Query psy7301
Match_columns 129
No_of_seqs 150 out of 585
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 23:20:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7301.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7301hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cmm_A Ubiquitin-activating en 100.0 7.7E-41 2.6E-45 308.9 12.6 128 1-128 822-983 (1015)
2 1y8q_B Anthracycline-, ubiquit 100.0 2.4E-36 8.1E-41 268.7 8.8 123 1-127 352-516 (640)
3 1tt5_B Ubiquitin-activating en 99.7 8E-17 2.7E-21 137.3 8.6 121 1-123 249-410 (434)
4 2nvu_B Maltose binding protein 99.6 6.5E-16 2.2E-20 137.7 8.4 122 1-124 620-782 (805)
5 1y8q_A Ubiquitin-like 1 activa 96.9 0.0008 2.7E-08 55.2 4.5 62 2-67 267-328 (346)
6 1z7l_A Ubiquitin-activating en 93.7 0.059 2E-06 43.4 4.1 33 2-34 148-182 (276)
7 3cmm_A Ubiquitin-activating en 80.2 1.1 3.8E-05 41.8 3.4 35 1-35 719-760 (1015)
8 3h8v_A Ubiquitin-like modifier 72.1 1.6 5.5E-05 35.0 1.9 26 34-59 215-240 (292)
9 1tt5_A APPBP1, amyloid protein 71.6 11 0.00036 32.5 7.0 32 36-69 487-518 (531)
10 3h5n_A MCCB protein; ubiquitin 67.4 3.6 0.00012 33.4 3.0 26 33-58 291-316 (353)
11 1jw9_B Molybdopterin biosynthe 66.2 5.1 0.00017 30.6 3.6 28 33-60 190-217 (249)
12 1y8x_B Ubiquitin-activating en 62.8 1.1 3.8E-05 30.9 -0.8 34 91-124 35-75 (98)
13 1zud_1 Adenylyltransferase THI 48.7 15 0.00052 28.0 3.5 27 34-60 188-214 (251)
14 3rui_A Ubiquitin-like modifier 31.5 34 0.0012 27.9 3.2 25 35-59 219-243 (340)
15 3d24_B Peroxisome proliferator 22.3 47 0.0016 17.7 1.6 13 47-59 9-21 (26)
16 4gsl_A Ubiquitin-like modifier 21.2 62 0.0021 28.8 3.1 25 35-59 511-535 (615)
No 1
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-41 Score=308.89 Aligned_cols=128 Identities=64% Similarity=0.976 Sum_probs=121.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCChhhHHHHhcccccchhhhhHHHHHHHHHHHHHHHcCCCChhhccccccccccccccccC
Q psy7301 1 MDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVCLELIKLAKGFTDIEKYKNGFVNLALPFFGFSE 80 (129)
Q Consensus 1 ~~fi~aasnlRA~~y~I~~~~~~~~k~iag~IIPAiaTTnA~Vagl~~~El~K~l~~~~~~e~~rn~f~nla~p~~~~se 80 (129)
||||+|||||||+||+||+.|++++|+||||||||||||||+||||+|+|+||+++|+++++.|||+|+|+++|+|.|+|
T Consensus 822 ~dFi~aasNlRa~ny~I~~~~~~~~k~iaG~IIPAIaTT~AivaGl~~lE~~K~~~~~~~~~~~kn~f~nla~~~~~~~~ 901 (1015)
T 3cmm_A 822 IEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSE 901 (1015)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHTTCCCGGGCCEEEEETTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCccCHHHHHHHhCCcCccchhHHHHHHHHHHHHHHHHHhcccchhhhhhHHHhccCCceeecC
Confidence 69999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCCCCC--------c--------------------------eeeEEEecceeeeeccCCchhHhhhcCCcHHHHHhhhc
Q psy7301 81 PIAAPKD--------R--------------------------AITMLSQGVCMLYSYFMPPAKREERLNLPLVEVVRRSA 126 (129)
Q Consensus 81 P~~~~~~--------~--------------------------ev~~l~~g~~~lY~~~~~~~~~~~rl~~~l~elv~~~~ 126 (129)
|+++++. + +++||++|++|||++|||+.+.++||+++|+||+++++
T Consensus 902 p~~~~~~~~~~~~~~t~wd~~~v~~~~Tl~~li~~~~~~~~~~~~~i~~~~~~ly~~~~~~~~~~~~l~~~l~~l~~~~~ 981 (1015)
T 3cmm_A 902 PIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYGVSLLYASFFPPKKLKERLNLPITQLVKLVT 981 (1015)
T ss_dssp CCBCCEEEETTEEEETTTCEEEEESCCBHHHHHHHHHHTTCCEEEEEEETTEEEEETTCCHHHHHHHTTSBHHHHHHHHS
T ss_pred CCCCCCCCCCCCCCCeEEEEEEECCCCcHHHHHHHHHHHhCCcceeeccCCcEEEecCCCchhhHHhccCCHHHHHHhhc
Confidence 9988631 0 89999999999999999878888999999999999998
Q ss_pred cC
Q psy7301 127 PI 128 (129)
Q Consensus 127 k~ 128 (129)
|+
T Consensus 982 ~~ 983 (1015)
T 3cmm_A 982 KK 983 (1015)
T ss_dssp SS
T ss_pred cC
Confidence 75
No 2
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=2.4e-36 Score=268.72 Aligned_cols=123 Identities=29% Similarity=0.364 Sum_probs=111.3
Q ss_pred ChHHHHHHHHHHHhcCCCCCChhhHHHHhcccccchhhhhHHHHHHHHHHHHHHHcCCCChhhccccccccccc----cc
Q psy7301 1 MDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVCLELIKLAKGFTDIEKYKNGFVNLALP----FF 76 (129)
Q Consensus 1 ~~fi~aasnlRA~~y~I~~~~~~~~k~iag~IIPAiaTTnA~Vagl~~~El~K~l~~~~~~e~~rn~f~nla~p----~~ 76 (129)
||||+|+|||||+||||++.|++++|+||||||||||||||+|||+||+|+||++++ +++.|||+|+|++.| ++
T Consensus 352 ~dFV~aaaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnAiVaGl~~lE~~Kvl~~--~~~~~kn~f~n~a~~~~~~~~ 429 (640)
T 1y8q_B 352 MDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSG--KIDQCRTIFLNKQPNPRKKLL 429 (640)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTT--CGGGCEEEEECSSCCTTSEEE
T ss_pred HHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHHHHHHHHHHHHHHHHhc--cHHhhhhhheeeccCCCCcEE
Confidence 699999999999999999999999999999999999999999999999999999997 489999999999999 89
Q ss_pred cccCCCCCCCCc----------------------------------eeeEEEe---cceeeeeccCCchhHhhhcCCcHH
Q psy7301 77 GFSEPIAAPKDR----------------------------------AITMLSQ---GVCMLYSYFMPPAKREERLNLPLV 119 (129)
Q Consensus 77 ~~seP~~~~~~~----------------------------------ev~~l~~---g~~~lY~~~~~~~~~~~rl~~~l~ 119 (129)
.+++|.+|.+++ +++||++ |+++||+++++. .++||+++|+
T Consensus 430 ~~~~p~~p~~~c~vc~~~~~~~~~~~~~~~TL~~li~~~~~~~~~l~~~~is~~~~~~~~ly~~~~~~--~~~~l~~~l~ 507 (640)
T 1y8q_B 430 VPCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTILISSEEGE--TEANNHKKLS 507 (640)
T ss_dssp EEEECCCCCTTCTTTSSSCEEEEEECTTTCBHHHHHHCCCCCCTCCSSCEEEESSSSCCEEECSSSSS--STTGGGSBGG
T ss_pred eecccCCCCCCCcccCCccEEEEEEeCCCCcHHHHHHHHHHHhhCCCCceEEEEcCCCcEEEeccchh--hHHhhhCcHH
Confidence 999998776541 7889999 999999999874 4589999999
Q ss_pred HH-Hhhhcc
Q psy7301 120 EV-VRRSAP 127 (129)
Q Consensus 120 el-v~~~~k 127 (129)
|| |++.++
T Consensus 508 el~v~~~~~ 516 (640)
T 1y8q_B 508 EFGIRNGSR 516 (640)
T ss_dssp GGTCCTTCE
T ss_pred HhCccCCcE
Confidence 96 666543
No 3
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=99.67 E-value=8e-17 Score=137.34 Aligned_cols=121 Identities=22% Similarity=0.294 Sum_probs=80.9
Q ss_pred ChHHHHHHHHHHHhcCCCCCChhhHHHHhcccccchhhhhHHHHHHHHHHHHHHHcCCCChhhcccc-ccccccccc--c
Q psy7301 1 MDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVCLELIKLAKGFTDIEKYKNG-FVNLALPFF--G 77 (129)
Q Consensus 1 ~~fi~aasnlRA~~y~I~~~~~~~~k~iag~IIPAiaTTnA~Vagl~~~El~K~l~~~~~~e~~rn~-f~nla~p~~--~ 77 (129)
++||++.+|+||+.|||+..+++.+++++|+|||||+||||+|+|+++.|++|++.|..+ ...|. ++|.....+ .
T Consensus 249 ~~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g~~~--~l~~~l~~d~~~~~~~~~ 326 (434)
T 1tt5_B 249 IQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYI--PLNNYLVFNDVDGLYTYT 326 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTCSC--CCCSEEEEECSBSCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhCCCc--ccCceEEEEcCCCceeEE
Confidence 369999999999999999999999999999999999999999999999999999998642 11221 111111111 1
Q ss_pred cc-CCCC-CC---C-----------C---------------ceeeEEEe----cceeeeeccCCc--hhHhhhcCCcHHH
Q psy7301 78 FS-EPIA-AP---K-----------D---------------RAITMLSQ----GVCMLYSYFMPP--AKREERLNLPLVE 120 (129)
Q Consensus 78 ~s-eP~~-~~---~-----------~---------------~ev~~l~~----g~~~lY~~~~~~--~~~~~rl~~~l~e 120 (129)
+. +|-+ |+ . + -+.+||++ |+++||++++|. .+.++||+++|+|
T Consensus 327 ~~~~~~~~C~vC~~~~~~~~~~~~~tl~~~~~~l~~~~~~~~~~~~is~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~ 406 (434)
T 1tt5_B 327 FEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKE 406 (434)
T ss_dssp ECCCCCTTCTTTCSSCBCCCC-----CTTHHHHHHHCSSCCCSSCCCEET----TEECCCCCCTTTTTTSCC-CCC----
T ss_pred EeccCCCCCCccCCCCceEEECCCccHHHHHHHHhccCccceEccEEEEEccCCCcEEEecCCcchhhhhHhhhcCCHHH
Confidence 11 1100 00 0 0 15678887 689999998762 2345789999999
Q ss_pred H-Hh
Q psy7301 121 V-VR 123 (129)
Q Consensus 121 l-v~ 123 (129)
| ++
T Consensus 407 l~~~ 410 (434)
T 1tt5_B 407 LGLV 410 (434)
T ss_dssp -CCC
T ss_pred cCCC
Confidence 8 54
No 4
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.62 E-value=6.5e-16 Score=137.68 Aligned_cols=122 Identities=20% Similarity=0.259 Sum_probs=89.0
Q ss_pred ChHHHHHHHHHHHhcCCCCCChhhHHHHhcccccchhhhhHHHHHHHHHHHHHHHcCCCChhhcccc-ccccccccc--c
Q psy7301 1 MDFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVCLELIKLAKGFTDIEKYKNG-FVNLALPFF--G 77 (129)
Q Consensus 1 ~~fi~aasnlRA~~y~I~~~~~~~~k~iag~IIPAiaTTnA~Vagl~~~El~K~l~~~~~~e~~rn~-f~nla~p~~--~ 77 (129)
++||++.+|+||+.|||+..+++.+++++|+|||||+||||+|+|++++|++|++.|..+ ..+|. +++.....+ .
T Consensus 620 ~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~--~l~~~~~~~~~~~~~~~~ 697 (805)
T 2nvu_B 620 IQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYI--PLNNYLVFNDVDGLYTYT 697 (805)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSC--CCCSEEEEECSBSCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccc--ccCceEEecCCCCccccc
Confidence 368999999999999999999999999999999999999999999999999999998642 12231 112111111 1
Q ss_pred cc---CCCC--CCC-----------C---------------ceeeEEEe----cceeeeeccCCchh--HhhhcCCcHHH
Q psy7301 78 FS---EPIA--APK-----------D---------------RAITMLSQ----GVCMLYSYFMPPAK--REERLNLPLVE 120 (129)
Q Consensus 78 ~s---eP~~--~~~-----------~---------------~ev~~l~~----g~~~lY~~~~~~~~--~~~rl~~~l~e 120 (129)
+. .|-. |.. + -+++||++ |+++||++++|..+ .++||+++|+|
T Consensus 698 ~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~ 777 (805)
T 2nvu_B 698 FEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKE 777 (805)
T ss_dssp ECCCCCTTCTTTSCCCEEEEECTTSBHHHHHHHHHHCTTTCCSSCEEEEEETTEEEEEECCSSHHHHHHHGGGGGSBTTT
T ss_pred ccCCCCCCCCeeCceeEEEEECCcChHHHHHHHHHhhhccCcccceEEEEccCCCcEEEecCccchhhhhHhhhcCCHHH
Confidence 11 1110 000 0 16788988 68999999976533 45799999999
Q ss_pred H-Hhh
Q psy7301 121 V-VRR 124 (129)
Q Consensus 121 l-v~~ 124 (129)
| +++
T Consensus 778 l~~~~ 782 (805)
T 2nvu_B 778 LGLVD 782 (805)
T ss_dssp TTCCT
T ss_pred cCCCC
Confidence 8 543
No 5
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.90 E-value=0.0008 Score=55.17 Aligned_cols=62 Identities=18% Similarity=0.200 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHhcCCCCCChhhHHHHhcccccchhhhhHHHHHHHHHHHHHHHcCCCChhhcccc
Q psy7301 2 DFIVAASNLRAANYGITPADRHTSKLIAGKIIPAIATTTSVVAGLVCLELIKLAKGFTDIEKYKNG 67 (129)
Q Consensus 2 ~fi~aasnlRA~~y~I~~~~~~~~k~iag~IIPAiaTTnA~Vagl~~~El~K~l~~~~~~e~~rn~ 67 (129)
+++.+.++-++..++++... ....+..++.+.+++|+|+|+|+++.|++|+++|. ....+|.
T Consensus 267 ~~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~l~pv~AiiGGi~aQEviK~it~k--~~Pl~n~ 328 (346)
T 1y8q_A 267 ELLLQIRNDVLDSLGISPDL--LPEDFVRYCFSEMAPVCAVVGGILAQEIVKALSQR--DPPHNNF 328 (346)
T ss_dssp HHHHHHHHHHHHTTTCCGGG--SCGGGGGSSCSBCHHHHHHHHHHHHHHHHHHHHTB--SCCCCSE
T ss_pred HHHHHHHHHHHHhcCCCccc--CCHHHHHHhcCCccHHHHHHHHHHHHHHHHHhcCC--CcccccE
Confidence 56778888889899876421 11234666789999999999999999999999985 3344553
No 6
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=93.67 E-value=0.059 Score=43.42 Aligned_cols=33 Identities=36% Similarity=0.665 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhcCCCC-CChhhHHHHhccc-cc
Q psy7301 2 DFIVAASNLRAANYGITP-ADRHTSKLIAGKI-IP 34 (129)
Q Consensus 2 ~fi~aasnlRA~~y~I~~-~~~~~~k~iag~I-IP 34 (129)
+||.++|||||.+|||++ .|+..+..++.++ +|
T Consensus 148 ~fI~aaa~L~A~~~gi~~~~d~~~i~~~~~~~~vp 182 (276)
T 1z7l_A 148 DYVMAAANLFAQTYGLTGSQDRAAVASLLQSVQVP 182 (276)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHhcCCCC
Confidence 799999999999999986 5666777666555 44
No 7
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=80.25 E-value=1.1 Score=41.83 Aligned_cols=35 Identities=37% Similarity=0.653 Sum_probs=27.4
Q ss_pred ChHHHHHHHHHHHhcCCCCC------ChhhHHHHhccc-ccc
Q psy7301 1 MDFIVAASNLRAANYGITPA------DRHTSKLIAGKI-IPA 35 (129)
Q Consensus 1 ~~fi~aasnlRA~~y~I~~~------~~~~~k~iag~I-IPA 35 (129)
++||.+++||||.+|||++. |+...+.++.++ +|.
T Consensus 719 ~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 760 (1015)
T 3cmm_A 719 FHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPE 760 (1015)
T ss_dssp HHHHHHHHHHHHHHHTCCCSSTTSSCCHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHhHHHhcCCCCccccccCCHHHHHHHHhhCcCCC
Confidence 37999999999999999963 566777777665 444
No 8
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=72.11 E-value=1.6 Score=35.00 Aligned_cols=26 Identities=31% Similarity=0.537 Sum_probs=23.2
Q ss_pred cchhhhhHHHHHHHHHHHHHHHcCCC
Q psy7301 34 PAIATTTSVVAGLVCLELIKLAKGFT 59 (129)
Q Consensus 34 PAiaTTnA~Vagl~~~El~K~l~~~~ 59 (129)
+++.+|.++|++++..|++|+|.|..
T Consensus 215 ~~l~~~~g~vgslqA~EalK~L~g~g 240 (292)
T 3h8v_A 215 ASLPTTMGVVAGILVQNVLKFLLNFG 240 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCcchHHHHHHHHHHHHHHHHHhCCC
Confidence 45889999999999999999999864
No 9
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=71.63 E-value=11 Score=32.55 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=25.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHcCCCChhhcccccc
Q psy7301 36 IATTTSVVAGLVCLELIKLAKGFTDIEKYKNGFV 69 (129)
Q Consensus 36 iaTTnA~Vagl~~~El~K~l~~~~~~e~~rn~f~ 69 (129)
+..+.|++.|++..|.+|+++|. ..-.+|+|+
T Consensus 487 l~pvaA~~GGi~AQEviK~iT~q--~~Pi~n~~~ 518 (531)
T 1tt5_A 487 PHTIAAFLGGAAAQEVIKIITKQ--FVIFNNTYI 518 (531)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTC--SBCCCSCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHcCC--CccccceEE
Confidence 56778999999999999999986 444556543
No 10
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=67.44 E-value=3.6 Score=33.39 Aligned_cols=26 Identities=23% Similarity=0.369 Sum_probs=23.0
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHcCC
Q psy7301 33 IPAIATTTSVVAGLVCLELIKLAKGF 58 (129)
Q Consensus 33 IPAiaTTnA~Vagl~~~El~K~l~~~ 58 (129)
.|.+.+++++|+++++.|++|++.|.
T Consensus 291 ~gv~~~~~~iig~l~a~Ealk~l~g~ 316 (353)
T 3h5n_A 291 PATFAPVNNVAAALCAADVIKFIGKY 316 (353)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 45678889999999999999999985
No 11
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=66.23 E-value=5.1 Score=30.60 Aligned_cols=28 Identities=25% Similarity=0.433 Sum_probs=24.0
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHcCCCC
Q psy7301 33 IPAIATTTSVVAGLVCLELIKLAKGFTD 60 (129)
Q Consensus 33 IPAiaTTnA~Vagl~~~El~K~l~~~~~ 60 (129)
.+.++.+++++++++..|++|++.|..+
T Consensus 190 ~g~~~~~~~~~g~~~a~e~lk~l~g~~~ 217 (249)
T 1jw9_B 190 AGVMAPLIGVIGSLQAMEAIKMLAGYGK 217 (249)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHTCSC
T ss_pred cCCcchHHHHHHHHHHHHHHHHHhCCCC
Confidence 4567788999999999999999998643
No 12
>1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A
Probab=62.79 E-value=1.1 Score=30.92 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=24.5
Q ss_pred eEEEec----ceeeeeccCCchhHhhh--cCCcHHHH-Hhh
Q psy7301 91 TMLSQG----VCMLYSYFMPPAKREER--LNLPLVEV-VRR 124 (129)
Q Consensus 91 ~~l~~g----~~~lY~~~~~~~~~~~r--l~~~l~el-v~~ 124 (129)
.+|+.+ .+.||++..|.-+++.| |+++|.|| +++
T Consensus 35 PSltt~~~~~~k~LYmq~pp~Lee~Tr~NL~k~l~eLgl~~ 75 (98)
T 1y8x_B 35 PAITATLEGKNRTLYMQSVTSIEERTRPNLSKTLKELGLVD 75 (98)
T ss_dssp CEEEEEETTEEEEEECSSCHHHHHHHHHHHHSBSGGGTCCT
T ss_pred CeeeeecCCCCCeEEEeCcHHHHHHhHhhhhCCHHHhCCCC
Confidence 356666 89999888665555444 99999998 653
No 13
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=48.73 E-value=15 Score=27.99 Aligned_cols=27 Identities=30% Similarity=0.421 Sum_probs=23.0
Q ss_pred cchhhhhHHHHHHHHHHHHHHHcCCCC
Q psy7301 34 PAIATTTSVVAGLVCLELIKLAKGFTD 60 (129)
Q Consensus 34 PAiaTTnA~Vagl~~~El~K~l~~~~~ 60 (129)
+.++.+.+++++++..|++|++.|...
T Consensus 188 g~~~p~~~~~g~~~A~e~lk~l~g~~~ 214 (251)
T 1zud_1 188 GVVGPVVGVMGTLQALEAIKLLSGIET 214 (251)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 456778899999999999999998643
No 14
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=31.46 E-value=34 Score=27.93 Aligned_cols=25 Identities=12% Similarity=0.118 Sum_probs=21.7
Q ss_pred chhhhhHHHHHHHHHHHHHHHcCCC
Q psy7301 35 AIATTTSVVAGLVCLELIKLAKGFT 59 (129)
Q Consensus 35 AiaTTnA~Vagl~~~El~K~l~~~~ 59 (129)
-+..+.++|++++..|++|++.|..
T Consensus 219 v~~p~vg~igs~qA~E~lk~l~~~~ 243 (340)
T 3rui_A 219 VTRPGVAMMASSLAVELMTSLLQTK 243 (340)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHTSCC
T ss_pred eecchHHHHHHHHHHHHHHHHhCCC
Confidence 3567789999999999999999865
No 15
>3d24_B Peroxisome proliferator-activated receptor gamma coactivator 1-alpha; nuclear receptor, ligand binding domain, DNA- binding, metal-binding, nucleus; 2.11A {Homo sapiens}
Probab=22.32 E-value=47 Score=17.74 Aligned_cols=13 Identities=31% Similarity=0.409 Sum_probs=10.6
Q ss_pred HHHHHHHHHcCCC
Q psy7301 47 VCLELIKLAKGFT 59 (129)
Q Consensus 47 ~~~El~K~l~~~~ 59 (129)
-|.||.|+|....
T Consensus 9 pCtELlKyLTs~~ 21 (26)
T 3d24_B 9 PCSELLKYLTTND 21 (26)
T ss_pred cHHHHHHHHhcCC
Confidence 4889999998754
No 16
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=21.22 E-value=62 Score=28.75 Aligned_cols=25 Identities=12% Similarity=0.118 Sum_probs=21.9
Q ss_pred chhhhhHHHHHHHHHHHHHHHcCCC
Q psy7301 35 AIATTTSVVAGLVCLELIKLAKGFT 59 (129)
Q Consensus 35 AiaTTnA~Vagl~~~El~K~l~~~~ 59 (129)
.++++.++||+++.+|++|++.|..
T Consensus 511 Vl~P~vgiigs~qA~EaLk~Ll~~g 535 (615)
T 4gsl_A 511 VTRPGVAMMASSLAVELMTSLLQTK 535 (615)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eecchHHHHHHHHHHHHHHHHhCCC
Confidence 4677889999999999999999875
Done!