.|+ |++|+++++.|+..|. +++++|..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRR 36 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 34678999996 8999999999999995 78888754
No 340
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=88.85 E-value=0.48 Score=50.40 Aligned_cols=30 Identities=23% Similarity=0.430 Sum_probs=27.1
Q ss_pred cEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 464 KYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 464 ~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+|+|.|+ |.||..+++.|+..|. ++++++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r 37 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY------DIYPFDK 37 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE------EEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC------EEEEecc
Confidence 7999996 9999999999998886 8888876
No 341
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=88.84 E-value=1.2 Score=47.53 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=27.9
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 77 DVLISGL-GGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 77 ~VlIiG~-gglGseiaknLvl~GVg~itlvD~d 108 (986)
+|||.|+ |.+|+++++.|+..|...+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5899996 8999999999999996678888764
No 342
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.83 E-value=1.6 Score=44.47 Aligned_cols=97 Identities=16% Similarity=0.201 Sum_probs=61.0
Q ss_pred CcEEEEc-CChhHHHHHHHHH-HhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 76 SDVLISG-LGGLGVEIAKNVI-LSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 76 s~VlIiG-~gglGseiaknLv-l~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
++|+|.| .|++|.++++.|+ ..|. ++++++.+.- .+++ .+.+..+. +..+..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~------------------~~~~----~~~~~~~~--~~~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLK------------------TRIP----PEIIDHER--VTVIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHH------------------HHSC----HHHHTSTT--EEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCcc------------------ccch----hhccCCCc--eEEEECC
Confidence 4599999 6999999999999 8887 7888875321 0111 11112233 3444444
Q ss_pred CC-----HhhhccccEEEEecCC--HHHHHHHHHHHHHcCC-cEEEeecccce
Q psy7300 154 LS-----EAFIKKFRVVVLTNST--YDEQLAISQITHANDI-ALIIADTRGLF 198 (986)
Q Consensus 154 ~~-----~~~l~~~dvVI~~~~~--~~~~~~i~~~c~~~~i-p~I~~~~~G~~ 198 (986)
+. .+.+++.|+||.+... .. ...+.+.|++.++ .+|..++.+.+
T Consensus 61 ~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 61 FQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXNIRRVIGVSMAGLS 112 (221)
T ss_dssp TTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTT
T ss_pred CCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcCCCeEEEEeeceec
Confidence 42 2356789999987643 33 4456667777776 47776666643
No 343
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=88.82 E-value=0.68 Score=48.36 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=28.8
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
|.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA------NVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 45678888886 8999999999999997 8888764
No 344
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.78 E-value=1.4 Score=48.34 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=50.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhc----CCCCEEEeec
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQL----NPYVSTKAYT 151 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~l----Np~V~v~~~~ 151 (986)
+|.|+|+|.+|+.+|..|+..|+ .+++|+|-+. .|++..+.-|++. ...+++....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~~ 62 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGTN 62 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEECC
Confidence 79999999999999999999997 5899999532 1333333334332 2345555332
Q ss_pred CCCCHhhhccccEEEEecC
Q psy7300 152 GELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~ 170 (986)
+.+-+++.|+||.+..
T Consensus 63 ---~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 63 ---DYGPTEDSDVCIITAG 78 (314)
T ss_dssp ---SSGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEECCC
Confidence 2456789999999864
No 345
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=88.78 E-value=0.33 Score=52.55 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=32.5
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++++|+|+||.|..++..|+..|+ ++|+|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~-----~~v~v~nRt 155 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA-----KDIYVVTRN 155 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC-----SEEEEEESC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC-----CEEEEEeCC
Confidence 568899999999999999999999999 799998644
No 346
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.76 E-value=0.72 Score=53.74 Aligned_cols=117 Identities=16% Similarity=0.230 Sum_probs=66.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCcc-CchHHHHHHHHHhhc-CCCCEEEeecC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDV-GRNRAEVSHTNLSQL-NPYVSTKAYTG 152 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~di-Gk~Ka~a~~~~L~~l-Np~V~v~~~~~ 152 (986)
..+|.|||+|.+|..+|++|+..|. .++++|.+.-....+...-... ..+ + +....+.+..+ .+++-+.....
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~g-~~i~~---~~s~~e~v~~l~~aDvVil~Vp~ 78 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKG-TKVVG---AQSLKEMVSKLKKPRRIILLVKA 78 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTT-SSCEE---CSSHHHHHHTBCSSCEEEECSCS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcccCC-Cceec---cCCHHHHHhhccCCCEEEEecCC
Confidence 4689999999999999999999997 7999987543222221100000 000 0 00111222222 34554444433
Q ss_pred C-CCH-------hhhccccEEEEecCC-HHHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 153 E-LSE-------AFIKKFRVVVLTNST-YDEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 153 ~-~~~-------~~l~~~dvVI~~~~~-~~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
. ..+ ..++.-++||++.-. +....++.+.+.+.++.|+.+.+.|
T Consensus 79 ~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 79 GQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp SHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 2 111 123455788887644 3444566667777888888776655
No 347
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.76 E-value=0.89 Score=47.17 Aligned_cols=90 Identities=7% Similarity=0.009 Sum_probs=57.5
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
...+|+|+|+|.+|..+++.|...| .++++|.|. .++ +.+. ++ +.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g-------~v~vid~~~-------------------~~~----~~~~---~~--~~ 52 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSE-------VFVLAEDEN-------------------VRK----KVLR---SG--AN 52 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSE-------EEEEESCGG-------------------GHH----HHHH---TT--CE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCC-------eEEEEECCH-------------------HHH----HHHh---cC--Ce
Confidence 3568999999999999999997543 377887543 111 1122 23 33
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCC
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRK 587 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~ 587 (986)
.+..+... ...+...-++++|.|+.++++.+.-..+-..++..+.
T Consensus 53 ~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 53 FVHGDPTR--VSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp EEESCTTC--HHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred EEEcCCCC--HHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 44444332 1122223367899999999998877777788877654
No 348
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=88.75 E-value=0.62 Score=49.68 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=32.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
+|.+++++|.|+ ||||.++++.|+..|. ++.++|.+.
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~------~V~~~~r~~ 45 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA------DIIAVDIAG 45 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCS
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC------EEEEEeccc
Confidence 578889999996 8999999999999998 899998653
No 349
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=88.73 E-value=0.63 Score=48.28 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=29.8
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~r~ 40 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS------TVIITGTS 40 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56778899986 8999999999999987 88888754
No 350
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.67 E-value=0.8 Score=49.68 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=29.9
Q ss_pred cCcEEEEe-cChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 462 KLKYFVVG-AGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 462 ~~~VlvvG-aGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
..+|.||| +|.+|+.+++.|+..|. +++++|.+.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~------~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY------PISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC------CEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC------eEEEEECCc
Confidence 35899999 99999999999999987 899998653
No 351
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.66 E-value=0.74 Score=50.64 Aligned_cols=74 Identities=26% Similarity=0.273 Sum_probs=49.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCC---CCEEEee
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNP---YVSTKAY 150 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp---~V~v~~~ 150 (986)
..||.|+|+|.+|..++-.|+..|. ++++|+|-+. .|++.....|.+..| .+++..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~i~~- 66 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK-------------------EKAIGEAMDINHGLPFMGQMSLYA- 66 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC----------------------CCHHHHHHTTSCCCTTCEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------HHHHHHHHHHHHhHHhcCCeEEEE-
Confidence 4689999999999999999999886 6799999642 111122233444333 444443
Q ss_pred cCCCCHhhhccccEEEEecCC
Q psy7300 151 TGELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 151 ~~~~~~~~l~~~dvVI~~~~~ 171 (986)
. +.+-+++.|+||.+...
T Consensus 67 -~--~~~a~~~aDvVii~~g~ 84 (318)
T 1y6j_A 67 -G--DYSDVKDCDVIVVTAGA 84 (318)
T ss_dssp ----CGGGGTTCSEEEECCCC
T ss_pred -C--CHHHhCCCCEEEEcCCC
Confidence 2 24558899999998753
No 352
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.63 E-value=1.1 Score=49.54 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=29.6
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.||.|+|+|.+|..++..|+..|. ..++++|.|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~-----~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALREL-----ADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 589999999999999999999987 369999865
No 353
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.63 E-value=1.1 Score=49.50 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=30.6
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
..||.|+|+|.+|+.++..|+..|+. +.++++|-
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~----~ev~L~Di 54 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLA----DEVALVDV 54 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCC----SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEEC
Confidence 46899999999999999999999984 68999985
No 354
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=88.58 E-value=0.33 Score=52.20 Aligned_cols=36 Identities=31% Similarity=0.342 Sum_probs=30.9
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 467888999986 8899999999999998 88888754
No 355
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=88.54 E-value=0.72 Score=51.47 Aligned_cols=76 Identities=18% Similarity=0.192 Sum_probs=50.7
Q ss_pred hcCcEEEEecChhhHHHHHHHHH-cCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAM-MGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~-~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
..++|+|||+|+.|..++..|.. .++ .+++|+|.+. .|++.+++.+... +++.+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~-----~~V~V~~r~~-------------------~~a~~la~~~~~~-~g~~~ 182 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGI-----EEIVAYDTDP-------------------LATAKLIANLKEY-SGLTI 182 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCC-----CEEEEECSSH-------------------HHHHHHHHHHTTC-TTCEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCC-----cEEEEEcCCH-------------------HHHHHHHHHHHhc-cCceE
Confidence 56789999999999999999864 466 5898886432 4555555554331 34444
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDN 571 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn 571 (986)
.... +. .+.+.++|+|++|+-+
T Consensus 183 ~~~~-----~~-----~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 183 RRAS-----SV-----AEAVKGVDIITTVTAD 204 (350)
T ss_dssp EECS-----SH-----HHHHTTCSEEEECCCC
T ss_pred EEeC-----CH-----HHHHhcCCEEEEeccC
Confidence 3221 11 3456789999999865
No 356
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.53 E-value=0.68 Score=49.26 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=30.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
++.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 39 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGA------KVTITGRH 39 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 356778889886 8999999999999997 88888754
No 357
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=88.50 E-value=0.44 Score=50.24 Aligned_cols=63 Identities=17% Similarity=0.279 Sum_probs=45.8
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHH---cCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAM---MGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNP 535 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~---~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np 535 (986)
|.+++++|.|+ ||||.++++.|+. .|. ++.++|.+. .+.+.+++.+...+|
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~ 58 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS------VMLVSARSE-------------------SMLRQLKEELGAQQP 58 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC------eEEEEeCCH-------------------HHHHHHHHHHHhhCC
Confidence 56677888886 8999999999998 787 888887432 344555566666666
Q ss_pred CceEEEEEcccC
Q psy7300 536 NVNITYHENRVG 547 (986)
Q Consensus 536 ~~~i~~~~~~v~ 547 (986)
..++..+..++.
T Consensus 59 ~~~~~~~~~Dv~ 70 (259)
T 1oaa_A 59 DLKVVLAAADLG 70 (259)
T ss_dssp TSEEEEEECCTT
T ss_pred CCeEEEEecCCC
Confidence 667777666654
No 358
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=88.50 E-value=0.74 Score=55.73 Aligned_cols=107 Identities=18% Similarity=0.304 Sum_probs=64.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN 536 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~ 536 (986)
.+..++|+|.|+ |.||+++++.|+.. |. +++++|... +.+.+ . . ..
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~------~V~~~~r~~---~~~~~-~-~---------------------~~ 359 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIGS---DAISR-F-L---------------------NH 359 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSE------EEEEEESCC---TTTGG-G-T---------------------TC
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCC------EEEEEEcCc---hhhhh-h-c---------------------cC
Confidence 356788999996 88999999999987 65 888887643 11111 0 0 01
Q ss_pred ceEEEEEcccCCccccccccccccCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCcEEEEeecCCcc
Q psy7300 537 VNITYHENRVGPETEKVYDDLFFESLDGIANALDN-----------------VEARIYMDRRCVYSRKPLLESGTLGTKG 599 (986)
Q Consensus 537 ~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~pli~~g~~G~~G 599 (986)
.+++.+..++..... .+ ...++++|+||.+... +.+-..+-+.|...+..+|..++.+.+|
T Consensus 360 ~~v~~v~~Dl~d~~~-~~-~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg 437 (660)
T 1z7e_A 360 PHFHFVEGDISIHSE-WI-EYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437 (660)
T ss_dssp TTEEEEECCTTTCHH-HH-HHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred CceEEEECCCCCcHH-HH-HHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcC
Confidence 235555555543211 11 2345678999985321 1222345667777777788887765544
No 359
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=88.49 E-value=0.63 Score=49.92 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=30.8
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
..|.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~------~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA------NIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 4567888999986 8999999999999998 8888875
No 360
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.43 E-value=1.6 Score=47.67 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=29.2
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.||.|+|+|.+|..++..|+..|. -.++++|-|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~-----~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKEL-----GDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-----CeEEEEeCC
Confidence 589999999999999999999986 259999865
No 361
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.42 E-value=1.2 Score=49.00 Aligned_cols=74 Identities=18% Similarity=0.176 Sum_probs=50.3
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHh---hCCCce
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKV---MNPNVN 538 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~---~np~~~ 538 (986)
..||.|+|+|.+|..++-.|+..|+. .+|.++|-|. .|++..+.-+.. +.+.++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~----~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~ 65 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIFK-------------------DKTKGDAIDLSNALPFTSPKK 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSCH-------------------HHHHHHHHHHHTTGGGSCCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCCc-------------------hHhHHHHHHHHHHHHhcCCeE
Confidence 46899999999999999999998874 6899998532 334332333332 224455
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcCC
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANALD 570 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D 570 (986)
+.+ +. .+-++++|+||.+..
T Consensus 66 i~~-----~~-------~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 66 IYS-----AE-------YSDAKDADLVVITAG 85 (326)
T ss_dssp EEE-----CC-------GGGGGGCSEEEECCC
T ss_pred EEE-----CC-------HHHhCCCCEEEEcCC
Confidence 553 11 233789999999864
No 362
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=88.41 E-value=0.45 Score=50.84 Aligned_cols=36 Identities=25% Similarity=0.519 Sum_probs=30.6
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~------~V~~~~r~ 59 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA------RILINGTD 59 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467888999986 8999999999999998 88887643
No 363
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.40 E-value=1.8 Score=47.41 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=58.2
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
..+|.|||+|.+|..+++.|...|.. .+|+++|.+. .+.+. +.+..-...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~----~~V~~~dr~~-------------------~~~~~----a~~~G~~~~--- 82 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFK----GKIYGYDINP-------------------ESISK----AVDLGIIDE--- 82 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCC----SEEEEECSCH-------------------HHHHH----HHHTTSCSE---
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCC----CEEEEEECCH-------------------HHHHH----HHHCCCcch---
Confidence 36899999999999999999999872 4888887543 11111 112210000
Q ss_pred EEcccCCccccccccc-cccCCCEEEEcCCCHHHHHHHHHHHHH--cCCcEEEEee
Q psy7300 542 HENRVGPETEKVYDDL-FFESLDGIANALDNVEARIYMDRRCVY--SRKPLLESGT 594 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~-f~~~~DvVi~a~Dn~~ar~~l~~~c~~--~~~pli~~g~ 594 (986)
... + ..+ ...++|+||.|+-....+..+.++... .+..+++.++
T Consensus 83 ----~~~---~--~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 83 ----GTT---S--IAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp ----EES---C--TTGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred ----hcC---C--HHHHhhccCCEEEEeCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence 000 0 124 578999999998765555556555432 3455666554
No 364
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.38 E-value=0.96 Score=48.63 Aligned_cols=32 Identities=19% Similarity=0.389 Sum_probs=27.5
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 76 SDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 76 s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d 108 (986)
.+|||.|+ |.+|+.+++.|+..|. +++++|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 37999996 8899999999999996 68888754
No 365
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.38 E-value=0.38 Score=50.63 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=31.4
Q ss_pred HHHHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 457 QEKLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 457 q~~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
...+..++|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~------~V~~~~r~~ 52 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH------EVTIGTRDP 52 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCH
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCh
Confidence 357889999999999999999999999997 899998653
No 366
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.38 E-value=2.3 Score=45.22 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=50.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVK-SVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg-~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
.+|.|||+|.+|..+++.|...|.. +++++|.+. .+++. +.+.. +.... ..+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~~----~~~~g--~~~~~-~~~- 54 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISK----AVDLG--IIDEG-TTS- 54 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHH----HHHTT--SCSEE-ESC-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-------------------HHHHH----HHHCC--Ccccc-cCC-
Confidence 4799999999999999999999963 688887532 12222 22221 11011 111
Q ss_pred CHhhhc-cccEEEEecCCHHHHHHHHHHH
Q psy7300 155 SEAFIK-KFRVVVLTNSTYDEQLAISQIT 182 (986)
Q Consensus 155 ~~~~l~-~~dvVI~~~~~~~~~~~i~~~c 182 (986)
.++.+. ++|+||.|..+......+.++.
T Consensus 55 ~~~~~~~~aDvVilavp~~~~~~v~~~l~ 83 (281)
T 2g5c_A 55 IAKVEDFSPDFVMLSSPVRTFREIAKKLS 83 (281)
T ss_dssp GGGGGGTCCSEEEECSCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEEcCCHHHHHHHHHHHH
Confidence 235677 8999999997655554444443
No 367
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=88.37 E-value=0.38 Score=47.55 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=29.7
Q ss_pred cEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 464 KYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 464 ~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
+|+|||+|.+|++++..|++.|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~------~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL------KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC------cEEEEeCCC
Confidence 69999999999999999999998 899999764
No 368
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=88.36 E-value=2.2 Score=46.21 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=28.6
Q ss_pred hcCcEEEEc-CChhHHHHHHHHHHhCC-CeEEEEeCC
Q psy7300 74 ASSDVLISG-LGGLGVEIAKNVILSGV-KSVTLHDTT 108 (986)
Q Consensus 74 ~~s~VlIiG-~gglGseiaknLvl~GV-g~itlvD~d 108 (986)
.+.+|||.| .|++|+++++.|+..|- -+++++|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 345799999 59999999999999984 478888754
No 369
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=88.36 E-value=0.69 Score=48.89 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=30.5
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA------KVVFGDIL 40 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 66788999996 8999999999999997 88888754
No 370
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=88.36 E-value=2 Score=47.80 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=29.0
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 75 SSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 75 ~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
..+|||.|+ |.+|+++++.|+..|. +++++|.+.
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 63 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWKK 63 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCC
Confidence 368999996 8999999999999995 788888643
No 371
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.31 E-value=0.33 Score=54.61 Aligned_cols=37 Identities=30% Similarity=0.490 Sum_probs=34.7
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+|...||+|+|+|..|..+++.|+.+|+ ++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~-----~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV-----KNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 6789999999999999999999999998 799999976
No 372
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=88.31 E-value=0.94 Score=47.58 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=31.3
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~------~V~~~~r~ 42 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGA------KVVIVDRD 42 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEcCC
Confidence 467788999996 7899999999999998 89998854
No 373
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.30 E-value=0.56 Score=49.31 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=28.7
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHH-cCCCcCCCCeEEEEeCC
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAM-MGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~-~Gv~~g~~g~i~ivD~D 500 (986)
++++|+|.|+ |+||.++++.|+. .|. ++++++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~------~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG------DVVLTARD 38 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS------EEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC------eEEEEeCC
Confidence 3567888886 8999999999999 887 88888754
No 374
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=88.30 E-value=2 Score=46.76 Aligned_cols=107 Identities=13% Similarity=0.196 Sum_probs=62.6
Q ss_pred CcEEEEec-ChhhHHHHHHHHHc---C---CCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCC
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMM---G---VGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNP 535 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~---G---v~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np 535 (986)
++|+|.|+ |.||+.+++.|+.. | . +++++|...-. .+.. . +..+..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~------~V~~~~r~~~~-~~~~--~------------------~~~~~~ 53 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAD------EVIVLDSLTYA-GNRA--N------------------LAPVDA 53 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCS------EEEEEECCCTT-CCGG--G------------------GGGGTT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCce------EEEEEECCCcc-Cchh--h------------------hhhccc
Confidence 36999995 99999999999985 6 4 78888753210 0000 0 001111
Q ss_pred CceEEEEEcccCCccccccccccccCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-cEEEEeecCC
Q psy7300 536 NVNITYHENRVGPETEKVYDDLFFESLDGIANALDN-----------------VEARIYMDRRCVYSRK-PLLESGTLGT 597 (986)
Q Consensus 536 ~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn-----------------~~ar~~l~~~c~~~~~-pli~~g~~G~ 597 (986)
.-+++.+..++.+.. .+ ...+.++|+||.+... ..+-..+-+.|...++ .+|..++.+.
T Consensus 54 ~~~~~~~~~Dl~d~~--~~-~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~v 130 (337)
T 1r6d_A 54 DPRLRFVHGDIRDAG--LL-ARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQV 130 (337)
T ss_dssp CTTEEEEECCTTCHH--HH-HHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CCCeEEEEcCCCCHH--HH-HHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHH
Confidence 123555555554321 11 3455789999987542 1222355667777776 6777777655
Q ss_pred cc
Q psy7300 598 KG 599 (986)
Q Consensus 598 ~G 599 (986)
+|
T Consensus 131 yg 132 (337)
T 1r6d_A 131 YG 132 (337)
T ss_dssp GC
T ss_pred hC
Confidence 44
No 375
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=88.30 E-value=0.58 Score=50.66 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=31.4
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~ 74 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGA------NVAVAARS 74 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 467788999986 7899999999999998 89998865
No 376
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=88.22 E-value=0.63 Score=50.32 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=26.9
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+++|+|.|+ |.||+.+++.|+..|. ++++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~------~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGD------VELVLRT 35 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT------EEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC------eEEEEec
Confidence 468999996 8999999999998886 6777654
No 377
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=88.15 E-value=0.85 Score=48.01 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=30.0
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~------~V~~~~r~ 47 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA------VIHTCARN 47 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999986 8999999999999997 88888754
No 378
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=88.15 E-value=2.4 Score=45.25 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=59.7
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCC--cHHHHHHHHHHhhCCCce
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQ--PKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~--~Ka~~a~~~l~~~np~~~ 538 (986)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.- .-.. .|+..+. .+. .+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~--------------~~~~~~~~~~~~~-~l~--~~~-- 56 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN------PTYALVRKTI--------------TAANPETKEELID-NYQ--SLG-- 56 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC------CEEEEECCSC--------------CSSCHHHHHHHHH-HHH--HTT--
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC------cEEEEECCCc--------------ccCChHHHHHHHH-HHH--hCC--
Confidence 468999997 9999999999999987 7887764320 0001 2322221 122 233
Q ss_pred EEEEEcccCCccccccccccccCCCEEEEcCCC--HHHHHHHHHHHHHcC-Cc
Q psy7300 539 ITYHENRVGPETEKVYDDLFFESLDGIANALDN--VEARIYMDRRCVYSR-KP 588 (986)
Q Consensus 539 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn--~~ar~~l~~~c~~~~-~p 588 (986)
++.+..++.+.. .+ ...++++|+||++... ...-..+-+.|.+.+ +.
T Consensus 57 v~~v~~D~~d~~-~l--~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 106 (307)
T 2gas_A 57 VILLEGDINDHE-TL--VKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVK 106 (307)
T ss_dssp CEEEECCTTCHH-HH--HHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCS
T ss_pred CEEEEeCCCCHH-HH--HHHHhCCCEEEECCcccccccHHHHHHHHHhcCCce
Confidence 344555554321 11 4567899999998753 333445566777766 44
No 379
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=88.14 E-value=0.58 Score=49.62 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=30.1
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~r 43 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESV------NLVLHYH 43 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSC------EEEEEES
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEec
Confidence 357788999986 8999999999999998 8888764
No 380
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.11 E-value=1.2 Score=49.21 Aligned_cols=91 Identities=20% Similarity=0.131 Sum_probs=54.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC------CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh--cCCCC-
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV------KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ--LNPYV- 145 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV------g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~--lNp~V- 145 (986)
..+|.|||+|.+|+.+|..|+.+|. ..++++|.+.-. .++.+++.+.+.-.. .-|..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~--------------~~~~~~~~l~~~~~~~~~~~~~~ 73 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDI--------------GGKKLTEIINTQHENVKYLPGHK 73 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBS--------------SSSBHHHHHHHHSCCTTTSTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhh--------------hhhHHHHHHHhcCcccccCCccc
Confidence 3589999999999999999999993 579999864320 023344444322100 00111
Q ss_pred ---EEEeecCCCCHhhhccccEEEEecCCHHHHHHHHHH
Q psy7300 146 ---STKAYTGELSEAFIKKFRVVVLTNSTYDEQLAISQI 181 (986)
Q Consensus 146 ---~v~~~~~~~~~~~l~~~dvVI~~~~~~~~~~~i~~~ 181 (986)
.+.... + ..+.+.++|+||.|.-+......+.++
T Consensus 74 ~~~~~~~~~-~-~~~~~~~aD~Vilav~~~~~~~v~~~i 110 (354)
T 1x0v_A 74 LPPNVVAVP-D-VVQAAEDADILIFVVPHQFIGKICDQL 110 (354)
T ss_dssp CCTTEEEES-S-HHHHHTTCSEEEECCCGGGHHHHHHHH
T ss_pred CccCeEEEc-C-HHHHHcCCCEEEEeCCHHHHHHHHHHH
Confidence 122111 1 134577899999999764444444433
No 381
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.10 E-value=0.4 Score=53.97 Aligned_cols=38 Identities=21% Similarity=0.490 Sum_probs=36.0
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
+++..||+|+|+|..|..+|+.|+.+|+++|+++|.+-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 67899999999999999999999999999999999874
No 382
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=88.10 E-value=2.1 Score=50.13 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=29.0
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 75 SSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 75 ~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
..+|||.| .|.+|+.+++.|+..|. +++.++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKE 181 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCC
Confidence 45899999 68899999999999997 788887643
No 383
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.08 E-value=1.2 Score=51.89 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=29.5
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..+|.|||+|.+|+.++.+|+..|. +++++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~------~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY------TVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC------EEEEEcCC
Confidence 4689999999999999999999988 78888754
No 384
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.07 E-value=1.2 Score=48.77 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=51.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC---CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeec
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGV---KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYT 151 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GV---g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~ 151 (986)
..+|.|||+|.+|+.++.+|..+|+ ..++++|.+.- ..+++.+. +. .+.+. .
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~-----------------~~~~~~l~----~~--G~~~~--~ 76 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD-----------------LATVSALR----KM--GVKLT--P 76 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT-----------------SHHHHHHH----HH--TCEEE--S
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc-----------------HHHHHHHH----Hc--CCEEe--C
Confidence 4589999999999999999999995 67888875320 01333322 22 23322 1
Q ss_pred CCCCHhhhccccEEEEecCCHHHHHHHHHH
Q psy7300 152 GELSEAFIKKFRVVVLTNSTYDEQLAISQI 181 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~~~~~~~~i~~~ 181 (986)
+ ..+.+.++|+||.|.-+......+..+
T Consensus 77 -~-~~e~~~~aDvVilav~~~~~~~vl~~l 104 (322)
T 2izz_A 77 -H-NKETVQHSDVLFLAVKPHIIPFILDEI 104 (322)
T ss_dssp -C-HHHHHHHCSEEEECSCGGGHHHHHHHH
T ss_pred -C-hHHHhccCCEEEEEeCHHHHHHHHHHH
Confidence 1 245677899999999754444444444
No 385
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.06 E-value=1.8 Score=47.29 Aligned_cols=72 Identities=11% Similarity=0.147 Sum_probs=47.6
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh----cCCCCEEEeec
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ----LNPYVSTKAYT 151 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~----lNp~V~v~~~~ 151 (986)
+|.|+|+|.+|+.+|..|+..|. .+++++|.+.- |++.....+.+ .....++....
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~-------------------~~~~~~~~l~~~~~~~~~~~~i~~t~ 62 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG-------------------IPQGKALDMYESGPVGLFDTKVTGSN 62 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS-------------------HHHHHHHHHHTTHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh-------------------HHHHHHHhHHhhhhcccCCcEEEECC
Confidence 79999999999999999998763 57999996431 22222212221 22344555433
Q ss_pred CCCCHhhhccccEEEEecC
Q psy7300 152 GELSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~ 170 (986)
+. ++ ++++|+||.|..
T Consensus 63 -d~-~~-l~~aDvViiav~ 78 (310)
T 1guz_A 63 -DY-AD-TANSDIVIITAG 78 (310)
T ss_dssp -CG-GG-GTTCSEEEECCS
T ss_pred -CH-HH-HCCCCEEEEeCC
Confidence 22 23 889999999974
No 386
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=88.05 E-value=0.85 Score=48.93 Aligned_cols=100 Identities=12% Similarity=0.173 Sum_probs=58.9
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.-.. + ...|+..+. .+. .+. ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~l~R~~~~~----~---------~~~~~~~~~-~l~--~~~--v~ 59 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH------PTFLLVRESTAS----S---------NSEKAQLLE-SFK--ASG--AN 59 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC------CEEEECCCCCTT----T---------THHHHHHHH-HHH--TTT--CE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC------CEEEEECCcccc----c---------CHHHHHHHH-HHH--hCC--CE
Confidence 468999997 9999999999999986 777765432100 0 011222211 111 233 34
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCCCH--HHHHHHHHHHHHcC-Cc
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALDNV--EARIYMDRRCVYSR-KP 588 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~--~ar~~l~~~c~~~~-~p 588 (986)
.+..++.+.. . + ...++++|+||++.... ..-..+-+.|.+.+ ++
T Consensus 60 ~v~~D~~d~~-~-l-~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 60 IVHGSIDDHA-S-L-VEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp EECCCTTCHH-H-H-HHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred EEEeccCCHH-H-H-HHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 4555554321 1 1 35678899999987642 23345566777776 54
No 387
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=88.05 E-value=1.6 Score=46.39 Aligned_cols=35 Identities=26% Similarity=0.500 Sum_probs=30.3
Q ss_pred HhhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q psy7300 72 RMASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDT 107 (986)
Q Consensus 72 kL~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~ 107 (986)
.|++++|+|.| .||+|.++++.|+..|. ++.+++.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r 64 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCAR 64 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEC
Confidence 57788999998 68999999999999997 5887774
No 388
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=88.05 E-value=0.36 Score=53.93 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=30.5
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.||+|||+|..|..+|-.|++.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~------~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI------KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------CEEEEecC
Confidence 4689999999999999999999999 89999865
No 389
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=88.04 E-value=0.77 Score=49.36 Aligned_cols=84 Identities=18% Similarity=0.278 Sum_probs=0.0
Q ss_pred HhcCcEEEEe-cChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVG-AGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvG-aGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+...||.|+| +|.+|.++++.+... |+++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~--------------------------------------------------~~~e 34 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAA--------------------------------------------------PDAT 34 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHC--------------------------------------------------TTEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhC--------------------------------------------------CCCE
Q ss_pred EEEEEcccCCc------------------cccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCC
Q psy7300 539 ITYHENRVGPE------------------TEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGT 597 (986)
Q Consensus 539 i~~~~~~v~~~------------------~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~ 597 (986)
+.+.-..-.+. ..+. ++.+..+|+||+++ .+++-...-..|.++++|+| .||.|+
T Consensus 35 Lv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl--~~ll~~~DVVIDfT-~p~a~~~~~~~al~~G~~vV-igTTG~ 107 (272)
T 4f3y_A 35 LVGALDRTGSPQLGQDAGAFLGKQTGVALTDDI--ERVCAEADYLIDFT-LPEGTLVHLDAALRHDVKLV-IGTTGF 107 (272)
T ss_dssp EEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCH--HHHHHHCSEEEECS-CHHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred EEEEEEecCcccccccHHHHhCCCCCceecCCH--HHHhcCCCEEEEcC-CHHHHHHHHHHHHHcCCCEE-EECCCC
No 390
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=87.97 E-value=0.74 Score=49.39 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=28.6
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 66 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGY------SVVITGRR 66 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 4578889999986 8899999999999998 89998754
No 391
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.95 E-value=0.56 Score=52.85 Aligned_cols=73 Identities=21% Similarity=0.196 Sum_probs=0.0
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhh-cCCCCEEEeec
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQ-LNPYVSTKAYT 151 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~-lNp~V~v~~~~ 151 (986)
+..++|+|+|+|++|..+++.+...|. +++++| +...-.+.+.+ +...+.+....
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d-----------------------~~~~~l~~~~~~~g~~~~~~~~~ 221 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLD-----------------------INIDKLRQLDAEFCGRIHTRYSS 221 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE-----------------------SCHHHHHHHHHHTTTSSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEe-----------------------CCHHHHHHHHHhcCCeeEeccCC
Q ss_pred CCCCHhhhccccEEEEec
Q psy7300 152 GELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~ 169 (986)
..--.+.+.++|+||.|.
T Consensus 222 ~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 222 AYELEGAVKRADLVIGAV 239 (377)
T ss_dssp HHHHHHHHHHCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECC
No 392
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=87.95 E-value=0.66 Score=48.95 Aligned_cols=98 Identities=14% Similarity=0.185 Sum_probs=59.1
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
++|+|.|+ |+||+.+++.|+..|. +++++|.+.-. .+. + .++.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~--~~~--------------------------~--~~~~ 46 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH------EVRLSDIVDLG--AAE--------------------------A--HEEI 46 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE------EEEECCSSCCC--CCC--------------------------T--TEEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC------EEEEEeCCCcc--ccC--------------------------C--CccE
Confidence 47999998 9999999999998886 78887754311 000 1 1333
Q ss_pred EEcccCCccccccccccccCCCEEEEcCC-------------CHHHHHHHHHHHHHcCC-cEEEEeecCCcc
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALD-------------NVEARIYMDRRCVYSRK-PLLESGTLGTKG 599 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~D-------------n~~ar~~l~~~c~~~~~-pli~~g~~G~~G 599 (986)
+..++.+.. .+ ...++++|+||++.. |..+-..+-+.|...++ .+|..++.+..|
T Consensus 47 ~~~Dl~d~~-~~--~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~ 115 (267)
T 3ay3_A 47 VACDLADAQ-AV--HDLVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIG 115 (267)
T ss_dssp CCCCTTCHH-HH--HHHHTTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGST
T ss_pred EEccCCCHH-HH--HHHHcCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhC
Confidence 334443211 11 345677888887742 22333455667777665 467766654433
No 393
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.95 E-value=0.75 Score=49.14 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=30.5
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 39 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGA------NVTITGRS 39 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 356788888885 8999999999999998 89988754
No 394
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=87.94 E-value=0.5 Score=49.91 Aligned_cols=35 Identities=26% Similarity=0.488 Sum_probs=30.6
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 45 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA------TVAIADLD 45 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999986 7899999999999998 89988755
No 395
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=87.93 E-value=2.4 Score=46.18 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=28.8
Q ss_pred hhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 73 MASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 73 L~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d 108 (986)
+...+|||.| .|++|+.+++.|+..| .+++++|..
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 4457899999 6899999999999999 478888864
No 396
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=87.92 E-value=1.1 Score=48.66 Aligned_cols=36 Identities=19% Similarity=0.087 Sum_probs=28.6
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+-.+++|||.|+ |.||.++++.|+..|. +++++|.+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY------RVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC------eEEEEeCC
Confidence 346788999996 8999999999999987 88888854
No 397
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=87.90 E-value=0.98 Score=48.96 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=27.7
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
++|+|.|+ |.||+.+++.|+..|. +++++|..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL------SVVVVDNL 34 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 47999986 9999999999999987 88888753
No 398
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=87.86 E-value=0.63 Score=50.08 Aligned_cols=36 Identities=14% Similarity=0.288 Sum_probs=31.0
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~------~V~~~~r~ 59 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA------QCVIASRK 59 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788999996 8999999999999997 88888753
No 399
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=87.86 E-value=0.83 Score=48.10 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=29.4
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcC---CCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMG---VGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~G---v~~g~~g~i~ivD~D 500 (986)
..+.+++|+|.|+ |+||.++++.|+..| . +++++|.+
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~------~V~~~~r~ 57 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQ------HLFTTCRN 57 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCS------EEEEEESC
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCc------EEEEEecC
Confidence 3467788999986 899999999999988 5 88888754
No 400
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=87.85 E-value=1.7 Score=45.27 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=28.1
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
||.|||+|.+|..++++|...|+.=+.++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 79999999999999999998888545788875
No 401
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=87.84 E-value=1.6 Score=46.72 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=60.4
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcC-CCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMG-VGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~G-v~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
.++|+|.|+ |++|..+++.|+..| . ++++++.+.- +.++ +.+.. +. +
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~------~V~~~~R~~~-----------------~~~~----~~l~~--~~--~ 53 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF------KVRVVTRNPR-----------------KKAA----KELRL--QG--A 53 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS------EEEEEESCTT-----------------SHHH----HHHHH--TT--C
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc------eEEEEEcCCC-----------------CHHH----HHHHH--CC--C
Confidence 468999998 999999999999988 5 7888764321 0111 12221 23 3
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCCH---------HHHHHHHHHHHHcCCc-EEEEeecC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDNV---------EARIYMDRRCVYSRKP-LLESGTLG 596 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~---------~ar~~l~~~c~~~~~p-li~~g~~G 596 (986)
+.+..++.+.. .. ...++++|+||++.... ..-..+-+.|.+.++. +|.+++.+
T Consensus 54 ~~~~~D~~d~~-~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~ 117 (299)
T 2wm3_A 54 EVVQGDQDDQV-IM--ELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117 (299)
T ss_dssp EEEECCTTCHH-HH--HHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred EEEEecCCCHH-HH--HHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence 44555554321 11 35678899999987532 1223445566667764 55554433
No 402
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.83 E-value=1.6 Score=46.45 Aligned_cols=98 Identities=11% Similarity=0.086 Sum_probs=0.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCCH
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELSE 156 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~~ 156 (986)
+|+|+|+|.+|+.+|..|...|. .++++|.+.-....+........ ........-+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~~~~~~----------------------~~~~~~~~~~~ 58 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGS----------------------IFNESLTANDP 58 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSC----------------------EEEEEEEESCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEEcCCCc----------------------eeeeeeeecCc
Q ss_pred hhhccccEEEEecCCHHHHHHHHHHHHHcC-CcEEEeecccc
Q psy7300 157 AFIKKFRVVVLTNSTYDEQLAISQITHAND-IALIIADTRGL 197 (986)
Q Consensus 157 ~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~-ip~I~~~~~G~ 197 (986)
+.+.++|+||.|..+......+..+....+ -..|...+.|+
T Consensus 59 ~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 59 DFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp HHHHTCSEEEECSCGGGHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred cccCCCCEEEEEecHHhHHHHHHHHHhhCCCCCEEEEecCCC
No 403
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=87.81 E-value=0.36 Score=51.46 Aligned_cols=87 Identities=13% Similarity=0.193 Sum_probs=56.0
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 77 DVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 77 ~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
+|||.| .|.+|+++++.|...|. +++.++... .|+.. .+.+.+.+++..
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~D~~d--~~~~~~~~~~~~------------- 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKL--------------LDITN--ISQVQQVVQEIR------------- 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTT--------------SCTTC--HHHHHHHHHHHC-------------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccc--------------cCCCC--HHHHHHHHHhcC-------------
Confidence 799999 58999999999999985 788888622 22221 123333343333
Q ss_pred HhhhccccEEEEecC---------CH--------HHHHHHHHHHHHcCCcEEEeecccceE
Q psy7300 156 EAFIKKFRVVVLTNS---------TY--------DEQLAISQITHANDIALIIADTRGLFA 199 (986)
Q Consensus 156 ~~~l~~~dvVI~~~~---------~~--------~~~~~i~~~c~~~~ip~I~~~~~G~~G 199 (986)
+|+||.+.. +. .....+.+.|++.++++|+.++.+.||
T Consensus 57 ------~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 57 ------PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQ 111 (287)
T ss_dssp ------CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred ------CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcC
Confidence 344444321 11 123456778888888999988877665
No 404
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.77 E-value=1.1 Score=52.23 Aligned_cols=37 Identities=19% Similarity=0.396 Sum_probs=29.5
Q ss_pred HHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q psy7300 70 MRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDT 107 (986)
Q Consensus 70 q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~ 107 (986)
...|.+++|.|||+|.+|+.+|.+|+..|. .++++|.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r 46 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNR 46 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeC
Confidence 346788999999999999999999999997 6888875
No 405
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=87.77 E-value=1.6 Score=46.96 Aligned_cols=29 Identities=21% Similarity=0.406 Sum_probs=23.6
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q psy7300 76 SDVLISG-LGGLGVEIAKNVILSGVKSVTLHD 106 (986)
Q Consensus 76 s~VlIiG-~gglGseiaknLvl~GVg~itlvD 106 (986)
++|||.| .|++|+++++.|...| .++.++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 3799999 5889999999999999 455554
No 406
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.77 E-value=1.5 Score=46.88 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=45.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
.+|.|||+|.+|..++++|.. |. +++++|.+. .+++.+.+. .+.+ .. .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~-------------------~~~~~~~~~------g~~~--~~---~ 49 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTF-------------------EKALRHQEE------FGSE--AV---P 49 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSST-------------------HHHHHHHHH------HCCE--EC---C
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCH-------------------HHHHHHHHC------CCcc--cC---H
Confidence 379999999999999999999 87 588887532 233333222 1111 11 3
Q ss_pred HhhhccccEEEEecCCHH
Q psy7300 156 EAFIKKFRVVVLTNSTYD 173 (986)
Q Consensus 156 ~~~l~~~dvVI~~~~~~~ 173 (986)
.+.+.++|+||.|..+..
T Consensus 50 ~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 50 LERVAEARVIFTCLPTTR 67 (289)
T ss_dssp GGGGGGCSEEEECCSSHH
T ss_pred HHHHhCCCEEEEeCCChH
Confidence 456678999999997664
No 407
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.76 E-value=1.4 Score=46.77 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=27.5
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDT 107 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~ 107 (986)
+|.|||+|.+|+.+++.|...|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 69999999999999999999997 7888875
No 408
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=87.75 E-value=0.68 Score=50.02 Aligned_cols=36 Identities=28% Similarity=0.407 Sum_probs=31.0
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 67 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA------TIVFNDIN 67 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 367888999986 8999999999999997 88888754
No 409
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.74 E-value=0.39 Score=52.47 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=28.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
.+|+|+|+|++|+.+|..|..+|. .+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999996 78888864
No 410
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=87.72 E-value=2.6 Score=44.63 Aligned_cols=93 Identities=16% Similarity=0.213 Sum_probs=58.5
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 77 DVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 77 ~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
+|+|.| .|.+|+.+++.|...+-.++++++.+.-.... +. .+.+ +....+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----------------------~~--~~~v--~~~~~D~~ 54 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----------------------DW--RGKV--SVRQLDYF 54 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----------------------GG--BTTB--EEEECCTT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----------------------hh--hCCC--EEEEcCCC
Confidence 699999 58899999999988734467777654321110 10 1223 33334442
Q ss_pred -H----hhhccccEEEEecCC-------HHHHHHHHHHHHHcCCc-EEEeeccc
Q psy7300 156 -E----AFIKKFRVVVLTNST-------YDEQLAISQITHANDIA-LIIADTRG 196 (986)
Q Consensus 156 -~----~~l~~~dvVI~~~~~-------~~~~~~i~~~c~~~~ip-~I~~~~~G 196 (986)
+ +.++++|+||.+... ......+-+.|++.+++ +|..++.|
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 2 356789999987542 13334677888888875 77777654
No 411
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=87.71 E-value=1.3 Score=45.92 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=28.7
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEe
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTD 498 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD 498 (986)
+.+++|+|.|+ |+||.++++.|+..|. +++++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~------~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA------NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC------EEEEEc
Confidence 56788999986 8999999999999997 888874
No 412
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.64 E-value=2.4 Score=45.11 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=56.3
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
++|.|||+|.+|+.+++.|+..|.. .+++++|.+. .+.+. +.+.. +.....
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~----~~V~~~d~~~-------------------~~~~~----~~~~g--~~~~~~ 52 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFK----GKIYGYDINP-------------------ESISK----AVDLG--IIDEGT 52 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCC----SEEEEECSCH-------------------HHHHH----HHHTT--SCSEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCC----cEEEEEeCCH-------------------HHHHH----HHHCC--Cccccc
Confidence 4799999999999999999998862 3788887542 11111 11211 110000
Q ss_pred EcccCCcccccccccccc-CCCEEEEcCCCHHHHHHHHHHHHH--cCCcEEEEe
Q psy7300 543 ENRVGPETEKVYDDLFFE-SLDGIANALDNVEARIYMDRRCVY--SRKPLLESG 593 (986)
Q Consensus 543 ~~~v~~~~~~~~~~~f~~-~~DvVi~a~Dn~~ar~~l~~~c~~--~~~pli~~g 593 (986)
.. ..+.+. ++|+|+.|+-....+..+.++... .+..+++.+
T Consensus 53 -~~---------~~~~~~~~aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~~~ 96 (281)
T 2g5c_A 53 -TS---------IAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQG 96 (281)
T ss_dssp -SC---------GGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CC---------HHHHhcCCCCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 00 024567 899999999877666666655432 345566644
No 413
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=87.60 E-value=0.75 Score=47.90 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=30.9
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~------~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA------KVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788999986 8999999999999997 88888754
No 414
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=87.58 E-value=0.34 Score=52.95 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=31.7
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
....+|.|||+|.+|+.++++|+..|. .++++|.+.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~------~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGF------KVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCC------eEEEEeCCH
Confidence 344689999999999999999999998 899998764
No 415
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=87.56 E-value=0.36 Score=51.67 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=26.9
Q ss_pred cEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 464 KYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 464 ~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
+|+|.|+ |.||+.+++.|+ .|. +++++|.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~------~V~~~~r~~ 33 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVG------NLIALDVHS 33 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTS------EEEEECTTC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCC------eEEEecccc
Confidence 7999997 999999999999 786 888887654
No 416
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=87.56 E-value=1.2 Score=48.97 Aligned_cols=73 Identities=16% Similarity=0.060 Sum_probs=54.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILS-GVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~-GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
...+|+|||+|+.|..+++.|... ++.+++++|.+ ..|++.+++.+.... +.+. . .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~-~ 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-V-Q 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-E-C
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-E-C
Confidence 467899999999999999999874 78999999853 247777777776532 3333 2 2
Q ss_pred CCCHhhhccccEEEEecCC
Q psy7300 153 ELSEAFIKKFRVVVLTNST 171 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~ 171 (986)
++ ++.+ ++|+||.|+.+
T Consensus 181 ~~-~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 PA-EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CH-HHHT-SSSEEEECCCC
T ss_pred CH-HHHh-CCCEEEEeeCC
Confidence 22 3566 89999999975
No 417
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.56 E-value=0.66 Score=49.70 Aligned_cols=36 Identities=28% Similarity=0.462 Sum_probs=30.8
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~------~V~~~~r~ 62 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGC------HVLCADID 62 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 478888999986 7999999999999998 89998754
No 418
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=87.55 E-value=1.3 Score=46.52 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=28.0
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 35 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF------AVAIADYN 35 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467889985 8999999999999997 88888743
No 419
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=87.54 E-value=1.1 Score=48.04 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=0.0
Q ss_pred hcCcEEEEec-ChhhHHHHHHHH-HcCCCcCCCCeEE-EEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCc
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFA-MMGVGAGPGGQIF-VTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNV 537 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa-~~Gv~~g~~g~i~-ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~ 537 (986)
++.||+|+|| |.+|..+++.+. .-|+ .++ ++|.+.-...--.-.-+..-...|
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~------elva~~d~~~~~~~g~d~~~~~g~~~~~------------------ 59 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGV------QLGAALEREGSSLLGSDAGELAGAGKTG------------------ 59 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTE------ECCCEECCTTCTTCSCCTTCSSSSSCCS------------------
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecCchhhhhhhHHHHcCCCcCC------------------
Q ss_pred eEEEEEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCC
Q psy7300 538 NITYHENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGT 597 (986)
Q Consensus 538 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~ 597 (986)
......+ ++.+.++|+||+++ .+++-..+-..|.++|+|++-+-+ |+
T Consensus 60 --v~~~~dl---------~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTt-G~ 106 (273)
T 1dih_A 60 --VTVQSSL---------DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTT-GF 106 (273)
T ss_dssp --CCEESCS---------TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEECCC-CC
T ss_pred --ceecCCH---------HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECC-CC
No 420
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=87.52 E-value=2.6 Score=45.03 Aligned_cols=103 Identities=19% Similarity=0.273 Sum_probs=61.9
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 75 SSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 75 ~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
..+|+|.|+ |.+|+.+++.|+..| .++++++.+.-... ...|++.+ +.+. .+.++ ....+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~-------------~~~~~~~~-~~l~--~~~v~--~v~~D 64 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASS-------------NSEKAQLL-ESFK--ASGAN--IVHGS 64 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTT-------------THHHHHHH-HHHH--TTTCE--EECCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCccccc-------------CHHHHHHH-HHHH--hCCCE--EEEec
Confidence 368999996 899999999999999 46777765321000 01132221 1222 23443 34444
Q ss_pred CC-H----hhhccccEEEEecCCH--HHHHHHHHHHHHcC-CcEEEeeccc
Q psy7300 154 LS-E----AFIKKFRVVVLTNSTY--DEQLAISQITHAND-IALIIADTRG 196 (986)
Q Consensus 154 ~~-~----~~l~~~dvVI~~~~~~--~~~~~i~~~c~~~~-ip~I~~~~~G 196 (986)
++ + +.++++|+||.+.... .....+.+.|++.+ ++-+..+++|
T Consensus 65 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g 115 (308)
T 1qyc_A 65 IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFG 115 (308)
T ss_dssp TTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCS
T ss_pred cCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeecccc
Confidence 42 2 3567899999887532 33456778888887 7655433333
No 421
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=87.49 E-value=0.48 Score=50.69 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=55.5
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 77 DVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 77 ~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
+|+|.|+ |.+|+.+++.|. .| .+++.++.... + -..|+... +.+.+.++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~~--------~--~~~D~~d~--~~~~~~~~~~~------------- 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHSK--------E--FCGDFSNP--KGVAETVRKLR------------- 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTCS--------S--SCCCTTCH--HHHHHHHHHHC-------------
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEeccccc--------c--ccccCCCH--HHHHHHHHhcC-------------
Confidence 6999996 889999999999 78 57888876530 1 12333321 22233333322
Q ss_pred HhhhccccEEEEecC---------C--------HHHHHHHHHHHHHcCCcEEEeecccceE
Q psy7300 156 EAFIKKFRVVVLTNS---------T--------YDEQLAISQITHANDIALIIADTRGLFA 199 (986)
Q Consensus 156 ~~~l~~~dvVI~~~~---------~--------~~~~~~i~~~c~~~~ip~I~~~~~G~~G 199 (986)
+|+||.+.. + ......+.+.|++.++.||+.++.+.+|
T Consensus 55 ------~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~ 109 (299)
T 1n2s_A 55 ------PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP 109 (299)
T ss_dssp ------CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSC
T ss_pred ------CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEe
Confidence 444444321 1 1223466678888888899988887765
No 422
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=87.43 E-value=0.65 Score=49.66 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=30.6
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 62 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA------RVFICARD 62 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 66788999986 8999999999999997 88888754
No 423
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=87.43 E-value=1.3 Score=46.57 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=29.8
Q ss_pred HhcCcEEEEecC-h--hhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAG-A--IGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaG-g--iG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+++++|+|.|++ + ||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~------~V~~~~r~ 42 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA------RLIFTYAG 42 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC------EEEEecCc
Confidence 567889999974 4 99999999999998 88888754
No 424
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.43 E-value=1.5 Score=48.45 Aligned_cols=99 Identities=16% Similarity=0.154 Sum_probs=0.0
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEe---
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKA--- 149 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~--- 149 (986)
|+..+|+|+|+|.+|+.+|..|...| ..++++| |.....+.+++.. .+.+..
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~~-----------------------r~~~~~~~~~~~~-~~~~~~~~~ 56 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKG-QSVLAWD-----------------------IDAQRIKEIQDRG-AIIAEGPGL 56 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC-----------------------SCHHHHHHHHHHT-SEEEESSSC
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCC-CEEEEEe-----------------------CCHHHHHHHHhcC-CeEEecccc
Q ss_pred -------ecCCCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 150 -------YTGELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 150 -------~~~~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
....-.++.+.++|+||.|..+......+..+.....-.-+.....|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 57 AGTAHPDLLTSDIGLAVKDADVILIVVPAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp CEEECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred ccccccceecCCHHHHHhcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCC
No 425
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.42 E-value=1.2 Score=48.67 Aligned_cols=38 Identities=24% Similarity=0.262 Sum_probs=32.8
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.+|.+++|+|.|+ ||||.++++.|+..|. +++++|.+.
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~------~Vv~~~~~~ 80 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGA------DIVAIDLCR 80 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEECCC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------eEEEEeccc
Confidence 4678888999986 8999999999999998 899998653
No 426
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.41 E-value=1.4 Score=52.33 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=64.8
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
.+|+|+|+|-+|..+++.|...|. .++++|.|.-....+. ..+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~------~v~vid~d~~~~~~~~-------------------------------~~i 391 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV------PFILIDRQESPVCNDH-------------------------------VVV 391 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------CEEEEESSCCSSCCSS-------------------------------CEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC------CEEEEECChHHHhhcC-------------------------------CEE
Confidence 899999999999999999999998 8999998863322211 122
Q ss_pred EcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCc
Q psy7300 543 ENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKP 588 (986)
Q Consensus 543 ~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~p 588 (986)
..+.. .++.+...=.+++|.|+.++++.++...+...+++.+.+
T Consensus 392 ~gD~t--~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 392 YGDAT--VGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp ESCSS--SSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred EeCCC--CHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 22222 122333445689999999999999888888899888754
No 427
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=87.41 E-value=2.1 Score=46.13 Aligned_cols=99 Identities=14% Similarity=0.125 Sum_probs=59.2
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCC-cHHHHHHHHHHhhCCCceE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQ-PKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~-~Ka~~a~~~l~~~np~~~i 539 (986)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.- +-.. .|+..+.. +. .+. +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~--------------~~~~~~~~~~l~~-~~--~~~--v 58 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH------PTFIYARPLT--------------PDSTPSSVQLREE-FR--SMG--V 58 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC------CEEEEECCCC--------------TTCCHHHHHHHHH-HH--HTT--C
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC------cEEEEECCcc--------------cccChHHHHHHHH-hh--cCC--c
Confidence 467999997 9999999999999987 7888764320 0000 12222211 11 133 4
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCCH--HHHHHHHHHHHHcC-Cc
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDNV--EARIYMDRRCVYSR-KP 588 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~--~ar~~l~~~c~~~~-~p 588 (986)
+.+..++.+.. .+ ...++++|+||++.... ..-..+-+.|.+.+ +.
T Consensus 59 ~~v~~D~~d~~-~l--~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (321)
T 3c1o_A 59 TIIEGEMEEHE-KM--VSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIK 107 (321)
T ss_dssp EEEECCTTCHH-HH--HHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCC
T ss_pred EEEEecCCCHH-HH--HHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCcc
Confidence 44555554321 11 45678999999987642 23345556677766 44
No 428
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=87.39 E-value=1.3 Score=46.46 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=28.1
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 35 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF------DIAVADLP 35 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC------EEEEEECG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467888885 8999999999999998 88888754
No 429
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=87.38 E-value=0.72 Score=48.56 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=30.6
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 38 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA------RVVLADVL 38 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999997 8999999999999998 88888754
No 430
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=87.35 E-value=0.7 Score=48.77 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=29.7
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~------~v~~~~r 53 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA------SVVVNYG 53 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 56788999986 8999999999999997 8888875
No 431
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.31 E-value=0.67 Score=50.04 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=27.7
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+.+++++|+|+||+|..+++.|+..| +++++|.
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-------~V~v~~r 158 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-------NIIIANR 158 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-------EEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-------CEEEEEC
Confidence 56789999999999999999998653 5777764
No 432
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.26 E-value=1.6 Score=47.07 Aligned_cols=95 Identities=14% Similarity=0.141 Sum_probs=0.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEe-------
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKA------- 149 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~------- 149 (986)
+|+|||+|.+|+.+|..|...|. +++++| |.....+.+++. ...+..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-----------------------r~~~~~~~~~~~--g~~~~~~~~~~~~ 58 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGN-DVTLID-----------------------QWPAHIEAIRKN--GLIADFNGEEVVA 58 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEC-----------------------SCHHHHHHHHHH--CEEEEETTEEEEE
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-cEEEEE-----------------------CCHHHHHHHHhC--CEEEEeCCCeeEe
Q ss_pred -ecCCCCHhhhc---cccEEEEecCCHHHHHHHHHHHHHcC-CcEEEeecccc
Q psy7300 150 -YTGELSEAFIK---KFRVVVLTNSTYDEQLAISQITHAND-IALIIADTRGL 197 (986)
Q Consensus 150 -~~~~~~~~~l~---~~dvVI~~~~~~~~~~~i~~~c~~~~-ip~I~~~~~G~ 197 (986)
....-+.+... ++|+||.|..+......+..+....+ -..|...+.|+
T Consensus 59 ~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~ 111 (316)
T 2ew2_A 59 NLPIFSPEEIDHQNEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGL 111 (316)
T ss_dssp CCCEECGGGCCTTSCCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSS
T ss_pred cceeecchhhcccCCCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCC
No 433
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=87.26 E-value=0.55 Score=49.56 Aligned_cols=35 Identities=20% Similarity=0.361 Sum_probs=29.8
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
|.+++++|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 38 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA------TVYITGRH 38 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56778888885 8999999999999997 88888754
No 434
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.25 E-value=0.87 Score=49.25 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=30.1
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 59 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA------QVTITGRN 59 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788888886 8999999999999998 88888754
No 435
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=87.21 E-value=0.42 Score=53.82 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=35.5
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
+|...||+|+|+|+.|..+++.|+.+|+ ++|+++|.+-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga-----~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGA-----TKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCC-----CeEEEEECCC
Confidence 6788999999999999999999999998 7999999874
No 436
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.20 E-value=1.3 Score=47.97 Aligned_cols=32 Identities=25% Similarity=0.523 Sum_probs=28.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
.+|.|||+|.+|..++++|...|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 78888853
No 437
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=87.19 E-value=1.3 Score=47.72 Aligned_cols=35 Identities=14% Similarity=0.157 Sum_probs=28.6
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEe
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTD 498 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD 498 (986)
..|.+++++|.|+ ||||.++++.|+..|. +++++|
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~ 40 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGY------AVCLHY 40 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEc
Confidence 3567788888885 8999999999999998 888887
No 438
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=87.17 E-value=0.54 Score=55.12 Aligned_cols=92 Identities=18% Similarity=0.402 Sum_probs=58.1
Q ss_pred CccchhhhccCHHHH------------------HHHhcCcEEEEecChhhHHHHHHHHH----cCCCcC-CCCeEEEEeC
Q psy7300 443 SRYEGQVAIFGKNFQ------------------EKLGKLKYFVVGAGAIGCELLKNFAM----MGVGAG-PGGQIFVTDM 499 (986)
Q Consensus 443 ~rydrqi~~~G~~~q------------------~~L~~~~VlvvGaGgiG~e~lknLa~----~Gv~~g-~~g~i~ivD~ 499 (986)
+||...+.+|-.+.| ++|.+.||++.|||+.|+.+++.|+. .|+.-. ..++|.++|.
T Consensus 283 ~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~ 362 (605)
T 1o0s_A 283 DKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDI 362 (605)
T ss_dssp HHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEET
T ss_pred HHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEEC
Confidence 455556666655544 57899999999999999999999998 564100 0268999997
Q ss_pred Ccccc---ccCcc-c-cCcCCC-CCCCcHHHHHHHHHHhhCCCceE
Q psy7300 500 DLIEK---SNLNR-Q-FLFRPH-DVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 500 D~Ie~---sNLnR-q-flf~~~-diG~~Ka~~a~~~l~~~np~~~i 539 (986)
.-+-. .+|+. | .+-+.. +.| .+.+.++...|++=|
T Consensus 363 ~Gli~~~r~~l~~~k~~~A~~~~~~~-----~L~eav~~vkpdVlI 403 (605)
T 1o0s_A 363 DGLVTKNRKEMNPRHVQFAKDMPETT-----SILEVIRAARPGALI 403 (605)
T ss_dssp TEECBTTCSSCCGGGTTTCBSSCCCC-----CHHHHHHHHCCSEEE
T ss_pred CCceeCCCCCchHHHHHHHhhcCCCC-----CHHHHHhhcCCCEEE
Confidence 64422 23443 1 222221 122 366777777776544
No 439
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.16 E-value=0.98 Score=49.73 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=61.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
+.+|+|+|+|.+|..+++.|...|. ++++|.|. .+++ +++ ..+ .+...+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~-------------------~~~~-----~~~--~~~--~~i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRKK-----VLR--SGA--NFVHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGG-------------------GHHH-----HHH--TTC--EEEESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCCh-------------------hhhh-----HHh--CCc--EEEEeCC
Confidence 5689999999999999999999997 89998643 1332 222 223 3333333
Q ss_pred -CHhh-----hccccEEEEecCCHHHHHHHHHHHHHcCCc-EEEee
Q psy7300 155 -SEAF-----IKKFRVVVLTNSTYDEQLAISQITHANDIA-LIIAD 193 (986)
Q Consensus 155 -~~~~-----l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip-~I~~~ 193 (986)
+++. ++++|.||.+.++.+.-..+...+++.+.+ .|.+.
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCCCCeEEEE
Confidence 3333 467899999988777777777888887654 44443
No 440
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.09 E-value=1.3 Score=47.47 Aligned_cols=87 Identities=20% Similarity=0.215 Sum_probs=0.0
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCC
Q psy7300 77 DVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELS 155 (986)
Q Consensus 77 ~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~ 155 (986)
+|.|||+ |.+|+.+++.|...|. +++++| |.....+.+.+.. ....-.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~-----------------------r~~~~~~~~~~~g-------~~~~~~ 61 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAH-HLAAIE-----------------------IAPEGRDRLQGMG-------IPLTDG 61 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSS-EEEEEC-----------------------CSHHHHHHHHHTT-------CCCCCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEEE-----------------------CCHHHHHHHHhcC-------CCcCCH
Q ss_pred HhhhccccEEEEecCCHHHHHHHHHHHH--HcCCcEEEeec
Q psy7300 156 EAFIKKFRVVVLTNSTYDEQLAISQITH--ANDIALIIADT 194 (986)
Q Consensus 156 ~~~l~~~dvVI~~~~~~~~~~~i~~~c~--~~~ip~I~~~~ 194 (986)
.+.+.++|+||.|..+......+.++.. ..+..+|++.+
T Consensus 62 ~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv~~s~ 102 (286)
T 3c24_A 62 DGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLILDA 102 (286)
T ss_dssp SGGGGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEESCS
T ss_pred HHHhcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEEECCC
No 441
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=87.06 E-value=1.2 Score=47.67 Aligned_cols=34 Identities=24% Similarity=0.187 Sum_probs=28.9
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
+.+++|+|.|+ ||||.++++.|+..|. ++.+++.
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~r 76 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS------HVICISR 76 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS------EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC------EEEEEcC
Confidence 56788999986 8999999999999887 7887764
No 442
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=87.05 E-value=0.77 Score=48.82 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=30.4
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~r~ 67 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA------DVAIWYNS 67 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC------EEEEEESS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 67788999985 7999999999999997 88888753
No 443
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=87.05 E-value=1.1 Score=47.87 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=28.4
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..|. ++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~------~V~~~~r~ 54 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW------SLVLTGRR 54 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3455 77888886 7999999999999998 88888754
No 444
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=87.03 E-value=1.1 Score=54.46 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=28.7
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
..+.+++|+|.|+ |.||+++++.|+..|. +++++|.
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~------~V~~~~r 43 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGY------DCVVADN 43 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcC------EEEEEEC
Confidence 3467789999996 9999999999999987 8888874
No 445
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=86.99 E-value=0.89 Score=47.51 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=28.0
Q ss_pred hcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 461 GKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 461 ~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
.+++++|.|+ ||||.++++.|+..|. ++.++|.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY------NVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeC
Confidence 4567888885 8999999999999998 8888774
No 446
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.97 E-value=1.4 Score=50.94 Aligned_cols=40 Identities=33% Similarity=0.404 Sum_probs=33.3
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLN 508 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLn 508 (986)
.||.|||+|.+|..++.+|+..|. +++++|.|.=....|+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~------~V~~~D~~~~~v~~l~ 42 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA------NVRCIDTDRNKIEQLN 42 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC------EEEEEECCHHHHHHHH
Confidence 589999999999999999999998 8999998753333333
No 447
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=86.90 E-value=2.3 Score=46.14 Aligned_cols=103 Identities=13% Similarity=0.292 Sum_probs=61.7
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhc-CCCCEEEeecC
Q psy7300 75 SSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQL-NPYVSTKAYTG 152 (986)
Q Consensus 75 ~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~l-Np~V~v~~~~~ 152 (986)
+.+|||.| .|++|.++++.|+..|. +++++|...-.. . ...+.+.+. .+. +..+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~----------------~---~~~~~~~~~~~~~--~~~~~~ 62 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSK----------------R---EAIARIEKITGKT--PAFHET 62 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSC----------------T---HHHHHHHHHHSCC--CEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcch----------------H---HHHHHHHhhcCCC--ceEEEe
Confidence 46899999 68999999999999996 677777533110 0 111222222 223 333444
Q ss_pred CCC-H----hhhc--cccEEEEecCC-----------------HHHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 153 ELS-E----AFIK--KFRVVVLTNST-----------------YDEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 153 ~~~-~----~~l~--~~dvVI~~~~~-----------------~~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
++. . +.++ +.|+||.+... ......+.+.|++.++ .+|++++.+.+|
T Consensus 63 Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 63 DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG 134 (341)
T ss_dssp CTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred ecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence 442 2 2344 68888876531 1112345567888776 588887777665
No 448
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=86.89 E-value=1.8 Score=45.66 Aligned_cols=74 Identities=19% Similarity=0.116 Sum_probs=47.3
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCCCH
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGELSE 156 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~~~ 156 (986)
+|.|||+|.+|..++++|...|. +++++|.+.. ..+++ .+.+. .+. .+ ..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~~~~~-----------------~~~~~----~~~~~--g~~-----~~-~~ 51 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRS-----------------PSTIE----RARTV--GVT-----ET-SE 51 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCC-----------------HHHHH----HHHHH--TCE-----EC-CH
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeCCccC-----------------HHHHH----HHHHC--CCc-----CC-HH
Confidence 69999999999999999999997 6777553110 01222 22222 222 11 24
Q ss_pred hhhccccEEEEecCCHHHHHHHHH
Q psy7300 157 AFIKKFRVVVLTNSTYDEQLAISQ 180 (986)
Q Consensus 157 ~~l~~~dvVI~~~~~~~~~~~i~~ 180 (986)
+.+.+.|+||.|..+......+..
T Consensus 52 ~~~~~aDvvi~~v~~~~~~~~~~~ 75 (264)
T 1i36_A 52 EDVYSCPVVISAVTPGVALGAARR 75 (264)
T ss_dssp HHHHTSSEEEECSCGGGHHHHHHH
T ss_pred HHHhcCCEEEEECCCHHHHHHHHH
Confidence 667899999999876544333433
No 449
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=86.89 E-value=2.6 Score=45.10 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=59.7
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEE
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNIT 540 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~ 540 (986)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.-. ....|+..+. .+. .+. ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~--------------~~~~~~~~~~-~~~--~~~--~~ 58 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH------PTYVLFRPEVV--------------SNIDKVQMLL-YFK--QLG--AK 58 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC------CEEEECCSCCS--------------SCHHHHHHHH-HHH--TTT--CE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC------cEEEEECCCcc--------------cchhHHHHHH-HHH--hCC--eE
Confidence 468999997 9999999999999986 78877643200 0001222211 111 233 34
Q ss_pred EEEcccCCccccccccccccCCCEEEEcCC------CHHHHHHHHHHHHHcC-Cc
Q psy7300 541 YHENRVGPETEKVYDDLFFESLDGIANALD------NVEARIYMDRRCVYSR-KP 588 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~~~f~~~~DvVi~a~D------n~~ar~~l~~~c~~~~-~p 588 (986)
.+..++.+.. .. ...++++|+||++.. |...-..+-+.|.+.+ +.
T Consensus 59 ~~~~D~~d~~-~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 59 LIEASLDDHQ-RL--VDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp EECCCSSCHH-HH--HHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred EEeCCCCCHH-HH--HHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 4555554321 11 356789999999865 3444456667787776 44
No 450
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=86.84 E-value=3.1 Score=45.62 Aligned_cols=37 Identities=19% Similarity=0.105 Sum_probs=31.7
Q ss_pred HHhhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 71 RRMASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 71 ~kL~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d 108 (986)
..|.+.+|||.| .|++|+.+++.|...|. ++++++..
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 356778999999 68999999999999996 78888864
No 451
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.83 E-value=1.8 Score=47.34 Aligned_cols=104 Identities=17% Similarity=0.188 Sum_probs=0.0
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
...+|+|+|+|++|+.+|..|+.+|. .++++ .+. ........+.+.-..|..........
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~------------------~~~~~i~~~g~~~~~~~~~~~~~~~~ 77 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARP------------------QHVQAIEATGLRLETQSFDEQVKVSA 77 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCH------------------HHHHHHHHHCEEEECSSCEEEECCEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcH------------------hHHHHHHhCCeEEEcCCCcEEEeeee
Q ss_pred C-CHhhhccccEEEEecCCHHHHHHHHHHHHHcC-CcEEEeecccc
Q psy7300 154 L-SEAFIKKFRVVVLTNSTYDEQLAISQITHAND-IALIIADTRGL 197 (986)
Q Consensus 154 ~-~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~-ip~I~~~~~G~ 197 (986)
. +.+.+..+|+||.|.-+......+..+....+ -..|.....|+
T Consensus 78 ~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi 123 (318)
T 3hwr_A 78 SSDPSAVQGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGV 123 (318)
T ss_dssp ESCGGGGTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSS
T ss_pred eCCHHHcCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCC
No 452
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.83 E-value=0.38 Score=49.76 Aligned_cols=71 Identities=15% Similarity=0.174 Sum_probs=45.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEE-EeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTL-HDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itl-vD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
.+|.|||+|.+|..+++.|...|. .+++ +|.+. .+++.+.+.+ . +.+.. -
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~r~~-------------------~~~~~l~~~~---g--~~~~~----~ 74 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI-PAIIANSRGP-------------------ASLSSVTDRF---G--ASVKA----V 74 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC-CEEEECTTCG-------------------GGGHHHHHHH---T--TTEEE----C
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCCH-------------------HHHHHHHHHh---C--CCccc----C
Confidence 589999999999999999999997 4655 55432 1233333222 1 11111 1
Q ss_pred CHhhhccccEEEEecCCHHHH
Q psy7300 155 SEAFIKKFRVVVLTNSTYDEQ 175 (986)
Q Consensus 155 ~~~~l~~~dvVI~~~~~~~~~ 175 (986)
+.+.+.+.|+||.|.......
T Consensus 75 ~~~~~~~aDvVilavp~~~~~ 95 (220)
T 4huj_A 75 ELKDALQADVVILAVPYDSIA 95 (220)
T ss_dssp CHHHHTTSSEEEEESCGGGHH
T ss_pred hHHHHhcCCEEEEeCChHHHH
Confidence 234578899999998654333
No 453
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=86.79 E-value=1.4 Score=47.60 Aligned_cols=80 Identities=23% Similarity=0.299 Sum_probs=0.0
Q ss_pred cEEEEe-cChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEEE
Q psy7300 464 KYFVVG-AGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITYH 542 (986)
Q Consensus 464 ~VlvvG-aGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~~ 542 (986)
||.|+| +|.+|..+++.+... |++++.+.
T Consensus 23 rV~V~Ga~GrMGr~i~~~v~~~--------------------------------------------------~~~eLvg~ 52 (288)
T 3ijp_A 23 RLTVVGANGRMGRELITAIQRR--------------------------------------------------KDVELCAV 52 (288)
T ss_dssp EEEESSTTSHHHHHHHHHHHTC--------------------------------------------------SSEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhC--------------------------------------------------CCCEEEEE
Q ss_pred EcccCCc-------------------cccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeecCC
Q psy7300 543 ENRVGPE-------------------TEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTLGT 597 (986)
Q Consensus 543 ~~~v~~~-------------------~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~G~ 597 (986)
-..-.+. ..+. ++.+...|+||+++ .+++-...-..|.++|+|+| .||.|+
T Consensus 53 vd~~~~~~~G~d~gel~G~~~~gv~v~~dl--~~ll~~aDVvIDFT-~p~a~~~~~~~~l~~Gv~vV-iGTTG~ 122 (288)
T 3ijp_A 53 LVRKGSSFVDKDASILIGSDFLGVRITDDP--ESAFSNTEGILDFS-QPQASVLYANYAAQKSLIHI-IGTTGF 122 (288)
T ss_dssp BCCTTCTTTTSBGGGGTTCSCCSCBCBSCH--HHHTTSCSEEEECS-CHHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred EecCCccccccchHHhhccCcCCceeeCCH--HHHhcCCCEEEEcC-CHHHHHHHHHHHHHcCCCEE-EECCCC
No 454
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.78 E-value=0.47 Score=50.85 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=30.9
Q ss_pred HhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 460 LGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 460 L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
+.+++|+|+|+||+|..++..|+..|. +++++|.+
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~------~V~v~~R~ 151 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC------AVTITNRT 151 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC------EEEEEECC
Confidence 467899999999999999999999995 89988644
No 455
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=86.78 E-value=2.1 Score=49.73 Aligned_cols=94 Identities=10% Similarity=0.078 Sum_probs=60.6
Q ss_pred cCcEEEEecChh-hHHHHHHHHHc--CC-CcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHH----HHHHHhh
Q psy7300 462 KLKYFVVGAGAI-GCELLKNFAMM--GV-GAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATA----AKAIKVM 533 (986)
Q Consensus 462 ~~~VlvvGaGgi-G~e~lknLa~~--Gv-~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a----~~~l~~~ 533 (986)
..||.|||+|++ |..++..|+.. ++ + .+|+++|-|. .|++.. ...+...
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~----~eV~L~Di~~-------------------e~~~~~~~~~~~~l~~~ 84 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPI----RKLKLYDNDK-------------------ERQDRIAGACDVFIREK 84 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCE----EEEEEECSCH-------------------HHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCC----CEEEEEeCCH-------------------HHHHHHHHHHHHHhccC
Confidence 468999999998 66788888887 66 3 5799998654 222222 2222345
Q ss_pred CCCceEEEEEcccCCccccccccccccCCCEEEEcCCCH--HHHHHHHHHHHHcCCc
Q psy7300 534 NPNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNV--EARIYMDRRCVYSRKP 588 (986)
Q Consensus 534 np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~--~ar~~l~~~c~~~~~p 588 (986)
....+|.+.... .+-++++|+||.++-.. +.|..-..+..++|+-
T Consensus 85 ~~~~~I~~t~D~----------~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~ 131 (472)
T 1u8x_X 85 APDIEFAATTDP----------EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVV 131 (472)
T ss_dssp CTTSEEEEESCH----------HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCC
T ss_pred CCCCEEEEECCH----------HHHHcCCCEEEEcCCCccccccchhhhhhhhcCcc
Confidence 556677663110 24468999999998763 3444556667777763
No 456
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.71 E-value=0.75 Score=53.56 Aligned_cols=125 Identities=10% Similarity=0.115 Sum_probs=70.5
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhh-CCCceEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVM-NPNVNIT 540 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~-np~~~i~ 540 (986)
.++|.|||+|.+|..++++|+..|. +++++|.+.=....+..+- ....+-.-+....+.+..+ .|++-+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~------~V~v~dr~~~~~~~l~~~g---~~g~~i~~~~s~~e~v~~l~~aDvVil 74 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF------VVCAFNRTVSKVDDFLANE---AKGTKVVGAQSLKEMVSKLKKPRRIIL 74 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC------CEEEECSSTHHHHHHHHTT---TTTSSCEECSSHHHHHHTBCSSCEEEE
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC------EEEEEeCCHHHHHHHHhcc---cCCCceeccCCHHHHHhhccCCCEEEE
Confidence 4689999999999999999999998 8999987653222222110 0000000011123333322 3454444
Q ss_pred EEEcccCCccccccc--cccccCCCEEEEcCCC-HHHHHHHHHHHHHcCCcEEEEeecCC
Q psy7300 541 YHENRVGPETEKVYD--DLFFESLDGIANALDN-VEARIYMDRRCVYSRKPLLESGTLGT 597 (986)
Q Consensus 541 ~~~~~v~~~~~~~~~--~~f~~~~DvVi~a~Dn-~~ar~~l~~~c~~~~~pli~~g~~G~ 597 (986)
+.... ...+..+. ...+..-++||++.-. +..-..+.+.+...++.++++++.|.
T Consensus 75 ~Vp~~--~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg 132 (484)
T 4gwg_A 75 LVKAG--QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGG 132 (484)
T ss_dssp CSCSS--HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESH
T ss_pred ecCCh--HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCC
Confidence 43331 00111111 2345667899987554 33333445667778999999988763
No 457
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=86.69 E-value=1.9 Score=46.47 Aligned_cols=37 Identities=22% Similarity=0.448 Sum_probs=28.0
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+-..++|+|.|+ |+||+++++.|+..|. +++++|.+
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~------~V~~~~r~ 45 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNV------EVFGTSRN 45 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCC------EEEEEecC
Confidence 3446678899986 8899999999999987 88888754
No 458
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=86.68 E-value=1.1 Score=47.29 Aligned_cols=36 Identities=28% Similarity=0.282 Sum_probs=27.7
Q ss_pred HHHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEe
Q psy7300 457 QEKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTD 498 (986)
Q Consensus 457 q~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD 498 (986)
+..+.+++|+|.|+ ||||.++++.|+..|. ++.+++
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~------~v~i~~ 57 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGF------NIGVHY 57 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEe
Confidence 34567888999986 8999999999999998 676654
No 459
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.67 E-value=0.4 Score=52.94 Aligned_cols=32 Identities=34% Similarity=0.405 Sum_probs=29.2
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
..||+|||+|++|+.++..|+..|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~------~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE------AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC------CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 4789999999999999999999987 8899875
No 460
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.66 E-value=1.7 Score=47.67 Aligned_cols=89 Identities=19% Similarity=0.161 Sum_probs=56.8
Q ss_pred CcEEEEcCChhHHH-HHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 76 SDVLISGLGGLGVE-IAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 76 s~VlIiG~gglGse-iaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
++|.++|.||.|.. +|+.|...|. .+++.|...-. + ..+.|++. .+.+.. ..-
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~~~-----------------~----~~~~L~~~--gi~v~~--g~~ 58 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKMYP-----------------P----MSTQLEAL--GIDVYE--GFD 58 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSCCT-----------------T----HHHHHHHT--TCEEEE--SCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCCCc-----------------H----HHHHHHhC--CCEEEC--CCC
Confidence 58999999999996 8999999997 68998864310 0 12446555 455543 211
Q ss_pred CHhhh-ccccEEEEecCCHHHHHHHHHHHHHcCCcEEE
Q psy7300 155 SEAFI-KKFRVVVLTNSTYDEQLAISQITHANDIALII 191 (986)
Q Consensus 155 ~~~~l-~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~ 191 (986)
.+++. .++|+||.+..=... .-.-..+++.|+|++.
T Consensus 59 ~~~l~~~~~d~vV~Spgi~~~-~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 59 AAQLDEFKADVYVIGNVAKRG-MDVVEAILNLGLPYIS 95 (326)
T ss_dssp GGGGGSCCCSEEEECTTCCTT-CHHHHHHHHTTCCEEE
T ss_pred HHHcCCCCCCEEEECCCcCCC-CHHHHHHHHcCCcEEe
Confidence 22333 479999987531111 1123457888999886
No 461
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.65 E-value=1.7 Score=45.62 Aligned_cols=62 Identities=19% Similarity=0.253 Sum_probs=43.8
Q ss_pred HhhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCC-CEEEe
Q psy7300 72 RMASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPY-VSTKA 149 (986)
Q Consensus 72 kL~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~-V~v~~ 149 (986)
.+.+++|+|.| .||+|.++|+.|+..|. ++.++|.+ ..+++.+.+.+.+.++. .++..
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 63 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKHVQEPIV 63 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTTSCCCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccccCcceE
Confidence 46678899999 58999999999999998 68888753 23556666777776554 34444
Q ss_pred ecCC
Q psy7300 150 YTGE 153 (986)
Q Consensus 150 ~~~~ 153 (986)
+..+
T Consensus 64 ~~~D 67 (250)
T 3nyw_A 64 LPLD 67 (250)
T ss_dssp EECC
T ss_pred Eecc
Confidence 3333
No 462
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=86.65 E-value=2.2 Score=46.74 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=26.7
Q ss_pred cEEEEec-ChhhHHHHHHHHHc-CCCcCCCCeEEEEeCC
Q psy7300 464 KYFVVGA-GAIGCELLKNFAMM-GVGAGPGGQIFVTDMD 500 (986)
Q Consensus 464 ~VlvvGa-GgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D 500 (986)
||+|.|+ |+||.++++.|+.. |. +++++|..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~------~V~~~~r~ 34 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQD------TVVNIDKL 34 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSC------EEEEEECC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCC------eEEEEecC
Confidence 6999996 99999999999987 56 88888754
No 463
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=86.65 E-value=1 Score=48.21 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=29.8
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 56 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGY------RVVIHYHN 56 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------eEEEEeCC
Confidence 477888999986 8999999999999998 88888754
No 464
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=86.65 E-value=1.2 Score=47.57 Aligned_cols=102 Identities=17% Similarity=0.239 Sum_probs=61.9
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCc-hHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 75 SSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGR-NRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 75 ~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk-~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
..+|+|.|+ |++|+.+++.|+..|. ++++++.+.-+. . .. .|++.+ +.+.. +.++ ....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-----------~--~~~~~~~~~-~~l~~--~~v~--~v~~ 62 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITA-----------A--NPETKEELI-DNYQS--LGVI--LLEG 62 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCS-----------S--CHHHHHHHH-HHHHH--TTCE--EEEC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCccc-----------C--ChHHHHHHH-HHHHh--CCCE--EEEe
Confidence 357999996 9999999999999994 677777542100 0 00 233322 22322 3343 3334
Q ss_pred CCC-H----hhhccccEEEEecCC--HHHHHHHHHHHHHcC-CcEEEeecc
Q psy7300 153 ELS-E----AFIKKFRVVVLTNST--YDEQLAISQITHAND-IALIIADTR 195 (986)
Q Consensus 153 ~~~-~----~~l~~~dvVI~~~~~--~~~~~~i~~~c~~~~-ip~I~~~~~ 195 (986)
+++ . ..+++.|+||.+... ......+.+.|++.+ ++-+...++
T Consensus 63 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 113 (307)
T 2gas_A 63 DINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEF 113 (307)
T ss_dssp CTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCC
T ss_pred CCCCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEEeeccc
Confidence 442 2 356789999987643 344566778888887 765443333
No 465
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=86.64 E-value=0.65 Score=53.53 Aligned_cols=94 Identities=10% Similarity=0.076 Sum_probs=60.0
Q ss_pred hcCcEEEEecChh--hHHHHHHHHHcCCCcCCCCeEEEEeCCc--cccccCccccCcCCCCCCCcHHHHHHHHHHhhCCC
Q psy7300 461 GKLKYFVVGAGAI--GCELLKNFAMMGVGAGPGGQIFVTDMDL--IEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPN 536 (986)
Q Consensus 461 ~~~~VlvvGaGgi--G~e~lknLa~~Gv~~g~~g~i~ivD~D~--Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~ 536 (986)
++.||.|||+|.+ |..++..|+..-. ..|.|+++|.|. ++..+.. ++.+.+ ..
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~---~~geV~L~Di~~e~le~~~~~------------------~~~l~~--~~ 60 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDER---MSGTVALYDLDFEAAQKNEVI------------------GNHSGN--GR 60 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSS---CCEEEEEECSSHHHHHHHHHH------------------HTTSTT--SC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccc---cCCeEEEEeCCHHHHHHHHHH------------------HHHHhc--cC
Confidence 4569999999997 5899998886431 126999999764 2211111 111111 33
Q ss_pred ceEEEEEcccCCccccccccccccCCCEEEEcC--CCHHHHHHHHHHHHHcCC
Q psy7300 537 VNITYHENRVGPETEKVYDDLFFESLDGIANAL--DNVEARIYMDRRCVYSRK 587 (986)
Q Consensus 537 ~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~--Dn~~ar~~l~~~c~~~~~ 587 (986)
.+|++.... .+.++++|+||.++ ...++|..=-++.+++|+
T Consensus 61 ~~I~~TtD~----------~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 61 WRYEAVSTL----------KKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp EEEEEESSH----------HHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred CeEEEECCH----------HHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 455432111 35679999999998 678888766677777776
No 466
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=86.63 E-value=1 Score=47.87 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=30.0
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDM 499 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~ 499 (986)
.|.+++|+|.|+ ||||.++++.|+..|. ++.++|.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~------~V~~~~~ 60 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGA------KVAVNYA 60 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 467888999886 8999999999999998 8888764
No 467
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=86.62 E-value=3.3 Score=44.69 Aligned_cols=113 Identities=13% Similarity=0.170 Sum_probs=67.2
Q ss_pred hcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 74 ASSDVLISGL-GGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 74 ~~s~VlIiG~-gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
++.||+|+|+ |..|..++++|...|..-+..+|+......- .|.+--..+.+.+.+..+++-+.....
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~-----------~G~~vy~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTH-----------LGLPVFNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE-----------TTEEEESSHHHHHHHHCCCEEEECCCG
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccee-----------CCeeccCCHHHHhhcCCCCEEEEecCH
Confidence 3578999998 9999999999999998745567765321111 121100011222333345655555443
Q ss_pred CCCHhh----h-ccccEEEEecC--CHHHHHHHHHHHHHcCCcEEEeecccc
Q psy7300 153 ELSEAF----I-KKFRVVVLTNS--TYDEQLAISQITHANDIALIIADTRGL 197 (986)
Q Consensus 153 ~~~~~~----l-~~~dvVI~~~~--~~~~~~~i~~~c~~~~ip~I~~~~~G~ 197 (986)
....+. + .+..++|..+. +.+...++.+.|+++++.++-..+.|+
T Consensus 75 ~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc~Gi 126 (288)
T 2nu8_A 75 PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNTPGV 126 (288)
T ss_dssp GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCcce
Confidence 332222 2 35676554333 555566899999999998876666653
No 468
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=86.61 E-value=2.9 Score=48.83 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=28.8
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.++|+|.|+ |.||+.+++.|+..|. ++++++.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~------~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH------EVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 368999995 8999999999999987 88888854
No 469
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.56 E-value=0.72 Score=50.32 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=32.0
Q ss_pred HhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 72 RMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 72 kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
..+-.+|.|||+|.+|..+|++|+..|. .++++|.+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 3344689999999999999999999997 799998754
No 470
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.53 E-value=1.9 Score=46.84 Aligned_cols=118 Identities=10% Similarity=0.080 Sum_probs=63.6
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
..||.+||+|-.|..+++||+..|. +++++|.+.=....|. +.|-.-+...++.+. ..++-+..
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~------~V~v~dr~~~~~~~l~--------~~G~~~~~s~~e~~~--~~dvvi~~ 68 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY------ELVVWNRTASKAEPLT--------KLGATVVENAIDAIT--PGGIVFSV 68 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC------EEEEC-------CTTT--------TTTCEECSSGGGGCC--TTCEEEEC
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC------eEEEEeCCHHHHHHHH--------HcCCeEeCCHHHHHh--cCCceeee
Confidence 4689999999999999999999998 8999885542222221 112111111111111 11222222
Q ss_pred EEcccCCccccccc---cccccCCCEEEEc-CCCHHHHHHHHHHHHHcCCcEEEEeecCC
Q psy7300 542 HENRVGPETEKVYD---DLFFESLDGIANA-LDNVEARIYMDRRCVYSRKPLLESGTLGT 597 (986)
Q Consensus 542 ~~~~v~~~~~~~~~---~~f~~~~DvVi~a-~Dn~~ar~~l~~~c~~~~~pli~~g~~G~ 597 (986)
....- ..+..+. ......-++||++ +-+++.-+.+.+.+...++-++++.+.|.
T Consensus 69 l~~~~--~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg 126 (297)
T 4gbj_A 69 LADDA--AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFAR 126 (297)
T ss_dssp CSSHH--HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECC
T ss_pred ccchh--hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCC
Confidence 11110 0011111 1223455677765 33566677788888889999999988875
No 471
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=86.51 E-value=0.54 Score=50.13 Aligned_cols=36 Identities=31% Similarity=0.356 Sum_probs=28.6
Q ss_pred HhhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 72 RMASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 72 kL~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d 108 (986)
+-..++|||.| .|.+|+++++.|...| .++++++..
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc
Confidence 34567899999 5889999999999999 478888864
No 472
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=86.49 E-value=1.3 Score=46.22 Aligned_cols=36 Identities=17% Similarity=0.415 Sum_probs=31.0
Q ss_pred HHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~------~V~~~~r~ 47 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS------KVIISGSN 47 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcCC
Confidence 457788999996 8999999999999997 89998753
No 473
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.47 E-value=0.68 Score=51.01 Aligned_cols=91 Identities=14% Similarity=0.104 Sum_probs=0.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcC-----CCCEEEeec
Q psy7300 77 DVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLN-----PYVSTKAYT 151 (986)
Q Consensus 77 ~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lN-----p~V~v~~~~ 151 (986)
+|.|||+|.+|+.++.+|+.+|. .++++| |...-.+.|++.. |........
T Consensus 16 kI~iIG~G~mG~ala~~L~~~G~-~V~~~~-----------------------r~~~~~~~l~~~g~~~~~~~~~~~~~~ 71 (335)
T 1z82_A 16 RFFVLGAGSWGTVFAQMLHENGE-EVILWA-----------------------RRKEIVDLINVSHTSPYVEESKITVRA 71 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHHHSCBTTBTTCCCCSEE
T ss_pred cEEEECcCHHHHHHHHHHHhCCC-eEEEEe-----------------------CCHHHHHHHHHhCCcccCCCCeeeEEE
Q ss_pred CCCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEee
Q psy7300 152 GELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIAD 193 (986)
Q Consensus 152 ~~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~ 193 (986)
..-..+ +..+|+||.|.-+......+..+.. .+..+|+..
T Consensus 72 ~~~~~~-~~~aDvVil~vk~~~~~~v~~~l~~-~~~~vv~~~ 111 (335)
T 1z82_A 72 TNDLEE-IKKEDILVIAIPVQYIREHLLRLPV-KPSMVLNLS 111 (335)
T ss_dssp ESCGGG-CCTTEEEEECSCGGGHHHHHTTCSS-CCSEEEECC
T ss_pred eCCHHH-hcCCCEEEEECCHHHHHHHHHHhCc-CCCEEEEEe
No 474
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=86.46 E-value=0.53 Score=54.78 Aligned_cols=77 Identities=19% Similarity=0.311 Sum_probs=49.1
Q ss_pred HHHhcCcEEEEecChhhHHHHHHHHH----cCCCcC-CCCeEEEEeCCcccc---ccCcc--ccCcCCC-CCCCcHHHHH
Q psy7300 458 EKLGKLKYFVVGAGAIGCELLKNFAM----MGVGAG-PGGQIFVTDMDLIEK---SNLNR--QFLFRPH-DVQQPKSATA 526 (986)
Q Consensus 458 ~~L~~~~VlvvGaGgiG~e~lknLa~----~Gv~~g-~~g~i~ivD~D~Ie~---sNLnR--qflf~~~-diG~~Ka~~a 526 (986)
++|.+.||++.|||+.|+.+++.|+. .|+.-. ..++|.++|..-+-. .+|+. +.+-+.. +.+ .+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~~~-----~L 352 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMK-----NL 352 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCCCC-----CH
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCCCC-----CH
Confidence 57899999999999999999999998 675100 026999999764422 23443 1222221 122 26
Q ss_pred HHHHHhhCCCceE
Q psy7300 527 AKAIKVMNPNVNI 539 (986)
Q Consensus 527 ~~~l~~~np~~~i 539 (986)
.+.++...|++=|
T Consensus 353 ~eav~~vkp~vlI 365 (555)
T 1gq2_A 353 EDIVKDIKPTVLI 365 (555)
T ss_dssp HHHHHHHCCSEEE
T ss_pred HHHHhhcCCCEEE
Confidence 6666666666544
No 475
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=86.45 E-value=1.4 Score=48.38 Aligned_cols=35 Identities=14% Similarity=0.157 Sum_probs=28.8
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEe
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTD 498 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD 498 (986)
..|.+++|+|.|+ ||||.++++.|+..|. +++++|
T Consensus 42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~------~Vv~~~ 77 (328)
T 2qhx_A 42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGY------AVCLHY 77 (328)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEc
Confidence 3477888999985 8999999999999998 888887
No 476
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.41 E-value=1.6 Score=51.02 Aligned_cols=125 Identities=11% Similarity=0.073 Sum_probs=64.5
Q ss_pred hcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhh-CCCceE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVM-NPNVNI 539 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~-np~~~i 539 (986)
...+|.|||+|.+|+.++.+|+..|. +++++|.+.=....+.... .. +-|-.-+....+.+..+ .+++-|
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~------~V~v~dr~~~~~~~l~~~~-~~--~~gi~~~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF------TVCAYNRTQSKVDHFLANE-AK--GKSIIGATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC------CEEEECSSSHHHHHHHHTT-TT--TSSEECCSSHHHHHHTSCSSCEEE
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC------EEEEEeCCHHHHHHHHccc-cc--CCCeEEeCCHHHHHhcCCCCCEEE
Confidence 35689999999999999999999998 8999986642222222100 00 00100011122333321 245444
Q ss_pred EEEEcccCCccccccc--cccccCCCEEEEcCCC-HHHHHHHHHHHHHcCCcEEEEeecC
Q psy7300 540 TYHENRVGPETEKVYD--DLFFESLDGIANALDN-VEARIYMDRRCVYSRKPLLESGTLG 596 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~--~~f~~~~DvVi~a~Dn-~~ar~~l~~~c~~~~~pli~~g~~G 596 (986)
.+....- ....... ...+..-++||++.-. +..-..+.+.+...++.++++++.|
T Consensus 80 l~Vp~~~--~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsg 137 (497)
T 2p4q_A 80 LLVKAGA--PVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSG 137 (497)
T ss_dssp ECCCSSH--HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred EEcCChH--HHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCccc
Confidence 4443310 0111110 1334555788876433 2222234445555677777777664
No 477
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=86.41 E-value=1.3 Score=47.74 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=26.1
Q ss_pred cEEEEec-ChhhHHHHHHHHHc--CCCcCCCCeEEEEeCC
Q psy7300 464 KYFVVGA-GAIGCELLKNFAMM--GVGAGPGGQIFVTDMD 500 (986)
Q Consensus 464 ~VlvvGa-GgiG~e~lknLa~~--Gv~~g~~g~i~ivD~D 500 (986)
+|+|.|+ |.||+++++.|+.. |. +++++|..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~------~V~~~~r~ 34 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKK------NVIASDIV 34 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGG------GEEEEESS
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCC------EEEEecCC
Confidence 5899996 89999999999988 55 78888753
No 478
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=86.38 E-value=1.9 Score=47.58 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=30.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q psy7300 76 SDVLISGLGGLGVEIAKNVILSGVKSVTLHDTT 108 (986)
Q Consensus 76 s~VlIiG~gglGseiaknLvl~GVg~itlvD~d 108 (986)
.+|.|+|+|.+|+.+|..|+..|...++|+|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999964
No 479
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=86.26 E-value=3.1 Score=48.08 Aligned_cols=121 Identities=12% Similarity=0.103 Sum_probs=65.0
Q ss_pred hhcCcEEEEc-CChhHHHHHHHHHHhC--CCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEe
Q psy7300 73 MASSDVLISG-LGGLGVEIAKNVILSG--VKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKA 149 (986)
Q Consensus 73 L~~s~VlIiG-~gglGseiaknLvl~G--Vg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~ 149 (986)
....+|+|.| .|++|+++++.|+..+ -.++++++...-...-+.+ +...-.-|... ..+.+.+.. .-.++.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~--l~~~~~~~~~~---~~~~~~~~~-~~~v~~ 144 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRR--LEKTFDSGDPE---LLRHFKELA-ADRLEV 144 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHH--HHGGGCSSCHH---HHHHHHHHH-TTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHH--HHHHHHhcchh---hhhhhhhhc-cCceEE
Confidence 3567999999 5889999999999983 1478888754211100000 00000000000 001111111 124445
Q ss_pred ecCCCC-------H----hhhccccEEEEecCC-------------HHHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 150 YTGELS-------E----AFIKKFRVVVLTNST-------------YDEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 150 ~~~~~~-------~----~~l~~~dvVI~~~~~-------------~~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
+..++. . +.+++.|+||.+... ......+.+.|++.++ +||+.++.+.+|
T Consensus 145 v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~ 219 (478)
T 4dqv_A 145 VAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGA 219 (478)
T ss_dssp EECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGT
T ss_pred EEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcC
Confidence 554542 1 245688999976431 2233466778888776 688888776544
No 480
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=86.20 E-value=2.8 Score=45.49 Aligned_cols=102 Identities=19% Similarity=0.264 Sum_probs=61.3
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCCC
Q psy7300 76 SDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGEL 154 (986)
Q Consensus 76 s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~~ 154 (986)
.+|||.| .|++|+.+++.|+..|. +++++|...-. ......+.+... + .++.+..++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~~~~~~l~~~-~--~~~~~~~Dl 59 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRK------------------GATDNLHWLSSL-G--NFEFVHGDI 59 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCST------------------THHHHHHHHHTT-C--CCEEEECCT
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCcc------------------CchhhhhhhccC-C--ceEEEEcCC
Confidence 3799999 68999999999999995 78888753210 001112233321 2 233344444
Q ss_pred C-H----hhhcc--ccEEEEecCC--H-------H--------HHHHHHHHHHHcCCc--EEEeecccceE
Q psy7300 155 S-E----AFIKK--FRVVVLTNST--Y-------D--------EQLAISQITHANDIA--LIIADTRGLFA 199 (986)
Q Consensus 155 ~-~----~~l~~--~dvVI~~~~~--~-------~--------~~~~i~~~c~~~~ip--~I~~~~~G~~G 199 (986)
. . +.+++ +|+||.+... . . ....+.+.|++.+++ ||++++.+.+|
T Consensus 60 ~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred CCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 2 2 34555 8999977532 1 1 113455778877764 88888777654
No 481
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.20 E-value=0.56 Score=50.82 Aligned_cols=36 Identities=22% Similarity=0.453 Sum_probs=32.0
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|+|+|++|..+++.|...|+ +++++|..
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~------~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA------KVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC------EEEEEECC
Confidence 3678899999999999999999999887 89998854
No 482
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=86.19 E-value=2.1 Score=46.87 Aligned_cols=74 Identities=22% Similarity=0.320 Sum_probs=50.5
Q ss_pred cEEEEc-CChhHHHHHHHHHHh-CC-CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 77 DVLISG-LGGLGVEIAKNVILS-GV-KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 77 ~VlIiG-~gglGseiaknLvl~-GV-g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
||.|+| +|.+|..++..|... +. .+++|+|-+. +++..+.-|+.....+++..+...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~--------------------~~~G~a~Dl~~~~~~~~v~~~~~~ 61 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP--------------------VTPGVAVDLSHIPTAVKIKGFSGE 61 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST--------------------THHHHHHHHHTSCSSEEEEEECSS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC--------------------CchhHHHHhhCCCCCceEEEecCC
Confidence 799999 899999999999876 54 6899999642 111122334554445566654322
Q ss_pred CCHhhhccccEEEEecC
Q psy7300 154 LSEAFIKKFRVVVLTNS 170 (986)
Q Consensus 154 ~~~~~l~~~dvVI~~~~ 170 (986)
-+.+-++++|+||.+..
T Consensus 62 ~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 62 DATPALEGADVVLISAG 78 (312)
T ss_dssp CCHHHHTTCSEEEECCS
T ss_pred CcHHHhCCCCEEEEeCC
Confidence 24567889999999863
No 483
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=86.19 E-value=3 Score=48.42 Aligned_cols=94 Identities=14% Similarity=0.143 Sum_probs=56.2
Q ss_pred cCcEEEEecChh--hHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHH----HHhhC
Q psy7300 462 KLKYFVVGAGAI--GCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKA----IKVMN 534 (986)
Q Consensus 462 ~~~VlvvGaGgi--G~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~----l~~~n 534 (986)
..||.|||+|++ |+.++..|++. ++. ...|+++|-|. .|++.+.+. +....
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~---~~eV~L~Di~~-------------------e~l~~~~~~~~~~l~~~~ 60 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLS---GSTVTLMDIDE-------------------ERLDAILTIAKKYVEEVG 60 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGT---TCEEEEECSCH-------------------HHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCC---CCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCC
Confidence 468999999996 67778888753 320 14899998654 222222222 22333
Q ss_pred CCceEEEEEcccCCccccccccccccCCCEEEEcCCCHH--HHHHHHHHHHHcCC
Q psy7300 535 PNVNITYHENRVGPETEKVYDDLFFESLDGIANALDNVE--ARIYMDRRCVYSRK 587 (986)
Q Consensus 535 p~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~--ar~~l~~~c~~~~~ 587 (986)
...+|.+... . .+-++++|+||.++-... .|....+...+++.
T Consensus 61 ~~~~I~~ttD-~---------~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~ 105 (480)
T 1obb_A 61 ADLKFEKTMN-L---------DDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGY 105 (480)
T ss_dssp CCCEEEEESC-H---------HHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEECC-H---------HHHhCCCCEEEECCCccccccccccccccccccc
Confidence 4455655311 0 134689999999987643 34345556666654
No 484
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=86.16 E-value=1.5 Score=48.22 Aligned_cols=73 Identities=8% Similarity=0.084 Sum_probs=50.1
Q ss_pred hcCcEEEEecChhhHHHHHHHHHc-CCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceE
Q psy7300 461 GKLKYFVVGAGAIGCELLKNFAMM-GVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNI 539 (986)
Q Consensus 461 ~~~~VlvvGaGgiG~e~lknLa~~-Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i 539 (986)
..++|+|||+|++|..+++.|... ++ .++.++|.+. .|++.+++.+.... +.+
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~-----~~V~v~~r~~-------------------~~a~~la~~~~~~~--~~~ 177 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDI-----GEVKAYDVRE-------------------KAAKKFVSYCEDRG--ISA 177 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCC-----CEEEEECSSH-------------------HHHHHHHHHHHHTT--CCE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCc-----cEEEEECCCH-------------------HHHHHHHHHHHhcC--ceE
Confidence 467899999999999999999874 56 5888886432 46666666655421 233
Q ss_pred EEEEcccCCccccccccccccCCCEEEEcCCC
Q psy7300 540 TYHENRVGPETEKVYDDLFFESLDGIANALDN 571 (986)
Q Consensus 540 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn 571 (986)
. .. .+ .+.. ++|+|++|+-+
T Consensus 178 ~-~~-~~---------~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 178 S-VQ-PA---------EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp E-EC-CH---------HHHT-SSSEEEECCCC
T ss_pred E-EC-CH---------HHHh-CCCEEEEeeCC
Confidence 2 11 11 2445 89999999865
No 485
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.14 E-value=1.8 Score=50.16 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=51.3
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecCC
Q psy7300 74 ASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTGE 153 (986)
Q Consensus 74 ~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~~ 153 (986)
...+|.|||+|.+|..+|.+|+..|. .++++|.+. .+++.+.+... .+. +.... +
T Consensus 4 ~~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~~-------------------~~~~~l~~~~~--~~g--i~~~~-s 58 (474)
T 2iz1_A 4 AQANFGVVGMAVMGKNLALNVESRGY-TVAIYNRTT-------------------SKTEEVFKEHQ--DKN--LVFTK-T 58 (474)
T ss_dssp TTBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH-------------------HHHHHHHHHTT--TSC--EEECS-S
T ss_pred CCCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCCH-------------------HHHHHHHHhCc--CCC--eEEeC-C
Confidence 34689999999999999999999997 588887422 23443333221 112 22211 1
Q ss_pred CCHhhhcc---ccEEEEecCCH-HHHHHHHHH
Q psy7300 154 LSEAFIKK---FRVVVLTNSTY-DEQLAISQI 181 (986)
Q Consensus 154 ~~~~~l~~---~dvVI~~~~~~-~~~~~i~~~ 181 (986)
.++++.. .|+||.|..+. .....+.++
T Consensus 59 -~~e~v~~l~~aDvVilavp~~~~v~~vl~~l 89 (474)
T 2iz1_A 59 -LEEFVGSLEKPRRIMLMVQAGAATDATIKSL 89 (474)
T ss_dssp -HHHHHHTBCSSCEEEECCCTTHHHHHHHHHH
T ss_pred -HHHHHhhccCCCEEEEEccCchHHHHHHHHH
Confidence 2355554 89999998763 444444443
No 486
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=86.11 E-value=1.6 Score=48.80 Aligned_cols=94 Identities=18% Similarity=0.237 Sum_probs=58.5
Q ss_pred CcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 463 LKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 463 ~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
.||+|||+ |.+|.|+++.|...++ +..++.++.. .+..|+.-+ + ....+..
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~---p~~el~~~as---------------~~saG~~~~---------~-~~~~~~~ 54 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTL---PIDKIRYLAS---------------ARSAGKSLK---------F-KDQDITI 54 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCC---CEEEEEEEEC---------------TTTTTCEEE---------E-TTEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcCCC---CcEEEEEEEc---------------cccCCCcce---------e-cCCCceE
Confidence 58999996 7799999999998755 2234555432 233343221 0 0111111
Q ss_pred EEcccCCccccccccccccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEeec
Q psy7300 542 HENRVGPETEKVYDDLFFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGTL 595 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~~ 595 (986)
. .+ +.+.++++|+|+.|+....++.+.... ...|..+|+.+..
T Consensus 55 ~--~~--------~~~~~~~~Dvvf~a~~~~~s~~~a~~~-~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 55 E--ET--------TETAFEGVDIALFSAGSSTSAKYAPYA-VKAGVVVVDNTSY 97 (366)
T ss_dssp E--EC--------CTTTTTTCSEEEECSCHHHHHHHHHHH-HHTTCEEEECSST
T ss_pred e--eC--------CHHHhcCCCEEEECCChHhHHHHHHHH-HHCCCEEEEcCCc
Confidence 1 11 122358999999999988888777665 5678888887653
No 487
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=86.10 E-value=1.3 Score=46.78 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=29.2
Q ss_pred hcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 74 ASSDVLISG-LGGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 74 ~~s~VlIiG-~gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
..++|+|.| .|++|.++++.|+..|. ++++.|.+.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 346799999 68999999999999995 788888654
No 488
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=86.06 E-value=0.83 Score=51.50 Aligned_cols=102 Identities=14% Similarity=0.026 Sum_probs=61.0
Q ss_pred HhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCce
Q psy7300 460 LGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVN 538 (986)
Q Consensus 460 L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~ 538 (986)
+...||.|||+ |.+|.|+++.|...-. -+|..+- ...+..|+.=.++ .|...
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~-----~el~~l~--------------aS~~saGk~~~~~--------~~~~~ 69 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPE-----FEIHALG--------------ASSRSAGKKYKDA--------ASWKQ 69 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSS-----EEEEEEE--------------ECTTTTTSBHHHH--------CCCCC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCC-----ceEEEee--------------ccccccCCCHHHh--------ccccc
Confidence 45578999997 8899999998875432 2443221 2455677764433 22110
Q ss_pred EEEE-----EcccCCccccccccc-cccCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEee
Q psy7300 539 ITYH-----ENRVGPETEKVYDDL-FFESLDGIANALDNVEARIYMDRRCVYSRKPLLESGT 594 (986)
Q Consensus 539 i~~~-----~~~v~~~~~~~~~~~-f~~~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli~~g~ 594 (986)
-... +..+. ..++. .|+++|+|+.|+....++.+.... ...|..+|+.+.
T Consensus 70 ~~~~p~~~~~~~v~-----~~~~~~~~~~~Dvvf~alp~~~s~~~~~~~-~~~G~~VIDlSa 125 (381)
T 3hsk_A 70 TETLPETEQDIVVQ-----ECKPEGNFLECDVVFSGLDADVAGDIEKSF-VEAGLAVVSNAK 125 (381)
T ss_dssp SSCCCHHHHTCBCE-----ESSSCTTGGGCSEEEECCCHHHHHHHHHHH-HHTTCEEEECCS
T ss_pred ccccccccccceEE-----eCchhhhcccCCEEEECCChhHHHHHHHHH-HhCCCEEEEcCC
Confidence 0000 00010 01122 468999999999999888877665 567888887764
No 489
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=86.04 E-value=1.8 Score=47.72 Aligned_cols=84 Identities=21% Similarity=0.270 Sum_probs=0.0
Q ss_pred cEEEEecChhhHHHHHHHHHc-CCCcCCCCeEE-EEeCCccccccCccccCcCCCCCCCcHHHHHHHHHHhhCCCceEEE
Q psy7300 464 KYFVVGAGAIGCELLKNFAMM-GVGAGPGGQIF-VTDMDLIEKSNLNRQFLFRPHDVQQPKSATAAKAIKVMNPNVNITY 541 (986)
Q Consensus 464 ~VlvvGaGgiG~e~lknLa~~-Gv~~g~~g~i~-ivD~D~Ie~sNLnRqflf~~~diG~~Ka~~a~~~l~~~np~~~i~~ 541 (986)
||.|||+|.+|..+++.|... |+ .++ ++|.+. +.+.+...+.. +..
T Consensus 6 rvgiiG~G~~g~~~~~~l~~~~~~------~l~av~d~~~----------------------~~~~~~a~~~g----~~~ 53 (344)
T 3euw_A 6 RIALFGAGRIGHVHAANIAANPDL------ELVVIADPFI----------------------EGAQRLAEANG----AEA 53 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTE------EEEEEECSSH----------------------HHHHHHHHTTT----CEE
T ss_pred EEEEECCcHHHHHHHHHHHhCCCc------EEEEEECCCH----------------------HHHHHHHHHcC----Cce
Q ss_pred EEcccCCcccccccccccc--CCCEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy7300 542 HENRVGPETEKVYDDLFFE--SLDGIANALDNVEARIYMDRRCVYSRKPLL 590 (986)
Q Consensus 542 ~~~~v~~~~~~~~~~~f~~--~~DvVi~a~Dn~~ar~~l~~~c~~~~~pli 590 (986)
+... ++.+. ..|+|+.|+ .......+-..|.+.|++++
T Consensus 54 ~~~~----------~~~l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~ 93 (344)
T 3euw_A 54 VASP----------DEVFARDDIDGIVIGS-PTSTHVDLITRAVERGIPAL 93 (344)
T ss_dssp ESSH----------HHHTTCSCCCEEEECS-CGGGHHHHHHHHHHTTCCEE
T ss_pred eCCH----------HHHhcCCCCCEEEEeC-CchhhHHHHHHHHHcCCcEE
No 490
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=86.01 E-value=1 Score=48.30 Aligned_cols=33 Identities=27% Similarity=0.570 Sum_probs=28.2
Q ss_pred cCcEEEEec-ChhhHHHHHHHHHc--CCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGA-GAIGCELLKNFAMM--GVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGa-GgiG~e~lknLa~~--Gv~~g~~g~i~ivD~D 500 (986)
+++|+|.|+ |.||+++++.|+.. |. +++++|.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~------~V~~~~r~ 37 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTE------NVIASDIR 37 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGG------GEEEEESC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCC------EEEEEcCC
Confidence 468999998 99999999999988 65 88888754
No 491
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.00 E-value=0.51 Score=51.54 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=28.9
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
.||+|+|+|++|+.++..|+..|. .++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE------DVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC------CEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC------eEEEEEcCc
Confidence 589999999999999999999987 899987653
No 492
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.97 E-value=0.97 Score=50.69 Aligned_cols=74 Identities=20% Similarity=0.151 Sum_probs=0.0
Q ss_pred hhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 73 MASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 73 L~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
+...+|+|+|+|++|..+++.+...|. +++++|. ..+.+......+...+.+.....
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~----------------------~~~~~~~~~~~~g~~~~~~~~~~ 220 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV----------------------NHKRLQYLDDVFGGRVITLTATE 220 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES----------------------CHHHHHHHHHHTTTSEEEEECCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC----------------------CHHHHHHHHHhcCceEEEecCCH
Q ss_pred CCCHhhhccccEEEEec
Q psy7300 153 ELSEAFIKKFRVVVLTN 169 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~ 169 (986)
.--.+.+.++|+||.|.
T Consensus 221 ~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 221 ANIKKSVQHADLLIGAV 237 (369)
T ss_dssp HHHHHHHHHCSEEEECC
T ss_pred HHHHHHHhCCCEEEECC
No 493
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=85.93 E-value=1.8 Score=44.73 Aligned_cols=88 Identities=22% Similarity=0.262 Sum_probs=53.0
Q ss_pred cCcEEEEcCChhHHHHHHH--HHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEeecC
Q psy7300 75 SSDVLISGLGGLGVEIAKN--VILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAYTG 152 (986)
Q Consensus 75 ~s~VlIiG~gglGseiakn--Lvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~~~ 152 (986)
..+|+|+|+|.+|..+++. ....|+.=+.++|.|.-. +|+. + ..+.|... .
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k--------------~g~~--------i----~gv~V~~~-~ 137 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESK--------------IGTE--------V----GGVPVYNL-D 137 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTT--------------TTCE--------E----TTEEEEEG-G
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHH--------------HHhH--------h----cCCeeech-h
Confidence 4689999999999999994 335677778888876521 1110 0 01333331 2
Q ss_pred CCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEE
Q psy7300 153 ELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALII 191 (986)
Q Consensus 153 ~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~ 191 (986)
+ -+++++..|+|+.|..+.. ...+.+.|.+.|++-|.
T Consensus 138 d-l~eli~~~D~ViIAvPs~~-~~ei~~~l~~aGi~~Il 174 (215)
T 2vt3_A 138 D-LEQHVKDESVAILTVPAVA-AQSITDRLVALGIKGIL 174 (215)
T ss_dssp G-HHHHCSSCCEEEECSCHHH-HHHHHHHHHHTTCCEEE
T ss_pred h-HHHHHHhCCEEEEecCchh-HHHHHHHHHHcCCCEEE
Confidence 2 2355555599999986644 34677888888877553
No 494
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.92 E-value=0.56 Score=50.93 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=29.9
Q ss_pred CcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCCc
Q psy7300 463 LKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMDL 501 (986)
Q Consensus 463 ~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~ 501 (986)
++|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~------~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH------TVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCH
Confidence 479999999999999999999998 899998653
No 495
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=85.92 E-value=0.6 Score=51.26 Aligned_cols=126 Identities=14% Similarity=0.169 Sum_probs=0.0
Q ss_pred cchhcccHHHHHHhhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHh
Q psy7300 60 RQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLS 139 (986)
Q Consensus 60 Rqi~l~G~~~q~kL~~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~ 139 (986)
++.+.-......+....+|.|||+|.+|..+|++|+..|. .++++|.+.-....+... |-..+....+.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~--------g~~~~~~~~e~~~ 86 (320)
T 4dll_A 16 ENLYFQSMTVESDPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL--------GATIHEQARAAAR 86 (320)
T ss_dssp -------------CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCEEESSHHHHHT
T ss_pred cccceechhhccccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC--------CCEeeCCHHHHHh
Q ss_pred hcCCCCEEEeecC-----------CCCHhhhccccEEEEecCCHHHHHHHHHHHHHcCCcEEEeeccc
Q psy7300 140 QLNPYVSTKAYTG-----------ELSEAFIKKFRVVVLTNSTYDEQLAISQITHANDIALIIADTRG 196 (986)
Q Consensus 140 ~lNp~V~v~~~~~-----------~~~~~~l~~~dvVI~~~~~~~~~~~i~~~c~~~~ip~I~~~~~G 196 (986)
+ .++-+..... .+-+.+-.+.-+|-.++..+.....+.+.+.+.++.|+.+.+.|
T Consensus 87 ~--aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g 152 (320)
T 4dll_A 87 D--ADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSG 152 (320)
T ss_dssp T--CSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred c--CCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcC
No 496
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=85.92 E-value=1.5 Score=46.45 Aligned_cols=57 Identities=14% Similarity=0.256 Sum_probs=40.5
Q ss_pred HHHhcCcEEEEec-ChhhHHHHHHHHHcCCCcCCCCeEEEEeCCccccccCccccCcCCCCCCCcH
Q psy7300 458 EKLGKLKYFVVGA-GAIGCELLKNFAMMGVGAGPGGQIFVTDMDLIEKSNLNRQFLFRPHDVQQPK 522 (986)
Q Consensus 458 ~~L~~~~VlvvGa-GgiG~e~lknLa~~Gv~~g~~g~i~ivD~D~Ie~sNLnRqflf~~~diG~~K 522 (986)
-++.+++|+|.|+ ||||.++++.|+..|. ++.++|.+.-...+. +..+-..|+....
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~~~~~~~--~~~~~~~Dv~d~~ 81 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY------RVVATSRSIKPSADP--DIHTVAGDISKPE 81 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESSCCCCSST--TEEEEESCTTSHH
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCChhhcccC--ceEEEEccCCCHH
Confidence 4678889999986 8999999999999998 899998764332222 2223345665543
No 497
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.90 E-value=0.58 Score=50.86 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=32.2
Q ss_pred HHhcCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 459 KLGKLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 459 ~L~~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
.|.+++|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~------~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA------NVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3678899999999999999999999887 89998854
No 498
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=85.90 E-value=0.58 Score=50.71 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=30.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCC
Q psy7300 75 SSDVLISGLGGLGVEIAKNVILSGVKSVTLHDTTA 109 (986)
Q Consensus 75 ~s~VlIiG~gglGseiaknLvl~GVg~itlvD~d~ 109 (986)
..+|.|||+|.+|..+|++|...|. .++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999996 699998654
No 499
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.82 E-value=0.62 Score=50.85 Aligned_cols=35 Identities=34% Similarity=0.509 Sum_probs=30.7
Q ss_pred cCcEEEEecChhhHHHHHHHHHcCCCcCCCCeEEEEeCC
Q psy7300 462 KLKYFVVGAGAIGCELLKNFAMMGVGAGPGGQIFVTDMD 500 (986)
Q Consensus 462 ~~~VlvvGaGgiG~e~lknLa~~Gv~~g~~g~i~ivD~D 500 (986)
..||.|+|+|++|+.++..|+..|.. ++++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~----~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIA----REIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 46899999999999999999999863 589999865
No 500
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=85.79 E-value=4.8 Score=43.57 Aligned_cols=102 Identities=13% Similarity=0.247 Sum_probs=60.5
Q ss_pred cEEEEc-CChhHHHHHHHHHHh---CC--CeEEEEeCCCCCccCCCcccccCcCccCchHHHHHHHHHhhcCCCCEEEee
Q psy7300 77 DVLISG-LGGLGVEIAKNVILS---GV--KSVTLHDTTATSLSDLSSQFYLSEKDVGRNRAEVSHTNLSQLNPYVSTKAY 150 (986)
Q Consensus 77 ~VlIiG-~gglGseiaknLvl~---GV--g~itlvD~d~V~~sdl~rqf~~~~~diGk~Ka~a~~~~L~~lNp~V~v~~~ 150 (986)
+|||.| .|++|+.+++.|+.. |+ .+++++|...-.. +. +.+.++...-.++.+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~-~~--------------------~~~~~~~~~~~~~~~ 60 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG-NR--------------------ANLAPVDADPRLRFV 60 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC-CG--------------------GGGGGGTTCTTEEEE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccC-ch--------------------hhhhhcccCCCeEEE
Confidence 699999 699999999999996 63 5788887542110 00 011111111123334
Q ss_pred cCCCC-H----hhhccccEEEEecCCH-----------------HHHHHHHHHHHHcCC-cEEEeecccceE
Q psy7300 151 TGELS-E----AFIKKFRVVVLTNSTY-----------------DEQLAISQITHANDI-ALIIADTRGLFA 199 (986)
Q Consensus 151 ~~~~~-~----~~l~~~dvVI~~~~~~-----------------~~~~~i~~~c~~~~i-p~I~~~~~G~~G 199 (986)
..++. . +.+.++|+||.+.... .....+.+.|++.++ .||++++.+.+|
T Consensus 61 ~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg 132 (337)
T 1r6d_A 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYG 132 (337)
T ss_dssp ECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhC
Confidence 44442 2 3456789888765311 112355677888877 688888776665
Done!