Query psy7309
Match_columns 454
No_of_seqs 346 out of 2982
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 23:30:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7309.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7309hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1035|consensus 100.0 3.3E-58 7.2E-63 491.5 18.5 365 2-452 697-1069(1351)
2 COG0124 HisS Histidyl-tRNA syn 100.0 6.3E-37 1.4E-41 308.6 16.1 153 293-453 6-168 (429)
3 PLN02972 Histidyl-tRNA synthet 100.0 5.4E-35 1.2E-39 309.8 16.0 155 291-453 327-485 (763)
4 KOG1936|consensus 100.0 3.3E-35 7.2E-40 284.6 9.5 153 293-453 62-220 (518)
5 KOG0615|consensus 100.0 3.1E-35 6.8E-40 285.3 8.9 164 3-238 277-444 (475)
6 KOG0661|consensus 100.0 6.3E-35 1.4E-39 287.5 8.7 188 2-242 110-302 (538)
7 PRK12292 hisZ ATP phosphoribos 100.0 1.3E-33 2.7E-38 287.7 14.0 154 292-453 4-165 (391)
8 KOG0598|consensus 100.0 4.4E-34 9.5E-39 275.1 7.5 173 2-259 125-301 (357)
9 KOG0660|consensus 100.0 8E-34 1.7E-38 272.4 9.0 185 3-240 126-319 (359)
10 PLN02530 histidine-tRNA ligase 100.0 5.3E-33 1.1E-37 289.9 15.0 154 292-453 71-233 (487)
11 KOG0581|consensus 100.0 1.1E-33 2.5E-38 272.3 8.9 163 4-239 180-343 (364)
12 PRK12420 histidyl-tRNA synthet 100.0 5.7E-33 1.2E-37 286.0 14.7 153 292-453 5-165 (423)
13 KOG0575|consensus 100.0 1.7E-33 3.7E-38 285.4 8.9 161 2-240 118-278 (592)
14 CHL00201 syh histidine-tRNA sy 100.0 1.8E-32 4E-37 282.1 16.4 154 292-453 5-169 (430)
15 PRK12421 ATP phosphoribosyltra 100.0 1.1E-32 2.5E-37 279.8 14.6 153 293-453 9-168 (392)
16 KOG0592|consensus 100.0 4.5E-33 9.7E-38 278.3 8.6 177 3-252 175-351 (604)
17 KOG0594|consensus 100.0 1.3E-32 2.8E-37 264.6 9.8 184 3-239 121-310 (323)
18 PF13393 tRNA-synt_His: Histid 100.0 3.9E-32 8.5E-37 269.3 12.1 144 309-453 7-156 (311)
19 KOG0659|consensus 100.0 3.7E-32 8E-37 250.7 9.3 181 2-240 101-290 (318)
20 TIGR00443 hisZ_biosyn_reg ATP 100.0 1.3E-31 2.8E-36 265.4 13.8 144 309-453 5-154 (314)
21 KOG0663|consensus 100.0 2.8E-32 6.1E-37 258.5 8.3 185 2-239 177-369 (419)
22 KOG0593|consensus 100.0 2.5E-32 5.4E-37 255.8 7.2 181 2-235 101-288 (396)
23 KOG0600|consensus 100.0 4E-32 8.7E-37 269.5 8.5 183 2-237 218-406 (560)
24 KOG0658|consensus 100.0 5.4E-32 1.2E-36 260.2 9.0 185 3-241 126-316 (364)
25 PRK12295 hisZ ATP phosphoribos 100.0 3.6E-31 7.7E-36 266.3 14.7 137 314-453 6-147 (373)
26 KOG0033|consensus 100.0 7.2E-32 1.6E-36 246.0 6.7 161 3-238 111-274 (355)
27 KOG0599|consensus 100.0 1.5E-31 3.2E-36 247.4 6.3 163 3-237 124-289 (411)
28 PRK12293 hisZ ATP phosphoribos 100.0 2.1E-30 4.6E-35 251.4 14.2 143 293-453 7-152 (281)
29 cd00773 HisRS-like_core Class 100.0 4.6E-30 1E-34 248.1 14.7 141 312-453 2-149 (261)
30 KOG0616|consensus 100.0 2.4E-31 5.3E-36 248.6 5.6 167 3-258 145-316 (355)
31 KOG0667|consensus 100.0 6.1E-31 1.3E-35 269.4 8.5 185 1-239 288-510 (586)
32 KOG0578|consensus 100.0 7.4E-31 1.6E-35 264.3 8.8 160 3-237 370-529 (550)
33 KOG0198|consensus 100.0 3.1E-30 6.6E-35 251.5 11.4 165 2-239 117-284 (313)
34 KOG0588|consensus 100.0 1.6E-30 3.4E-35 265.1 8.6 161 3-241 113-273 (786)
35 KOG0583|consensus 100.0 1.6E-30 3.4E-35 262.2 8.4 158 2-236 120-280 (370)
36 TIGR00442 hisS histidyl-tRNA s 100.0 1.8E-29 3.9E-34 258.5 15.5 152 294-453 3-164 (397)
37 KOG0694|consensus 100.0 2.4E-30 5.1E-35 265.4 8.0 172 2-259 468-644 (694)
38 KOG0591|consensus 100.0 7.7E-31 1.7E-35 243.6 3.2 147 3-225 125-275 (375)
39 COG3705 HisZ ATP phosphoribosy 100.0 1.1E-29 2.3E-34 251.5 10.5 153 293-453 5-162 (390)
40 KOG0671|consensus 100.0 2.1E-29 4.6E-34 242.9 12.4 187 1-237 191-412 (415)
41 KOG0605|consensus 100.0 1.1E-29 2.4E-34 254.1 8.1 194 2-254 241-460 (550)
42 KOG0582|consensus 100.0 1.5E-29 3.3E-34 247.9 7.7 175 3-240 127-302 (516)
43 KOG0665|consensus 100.0 4.4E-29 9.5E-34 235.8 9.9 186 2-237 118-316 (369)
44 PRK00037 hisS histidyl-tRNA sy 100.0 3.7E-28 8.1E-33 250.0 15.6 151 293-452 6-164 (412)
45 KOG0986|consensus 100.0 3E-29 6.5E-34 245.9 6.4 179 2-259 287-470 (591)
46 cd05571 STKc_PKB Catalytic dom 100.0 1.7E-28 3.7E-33 244.3 10.0 158 2-237 95-257 (323)
47 KOG0597|consensus 100.0 6E-29 1.3E-33 249.2 6.5 160 2-239 100-259 (808)
48 KOG0579|consensus 99.9 1.3E-28 2.7E-33 248.9 8.0 166 2-239 130-297 (1187)
49 cd07862 STKc_CDK6 Catalytic do 99.9 1.3E-28 2.8E-33 240.5 7.4 176 2-234 110-290 (290)
50 KOG0585|consensus 99.9 1.3E-28 2.8E-33 242.8 7.3 172 2-241 210-382 (576)
51 KOG0666|consensus 99.9 2.1E-28 4.6E-33 230.1 8.0 186 3-240 133-346 (438)
52 cd07868 STKc_CDK8 Catalytic do 99.9 2.2E-28 4.8E-33 242.2 7.5 182 3-234 109-317 (317)
53 PHA03212 serine/threonine kina 99.9 3.1E-28 6.6E-33 249.0 8.2 184 2-238 182-383 (391)
54 cd07871 STKc_PCTAIRE3 Catalyti 99.9 1.7E-28 3.7E-33 240.1 6.0 181 2-234 103-288 (288)
55 cd07848 STKc_CDKL5 Catalytic d 99.9 4.3E-28 9.3E-33 236.4 8.2 183 2-234 100-287 (287)
56 KOG0201|consensus 99.9 9.9E-29 2.1E-33 242.0 3.6 156 5-237 114-269 (467)
57 KOG0669|consensus 99.9 4.4E-28 9.5E-33 222.2 7.6 193 2-238 124-322 (376)
58 cd07869 STKc_PFTAIRE1 Catalyti 99.9 4.4E-28 9.5E-33 238.8 7.3 186 2-239 103-296 (303)
59 PTZ00036 glycogen synthase kin 99.9 2.8E-28 6E-33 253.0 6.1 183 3-239 171-359 (440)
60 cd07874 STKc_JNK3 Catalytic do 99.9 1.2E-27 2.7E-32 241.1 10.6 187 2-238 119-318 (355)
61 cd05631 STKc_GRK4 Catalytic do 99.9 3.8E-28 8.2E-33 237.3 6.4 158 2-238 102-268 (285)
62 PTZ00284 protein kinase; Provi 99.9 3.1E-28 6.8E-33 254.6 6.1 185 2-239 231-446 (467)
63 cd07875 STKc_JNK1 Catalytic do 99.9 1.1E-27 2.4E-32 242.3 9.3 186 2-238 126-325 (364)
64 cd07859 STKc_TDY_MAPK_plant Ca 99.9 1.2E-27 2.6E-32 238.7 9.3 184 2-239 103-298 (338)
65 cd05594 STKc_PKB_alpha Catalyt 99.9 2.3E-27 5E-32 236.3 10.9 158 2-237 95-258 (325)
66 cd05585 STKc_YPK1_like Catalyt 99.9 9.7E-28 2.1E-32 237.6 8.0 158 2-237 93-253 (312)
67 cd07863 STKc_CDK4 Catalytic do 99.9 1.2E-27 2.5E-32 233.3 8.3 176 2-234 108-288 (288)
68 cd05586 STKc_Sck1_like Catalyt 99.9 2.7E-27 6E-32 236.1 10.8 160 2-237 96-259 (330)
69 cd07876 STKc_JNK2 Catalytic do 99.9 1.9E-27 4E-32 240.2 9.6 186 2-238 123-322 (359)
70 cd05593 STKc_PKB_gamma Catalyt 99.9 1.4E-27 3.1E-32 238.3 8.6 157 2-236 95-256 (328)
71 KOG0604|consensus 99.9 1.8E-27 3.9E-32 222.9 8.5 165 3-238 162-329 (400)
72 cd05590 STKc_nPKC_eta Catalyti 99.9 1.6E-27 3.5E-32 237.0 7.9 158 2-237 96-259 (320)
73 PTZ00263 protein kinase A cata 99.9 1.6E-27 3.5E-32 237.9 7.7 154 2-236 118-276 (329)
74 PHA03209 serine/threonine kina 99.9 1.1E-27 2.4E-32 241.9 6.4 181 2-236 157-356 (357)
75 KOG0595|consensus 99.9 1.7E-27 3.6E-32 231.7 7.2 162 3-240 110-277 (429)
76 cd05575 STKc_SGK Catalytic dom 99.9 3.4E-27 7.5E-32 234.8 9.6 157 2-236 96-256 (323)
77 cd05595 STKc_PKB_beta Catalyti 99.9 1.8E-27 4E-32 236.9 7.5 158 2-237 95-257 (323)
78 KOG0610|consensus 99.9 4.6E-27 1E-31 228.8 10.0 186 2-238 179-399 (459)
79 cd05614 STKc_MSK2_N N-terminal 99.9 4E-27 8.7E-32 235.0 9.3 164 2-237 105-273 (332)
80 cd05612 STKc_PRKX_like Catalyt 99.9 2E-27 4.4E-32 232.9 7.0 154 2-236 101-259 (291)
81 KOG0596|consensus 99.9 3.2E-27 6.9E-32 236.6 8.2 164 3-235 461-631 (677)
82 cd05591 STKc_nPKC_epsilon Cata 99.9 3.1E-27 6.7E-32 235.0 8.0 157 2-236 96-259 (321)
83 cd05620 STKc_nPKC_delta Cataly 99.9 2.3E-27 4.9E-32 235.5 7.0 158 2-237 96-254 (316)
84 PTZ00426 cAMP-dependent protei 99.9 3.8E-27 8.3E-32 236.5 8.5 154 2-236 131-289 (340)
85 KOG0577|consensus 99.9 1E-26 2.2E-31 233.9 11.4 196 3-295 127-322 (948)
86 cd07878 STKc_p38beta_MAPK11 Ca 99.9 3.6E-27 7.8E-32 236.4 8.3 180 2-239 118-306 (343)
87 KOG0662|consensus 99.9 5.7E-27 1.2E-31 205.1 8.3 182 2-237 101-289 (292)
88 PHA03211 serine/threonine kina 99.9 2.8E-27 6E-32 246.0 7.2 185 2-236 260-460 (461)
89 cd05584 STKc_p70S6K Catalytic 99.9 6.4E-27 1.4E-31 233.0 9.3 157 3-237 101-262 (323)
90 cd05616 STKc_cPKC_beta Catalyt 99.9 4.5E-27 9.8E-32 234.0 8.1 157 2-236 101-262 (323)
91 PHA03207 serine/threonine kina 99.9 4.1E-27 8.8E-32 240.8 7.8 184 2-240 185-384 (392)
92 cd05602 STKc_SGK1 Catalytic do 99.9 6.9E-27 1.5E-31 232.9 8.8 167 3-255 97-267 (325)
93 cd07867 STKc_CDC2L6 Catalytic 99.9 5.6E-27 1.2E-31 231.8 8.0 182 3-234 109-317 (317)
94 cd05589 STKc_PKN Catalytic dom 99.9 5.7E-27 1.2E-31 233.3 7.6 158 2-237 101-263 (324)
95 cd05587 STKc_cPKC Catalytic do 99.9 5.4E-27 1.2E-31 233.5 7.4 158 2-237 101-263 (324)
96 KOG0032|consensus 99.9 9.1E-27 2E-31 235.1 9.1 162 3-239 136-301 (382)
97 cd05592 STKc_nPKC_theta_delta 99.9 6E-27 1.3E-31 232.5 7.4 158 2-237 96-254 (316)
98 cd05588 STKc_aPKC Catalytic do 99.9 7.5E-27 1.6E-31 233.1 8.0 166 2-236 96-267 (329)
99 KOG0983|consensus 99.9 1.7E-26 3.7E-31 214.0 9.6 159 5-236 194-354 (391)
100 cd05604 STKc_SGK3 Catalytic do 99.9 1.4E-26 3E-31 230.7 9.5 158 2-237 96-257 (325)
101 cd05618 STKc_aPKC_iota Catalyt 99.9 8.6E-27 1.9E-31 232.8 8.0 165 2-236 96-267 (329)
102 cd05603 STKc_SGK2 Catalytic do 99.9 1.7E-26 3.7E-31 229.5 10.0 157 2-236 96-256 (321)
103 PHA03210 serine/threonine kina 99.9 6.7E-27 1.5E-31 246.4 7.2 184 3-238 268-461 (501)
104 cd05570 STKc_PKC Catalytic dom 99.9 6.3E-27 1.4E-31 232.5 6.5 158 2-237 96-258 (318)
105 cd05608 STKc_GRK1 Catalytic do 99.9 7.8E-27 1.7E-31 227.4 7.0 157 2-236 97-262 (280)
106 cd05619 STKc_nPKC_theta Cataly 99.9 6.8E-27 1.5E-31 232.2 6.4 158 2-237 96-254 (316)
107 cd05582 STKc_RSK_N N-terminal 99.9 2.2E-26 4.8E-31 228.4 10.0 157 2-236 98-259 (318)
108 cd05627 STKc_NDR2 Catalytic do 99.9 2.2E-26 4.7E-31 232.6 10.1 184 2-236 101-298 (360)
109 cd05617 STKc_aPKC_zeta Catalyt 99.9 1.2E-26 2.7E-31 231.4 7.7 164 2-237 96-266 (327)
110 KOG0603|consensus 99.9 1.1E-26 2.4E-31 237.3 7.5 150 3-235 416-567 (612)
111 cd05601 STKc_CRIK Catalytic do 99.9 3.1E-26 6.8E-31 228.4 10.6 164 2-237 102-269 (330)
112 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 3.2E-26 6.9E-31 228.7 10.5 162 2-237 101-263 (333)
113 cd07853 STKc_NLK Catalytic dom 99.9 1.2E-26 2.6E-31 235.5 7.3 184 2-238 103-295 (372)
114 PLN03225 Serine/threonine-prot 99.9 4.1E-26 8.9E-31 242.7 11.6 180 4-240 257-459 (566)
115 cd05573 STKc_ROCK_NDR_like Cat 99.9 2.5E-26 5.4E-31 230.6 9.3 184 2-236 101-290 (350)
116 cd05628 STKc_NDR1 Catalytic do 99.9 2.2E-26 4.7E-31 232.9 8.5 185 2-237 101-299 (363)
117 KOG0589|consensus 99.9 1.5E-26 3.2E-31 231.6 6.8 158 2-236 106-263 (426)
118 PTZ00283 serine/threonine prot 99.9 1.3E-26 2.7E-31 243.9 6.5 161 3-238 144-304 (496)
119 cd07872 STKc_PCTAIRE2 Catalyti 99.9 1.4E-26 3.1E-31 228.6 6.4 186 2-239 104-294 (309)
120 KOG0690|consensus 99.9 1.3E-26 2.9E-31 219.0 5.5 172 2-259 268-444 (516)
121 cd05596 STKc_ROCK Catalytic do 99.9 3E-26 6.5E-31 232.6 8.4 164 3-237 143-310 (370)
122 cd07839 STKc_CDK5 Catalytic do 99.9 2.7E-26 5.9E-31 223.2 7.4 180 2-234 99-284 (284)
123 KOG0192|consensus 99.9 2.8E-26 6.1E-31 229.7 7.6 154 2-230 142-298 (362)
124 KOG4645|consensus 99.9 2.8E-26 6E-31 248.2 7.6 167 4-239 1336-1502(1509)
125 cd05621 STKc_ROCK2 Catalytic d 99.9 3.8E-26 8.3E-31 231.9 8.0 165 2-237 142-310 (370)
126 KOG0664|consensus 99.9 2.6E-26 5.6E-31 212.6 6.0 187 2-239 156-351 (449)
127 PLN00034 mitogen-activated pro 99.9 4.2E-26 9.1E-31 229.9 8.1 166 3-239 169-336 (353)
128 cd05615 STKc_cPKC_alpha Cataly 99.9 3.6E-26 7.8E-31 227.6 7.5 158 2-237 101-263 (323)
129 cd05598 STKc_LATS Catalytic do 99.9 1.3E-25 2.9E-30 228.1 11.3 184 3-237 102-307 (376)
130 KOG0580|consensus 99.9 1.9E-26 4.1E-31 210.2 3.8 155 3-237 125-279 (281)
131 PTZ00267 NIMA-related protein 99.9 3.5E-26 7.6E-31 239.8 6.4 160 3-237 170-329 (478)
132 cd05599 STKc_NDR_like Catalyti 99.9 9.3E-26 2E-30 228.0 8.3 185 2-237 101-302 (364)
133 KOG4279|consensus 99.9 1.6E-25 3.4E-30 228.7 9.8 164 3-240 676-841 (1226)
134 KOG0670|consensus 99.9 1.3E-25 2.9E-30 223.3 9.0 185 1-236 535-751 (752)
135 KOG0574|consensus 99.9 9.1E-27 2E-31 218.1 0.7 164 2-240 129-292 (502)
136 PRK12294 hisZ ATP phosphoribos 99.9 5.6E-25 1.2E-29 211.5 13.1 131 313-453 8-144 (272)
137 cd05625 STKc_LATS1 Catalytic d 99.9 1.4E-25 3.1E-30 228.5 9.3 184 3-237 102-311 (382)
138 KOG0611|consensus 99.9 1.1E-25 2.4E-30 218.0 7.9 160 3-242 154-314 (668)
139 cd07857 STKc_MPK1 Catalytic do 99.9 2E-25 4.2E-30 223.0 9.8 184 2-240 105-301 (332)
140 cd08223 STKc_Nek4 Catalytic do 99.9 1.5E-25 3.2E-30 214.5 8.4 156 2-234 102-257 (257)
141 cd05629 STKc_NDR_like_fungal C 99.9 1.5E-25 3.4E-30 227.8 9.0 183 3-236 102-310 (377)
142 cd07873 STKc_PCTAIRE1 Catalyti 99.9 1.5E-25 3.3E-30 220.4 7.8 185 2-238 104-293 (301)
143 cd06643 STKc_SLK Catalytic dom 99.9 3E-25 6.4E-30 216.0 9.5 167 2-240 103-271 (282)
144 KOG0614|consensus 99.9 8.5E-26 1.8E-30 224.1 5.6 170 3-258 521-696 (732)
145 cd07861 STKc_CDK1_euk Catalyti 99.9 1.3E-25 2.8E-30 218.4 6.7 179 2-234 101-285 (285)
146 cd05626 STKc_LATS2 Catalytic d 99.9 2.2E-25 4.7E-30 227.1 8.7 185 3-237 102-311 (381)
147 cd06649 PKc_MEK2 Catalytic dom 99.9 3.2E-25 6.9E-30 221.5 9.7 172 3-237 104-307 (331)
148 KOG0584|consensus 99.9 1.1E-25 2.4E-30 229.1 5.9 158 2-239 143-304 (632)
149 cd05605 STKc_GRK4_like Catalyt 99.9 1.7E-25 3.6E-30 218.6 6.9 156 2-236 102-266 (285)
150 cd07850 STKc_JNK Catalytic dom 99.9 2.5E-25 5.5E-30 224.1 8.2 188 2-239 118-319 (353)
151 cd07865 STKc_CDK9 Catalytic do 99.9 1.9E-25 4.1E-30 219.7 7.2 188 2-234 119-310 (310)
152 cd05622 STKc_ROCK1 Catalytic d 99.9 2.5E-25 5.4E-30 226.0 8.2 164 3-237 143-310 (371)
153 cd05607 STKc_GRK7 Catalytic do 99.9 1.6E-25 3.6E-30 217.7 6.6 161 2-236 95-259 (277)
154 cd06658 STKc_PAK5 Catalytic do 99.9 2.2E-25 4.7E-30 218.8 6.7 164 2-240 118-281 (292)
155 cd05630 STKc_GRK6 Catalytic do 99.9 1.8E-25 3.9E-30 218.4 5.9 158 2-237 102-267 (285)
156 cd06637 STKc_TNIK Catalytic do 99.9 3.8E-25 8.2E-30 213.6 7.7 159 3-234 112-272 (272)
157 KOG4236|consensus 99.9 1.8E-25 3.9E-30 222.4 5.3 155 4-237 666-825 (888)
158 cd07870 STKc_PFTAIRE2 Catalyti 99.9 7.6E-25 1.7E-29 214.1 9.7 180 2-234 103-291 (291)
159 cd05102 PTKc_VEGFR3 Catalytic 99.9 3.8E-25 8.3E-30 221.2 7.2 154 2-230 174-329 (338)
160 cd07849 STKc_ERK1_2_like Catal 99.9 8.5E-25 1.8E-29 218.7 9.5 191 2-240 106-301 (336)
161 cd05623 STKc_MRCK_alpha Cataly 99.9 5.7E-25 1.2E-29 219.8 8.2 164 3-236 103-271 (332)
162 cd05632 STKc_GRK5 Catalytic do 99.9 3.1E-25 6.7E-30 216.7 6.1 159 2-239 102-269 (285)
163 cd06625 STKc_MEKK3_like Cataly 99.9 6.1E-25 1.3E-29 210.9 7.7 158 3-234 105-263 (263)
164 cd06655 STKc_PAK2 Catalytic do 99.9 6.7E-25 1.4E-29 215.7 8.1 163 2-239 115-277 (296)
165 cd07845 STKc_CDK10 Catalytic d 99.9 5.2E-25 1.1E-29 217.4 6.5 185 2-238 108-297 (309)
166 KOG4717|consensus 99.9 9.9E-25 2.1E-29 216.7 8.4 183 3-272 119-303 (864)
167 cd07843 STKc_CDC2L1 Catalytic 99.9 9.6E-25 2.1E-29 213.6 8.2 182 2-234 106-293 (293)
168 KOG0607|consensus 99.9 7.7E-25 1.7E-29 206.8 7.1 179 3-238 177-368 (463)
169 cd06636 STKc_MAP4K4_6 Catalyti 99.9 1.1E-24 2.4E-29 211.8 8.6 159 3-234 122-282 (282)
170 cd05597 STKc_DMPK_like Catalyt 99.9 1.1E-24 2.3E-29 217.8 8.5 165 3-237 103-272 (331)
171 KOG0696|consensus 99.9 6E-25 1.3E-29 213.4 6.3 171 3-259 451-626 (683)
172 cd06644 STKc_STK10_LOK Catalyt 99.9 1.5E-24 3.4E-29 212.1 9.3 165 2-238 110-276 (292)
173 cd06639 STKc_myosinIIIB Cataly 99.9 1.2E-24 2.7E-29 212.6 8.5 162 2-235 128-291 (291)
174 cd06628 STKc_MAPKKK_Byr2_like 99.9 1.4E-24 3E-29 209.1 8.4 162 2-234 106-267 (267)
175 cd08529 STKc_FA2-like Catalyti 99.9 1.5E-24 3.2E-29 207.2 8.4 156 2-234 101-256 (256)
176 cd07832 STKc_CCRK Catalytic do 99.9 1.4E-24 3.1E-29 211.0 8.3 183 2-235 99-286 (286)
177 cd06654 STKc_PAK1 Catalytic do 99.9 1.2E-24 2.7E-29 213.7 7.9 162 2-238 116-277 (296)
178 cd06645 STKc_MAP4K3 Catalytic 99.9 1.3E-24 2.9E-29 209.4 7.9 162 2-233 106-267 (267)
179 cd07851 STKc_p38 Catalytic dom 99.9 2.2E-24 4.7E-29 216.5 9.8 178 2-240 118-307 (343)
180 cd06610 STKc_OSR1_SPAK Catalyt 99.9 1.7E-24 3.7E-29 207.9 8.5 165 3-234 103-267 (267)
181 cd06609 STKc_MST3_like Catalyt 99.9 1.1E-24 2.5E-29 210.8 7.3 162 2-239 98-259 (274)
182 cd06608 STKc_myosinIII_like Ca 99.9 1.1E-24 2.5E-29 209.9 7.3 161 2-234 113-275 (275)
183 cd06612 STKc_MST1_2 Catalytic 99.9 1.2E-24 2.5E-29 208.0 6.9 158 2-234 99-256 (256)
184 KOG0197|consensus 99.9 1.6E-24 3.4E-29 217.9 8.0 153 2-229 303-455 (468)
185 cd06648 STKc_PAK_II Catalytic 99.9 2E-24 4.4E-29 210.9 8.5 163 2-239 115-277 (285)
186 cd05624 STKc_MRCK_beta Catalyt 99.9 1.9E-24 4.2E-29 215.9 8.4 164 3-236 103-271 (331)
187 cd07855 STKc_ERK5 Catalytic do 99.9 1.9E-24 4.2E-29 216.0 8.3 189 2-240 107-303 (334)
188 cd06659 STKc_PAK6 Catalytic do 99.9 1.6E-24 3.6E-29 213.0 7.6 162 2-238 117-278 (297)
189 cd06611 STKc_SLK_like Catalyti 99.9 1.8E-24 4E-29 210.0 7.7 164 2-237 103-268 (280)
190 cd06638 STKc_myosinIIIA Cataly 99.9 2.6E-24 5.7E-29 209.5 8.8 160 3-234 125-286 (286)
191 cd06616 PKc_MKK4 Catalytic dom 99.9 1.8E-24 4E-29 210.9 7.6 165 3-237 108-273 (288)
192 cd06633 STKc_TAO3 Catalytic do 99.9 5.8E-24 1.3E-28 210.7 11.1 193 2-291 121-313 (313)
193 cd05576 STKc_RPK118_like Catal 99.9 9.8E-25 2.1E-29 207.4 5.3 148 2-234 85-237 (237)
194 cd06650 PKc_MEK1 Catalytic dom 99.9 9.7E-25 2.1E-29 218.3 5.5 95 3-143 104-199 (333)
195 KOG0612|consensus 99.9 9.5E-25 2.1E-29 233.8 5.7 162 3-237 176-344 (1317)
196 cd07860 STKc_CDK2_3 Catalytic 99.9 2.2E-24 4.8E-29 209.8 7.8 179 2-234 100-284 (284)
197 cd06619 PKc_MKK5 Catalytic dom 99.9 2E-24 4.4E-29 210.1 7.6 165 3-238 96-260 (279)
198 PLN00181 protein SPA1-RELATED; 99.9 8.5E-25 1.8E-29 242.6 5.5 181 2-238 80-272 (793)
199 KOG4721|consensus 99.9 1.2E-24 2.6E-29 218.3 6.0 152 4-232 214-365 (904)
200 cd07834 STKc_MAPK Catalytic do 99.9 3.9E-24 8.4E-29 213.0 9.7 187 2-240 103-298 (330)
201 cd06607 STKc_TAO Catalytic dom 99.9 9.2E-24 2E-28 208.4 12.3 192 2-290 115-306 (307)
202 cd07837 STKc_CdkB_plant Cataly 99.9 2.3E-24 5E-29 210.8 7.2 180 2-235 110-295 (295)
203 cd05633 STKc_GRK3 Catalytic do 99.9 1.7E-24 3.6E-29 211.0 6.1 158 2-237 97-261 (279)
204 cd07879 STKc_p38delta_MAPK13 C 99.9 4.7E-24 1E-28 214.0 9.2 179 2-239 117-305 (342)
205 cd05048 PTKc_Ror Catalytic Dom 99.9 2E-24 4.4E-29 209.9 6.3 154 3-231 125-279 (283)
206 cd05606 STKc_beta_ARK Catalyti 99.9 3.3E-24 7.1E-29 208.7 7.7 159 2-238 97-262 (278)
207 cd07831 STKc_MOK Catalytic dom 99.9 3.7E-24 8.1E-29 207.6 8.0 176 2-234 100-282 (282)
208 cd07841 STKc_CDK7 Catalytic do 99.9 2.8E-24 6.2E-29 210.6 7.2 185 2-240 102-291 (298)
209 cd07844 STKc_PCTAIRE_like Cata 99.9 4.2E-24 9.2E-29 208.7 8.3 182 2-234 103-291 (291)
210 cd07847 STKc_CDKL1_4 Catalytic 99.9 3.2E-24 7E-29 208.5 7.2 182 2-234 100-286 (286)
211 cd07833 STKc_CDKL Catalytic do 99.9 5E-24 1.1E-28 207.3 8.5 183 2-234 100-288 (288)
212 cd06617 PKc_MKK3_6 Catalytic d 99.9 4.5E-24 9.8E-29 207.3 8.1 164 2-239 103-269 (283)
213 cd06656 STKc_PAK3 Catalytic do 99.9 2.3E-24 5E-29 211.9 6.0 162 2-238 115-276 (297)
214 cd07838 STKc_CDK4_6_like Catal 99.9 4.3E-24 9.4E-29 207.5 7.5 176 2-234 107-287 (287)
215 cd07858 STKc_TEY_MAPK_plant Ca 99.9 6.1E-24 1.3E-28 212.7 8.8 180 2-239 108-299 (337)
216 cd05091 PTKc_Ror2 Catalytic do 99.9 3.3E-24 7E-29 208.6 6.6 153 3-230 125-278 (283)
217 cd08227 PK_STRAD_alpha Pseudok 99.9 4.2E-24 9.1E-29 212.9 7.5 108 2-144 101-208 (327)
218 cd08220 STKc_Nek8 Catalytic do 99.9 5.1E-24 1.1E-28 203.5 7.7 155 2-234 101-256 (256)
219 cd08217 STKc_Nek2 Catalytic do 99.9 4E-24 8.7E-29 204.7 6.9 156 2-234 105-265 (265)
220 cd08216 PK_STRAD Pseudokinase 99.9 6E-24 1.3E-28 210.0 8.4 194 3-238 102-302 (314)
221 cd08218 STKc_Nek1 Catalytic do 99.9 3.9E-24 8.4E-29 204.7 6.7 155 3-234 102-256 (256)
222 PF00069 Pkinase: Protein kina 99.9 4.8E-25 1E-29 210.9 0.0 163 2-234 98-260 (260)
223 cd06651 STKc_MEKK3 Catalytic d 99.9 5.3E-24 1.2E-28 205.4 7.2 159 2-235 106-265 (266)
224 cd07842 STKc_CDK8_like Catalyt 99.9 4.3E-24 9.3E-29 210.8 6.4 184 3-234 109-316 (316)
225 cd05574 STKc_phototropin_like 99.9 7.5E-24 1.6E-28 209.6 8.1 185 3-238 104-296 (316)
226 cd07835 STKc_CDK1_like Catalyt 99.9 7.1E-24 1.5E-28 206.1 7.8 175 2-234 99-283 (283)
227 cd05572 STKc_cGK_PKG Catalytic 99.9 1E-23 2.2E-28 202.7 8.6 157 2-236 93-257 (262)
228 cd07866 STKc_BUR1 Catalytic do 99.9 8E-24 1.7E-28 208.2 7.9 190 2-234 115-311 (311)
229 cd06631 STKc_YSK4 Catalytic do 99.9 1.1E-23 2.5E-28 202.7 8.7 164 2-234 102-265 (265)
230 cd07877 STKc_p38alpha_MAPK14 C 99.9 8.3E-24 1.8E-28 212.6 8.0 178 2-240 120-309 (345)
231 cd06605 PKc_MAPKK Catalytic do 99.9 4.3E-24 9.3E-29 205.3 5.6 162 2-236 100-262 (265)
232 cd06613 STKc_MAP4K3_like Catal 99.9 8.2E-24 1.8E-28 202.8 7.5 162 2-233 101-262 (262)
233 cd06917 STKc_NAK1_like Catalyt 99.9 7E-24 1.5E-28 205.5 7.0 163 2-239 101-263 (277)
234 cd05580 STKc_PKA Catalytic dom 99.9 1.1E-23 2.4E-28 206.1 8.4 155 2-237 101-260 (290)
235 cd06646 STKc_MAP4K5 Catalytic 99.9 7.1E-24 1.5E-28 204.3 6.9 162 2-233 106-267 (267)
236 cd08215 STKc_Nek Catalytic dom 99.9 9.8E-24 2.1E-28 201.0 7.7 156 2-234 103-258 (258)
237 cd06630 STKc_MEKK1 Catalytic d 99.9 8.6E-24 1.9E-28 203.5 7.3 164 2-235 103-268 (268)
238 cd08219 STKc_Nek3 Catalytic do 99.9 1.8E-23 3.8E-28 200.2 9.3 152 2-230 100-251 (255)
239 KOG1027|consensus 99.9 1.1E-23 2.4E-28 220.0 8.5 159 4-236 608-772 (903)
240 KOG2345|consensus 99.9 2.7E-24 5.9E-29 197.0 3.4 166 3-231 128-296 (302)
241 cd05577 STKc_GRK Catalytic dom 99.9 1.1E-23 2.3E-28 204.6 7.8 170 2-258 95-273 (277)
242 cd06642 STKc_STK25-YSK1 Cataly 99.9 5.6E-24 1.2E-28 206.4 5.5 159 2-237 101-259 (277)
243 cd08221 STKc_Nek9 Catalytic do 99.9 1.4E-23 3E-28 200.8 8.1 156 2-234 101-256 (256)
244 cd05075 PTKc_Axl Catalytic dom 99.9 7.9E-24 1.7E-28 204.4 6.3 153 3-230 113-266 (272)
245 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 1.2E-23 2.5E-28 205.0 7.5 162 2-239 102-270 (286)
246 cd06635 STKc_TAO1 Catalytic do 99.9 3.7E-23 8E-28 205.2 11.1 192 2-290 125-316 (317)
247 cd05108 PTKc_EGFR Catalytic do 99.9 1E-23 2.3E-28 209.0 7.1 154 3-231 110-264 (316)
248 cd05054 PTKc_VEGFR Catalytic d 99.9 9.3E-24 2E-28 211.7 6.8 155 2-231 173-329 (337)
249 cd06657 STKc_PAK4 Catalytic do 99.9 1.2E-23 2.6E-28 206.5 7.3 163 2-239 116-278 (292)
250 PHA02988 hypothetical protein; 99.9 1.5E-23 3.3E-28 204.9 8.0 151 2-230 122-274 (283)
251 cd07854 STKc_MAPK4_6 Catalytic 99.9 1.2E-23 2.6E-28 211.1 7.3 185 2-238 114-307 (342)
252 cd05106 PTKc_CSF-1R Catalytic 99.9 8.3E-24 1.8E-28 215.0 6.2 154 2-230 212-367 (374)
253 PHA03390 pk1 serine/threonine- 99.9 1E-23 2.2E-28 204.2 6.4 151 2-235 109-266 (267)
254 cd05053 PTKc_FGFR Catalytic do 99.9 1.8E-23 3.9E-28 204.4 8.2 155 2-231 132-287 (293)
255 cd07836 STKc_Pho85 Catalytic d 99.9 1.4E-23 3E-28 204.0 7.2 180 2-234 100-284 (284)
256 PHA02882 putative serine/threo 99.9 7E-24 1.5E-28 208.2 5.1 160 3-230 127-291 (294)
257 cd05611 STKc_Rim15_like Cataly 99.9 1.6E-23 3.4E-28 201.1 7.2 157 2-236 97-256 (260)
258 cd05052 PTKc_Abl Catalytic dom 99.9 1.6E-23 3.4E-28 201.8 7.2 152 3-230 105-257 (263)
259 cd07829 STKc_CDK_like Catalyti 99.9 1.5E-23 3.3E-28 203.2 7.1 180 2-234 98-282 (282)
260 cd05032 PTKc_InsR_like Catalyt 99.9 2.5E-23 5.3E-28 201.5 8.5 153 3-230 120-273 (277)
261 cd06615 PKc_MEK Catalytic doma 99.9 2E-23 4.4E-28 206.2 8.1 173 3-238 100-294 (308)
262 cd05089 PTKc_Tie1 Catalytic do 99.9 1.8E-23 4E-28 205.3 7.7 151 3-231 120-271 (297)
263 cd05118 STKc_CMGC Catalytic do 99.9 9E-24 2E-28 204.9 5.5 181 2-234 98-283 (283)
264 cd05061 PTKc_InsR Catalytic do 99.9 1.7E-23 3.6E-28 204.5 7.4 159 3-236 120-285 (288)
265 cd05062 PTKc_IGF-1R Catalytic 99.9 1.2E-23 2.5E-28 204.3 6.2 154 3-231 120-274 (277)
266 cd06640 STKc_MST4 Catalytic do 99.9 1.2E-23 2.6E-28 204.3 6.2 159 3-238 102-260 (277)
267 cd05096 PTKc_DDR1 Catalytic do 99.9 8.7E-24 1.9E-28 208.2 5.3 98 2-141 138-235 (304)
268 cd06647 STKc_PAK_I Catalytic d 99.9 1.3E-23 2.7E-28 206.2 6.4 162 2-238 115-276 (293)
269 cd06634 STKc_TAO2 Catalytic do 99.9 4E-23 8.6E-28 204.1 10.0 159 2-237 115-273 (308)
270 cd06624 STKc_ASK Catalytic dom 99.9 1.9E-23 4.1E-28 201.7 7.4 159 3-234 109-268 (268)
271 cd06618 PKc_MKK7 Catalytic dom 99.9 4.1E-23 8.9E-28 202.6 9.9 161 3-236 115-278 (296)
272 PRK00413 thrS threonyl-tRNA sy 99.9 6E-23 1.3E-27 222.4 12.2 155 289-451 254-423 (638)
273 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 2.2E-23 4.9E-28 203.1 8.0 169 2-230 109-278 (284)
274 cd05035 PTKc_Axl_like Catalyti 99.9 2E-23 4.3E-28 201.4 7.3 153 3-230 114-267 (273)
275 cd07830 STKc_MAK_like Catalyti 99.9 4.7E-23 1E-27 200.2 10.0 180 2-234 99-283 (283)
276 cd06632 STKc_MEKK1_plant Catal 99.9 2.2E-23 4.7E-28 199.2 7.5 155 2-234 102-258 (258)
277 cd05049 PTKc_Trk Catalytic dom 99.9 2.3E-23 4.9E-28 202.1 7.4 154 2-230 122-276 (280)
278 cd06626 STKc_MEKK4 Catalytic d 99.9 4.1E-23 8.8E-28 198.2 9.0 165 2-234 99-264 (264)
279 PLN00009 cyclin-dependent kina 99.9 2.4E-23 5.2E-28 203.8 7.3 181 3-237 103-290 (294)
280 cd05094 PTKc_TrkC Catalytic do 99.9 2.2E-23 4.7E-28 204.1 7.0 154 2-230 123-277 (291)
281 cd05578 STKc_Yank1 Catalytic d 99.9 2.9E-23 6.4E-28 199.0 7.8 154 2-234 100-258 (258)
282 cd08225 STKc_Nek5 Catalytic do 99.9 2.4E-23 5.2E-28 199.0 7.1 155 3-234 102-257 (257)
283 cd07840 STKc_CDK9_like Catalyt 99.9 1.6E-23 3.5E-28 203.3 6.0 180 2-234 100-287 (287)
284 cd05116 PTKc_Syk Catalytic dom 99.9 2E-23 4.4E-28 200.3 6.5 155 2-230 95-250 (257)
285 cd05093 PTKc_TrkB Catalytic do 99.9 2.1E-23 4.5E-28 203.8 6.7 154 2-230 120-274 (288)
286 cd05109 PTKc_HER2 Catalytic do 99.9 2.3E-23 5E-28 202.4 6.9 154 2-230 109-263 (279)
287 cd05111 PTK_HER3 Pseudokinase 99.9 2.9E-23 6.2E-28 202.1 7.5 154 2-230 109-263 (279)
288 cd07852 STKc_MAPK15 Catalytic 99.9 7.4E-23 1.6E-27 204.7 10.7 183 3-239 108-303 (337)
289 cd06627 STKc_Cdc7_like Catalyt 99.9 3E-23 6.5E-28 197.6 7.4 156 2-234 99-254 (254)
290 cd07846 STKc_CDKL2_3 Catalytic 99.9 3E-23 6.6E-28 201.8 7.6 182 2-234 100-286 (286)
291 PTZ00266 NIMA-related protein 99.9 1.5E-23 3.3E-28 229.9 6.1 161 2-239 118-303 (1021)
292 cd00192 PTKc Catalytic domain 99.9 3.6E-23 7.9E-28 197.5 8.0 155 2-231 105-260 (262)
293 cd05579 STKc_MAST_like Catalyt 99.9 3.1E-23 6.8E-28 198.5 7.4 167 2-236 93-262 (265)
294 KOG1290|consensus 99.9 2.6E-23 5.7E-28 205.9 7.0 127 83-240 407-559 (590)
295 KOG0695|consensus 99.9 2.4E-23 5.2E-28 197.7 6.5 181 2-260 351-537 (593)
296 cd05101 PTKc_FGFR2 Catalytic d 99.9 3.1E-23 6.8E-28 204.2 7.4 153 3-230 138-291 (304)
297 cd05082 PTKc_Csk Catalytic dom 99.9 3E-23 6.4E-28 198.9 7.0 149 2-230 102-251 (256)
298 cd07864 STKc_CDK12 Catalytic d 99.9 2.6E-23 5.6E-28 204.1 6.5 182 2-234 116-302 (302)
299 KOG0193|consensus 99.9 1.3E-23 2.9E-28 213.0 4.5 162 1-230 487-648 (678)
300 cd05090 PTKc_Ror1 Catalytic do 99.9 3.4E-23 7.4E-28 201.6 7.2 154 3-231 125-279 (283)
301 KOG0668|consensus 99.9 3.5E-23 7.5E-28 187.7 6.6 183 3-238 133-329 (338)
302 cd05058 PTKc_Met_Ron Catalytic 99.9 3.6E-23 7.9E-28 198.7 7.2 155 3-230 99-254 (262)
303 cd05114 PTKc_Tec_Rlk Catalytic 99.9 4.2E-23 9.1E-28 197.8 7.6 153 2-230 100-253 (256)
304 cd05122 PKc_STE Catalytic doma 99.9 3.5E-23 7.7E-28 196.1 7.0 156 2-233 98-253 (253)
305 cd06641 STKc_MST3 Catalytic do 99.9 2.8E-23 6.2E-28 201.6 6.3 159 2-237 101-259 (277)
306 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 3.9E-23 8.4E-28 198.5 7.1 153 2-230 102-255 (260)
307 PTZ00024 cyclin-dependent prot 99.9 5.3E-23 1.1E-27 205.5 8.4 197 2-239 119-321 (335)
308 cd06623 PKc_MAPKK_plant_like C 99.9 3.7E-23 8.1E-28 198.3 7.0 159 2-236 99-261 (264)
309 KOG1989|consensus 99.9 1.5E-23 3.2E-28 221.5 4.4 171 2-241 144-317 (738)
310 cd06652 STKc_MEKK2 Catalytic d 99.9 4.5E-23 9.8E-28 198.7 7.5 158 3-235 107-265 (265)
311 KOG0586|consensus 99.9 6E-23 1.3E-27 209.0 8.7 159 3-240 156-315 (596)
312 cd05036 PTKc_ALK_LTK Catalytic 99.9 2.8E-23 6.2E-28 201.6 5.9 155 2-231 116-274 (277)
313 cd08222 STKc_Nek11 Catalytic d 99.9 4.8E-23 1E-27 197.8 7.3 155 2-234 106-260 (260)
314 cd08226 PK_STRAD_beta Pseudoki 99.9 5E-23 1.1E-27 205.3 7.6 107 3-144 102-208 (328)
315 KOG1006|consensus 99.9 4.8E-23 1E-27 190.5 6.9 164 7-241 172-337 (361)
316 cd07880 STKc_p38gamma_MAPK12 C 99.9 4.1E-23 8.9E-28 207.3 7.1 182 2-239 118-306 (343)
317 cd06614 STKc_PAK Catalytic dom 99.9 4.8E-23 1E-27 200.8 7.2 160 2-236 116-275 (286)
318 cd05123 STKc_AGC Catalytic dom 99.9 7.2E-23 1.6E-27 194.9 8.3 155 2-234 93-250 (250)
319 cd05088 PTKc_Tie2 Catalytic do 99.9 5.1E-23 1.1E-27 202.9 7.3 151 3-231 125-276 (303)
320 cd06629 STKc_MAPKKK_Bck1_like 99.9 7.4E-23 1.6E-27 197.8 8.2 164 2-234 108-272 (272)
321 cd05072 PTKc_Lyn Catalytic dom 99.9 5.9E-23 1.3E-27 197.3 7.3 153 2-230 103-256 (261)
322 cd05099 PTKc_FGFR4 Catalytic d 99.9 5.9E-23 1.3E-27 203.4 7.5 153 3-230 135-288 (314)
323 cd05064 PTKc_EphR_A10 Catalyti 99.9 4.8E-23 1E-27 199.0 6.6 153 2-230 107-260 (266)
324 cd05113 PTKc_Btk_Bmx Catalytic 99.9 5E-23 1.1E-27 197.7 6.6 154 2-231 100-254 (256)
325 cd05092 PTKc_TrkA Catalytic do 99.9 4.5E-23 9.8E-28 200.7 6.2 154 2-230 122-276 (280)
326 cd05104 PTKc_Kit Catalytic dom 99.9 6.1E-23 1.3E-27 208.7 7.3 154 2-230 214-369 (375)
327 cd05609 STKc_MAST Catalytic do 99.9 7.6E-23 1.6E-27 201.7 7.7 176 2-237 101-279 (305)
328 cd05059 PTKc_Tec_like Catalyti 99.9 5.9E-23 1.3E-27 197.0 6.7 153 2-230 100-253 (256)
329 cd05098 PTKc_FGFR1 Catalytic d 99.9 5E-23 1.1E-27 203.1 6.3 154 2-230 140-294 (307)
330 PLN03224 probable serine/threo 99.9 7.6E-23 1.7E-27 213.3 7.9 173 2-235 309-504 (507)
331 cd05581 STKc_PDK1 Catalytic do 99.9 5.4E-23 1.2E-27 198.9 6.2 175 2-234 102-280 (280)
332 cd05069 PTKc_Yes Catalytic dom 99.9 5.9E-23 1.3E-27 197.4 6.4 153 2-230 102-255 (260)
333 cd05115 PTKc_Zap-70 Catalytic 99.9 7.7E-23 1.7E-27 196.6 7.1 155 2-230 95-250 (257)
334 cd05100 PTKc_FGFR3 Catalytic d 99.9 7.5E-23 1.6E-27 204.5 7.2 154 3-231 135-289 (334)
335 cd05068 PTKc_Frk_like Catalyti 99.9 9.6E-23 2.1E-27 195.9 7.5 153 2-230 103-256 (261)
336 cd05047 PTKc_Tie Catalytic dom 99.9 6.8E-23 1.5E-27 198.2 6.3 151 2-230 112-263 (270)
337 cd05071 PTKc_Src Catalytic dom 99.9 1.1E-22 2.4E-27 196.0 7.7 153 2-230 102-255 (262)
338 cd05051 PTKc_DDR Catalytic dom 99.9 9.1E-23 2E-27 199.6 7.2 159 2-230 130-292 (296)
339 cd08530 STKc_CNK2-like Catalyt 99.9 1.7E-22 3.7E-27 192.8 8.9 154 2-234 103-256 (256)
340 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.1E-22 2.4E-27 195.2 7.5 152 2-230 104-256 (261)
341 cd05045 PTKc_RET Catalytic dom 99.9 7.1E-23 1.5E-27 200.2 6.2 154 2-230 127-281 (290)
342 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 7.5E-23 1.6E-27 199.2 6.3 166 2-230 107-276 (283)
343 cd05084 PTKc_Fes Catalytic dom 99.9 9.6E-23 2.1E-27 194.7 6.9 154 2-230 94-248 (252)
344 KOG1167|consensus 99.9 1.9E-22 4.1E-27 197.3 9.0 213 2-238 132-388 (418)
345 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 1.2E-22 2.5E-27 198.5 7.6 168 3-239 106-274 (287)
346 cd05583 STKc_MSK_N N-terminal 99.9 1.2E-22 2.6E-27 198.2 7.6 165 2-237 105-272 (288)
347 cd05060 PTKc_Syk_like Catalyti 99.9 1.3E-22 2.7E-27 194.6 7.4 155 2-230 95-250 (257)
348 cd05613 STKc_MSK1_N N-terminal 99.9 1.3E-22 2.7E-27 198.3 7.4 166 2-238 105-275 (290)
349 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 8.1E-23 1.7E-27 199.2 5.4 170 2-238 103-273 (284)
350 cd06606 STKc_MAPKKK Catalytic 99.9 1.6E-22 3.5E-27 192.3 7.2 158 2-234 101-260 (260)
351 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 2.3E-22 5E-27 200.8 8.6 176 3-239 109-296 (328)
352 cd05033 PTKc_EphR Catalytic do 99.9 2E-22 4.3E-27 194.3 7.9 155 2-231 106-261 (266)
353 KOG0608|consensus 99.9 7.8E-23 1.7E-27 207.5 5.1 184 3-236 730-933 (1034)
354 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 2.1E-22 4.5E-27 194.3 7.5 148 2-231 105-260 (262)
355 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.8E-22 3.8E-27 194.0 6.9 153 2-230 102-255 (260)
356 KOG0587|consensus 99.9 3.4E-22 7.5E-27 209.8 9.4 165 2-238 123-289 (953)
357 cd05112 PTKc_Itk Catalytic dom 99.9 1.9E-22 4.1E-27 193.0 6.6 153 2-230 100-253 (256)
358 cd06653 STKc_MEKK3_like_1 Cata 99.9 2.8E-22 6.1E-27 193.1 7.8 158 2-234 106-264 (264)
359 cd05083 PTKc_Chk Catalytic dom 99.9 2.6E-22 5.7E-27 192.1 7.5 148 3-230 101-249 (254)
360 cd05056 PTKc_FAK Catalytic dom 99.9 2.9E-22 6.3E-27 193.5 7.2 153 2-230 107-260 (270)
361 cd05050 PTKc_Musk Catalytic do 99.9 2.2E-22 4.9E-27 196.3 6.3 153 3-230 131-284 (288)
362 cd05085 PTKc_Fer Catalytic dom 99.9 3.4E-22 7.3E-27 190.6 7.2 153 2-230 93-246 (250)
363 cd05040 PTKc_Ack_like Catalyti 99.9 4E-22 8.6E-27 190.9 7.6 155 2-230 97-253 (257)
364 smart00219 TyrKc Tyrosine kina 99.9 3.7E-22 8E-27 190.5 7.3 153 2-230 103-256 (258)
365 cd05043 PTK_Ryk Pseudokinase d 99.9 2.6E-22 5.7E-27 194.9 6.4 154 2-230 117-271 (280)
366 cd05041 PTKc_Fes_like Catalyti 99.9 3.1E-22 6.6E-27 191.0 6.7 154 2-230 93-247 (251)
367 cd05110 PTKc_HER4 Catalytic do 99.9 3.1E-22 6.6E-27 197.3 6.8 154 3-231 110-264 (303)
368 cd05039 PTKc_Csk_like Catalyti 99.9 3.7E-22 8E-27 191.1 7.1 149 2-230 102-251 (256)
369 cd05044 PTKc_c-ros Catalytic d 99.9 4.2E-22 9E-27 192.0 7.3 154 2-230 106-265 (269)
370 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 3.1E-22 6.6E-27 194.8 6.3 170 2-230 108-278 (284)
371 cd05074 PTKc_Tyro3 Catalytic d 99.9 3.7E-22 8.1E-27 192.8 6.6 153 3-230 114-267 (273)
372 cd05073 PTKc_Hck Catalytic dom 99.9 6.8E-22 1.5E-26 190.0 8.4 153 2-230 102-255 (260)
373 cd08228 STKc_Nek6 Catalytic do 99.9 3.6E-22 7.9E-27 192.2 6.1 154 3-230 107-260 (267)
374 cd05042 PTKc_Aatyk Catalytic d 99.9 3.8E-22 8.2E-27 192.6 6.2 160 3-230 101-265 (269)
375 cd05097 PTKc_DDR_like Catalyti 99.9 4.4E-22 9.6E-27 195.2 6.5 158 3-230 130-291 (295)
376 cd05103 PTKc_VEGFR2 Catalytic 99.9 4.6E-22 1E-26 199.7 6.7 155 2-231 179-335 (343)
377 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 4.9E-22 1.1E-26 190.2 6.5 148 2-230 101-256 (259)
378 cd05086 PTKc_Aatyk2 Catalytic 99.9 8.3E-22 1.8E-26 190.5 7.7 161 3-230 100-264 (268)
379 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 8.9E-22 1.9E-26 190.9 7.9 169 2-230 109-278 (284)
380 cd08229 STKc_Nek7 Catalytic do 99.9 7.5E-22 1.6E-26 190.1 7.3 153 2-230 106-260 (267)
381 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 7.1E-22 1.5E-26 189.8 7.1 147 3-230 101-255 (258)
382 cd05034 PTKc_Src_like Catalyti 99.9 4.8E-22 1.1E-26 190.7 5.9 153 2-230 103-256 (261)
383 cd05055 PTKc_PDGFR Catalytic d 99.8 4.8E-22 1E-26 195.9 5.9 154 2-230 141-296 (302)
384 smart00750 KIND kinase non-cat 99.8 2.8E-22 6.1E-27 181.3 3.7 152 2-236 17-170 (176)
385 cd05095 PTKc_DDR2 Catalytic do 99.8 8.2E-22 1.8E-26 193.4 7.1 97 3-141 131-227 (296)
386 cd05057 PTKc_EGFR_like Catalyt 99.8 1.1E-21 2.4E-26 190.5 8.0 154 2-230 109-263 (279)
387 cd05063 PTKc_EphR_A2 Catalytic 99.8 8.5E-22 1.8E-26 189.9 6.9 155 2-230 107-262 (268)
388 cd08224 STKc_Nek6_Nek7 Catalyt 99.8 1.1E-21 2.4E-26 188.5 7.1 155 2-230 106-260 (267)
389 PRK12305 thrS threonyl-tRNA sy 99.8 7.9E-21 1.7E-25 203.4 13.3 151 294-452 195-360 (575)
390 cd05105 PTKc_PDGFR_alpha Catal 99.8 1.1E-21 2.5E-26 201.0 6.4 154 2-230 237-392 (400)
391 cd05066 PTKc_EphR_A Catalytic 99.8 1.4E-21 3.1E-26 188.5 6.7 155 2-230 106-261 (267)
392 PRK13184 pknD serine/threonine 99.8 8.8E-22 1.9E-26 215.1 5.8 172 3-231 114-285 (932)
393 cd05065 PTKc_EphR_B Catalytic 99.8 2.1E-21 4.6E-26 187.4 7.7 157 2-230 106-263 (269)
394 cd05046 PTK_CCK4 Pseudokinase 99.8 2E-21 4.3E-26 188.1 7.4 155 2-231 117-272 (275)
395 KOG0576|consensus 99.8 1.6E-21 3.6E-26 199.3 6.5 167 3-239 113-279 (829)
396 cd00670 Gly_His_Pro_Ser_Thr_tR 99.8 8.5E-21 1.8E-25 180.5 10.8 140 313-453 3-159 (235)
397 smart00220 S_TKc Serine/Threon 99.8 2.3E-21 4.9E-26 182.2 6.4 157 2-234 87-244 (244)
398 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.8 3.9E-21 8.5E-26 185.7 8.1 102 3-143 101-207 (269)
399 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.8 3.2E-21 7E-26 187.3 7.2 148 2-231 117-272 (274)
400 PF07714 Pkinase_Tyr: Protein 99.8 8.1E-22 1.8E-26 189.9 2.6 154 2-230 103-257 (259)
401 cd05107 PTKc_PDGFR_beta Cataly 99.8 3E-21 6.4E-26 197.9 6.7 154 2-230 239-394 (401)
402 cd05610 STKc_MASTL Catalytic d 99.8 2.8E-21 6.1E-26 210.2 6.8 50 2-51 104-153 (669)
403 KOG0984|consensus 99.8 3.1E-21 6.8E-26 172.7 5.4 99 4-144 150-250 (282)
404 cd08528 STKc_Nek10 Catalytic d 99.8 3.5E-21 7.7E-26 185.7 5.8 152 2-230 113-265 (269)
405 cd00779 ProRS_core_prok Prolyl 99.8 1.7E-20 3.7E-25 180.3 7.6 151 291-451 17-183 (255)
406 KOG1187|consensus 99.8 1.7E-20 3.7E-25 188.9 7.2 100 1-144 173-276 (361)
407 KOG0194|consensus 99.8 3.8E-20 8.2E-25 188.8 8.4 151 3-230 263-415 (474)
408 cd00771 ThrRS_core Threonyl-tR 99.8 3.4E-19 7.4E-24 175.2 13.9 143 309-452 27-183 (298)
409 KOG1095|consensus 99.8 2.9E-20 6.3E-25 202.4 6.7 155 2-230 802-956 (1025)
410 KOG1026|consensus 99.8 4.2E-20 9.2E-25 194.7 7.7 154 2-229 603-756 (774)
411 KOG1151|consensus 99.8 1.3E-19 2.8E-24 177.8 7.8 174 2-238 568-748 (775)
412 TIGR00418 thrS threonyl-tRNA s 99.8 1E-18 2.2E-23 186.8 14.9 141 309-451 197-353 (563)
413 PRK09194 prolyl-tRNA synthetas 99.8 1.4E-18 3E-23 185.0 13.1 156 289-453 31-201 (565)
414 KOG0590|consensus 99.8 5.7E-19 1.2E-23 188.1 8.0 175 2-240 420-594 (601)
415 KOG4257|consensus 99.8 2.3E-19 4.9E-24 182.3 4.5 151 4-229 493-643 (974)
416 KOG4250|consensus 99.8 2.1E-19 4.6E-24 185.7 3.4 98 3-144 121-222 (732)
417 KOG0200|consensus 99.8 6E-19 1.3E-23 189.6 7.1 154 2-230 418-574 (609)
418 KOG0196|consensus 99.8 9.1E-19 2E-23 182.1 7.1 153 3-230 732-886 (996)
419 KOG0199|consensus 99.7 8.5E-19 1.8E-23 180.2 6.2 163 3-238 213-375 (1039)
420 TIGR00409 proS_fam_II prolyl-t 99.7 1.4E-17 3E-22 176.3 13.3 154 289-452 31-200 (568)
421 PRK12444 threonyl-tRNA synthet 99.7 2E-17 4.4E-22 178.9 14.6 168 273-451 238-425 (639)
422 KOG4278|consensus 99.7 2.1E-18 4.7E-23 175.0 6.3 151 4-229 367-517 (1157)
423 PRK14799 thrS threonyl-tRNA sy 99.7 8.6E-18 1.9E-22 176.2 10.5 181 263-452 122-323 (545)
424 KOG1345|consensus 99.7 6.8E-18 1.5E-22 156.9 7.9 162 4-235 123-291 (378)
425 KOG3653|consensus 99.7 1.7E-18 3.6E-23 171.7 3.2 170 1-227 306-495 (534)
426 KOG2052|consensus 99.7 4.4E-18 9.6E-23 167.6 5.0 170 2-228 308-496 (513)
427 TIGR02367 PylS pyrrolysyl-tRNA 99.7 5.3E-17 1.2E-21 162.3 12.8 127 313-447 240-376 (453)
428 KOG1094|consensus 99.7 1.8E-17 4E-22 167.6 4.5 95 4-140 639-733 (807)
429 PLN00113 leucine-rich repeat r 99.7 3.3E-17 7.2E-22 186.1 6.3 94 2-144 780-876 (968)
430 cd00772 ProRS_core Prolyl-tRNA 99.7 6.4E-16 1.4E-20 149.2 13.9 147 294-448 21-187 (264)
431 KOG0606|consensus 99.7 1.6E-17 3.4E-22 178.2 2.5 178 10-255 151-331 (1205)
432 cd00774 GlyRS-like_core Glycyl 99.7 1.9E-16 4.1E-21 152.2 9.6 135 294-443 21-169 (254)
433 KOG1152|consensus 99.7 4E-17 8.6E-22 165.1 5.1 97 3-144 671-768 (772)
434 cd00180 PKc Catalytic domain o 99.7 6.2E-17 1.3E-21 147.9 5.0 122 2-232 92-215 (215)
435 PF00587 tRNA-synt_2b: tRNA sy 99.7 3.6E-16 7.9E-21 141.7 9.3 139 314-452 1-154 (173)
436 PLN02908 threonyl-tRNA synthet 99.6 9.8E-16 2.1E-20 166.3 14.0 179 264-452 277-473 (686)
437 PRK04172 pheS phenylalanyl-tRN 99.6 6.2E-16 1.3E-20 161.8 11.6 136 308-447 228-409 (489)
438 KOG1025|consensus 99.6 5.1E-16 1.1E-20 162.4 7.1 154 3-230 799-952 (1177)
439 KOG1033|consensus 99.6 6.2E-17 1.3E-21 163.2 0.3 151 2-234 359-515 (516)
440 KOG1024|consensus 99.6 4.3E-16 9.4E-21 151.3 5.1 153 3-230 397-550 (563)
441 KOG0603|consensus 99.6 5.6E-16 1.2E-20 159.2 3.6 146 3-236 98-248 (612)
442 PRK12325 prolyl-tRNA synthetas 99.5 2.4E-14 5.3E-19 148.0 10.4 153 289-448 31-197 (439)
443 PRK09537 pylS pyrolysyl-tRNA s 99.5 6.4E-14 1.4E-18 140.9 10.8 126 314-447 205-340 (417)
444 PTZ00326 phenylalanyl-tRNA syn 99.5 4.1E-13 8.9E-18 137.5 14.8 127 314-443 230-412 (494)
445 smart00221 STYKc Protein kinas 99.5 3.2E-14 7E-19 132.4 4.2 101 2-144 98-198 (225)
446 KOG4158|consensus 99.4 8.9E-14 1.9E-18 135.7 6.5 156 4-226 343-505 (598)
447 COG0515 SPS1 Serine/threonine 99.4 9.9E-14 2.1E-18 134.2 6.1 174 3-238 102-282 (384)
448 cd00768 class_II_aaRS-like_cor 99.4 9.9E-13 2.1E-17 122.3 12.2 132 315-446 2-140 (211)
449 PF14531 Kinase-like: Kinase-l 99.4 4.9E-14 1.1E-18 136.2 -0.2 93 5-141 148-245 (288)
450 KOG1240|consensus 99.4 1.6E-13 3.5E-18 148.0 3.6 160 4-231 122-291 (1431)
451 cd00778 ProRS_core_arch_euk Pr 99.4 5.9E-13 1.3E-17 128.5 7.2 156 279-442 3-182 (261)
452 PRK09188 serine/threonine prot 99.4 6.5E-13 1.4E-17 133.5 5.6 79 5-100 114-193 (365)
453 KOG1164|consensus 99.3 2.8E-12 6E-17 127.9 3.8 95 2-118 122-223 (322)
454 TIGR00408 proS_fam_I prolyl-tR 99.2 9.5E-12 2.1E-16 129.6 7.4 157 278-442 8-188 (472)
455 PRK08661 prolyl-tRNA synthetas 99.2 2.4E-11 5.2E-16 126.9 10.2 132 309-442 41-193 (477)
456 KOG0590|consensus 99.2 1.1E-11 2.4E-16 132.5 3.1 164 3-236 124-291 (601)
457 cd05147 RIO1_euk RIO kinase fa 99.1 3.4E-11 7.4E-16 110.8 5.1 50 2-52 117-167 (190)
458 KOG1163|consensus 99.1 8.7E-11 1.9E-15 108.2 6.9 104 2-142 111-217 (341)
459 cd05145 RIO1_like RIO kinase f 99.1 7.5E-11 1.6E-15 108.5 5.3 50 2-52 117-167 (190)
460 KOG1165|consensus 99.1 1.5E-10 3.3E-15 111.1 6.4 105 2-143 124-233 (449)
461 PRK09350 poxB regulator PoxA; 99.1 2.1E-10 4.5E-15 113.1 6.6 115 311-436 4-124 (306)
462 cd00770 SerRS_core Seryl-tRNA 99.0 1.2E-09 2.5E-14 107.6 10.9 138 309-449 49-203 (297)
463 PRK12274 serine/threonine prot 99.0 3.1E-10 6.7E-15 104.9 5.5 48 5-52 94-142 (218)
464 PRK10359 lipopolysaccharide co 99.0 2E-10 4.3E-15 108.1 4.0 46 6-52 139-184 (232)
465 cd00669 Asp_Lys_Asn_RS_core As 99.0 3.1E-09 6.7E-14 102.8 10.2 99 313-419 2-103 (269)
466 KOG1023|consensus 98.9 8.6E-10 1.9E-14 113.6 4.4 163 5-230 51-219 (484)
467 KOG1166|consensus 98.9 9.1E-10 2E-14 121.0 4.9 99 3-134 795-900 (974)
468 smart00090 RIO RIO-like kinase 98.9 1.9E-09 4E-14 102.8 5.2 49 3-52 149-198 (237)
469 KOG0606|consensus 98.8 4.4E-09 9.6E-14 114.2 7.3 199 4-259 906-1114(1205)
470 PRK01723 3-deoxy-D-manno-octul 98.8 4.3E-09 9.4E-14 100.4 5.5 46 6-51 146-191 (239)
471 cd05144 RIO2_C RIO kinase fami 98.8 4.8E-09 1E-13 97.0 5.7 50 3-52 126-175 (198)
472 PRK10345 hypothetical protein; 98.8 4.5E-09 9.7E-14 98.1 4.6 46 5-50 107-157 (210)
473 cd05119 RIO RIO kinase family, 98.8 5.9E-09 1.3E-13 95.1 5.2 50 2-52 114-164 (187)
474 PRK14879 serine/threonine prot 98.6 3.9E-08 8.4E-13 91.5 5.8 47 4-51 97-143 (211)
475 KOG2137|consensus 98.6 2E-07 4.3E-12 98.0 11.1 201 9-281 106-308 (700)
476 KOG0195|consensus 98.6 3.2E-08 7E-13 92.9 4.3 147 2-229 289-440 (448)
477 TIGR03724 arch_bud32 Kae1-asso 98.6 5.2E-08 1.1E-12 89.8 5.0 45 6-51 94-138 (199)
478 PRK09605 bifunctional UGMP fam 98.6 4.6E-08 9.9E-13 104.4 5.1 47 4-51 430-476 (535)
479 PLN02837 threonine-tRNA ligase 98.6 2.8E-07 6.1E-12 99.3 10.4 143 309-451 244-400 (614)
480 cd00777 AspRS_core Asp tRNA sy 98.5 5.8E-07 1.3E-11 87.5 11.0 99 314-419 3-103 (280)
481 KOG0601|consensus 98.5 1.6E-08 3.5E-13 104.5 0.1 159 3-236 219-384 (524)
482 TIGR00414 serS seryl-tRNA synt 98.5 6.4E-07 1.4E-11 92.1 11.6 138 309-449 170-324 (418)
483 PF01409 tRNA-synt_2d: tRNA sy 98.5 7.7E-07 1.7E-11 84.9 9.5 126 313-442 17-157 (247)
484 PRK04173 glycyl-tRNA synthetas 98.4 1.4E-06 3E-11 90.7 11.9 143 309-451 35-256 (456)
485 cd00496 PheRS_alpha_core Pheny 98.4 5.1E-06 1.1E-10 78.1 13.8 119 315-440 3-132 (218)
486 PRK00488 pheS phenylalanyl-tRN 98.4 3.8E-06 8.3E-11 82.9 13.4 126 314-448 109-245 (339)
487 PRK03991 threonyl-tRNA synthet 98.4 2.2E-06 4.9E-11 91.9 11.9 137 309-448 224-377 (613)
488 TIGR00468 pheS phenylalanyl-tR 98.4 3.6E-06 7.9E-11 82.6 12.1 121 314-442 73-204 (294)
489 cd00776 AsxRS_core Asx tRNA sy 98.4 2.3E-06 5E-11 85.2 10.4 102 310-419 22-124 (322)
490 PRK05431 seryl-tRNA synthetase 98.3 5.4E-06 1.2E-10 85.5 11.9 138 309-450 167-323 (425)
491 KOG1266|consensus 98.3 5.3E-07 1.1E-11 87.1 4.0 159 3-240 177-340 (458)
492 cd05120 APH_ChoK_like Aminogly 98.3 9.3E-07 2E-11 76.3 4.6 49 3-51 87-138 (155)
493 cd05146 RIO3_euk RIO kinase fa 98.2 1.6E-06 3.5E-11 79.8 4.8 49 3-52 125-174 (197)
494 COG0442 ProS Prolyl-tRNA synth 98.2 5.4E-06 1.2E-10 86.0 9.1 117 289-413 31-160 (500)
495 PLN02678 seryl-tRNA synthetase 98.1 1.3E-05 2.7E-10 82.7 10.4 133 312-446 174-325 (448)
496 cd05151 ChoK Choline Kinase (C 98.1 3.1E-06 6.8E-11 75.5 5.2 46 5-51 86-136 (170)
497 KOG0601|consensus 98.1 1.7E-06 3.6E-11 89.7 3.0 50 2-51 366-416 (524)
498 COG0441 ThrS Threonyl-tRNA syn 98.1 9.9E-06 2.1E-10 85.7 8.5 142 309-451 217-372 (589)
499 PF00152 tRNA-synt_2: tRNA syn 98.0 4E-05 8.6E-10 76.9 11.9 104 310-419 20-128 (335)
500 COG4248 Uncharacterized protei 98.0 8.7E-06 1.9E-10 81.4 6.9 103 1-143 116-219 (637)
No 1
>KOG1035|consensus
Probab=100.00 E-value=3.3e-58 Score=491.48 Aligned_cols=365 Identities=37% Similarity=0.566 Sum_probs=285.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhh-cCCCccccccCccCCCCCCCCcc-c
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQK-HAGPLARELTGYILPPIDSTAFY-S 79 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (454)
+++|++|+||++||.|+|++|||||||||.|||++.+++|||+|||+|+..... ...... ........ .
T Consensus 697 d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~---------~~~~~~~~g~ 767 (1351)
T KOG1035|consen 697 DEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQD---------LSFSTNRAGS 767 (1351)
T ss_pred HHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhc---------cCccccccCC
Confidence 478999999999999999999999999999999999999999999999963210 000000 00000011 2
Q ss_pred CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.....|+.+||..|+|||++.......|+.|+ ||||| |+++|||+---....+..
T Consensus 768 ~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~Ki--DmYSL--------------GIVlFEM~yPF~TsMERa--------- 822 (1351)
T KOG1035|consen 768 NDGDLTSQVGTALYVAPELLSDTSSNKYNSKI--DMYSL--------------GIVLFEMLYPFGTSMERA--------- 822 (1351)
T ss_pred CCcccccccceeeeecHHHhcccccccccchh--hhHHH--------------HHHHHHHhccCCchHHHH---------
Confidence 34478889999999999999843334799999 99999 999999543111111111
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
..+..+. .+..+.+.. |. ....+...++| +|||++||++||||.
T Consensus 823 --------~iL~~LR-~g~iP~~~~---f~------~~~~~~e~slI-----~~Ll~hdP~kRPtA~------------- 866 (1351)
T KOG1035|consen 823 --------SILTNLR-KGSIPEPAD---FF------DPEHPEEASLI-----RWLLSHDPSKRPTAT------------- 866 (1351)
T ss_pred --------HHHHhcc-cCCCCCCcc---cc------cccchHHHHHH-----HHHhcCCCccCCCHH-------------
Confidence 0111111 222222211 21 12236677899 999999999999999
Q ss_pred CCCCccCccccccCCCCCCCCcchHHHHHHHHHHhcCCCChhHHHHHHHHhCCCCCCccccccccccCC-----chhhHH
Q psy7309 240 SGLSVLGSEQLLTCDHIPPPLVGETVLQDMVRQTLSNPQSKGYKYLVAACFNQKVSPADDITYDISLSR-----SANFSL 314 (454)
Q Consensus 240 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~f~q~~~~~~d~~yD~~~~~-----~~~~~~ 314 (454)
+||+|+++|| ++.++.....+++.+++.+.+....+.+|.+....+.++.||.+... +-...+
T Consensus 867 ---------eLL~s~llpp---e~~el~~~~~h~~~~~~~k~~~~~~~~~~~q~~~~~~n~~yd~~~~~~~~~~~~~~~l 934 (1351)
T KOG1035|consen 867 ---------ELLNSELLPP---EESELLVFLQHLYIEQLGKAYKNLLQLIFEQEVLEVLNHQYDLDRLSYIQYTEINNEL 934 (1351)
T ss_pred ---------HHhhccCCCc---cchHHHHHHHHHHHHHHHHHHhchhhHHHHHhhhhhhccccccccccccccchhHHHH
Confidence 6777777776 66778888898999999999999999999999999999999997731 233348
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeEeecCc
Q psy7309 315 LESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRYCIDRV 394 (454)
Q Consensus 315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~y~g~v 394 (454)
++++++.+.++|++|||+++.||.+-+...-.....+.+.++|.+|.+|.|++|||.||||++++|. ...+|+|++++|
T Consensus 935 ~~~v~e~~~~ifr~Hga~~l~tpp~~~~~~~~~~~~~~v~~ld~sG~~v~Lp~DLr~pfar~vs~N~-~~~~Kry~i~rV 1013 (1351)
T KOG1035|consen 935 REYVVEEVVKIFRKHGAIELETPPLSLRNACAYFSRKAVELLDHSGDVVELPYDLRLPFARYVSRNS-VLSFKRYCISRV 1013 (1351)
T ss_pred HHHHHHHHHHHHHHhcceeccCCccccccccchhccceeeeecCCCCEEEeeccccchHHHHhhhch-HHHHHHhhhhee
Confidence 9999999999999999999999965544433223468999999999999999999999999999987 899999999999
Q ss_pred cccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh-CCCCCcEEEcCccc
Q psy7309 395 FRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR-FNYGNISFAPHPRV 452 (454)
Q Consensus 395 fR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~-~~~~~~~i~i~~~~ 452 (454)
||... .. +|+|++||+|||||++.+ ..|||++.++.|++.. |--+++.|.+||-.
T Consensus 1014 yr~~~-~~-hP~~~~ec~fDii~~t~s-l~~AE~L~vi~Ei~~~~l~~~n~~i~lnH~~ 1069 (1351)
T KOG1035|consen 1014 YRPAI-HN-HPKECLECDFDIIGPTTS-LTEAELLKVIVEITTEILHEGNCDIHLNHAD 1069 (1351)
T ss_pred ecccc-cC-CCccccceeeeEecCCCC-ccHHHHHHHHHHHHHHHhccCceeEEeChHH
Confidence 99866 44 999999999999999944 9999999999998866 33378999999864
No 2
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.3e-37 Score=308.62 Aligned_cols=153 Identities=18% Similarity=0.292 Sum_probs=143.5
Q ss_pred CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc--------ccccEEEEcCCCCeEe
Q psy7309 293 KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT--------SETTASVMTRGGSIVT 364 (454)
Q Consensus 293 ~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~--------~~~~~~~~d~~G~~~~ 364 (454)
.+.++.|++ |.++..+++|+++++++|++|||.+|.||+||+.++|..+ .++||.|.|++|+.++
T Consensus 6 ~prG~~D~l-------p~d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~Dkggr~la 78 (429)
T COG0124 6 RPRGTRDFL-------PEDMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFKDKGGRSLA 78 (429)
T ss_pred CCCCccccC-------hHHHHHHHHHHHHHHHHHHHcCCEeccCccccchhHhhhccCCcccccccceEEEEeCCCCEEE
Confidence 466788888 7788899999999999999999999999999999999642 2789999999999999
Q ss_pred eCCCCCHHHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCC
Q psy7309 365 LPHDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYG 442 (454)
Q Consensus 365 Lr~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~ 442 (454)
||||+|+|+||+++.|.. ..|+|+||+|+||||++||+||+|||+|||||+||.+ ++.+|||+|+|+.++|++||++
T Consensus 79 LRpe~Tapv~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~-~~~~DAEvi~l~~~~l~~lGi~ 157 (429)
T COG0124 79 LRPELTAPVARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSD-SPDADAEVIALAVEILEALGIG 157 (429)
T ss_pred ecccCcHHHHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCC-CcccCHHHHHHHHHHHHHcCCC
Confidence 999999999999998864 4799999999999999999999999999999999999 8999999999999999999999
Q ss_pred CcEEEcCcccc
Q psy7309 443 NISFAPHPRVL 453 (454)
Q Consensus 443 ~~~i~i~~~~~ 453 (454)
+|+|+|||+++
T Consensus 158 ~~~l~iN~~g~ 168 (429)
T COG0124 158 GFTLEINSRGI 168 (429)
T ss_pred cEEEEEcCccc
Confidence 99999999985
No 3
>PLN02972 Histidyl-tRNA synthetase
Probab=100.00 E-value=5.4e-35 Score=309.76 Aligned_cols=155 Identities=26% Similarity=0.431 Sum_probs=143.8
Q ss_pred CCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEEcCCCCeEeeC
Q psy7309 291 NQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVMTRGGSIVTLP 366 (454)
Q Consensus 291 ~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~d~~G~~~~Lr 366 (454)
-+.+.++.|++ |.++..+++|+++|+++|++|||.+|+||+||++++|..+ .+++|+|.|++|+.++||
T Consensus 327 ~k~PkGtrD~l-------P~e~~~re~I~~~L~~vFk~hGy~eI~TPvfE~~Ell~~k~Ged~k~mY~f~D~gGr~LaLR 399 (763)
T PLN02972 327 PKIPKGTRDFA-------KEQMAIREKAFSIITSVFKRHGATALDTPVFELRETLMGKYGEDSKLIYDLADQGGELCSLR 399 (763)
T ss_pred cCCCCCCccCC-------HHHHHHHHHHHHHHHHHHHHcCCEEccCCcccchHHhhcccCcchhheEEEECCCCCEEEeC
Confidence 37778899998 8888899999999999999999999999999999998543 257999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEE
Q psy7309 367 HDLRIPFARYLAQNGSIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISF 446 (454)
Q Consensus 367 ~d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i 446 (454)
||+|+||||++|+|. ..|+|+||+|+|||++++++||+|||+||||||||...+..+|+|+|.++.++|+.+|+++|+|
T Consensus 400 PDlTvPiAR~vA~n~-~~p~KrYyiG~VFR~e~pqkGR~REF~Q~G~EIIG~~~~~~aDAEVI~La~E~L~~LGi~df~I 478 (763)
T PLN02972 400 YDLTVPFARYVAMNG-ITSFKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYEPMGPDFEIIKVLTELLDELDIGTYEV 478 (763)
T ss_pred CCChHHHHHHHHhCC-CCcceEEEeccEEecCCCCCCCCccceEEeEEEEcCCCcchhhHHHHHHHHHHHHhCCCCceEE
Confidence 999999999999986 6799999999999999999999999999999999985366799999999999999999999999
Q ss_pred EcCcccc
Q psy7309 447 APHPRVL 453 (454)
Q Consensus 447 ~i~~~~~ 453 (454)
+|||+++
T Consensus 479 ~INh~~i 485 (763)
T PLN02972 479 KLNHRKL 485 (763)
T ss_pred EeCCHHH
Confidence 9999985
No 4
>KOG1936|consensus
Probab=100.00 E-value=3.3e-35 Score=284.64 Aligned_cols=153 Identities=27% Similarity=0.481 Sum_probs=142.2
Q ss_pred CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEEcCCCCeEeeCCC
Q psy7309 293 KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVMTRGGSIVTLPHD 368 (454)
Q Consensus 293 ~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~d~~G~~~~Lr~d 368 (454)
.+.+++|+. |.++.+|++|++.+..+|++||++.|+||+||-.+++..+ ++.+|-|.|++|+.++||||
T Consensus 62 tPKGTrD~~-------p~qm~lRe~if~~i~~vFkrhGa~~iDTPVFElkeiL~gKYGEdskLiYdlkDQGGEl~SLRYD 134 (518)
T KOG1936|consen 62 TPKGTRDFS-------PEQMALREKIFSTIKEVFKRHGAETIDTPVFELKEILTGKYGEDSKLIYDLKDQGGELCSLRYD 134 (518)
T ss_pred CCCCCCcCC-------HHHHHHHHHHHHHHHHHHHHcCCeeccccchhHHHHHhhhcccccceeEehhhcCCcEEEeecc
Confidence 445677777 8999999999999999999999999999999999997653 46799999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceeeEeecCccccCCC--CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEE
Q psy7309 369 LRIPFARYLAQNGSIVSMKRYCIDRVFRERRV--LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISF 446 (454)
Q Consensus 369 ~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~--~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i 446 (454)
||+|||||+|+|+ +..+|||+|++|||++.| -+||+|||+||+|||.|.-+.+.+|+|++.++.++|+.||+++|.|
T Consensus 135 LTVPfARylAmNk-i~sikRy~iAkVyRRd~P~mtrGR~REFYQcDFDIAG~~d~M~pdaE~lkiv~e~L~~l~Igd~~i 213 (518)
T KOG1936|consen 135 LTVPFARYLAMNK-ITSIKRYHIAKVYRRDQPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVVEILSRLGIGDYGI 213 (518)
T ss_pred cccHHHHHHHHcc-cccceeeeEEEEEeccCchhhchhhhhhhccCccccccCCCCCchHHHHHHHHHHHhhcCccceEE
Confidence 9999999999996 999999999999999887 6899999999999999966589999999999999999999999999
Q ss_pred EcCcccc
Q psy7309 447 APHPRVL 453 (454)
Q Consensus 447 ~i~~~~~ 453 (454)
++|||++
T Consensus 214 KvNhRki 220 (518)
T KOG1936|consen 214 KVNHRKI 220 (518)
T ss_pred EecHHHH
Confidence 9999986
No 5
>KOG0615|consensus
Probab=100.00 E-value=3.1e-35 Score=285.25 Aligned_cols=164 Identities=28% Similarity=0.400 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC---CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE---DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~---~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
.-+-+++|++.|+.|||++||+||||||+|||+..+ ..+||+|||+|+...
T Consensus 277 ~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g-------------------------- 330 (475)
T KOG0615|consen 277 LGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG-------------------------- 330 (475)
T ss_pred hhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc--------------------------
Confidence 346799999999999999999999999999999877 579999999999763
Q ss_pred CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
....+.+.||||.|.|||++...+...|..++ ||||+ ||++|-+++|.+
T Consensus 331 ~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kV--DiWSl--------------GcvLfvcLsG~p--------------- 379 (475)
T KOG0615|consen 331 EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKV--DIWSL--------------GCVLFVCLSGYP--------------- 379 (475)
T ss_pred cceehhhhcCCccccChhheecCCeecccchh--eeeec--------------cceEEEEeccCC---------------
Confidence 24567889999999999999865555566688 99999 999999988766
Q ss_pred CCCCchhhh-hhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 160 PSTGSNVQK-SLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 160 p~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
||.+..... ..+++.++.....|. .|.. .+.++.+|| .+||..||++|||++|+|+||||+...
T Consensus 380 PFS~~~~~~sl~eQI~~G~y~f~p~-----~w~~-----Iseea~dlI-----~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 380 PFSEEYTDPSLKEQILKGRYAFGPL-----QWDR-----ISEEALDLI-----NWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred CcccccCCccHHHHHhcCcccccCh-----hhhh-----hhHHHHHHH-----HHhhEeCcccCcCHHHHhcChhhhccc
Confidence 444443333 333344333322222 2533 447788898 999999999999999999999999543
No 6
>KOG0661|consensus
Probab=100.00 E-value=6.3e-35 Score=287.54 Aligned_cols=188 Identities=30% Similarity=0.449 Sum_probs=151.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.|+.|++||+.||+|+|.+|+.|||+||||||+..+..+||+|||+|+.+. +.
T Consensus 110 ~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~--------------------------Sk 163 (538)
T KOG0661|consen 110 SDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR--------------------------SK 163 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc--------------------------cC
Confidence 4689999999999999999999999999999999999999999999999763 35
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
...|..+.|.+|+|||++++ .+.|+.++ ||||+ ||+++|++.-+| .+.+++..+...
T Consensus 164 pPYTeYVSTRWYRAPEvLLr--s~~Ys~pv--D~wA~--------------GcI~aEl~sLrPLFPG~sE~Dqi~KIc~V 225 (538)
T KOG0661|consen 164 PPYTEYVSTRWYRAPEVLLR--SGYYSSPV--DMWAV--------------GCIMAELYSLRPLFPGASEIDQIYKICEV 225 (538)
T ss_pred CCcchhhhcccccchHHhhh--ccccCCch--HHHHH--------------HHHHHHHHHhcccCCCCcHHHHHHHHHHH
Confidence 67888999999999999984 57789999 99999 999999777554 678888888877
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
++.|-...+... ..+.......+|...+ ....++.+. .++++.++| .+||.|||.+||||+|+|+||||+.
T Consensus 226 LGtP~~~~~~eg--~~La~~mnf~~P~~~~-~~l~~L~p~-~s~~~~~li-----~~ll~WDP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 226 LGTPDKDSWPEG--YNLASAMNFRFPQVKP-SPLKDLLPN-ASSEAASLI-----ERLLAWDPDKRPTASQALQHPFFQV 296 (538)
T ss_pred hCCCccccchhH--HHHHHHhccCCCcCCC-CChHHhCcc-cCHHHHHHH-----HHHhcCCCccCccHHHHhcCccccc
Confidence 777766554332 1222223344444322 345555555 447888888 9999999999999999999999998
Q ss_pred CCCCCC
Q psy7309 237 GSSSGL 242 (454)
Q Consensus 237 ~~~~~~ 242 (454)
......
T Consensus 297 ~~~~~~ 302 (538)
T KOG0661|consen 297 GRASGS 302 (538)
T ss_pred cccccc
Confidence 877543
No 7
>PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=287.67 Aligned_cols=154 Identities=18% Similarity=0.210 Sum_probs=141.3
Q ss_pred CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcC-CCCeEee
Q psy7309 292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTR-GGSIVTL 365 (454)
Q Consensus 292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~-~G~~~~L 365 (454)
+.+.++.|++ |.++..+++|+++++++|++|||.+|.||+||+++++..+ .+++|+|+|+ +|+.++|
T Consensus 4 ~~p~G~~D~l-------p~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~e~~~~~~g~~~~~~~~~f~d~~~g~~l~L 76 (391)
T PRK12292 4 QLPEGIRDLL-------PEEARKIEEIRRRLLDLFRRWGYEEVITPTLEYLDTLLAGGGAILDLRTFKLVDQLSGRTLGL 76 (391)
T ss_pred CCCCcchhcC-------HHHHHHHHHHHHHHHHHHHHcCCceeeCcchhhHHHHhccCCccchhhhEEEeecCCCCEEEE
Confidence 3456778887 7888899999999999999999999999999999998543 3679999999 9999999
Q ss_pred CCCCCHHHHHHHHHcC--CCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCC
Q psy7309 366 PHDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGN 443 (454)
Q Consensus 366 r~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~ 443 (454)
|||+|+|+||++|++. ...|+|+||+|+|||++++++||+|||+||||||||.+ ++.+|+|+|.++.++|+.+|+++
T Consensus 77 RpD~T~~iaR~~a~~~~~~~~p~r~~y~g~vfR~~~~~~gr~ref~Q~g~EiiG~~-~~~aDaEvi~l~~~~l~~lgl~~ 155 (391)
T PRK12292 77 RPDMTAQIARIAATRLANRPGPLRLCYAGNVFRAQERGLGRSREFLQSGVELIGDA-GLEADAEVILLLLEALKALGLPN 155 (391)
T ss_pred CCCCcHHHHHHHHHhccCCCCCeEEEeeceeeecCCCcCCCccchhccceEEeCCC-CchHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999763 25799999999999999999999999999999999988 99999999999999999999999
Q ss_pred cEEEcCcccc
Q psy7309 444 ISFAPHPRVL 453 (454)
Q Consensus 444 ~~i~i~~~~~ 453 (454)
+.|+|||+++
T Consensus 156 ~~i~i~~~~i 165 (391)
T PRK12292 156 FTLDLGHVGL 165 (391)
T ss_pred eEEEeccHHH
Confidence 9999999974
No 8
>KOG0598|consensus
Probab=100.00 E-value=4.4e-34 Score=275.10 Aligned_cols=173 Identities=32% Similarity=0.432 Sum_probs=146.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.+|+.||.|||++|||||||||+|||+|.+|+++|+|||+|+... ..+
T Consensus 125 ~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~-------------------------~~~ 179 (357)
T KOG0598|consen 125 DRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL-------------------------KDG 179 (357)
T ss_pred hHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc-------------------------cCC
Confidence 3589999999999999999999999999999999999999999999998542 223
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....+.|||+.|||||++. +.+|+..+ |+||| |+++|||++|. +|+
T Consensus 180 ~~t~tfcGT~eYmAPEil~---~~gy~~~v--DWWsL--------------GillYeML~G~---------------pPF 225 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILL---GKGYDKAV--DWWSL--------------GILLYEMLTGK---------------PPF 225 (357)
T ss_pred CccccccCCccccChHHHh---cCCCCccc--chHhH--------------HHHHHHHhhCC---------------CCC
Confidence 3445589999999999999 77999999 99999 99999987764 477
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC----ChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP----SSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp----ta~e~l~hp~f~~~ 237 (454)
.+.+..+...++.+......|... ++++.+++ +++|..||++|. +++++-+||||.
T Consensus 226 ~~~~~~~~~~~I~~~k~~~~p~~l-------------s~~ardll-----~~LL~rdp~~RLg~~~d~~~ik~HpfF~-- 285 (357)
T KOG0598|consen 226 YAEDVKKMYDKILKGKLPLPPGYL-------------SEEARDLL-----KKLLKRDPRQRLGGPGDAEEIKRHPFFK-- 285 (357)
T ss_pred cCccHHHHHHHHhcCcCCCCCccC-------------CHHHHHHH-----HHHhccCHHHhcCCCCChHHhhcCcccc--
Confidence 888888888888766544444432 38889999 999999999996 588999999998
Q ss_pred CCCCCCccCccccccCCCCCCC
Q psy7309 238 SSSGLSVLGSEQLLTCDHIPPP 259 (454)
Q Consensus 238 ~~~~~~~~~~~~ll~~~~~~~~ 259 (454)
.++|++++.....|+.
T Consensus 286 ------~inW~~l~~k~l~PpF 301 (357)
T KOG0598|consen 286 ------GINWEKLLAKKLSPPF 301 (357)
T ss_pred ------cCCHHHHHhcCCCCCe
Confidence 4789999988888864
No 9
>KOG0660|consensus
Probab=100.00 E-value=8e-34 Score=272.35 Aligned_cols=185 Identities=31% Similarity=0.415 Sum_probs=144.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.+++|||.||+|+|+.||+||||||.|+|++.+..+||||||+|+..... +...
T Consensus 126 H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-----------------------~~~~ 182 (359)
T KOG0660|consen 126 HAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-----------------------FEDG 182 (359)
T ss_pred HHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-----------------------Cccc
Confidence 57889999999999999999999999999999999999999999999965321 2345
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhhc
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRRE 157 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~~ 157 (454)
..|..+.|.+|+|||++. ....|+..+ ||||+ |||+.||+++++ ..++++..++...
T Consensus 183 ~mTeYVaTRWYRAPElll--~~~~Yt~ai--DiWSv--------------GCI~AEmL~gkplFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 183 FMTEYVATRWYRAPELLL--NSSEYTKAI--DIWSV--------------GCILAEMLTGKPLFPGKDYVHQLQLILELL 244 (359)
T ss_pred chhcceeeeeecCHHHHh--ccccccchh--hhhhh--------------hHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence 678899999999999987 368899999 99999 999999999887 6677777776666
Q ss_pred CCCCCCchhhhh----hhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 158 NGPSTGSNVQKS----LQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 158 ~~p~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
+.|... ..... ...+.++.+. .| ..+|+.+.+... +.+.+|+ .+||..||.+|+||+|+|+|||
T Consensus 245 GtP~~e-~l~~i~s~~ar~yi~slp~-~p----~~~f~~~fp~a~-p~AidLl-----ekmL~fdP~kRita~eAL~hPY 312 (359)
T KOG0660|consen 245 GTPSEE-DLQKIRSEKARPYIKSLPQ-IP----KQPFSSIFPNAN-PLAIDLL-----EKMLVFDPKKRITAEEALAHPY 312 (359)
T ss_pred CCCCHH-HHHHhccHHHHHHHHhCCC-CC----CCCHHHHcCCCC-HHHHHHH-----HHHhccCccccCCHHHHhcChh
Confidence 666332 21111 1112211111 11 134556655444 8888999 9999999999999999999999
Q ss_pred cccCCCC
Q psy7309 234 SLEGSSS 240 (454)
Q Consensus 234 f~~~~~~ 240 (454)
+.....+
T Consensus 313 l~~~hdp 319 (359)
T KOG0660|consen 313 LAPYHDP 319 (359)
T ss_pred hhhhcCC
Confidence 9976654
No 10
>PLN02530 histidine-tRNA ligase
Probab=100.00 E-value=5.3e-33 Score=289.94 Aligned_cols=154 Identities=21% Similarity=0.325 Sum_probs=143.0
Q ss_pred CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcCCCCeEeeC
Q psy7309 292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTRGGSIVTLP 366 (454)
Q Consensus 292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~~G~~~~Lr 366 (454)
+.+.++.|++ |.++..+++|++.++++|++|||.+|+||+||++++|..+ .+++|+|+|++|+.++||
T Consensus 71 ~~p~G~~D~l-------p~~~~~~~~i~~~~~~~~~~~Gy~~I~tP~lE~~el~~~~~g~~~~~~~y~f~D~~g~~l~LR 143 (487)
T PLN02530 71 NPPKGTRDFP-------PEDMRLRNWLFDHFREVSRLFGFEEVDAPVLESEELYIRKAGEEITDQLYNFEDKGGRRVALR 143 (487)
T ss_pred CCCCCcCcCC-------HHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHhccccCcccccceEEEECCCCCEEecC
Confidence 5677888888 8888899999999999999999999999999999998653 367999999999999999
Q ss_pred CCCCHHHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCC--
Q psy7309 367 HDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYG-- 442 (454)
Q Consensus 367 ~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~-- 442 (454)
||+|+|+||+++++.. ..|+|+||+|+|||++++++||+|||+||||||||.+ +..+|+|+|.++.++|+.+|++
T Consensus 144 pD~T~~iaR~~~~~~~~~~~P~r~~y~g~vfR~e~~q~gr~REf~Q~giEiiG~~-~~~aDaEvi~l~~~~l~~lgl~~~ 222 (487)
T PLN02530 144 PELTPSLARLVLQKGKSLSLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGVP-GVEAEAELLAAIVTFFKRVGITSS 222 (487)
T ss_pred CCCcHHHHHHHHhcccccCCCeEEEEEcCEEcCcCCCCCCccceEEcCeeEeCCC-CcchhHHHHHHHHHHHHHcCCCCC
Confidence 9999999999998643 4799999999999999999999999999999999998 9999999999999999999996
Q ss_pred CcEEEcCcccc
Q psy7309 443 NISFAPHPRVL 453 (454)
Q Consensus 443 ~~~i~i~~~~~ 453 (454)
++.|+||||++
T Consensus 223 ~~~i~i~~~~i 233 (487)
T PLN02530 223 DVGIKVSSRKV 233 (487)
T ss_pred ceEEEEcCHHH
Confidence 79999999964
No 11
>KOG0581|consensus
Probab=100.00 E-value=1.1e-33 Score=272.34 Aligned_cols=163 Identities=29% Similarity=0.416 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 4 AWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+-+++++|+.||.|||+ ++||||||||+|||++.+|+|||||||.++.+.. .
T Consensus 180 L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn---------------------------S 232 (364)
T KOG0581|consen 180 LGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN---------------------------S 232 (364)
T ss_pred HHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh---------------------------h
Confidence 56799999999999995 9999999999999999999999999999997753 1
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+++||..|||||-+. +..|+.++ ||||| |+.+.||+.|+.+.... -..
T Consensus 233 ~a~tfvGT~~YMsPERi~---g~~Ys~~s--DIWSL--------------GLsllE~a~GrfP~~~~----------~~~ 283 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERIS---GESYSVKS--DIWSL--------------GLSLLELAIGRFPYPPP----------NPP 283 (364)
T ss_pred hcccccccccccChhhhc---CCcCCccc--ceecc--------------cHHHHHHhhCCCCCCCc----------CCC
Confidence 456789999999999999 88999999 99999 99999988876421110 011
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
...+.+.+..+..++++.+|+.. | +++..+|+ ..||++||.+|||++|+++|||+.....
T Consensus 284 ~~~~~~Ll~~Iv~~ppP~lP~~~----f--------S~ef~~FV-----~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 284 YLDIFELLCAIVDEPPPRLPEGE----F--------SPEFRSFV-----SCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred CCCHHHHHHHHhcCCCCCCCccc----C--------CHHHHHHH-----HHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 23566777778878888888761 1 27888999 9999999999999999999999986443
No 12
>PRK12420 histidyl-tRNA synthetase; Provisional
Probab=100.00 E-value=5.7e-33 Score=285.97 Aligned_cols=153 Identities=26% Similarity=0.392 Sum_probs=140.4
Q ss_pred CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-------ccccEEEEcCCCCeEe
Q psy7309 292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-------SETTASVMTRGGSIVT 364 (454)
Q Consensus 292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-------~~~~~~~~d~~G~~~~ 364 (454)
+++.++.|++ |.++.++++|+++++++|++|||.+|+||+||+++++..+ .+++|+|+|++|+.++
T Consensus 5 ~~p~G~~d~~-------p~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~~~~~~~~~~~~~~~~~~~~~~D~~g~~l~ 77 (423)
T PRK12420 5 RNVKGTKDYL-------PEEQVLRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLA 77 (423)
T ss_pred CCCCCCCCCC-------HHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHHhcccCCCcccccceEEEecCCCceec
Confidence 4566778887 8888899999999999999999999999999999988642 1569999999999999
Q ss_pred eCCCCCHHHHHHHHHcCC-CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCC
Q psy7309 365 LPHDLRIPFARYLAQNGS-IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGN 443 (454)
Q Consensus 365 Lr~d~T~p~aR~~a~~~~-~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~ 443 (454)
||||+|+|+||++|++.. ..|+|+||+|+|||++++++|++|||+||||||||.+ ++.+|+|+|.+|.++|+.+|+ +
T Consensus 78 LRpD~T~~iaR~va~~~~~~~p~r~~y~g~vfR~~~~~~gr~rE~~Q~g~EiiG~~-~~~adaEvi~la~~~l~~lg~-~ 155 (423)
T PRK12420 78 LRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVE-SVMAEAELMSMAFELFRRLNL-E 155 (423)
T ss_pred ccccccHHHHHHHHhCcCCCCCeeEEEEcceECCCCCCCCccceeEECCeeeECCC-CCcccHHHHHHHHHHHHHCCC-C
Confidence 999999999999998643 4699999999999999999999999999999999988 999999999999999999999 7
Q ss_pred cEEEcCcccc
Q psy7309 444 ISFAPHPRVL 453 (454)
Q Consensus 444 ~~i~i~~~~~ 453 (454)
+.|+|||+++
T Consensus 156 ~~i~l~~~~l 165 (423)
T PRK12420 156 VTIQYNNRKL 165 (423)
T ss_pred EEEEEcCHHH
Confidence 9999999874
No 13
>KOG0575|consensus
Probab=100.00 E-value=1.7e-33 Score=285.43 Aligned_cols=161 Identities=34% Similarity=0.451 Sum_probs=139.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+|+.+++||++||.|||++||||||||..|+|++.+.+|||+|||||+.+. ...
T Consensus 118 pEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le-------------------------~~~ 172 (592)
T KOG0575|consen 118 PEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE-------------------------YDG 172 (592)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeec-------------------------Ccc
Confidence 3799999999999999999999999999999999999999999999999764 234
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....+.||||.|.|||++. ..+++..+ ||||+ ||++|.|+.|+| ||
T Consensus 173 Erk~TlCGTPNYIAPEVl~---k~gHsfEv--DiWSl--------------GcvmYtLL~G~P---------------PF 218 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLN---KSGHSFEV--DIWSL--------------GCVMYTLLVGRP---------------PF 218 (592)
T ss_pred cccceecCCCcccChhHhc---cCCCCCch--hhhhh--------------hhHHHhhhhCCC---------------Cc
Confidence 5677899999999999999 77888899 99999 999999877765 56
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
....+.++..++. ...+.+|... +.++++|| ..||+.||.+|||++++|.|+||..+..+
T Consensus 219 etk~vkety~~Ik-~~~Y~~P~~l-------------s~~A~dLI-----~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p 278 (592)
T KOG0575|consen 219 ETKTVKETYNKIK-LNEYSMPSHL-------------SAEAKDLI-----RKLLRPNPSERPSLDEVLDHPFFKSGFTP 278 (592)
T ss_pred ccchHHHHHHHHH-hcCccccccc-------------CHHHHHHH-----HHHhcCCcccCCCHHHHhcCHhhhCCCcC
Confidence 6666667777776 4456667654 38889999 99999999999999999999999766654
No 14
>CHL00201 syh histidine-tRNA synthetase; Provisional
Probab=100.00 E-value=1.8e-32 Score=282.07 Aligned_cols=154 Identities=13% Similarity=0.131 Sum_probs=141.4
Q ss_pred CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc--------ccccEEEEcCCCCeE
Q psy7309 292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT--------SETTASVMTRGGSIV 363 (454)
Q Consensus 292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~--------~~~~~~~~d~~G~~~ 363 (454)
+++.++.|++ |.++..+++|+++++++|++|||.+|.||+||+++++..+ .++||+|.|.+|+.+
T Consensus 5 ~~p~G~~D~l-------p~~~~~~~~i~~~i~~~~~~~Gy~~I~TP~~E~~e~~~~~~G~~~~~~~~~my~~~d~~g~~l 77 (430)
T CHL00201 5 QAIRGTKDIL-------PDEINYWQFIHDKALTLLSLANYSEIRTPIFENSSLYDRGIGETTDIVNKEMYRFTDRSNRDI 77 (430)
T ss_pred CCCCCCCcCC-------HHHHHHHHHHHHHHHHHHHHcCCeeecCcccchHHHHhcccCCcccccccceEEEEcCCCCEE
Confidence 4567788888 8888899999999999999999999999999999998542 158999999999999
Q ss_pred eeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Q psy7309 364 TLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFN 440 (454)
Q Consensus 364 ~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~ 440 (454)
+||||+|+|+||+++.+.. ..|+|+||+|+|||+++++.||+|||+|||+|+||.. ++.+|+|+|.++.++|+.+|
T Consensus 78 ~LRpd~T~~iaR~~~~~~~~~~~~p~R~~y~g~vfR~e~~q~GR~Ref~Q~g~EiiG~~-~~~aD~Evi~l~~~~l~~lG 156 (430)
T CHL00201 78 TLRPEGTAGIVRAFIENKMDYHSNLQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSI-DARADTEVIHLAMQIFNELQ 156 (430)
T ss_pred EeCCCCcHHHHHHHHHccccccCCCeEEEEEcceecCCCCcCCccceeEEeceEEECCC-ChhhHHHHHHHHHHHHHHcC
Confidence 9999999999999877542 3688999999999999999999999999999999998 99999999999999999999
Q ss_pred CCCcEEEcCcccc
Q psy7309 441 YGNISFAPHPRVL 453 (454)
Q Consensus 441 ~~~~~i~i~~~~~ 453 (454)
+++++|+|||+++
T Consensus 157 l~~~~i~l~~~~~ 169 (430)
T CHL00201 157 VKNLILDINSIGK 169 (430)
T ss_pred CCceEEEECCCCc
Confidence 9999999999875
No 15
>PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=279.80 Aligned_cols=153 Identities=15% Similarity=0.134 Sum_probs=139.9
Q ss_pred CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcC-CCCeEeeC
Q psy7309 293 KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTR-GGSIVTLP 366 (454)
Q Consensus 293 ~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~-~G~~~~Lr 366 (454)
.+.++.|++ |.++..+++|+++++++|++|||.+|.||+||++++|..+ ...+|+|.|+ +|+.++||
T Consensus 9 ~p~G~rD~l-------p~e~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~e~~~~~~g~~~~~~~y~f~D~~~g~~l~LR 81 (392)
T PRK12421 9 LPDGVADVL-------PEEAQKIERLRRRLLDLFASRGYQLVMPPLIEYLESLLTGAGQDLKLQTFKLIDQLSGRLMGVR 81 (392)
T ss_pred CCCcccccC-------HHHHHHHHHHHHHHHHHHHHcCCEEeeCcchhhHHHHhccCCccchhceEEEEcCCCCcEEEEC
Confidence 466788888 7778889999999999999999999999999999998543 2479999999 79999999
Q ss_pred CCCCHHHHHHHHHcCC-CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcE
Q psy7309 367 HDLRIPFARYLAQNGS-IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNIS 445 (454)
Q Consensus 367 ~d~T~p~aR~~a~~~~-~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~ 445 (454)
||+|+|+||+++++.. ..|.|+||+|+|||+++++.|++|||+|+|+|+||.+ ++.+|+|+|.++.++|+++|++++.
T Consensus 82 pD~T~~iaR~~a~~~~~~~p~R~~Y~g~VfR~~~~~~gr~rEf~Q~GvEiiG~~-~~~aDaEvi~l~~e~l~~lgi~~~~ 160 (392)
T PRK12421 82 ADITPQVARIDAHLLNREGVARLCYAGSVLHTLPQGLFGSRTPLQLGAELYGHA-GIEADLEIIRLMLGLLRNAGVPALH 160 (392)
T ss_pred CcCCHHHHHHHHhhcCCCCceEEEEeeeEEEcCCCcCCCcCccceeceEEeCCC-CchhHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999999887622 5799999999999998888899999999999999988 9999999999999999999999999
Q ss_pred EEcCcccc
Q psy7309 446 FAPHPRVL 453 (454)
Q Consensus 446 i~i~~~~~ 453 (454)
|+|||+++
T Consensus 161 l~ig~~~i 168 (392)
T PRK12421 161 LDLGHVGI 168 (392)
T ss_pred EEeCCHHH
Confidence 99999875
No 16
>KOG0592|consensus
Probab=99.98 E-value=4.5e-33 Score=278.34 Aligned_cols=177 Identities=31% Similarity=0.377 Sum_probs=141.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
-++.++.||+.||+|||++|||||||||+|||++.++++||.|||.|+.+........ + +........
T Consensus 175 caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~-~-----------~~~~~~a~s 242 (604)
T KOG0592|consen 175 CARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE-N-----------PVDPNQASS 242 (604)
T ss_pred HHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc-C-----------ccCcccccC
Confidence 4688999999999999999999999999999999999999999999997754322110 0 000001112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...++|||..|.+||++. ....+..+ |+|+| ||++|+|+.|.| ||.
T Consensus 243 ~~~SFVGTAeYVSPElL~---~~~~~~~s--DiWAl--------------GCilyQmlaG~P---------------PFr 288 (604)
T KOG0592|consen 243 RRSSFVGTAEYVSPELLN---DSPAGPSS--DLWAL--------------GCILYQMLAGQP---------------PFR 288 (604)
T ss_pred cccceeeeecccCHHHhc---CCCCCccc--chHHH--------------HHHHHHHhcCCC---------------CCc
Confidence 247799999999999999 66778888 99999 999999977654 777
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSGL 242 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~~ 242 (454)
+.+...+++++. .-.+.||+.++ +.+.+|+ +++|..||++|+|++|+.+||||..
T Consensus 289 a~NeyliFqkI~-~l~y~fp~~fp-------------~~a~dLv-----~KLLv~dp~~Rlt~~qIk~HpFF~~------ 343 (604)
T KOG0592|consen 289 AANEYLIFQKIQ-ALDYEFPEGFP-------------EDARDLI-----KKLLVRDPSDRLTSQQIKAHPFFEG------ 343 (604)
T ss_pred cccHHHHHHHHH-HhcccCCCCCC-------------HHHHHHH-----HHHHccCccccccHHHHhhCccccc------
Confidence 777777777776 45566777743 7788999 9999999999999999999999985
Q ss_pred CccCcccccc
Q psy7309 243 SVLGSEQLLT 252 (454)
Q Consensus 243 ~~~~~~~ll~ 252 (454)
++|+++.+
T Consensus 344 --Vdw~nlw~ 351 (604)
T KOG0592|consen 344 --VDWENLWQ 351 (604)
T ss_pred --CChhhhhh
Confidence 55666544
No 17
>KOG0594|consensus
Probab=99.97 E-value=1.3e-32 Score=264.56 Aligned_cols=184 Identities=28% Similarity=0.421 Sum_probs=143.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.+++||+.||+|||++||+||||||+|||++.+|.+||+|||+|+... -...
T Consensus 121 ~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~-------------------------ip~~ 175 (323)
T KOG0594|consen 121 LIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFS-------------------------IPMR 175 (323)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhc-------------------------CCcc
Confidence 589999999999999999999999999999999999999999999999543 1234
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhhc
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRRE 157 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~~ 157 (454)
..++.++|..|+|||++. +...|+..+ ||||+ |||++||+.+++ ...+++..+++.+
T Consensus 176 ~yt~evvTlWYRaPEvLl--Gs~~Ys~~v--DiWs~--------------GcIfaEm~~~~~LFpG~se~~ql~~If~~l 237 (323)
T KOG0594|consen 176 TYTPEVVTLWYRAPEVLL--GSTSYSTSV--DIWSL--------------GCIFAEMFTRRPLFPGDSEIDQLFRIFRLL 237 (323)
T ss_pred cccccEEEeeccCHHHhc--CCCcCCCCc--chHhH--------------HHHHHHHHhCCCCCCCCcHHHHHHHHHHHc
Confidence 578889999999999998 234799999 99999 999999888665 5678888888877
Q ss_pred CCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 158 NGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 158 ~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
+.|....+ ....+..+. ..++.+.....+....++.. +...+++ .+||+++|++|.||+.+|.||||..
T Consensus 238 GtP~e~~Wp~v~~~~~~k----~~f~~~~~~~~l~~~~~~~~-~~~~dll-----~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 238 GTPNEKDWPGVSSLPDYK----APFPKWPGPKDLSSILPKLD-PDGIELL-----SKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred CCCCccCCCCcccccccc----ccCcCCCCccchHHhccccC-ccHHHHH-----HHHhccCcccCcCHHHHhcChhhcc
Confidence 77755432 222222222 13344332233333333333 6788888 9999999999999999999999997
Q ss_pred CCC
Q psy7309 237 GSS 239 (454)
Q Consensus 237 ~~~ 239 (454)
...
T Consensus 308 ~~~ 310 (323)
T KOG0594|consen 308 LPE 310 (323)
T ss_pred ccc
Confidence 654
No 18
>PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A ....
Probab=99.97 E-value=3.9e-32 Score=269.34 Aligned_cols=144 Identities=26% Similarity=0.406 Sum_probs=130.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcC-CC
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVMTRGGSIVTLPHDLRIPFARYLAQNG-SI 383 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~-~~ 383 (454)
|.++..+++|+++++++|++|||++|.||+||+++++... .+++|+|+|++|++++||||+|+|+||++|++. ..
T Consensus 7 ~~~~~~~~~i~~~l~~~f~~~Gy~~i~~P~le~~~~~~~~~~~~~~~~~~~~D~~G~~l~LR~D~T~~iaR~~a~~~~~~ 86 (311)
T PF13393_consen 7 PEEARKRERIESKLREVFERHGYEEIETPLLEYYELFLDKSGEDSDNMYRFLDRSGRVLALRPDLTVPIARYVARNLNLP 86 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-EE-B--SEEEHHHHHCHSSTTGGCSEEEECTTSSEEEE-SSSHHHHHHHHHHCCGSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEECCeEeecHHhhhccccchhhhEEEEecCCcEeccCCCCcHHHHHHHHHhcCcC
Confidence 7888899999999999999999999999999999987652 368999999999999999999999999999873 37
Q ss_pred CceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHH-hCCCCCcEEEcCcccc
Q psy7309 384 VSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFR-RFNYGNISFAPHPRVL 453 (454)
Q Consensus 384 ~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~-~~~~~~~~i~i~~~~~ 453 (454)
.|.|+||+|+|||++++++|++|||+||||||||.+ +..+|+|+|.++.++|+ .+|++++.|+|||+++
T Consensus 87 ~~~r~~y~g~vfR~~~~~~g~~re~~Q~g~Eiig~~-~~~~daEvi~l~~e~l~~~l~~~~~~i~i~h~~i 156 (311)
T PF13393_consen 87 RPKRYYYIGPVFRYERPGKGRPREFYQCGFEIIGSS-SLEADAEVIKLADEILDRELGLENFTIRINHTGI 156 (311)
T ss_dssp SSEEEEEEEEEEEEETTTTTBESEEEEEEEEEESSS-SHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEHHH
T ss_pred CCceEEEEcceeeccccCCCCCceeEEEEEEEECCC-CHHHHHHHHHHHHHHHHhhcCCCCcEEEEcCchh
Confidence 899999999999999889999999999999999999 99999999999999997 9999999999999875
No 19
>KOG0659|consensus
Probab=99.97 E-value=3.7e-32 Score=250.75 Aligned_cols=181 Identities=29% Similarity=0.333 Sum_probs=140.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.+++.||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+. +..
T Consensus 101 a~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~-------------------------~p~ 155 (318)
T KOG0659|consen 101 ADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFG-------------------------SPN 155 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccC-------------------------CCC
Confidence 3689999999999999999999999999999999999999999999999764 233
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
...+..+-|..|+|||.+. +...|+..+ ||||+ ||++.||+-+.| ..++++..+++.
T Consensus 156 ~~~~~~V~TRWYRAPELLf--Gsr~Yg~~V--DmWav--------------GCI~AELllr~P~fpG~sDidQL~~If~~ 217 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLF--GSRQYGTGV--DMWAV--------------GCIFAELLLRVPFFPGDSDIDQLSKIFRA 217 (318)
T ss_pred cccccceeeeeccChHHhc--cchhcCCcc--hhhhH--------------HHHHHHHHccCCCCCCCchHHHHHHHHHH
Confidence 4455569999999999998 357899999 99999 999999766555 688999999998
Q ss_pred cCCCCCCchh-hhhhh---hhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 157 ENGPSTGSNV-QKSLQ---KFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 157 ~~~p~~~~~~-~~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
++.|....+. ...+. ++...+.+.... +.+. .++++.+|+ .+||.+||.+|+||.|+|+|+
T Consensus 218 LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~---------lf~a-as~d~ldLl-----~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 218 LGTPTPDQWPEMTSLPDYVKIQQFPKPPLNN---------LFPA-ASSDALDLL-----SKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred cCCCCcccCccccccccHHHHhcCCCCcccc---------cccc-ccHHHHHHH-----HhhhccCchhcccHHHHhcch
Confidence 8888765432 11111 122111111111 1112 235556666 999999999999999999999
Q ss_pred ccccCCCC
Q psy7309 233 ISLEGSSS 240 (454)
Q Consensus 233 ~f~~~~~~ 240 (454)
||.....+
T Consensus 283 yf~~~P~p 290 (318)
T KOG0659|consen 283 YFKSLPLP 290 (318)
T ss_pred hhhcCCCC
Confidence 99975543
No 20
>TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit. Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit.
Probab=99.97 E-value=1.3e-31 Score=265.39 Aligned_cols=144 Identities=17% Similarity=0.245 Sum_probs=134.3
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcC--C
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVMTRGGSIVTLPHDLRIPFARYLAQNG--S 382 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~--~ 382 (454)
|.++..+++|+++++++|++|||.+|.||+||+.+++..+ .+++|+|+|++|+.++||||+|+|+||+++++. .
T Consensus 5 p~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~le~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iaR~~~~~~~~~ 84 (314)
T TIGR00443 5 PEEAARKEEIERQLQDVFRSWGYQEIITPTLEYLDTLSAGGGILNEDLFKLFDSLGRVLGLRPDMTTPIARAVSTRLRDR 84 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeeccCcchhhHHHhcccCCcchhceEEEECCCCCEEeecCcCcHHHHHHHHHhcccC
Confidence 7788899999999999999999999999999999998643 367999999999999999999999999988752 2
Q ss_pred CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEEcCcccc
Q psy7309 383 IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFAPHPRVL 453 (454)
Q Consensus 383 ~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~~~ 453 (454)
..|.|+||+|+|||+++++.|++|||+|+||||||.+ +..+|+|+|.++.++|+.+|++++.|+|||+++
T Consensus 85 ~~p~r~~y~g~VfR~~~~~~gr~re~~Q~g~Eiig~~-~~~adaEvi~l~~~~l~~lg~~~~~i~l~~~~i 154 (314)
T TIGR00443 85 PLPLRLCYAGNVFRTNESGAGRSREFTQAGVELIGAG-GPAADAEVIALLIEALKALGLKDFKIELGHVGL 154 (314)
T ss_pred CCCeEEEEeceEeecCCCcCCCcccccccceEEeCCC-CchhHHHHHHHHHHHHHHcCCCCeEEEeCcHHH
Confidence 5799999999999999999999999999999999988 899999999999999999999999999999875
No 21
>KOG0663|consensus
Probab=99.97 E-value=2.8e-32 Score=258.50 Aligned_cols=185 Identities=29% Similarity=0.339 Sum_probs=144.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++++.++.|+|.||+|||++.|+||||||+|+|++..|.+||+|||+|+.+. +..
T Consensus 177 ~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg-------------------------sp~ 231 (419)
T KOG0663|consen 177 GEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYG-------------------------SPL 231 (419)
T ss_pred HHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhc-------------------------CCc
Confidence 5799999999999999999999999999999999999999999999999875 334
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
...|..+-|.+|+|||+++ +...|++.+ ||||+ |||+.|++.+.| ..++++..++..
T Consensus 232 k~~T~lVVTLWYRaPELLL--G~~tyst~i--DMWSv--------------GCI~aE~l~~kPlf~G~sE~dQl~~If~l 293 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLL--GAKTYSTAV--DMWSV--------------GCIFAELLTQKPLFPGKSEIDQLDKIFKL 293 (419)
T ss_pred ccCcceEEEeeecCHHHhc--CCcccCcch--hhhhH--------------HHHHHHHHhcCCCCCCCchHHHHHHHHHH
Confidence 5688899999999999998 356899999 99999 999999877665 678888888888
Q ss_pred cCCCCCCch-hhhhhhhhccCCCCCCC--ccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 157 ENGPSTGSN-VQKSLQKFQKSPPSVYR--EWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 157 ~~~p~~~~~-~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
++.|....+ ....+..+.+......| .....|.+.. .+....+|+ ..+|.+||++|.||+|+|+|+|
T Consensus 294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~-----lse~g~~Ll-----n~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALS-----LSEQGFDLL-----NKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred hCCCccccCCCccccchhhccccCCCCchhhhhhccccc-----cchhHHHHH-----HHHhccCccccccHHHhhcccc
Confidence 888765432 22222222111111111 1111122221 347778888 9999999999999999999999
Q ss_pred cccCCC
Q psy7309 234 SLEGSS 239 (454)
Q Consensus 234 f~~~~~ 239 (454)
|.+.+.
T Consensus 364 F~e~P~ 369 (419)
T KOG0663|consen 364 FRETPL 369 (419)
T ss_pred cccCCC
Confidence 998554
No 22
>KOG0593|consensus
Probab=99.97 E-value=2.5e-32 Score=255.83 Aligned_cols=181 Identities=25% Similarity=0.302 Sum_probs=132.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++++++|++.|+.|+|+++||||||||+|||++.+|.+||||||+|+.+. ..+
T Consensus 101 ~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~-------------------------~pg 155 (396)
T KOG0593|consen 101 ELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLS-------------------------APG 155 (396)
T ss_pred HHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhc-------------------------CCc
Confidence 3588999999999999999999999999999999999999999999999764 235
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
...|..+.|.+|+|||.+. +...|+..+ ||||+ ||++.||++|.| ..+++|..+...
T Consensus 156 d~YTDYVATRWYRaPELLv--GDtqYG~pV--DiWAi--------------GCv~aEl~~G~pL~PG~SDiDQLy~I~kt 217 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLV--GDTQYGKPV--DIWAI--------------GCVFAELLTGEPLWPGRSDIDQLYLIRKT 217 (396)
T ss_pred chhhhhhhhhhccChhhhc--ccCcCCCcc--cchhh--------------hHHHHHHhcCCcCCCCcchHHHHHHHHHH
Confidence 5678899999999999998 358899999 99999 999999988777 567777766654
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCC--ccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYR--EWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
++.-.+. .+.++..-..-....+| +... +.+. ..+.... +.++|++.||..||.+|+|.+|+|.||||
T Consensus 218 LG~L~pr--hq~iF~~N~~F~Gv~lP~~~~~e--pLe~-----k~p~~s~-~~ld~~k~cL~~dP~~R~sc~qll~H~yF 287 (396)
T KOG0593|consen 218 LGNLIPR--HQSIFSSNPFFHGVRLPEPEHPE--PLER-----KYPKISN-VLLDLLKKCLKMDPDDRLSCEQLLHHPYF 287 (396)
T ss_pred HcccCHH--HHHHhccCCceeeeecCCCCCcc--chhh-----hcccchH-HHHHHHHHHhcCCccccccHHHHhcChHH
Confidence 4332211 11111110000111222 2211 1111 1122222 33566699999999999999999999999
Q ss_pred c
Q psy7309 235 L 235 (454)
Q Consensus 235 ~ 235 (454)
.
T Consensus 288 d 288 (396)
T KOG0593|consen 288 D 288 (396)
T ss_pred H
Confidence 4
No 23
>KOG0600|consensus
Probab=99.97 E-value=4e-32 Score=269.54 Aligned_cols=183 Identities=26% Similarity=0.340 Sum_probs=142.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+|+.+++||++||+|||++||+|||||++|||||.+|.+||+|||||+.+.. ...
T Consensus 218 ~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~------------------------~~~ 273 (560)
T KOG0600|consen 218 PQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP------------------------SGS 273 (560)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC------------------------CCC
Confidence 47999999999999999999999999999999999999999999999997643 334
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
...|+.+-|.+|+|||+++ +...|+..+ |+||+ |||+.||+.|+| ..++++..++..
T Consensus 274 ~~~T~rVvTLWYRpPELLL--G~t~Yg~aV--DlWS~--------------GCIl~El~~gkPI~~G~tEveQl~kIfkl 335 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLL--GATSYGTAV--DLWSV--------------GCILAELFLGKPILQGRTEVEQLHKIFKL 335 (560)
T ss_pred cccccceEEeeccChHHhc--CCcccccce--eehhh--------------hHHHHHHHcCCCCcCCccHHHHHHHHHHH
Confidence 5588999999999999998 467899999 99999 999999999887 688889888888
Q ss_pred cCCCCCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
++.|....+....+.-+. ..+...++..+. ... ...++.+.+|+ ..||..||.+|.||.++|+|+||.
T Consensus 336 cGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~-----E~~-~~~~~~~l~Ll-----~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 336 CGSPTEDYWPVSKLPHATIFKPQQPYKRRLR-----ETF-KDFPASALDLL-----EKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred hCCCChhccccccCCcccccCCCCcccchHH-----HHh-ccCCHHHHHHH-----HHHhccCccccccHHHHhcCcccc
Confidence 888866653211111000 011111111110 011 22336677787 999999999999999999999995
Q ss_pred cC
Q psy7309 236 EG 237 (454)
Q Consensus 236 ~~ 237 (454)
+.
T Consensus 405 t~ 406 (560)
T KOG0600|consen 405 TE 406 (560)
T ss_pred cC
Confidence 43
No 24
>KOG0658|consensus
Probab=99.97 E-value=5.4e-32 Score=260.22 Aligned_cols=185 Identities=25% Similarity=0.371 Sum_probs=145.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.|+-+.+||++||+|||+.||+||||||.|+|+|.+ |.+||||||.|+.+. .+
T Consensus 126 ~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~--------------------------~~ 179 (364)
T KOG0658|consen 126 EIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV--------------------------KG 179 (364)
T ss_pred eeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeec--------------------------cC
Confidence 477899999999999999999999999999999976 789999999999763 23
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
....+.+.|..|+|||.+. +...|+.+. ||||. ||+++||+-|+| ...+++..++..
T Consensus 180 epniSYicSRyYRaPELif--ga~~Yt~~I--DiWSa--------------GCV~aELl~g~plFpG~s~~dQL~eIik~ 241 (364)
T KOG0658|consen 180 EPNISYICSRYYRAPELIF--GATEYTTSI--DIWSA--------------GCVMAELLKGQPLFPGDSSVDQLVEIIKV 241 (364)
T ss_pred CCceeEEEeccccCHHHHc--CccccCcee--EEhhh--------------hHHHHHHhcCCcccCCCCHHHHHHHHHHH
Confidence 4456789999999999998 467899999 99999 999999877666 677888888876
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
++.|... .......+. ....+|.... ..|..+......++..+|+ .++|.++|.+|.||.|+|.||||.+
T Consensus 242 lG~Pt~e-~I~~mn~~y---~~~~~p~ik~-~~~~~~~~~~~~~d~~dll-----~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 242 LGTPTRE-DIKSMNPNY---TEFKFPQIKA-HPWHKVFFKRLPPDALDLL-----SKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred hCCCCHH-HHhhcCccc---ccccCccccc-ccceeecccCCCHHHHHHH-----HHHhccChhhcCCHHHHhcchhhHH
Confidence 6666433 111111111 1222333222 3466655566668888999 9999999999999999999999998
Q ss_pred CCCCC
Q psy7309 237 GSSSG 241 (454)
Q Consensus 237 ~~~~~ 241 (454)
-..+.
T Consensus 312 lr~~~ 316 (364)
T KOG0658|consen 312 LRDPN 316 (364)
T ss_pred hhCcC
Confidence 77663
No 25
>PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=99.97 E-value=3.6e-31 Score=266.27 Aligned_cols=137 Identities=14% Similarity=0.201 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceee
Q psy7309 314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKR 388 (454)
Q Consensus 314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~ 388 (454)
..++|.++|+++|++|||.+|+||+||+++++..+ .+++|+|.|++|+.++||||+|+|+||+++.++...|.|+
T Consensus 6 ~~~~i~~~i~~~f~~~Gy~~I~tP~lE~~e~~~~~~g~~~~~~~~~f~D~~G~~l~LRpD~T~piaR~~~~~~~~~p~R~ 85 (373)
T PRK12295 6 ASAAAAEALLASFEAAGAVRVDPPILQPAEPFLDLSGEDIRRRIFVTSDENGEELCLRPDFTIPVCRRHIATAGGEPARY 85 (373)
T ss_pred hHHHHHHHHHHHHHHcCCEEeeCCccccHHHhhhccCchhhcceEEEECCCCCEEeeCCCCcHHHHHHHHHcCCCCCeEE
Confidence 46789999999999999999999999999998643 2469999999999999999999999999887533789999
Q ss_pred EeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEEcCcccc
Q psy7309 389 YCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFAPHPRVL 453 (454)
Q Consensus 389 ~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~~~ 453 (454)
||+|+|||++ +|++|||+|+||||||..+++.+|+|+|.++.++|+.+|++++.|+|||+++
T Consensus 86 ~Y~g~VfR~~---~gr~rEf~Q~GvEiiG~~~~~~aDaEvi~l~~~~L~~lgl~~~~i~ig~~~i 147 (373)
T PRK12295 86 AYLGEVFRQR---RDRASEFLQAGIESFGRADPAAADAEVLALALEALAALGPGDLEVRLGDVGL 147 (373)
T ss_pred EEEccEEECC---CCCCCcceEeeEEeeCCCCCccchHHHHHHHHHHHHHcCCCceEEEeCCHHH
Confidence 9999999987 7899999999999999753678999999999999999999999999999975
No 26
>KOG0033|consensus
Probab=99.97 E-value=7.2e-32 Score=246.05 Aligned_cols=161 Identities=28% Similarity=0.443 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
.+-++++|||+||.|+|.+||||||+||+|+|+.... -+||+|||+|..+.
T Consensus 111 ~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-------------------------- 164 (355)
T KOG0033|consen 111 DASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-------------------------- 164 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC--------------------------
Confidence 3678999999999999999999999999999996543 48999999998663
Q ss_pred CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.+..-.+.+|||.|||||++. ..+|+..+ |||+. |+++|-++.|.+
T Consensus 165 ~g~~~~G~~GtP~fmaPEvvr---kdpy~kpv--DiW~c--------------GViLfiLL~G~~--------------- 210 (355)
T KOG0033|consen 165 DGEAWHGFAGTPGYLSPEVLK---KDPYSKPV--DIWAC--------------GVILYILLVGYP--------------- 210 (355)
T ss_pred CccccccccCCCcccCHHHhh---cCCCCCcc--hhhhh--------------hHHHHHHHhCCC---------------
Confidence 234556789999999999998 78999999 99999 999998776654
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
||.+.......+++. .....+|.. .|++ .++++++|+ ++||..||++|+||.|+|+|||..+..
T Consensus 211 PF~~~~~~rlye~I~-~g~yd~~~~----~w~~-----is~~Ak~Lv-----rrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 211 PFWDEDQHRLYEQIK-AGAYDYPSP----EWDT-----VTPEAKSLI-----RRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred CCCCccHHHHHHHHh-ccccCCCCc----ccCc-----CCHHHHHHH-----HHHhccChhhhccHHHHhCCchhcchH
Confidence 555555555555555 344445442 3554 348888999 999999999999999999999998543
No 27
>KOG0599|consensus
Probab=99.97 E-value=1.5e-31 Score=247.36 Aligned_cols=163 Identities=26% Similarity=0.415 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+.++|++|+++|+.|||..+|+||||||+|||++++.++||+|||+|+.+ ..+.
T Consensus 124 ~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l--------------------------~~Ge 177 (411)
T KOG0599|consen 124 ETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL--------------------------EPGE 177 (411)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc--------------------------CCch
Confidence 67899999999999999999999999999999999999999999999976 3356
Q ss_pred CCcCcccccceeccccccc---cccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 83 SHTGQVGTALYAAPELDSH---GVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~---~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
..+..||||.|+|||.+.. ....+|+..+ |+||+ |+|+|.++.|-|+....-.-.+.
T Consensus 178 kLrelCGTPgYLAPEtikC~m~e~~pGYs~EV--D~Wa~--------------GVImyTLLaGcpPFwHRkQmlML---- 237 (411)
T KOG0599|consen 178 KLRELCGTPGYLAPETIKCSMYENHPGYSKEV--DEWAC--------------GVIMYTLLAGCPPFWHRKQMLML---- 237 (411)
T ss_pred hHHHhcCCCcccChhheeeecccCCCCccchh--hHHHH--------------HHHHHHHHcCCCchhHHHHHHHH----
Confidence 7788999999999999852 2356788889 99999 99999977766643322110110
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
+....+...|... .|.+ .+...++|| .+||+.||.+|.|++|+|.||||...
T Consensus 238 ------------R~ImeGkyqF~sp----eWad-----is~~~KdLI-----srlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 238 ------------RMIMEGKYQFRSP----EWAD-----ISATVKDLI-----SRLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred ------------HHHHhcccccCCc----chhh-----ccccHHHHH-----HHHHeeCchhcccHHHHhcChHHHHH
Confidence 1111344444332 3543 347888999 99999999999999999999999743
No 28
>PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=99.97 E-value=2.1e-30 Score=251.42 Aligned_cols=143 Identities=11% Similarity=0.126 Sum_probs=127.7
Q ss_pred CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccc-cccccEEEEcCCCCeEeeCCCCCH
Q psy7309 293 KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA-TSETTASVMTRGGSIVTLPHDLRI 371 (454)
Q Consensus 293 ~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~-~~~~~~~~~d~~G~~~~Lr~d~T~ 371 (454)
.+.++.|++ |.++..+++|+++++++|++|||.+|.||+||+++++.. ..+++|+|.|++|+.++||||+|+
T Consensus 7 ~p~G~rD~l-------p~e~~~~~~i~~~l~~vf~~~Gy~~I~tP~lE~~e~~~~~~~~~~y~~~D~~g~~l~LRpD~T~ 79 (281)
T PRK12293 7 IPQGSKLYF-------GKSAKLKREIENVASEILYENGFEEIVTPFFSYHQHQSIADEKELIRFSDEKNHQISLRADSTL 79 (281)
T ss_pred CCCcccccC-------cHHHHHHHHHHHHHHHHHHHcCCeEeeccceeehhhhcccchhceEEEECCCCCEEEECCcCCH
Confidence 455677777 788889999999999999999999999999999999854 347899999999999999999999
Q ss_pred HHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEEcC
Q psy7309 372 PFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFAPH 449 (454)
Q Consensus 372 p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~i~ 449 (454)
|+||++|.+.. ..|.|+||+|+|||+++ |||+|+|+|+||.+ ++ +|+|.+|+++|+++|++ +.|+||
T Consensus 80 ~iaR~~a~~~~~~~~p~r~~Y~g~vfR~~~------rEf~Q~GvEliG~~-~~---~Evi~la~~~l~~lgl~-~~i~ig 148 (281)
T PRK12293 80 DVVRIVTKRLGRSTEHKKWFYIQPVFRYPS------NEIYQIGAELIGEE-DL---SEILNIAAEIFEELELE-PILQIS 148 (281)
T ss_pred HHHHHHHHhcccCCCceeEEEeccEEecCC------CcccccCeEeeCCC-CH---HHHHHHHHHHHHHcCCC-CEEEEC
Confidence 99999987532 56999999999999852 89999999999998 54 69999999999999996 589999
Q ss_pred cccc
Q psy7309 450 PRVL 453 (454)
Q Consensus 450 ~~~~ 453 (454)
|+++
T Consensus 149 ~~~i 152 (281)
T PRK12293 149 NIKI 152 (281)
T ss_pred CHHH
Confidence 9985
No 29
>cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain.
Probab=99.97 E-value=4.6e-30 Score=248.10 Aligned_cols=141 Identities=23% Similarity=0.297 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC--CC
Q psy7309 312 FSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS--IV 384 (454)
Q Consensus 312 ~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~--~~ 384 (454)
+.++++|++.++++|++|||.+|.||+||+.+++..+ .+++|+|+|++|+.++||||+|+|+||+++++.. ..
T Consensus 2 ~~~~~~l~~~l~~~f~~~Gy~~v~tP~le~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpd~T~~iaR~~a~~~~~~~~ 81 (261)
T cd00773 2 AALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLALRPDLTAPVARAVAENLLSLPL 81 (261)
T ss_pred hHHHHHHHHHHHHHHHHcCCEEeeccceeeHHHhcccccccccceEEEEECCCCCEEEeCCCCcHHHHHHHHhcCccCCC
Confidence 4578999999999999999999999999999998543 3679999999999999999999999999998753 48
Q ss_pred ceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEEcCcccc
Q psy7309 385 SMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFAPHPRVL 453 (454)
Q Consensus 385 ~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~~~ 453 (454)
|.|+||+|+|||+++++.|++|||+|+|+||+|.+ +..+|+|+|.++.++|+.+|++++.|+|||+++
T Consensus 82 p~k~~y~g~vfR~e~~~~g~~re~~Q~g~Eiig~~-~~~~daE~i~l~~~~l~~lg~~~~~i~l~~~~i 149 (261)
T cd00773 82 PLKLYYIGPVFRYERPQKGRYREFYQVGVEIIGSD-SPLADAEVIALAVEILEALGLKDFQIKINHRGI 149 (261)
T ss_pred CeEEEEEcCEEecCCCCCCCccceEEeceeeeCCC-ChHHHHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 99999999999999888999999999999999997 899999999999999999999999999999975
No 30
>KOG0616|consensus
Probab=99.97 E-value=2.4e-31 Score=248.63 Aligned_cols=167 Identities=30% Similarity=0.373 Sum_probs=143.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||++||+|||+++|++|||||||||+|.+|++||.|||.|+... .
T Consensus 145 ~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~----------------------------~ 196 (355)
T KOG0616|consen 145 HARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS----------------------------G 196 (355)
T ss_pred hHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec----------------------------C
Confidence 578999999999999999999999999999999999999999999998652 2
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+.||||.|+|||+++ ..+|+.++ |.||| |+++|||+.|.+ ||.
T Consensus 197 rT~TlCGTPeYLAPEii~---sk~ynkav--DWWal--------------GVLIYEMlaG~p---------------PF~ 242 (355)
T KOG0616|consen 197 RTWTLCGTPEYLAPEIIQ---SKGYNKAV--DWWAL--------------GVLIYEMLAGYP---------------PFY 242 (355)
T ss_pred cEEEecCCccccChHHhh---cCCCCcch--hHHHH--------------HHHHHHHHcCCC---------------CCc
Confidence 356789999999999999 78999999 99999 999999877654 666
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCC-----CChhhhhcCcccccC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKR-----PSSEQNLCQPISLEG 237 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~R-----pta~e~l~hp~f~~~ 237 (454)
+.+...+..++. .....+|..++ +++++|| +++|+.|-.+| ....++..||||..
T Consensus 243 ~~~~~~iY~KI~-~~~v~fP~~fs-------------~~~kdLl-----~~LL~vD~t~R~gnlknG~~dIk~H~wF~~- 302 (355)
T KOG0616|consen 243 DDNPIQIYEKIL-EGKVKFPSYFS-------------SDAKDLL-----KKLLQVDLTKRFGNLKNGVEDIKNHPWFKG- 302 (355)
T ss_pred CCChHHHHHHHH-hCcccCCcccC-------------HHHHHHH-----HHHHhhhhHhhhcCcCCCccccccCccccc-
Confidence 666666667766 56778888753 8889999 99999999999 35789999999984
Q ss_pred CCCCCCccCccccccCCCCCC
Q psy7309 238 SSSGLSVLGSEQLLTCDHIPP 258 (454)
Q Consensus 238 ~~~~~~~~~~~~ll~~~~~~~ 258 (454)
++|+++++...-+|
T Consensus 303 -------v~W~~i~~r~ie~P 316 (355)
T KOG0616|consen 303 -------VDWEAILQRKIEPP 316 (355)
T ss_pred -------ccHHHHhhccccCC
Confidence 67888887766555
No 31
>KOG0667|consensus
Probab=99.97 E-value=6.1e-31 Score=269.40 Aligned_cols=185 Identities=23% Similarity=0.296 Sum_probs=134.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC--CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 1 MGRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED--HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 1 ~~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
+..++.+++|||.||.+||+.||||+||||||||+...+ .|||+|||+|+...
T Consensus 288 l~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~------------------------- 342 (586)
T KOG0667|consen 288 LPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES------------------------- 342 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC-------------------------
Confidence 357899999999999999999999999999999998765 69999999998642
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHH
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHN 153 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~ 153 (454)
......+.+..|+|||+++ +.+|+.+. ||||| |||++||++|.| ...+++..+
T Consensus 343 ---q~vytYiQSRfYRAPEVIL---GlpY~~~I--DmWSL--------------GCIlAEL~tG~PLfpG~ne~DQl~~I 400 (586)
T KOG0667|consen 343 ---QRVYTYIQSRFYRAPEVIL---GLPYDTAI--DMWSL--------------GCILAELFTGEPLFPGDNEYDQLARI 400 (586)
T ss_pred ---Ccceeeeeccccccchhhc---cCCCCCcc--ceeeh--------------hhhHHhHhcCccccCCCCHHHHHHHH
Confidence 2233789999999999999 89999999 99999 999999998877 677888877
Q ss_pred hhhcCCCCCCch--hhhhhhhhcc-----------------------------CCCCCCCccccccccccccccccccch
Q psy7309 154 IRRENGPSTGSN--VQKSLQKFQK-----------------------------SPPSVYREWRSSFEWSTVRNNIKSNFQ 202 (454)
Q Consensus 154 i~~~~~p~~~~~--~~~~~~~~~~-----------------------------~~~~~~p~~~~~~~~~~~~~~~~~~~~ 202 (454)
+..++.|+...- ..+..+-+.. ......|... -.|.... ...
T Consensus 401 ~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~--~~l~~~~-----~~~ 473 (586)
T KOG0667|consen 401 IEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGS--RSLESGL-----PKA 473 (586)
T ss_pred HHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCC--cccchhc-----ccc
Confidence 776666653210 0000000100 0001111110 1122222 112
Q ss_pred hHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 203 HFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 203 ~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
.+..|++|+++||++||.+|+|+.|+|+|||+.....
T Consensus 474 ~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 474 DDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSL 510 (586)
T ss_pred cHHHHHHHHHHHhccCchhcCCHHHHhcCcccccccc
Confidence 3444456669999999999999999999999995443
No 32
>KOG0578|consensus
Probab=99.97 E-value=7.4e-31 Score=264.31 Aligned_cols=160 Identities=27% Similarity=0.441 Sum_probs=132.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++..+++++|.||+|||.+||||||||.+|||++.+|.+||+|||++.++.. ...
T Consensus 370 qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~-------------------------~~~ 424 (550)
T KOG0578|consen 370 QIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE-------------------------EQS 424 (550)
T ss_pred HHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc-------------------------ccC
Confidence 6788999999999999999999999999999999999999999999987742 233
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+.+|||+|||||++. ...|+.++ ||||| |+++.||..|.| |+.
T Consensus 425 KR~TmVGTPYWMAPEVvt---rk~YG~KV--DIWSL--------------GIMaIEMveGEP---------------PYl 470 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVT---RKPYGPKV--DIWSL--------------GIMAIEMVEGEP---------------PYL 470 (550)
T ss_pred ccccccCCCCccchhhhh---hcccCccc--cchhh--------------hhHHHHHhcCCC---------------Ccc
Confidence 677889999999999999 78999999 99999 999999987766 333
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
..+.-..+..+...+.+.+... ...++..++|+ .+||+.||.+|+||.|+|+||||...
T Consensus 471 nE~PlrAlyLIa~ng~P~lk~~-----------~klS~~~kdFL-----~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 471 NENPLRALYLIATNGTPKLKNP-----------EKLSPELKDFL-----DRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred CCChHHHHHHHhhcCCCCcCCc-----------cccCHHHHHHH-----HHHhhcchhcCCCHHHHhcChhhhhc
Confidence 3333334444444555554433 33458899999 99999999999999999999999643
No 33
>KOG0198|consensus
Probab=99.96 E-value=3.1e-30 Score=251.51 Aligned_cols=165 Identities=30% Similarity=0.426 Sum_probs=123.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
+.|+++.+||++||+|||++|||||||||+|||++. ++.+||+|||+++...... ..
T Consensus 117 ~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~----------------------~~ 174 (313)
T KOG0198|consen 117 PLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG----------------------TK 174 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc----------------------cc
Confidence 468999999999999999999999999999999999 7999999999998653100 12
Q ss_pred CCCCcCcccccceeccccccccccccccc--cCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQ--FTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~--~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
........||+.|||||++.. .+.. .+ ||||+ ||++.||++|.++..+..
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~----g~~~~~~s--DiWSl--------------GCtVvEM~Tg~~PW~~~~-------- 226 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRN----GEVARRES--DIWSL--------------GCTVVEMLTGKPPWSEFF-------- 226 (313)
T ss_pred ccccccccCCccccCchhhcC----CCcCCccc--hhhhc--------------CCEEEeccCCCCcchhhc--------
Confidence 234556899999999999982 2223 55 99999 999999999866443310
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
......+........+.+|.. .++.+.+|| ..|+..||++||||+++|.|||.....
T Consensus 227 -----~~~~~~~~ig~~~~~P~ip~~-------------ls~~a~~Fl-----~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 227 -----EEAEALLLIGREDSLPEIPDS-------------LSDEAKDFL-----RKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred -----chHHHHHHHhccCCCCCCCcc-------------cCHHHHHHH-----HHHhhcCcccCcCHHHHhhChhhhccc
Confidence 001111111111222344444 338888999 999999999999999999999998755
Q ss_pred C
Q psy7309 239 S 239 (454)
Q Consensus 239 ~ 239 (454)
.
T Consensus 284 ~ 284 (313)
T KOG0198|consen 284 I 284 (313)
T ss_pred c
Confidence 4
No 34
>KOG0588|consensus
Probab=99.96 E-value=1.6e-30 Score=265.10 Aligned_cols=161 Identities=29% Similarity=0.384 Sum_probs=140.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++.++|+||++|+.|+|..+|+||||||+|+|++.++++||+|||.|... ..+.
T Consensus 113 eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe--------------------------~~gk 166 (786)
T KOG0588|consen 113 EAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE--------------------------VPGK 166 (786)
T ss_pred HHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc--------------------------cCCc
Confidence 68899999999999999999999999999999999999999999999743 2345
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+.||+|+|.|||++. +.+|+... +||||. |+|+|-|++|+. ||.
T Consensus 167 lLeTSCGSPHYA~PEIV~---G~pYdG~~-sDVWSC--------------GVILfALLtG~L---------------PFd 213 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVS---GRPYDGRP-SDVWSC--------------GVILFALLTGKL---------------PFD 213 (786)
T ss_pred cccccCCCcccCCchhhc---CCCCCCCc-cccchh--------------HHHHHHHHhCCC---------------CCC
Confidence 667789999999999999 77886543 599999 999999888763 888
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSG 241 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~ 241 (454)
+.+.+..+.+++ .+.+.+|... ++++.+|| ++||..||.+|+|.+|+++|||+....+..
T Consensus 214 DdNir~LLlKV~-~G~f~MPs~I-------------s~eaQdLL-----r~ml~VDp~~RiT~~eI~kHP~l~g~~~~~ 273 (786)
T KOG0588|consen 214 DDNIRVLLLKVQ-RGVFEMPSNI-------------SSEAQDLL-----RRMLDVDPSTRITTEEILKHPFLSGYTSLP 273 (786)
T ss_pred CccHHHHHHHHH-cCcccCCCcC-------------CHHHHHHH-----HHHhccCccccccHHHHhhCchhhcCCCCC
Confidence 888888888888 4566677653 38899999 999999999999999999999999877643
No 35
>KOG0583|consensus
Probab=99.96 E-value=1.6e-30 Score=262.21 Aligned_cols=158 Identities=30% Similarity=0.383 Sum_probs=130.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
++++++|+|+++|++|||++||+||||||+|||++.+ +++||+|||++.... ..
T Consensus 120 ~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-------------------------~~ 174 (370)
T KOG0583|consen 120 DEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP-------------------------GE 174 (370)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-------------------------CC
Confidence 3689999999999999999999999999999999999 999999999998542 12
Q ss_pred CCCCcCcccccceecccccccccccc-cc-ccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAM-YN-QFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~-~~-~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
.......+||+.|+|||++. +.. |+ .++ ||||+ |+++|.|+.|+.
T Consensus 175 ~~~l~t~cGsp~Y~aPEvl~---~~~~Y~g~~a--DvWS~--------------GViLy~ml~G~~-------------- 221 (370)
T KOG0583|consen 175 DGLLKTFCGSPAYAAPEVLS---GKGTYSGKAA--DVWSL--------------GVILYVLLCGRL-------------- 221 (370)
T ss_pred CCcccCCCCCcccCCHHHhC---CCCCcCCchh--hhhhh--------------HHHHHHHHhCCC--------------
Confidence 45677789999999999998 444 76 445 99999 888888766543
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
||.+.+......++. .....+|.++. ++++.+|+ .+||..||.+|+|+.+++.||||+.
T Consensus 222 -PF~d~~~~~l~~ki~-~~~~~~p~~~~------------S~~~~~Li-----~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 222 -PFDDSNVPNLYRKIR-KGEFKIPSYLL------------SPEARSLI-----EKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred -CCCCccHHHHHHHHh-cCCccCCCCcC------------CHHHHHHH-----HHHcCCCcccCCCHHHHhhChhhcc
Confidence 555555555555543 56677787741 37888999 9999999999999999999999997
No 36
>TIGR00442 hisS histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff.
Probab=99.96 E-value=1.8e-29 Score=258.47 Aligned_cols=152 Identities=15% Similarity=0.225 Sum_probs=138.4
Q ss_pred CCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc--------ccccEEEEcCCCCeEee
Q psy7309 294 VSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT--------SETTASVMTRGGSIVTL 365 (454)
Q Consensus 294 ~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~--------~~~~~~~~d~~G~~~~L 365 (454)
+.++.|+. |.++..+++|++.++++|++|||.+|.||+||+++++..+ .+++|+|.|++|+.++|
T Consensus 3 p~G~~d~~-------p~~~~~~~~i~~~i~~~f~~~Gy~~i~~P~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~L 75 (397)
T TIGR00442 3 PRGTRDFL-------PEEMIKWQYIEETIREVFELYGFKEIRTPIFEYTELFARKVGEETDIVEKEMYTFKDKGGRSLTL 75 (397)
T ss_pred CCCcCCCC-------HHHHHHHHHHHHHHHHHHHHcCCeEecCcccchHHHhhhccCccccccccceEEEECCCCCEEee
Confidence 44555655 8888899999999999999999999999999999988542 15799999999999999
Q ss_pred CCCCCHHHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCC
Q psy7309 366 PHDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGN 443 (454)
Q Consensus 366 r~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~ 443 (454)
|||+|+|+||++|++.. ..|.|+||+|+|||+++++.|++|||+|+|+||+|.+ +..+|+|+|.++.++|+.+|+++
T Consensus 76 RpD~T~~iaR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~ref~Q~g~eiig~~-~~~~d~E~i~l~~e~l~~lg~~~ 154 (397)
T TIGR00442 76 RPEGTAPVARAVIENKLLLPKPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSD-SPLADAEIIALAAEILKELGIKD 154 (397)
T ss_pred cCCCcHHHHHHHHhcccccCCCeEEEEEcCeecCCCCCCCcccceEEcCeeeeCCC-CHHHHHHHHHHHHHHHHHcCCCc
Confidence 99999999999997642 4699999999999999889999999999999999998 88899999999999999999999
Q ss_pred cEEEcCcccc
Q psy7309 444 ISFAPHPRVL 453 (454)
Q Consensus 444 ~~i~i~~~~~ 453 (454)
+.|+|||+++
T Consensus 155 ~~i~i~~~~i 164 (397)
T TIGR00442 155 FTLEINSLGI 164 (397)
T ss_pred eEEEecCccc
Confidence 9999999986
No 37
>KOG0694|consensus
Probab=99.96 E-value=2.4e-30 Score=265.43 Aligned_cols=172 Identities=28% Similarity=0.422 Sum_probs=146.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.+|+.||+|||++|||+||||.+|||+|..|++||+|||+++... ..+
T Consensus 468 ~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-------------------------~~g 522 (694)
T KOG0694|consen 468 PRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-------------------------GQG 522 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC-------------------------CCC
Confidence 3688999999999999999999999999999999999999999999998532 234
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....++||||.|||||++. +..|+..+ |.||| |+++|||+.|. .||
T Consensus 523 ~~TsTfCGTpey~aPEil~---e~~Yt~aV--DWW~l--------------GVLlyeML~Gq---------------~PF 568 (694)
T KOG0694|consen 523 DRTSTFCGTPEFLAPEVLT---EQSYTRAV--DWWGL--------------GVLLYEMLVGE---------------SPF 568 (694)
T ss_pred CccccccCChhhcChhhhc---cCcccchh--hHHHH--------------HHHHHHHHcCC---------------CCC
Confidence 4667899999999999999 89999999 99999 99999987654 366
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~ 236 (454)
.+.+-.+.+..+. ...+.+|.+++ .++.+++ +++|.+||++|..+ +++.+||||..
T Consensus 569 ~gddEee~FdsI~-~d~~~yP~~ls-------------~ea~~il-----~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 569 PGDDEEEVFDSIV-NDEVRYPRFLS-------------KEAIAIM-----RRLLRKNPEKRLGSGERDAEDIKKHPFFRS 629 (694)
T ss_pred CCCCHHHHHHHHh-cCCCCCCCccc-------------HHHHHHH-----HHHhccCcccccCCCCCCchhhhhCCcccc
Confidence 6666666666665 56677888864 6777888 99999999999975 78999999985
Q ss_pred CCCCCCCccCccccccCCCCCCC
Q psy7309 237 GSSSGLSVLGSEQLLTCDHIPPP 259 (454)
Q Consensus 237 ~~~~~~~~~~~~~ll~~~~~~~~ 259 (454)
++|++|++...-||.
T Consensus 630 --------i~w~~L~~r~i~PPf 644 (694)
T KOG0694|consen 630 --------IDWDDLLNRRIKPPF 644 (694)
T ss_pred --------CCHHHHhhccCCCCC
Confidence 778899988877764
No 38
>KOG0591|consensus
Probab=99.96 E-value=7.7e-31 Score=243.64 Aligned_cols=147 Identities=31% Similarity=0.495 Sum_probs=127.7
Q ss_pred hHHHHHHHHHHHHHHHHH--cC--CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHS--QG--IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~--~g--iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.||+++.|++.||.++|. .+ |+||||||.||+++.+|.|||+|||+++.+.
T Consensus 125 ~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~------------------------- 179 (375)
T KOG0591|consen 125 TVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS------------------------- 179 (375)
T ss_pred HHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc-------------------------
Confidence 589999999999999998 44 9999999999999999999999999999774
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
+......+.+|||+||+||.+. ..+|+.++ ||||+ ||++|||+ .+.
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~---~~~Y~~kS--DiWsl--------------GCllyEMc---------------aL~ 225 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIH---ESGYNFKS--DIWSL--------------GCLLYEMC---------------ALQ 225 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHh---cCCCCcch--hHHHH--------------HHHHHHHH---------------hcC
Confidence 3345667799999999999999 88999999 99999 99999974 355
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS 225 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta 225 (454)
+||.+.+......++.++..+++|... .+..+..+| ..|+..||..||+.
T Consensus 226 ~PF~g~n~~~L~~KI~qgd~~~~p~~~------------YS~~l~~li-----~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 226 SPFYGDNLLSLCKKIEQGDYPPLPDEH------------YSTDLRELI-----NMCIAVDPEQRPDT 275 (375)
T ss_pred CCcccccHHHHHHHHHcCCCCCCcHHH------------hhhHHHHHH-----HHHccCCcccCCCc
Confidence 788888888999999988776666432 236677788 99999999999986
No 39
>COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism]
Probab=99.96 E-value=1.1e-29 Score=251.52 Aligned_cols=153 Identities=16% Similarity=0.202 Sum_probs=139.1
Q ss_pred CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcCCCCeEeeCC
Q psy7309 293 KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTRGGSIVTLPH 367 (454)
Q Consensus 293 ~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~~G~~~~Lr~ 367 (454)
.+.++.|.+ |.+.+.++.|++++.+.|.+|||..|+||+|||+|++... .+++|++.|+.|+.+||||
T Consensus 5 lp~g~rd~L-------p~e~~~~~~i~~~l~~~f~~~Gy~~v~tP~lE~~d~~l~~~g~~l~~~~f~l~d~~g~~l~LRp 77 (390)
T COG3705 5 LPEGIRDVL-------PLEARRKEEIRDQLLALFRAWGYERVETPTLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRP 77 (390)
T ss_pred CCCcchhcc-------hhHHhhHHHHHHHHHHHHHHhCCccccccccchhhhhhhccchhhhhhheEEecCCCCeEEecc
Confidence 344566666 8888899999999999999999999999999999998764 3689999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEE
Q psy7309 368 DLRIPFARYLAQNGSIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFA 447 (454)
Q Consensus 368 d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~ 447 (454)
|+|+|+||.++......|.|++|.|+|||..+...|+..||+|+|||++|.+ +..||+|+|.+|..+|+.+|+.+++|.
T Consensus 78 D~T~pVaR~~~~~~~~~P~Rl~Y~G~Vfr~~~~~~g~~~Ef~QaGiEllG~~-~~~ADaEvi~la~~~L~~~gl~~~~l~ 156 (390)
T COG3705 78 DFTIPVARIHATLLAGTPLRLSYAGKVFRAREGRHGRRAEFLQAGIELLGDD-SAAADAEVIALALAALKALGLADLKLE 156 (390)
T ss_pred cccHHHHHHHHHhcCCCCceeeecchhhhcchhccCcccchhhhhhHHhCCC-cchhhHHHHHHHHHHHHHcCCcCeEEE
Confidence 9999999998876545899999999999987556788889999999999997 999999999999999999999999999
Q ss_pred cCcccc
Q psy7309 448 PHPRVL 453 (454)
Q Consensus 448 i~~~~~ 453 (454)
+||.++
T Consensus 157 LG~~gi 162 (390)
T COG3705 157 LGHAGI 162 (390)
T ss_pred eccHHH
Confidence 999875
No 40
>KOG0671|consensus
Probab=99.96 E-value=2.1e-29 Score=242.90 Aligned_cols=187 Identities=24% Similarity=0.310 Sum_probs=134.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC--------------------CCeEEecccchhhhhhhcCCCc
Q psy7309 1 MGRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE--------------------DHVKIGDFGLATNILQKHAGPL 60 (454)
Q Consensus 1 ~~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~--------------------~~vKL~DFGla~~~~~~~~~~~ 60 (454)
++.|+.+.+|+++++++||+.+++|.||||+|||+... ..|||+|||.|+..
T Consensus 191 i~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~-------- 262 (415)
T KOG0671|consen 191 IDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFD-------- 262 (415)
T ss_pred hHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCccee--------
Confidence 46799999999999999999999999999999998532 25899999999853
Q ss_pred cccccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeec
Q psy7309 61 ARELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY 140 (454)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~ 140 (454)
...+...+.|.+|+|||+++ +-+|++.+ ||||+ |||++|++
T Consensus 263 --------------------~e~hs~iVsTRHYRAPEViL---gLGwS~pC--DvWSi--------------GCIL~Ely 303 (415)
T KOG0671|consen 263 --------------------HEHHSTIVSTRHYRAPEVIL---GLGWSQPC--DVWSI--------------GCILVELY 303 (415)
T ss_pred --------------------ccCcceeeeccccCCchhee---ccCcCCcc--Cceee--------------eeEEEEee
Confidence 23457789999999999999 89999999 99999 99999998
Q ss_pred CCch-----hhHHHHHHHhhhcCCCCCCchhhhh-hhhhccCCCCCCCcccccc----ccccccc-----cccccchhHH
Q psy7309 141 KDRP-----KTLEELKHNIRRENGPSTGSNVQKS-LQKFQKSPPSVYREWRSSF----EWSTVRN-----NIKSNFQHFL 205 (454)
Q Consensus 141 ~~~~-----~~~~~l~~~i~~~~~p~~~~~~~~~-~~~~~~~~~~~~p~~~~~~----~~~~~~~-----~~~~~~~~~l 205 (454)
+|.. ...+.| ..+....+|++..-..+. ..++...+...+|+....- .|+...+ ...+.+...
T Consensus 304 tG~~LFqtHen~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~- 381 (415)
T KOG0671|consen 304 TGETLFQTHENLEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQ- 381 (415)
T ss_pred ccceecccCCcHHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhH-
Confidence 8665 233444 444555567766554444 3443333344444332110 1111000 111222222
Q ss_pred HHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 206 ILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 206 i~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
|++++++||..||.+|+|+.|||.||||...
T Consensus 382 -LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 382 -LFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred -HHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 2366699999999999999999999999854
No 41
>KOG0605|consensus
Probab=99.96 E-value=1.1e-29 Score=254.14 Aligned_cols=194 Identities=26% Similarity=0.283 Sum_probs=141.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccc------cccCccCCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLAR------ELTGYILPPIDST 75 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~------~~~~~~~~~~~~~ 75 (454)
+.++.++.+++.|++-||+.|+|||||||+|+|||..|++||+||||++.+...+...... .......+.....
T Consensus 241 ~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (550)
T KOG0605|consen 241 DWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPK 320 (550)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccc
Confidence 4689999999999999999999999999999999999999999999997654322211000 0000000000000
Q ss_pred -----C-----------cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeee
Q psy7309 76 -----A-----------FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEV 139 (454)
Q Consensus 76 -----~-----------~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el 139 (454)
. .........+.+|||-|||||++. +.+|+..+ |+||| |||+|||
T Consensus 321 ~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll---~kgY~~~c--DwWSL--------------G~ImyEm 381 (550)
T KOG0605|consen 321 FNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL---GKGYGKEC--DWWSL--------------GCIMYEM 381 (550)
T ss_pred cccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh---cCCCCccc--cHHHH--------------HHHHHHH
Confidence 0 000112233579999999999999 78899999 99999 9999998
Q ss_pred cCCchhhHHHHHHHhhhcCCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCC
Q psy7309 140 YKDRPKTLEELKHNIRRENGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHD 218 (454)
Q Consensus 140 ~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~d 218 (454)
+.|- +||.+.+..+++.++.+ .....+|... ..++++.+|| .+||. |
T Consensus 382 LvGy---------------PPF~s~tp~~T~rkI~nwr~~l~fP~~~-----------~~s~eA~DLI-----~rll~-d 429 (550)
T KOG0605|consen 382 LVGY---------------PPFCSETPQETYRKIVNWRETLKFPEEV-----------DLSDEAKDLI-----TRLLC-D 429 (550)
T ss_pred HhCC---------------CCCCCCCHHHHHHHHHHHhhhccCCCcC-----------cccHHHHHHH-----HHHhc-C
Confidence 6654 47888777777776653 2334556552 2348899999 99999 9
Q ss_pred CCCCCC---hhhhhcCcccccCCCCCCCccCccccccCC
Q psy7309 219 PSKRPS---SEQNLCQPISLEGSSSGLSVLGSEQLLTCD 254 (454)
Q Consensus 219 P~~Rpt---a~e~l~hp~f~~~~~~~~~~~~~~~ll~~~ 254 (454)
|.+|.. ++|+.+||||.. ++|+.+.+.+
T Consensus 430 ~~~RLG~~G~~EIK~HPfF~~--------v~W~~l~~~~ 460 (550)
T KOG0605|consen 430 PENRLGSKGAEEIKKHPFFKG--------VDWDHLREMP 460 (550)
T ss_pred HHHhcCcccHHHHhcCCcccc--------CCcchhhcCC
Confidence 999986 899999999985 5677776554
No 42
>KOG0582|consensus
Probab=99.96 E-value=1.5e-29 Score=247.92 Aligned_cols=175 Identities=28% Similarity=0.402 Sum_probs=127.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.|..|++++|.||.|||++|.||||||+.|||++.+|.|||+|||.+..+..... ....
T Consensus 127 ~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~---------------------R~~~ 185 (516)
T KOG0582|consen 127 SIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD---------------------RQVT 185 (516)
T ss_pred HHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCc---------------------eeeE
Confidence 3678999999999999999999999999999999999999999998876543110 1122
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
.....+||+.|||||++.+. ..+|+.|+ ||||+ |++..|+..|.. |+.
T Consensus 186 rf~tfvgtp~wmAPEvl~q~-~~GYdfKa--DIwSf--------------GITA~ELA~G~a---------------Pf~ 233 (516)
T KOG0582|consen 186 RFNTFVGTPCWMAPEVLMQQ-LHGYDFKA--DIWSF--------------GITACELAHGHA---------------PFS 233 (516)
T ss_pred eeccccCcccccChHHhhhc-ccCccchh--hhhhh--------------hHHHHHHhcCCC---------------Ccc
Confidence 22678999999999997644 46799999 99999 999999887765 333
Q ss_pred Cchhhhh-hhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 163 GSNVQKS-LQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 163 ~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
..+..+. +..+. +.++..- .+.++.+ ..+..+...+.++ ..||++||.+||||+++|+|+||+....+
T Consensus 234 k~pPmkvLl~tLq-n~pp~~~--t~~~~~d--~~k~~~ksf~e~i-----~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 234 KYPPMKVLLLTLQ-NDPPTLL--TSGLDKD--EDKKFSKSFREMI-----ALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred cCChHHHHHHHhc-CCCCCcc--cccCChH--HhhhhcHHHHHHH-----HHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 3332222 22232 2222111 1111111 1122235667777 99999999999999999999999988876
No 43
>KOG0665|consensus
Probab=99.96 E-value=4.4e-29 Score=235.79 Aligned_cols=186 Identities=26% Similarity=0.344 Sum_probs=138.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.|+.|+++|++|||+.||+||||||+||++..++.+||+|||+|+.-. ..
T Consensus 118 ~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~--------------------------~~ 171 (369)
T KOG0665|consen 118 ETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED--------------------------TD 171 (369)
T ss_pred HHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC--------------------------cc
Confidence 3578999999999999999999999999999999999999999999998432 22
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
...+..+.|..|+|||++. +..|...+ ||||+ ||++.||..+.. ..+++...++..
T Consensus 172 ~~mtpyVvtRyyrapevil---~~~~ke~v--diwSv--------------Gci~gEli~~~Vlf~g~d~idQ~~ki~~~ 232 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVIL---GMGYKENV--DIWSV--------------GCIMGELILGTVLFPGKDHIDQWNKIIEQ 232 (369)
T ss_pred cccCchhheeeccCchhee---ccCCcccc--hhhhh--------------hhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence 4677889999999999998 66788899 99999 999988766443 456666666665
Q ss_pred cCCCCCCc--hhhhhhh----hhccCCCCCCCccccccccccc--cccccccchhHHHHHHHHhhhcCCCCCCCCChhhh
Q psy7309 157 ENGPSTGS--NVQKSLQ----KFQKSPPSVYREWRSSFEWSTV--RNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN 228 (454)
Q Consensus 157 ~~~p~~~~--~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~ 228 (454)
++.|...- ....... ...+.....+.+.++...|... .+...+..+.+++ .+||..||++|.|++++
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll-----~~MLvi~pe~Risv~da 307 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLL-----SKMLVIDPEKRISVDDA 307 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHH-----HHhhccChhhcccHHHH
Confidence 55554321 1111111 1111122444555444445332 2235557778888 99999999999999999
Q ss_pred hcCcccccC
Q psy7309 229 LCQPISLEG 237 (454)
Q Consensus 229 l~hp~f~~~ 237 (454)
|.|||++-.
T Consensus 308 L~HPY~~vw 316 (369)
T KOG0665|consen 308 LRHPYIKVW 316 (369)
T ss_pred hcCCeeeee
Confidence 999999833
No 44
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed
Probab=99.95 E-value=3.7e-28 Score=249.97 Aligned_cols=151 Identities=15% Similarity=0.218 Sum_probs=137.5
Q ss_pred CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc--------ccccEEEEcCCCCeEe
Q psy7309 293 KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT--------SETTASVMTRGGSIVT 364 (454)
Q Consensus 293 ~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~--------~~~~~~~~d~~G~~~~ 364 (454)
.+.++.|++ |.....+++|++.++++|++|||.+|.||+||+.+++..+ .+++|+|.|++|+.++
T Consensus 6 ~p~G~~d~~-------p~~~~~~~~i~~~i~~~~~~~Gy~ei~tP~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~ 78 (412)
T PRK00037 6 APRGTRDIL-------PEESAKWQYVEDTIREVFERYGFSEIRTPIFEYTELFKRKVGEETDIVEKEMYTFQDKGGRSLT 78 (412)
T ss_pred CCCCCCcCC-------HHHHHHHHHHHHHHHHHHHHcCCeEeeccccchHHHhccccCcccccccceeEEEEcCCCCEEE
Confidence 445566666 7888899999999999999999999999999999998542 3679999999999999
Q ss_pred eCCCCCHHHHHHHHHcCCCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCc
Q psy7309 365 LPHDLRIPFARYLAQNGSIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNI 444 (454)
Q Consensus 365 Lr~d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~ 444 (454)
||||+|+|+||+++++. ..|+|+||+|+|||+++++.||+|||+|+|+||||.+ +..+|+|+|.++.++|+.+|++++
T Consensus 79 LRpd~T~~~ar~~~~~~-~~p~r~~~~g~vfR~e~~~~gr~ref~Q~g~ei~g~~-~~~~d~E~i~~~~~~l~~lg~~~~ 156 (412)
T PRK00037 79 LRPEGTAPVVRAVIEHK-LQPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSD-SPLADAEVIALAADILKALGLKGL 156 (412)
T ss_pred ecCCCcHHHHHHHHhCC-CCCeEEEEEcCccccCCCCCCcccceEEcCeeeeCCC-CcchhHHHHHHHHHHHHHcCCCce
Confidence 99999999999999876 4999999999999999899999999999999999998 788999999999999999999989
Q ss_pred EEEcCccc
Q psy7309 445 SFAPHPRV 452 (454)
Q Consensus 445 ~i~i~~~~ 452 (454)
.|.+|+.+
T Consensus 157 ~~~l~~~~ 164 (412)
T PRK00037 157 KLLINSLG 164 (412)
T ss_pred eeeeccCC
Confidence 99887764
No 45
>KOG0986|consensus
Probab=99.95 E-value=3e-29 Score=245.91 Aligned_cols=179 Identities=31% Similarity=0.420 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+++..++.||++||.+||+.+||.|||||+|||+|+.|+|+|+|+|+|..+. .+
T Consensus 287 ~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~--------------------------~g 340 (591)
T KOG0986|consen 287 QRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP--------------------------EG 340 (591)
T ss_pred HHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC--------------------------CC
Confidence 4789999999999999999999999999999999999999999999999763 35
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
...++.+||..|||||++. +..|+.++ |.||+ ||++|||+.|+.+.-..-.
T Consensus 341 ~~~~~rvGT~GYMAPEvl~---ne~Y~~s~--Dwf~l--------------GCllYemi~G~sPFr~~Ke---------- 391 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQ---NEVYDFSP--DWFSL--------------GCLLYEMIAGHSPFRQRKE---------- 391 (591)
T ss_pred CccccccCcccccCHHHHc---CCcccCCc--cHHHH--------------HhHHHHHHcccCchhhhhh----------
Confidence 5667779999999999999 67799999 99999 9999998876652211100
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~ 236 (454)
..-.+.+.+........+++.+ +++++++. +.+|.+||++|.. ++++.+||||+.
T Consensus 392 --Kvk~eEvdrr~~~~~~ey~~kF-------------S~eakslc-----~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 392 --KVKREEVDRRTLEDPEEYSDKF-------------SEEAKSLC-----EGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred --hhhHHHHHHHHhcchhhccccc-------------CHHHHHHH-----HHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 0011122222225555566553 38899999 9999999999985 779999999996
Q ss_pred CCCCCCCccCccccccCCCCCCC
Q psy7309 237 GSSSGLSVLGSEQLLTCDHIPPP 259 (454)
Q Consensus 237 ~~~~~~~~~~~~~ll~~~~~~~~ 259 (454)
..-+.+.. .++..+++|++
T Consensus 452 lnw~rlea----gml~PPfiPdp 470 (591)
T KOG0986|consen 452 LNWRRLEA----GMLEPPFIPDP 470 (591)
T ss_pred CCHhHHhc----cCCCCCCCCCc
Confidence 33322211 44555556554
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.95 E-value=1.7e-28 Score=244.33 Aligned_cols=158 Identities=25% Similarity=0.314 Sum_probs=122.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ...
T Consensus 95 ~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~-------------------------~~~ 149 (323)
T cd05571 95 DRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-------------------------SDG 149 (323)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccc-------------------------cCC
Confidence 3578899999999999999999999999999999999999999999987431 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+. |+
T Consensus 150 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~elltg~~---------------Pf 195 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLE---DNDYGRAV--DWWGL--------------GVVMYEMMCGRL---------------PF 195 (323)
T ss_pred CcccceecCccccChhhhc---CCCCCccc--cCccc--------------chhhhhhhcCCC---------------CC
Confidence 2234568999999999997 67788888 99999 999999887654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
...+.......+. .....+|... ++.+.++| ++||+.||++|| ++.++++||||..
T Consensus 196 ~~~~~~~~~~~~~-~~~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 196 YNQDHEKLFELIL-MEEIRFPRTL-------------SPEAKSLL-----AGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred CCCCHHHHHHHHH-cCCCCCCCCC-------------CHHHHHHH-----HHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 3333333333332 2233344332 36777888 999999999999 8999999999975
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 257 ~ 257 (323)
T cd05571 257 I 257 (323)
T ss_pred C
Confidence 3
No 47
>KOG0597|consensus
Probab=99.95 E-value=6e-29 Score=249.15 Aligned_cols=160 Identities=25% Similarity=0.383 Sum_probs=130.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.|+.++.|++.||.|||+.+|+|||+||.|||++.+|.+|+||||+|+... ...
T Consensus 100 e~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~-------------------------~~t 154 (808)
T KOG0597|consen 100 EQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS-------------------------TNT 154 (808)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcc-------------------------cCc
Confidence 4689999999999999999999999999999999999999999999999764 234
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
...++..|||.|||||++. +..|+..+ |+||+ ||++||++.|+|+...
T Consensus 155 ~vltsikGtPlYmAPElv~---e~pyd~~s--DlWsl--------------GcilYE~~~G~PPF~a------------- 202 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVE---EQPYDHTS--DLWSL--------------GCILYELYVGQPPFYA------------- 202 (808)
T ss_pred eeeeeccCcccccCHHHHc---CCCccchh--hHHHH--------------HHHHHHHhcCCCCchH-------------
Confidence 4567789999999999998 89999999 99999 9999999998874332
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
.......+.+. .++...|... ++....|+ .++|.+||.+|.|+.+++.|||++....
T Consensus 203 --~si~~Lv~~I~-~d~v~~p~~~-------------S~~f~nfl-----~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 203 --RSITQLVKSIL-KDPVKPPSTA-------------SSSFVNFL-----QGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred --HHHHHHHHHHh-cCCCCCcccc-------------cHHHHHHH-----HHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 22222233333 3333334332 36667888 9999999999999999999999886543
No 48
>KOG0579|consensus
Probab=99.95 E-value=1.3e-28 Score=248.95 Aligned_cols=166 Identities=28% Similarity=0.438 Sum_probs=133.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++|+-+++|+|.||+|||+++|||||||..|||++.+|.++|+|||.+.... ...
T Consensus 130 ~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-------------------------~t~ 184 (1187)
T KOG0579|consen 130 DQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-------------------------STR 184 (1187)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch-------------------------hHH
Confidence 3688899999999999999999999999999999999999999999886432 234
Q ss_pred CCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
....+++|||+|||||++... ...+|++++ ||||| |+++.||..+.|
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDyka--DiWSl--------------GITLIEMAqiEP--------------- 233 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKA--DIWSL--------------GITLIEMAQIEP--------------- 233 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhh--hHHhh--------------hhHHHHHhccCC---------------
Confidence 456789999999999998732 467899999 99999 999999866544
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
|-..-+....+-++.++.++.+-.. -.|+ ....+|+ ++||..||..||++.|+|+||||....+
T Consensus 234 PHhelnpMRVllKiaKSePPTLlqP---S~Ws--------~~F~DfL-----k~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 234 PHHELNPMRVLLKIAKSEPPTLLQP---SHWS--------RSFSDFL-----KRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred CccccchHHHHHHHhhcCCCcccCc---chhh--------hHHHHHH-----HHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 3333344555556666666655332 2465 5566888 9999999999999999999999995554
No 49
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.95 E-value=1.3e-28 Score=240.53 Aligned_cols=176 Identities=24% Similarity=0.383 Sum_probs=120.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... .
T Consensus 110 ~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--------------------------~ 163 (290)
T cd07862 110 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--------------------------Q 163 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccC--------------------------C
Confidence 36789999999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......||+.|+|||++. +..++.++ ||||+ ||++|||+++.+. ..+.+..++..
T Consensus 164 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~~f~~~~~~~~~~~i~~~ 224 (290)
T cd07862 164 MALTSVVVTLWYRAPEVLL---QSSYATPV--DLWSV--------------GCIFAEMFRRKPLFRGSSDVDQLGKILDV 224 (290)
T ss_pred cccccccccccccChHHHh---CCCCCCcc--chHHH--------------HHHHHHHHcCCCCcCCCCHHHHHHHHHHH
Confidence 2234567899999999987 56788888 99999 9999998776652 22233333322
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...|..... ..... +. ...+.... ...++.+.+ ..++...+++ .+||+.||++|||+.|+|+||||
T Consensus 225 ~~~~~~~~~-~~~~~-~~---~~~~~~~~-~~~~~~~~~-~~~~~~~~li-----~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 225 IGLPGEEDW-PRDVA-LP---RQAFHSKS-AQPIEKFVT-DIDELGKDLL-----LKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hCCCChhhc-hhhhc-cc---chhccCCC-CCCHHHHcc-CCCHHHHHHH-----HHHhccCchhcCCHHHHhcCCCC
Confidence 222221111 00000 00 00000000 001111111 1235667788 99999999999999999999998
No 50
>KOG0585|consensus
Probab=99.95 E-value=1.3e-28 Score=242.82 Aligned_cols=172 Identities=28% Similarity=0.356 Sum_probs=128.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++|+++++++.||.|||.+|||||||||+|+|++.+|+|||+|||.+........ ....
T Consensus 210 ~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~--------------------~~~d 269 (576)
T KOG0585|consen 210 QQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSD--------------------EGSD 269 (576)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCc--------------------cccH
Confidence 47999999999999999999999999999999999999999999999875532100 0122
Q ss_pred CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.....-+|||.|+|||.+..+....| +.+. ||||+ |+++|-|+-|.. |
T Consensus 270 ~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~--DiWal--------------GVTLYCllfG~~---------------P 318 (576)
T KOG0585|consen 270 DQLSRTVGTPAFFAPELCSGGNSFSYSGFAL--DIWAL--------------GVTLYCLLFGQL---------------P 318 (576)
T ss_pred HHHhhcCCCccccchHhhcCCCCccccchhh--hhhhh--------------hhhHHHhhhccC---------------C
Confidence 23344799999999999984332333 3344 99999 777776433332 4
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
|.+....+...++. ..+..+|... ...+.+++|| ++||++||.+|++..++..|||.......
T Consensus 319 F~~~~~~~l~~KIv-n~pL~fP~~p-----------e~~e~~kDli-----~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~ 381 (576)
T KOG0585|consen 319 FFDDFELELFDKIV-NDPLEFPENP-----------EINEDLKDLI-----KRLLEKDPEQRITLPDIKLHPWVTRDGDS 381 (576)
T ss_pred cccchHHHHHHHHh-cCcccCCCcc-----------cccHHHHHHH-----HHHhhcChhheeehhhheecceeccCCCC
Confidence 44444445555555 5566677663 2347888999 99999999999999999999999877554
Q ss_pred C
Q psy7309 241 G 241 (454)
Q Consensus 241 ~ 241 (454)
.
T Consensus 382 ~ 382 (576)
T KOG0585|consen 382 P 382 (576)
T ss_pred C
Confidence 3
No 51
>KOG0666|consensus
Probab=99.95 E-value=2.1e-28 Score=230.11 Aligned_cols=186 Identities=27% Similarity=0.321 Sum_probs=136.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC----CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE----DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~----~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
-++.|+.||+.|+.|||++-|+||||||.|||+..+ |.|||+|||+|+.+....
T Consensus 133 mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~pl---------------------- 190 (438)
T KOG0666|consen 133 MVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPL---------------------- 190 (438)
T ss_pred HHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccc----------------------
Confidence 478999999999999999999999999999999888 889999999999775311
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC--------------Cch
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK--------------DRP 144 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~--------------~~~ 144 (454)
..-......+-|..|+|||.++ +..+|+..+ ||||. |||+.||++ ..|
T Consensus 191 kpl~s~d~VVVTiWYRAPELLL--Ga~hYT~Ai--DvWAi--------------GCIfaElLtl~PlF~g~E~k~~~~~P 252 (438)
T KOG0666|consen 191 KPLASLDPVVVTIWYRAPELLL--GARHYTKAI--DVWAI--------------GCIFAELLTLEPLFKGREEKIKTKNP 252 (438)
T ss_pred cccccCCceEEEEEecChHHhc--ccccccchh--hhHHH--------------HHHHHHHHccCccccchhhhcccCCC
Confidence 1112345678899999999998 467899999 99999 999999776 234
Q ss_pred hhHHHHHHHhhhcCCCCCCch-h-------hhhhhhhccCCC--CCCCccccccccccccccccccchhHHHHHHHHhhh
Q psy7309 145 KTLEELKHNIRRENGPSTGSN-V-------QKSLQKFQKSPP--SVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWC 214 (454)
Q Consensus 145 ~~~~~l~~~i~~~~~p~~~~~-~-------~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 214 (454)
...+++.+++..++.|....+ . +..+..+..... ..++. |-... +..++.+.+|+ .+|
T Consensus 253 fq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~------~~~~~-k~k~~~a~~LL-----~kl 320 (438)
T KOG0666|consen 253 FQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHK------YYHKH-KVKDPSALDLL-----QKL 320 (438)
T ss_pred chHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHH------HHHHh-cCCCchHHHHH-----HHH
Confidence 667788887776666654422 1 112222221110 01111 11111 22335577888 999
Q ss_pred cCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 215 LNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 215 L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
|++||.+|+||+|+|+|+||.+..-+
T Consensus 321 L~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 321 LTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred hccCchhhccHHHHhcccccccCCCC
Confidence 99999999999999999999986443
No 52
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.95 E-value=2.2e-28 Score=242.21 Aligned_cols=182 Identities=24% Similarity=0.328 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE----ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI----DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl----~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.++.+++||+.||+|||++||+||||||+|||+ +.++.+||+|||+|.......
T Consensus 109 ~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~---------------------- 166 (317)
T cd07868 109 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL---------------------- 166 (317)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCC----------------------
Confidence 578999999999999999999999999999999 455789999999997543110
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh------------
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT------------ 146 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~------------ 146 (454)
.........+||+.|+|||++.. ...|+.++ ||||+ ||++|||++|++..
T Consensus 167 ~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~el~~g~~~f~~~~~~~~~~~~ 228 (317)
T cd07868 167 KPLADLDPVVVTFWYRAPELLLG--ARHYTKAI--DIWAI--------------GCIFAELLTSEPIFHCRQEDIKTSNP 228 (317)
T ss_pred ccccccCCccccccccCCHHHcC--CCCcCchh--hHHHH--------------HHHHHHHHhCCCCccCCccccccccc
Confidence 11122345689999999999871 34578888 99999 99999877765422
Q ss_pred --HHHHHHHhhhcCCCCCCchhhhh---------hhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhc
Q psy7309 147 --LEELKHNIRRENGPSTGSNVQKS---------LQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCL 215 (454)
Q Consensus 147 --~~~l~~~i~~~~~p~~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L 215 (454)
..++...+...+.|... .+... ...+.... ...... ..+-.......++.+.+|| ++||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~dli-----~~mL 298 (317)
T cd07868 229 YHHDQLDRIFNVMGFPADK-DWEDIKKMPEHSTLMKDFRRNT-YTNCSL---IKYMEKHKVKPDSKAFHLL-----QKLL 298 (317)
T ss_pred ccHHHHHHHHHhcCCCChH-HhHHHhhccchhhhhhhhhccc-cCcccc---cchHHhcCCCCChHHHHHH-----HHHh
Confidence 23333333322222211 11110 00000000 000000 0000000011124456677 9999
Q ss_pred CCCCCCCCChhhhhcCccc
Q psy7309 216 NHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 216 ~~dP~~Rpta~e~l~hp~f 234 (454)
++||.+||||+|+|+||||
T Consensus 299 ~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 299 TMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred ccCcccCCCHHHHhcCCCC
Confidence 9999999999999999998
No 53
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=3.1e-28 Score=248.96 Aligned_cols=184 Identities=24% Similarity=0.280 Sum_probs=123.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+.... ...
T Consensus 182 ~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~------------------------~~~ 237 (391)
T PHA03212 182 CDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVD------------------------INA 237 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccc------------------------ccc
Confidence 36789999999999999999999999999999999999999999999874321 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh------------hHHH
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK------------TLEE 149 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~------------~~~~ 149 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++||+++|... ....
T Consensus 238 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~elltg~~p~~~~~~~~~~~~~~~~ 298 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLA---RDPYGPAV--DIWSA--------------GIVLFEMATCHDSLFEKDGLDGDCDSDRQ 298 (391)
T ss_pred cccccccCccCCCChhhhc---CCCCCcHH--HHHHH--------------HHHHHHHHHCCCCcCCcccccccCchhHH
Confidence 2234568999999999998 56788888 99999 9999997766531 1223
Q ss_pred HHHHhhhcCCCCCCch------hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC
Q psy7309 150 LKHNIRRENGPSTGSN------VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP 223 (454)
Q Consensus 150 l~~~i~~~~~p~~~~~------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp 223 (454)
+...+...+.++.... ............. ..+... ..|.... ....++.++| .+||++||.+||
T Consensus 299 l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~--~~~~~l~~Li-----~~mL~~dP~~Rp 368 (391)
T PHA03212 299 IKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSS-RKPGSR--PLWTNLY--ELPIDLEYLI-----CKMLAFDAHHRP 368 (391)
T ss_pred HHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccC-CCCCCC--CCHHHHh--hhhhhHHHHH-----HHHhcCChhhCC
Confidence 3333333333221111 1111111111111 011110 1122211 1124566777 999999999999
Q ss_pred ChhhhhcCcccccCC
Q psy7309 224 SSEQNLCQPISLEGS 238 (454)
Q Consensus 224 ta~e~l~hp~f~~~~ 238 (454)
||+|+|+||||....
T Consensus 369 ta~elL~hp~f~~~~ 383 (391)
T PHA03212 369 SAEALLDFAAFQDIP 383 (391)
T ss_pred CHHHHhcChhhccCC
Confidence 999999999998644
No 54
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.95 E-value=1.7e-28 Score=240.12 Aligned_cols=181 Identities=22% Similarity=0.266 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 103 ~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~-------------------------~~ 157 (288)
T cd07871 103 HNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSV-------------------------PT 157 (288)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccC-------------------------CC
Confidence 35788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......||+.|+|||++.. ...|+.++ ||||+ ||++|++++|++. ..+.+...+..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 219 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLG--STEYSTPI--DMWGV--------------GCILYEMATGRPMFPGSTVKEELHLIFRL 219 (288)
T ss_pred ccccCceecccccChHHhcC--CcccCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 22344578999999999862 35678888 99999 9999998776642 12222222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.+.|.... +..... ...-....+|.... ..|.... ...+++..+|| ++||++||++|||++|+++||||
T Consensus 220 ~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~dll-----~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 220 LGTPTEET-WPGITS-NEEFRSYLFPQYRA-QPLINHA-PRLDTDGIDLL-----SSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hCCCChHH-hhcccc-chhhhccccCccCC-CchHHhC-CCCCHHHHHHH-----HHhcCcCcccCCCHHHHhcCCCC
Confidence 22222211 110000 00000011111100 0111111 12236677888 99999999999999999999998
No 55
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.95 E-value=4.3e-28 Score=236.45 Aligned_cols=183 Identities=25% Similarity=0.353 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..... ...
T Consensus 100 ~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------------------------~~~ 155 (287)
T cd07848 100 EKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE------------------------GSN 155 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc------------------------ccc
Confidence 35788999999999999999999999999999999999999999999985421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
.......||+.|+|||++. +..++.++ |+||+ ||++||+++|+++. .+.+.. +..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~el~~g~~pf~~~~~~~~~~~-~~~ 215 (287)
T cd07848 156 ANYTEYVATRWYRSPELLL---GAPYGKAV--DMWSV--------------GCILGELSDGQPLFPGESEIDQLFT-IQK 215 (287)
T ss_pred ccccccccccccCCcHHHc---CCCCCCch--hHHhH--------------HHHHHHHHhCCCCCCCCCHHHHHHH-HHH
Confidence 1233457899999999997 56688888 99999 99999987766521 122211 222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
..+|.+.......... .......++.......++.......+..+.+|| ++||+.||++|||++|+|+||||
T Consensus 216 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll-----~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 216 VLGPLPAEQMKLFYSN-PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLM-----KNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhCCCCHHHHHhhhcc-chhcccccCcccCcccHHHhhhcccCHHHHHHH-----HHHccCCcccCCCHHHHhcCCCC
Confidence 2222221111100000 000001111110000111111122345677777 99999999999999999999998
No 56
>KOG0201|consensus
Probab=99.95 E-value=9.9e-29 Score=242.02 Aligned_cols=156 Identities=29% Similarity=0.447 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCCC
Q psy7309 5 WRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTSH 84 (454)
Q Consensus 5 ~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (454)
--++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.+.++.. .....
T Consensus 114 ~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~-------------------------~~~rr 168 (467)
T KOG0201|consen 114 AVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN-------------------------TVKRR 168 (467)
T ss_pred eeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec-------------------------hhhcc
Confidence 34789999999999999999999999999999999999999999987642 22334
Q ss_pred cCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCCc
Q psy7309 85 TGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTGS 164 (454)
Q Consensus 85 ~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~~ 164 (454)
.+++|||+|||||++. +..|+.++ ||||| |++.+||..|.| |..+.
T Consensus 169 ~tfvGTPfwMAPEVI~---~~~Y~~KA--DIWSL--------------GITaiEla~GeP---------------P~s~~ 214 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIK---QSGYDTKA--DIWSL--------------GITAIELAKGEP---------------PHSKL 214 (467)
T ss_pred ccccccccccchhhhc---cccccchh--hhhhh--------------hHHHHHHhcCCC---------------CCccc
Confidence 7799999999999999 78999999 99999 999999988766 33333
Q ss_pred hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 165 NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 165 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
.....+..+.+..++.+... | ++.+++|+ ..||++||+.||||.++|+|+|.+..
T Consensus 215 hPmrvlflIpk~~PP~L~~~-----~--------S~~~kEFV-----~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 215 HPMRVLFLIPKSAPPRLDGD-----F--------SPPFKEFV-----EACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred CcceEEEeccCCCCCccccc-----c--------CHHHHHHH-----HHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 33344444444444444432 2 27788999 99999999999999999999999863
No 57
>KOG0669|consensus
Probab=99.95 E-value=4.4e-28 Score=222.15 Aligned_cols=193 Identities=23% Similarity=0.309 Sum_probs=137.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+|+++++++++||.|+|+..|+|||+||+|+|++.+|.+||+|||+|+.+.... +...
T Consensus 124 s~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~---------------------n~~k 182 (376)
T KOG0669|consen 124 SEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSK---------------------NVVK 182 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceeccc---------------------ccCC
Confidence 5799999999999999999999999999999999999999999999998664211 1334
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch----hhHHHHHHHhhhc
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP----KTLEELKHNIRRE 157 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~----~~~~~l~~~i~~~ 157 (454)
...+..+-|..|++||.++ +...|+.+. |||.. ||++.||+++.+ .+..+-...|+.+
T Consensus 183 prytnrvvTLwYrppEllL--G~r~yg~~i--DiWgA--------------gCimaeMwtrspimqgnteqqql~~Is~L 244 (376)
T KOG0669|consen 183 PRYTNRVVTLWYRPPELLL--GDREYGPPI--DIWGA--------------GCIMAEMWTRSPIMQGNTEQQQLHLISQL 244 (376)
T ss_pred CCcccceeeeecCCHHHhh--cccccCCcc--hhHhH--------------HHHHHHHHccCccccCChHHHHHHHHHHH
Confidence 5578889999999999998 467899999 99999 999999998766 2333333444555
Q ss_pred CCCCCCchh--hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 158 NGPSTGSNV--QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 158 ~~p~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
.+......+ ...+.-+..-...++|+......-+.+.+-..++++.+|+ ..||.+||.+|++++|+|+|.||.
T Consensus 245 cGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLl-----e~ll~~DP~kR~~ad~alnh~~F~ 319 (376)
T KOG0669|consen 245 CGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLL-----EKLLKLDPTKRIDADQALNHDFFW 319 (376)
T ss_pred hccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHH-----HHHhccCcccCcchHhhhchhhhh
Confidence 554433322 1222222211111133221100011111122346777888 999999999999999999999998
Q ss_pred cCC
Q psy7309 236 EGS 238 (454)
Q Consensus 236 ~~~ 238 (454)
...
T Consensus 320 kdp 322 (376)
T KOG0669|consen 320 KDP 322 (376)
T ss_pred cCC
Confidence 654
No 58
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.94 E-value=4.4e-28 Score=238.81 Aligned_cols=186 Identities=22% Similarity=0.268 Sum_probs=120.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 103 ~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------------------------~~ 157 (303)
T cd07869 103 ENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV-------------------------PS 157 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC-------------------------CC
Confidence 36889999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh------HHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT------LEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~------~~~l~~~i~ 155 (454)
......+||+.|+|||++.. ...|+.++ ||||+ ||++|+|++|.++. ...+.....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~l~~g~~pf~~~~~~~~~~~~~~~ 219 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLG--STEYSTCL--DMWGV--------------GCIFVEMIQGVAAFPGMKDIQDQLERIFL 219 (303)
T ss_pred ccCCCCcccCCCCChHHHcC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence 22344678999999999861 34577778 99999 99999977765421 122322222
Q ss_pred hcCCCCCCchhh-hhhhhhccCCCC-CCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 156 RENGPSTGSNVQ-KSLQKFQKSPPS-VYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 156 ~~~~p~~~~~~~-~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
....|....... .....+...... ..+.... -.|+. ....+.+.+|+ .+||+.||++|||++|+++|||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~dli-----~~mL~~dp~~R~s~~~~l~h~~ 290 (303)
T cd07869 220 VLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLR-QAWNK---LSYVNHAEDLA-----SKLLQCFPKNRLSAQAALSHEY 290 (303)
T ss_pred HhCCCChhhccchhhccccccccccccCCccHH-HHhhc---cCCChHHHHHH-----HHHhccCchhccCHHHHhcCcc
Confidence 222221111000 000000000000 0000000 00111 11235667888 9999999999999999999999
Q ss_pred cccCCC
Q psy7309 234 SLEGSS 239 (454)
Q Consensus 234 f~~~~~ 239 (454)
|.....
T Consensus 291 f~~~~~ 296 (303)
T cd07869 291 FSDLPP 296 (303)
T ss_pred cccCCh
Confidence 986543
No 59
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.94 E-value=2.8e-28 Score=253.02 Aligned_cols=183 Identities=23% Similarity=0.313 Sum_probs=125.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+.+.. .
T Consensus 171 ~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~--------------------------~ 224 (440)
T PTZ00036 171 LVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLA--------------------------G 224 (440)
T ss_pred HHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccC--------------------------C
Confidence 5788999999999999999999999999999999765 699999999985521 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
......+||+.|+|||++.. ...|+.++ ||||+ ||++|||++|.+. ..+.+...+..
T Consensus 225 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--DiwSl--------------Gvil~elltG~~pf~~~~~~~~~~~i~~~ 286 (440)
T PTZ00036 225 QRSVSYICSRFYRAPELMLG--ATNYTTHI--DLWSL--------------GCIIAEMILGYPIFSGQSSVDQLVRIIQV 286 (440)
T ss_pred CCcccCCCCcCccCHHHhcC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 22334688999999999861 34688888 99999 9999998776652 23344444443
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
.+.|.... ....-..+ ....+|... ...|....+...++++.+|| .+||++||.+|||+.|+|+||||..
T Consensus 287 ~~~p~~~~-~~~~~~~~---~~~~~~~~~-~~~l~~~~p~~~~~~~~~li-----~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 287 LGTPTEDQ-LKEMNPNY---ADIKFPDVK-PKDLKKVFPKGTPDDAINFI-----SQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred hCCCCHHH-HHHhchhh---hcccCCccC-chhHHHHhccCCCHHHHHHH-----HHHCCCChhHCcCHHHHhCChhHHh
Confidence 33332111 10000000 011112110 01122222233446777888 9999999999999999999999986
Q ss_pred CCC
Q psy7309 237 GSS 239 (454)
Q Consensus 237 ~~~ 239 (454)
...
T Consensus 357 ~~~ 359 (440)
T PTZ00036 357 LRD 359 (440)
T ss_pred hhc
Confidence 544
No 60
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.94 E-value=1.2e-27 Score=241.06 Aligned_cols=187 Identities=27% Similarity=0.359 Sum_probs=125.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.... .
T Consensus 119 ~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~--------------------------~ 172 (355)
T cd07874 119 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------------------------S 172 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC--------------------------c
Confidence 35788999999999999999999999999999999999999999999975321 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|+|++++. ...+.+...+..
T Consensus 173 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (355)
T cd07874 173 FMMTPYVVTRYYRAPEVIL---GMGYKENV--DIWSV--------------GCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233 (355)
T ss_pred cccCCccccCCccCHHHHc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 2234468899999999987 66788888 99999 999999776554 223333333333
Q ss_pred cCCCCCCch--hhhhhhhhcc----CCCCCCCccccc--cccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhh
Q psy7309 157 ENGPSTGSN--VQKSLQKFQK----SPPSVYREWRSS--FEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN 228 (454)
Q Consensus 157 ~~~p~~~~~--~~~~~~~~~~----~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~ 228 (454)
.+.|..... .......+.. .....++...+. +++........+..+.+|| .+||+.||++|||++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~mL~~dP~~Rps~~el 308 (355)
T cd07874 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL-----SKMLVIDPAKRISVDEA 308 (355)
T ss_pred hCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHH-----HHHhcCCchhcCCHHHH
Confidence 333322110 1111111110 011111111110 1111111122335567788 99999999999999999
Q ss_pred hcCcccccCC
Q psy7309 229 LCQPISLEGS 238 (454)
Q Consensus 229 l~hp~f~~~~ 238 (454)
|+||||....
T Consensus 309 l~hp~~~~~~ 318 (355)
T cd07874 309 LQHPYINVWY 318 (355)
T ss_pred hcCcchhccc
Confidence 9999998543
No 61
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.94 E-value=3.8e-28 Score=237.26 Aligned_cols=158 Identities=26% Similarity=0.369 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..... .
T Consensus 102 ~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--------------------------~ 155 (285)
T cd05631 102 QRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE--------------------------G 155 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC--------------------------C
Confidence 35788999999999999999999999999999999999999999999875321 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+.+ +
T Consensus 156 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------Gvil~el~~g~~p---------------f 201 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVIN---NEKYTFSP--DWWGL--------------GCLIYEMIQGQSP---------------F 201 (285)
T ss_pred CeecCCCCCCCccCHhhhc---CCCCCccc--CchhH--------------HHHHHHHHhCCCC---------------C
Confidence 1223457999999999998 67888888 99999 9999998776542 2
Q ss_pred CCchh----hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCc
Q psy7309 162 TGSNV----QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQP 232 (454)
Q Consensus 162 ~~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp 232 (454)
..... ......+. .....++.. .++...+|+ ++||+.||.+||| ++++++||
T Consensus 202 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~s~~~~~li-----~~~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 202 RKRKERVKREEVDRRVK-EDQEEYSEK-------------FSEDAKSIC-----RMLLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred CCCCcchhHHHHHHHhh-cccccCCcc-------------CCHHHHHHH-----HHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence 11110 01111111 122222222 236677888 9999999999997 89999999
Q ss_pred ccccCC
Q psy7309 233 ISLEGS 238 (454)
Q Consensus 233 ~f~~~~ 238 (454)
||....
T Consensus 263 ~~~~~~ 268 (285)
T cd05631 263 IFKNIN 268 (285)
T ss_pred hhcCCC
Confidence 998643
No 62
>PTZ00284 protein kinase; Provisional
Probab=99.94 E-value=3.1e-28 Score=254.63 Aligned_cols=185 Identities=23% Similarity=0.259 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCC----------------CeEEecccchhhhhhhcCCCccccc
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYED----------------HVKIGDFGLATNILQKHAGPLAREL 64 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~----------------~vKL~DFGla~~~~~~~~~~~~~~~ 64 (454)
..++.++.||+.||+|||+ .|||||||||+|||++.++ .+||+|||++...
T Consensus 231 ~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~------------ 298 (467)
T PTZ00284 231 RHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDE------------ 298 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccC------------
Confidence 3578899999999999998 5999999999999998765 4999999987532
Q ss_pred cCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 65 TGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
....+..+||+.|+|||++. +..|+.++ ||||+ ||++|||++|++
T Consensus 299 ----------------~~~~~~~~gt~~Y~APE~~~---~~~~~~~~--DiwSl--------------Gvil~elltG~~ 343 (467)
T PTZ00284 299 ----------------RHSRTAIVSTRHYRSPEVVL---GLGWMYST--DMWSM--------------GCIIYELYTGKL 343 (467)
T ss_pred ----------------ccccccccCCccccCcHHhh---cCCCCcHH--HHHHH--------------HHHHHHHHhCCC
Confidence 12234568999999999998 67889888 99999 999999887766
Q ss_pred hh-----HHHHHHHhhhcCCCCCCchhh--------hhhhhhccCCCCCCCcccccccc-ccccccccccchhHHHHHHH
Q psy7309 145 KT-----LEELKHNIRRENGPSTGSNVQ--------KSLQKFQKSPPSVYREWRSSFEW-STVRNNIKSNFQHFLILIHQ 210 (454)
Q Consensus 145 ~~-----~~~l~~~i~~~~~p~~~~~~~--------~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~li~~~~ 210 (454)
.. .+.+.. +....++++..... ..+...........+.....+.. .........+.+.+||
T Consensus 344 pf~~~~~~~~~~~-i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli---- 418 (467)
T PTZ00284 344 LYDTHDNLEHLHL-MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLI---- 418 (467)
T ss_pred CCCCCChHHHHHH-HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHH----
Confidence 32 222222 22222222211100 00000000000000000000000 0000011123444566
Q ss_pred HhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 211 QKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 211 ~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
.+||++||++||||+|+|+||||.....
T Consensus 419 -~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 419 -YGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred -HHhCCcChhhCCCHHHHhcCccccccCC
Confidence 9999999999999999999999987544
No 63
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94 E-value=1.1e-27 Score=242.27 Aligned_cols=186 Identities=28% Similarity=0.362 Sum_probs=123.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.... .
T Consensus 126 ~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--------------------------~ 179 (364)
T cd07875 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------------------------S 179 (364)
T ss_pred HHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC--------------------------C
Confidence 35788999999999999999999999999999999999999999999975421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
......+||+.|+|||++. +..++.++ ||||+ ||++|+|++|+. ...+.+...+..
T Consensus 180 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~ell~g~~pf~~~~~~~~~~~~~~~ 240 (364)
T cd07875 180 FMMTPYVVTRYYRAPEVIL---GMGYKENV--DIWSV--------------GCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240 (364)
T ss_pred CcccCCcccCCcCCHHHHh---CCCCCchh--hHHhH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 2234468899999999998 67788888 99999 999999777654 122333333333
Q ss_pred cCCCCCCc--hhhhhhhhhccCCCCCCC-----ccccc--cccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhh
Q psy7309 157 ENGPSTGS--NVQKSLQKFQKSPPSVYR-----EWRSS--FEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQ 227 (454)
Q Consensus 157 ~~~p~~~~--~~~~~~~~~~~~~~~~~p-----~~~~~--~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e 227 (454)
.+.|.... ........+.. ..+.+. ..... +.|........+..+.+|| .+||+.||.+|||++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll-----~~mL~~dP~~R~t~~e 314 (364)
T cd07875 241 LGTPCPEFMKKLQPTVRTYVE-NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL-----SKMLVIDASKRISVDE 314 (364)
T ss_pred cCCCCHHHHHhhhHHHHHHHh-hCCCcCCCChHhhCccccccccccccccccHHHHHHH-----HHhcCcCcccCCCHHH
Confidence 33332110 00001111110 001000 00000 1111111122335667888 9999999999999999
Q ss_pred hhcCcccccCC
Q psy7309 228 NLCQPISLEGS 238 (454)
Q Consensus 228 ~l~hp~f~~~~ 238 (454)
+|+||||....
T Consensus 315 ~L~hp~~~~~~ 325 (364)
T cd07875 315 ALQHPYINVWY 325 (364)
T ss_pred HhcCccccccc
Confidence 99999997543
No 64
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.94 E-value=1.2e-27 Score=238.74 Aligned_cols=184 Identities=27% Similarity=0.372 Sum_probs=122.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ...
T Consensus 103 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~----------------------~~~ 160 (338)
T cd07859 103 EHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT----------------------PTA 160 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccccc----------------------Ccc
Confidence 4678899999999999999999999999999999999999999999997542110 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
......+||+.|+|||++.. ....|+.++ ||||+ ||++|||++|++.. ...+......
T Consensus 161 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~~~--DvwSl--------------Gvvl~el~tg~~pf~~~~~~~~~~~~~~~ 223 (338)
T cd07859 161 IFWTDYVATRWYRAPELCGS-FFSKYTPAI--DIWSI--------------GCIFAEVLTGKPLFPGKNVVHQLDLITDL 223 (338)
T ss_pred ccccCCCCCCCcCCHHHHhc-cccccCchh--HHHHH--------------HHHHHHHHcCCCCCCCCChHHHHHHHHHH
Confidence 22345689999999999762 125678888 99999 99999987766522 1112111111
Q ss_pred cCCCCCCch-------hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 157 ENGPSTGSN-------VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 157 ~~~p~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
.+.|..... ....+..+.......+....+ ..++.+.+++ .+||+.||++|||++|++
T Consensus 224 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~li-----~~~l~~~P~~Rpt~~e~l 288 (338)
T cd07859 224 LGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFP----------NADPLALRLL-----ERLLAFDPKDRPTAEEAL 288 (338)
T ss_pred hCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcC----------CCChHHHHHH-----HHHcCcCcccCCCHHHHh
Confidence 122211100 011111111111111111111 1235566777 999999999999999999
Q ss_pred cCcccccCCC
Q psy7309 230 CQPISLEGSS 239 (454)
Q Consensus 230 ~hp~f~~~~~ 239 (454)
+||||.....
T Consensus 289 ~hp~f~~~~~ 298 (338)
T cd07859 289 ADPYFKGLAK 298 (338)
T ss_pred cCchhhhcCc
Confidence 9999986554
No 65
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.94 E-value=2.3e-27 Score=236.29 Aligned_cols=158 Identities=24% Similarity=0.322 Sum_probs=120.6
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
+.++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++..... .
T Consensus 95 ~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~-------------------------~ 149 (325)
T cd05594 95 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-------------------------D 149 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC-------------------------C
Confidence 4678899999999999997 7999999999999999999999999999874311 1
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.......+||+.|+|||++. +..|+.++ ||||+ ||++|+|++|.. |
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~tG~~---------------P 195 (325)
T cd05594 150 GATMKTFCGTPEYLAPEVLE---DNDYGRAV--DWWGL--------------GVVMYEMMCGRL---------------P 195 (325)
T ss_pred CcccccccCCcccCCHHHHc---cCCCCCcc--ccccc--------------cceeeeeccCCC---------------C
Confidence 11223457999999999997 66788888 99999 999999887654 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCcccc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISL 235 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~ 235 (454)
+...........+. .....+|.. .++...++| ++||+.||++|+ ++.++++||||.
T Consensus 196 f~~~~~~~~~~~i~-~~~~~~p~~-------------~~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~il~h~~~~ 256 (325)
T cd05594 196 FYNQDHEKLFELIL-MEEIRFPRT-------------LSPEAKSLL-----SGLLKKDPKQRLGGGPDDAKEIMQHKFFA 256 (325)
T ss_pred CCCCCHHHHHHHHh-cCCCCCCCC-------------CCHHHHHHH-----HHHhhcCHHHhCCCCCCCHHHHhcCCCcC
Confidence 22222222222222 222333333 236677888 999999999997 899999999998
Q ss_pred cC
Q psy7309 236 EG 237 (454)
Q Consensus 236 ~~ 237 (454)
..
T Consensus 257 ~~ 258 (325)
T cd05594 257 GI 258 (325)
T ss_pred CC
Confidence 53
No 66
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.94 E-value=9.7e-28 Score=237.64 Aligned_cols=158 Identities=28% Similarity=0.407 Sum_probs=121.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 93 ~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~-------------------------~~ 147 (312)
T cd05585 93 SRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK-------------------------DD 147 (312)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCcc-------------------------CC
Confidence 46788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|.+ |+
T Consensus 148 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------Gvil~el~tg~~---------------pf 193 (312)
T cd05585 148 DKTNTFCGTPEYLAPELLL---GHGYTKAV--DWWTL--------------GVLLYEMLTGLP---------------PF 193 (312)
T ss_pred CccccccCCcccCCHHHHc---CCCCCCcc--ceech--------------hHHHHHHHhCCC---------------Cc
Confidence 2234568999999999998 67788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC---ChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP---SSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp---ta~e~l~hp~f~~~ 237 (454)
.+.........+. .....+|.. .++.+.++| .+||+.||++|| ++.|++.||||...
T Consensus 194 ~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 194 YDENVNEMYRKIL-QEPLRFPDG-------------FDRDAKDLL-----IGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCCCHHHHHHHHH-cCCCCCCCc-------------CCHHHHHHH-----HHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 3333333333333 223333333 236677888 999999999997 57999999999864
No 67
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.94 E-value=1.2e-27 Score=233.35 Aligned_cols=176 Identities=26% Similarity=0.354 Sum_probs=118.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..... .
T Consensus 108 ~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~--------------------------~ 161 (288)
T cd07863 108 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC--------------------------Q 161 (288)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC--------------------------c
Confidence 46789999999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
.......||..|+|||++. +..++.++ ||||+ ||++|+|+++++.. .+.+...+..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (288)
T cd07863 162 MALTPVVVTLWYRAPEVLL---QSTYATPV--DMWSV--------------GCIFAEMFRRKPLFCGNSEADQLGKIFDL 222 (288)
T ss_pred ccCCCccccccccCchHhh---CCCCCCcc--hhhhH--------------HHHHHHHHhCCcCcCCCCHHHHHHHHHHH
Confidence 1233457899999999987 56788888 99999 99999987766521 1222222221
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.+.|.... +.... . .....+..... ..+....+ ..+....+++ .+||+.||++|||+.|++.||||
T Consensus 223 ~~~~~~~~-~~~~~-~---~~~~~~~~~~~-~~~~~~~~-~~~~~~~~li-----~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 223 IGLPPEDD-WPRDV-T---LPRGAFSPRGP-RPVQSVVP-EIEESGAQLL-----LEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hCCCChhh-Ccccc-c---ccccccCCCCC-CchHHhCc-CcCHHHHHHH-----HHHhccCcccCCCHHHHhcCCCC
Confidence 11111110 00000 0 00000000000 01111111 1235567888 99999999999999999999998
No 68
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94 E-value=2.7e-27 Score=236.14 Aligned_cols=160 Identities=26% Similarity=0.377 Sum_probs=120.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 96 ~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~-------------------------~~~ 150 (330)
T cd05586 96 DRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANL-------------------------TDN 150 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCC-------------------------CCC
Confidence 4678899999999999999999999999999999999999999999987432 112
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++.. ...++.++ ||||+ ||++|+|++|.. |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~~--Dvwsl--------------Gvil~elltG~~---------------Pf 197 (330)
T cd05586 151 KTTNTFCGTTEYLAPEVLLD--EKGYTKHV--DFWSL--------------GVLVFEMCCGWS---------------PF 197 (330)
T ss_pred CCccCccCCccccCHHHHcC--CCCCCCcc--ceecc--------------ccEEEEeccCCC---------------CC
Confidence 22345689999999999862 33577888 99999 999999887654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC----ChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP----SSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp----ta~e~l~hp~f~~~ 237 (454)
...........+... ...++.. ..++...+++ ++||+.||++|| ++.|+++||||...
T Consensus 198 ~~~~~~~~~~~i~~~-~~~~~~~------------~~~~~~~~li-----~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 198 YAEDTQQMYRNIAFG-KVRFPKN------------VLSDEGRQFV-----KGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCCHHHHHHHHHcC-CCCCCCc------------cCCHHHHHHH-----HHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 333333333333222 2223322 1236677888 999999999998 68999999999853
No 69
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94 E-value=1.9e-27 Score=240.22 Aligned_cols=186 Identities=29% Similarity=0.392 Sum_probs=124.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++... ..
T Consensus 123 ~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~--------------------------~~ 176 (359)
T cd07876 123 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC--------------------------TN 176 (359)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc--------------------------cC
Confidence 3578899999999999999999999999999999999999999999987432 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......||+.|+|||++. +..|+.++ ||||+ ||++|+|++|+.. ..+.+...+..
T Consensus 177 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~el~tg~~pf~~~~~~~~~~~~~~~ 237 (359)
T cd07876 177 FMMTPYVVTRYYRAPEVIL---GMGYKENV--DIWSV--------------GCIMGELVKGSVIFQGTDHIDQWNKVIEQ 237 (359)
T ss_pred ccCCCCcccCCCCCchhcc---CCCCCcch--hhHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 2234568899999999998 67788888 99999 9998887766541 22233233333
Q ss_pred cCCCCCCch--hhhhhhhhccCCCCCCC-----ccccccccc--cccccccccchhHHHHHHHHhhhcCCCCCCCCChhh
Q psy7309 157 ENGPSTGSN--VQKSLQKFQKSPPSVYR-----EWRSSFEWS--TVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQ 227 (454)
Q Consensus 157 ~~~p~~~~~--~~~~~~~~~~~~~~~~p-----~~~~~~~~~--~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e 227 (454)
.+.|..... .......+.. ....++ +..+.+.+. .......++.+.+|| .+||+.||++|||+.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~mL~~dP~~R~t~~e 311 (359)
T cd07876 238 LGTPSAEFMNRLQPTVRNYVE-NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLL-----SKMLVIDPDKRISVDE 311 (359)
T ss_pred cCCCcHHHHHHHHHHHHHHHh-hCCCCCCcchhhhccccccccccccccccchhHHHHH-----HHHhccCcccCCCHHH
Confidence 333322110 0111111111 111111 100000000 001122346677888 9999999999999999
Q ss_pred hhcCcccccCC
Q psy7309 228 NLCQPISLEGS 238 (454)
Q Consensus 228 ~l~hp~f~~~~ 238 (454)
+|+||||....
T Consensus 312 ~l~hp~~~~~~ 322 (359)
T cd07876 312 ALRHPYITVWY 322 (359)
T ss_pred HhcCchhhhhc
Confidence 99999998644
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.94 E-value=1.4e-27 Score=238.31 Aligned_cols=157 Identities=25% Similarity=0.319 Sum_probs=120.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 95 ~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~-------------------------~~ 149 (328)
T cd05593 95 DRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT-------------------------DA 149 (328)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCC-------------------------cc
Confidence 46788999999999999999999999999999999999999999999874311 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ ||||+ ||++|+|++|+. |+
T Consensus 150 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~elltG~~---------------Pf 195 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLE---DNDYGRAV--DWWGL--------------GVVMYEMMCGRL---------------PF 195 (328)
T ss_pred cccccccCCcCccChhhhc---CCCCCccC--Ccccc--------------chHHHHHhhCCC---------------CC
Confidence 1233467999999999997 66788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
...........+. .....+|... ++...++| ++||+.||++|+ ++.|+++||||..
T Consensus 196 ~~~~~~~~~~~~~-~~~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 196 YNQDHEKLFELIL-MEDIKFPRTL-------------SADAKSLL-----SGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred CCCCHHHHHHHhc-cCCccCCCCC-------------CHHHHHHH-----HHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 3322222222222 2223334332 36677888 999999999997 8999999999975
No 71
>KOG0604|consensus
Probab=99.94 E-value=1.8e-27 Score=222.90 Aligned_cols=165 Identities=23% Similarity=0.315 Sum_probs=124.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
++-.|++||..|+.|||+.+|.||||||+|+|...++ .+||+|||+|+...
T Consensus 162 ea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~-------------------------- 215 (400)
T KOG0604|consen 162 EASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ-------------------------- 215 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC--------------------------
Confidence 5778999999999999999999999999999997654 58999999998542
Q ss_pred CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
......+.+-||+|.|||++. ..+|+..+ |+||+ |+++|-|+.|-|+....--
T Consensus 216 ~~~~L~TPc~TPyYvaPevlg---~eKydksc--dmwSl--------------gVimYIlLCGyPPFYS~hg-------- 268 (400)
T KOG0604|consen 216 EPGDLMTPCFTPYYVAPEVLG---PEKYDKSC--DMWSL--------------GVIMYILLCGYPPFYSNHG-------- 268 (400)
T ss_pred CCccccCCcccccccCHHHhC---chhcCCCC--Cccch--------------hHHHHHhhcCCCcccccCC--------
Confidence 134556678999999999998 67899999 99999 7777775554442221100
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
.....-.++-...+.+.||+. +|+. .++.++++| +.+|..+|.+|.|++|++.|||...-.
T Consensus 269 ----~aispgMk~rI~~gqy~FP~p----EWs~-----VSe~aKdlI-----R~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 269 ----LAISPGMKRRIRTGQYEFPEP----EWSC-----VSEAAKDLI-----RKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred ----ccCChhHHhHhhccCccCCCh----hHhH-----HHHHHHHHH-----HHHhcCCchhheeHHHhhcCchhcccc
Confidence 000000111111556667765 5754 458888999 999999999999999999999998543
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.94 E-value=1.6e-27 Score=237.02 Aligned_cols=158 Identities=28% Similarity=0.419 Sum_probs=121.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 96 ~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~-------------------------~~ 150 (320)
T cd05590 96 ARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF-------------------------NG 150 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc-------------------------CC
Confidence 35788999999999999999999999999999999999999999999874311 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||++. +..++.++ ||||+ ||++|||++|+. |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~---------------Pf 196 (320)
T cd05590 151 KTTSTFCGTPDYIAPEILQ---EMLYGPSV--DWWAM--------------GVLLYEMLCGHA---------------PF 196 (320)
T ss_pred CcccccccCccccCHHHHc---CCCCCCcc--chhhh--------------HHHHHHHhhCCC---------------CC
Confidence 2233467999999999987 66788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh------hhhhcCcccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS------EQNLCQPISL 235 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta------~e~l~hp~f~ 235 (454)
...+.......+. .....+|... +....++| ++||+.||++||++ +++++||||.
T Consensus 197 ~~~~~~~~~~~i~-~~~~~~~~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~ 257 (320)
T cd05590 197 EAENEDDLFEAIL-NDEVVYPTWL-------------SQDAVDIL-----KAFMTKNPTMRLGSLTLGGEEAILRHPFFK 257 (320)
T ss_pred CCCCHHHHHHHHh-cCCCCCCCCC-------------CHHHHHHH-----HHHcccCHHHCCCCCCCCCHHHHHcCCCcC
Confidence 3333333333333 2223334332 26677888 99999999999998 8999999997
Q ss_pred cC
Q psy7309 236 EG 237 (454)
Q Consensus 236 ~~ 237 (454)
..
T Consensus 258 ~~ 259 (320)
T cd05590 258 EL 259 (320)
T ss_pred CC
Confidence 53
No 73
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.94 E-value=1.6e-27 Score=237.93 Aligned_cols=154 Identities=26% Similarity=0.343 Sum_probs=120.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 118 ~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~--------------------------- 170 (329)
T PTZ00263 118 DVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD--------------------------- 170 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC---------------------------
Confidence 35778999999999999999999999999999999999999999999874421
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.....+||+.|+|||++. +..++.++ ||||+ ||++|||++|.. |+
T Consensus 171 -~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~elltg~~---------------pf 215 (329)
T PTZ00263 171 -RTFTLCGTPEYLAPEVIQ---SKGHGKAV--DWWTM--------------GVLLYEFIAGYP---------------PF 215 (329)
T ss_pred -CcceecCChhhcCHHHHc---CCCCCCcc--eeech--------------HHHHHHHHcCCC---------------CC
Confidence 122357999999999998 56678888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~ 236 (454)
.+.........+. .....+|... +....+|| ++||+.||.+||+ +++++.||||..
T Consensus 216 ~~~~~~~~~~~i~-~~~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 216 FDDTPFRIYEKIL-AGRLKFPNWF-------------DGRARDLV-----KGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred CCCCHHHHHHHHh-cCCcCCCCCC-------------CHHHHHHH-----HHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 3333333333333 2233344432 26677888 9999999999997 699999999985
No 74
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=1.1e-27 Score=241.88 Aligned_cols=181 Identities=27% Similarity=0.318 Sum_probs=117.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.||+.||.|||++||+||||||+|||++.++.+||+|||++.... ..
T Consensus 157 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~--------------------------~~ 210 (357)
T PHA03209 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV--------------------------VA 210 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccc--------------------------cC
Confidence 4678999999999999999999999999999999999999999999987421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC-chh--------------h
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD-RPK--------------T 146 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~-~~~--------------~ 146 (454)
.......||+.|+|||++. +..|+.++ ||||+ ||++|||+++ .+. .
T Consensus 211 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvvl~ell~~~~~~f~~~~~~~~~~~~~~ 271 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLA---RDKYNSKA--DIWSA--------------GIVLFEMLAYPSTIFEDPPSTPEEYVKSC 271 (357)
T ss_pred cccccccccccccCCeecC---CCCCCchh--hHHHH--------------HHHHHHHHHcCCccccCCCCcHHHHHHHH
Confidence 1233467999999999998 66788888 99999 9999996542 110 1
Q ss_pred HHHHHHHhhhcCCCC---CCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCC
Q psy7309 147 LEELKHNIRRENGPS---TGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKR 222 (454)
Q Consensus 147 ~~~l~~~i~~~~~p~---~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~R 222 (454)
...+...+...+... ...........+.. ......|.. .+........+....++| .+||+.||++|
T Consensus 272 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li-----~~mL~~dP~~R 342 (357)
T PHA03209 272 HSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYT----RYPCFQRVNLPIDGEFLV-----HKMLTFDAAMR 342 (357)
T ss_pred HHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCccc----ccHHHhccCCCchHHHHH-----HHHHcCCcccC
Confidence 112222222111111 10011111111100 000000000 011111112335666777 99999999999
Q ss_pred CChhhhhcCccccc
Q psy7309 223 PSSEQNLCQPISLE 236 (454)
Q Consensus 223 pta~e~l~hp~f~~ 236 (454)
|||.|+|+||||..
T Consensus 343 pta~e~l~hp~f~~ 356 (357)
T PHA03209 343 PSAEEILNYPMFAQ 356 (357)
T ss_pred cCHHHHhcCchhcc
Confidence 99999999999974
No 75
>KOG0595|consensus
Probab=99.94 E-value=1.7e-27 Score=231.75 Aligned_cols=162 Identities=25% Similarity=0.359 Sum_probs=128.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC------CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE------DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA 76 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~------~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (454)
.++.++.||+.||++||+++||||||||+|||++.+ -.+||+|||+|+.+.
T Consensus 110 t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~----------------------- 166 (429)
T KOG0595|consen 110 TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ----------------------- 166 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC-----------------------
Confidence 578999999999999999999999999999999875 248999999999763
Q ss_pred cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309 77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR 156 (454)
Q Consensus 77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~ 156 (454)
......+.+|+|.|||||++. ...|+.|+ |+||+ |+++|+|++|++
T Consensus 167 ---~~~~a~tlcGSplYMAPEV~~---~~~YdAKA--DLWSi--------------G~Ilyq~l~g~~------------ 212 (429)
T KOG0595|consen 167 ---PGSMAETLCGSPLYMAPEVIM---SQQYDAKA--DLWSI--------------GTILYQCLTGKP------------ 212 (429)
T ss_pred ---chhHHHHhhCCccccCHHHHH---hccccchh--hHHHH--------------HHHHHHHHhCCC------------
Confidence 234556789999999999998 78999999 99999 999999887665
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
|+...+..+.+..+.++... .|... ...++...+++ ...|..+|..|.+..+-+.|++...
T Consensus 213 ---Pf~a~t~~eL~~~~~k~~~~-~~~~~----------~~~s~~~~~Ll-----~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 213 ---PFDAETPKELLLYIKKGNEI-VPVLP----------AELSNPLRELL-----ISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ---CccccCHHHHHHHHhccccc-cCchh----------hhccCchhhhh-----hHHHhcCccccCchHHhhhhhhccc
Confidence 45555555555555433222 22211 22335666888 8999999999999999999999887
Q ss_pred CCCC
Q psy7309 237 GSSS 240 (454)
Q Consensus 237 ~~~~ 240 (454)
....
T Consensus 274 ~p~~ 277 (429)
T KOG0595|consen 274 NPQD 277 (429)
T ss_pred Cccc
Confidence 6643
No 76
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94 E-value=3.4e-27 Score=234.83 Aligned_cols=157 Identities=27% Similarity=0.354 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 96 ~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~-------------------------~~~ 150 (323)
T cd05575 96 PRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGI-------------------------EHS 150 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccc-------------------------cCC
Confidence 3577899999999999999999999999999999999999999999987431 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|.+ |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~ell~g~~---------------pf 196 (323)
T cd05575 151 KTTSTFCGTPEYLAPEVLR---KQPYDRTV--DWWCL--------------GAVLYEMLYGLP---------------PF 196 (323)
T ss_pred CccccccCChhhcChhhhc---CCCCCccc--ccccc--------------chhhhhhhcCCC---------------CC
Confidence 2234567999999999987 66788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh----hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS----EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta----~e~l~hp~f~~ 236 (454)
...+.......+... ...++.. .++...++| ++||+.||++||++ .|++.||||..
T Consensus 197 ~~~~~~~~~~~i~~~-~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 197 YSRDTAEMYDNILNK-PLRLKPN-------------ISVSARHLL-----EGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred CCCCHHHHHHHHHcC-CCCCCCC-------------CCHHHHHHH-----HHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 333333333333322 2222222 126677888 99999999999998 59999999975
No 77
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.94 E-value=1.8e-27 Score=236.95 Aligned_cols=158 Identities=23% Similarity=0.324 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 95 ~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~-------------------------~~ 149 (323)
T cd05595 95 ERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-------------------------DG 149 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccC-------------------------CC
Confidence 46788999999999999999999999999999999999999999999874311 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||++. +..++.++ ||||+ ||++|||++|+. |+
T Consensus 150 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~ell~g~~---------------Pf 195 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLE---DNDYGRAV--DWWGL--------------GVVMYEMMCGRL---------------PF 195 (323)
T ss_pred CccccccCCcCcCCccccc---CCCCCchh--chhhh--------------HHHHHHHHhCCC---------------CC
Confidence 2233467999999999997 66788888 99999 999999877653 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
...........+. .....+|... ++...++| .+||+.||++|+ ++.++++||||..
T Consensus 196 ~~~~~~~~~~~~~-~~~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 196 YNQDHERLFELIL-MEEIRFPRTL-------------SPEAKSLL-----AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred CCCCHHHHHHHHh-cCCCCCCCCC-------------CHHHHHHH-----HHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 2222222222222 1222333332 36677888 999999999998 8999999999986
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 257 ~ 257 (323)
T cd05595 257 I 257 (323)
T ss_pred C
Confidence 4
No 78
>KOG0610|consensus
Probab=99.94 E-value=4.6e-27 Score=228.80 Aligned_cols=186 Identities=24% Similarity=0.278 Sum_probs=142.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCcccc----cc---------Ccc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARE----LT---------GYI 68 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~----~~---------~~~ 68 (454)
+.|+.++.+|+.||+|||-.|||.|||||||||+-++|+|-|+||.|+.............. .. +-.
T Consensus 179 ~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f 258 (459)
T KOG0610|consen 179 SAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCF 258 (459)
T ss_pred hhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccccccccc
Confidence 46899999999999999999999999999999999999999999999976522111000000 00 000
Q ss_pred CCC-CCC-----------------CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHH
Q psy7309 69 LPP-IDS-----------------TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRV 130 (454)
Q Consensus 69 ~~~-~~~-----------------~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~ 130 (454)
++. ... ......+....+++||-.|.|||++. +.+.+..+ |+|++
T Consensus 259 ~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~---G~GHgsAV--DWWtf------------ 321 (459)
T KOG0610|consen 259 SPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR---GEGHGSAV--DWWTF------------ 321 (459)
T ss_pred ccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee---cCCCCchh--hHHHH------------
Confidence 000 000 00013345677899999999999999 78889999 99999
Q ss_pred hcceeeeeecCCchhhHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHH
Q psy7309 131 LWGYLKAEVYKDRPKTLEELKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQ 210 (454)
Q Consensus 131 ~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~ 210 (454)
||++|||+-| ..||.+.+..+++.++. ..+..||... ..+..+++||
T Consensus 322 --GIflYEmLyG---------------~TPFKG~~~~~Tl~NIv-~~~l~Fp~~~-----------~vs~~akDLI---- 368 (459)
T KOG0610|consen 322 --GIFLYEMLYG---------------TTPFKGSNNKETLRNIV-GQPLKFPEEP-----------EVSSAAKDLI---- 368 (459)
T ss_pred --HHHHHHHHhC---------------CCCcCCCCchhhHHHHh-cCCCcCCCCC-----------cchhHHHHHH----
Confidence 9999996443 35888888888888888 5566677763 3457889999
Q ss_pred HhhhcCCCCCCCCC----hhhhhcCcccccCC
Q psy7309 211 QKWCLNHDPSKRPS----SEQNLCQPISLEGS 238 (454)
Q Consensus 211 ~~~~L~~dP~~Rpt----a~e~l~hp~f~~~~ 238 (454)
+++|.+||++|.. |.|+.+||||....
T Consensus 369 -r~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn 399 (459)
T KOG0610|consen 369 -RKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN 399 (459)
T ss_pred -HHHhccChhhhhccccchHHhhcCccccCCC
Confidence 9999999999999 99999999998643
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94 E-value=4e-27 Score=235.04 Aligned_cols=164 Identities=25% Similarity=0.306 Sum_probs=117.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ...
T Consensus 105 ~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~------------------------~~~ 160 (332)
T cd05614 105 DEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS------------------------EEK 160 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccc------------------------cCC
Confidence 46788999999999999999999999999999999999999999999875421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++.. ...++.++ ||||+ ||++|||++|....... .
T Consensus 161 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~elltg~~pf~~~-----------~ 211 (332)
T cd05614 161 ERTYSFCGTIEYMAPEIIRG--KGGHGKAV--DWWSL--------------GILIFELLTGASPFTLE-----------G 211 (332)
T ss_pred CccccccCCccccCHHHhcC--CCCCCCcc--ccccc--------------hhhhhhhhcCCCCCCCC-----------C
Confidence 22334689999999999871 23467777 99999 99999988765421000 0
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
...........+. .....++.. .++.+.+++ .+||+.||++|| +++|+++||||..
T Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 212 ERNTQSEVSRRIL-KCDPPFPSF-------------IGPEAQDLL-----HKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred CCCCHHHHHHHHh-cCCCCCCCC-------------CCHHHHHHH-----HHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 0000111111111 122223322 236677888 999999999999 7889999999985
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 273 ~ 273 (332)
T cd05614 273 L 273 (332)
T ss_pred C
Confidence 3
No 80
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.94 E-value=2e-27 Score=232.89 Aligned_cols=154 Identities=27% Similarity=0.326 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 101 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~--------------------------- 153 (291)
T cd05612 101 STGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD--------------------------- 153 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC---------------------------
Confidence 35678999999999999999999999999999999999999999999875421
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.....+||+.|+|||++. +..++.++ ||||+ ||++|+|++|+. |+
T Consensus 154 -~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~~l~~g~~---------------pf 198 (291)
T cd05612 154 -RTWTLCGTPEYLAPEVIQ---SKGHNKAV--DWWAL--------------GILIYEMLVGYP---------------PF 198 (291)
T ss_pred -CcccccCChhhcCHHHHc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 122357999999999987 56778888 99999 999999877653 23
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~ 236 (454)
.+.........+. .....+|... ++.+.++| ++||+.||.+||+ ++|++.||||..
T Consensus 199 ~~~~~~~~~~~i~-~~~~~~~~~~-------------~~~~~~li-----~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 199 FDDNPFGIYEKIL-AGKLEFPRHL-------------DLYAKDLI-----KKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred CCCCHHHHHHHHH-hCCcCCCccC-------------CHHHHHHH-----HHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 3332223333332 2223333332 36677888 9999999999995 999999999975
No 81
>KOG0596|consensus
Probab=99.94 E-value=3.2e-27 Score=236.63 Aligned_cols=164 Identities=24% Similarity=0.322 Sum_probs=115.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.+.+|+|.|++++|++||||.||||.|+|+- .|.+||+|||.|..+... ....
T Consensus 461 ~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D-----------------------TTsI 516 (677)
T KOG0596|consen 461 FLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD-----------------------TTSI 516 (677)
T ss_pred HHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcc-----------------------ccce
Confidence 4788999999999999999999999999999997 789999999999876432 2234
Q ss_pred CCcCcccccceecccccccc------ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309 83 SHTGQVGTALYAAPELDSHG------VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR 156 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~------~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~ 156 (454)
...+.+||+.||+||.+... .+..+....++||||| |||+|+|.-|+++.-+-.
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSL--------------GCILYqMvYgktPf~~~~------ 576 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSL--------------GCILYQMVYGKTPFGQII------ 576 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhh--------------hhHHHHHHhcCCchHHHH------
Confidence 56678999999999998621 1112223344499999 999999766555322211
Q ss_pred cCCCCCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
+....+..+. .+-...||...+ . .++ |++|+.||.+||++|||..++|+|||..
T Consensus 577 --------n~~aKl~aI~~P~~~Iefp~~~~--~----------~~l-----i~~mK~CL~rdPkkR~si~eLLqhpFl~ 631 (677)
T KOG0596|consen 577 --------NQIAKLHAITDPNHEIEFPDIPE--N----------DEL-----IDVMKCCLARDPKKRWSIPELLQHPFLQ 631 (677)
T ss_pred --------HHHHHHHhhcCCCccccccCCCC--c----------hHH-----HHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence 0111111111 123345555432 1 113 3555999999999999999999999976
No 82
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.94 E-value=3.1e-27 Score=234.96 Aligned_cols=157 Identities=27% Similarity=0.415 Sum_probs=121.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 96 ~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~-------------------------~~~ 150 (321)
T cd05591 96 PRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGI-------------------------LNG 150 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecc-------------------------cCC
Confidence 3578899999999999999999999999999999999999999999987432 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+. |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~el~tg~~---------------Pf 196 (321)
T cd05591 151 VTTTTFCGTPDYIAPEILQ---ELEYGPSV--DWWAL--------------GVLMYEMMAGQP---------------PF 196 (321)
T ss_pred ccccccccCccccCHHHHc---CCCCCCcc--ceech--------------hHHHHHHhcCCC---------------CC
Confidence 2234567999999999987 66788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-------ChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-------SSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-------ta~e~l~hp~f 234 (454)
...+....+..+.. ....+|... +....++| ++||+.||++|| +++++++||||
T Consensus 197 ~~~~~~~~~~~i~~-~~~~~p~~~-------------~~~~~~ll-----~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~ 257 (321)
T cd05591 197 EADNEDDLFESILH-DDVLYPVWL-------------SKEAVSIL-----KAFMTKNPNKRLGCVASQGGEDAIKQHPFF 257 (321)
T ss_pred CCCCHHHHHHHHHc-CCCCCCCCC-------------CHHHHHHH-----HHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence 33333333333332 223334332 26667888 999999999999 89999999999
Q ss_pred cc
Q psy7309 235 LE 236 (454)
Q Consensus 235 ~~ 236 (454)
..
T Consensus 258 ~~ 259 (321)
T cd05591 258 KE 259 (321)
T ss_pred CC
Confidence 64
No 83
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.94 E-value=2.3e-27 Score=235.54 Aligned_cols=158 Identities=27% Similarity=0.406 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ...
T Consensus 96 ~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~-------------------------~~~ 150 (316)
T cd05620 96 YRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENV-------------------------FGD 150 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecc-------------------------cCC
Confidence 3578899999999999999999999999999999999999999999986321 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+. |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~el~~g~~---------------Pf 196 (316)
T cd05620 151 NRASTFCGTPDYIAPEILQ---GLKYTFSV--DWWSF--------------GVLLYEMLIGQS---------------PF 196 (316)
T ss_pred CceeccCCCcCccCHHHHc---CCCCCccc--chhhh--------------HHHHHHHHhCCC---------------CC
Confidence 2334568999999999998 67788888 99999 999999776653 23
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-hhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-EQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-~e~l~hp~f~~~ 237 (454)
.+.........+. ...+.+|.+ .+..+.++| ++||+.||++|||+ +++++||||...
T Consensus 197 ~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 197 HGDDEDELFESIR-VDTPHYPRW-------------ITKESKDIL-----EKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CCCCHHHHHHHHH-hCCCCCCCC-------------CCHHHHHHH-----HHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 2222222333322 222333333 236677888 99999999999998 588899999764
No 84
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.94 E-value=3.8e-27 Score=236.48 Aligned_cols=154 Identities=23% Similarity=0.287 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 131 ~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~--------------------------- 183 (340)
T PTZ00426 131 DVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT--------------------------- 183 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC---------------------------
Confidence 35788999999999999999999999999999999999999999999874321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.....+||+.|+|||++. +..++.++ ||||+ ||++|||++|.+ |+
T Consensus 184 -~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~ell~G~~---------------Pf 228 (340)
T PTZ00426 184 -RTYTLCGTPEYIAPEILL---NVGHGKAA--DWWTL--------------GIFIYEILVGCP---------------PF 228 (340)
T ss_pred -CcceecCChhhcCHHHHh---CCCCCccc--cccch--------------hhHHHHHhcCCC---------------CC
Confidence 123457999999999997 56778888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
...........+. .....+|... ++.+.++| ++||+.||.+|+ |++++++||||..
T Consensus 229 ~~~~~~~~~~~i~-~~~~~~p~~~-------------~~~~~~li-----~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 229 YANEPLLIYQKIL-EGIIYFPKFL-------------DNNCKHLM-----KKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred CCCCHHHHHHHHh-cCCCCCCCCC-------------CHHHHHHH-----HHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 3322222233332 2222334332 25667888 999999999995 8999999999975
No 85
>KOG0577|consensus
Probab=99.94 E-value=1e-26 Score=233.90 Aligned_cols=196 Identities=24% Similarity=0.356 Sum_probs=150.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+|-.|+.+.|.||+|||+++.||||||..|||++..|.|||+|||.|....
T Consensus 127 EIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~----------------------------- 177 (948)
T KOG0577|consen 127 EIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA----------------------------- 177 (948)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-----------------------------
Confidence 467789999999999999999999999999999999999999999987432
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+++|||+|||||+++.-..+.|+.++ ||||| |++..|+.. ..+|..
T Consensus 178 PAnsFvGTPywMAPEVILAMDEGqYdgkv--DvWSL--------------GITCIELAE---------------RkPPlF 226 (948)
T KOG0577|consen 178 PANSFVGTPYWMAPEVILAMDEGQYDGKV--DVWSL--------------GITCIELAE---------------RKPPLF 226 (948)
T ss_pred chhcccCCccccchhHheeccccccCCcc--ceeec--------------cchhhhhhh---------------cCCCcc
Confidence 34568999999999998755578899999 99999 999999754 345666
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSGL 242 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~~ 242 (454)
..+-...+.-+..+..+.++.. .|+ .....|+ ..||++-|.+|||++++|.|+|.....++.
T Consensus 227 nMNAMSALYHIAQNesPtLqs~----eWS--------~~F~~Fv-----d~CLqKipqeRptse~ll~H~fv~R~Rp~t- 288 (948)
T KOG0577|consen 227 NMNAMSALYHIAQNESPTLQSN----EWS--------DYFRNFV-----DSCLQKIPQERPTSEELLKHRFVLRERPPT- 288 (948)
T ss_pred CchHHHHHHHHHhcCCCCCCCc----hhH--------HHHHHHH-----HHHHhhCcccCCcHHHHhhcchhccCCCch-
Confidence 6666666666666777777754 565 5556777 999999999999999999999987544321
Q ss_pred CccCccccccCCCCCCCCcchHHHHHHHHHHhcCCCChhHHHHHHHHhCCCCC
Q psy7309 243 SVLGSEQLLTCDHIPPPLVGETVLQDMVRQTLSNPQSKGYKYLVAACFNQKVS 295 (454)
Q Consensus 243 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~f~q~~~ 295 (454)
++. --...-+++++ .-+.-.|++..+.+|.....
T Consensus 289 -------vi~--------dLIqRTKdaVr----ELDNlqYrKMkKilf~e~~n 322 (948)
T KOG0577|consen 289 -------VIM--------DLIQRTKDAVR----ELDNLQYRKMKKILFQEAPN 322 (948)
T ss_pred -------HHH--------HHHHHHHHHHH----HhhhhhHHHHHHHHhhccCC
Confidence 000 00112233333 44556788888888865433
No 86
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.94 E-value=3.6e-27 Score=236.44 Aligned_cols=180 Identities=29% Similarity=0.389 Sum_probs=119.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 118 ~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~---------------------------- 169 (343)
T cd07878 118 EHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD---------------------------- 169 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC----------------------------
Confidence 4678999999999999999999999999999999999999999999987432
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
......+||+.|+|||++.. ...++.++ ||||+ ||++|+|++|.+. ..+.+......
T Consensus 170 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~el~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07878 170 DEMTGYVATRWYRAPEIMLN--WMHYNQTV--DIWSV--------------GCIMAELLKGKALFPGNDYIDQLKRIMEV 231 (343)
T ss_pred CCcCCccccccccCchHhcC--CccCCchh--hhHhH--------------HHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 12334578999999999871 25678888 99999 9999997765542 12222222221
Q ss_pred cCCCCCCchhhh----hhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 157 ENGPSTGSNVQK----SLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 157 ~~~p~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
.+.+... .... ....+... ....+. ..+..... ..++.+.+|| .+||+.||.+|||+.|+|+||
T Consensus 232 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~-~~~~~~~~li-----~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 232 VGTPSPE-VLKKISSEHARKYIQS-LPHMPQ----QDLKKIFR-GANPLAIDLL-----EKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred hCCCCHH-HHHhcchhhHHHHhhc-cccccc----hhHHHhcc-CCCHHHHHHH-----HHHcCCChhhCCCHHHHhcCc
Confidence 2222111 0000 00001000 000010 01111111 1224556777 999999999999999999999
Q ss_pred ccccCCC
Q psy7309 233 ISLEGSS 239 (454)
Q Consensus 233 ~f~~~~~ 239 (454)
||.....
T Consensus 300 ~~~~~~~ 306 (343)
T cd07878 300 YFSQYHD 306 (343)
T ss_pred chhccCC
Confidence 9987544
No 87
>KOG0662|consensus
Probab=99.94 E-value=5.7e-27 Score=205.11 Aligned_cols=182 Identities=25% Similarity=0.394 Sum_probs=143.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||.|+|++++.||||||.|.|++.+|++|++|||+|+.+.- ..
T Consensus 101 ~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi-------------------------pv 155 (292)
T KOG0662|consen 101 EIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI-------------------------PV 155 (292)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC-------------------------ce
Confidence 35788999999999999999999999999999999999999999999997642 12
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-Cch-----hhHHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRP-----KTLEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~-----~~~~~l~~~i~ 155 (454)
......+-|..|++|.++. +..-|+++. |+||. ||++.|+.. |+| ...+++.++++
T Consensus 156 rcysaevvtlwyrppdvlf--gakly~tsi--dmwsa--------------gcifaelanagrplfpg~dvddqlkrif~ 217 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLF--GAKLYSTSI--DMWSA--------------GCIFAELANAGRPLFPGNDVDDQLKRIFR 217 (292)
T ss_pred EeeeceeeeeeccCcceee--eeehhccch--Hhhhc--------------chHHHHHhhcCCCCCCCCcHHHHHHHHHH
Confidence 2344568899999999998 356789999 99999 999999543 555 56788888888
Q ss_pred hcCCCCCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 156 RENGPSTGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 156 ~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.++.|..+.+.. ..+.. ....+.+|.. ..|+.+.++.. +...+++ .++|..+|.+|++|+.+|+||||
T Consensus 218 ~lg~p~ed~wps~t~lpd--yk~yp~ypat---tswsqivp~ln-s~grdll-----qkll~cnp~qrisaeaalqhpyf 286 (292)
T KOG0662|consen 218 LLGTPTEDQWPSMTKLPD--YKPYPIYPAT---TSWSQIVPKLN-STGRDLL-----QKLLKCNPAQRISAEAALQHPYF 286 (292)
T ss_pred HhCCCccccCCccccCCC--CcccCCcccc---chHHHHhhhhc-chhHHHH-----HHHhccCcccccCHHHHhcCccc
Confidence 777776553321 11111 1222333333 56999888776 7788999 99999999999999999999999
Q ss_pred ccC
Q psy7309 235 LEG 237 (454)
Q Consensus 235 ~~~ 237 (454)
...
T Consensus 287 ~d~ 289 (292)
T KOG0662|consen 287 SDF 289 (292)
T ss_pred ccc
Confidence 853
No 88
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=2.8e-27 Score=245.95 Aligned_cols=185 Identities=21% Similarity=0.290 Sum_probs=121.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 260 ~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~-----------------------~~~ 316 (461)
T PHA03211 260 AQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS-----------------------WST 316 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccc-----------------------ccc
Confidence 467899999999999999999999999999999999999999999999754210 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch------------hhHHH
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP------------KTLEE 149 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~------------~~~~~ 149 (454)
......+||+.|+|||++. +..++.++ ||||+ ||++||++.+.. ....+
T Consensus 317 ~~~~~~~GT~~Y~APE~~~---~~~~~~~s--DvwSl--------------GviL~El~~g~~~lf~~~~~~~~~~~~~~ 377 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLA---GDPYTPSV--DIWSA--------------GLVIFEAAVHTASLFSASRGDERRPYDAQ 377 (461)
T ss_pred ccccccCCCcCCcCHHHHc---CCCCCchH--HHHHH--------------HHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence 1223467999999999997 66788888 99999 999998643221 12233
Q ss_pred HHHHhhhcCCC---CCCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh
Q psy7309 150 LKHNIRRENGP---STGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS 225 (454)
Q Consensus 150 l~~~i~~~~~p---~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta 225 (454)
+.+.+...... +...........+... .....+. .....|.... ..+....+|| .+||+.||++|||+
T Consensus 378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~dli-----~~mL~~DP~~RPsa 449 (461)
T PHA03211 378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPA-YTRPAWTRYY--KLDLDVEYLV-----CRALTFDGARRPSA 449 (461)
T ss_pred HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCc-cCCcchhhhc--cccchHHHHH-----HHHcccChhhCcCH
Confidence 33333322111 1111111111111100 0000111 1112233221 1235677888 99999999999999
Q ss_pred hhhhcCccccc
Q psy7309 226 EQNLCQPISLE 236 (454)
Q Consensus 226 ~e~l~hp~f~~ 236 (454)
.|+|+||||+.
T Consensus 450 ~elL~hp~f~~ 460 (461)
T PHA03211 450 AELLRLPLFQS 460 (461)
T ss_pred HHHhhCcccCC
Confidence 99999999973
No 89
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.94 E-value=6.4e-27 Score=232.99 Aligned_cols=157 Identities=32% Similarity=0.436 Sum_probs=120.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ...
T Consensus 101 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-------------------------~~~ 155 (323)
T cd05584 101 TACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH-------------------------EGT 155 (323)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc-------------------------CCC
Confidence 5677899999999999999999999999999999999999999999874321 112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......||+.|+|||++. +..++.++ ||||+ ||++|||++|++ |+.
T Consensus 156 ~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~G~~---------------pf~ 201 (323)
T cd05584 156 VTHTFCGTIEYMAPEILM---RSGHGKAV--DWWSL--------------GALMYDMLTGAP---------------PFT 201 (323)
T ss_pred cccccCCCccccChhhcc---CCCCCCcc--eeccc--------------HHHHHHHhcCCC---------------CCC
Confidence 233457999999999998 56678888 99999 999999877654 333
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCcccccC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLEG 237 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~~ 237 (454)
.......+..+... ...+|... ++.+.++| ++||+.||++|| ++++++.||||...
T Consensus 202 ~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~li-----~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 202 AENRKKTIDKILKG-KLNLPPYL-------------TPEARDLL-----KKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCHHHHHHHHHcC-CCCCCCCC-------------CHHHHHHH-----HHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 33333333333322 22333332 26677888 999999999999 89999999999864
No 90
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.94 E-value=4.5e-27 Score=233.98 Aligned_cols=157 Identities=27% Similarity=0.340 Sum_probs=121.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ...
T Consensus 101 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~-------------------------~~~ 155 (323)
T cd05616 101 PHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM-------------------------WDG 155 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecC-------------------------CCC
Confidence 3678899999999999999999999999999999999999999999987431 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+. |+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~elltg~~---------------Pf 201 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIA---YQPYGKSV--DWWAF--------------GVLLYEMLAGQA---------------PF 201 (323)
T ss_pred CccccCCCChhhcCHHHhc---CCCCCCcc--chhch--------------hHHHHHHHhCCC---------------CC
Confidence 2234567999999999998 67788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~ 236 (454)
.+.........+. .....+|... +..+.+++ .+||+.||.+|+++ .++++||||..
T Consensus 202 ~~~~~~~~~~~i~-~~~~~~p~~~-------------s~~~~~li-----~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 202 EGEDEDELFQSIM-EHNVAYPKSM-------------SKEAVAIC-----KGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred CCCCHHHHHHHHH-hCCCCCCCcC-------------CHHHHHHH-----HHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 3333333333333 2223334332 26677888 99999999999985 89999999975
No 91
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=4.1e-27 Score=240.78 Aligned_cols=184 Identities=25% Similarity=0.332 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ...
T Consensus 185 ~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~-----------------------~~~ 241 (392)
T PHA03207 185 EQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH-----------------------PDT 241 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc-----------------------ccc
Confidence 468899999999999999999999999999999999999999999999754321 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh--------hHHHHHHH
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK--------TLEELKHN 153 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~--------~~~~l~~~ 153 (454)
......+||+.|+|||++. ...|+.++ ||||+ ||++|||++|+.+ ....+...
T Consensus 242 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------Gvil~el~~g~~pf~~~~~~~~~~~l~~i 302 (392)
T PHA03207 242 PQCYGWSGTLETNSPELLA---LDPYCAKT--DIWSA--------------GLVLFEMSVKNVTLFGKQVKSSSSQLRSI 302 (392)
T ss_pred ccccccccccCccCHhHhc---CCCCCchh--hHHHH--------------HHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence 2233568999999999998 66788888 99999 9999997654431 12233333
Q ss_pred hhhcCCCC---CCch---hhhhhhhhccCCCC--CCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh
Q psy7309 154 IRRENGPS---TGSN---VQKSLQKFQKSPPS--VYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS 225 (454)
Q Consensus 154 i~~~~~p~---~~~~---~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta 225 (454)
+....... .... ....+..+...... ..|.. +.......++.++| ++||..||.+||||
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li-----~~ml~~dp~~Rpsa 369 (392)
T PHA03207 303 IRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPV--------IRKYGMHMDVEYLI-----AKMLTFDQEFRPSA 369 (392)
T ss_pred HHHhccCccccCCccchhHHHHHHhhcccccCCccccch--------hhccCcchhHHHHH-----HHHhccChhhCCCH
Confidence 32221111 1111 11111111111111 11111 11112235566777 99999999999999
Q ss_pred hhhhcCcccccCCCC
Q psy7309 226 EQNLCQPISLEGSSS 240 (454)
Q Consensus 226 ~e~l~hp~f~~~~~~ 240 (454)
.|+|.||||.+....
T Consensus 370 ~e~l~~p~f~~~~~~ 384 (392)
T PHA03207 370 QDILSLPLFTKEPIN 384 (392)
T ss_pred HHHhhCchhhccchh
Confidence 999999999875543
No 92
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.94 E-value=6.9e-27 Score=232.87 Aligned_cols=167 Identities=26% Similarity=0.374 Sum_probs=124.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ...
T Consensus 97 ~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~-------------------------~~~ 151 (325)
T cd05602 97 RARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-------------------------HNG 151 (325)
T ss_pred HHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc-------------------------CCC
Confidence 5678999999999999999999999999999999999999999999874321 112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
.....+||+.|+|||++. +..|+.++ ||||+ ||++|+|++|.+ |+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~---------------pf~ 197 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLH---KQPYDRTV--DWWCL--------------GAVLYEMLYGLP---------------PFY 197 (325)
T ss_pred CcccccCCccccCHHHHc---CCCCCCcc--ccccc--------------cHHHHHHhcCCC---------------CCC
Confidence 234567999999999998 67788888 99999 999999877654 333
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChh----hhhcCcccccCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSE----QNLCQPISLEGS 238 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~----e~l~hp~f~~~~ 238 (454)
..........+... ...++.. .++.+.++| .+||+.||.+|+++. ++++|+||..
T Consensus 198 ~~~~~~~~~~i~~~-~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~R~~~~~~~~~i~~~~~~~~-- 256 (325)
T cd05602 198 SRNTAEMYDNILNK-PLQLKPN-------------ITNSARHLL-----EGLLQKDRTKRLGAKDDFMEIKNHIFFSP-- 256 (325)
T ss_pred CCCHHHHHHHHHhC-CcCCCCC-------------CCHHHHHHH-----HHHcccCHHHCCCCCCCHHHHhcCcccCC--
Confidence 33333333333222 1222222 226677888 999999999999987 8899999964
Q ss_pred CCCCCccCccccccCCC
Q psy7309 239 SSGLSVLGSEQLLTCDH 255 (454)
Q Consensus 239 ~~~~~~~~~~~ll~~~~ 255 (454)
++|+++.....
T Consensus 257 ------~~~~~~~~~~~ 267 (325)
T cd05602 257 ------INWDDLINKKI 267 (325)
T ss_pred ------CCHHHHHhCCC
Confidence 44555554333
No 93
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.93 E-value=5.6e-27 Score=231.84 Aligned_cols=182 Identities=25% Similarity=0.333 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE----ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI----DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl----~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+......
T Consensus 109 ~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~---------------------- 166 (317)
T cd07867 109 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL---------------------- 166 (317)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCc----------------------
Confidence 478999999999999999999999999999999 456789999999998543210
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh------------
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT------------ 146 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~------------ 146 (454)
.........+||+.|+|||++.. ...++.++ ||||+ ||++|||++|.+..
T Consensus 167 ~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--DiwSl--------------G~il~el~tg~~~f~~~~~~~~~~~~ 228 (317)
T cd07867 167 KPLADLDPVVVTFWYRAPELLLG--ARHYTKAI--DIWAI--------------GCIFAELLTSEPIFHCRQEDIKTSNP 228 (317)
T ss_pred ccccccCcceecccccCcHHhcC--CCccCcHH--HHHhH--------------HHHHHHHHhCCCCccccccccccccc
Confidence 11122345688999999999871 34578888 99999 99999877765522
Q ss_pred --HHHHHHHhhhcCCCCCCchhhhhhh---------hhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhc
Q psy7309 147 --LEELKHNIRRENGPSTGSNVQKSLQ---------KFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCL 215 (454)
Q Consensus 147 --~~~l~~~i~~~~~p~~~~~~~~~~~---------~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L 215 (454)
..++...+...+.|. ...+..... .+.. .....+.. ...........+....+++ .+||
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~ll-----~~~l 298 (317)
T cd07867 229 FHHDQLDRIFSVMGFPA-DKDWEDIRKMPEYPTLQKDFRR-TTYANSSL---IKYMEKHKVKPDSKVFLLL-----QKLL 298 (317)
T ss_pred ccHHHHHHHHHhcCCCC-hhhhhhhhhcccchhhhhhhcc-cccCCchh---hhhhhcccCCCChHHHHHH-----HHHh
Confidence 122222222222221 111111100 0000 00000000 0000000011224455666 9999
Q ss_pred CCCCCCCCChhhhhcCccc
Q psy7309 216 NHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 216 ~~dP~~Rpta~e~l~hp~f 234 (454)
+.||.+|||++|+|+||||
T Consensus 299 ~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 299 TMDPTKRITSEQALQDPYF 317 (317)
T ss_pred ccCcccccCHHHHhcCCCC
Confidence 9999999999999999998
No 94
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.93 E-value=5.7e-27 Score=233.33 Aligned_cols=158 Identities=25% Similarity=0.370 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 101 ~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~-------------------------~~~ 155 (324)
T cd05589 101 PRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM-------------------------GFG 155 (324)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCC-------------------------CCC
Confidence 4678899999999999999999999999999999999999999999986421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ ||||+ ||++|||++|+. |+
T Consensus 156 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~G~~---------------pf 201 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLT---ETSYTRAV--DWWGL--------------GVLIYEMLVGES---------------PF 201 (324)
T ss_pred CcccccccCccccCHhHhc---CCCCCccc--chhhH--------------HHHHHHHHhCCC---------------CC
Confidence 2234568999999999998 66788888 99999 999999776654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
.+.........+... ...+|... ++...++| ++||+.||.+|| ++.++++||||..
T Consensus 202 ~~~~~~~~~~~i~~~-~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 202 PGDDEEEVFDSIVND-EVRYPRFL-------------SREAISIM-----RRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred CCCCHHHHHHHHHhC-CCCCCCCC-------------CHHHHHHH-----HHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 333333333333322 22333332 25566788 999999999999 6899999999975
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 263 ~ 263 (324)
T cd05589 263 I 263 (324)
T ss_pred C
Confidence 3
No 95
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.93 E-value=5.4e-27 Score=233.51 Aligned_cols=158 Identities=28% Similarity=0.346 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 101 ~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~-------------------------~~~ 155 (324)
T cd05587 101 PHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENI-------------------------FGG 155 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecC-------------------------CCC
Confidence 3578899999999999999999999999999999999999999999986321 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ ||||+ ||++|||++|+. |+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~elltG~~---------------pf 201 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIA---YQPYGKSV--DWWAF--------------GVLLYEMLAGQP---------------PF 201 (324)
T ss_pred CceeeecCCccccChhhhc---CCCCCccc--chhhh--------------HHHHHHHHhCCC---------------CC
Confidence 2234567999999999998 66788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~ 236 (454)
.+.........+. .....+|... ++.+.+++ ++||..||.+|+++ +++++||||..
T Consensus 202 ~~~~~~~~~~~i~-~~~~~~~~~~-------------~~~~~~li-----~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 202 DGEDEDELFQSIM-EHNVSYPKSL-------------SKEAVSIC-----KGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred CCCCHHHHHHHHH-cCCCCCCCCC-------------CHHHHHHH-----HHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 3333333333333 2223334332 26667888 99999999999987 89999999975
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 263 ~ 263 (324)
T cd05587 263 I 263 (324)
T ss_pred C
Confidence 3
No 96
>KOG0032|consensus
Probab=99.93 E-value=9.1e-27 Score=235.09 Aligned_cols=162 Identities=28% Similarity=0.390 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC----CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE----DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~----~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.+..+++|++.|++|||+.||+||||||+|+|+... +.+|++|||+|....
T Consensus 136 da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~------------------------- 190 (382)
T KOG0032|consen 136 DAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK------------------------- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc-------------------------
Confidence 578899999999999999999999999999999754 369999999998653
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
........+||+.|+|||++. ...|+..+ ||||+ |+++|.|+.|.+
T Consensus 191 -~~~~~~~~~Gtp~y~APEvl~---~~~y~~~~--DiWS~--------------Gvi~yiLL~G~~-------------- 236 (382)
T KOG0032|consen 191 -PGERLHTIVGTPEYVAPEVLG---GRPYGDEV--DVWSI--------------GVILYILLSGVP-------------- 236 (382)
T ss_pred -CCceEeeecCCccccCchhhc---CCCCCccc--chhHH--------------HHHHHHHhhCCC--------------
Confidence 244567789999999999998 68999999 99999 999998765543
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
||.+.........+... ...++.. .|.. .+..+++++ +.||..||.+|+||.++|+|||+....
T Consensus 237 -PF~~~~~~~~~~~i~~~-~~~f~~~----~w~~-----is~~akd~i-----~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 237 -PFWGETEFEIFLAILRG-DFDFTSE----PWDD-----ISESAKDFI-----RKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred -CCcCCChhHHHHHHHcC-CCCCCCC----Cccc-----cCHHHHHHH-----HHhcccCcccCCCHHHHhcCccccCCc
Confidence 55555544444444433 2333332 3543 357888999 999999999999999999999998764
Q ss_pred C
Q psy7309 239 S 239 (454)
Q Consensus 239 ~ 239 (454)
.
T Consensus 301 ~ 301 (382)
T KOG0032|consen 301 E 301 (382)
T ss_pred c
Confidence 3
No 97
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.93 E-value=6e-27 Score=232.52 Aligned_cols=158 Identities=28% Similarity=0.412 Sum_probs=120.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..... ..
T Consensus 96 ~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~-------------------------~~ 150 (316)
T cd05592 96 ARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN-------------------------GE 150 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCC-------------------------CC
Confidence 35788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+. |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~ell~G~~---------------Pf 196 (316)
T cd05592 151 GKASTFCGTPDYIAPEILK---GQKYNESV--DWWSF--------------GVLLYEMLIGQS---------------PF 196 (316)
T ss_pred CccccccCCccccCHHHHc---CCCCCCcc--cchhH--------------HHHHHHHHhCCC---------------CC
Confidence 2334568999999999998 66788888 99999 999999776653 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-hhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-EQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-~e~l~hp~f~~~ 237 (454)
.+.+.......+. ...+.+|... +....++| .+||+.||++||++ .+++.||||...
T Consensus 197 ~~~~~~~~~~~i~-~~~~~~~~~~-------------~~~~~~ll-----~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 197 HGEDEDELFDSIL-NDRPHFPRWI-------------SKEAKDCL-----SKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCCCHHHHHHHHH-cCCCCCCCCC-------------CHHHHHHH-----HHHccCCHHHcCCChHHHHcCcccCCC
Confidence 3333333333332 2223333332 25667888 99999999999986 588899999753
No 98
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.93 E-value=7.5e-27 Score=233.15 Aligned_cols=166 Identities=25% Similarity=0.291 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++... ...
T Consensus 96 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~-------------------------~~~ 150 (329)
T cd05588 96 EHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI-------------------------RPG 150 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccc-------------------------cCC
Confidence 4678899999999999999999999999999999999999999999987421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ |+||+ ||++|++++|+.+.... .....|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~~l~el~~g~~Pf~~~-----~~~~~~- 205 (329)
T cd05588 151 DTTSTFCGTPNYIAPEILR---GEDYGFSV--DWWAL--------------GVLMFEMMAGRSPFDIV-----GMSDNP- 205 (329)
T ss_pred CccccccCCccccCHHHHc---CCCCCCcc--ceech--------------HHHHHHHHHCCCCcccc-----cccccc-
Confidence 2233468999999999998 67788888 99999 99999977765432100 000000
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC------hhhhhcCcccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS------SEQNLCQPISL 235 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt------a~e~l~hp~f~ 235 (454)
..................+|... +..+.++| ++||+.||.+|+| ++|+++||||.
T Consensus 206 -~~~~~~~~~~~~~~~~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 206 -DQNTEDYLFQVILEKQIRIPRSL-------------SVKASSVL-----KGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred -cccchHHHHHHHHcCCCCCCCCC-------------CHHHHHHH-----HHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 11111111111112333344332 26677888 9999999999997 68999999996
Q ss_pred c
Q psy7309 236 E 236 (454)
Q Consensus 236 ~ 236 (454)
.
T Consensus 267 ~ 267 (329)
T cd05588 267 N 267 (329)
T ss_pred C
Confidence 4
No 99
>KOG0983|consensus
Probab=99.93 E-value=1.7e-26 Score=213.97 Aligned_cols=159 Identities=28% Similarity=0.417 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 5 WRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 5 ~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
-++...++.||.||.+ +||||||+||+|||+|..|++||||||.+..+.+ ...
T Consensus 194 Gk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd--------------------------SkA 247 (391)
T KOG0983|consen 194 GKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--------------------------SKA 247 (391)
T ss_pred hhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec--------------------------ccc
Confidence 3567788999999985 6999999999999999999999999999987643 345
Q ss_pred CcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCC
Q psy7309 84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTG 163 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~ 163 (454)
++...|.+.|||||-+--.....|+-.+ ||||| |++++|+.+|+. |+.+
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRa--DVWSl--------------GITlveLaTg~y---------------Py~~ 296 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRA--DVWSL--------------GITLVELATGQY---------------PYKG 296 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhh--hhhhh--------------ccchhhhhcccC---------------CCCC
Confidence 6667899999999999755577899898 99999 999999988764 3333
Q ss_pred c-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 164 S-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 164 ~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
. ...+.+-++.+..++.+|.... .++...+|+ ..||.+|+.+||...++|+|||...
T Consensus 297 c~tdFe~ltkvln~ePP~L~~~~g-----------FSp~F~~fv-----~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 297 CKTDFEVLTKVLNEEPPLLPGHMG-----------FSPDFQSFV-----KDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred CCccHHHHHHHHhcCCCCCCcccC-----------cCHHHHHHH-----HHHhhcCcccCcchHHHhcCcceee
Confidence 2 2334445555566666666532 237777888 9999999999999999999999874
No 100
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.93 E-value=1.4e-26 Score=230.70 Aligned_cols=158 Identities=28% Similarity=0.362 Sum_probs=119.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 96 ~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~-------------------------~~~ 150 (325)
T cd05604 96 PRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGI-------------------------AQS 150 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCC-------------------------CCC
Confidence 3578899999999999999999999999999999999999999999987421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|.+ |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~el~~G~~---------------pf 196 (325)
T cd05604 151 DTTTTFCGTPEYLAPEVIR---KQPYDNTV--DWWCL--------------GAVLYEMLYGLP---------------PF 196 (325)
T ss_pred CCcccccCChhhCCHHHHc---CCCCCCcC--ccccc--------------cceehhhhcCCC---------------CC
Confidence 2234568999999999998 67788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChh----hhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSE----QNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~----e~l~hp~f~~~ 237 (454)
...........+.... ..++.. .+....++| ++||+.||.+||++. ++++||||...
T Consensus 197 ~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~ll-----~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 197 YCRDVAEMYDNILHKP-LVLRPG-------------ASLTAWSIL-----EELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCHHHHHHHHHcCC-ccCCCC-------------CCHHHHHHH-----HHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 3333333333333221 122211 125566788 999999999999874 89999999753
No 101
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.93 E-value=8.6e-27 Score=232.76 Aligned_cols=165 Identities=25% Similarity=0.289 Sum_probs=118.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 96 ~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~-------------------------~~ 150 (329)
T cd05618 96 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-------------------------PG 150 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC-------------------------CC
Confidence 35788999999999999999999999999999999999999999999874311 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ ||||+ ||++|||++|+.+.... . ....
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~Pf~~~-----~--~~~~ 204 (329)
T cd05618 151 DTTSTFCGTPNYIAPEILR---GEDYGFSV--DWWAL--------------GVLMFEMMAGRSPFDIV-----G--SSDN 204 (329)
T ss_pred CccccccCCccccCHHHHc---CCCCCCcc--ceecc--------------cHHHHHHhhCCCCCccC-----C--CcCC
Confidence 2234468999999999998 67788888 99999 99999987765432100 0 0000
Q ss_pred CCchhhh-hhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh------hhhhcCccc
Q psy7309 162 TGSNVQK-SLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS------EQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta------~e~l~hp~f 234 (454)
....... ....+. .....+|... +..+.++| ++||+.||++|||+ +++++||||
T Consensus 205 ~~~~~~~~~~~~i~-~~~~~~p~~~-------------~~~~~~ll-----~~~L~~dP~~R~~~~~~~~~~~i~~hp~f 265 (329)
T cd05618 205 PDQNTEDYLFQVIL-EKQIRIPRSL-------------SVKAASVL-----KSFLNKDPKERLGCHPQTGFADIQGHPFF 265 (329)
T ss_pred cccccHHHHHHHHh-cCCCCCCCCC-------------CHHHHHHH-----HHHhcCCHHHcCCCCCCCCHHHHhcCCCC
Confidence 0011111 111121 2333344332 25667888 99999999999995 799999999
Q ss_pred cc
Q psy7309 235 LE 236 (454)
Q Consensus 235 ~~ 236 (454)
..
T Consensus 266 ~~ 267 (329)
T cd05618 266 RN 267 (329)
T ss_pred CC
Confidence 75
No 102
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.93 E-value=1.7e-26 Score=229.51 Aligned_cols=157 Identities=25% Similarity=0.335 Sum_probs=119.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 96 ~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~-------------------------~~ 150 (321)
T cd05603 96 PRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE-------------------------PE 150 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC-------------------------CC
Confidence 35788999999999999999999999999999999999999999999874211 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|.+ |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~---------------pf 196 (321)
T cd05603 151 ETTSTFCGTPEYLAPEVLR---KEPYDRTV--DWWCL--------------GAVLYEMLYGLP---------------PF 196 (321)
T ss_pred CccccccCCcccCCHHHhc---CCCCCCcC--ccccc--------------chhhhhhhcCCC---------------CC
Confidence 2234467999999999987 66788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChh----hhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSE----QNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~----e~l~hp~f~~ 236 (454)
...+.......+.. ....+|.. .+....++| .+||+.||.+|+++. |+++|+||..
T Consensus 197 ~~~~~~~~~~~i~~-~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 197 YSRDVSQMYDNILH-KPLQLPGG-------------KTVAACDLL-----VGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred CCCCHHHHHHHHhc-CCCCCCCC-------------CCHHHHHHH-----HHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 33333333333332 22233322 125667788 999999999999864 9999999974
No 103
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=6.7e-27 Score=246.41 Aligned_cols=184 Identities=20% Similarity=0.253 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++++++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.+.. ....
T Consensus 268 ~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~------------------------~~~~ 323 (501)
T PHA03210 268 QTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEK------------------------EREA 323 (501)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCc------------------------cccc
Confidence 5678999999999999999999999999999999999999999999975531 1112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch--------hhHHHHHHHh
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP--------KTLEELKHNI 154 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~--------~~~~~l~~~i 154 (454)
.....+||+.|+|||++. +..|+.++ ||||+ ||++|||+++.. ....++...+
T Consensus 324 ~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~ell~~~~~p~~~~~~~~~~~~~~~~ 384 (501)
T PHA03210 324 FDYGWVGTVATNSPEILA---GDGYCEIT--DIWSC--------------GLILLDMLSHDFCPIGDGGGKPGKQLLKII 384 (501)
T ss_pred ccccccCCcCCCCchhhc---CCCCCcHH--HHHHH--------------HHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence 233468999999999998 66788888 99999 999999765432 2233343333
Q ss_pred hhcCCCCCCc--hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 155 RRENGPSTGS--NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 155 ~~~~~p~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
.....+.... ...+.+..+........+...+ +.+..........++| .+||++||++||||.|+|.||
T Consensus 385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~li-----~kmL~~DP~~Rpsa~elL~hp 455 (501)
T PHA03210 385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVP----PLIRNLGLPADFEYPL-----VKMLTFDWHLRPGAAELLALP 455 (501)
T ss_pred HhcccChhhcCCcHHHHHHHhhhhhcccCccchh----hHHHhcCCChHHHHHH-----HHHhccCcccCcCHHHHhhCh
Confidence 3222111110 0011111111100000011100 0001111224556667 999999999999999999999
Q ss_pred ccccCC
Q psy7309 233 ISLEGS 238 (454)
Q Consensus 233 ~f~~~~ 238 (454)
||....
T Consensus 456 ~f~~~~ 461 (501)
T PHA03210 456 LFSAEE 461 (501)
T ss_pred hhhcCC
Confidence 998643
No 104
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.93 E-value=6.3e-27 Score=232.50 Aligned_cols=158 Identities=30% Similarity=0.436 Sum_probs=120.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 96 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~-------------------------~~~ 150 (318)
T cd05570 96 PRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGI-------------------------LGG 150 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecC-------------------------cCC
Confidence 4678899999999999999999999999999999999999999999986421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ |+||+ ||++|+|++|.. |+
T Consensus 151 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~~l~~G~~---------------pf 196 (318)
T cd05570 151 VTTSTFCGTPDYIAPEILS---YQPYGPAV--DWWAL--------------GVLLYEMLAGQS---------------PF 196 (318)
T ss_pred CcccceecCccccCHHHhc---CCCCCcch--hhhhH--------------HHHHHHHhhCCC---------------CC
Confidence 2233457999999999998 67788888 99999 999999777654 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~ 236 (454)
...........+. .....+|... +....++| ++||+.||++|||+ .+++.||||..
T Consensus 197 ~~~~~~~~~~~i~-~~~~~~~~~~-------------~~~~~~li-----~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 197 EGDDEDELFQSIL-EDEVRYPRWL-------------SKEAKSIL-----KSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred CCCCHHHHHHHHH-cCCCCCCCcC-------------CHHHHHHH-----HHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 2222222222222 2222333322 26667888 99999999999999 99999999976
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 258 ~ 258 (318)
T cd05570 258 I 258 (318)
T ss_pred C
Confidence 3
No 105
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.93 E-value=7.8e-27 Score=227.40 Aligned_cols=157 Identities=29% Similarity=0.409 Sum_probs=117.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++..... ..
T Consensus 97 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~-------------------------~~ 151 (280)
T cd05608 97 PRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD-------------------------GQ 151 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCC-------------------------CC
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||++. +..++.++ |+||+ ||++||+++|+.+ +
T Consensus 152 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~el~~g~~p---------------f 197 (280)
T cd05608 152 SKTKGYAGTPGFMAPELLQ---GEEYDFSV--DYFAL--------------GVTLYEMIAARGP---------------F 197 (280)
T ss_pred ccccccCCCcCccCHHHhc---CCCCCccc--cHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1233457899999999998 66788888 99999 9999997766532 1
Q ss_pred CCch----hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCc
Q psy7309 162 TGSN----VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQP 232 (454)
Q Consensus 162 ~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp 232 (454)
.... ......... .....++.. .++...+++ .+||+.||++|| |++++++||
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~l~~~P~~R~~~~~~~~~~~l~h~ 258 (280)
T cd05608 198 RARGEKVENKELKQRIL-NDSVTYPDK-------------FSPASKSFC-----EALLAKDPEKRLGFRDGNCDGLRTHP 258 (280)
T ss_pred CCCCcchhHHHHHHhhc-ccCCCCccc-------------CCHHHHHHH-----HHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence 1110 011111111 112222222 236677888 999999999999 889999999
Q ss_pred cccc
Q psy7309 233 ISLE 236 (454)
Q Consensus 233 ~f~~ 236 (454)
||+.
T Consensus 259 ~~~~ 262 (280)
T cd05608 259 LFRD 262 (280)
T ss_pred hhhc
Confidence 9985
No 106
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.93 E-value=6.8e-27 Score=232.21 Aligned_cols=158 Identities=29% Similarity=0.417 Sum_probs=120.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.... ...
T Consensus 96 ~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~-------------------------~~~ 150 (316)
T cd05619 96 PRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENM-------------------------LGD 150 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECC-------------------------CCC
Confidence 4678899999999999999999999999999999999999999999987421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ |+||+ ||++|||++|.. |+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~el~~G~~---------------pf 196 (316)
T cd05619 151 AKTCTFCGTPDYIAPEILL---GQKYNTSV--DWWSF--------------GVLLYEMLIGQS---------------PF 196 (316)
T ss_pred CceeeecCCccccCHHHHc---CCCCCchh--hhhhH--------------HHHHHHHHhCCC---------------CC
Confidence 2233467999999999987 66788888 99999 999999877653 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChh-hhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSE-QNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~-e~l~hp~f~~~ 237 (454)
...........+.. ....+|... +....+++ .+||+.||++||++. ++++||||...
T Consensus 197 ~~~~~~~~~~~i~~-~~~~~~~~~-------------~~~~~~li-----~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 197 HGHDEEELFQSIRM-DNPCYPRWL-------------TREAKDIL-----VKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CCCCHHHHHHHHHh-CCCCCCccC-------------CHHHHHHH-----HHHhccCHhhcCCChHHHHcCcccCCC
Confidence 33333333333321 222333332 25667888 999999999999996 89999999863
No 107
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.93 E-value=2.2e-26 Score=228.41 Aligned_cols=157 Identities=28% Similarity=0.407 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 98 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~-------------------------~~ 152 (318)
T cd05582 98 EDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-------------------------HE 152 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCC-------------------------CC
Confidence 46789999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||++. +..++.++ ||||+ ||++|||++|+. |+
T Consensus 153 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~tg~~---------------p~ 198 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVN---RRGHTQSA--DWWSF--------------GVLMFEMLTGSL---------------PF 198 (318)
T ss_pred CceecccCChhhcCHHHHc---CCCCCCcc--ceecc--------------ceEeeeeccCCC---------------CC
Confidence 2234568999999999987 56678888 99999 999999887654 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~ 236 (454)
...........+. .....+|... ++...++| ++||+.||.+||| +++++.||||..
T Consensus 199 ~~~~~~~~~~~i~-~~~~~~p~~~-------------~~~~~~li-----~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 199 QGKDRKETMTMIL-KAKLGMPQFL-------------SPEAQSLL-----RALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred CCCCHHHHHHHHH-cCCCCCCCCC-------------CHHHHHHH-----HHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 2222222222222 1222333322 26677888 9999999999999 566999999985
No 108
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.93 E-value=2.2e-26 Score=232.57 Aligned_cols=184 Identities=27% Similarity=0.369 Sum_probs=121.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCcccccc-----CccCCCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELT-----GYILPPIDSTA 76 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 76 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++................ +..........
T Consensus 101 ~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (360)
T cd05627 101 EATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKR 180 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccccccccccccc
Confidence 3578899999999999999999999999999999999999999999987543211100000000 00000000000
Q ss_pred -----cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHH
Q psy7309 77 -----FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELK 151 (454)
Q Consensus 77 -----~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~ 151 (454)
...........+||+.|+|||++. +..|+.++ ||||+ ||++|||++|.+
T Consensus 181 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~~--DiwSl--------------Gvilyel~tG~~------- 234 (360)
T cd05627 181 KAETWKKNRRQLAYSTVGTPDYIAPEVFM---QTGYNKLC--DWWSL--------------GVIMYEMLIGYP------- 234 (360)
T ss_pred ccccccccccccccccCCCccccCHHHHc---CCCCCCcc--eeccc--------------cceeeecccCCC-------
Confidence 000111223568999999999998 67788888 99999 999999887764
Q ss_pred HHhhhcCCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC---hhh
Q psy7309 152 HNIRRENGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS---SEQ 227 (454)
Q Consensus 152 ~~i~~~~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt---a~e 227 (454)
|+.+........++.. .....+|... ..++.+.++| .+|+ .||.+|++ ++|
T Consensus 235 --------Pf~~~~~~~~~~~i~~~~~~~~~p~~~-----------~~s~~~~~li-----~~l~-~~p~~R~~~~~~~e 289 (360)
T cd05627 235 --------PFCSETPQETYRKVMNWKETLVFPPEV-----------PISEKAKDLI-----LRFC-TDSENRIGSNGVEE 289 (360)
T ss_pred --------CCCCCCHHHHHHHHHcCCCceecCCCC-----------CCCHHHHHHH-----HHhc-cChhhcCCCCCHHH
Confidence 3333333333333221 1222333321 1236778888 8877 49999995 799
Q ss_pred hhcCccccc
Q psy7309 228 NLCQPISLE 236 (454)
Q Consensus 228 ~l~hp~f~~ 236 (454)
+++||||..
T Consensus 290 i~~hp~f~~ 298 (360)
T cd05627 290 IKSHPFFEG 298 (360)
T ss_pred HhcCCCCCC
Confidence 999999985
No 109
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.93 E-value=1.2e-26 Score=231.41 Aligned_cols=164 Identities=24% Similarity=0.301 Sum_probs=119.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ...
T Consensus 96 ~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~-------------------------~~~ 150 (327)
T cd05617 96 EHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL-------------------------GPG 150 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceecc-------------------------CCC
Confidence 4678899999999999999999999999999999999999999999987421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+.+.... ...
T Consensus 151 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~ell~g~~pf~~~---------~~~ 202 (327)
T cd05617 151 DTTSTFCGTPNYIAPEILR---GEEYGFSV--DWWAL--------------GVLMFEMMAGRSPFDII---------TDN 202 (327)
T ss_pred CceecccCCcccCCHHHHC---CCCCCchh--eeehh--------------HHHHHHHHhCCCCCCcc---------CCC
Confidence 2233468999999999998 67788888 99999 99999977765422100 000
Q ss_pred CCchhhh-hhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh------hhhhcCccc
Q psy7309 162 TGSNVQK-SLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS------EQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta------~e~l~hp~f 234 (454)
....... ....+. .....+|... +..+.+++ ++||+.||++|+++ ++++.||||
T Consensus 203 ~~~~~~~~~~~~~~-~~~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~~~~~~i~~h~~f 263 (327)
T cd05617 203 PDMNTEDYLFQVIL-EKPIRIPRFL-------------SVKASHVL-----KGFLNKDPKERLGCQPQTGFSDIKSHTFF 263 (327)
T ss_pred cccccHHHHHHHHH-hCCCCCCCCC-------------CHHHHHHH-----HHHhccCHHHcCCCCCCCCHHHHHcCCCC
Confidence 0011111 112222 2333344332 25667888 99999999999985 699999999
Q ss_pred ccC
Q psy7309 235 LEG 237 (454)
Q Consensus 235 ~~~ 237 (454)
...
T Consensus 264 ~~~ 266 (327)
T cd05617 264 RSI 266 (327)
T ss_pred CCC
Confidence 853
No 110
>KOG0603|consensus
Probab=99.93 E-value=1.1e-26 Score=237.26 Aligned_cols=150 Identities=25% Similarity=0.362 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE-ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI-DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl-~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++..|++||+.|+.|||++|++||||||+|||+ +..++++|+|||.++....
T Consensus 416 e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~--------------------------- 468 (612)
T KOG0603|consen 416 EASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER--------------------------- 468 (612)
T ss_pred HHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCch---------------------------
Confidence 466799999999999999999999999999999 6889999999999986532
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
...+.+-|..|.|||++. ...|+..+ |+||| |+++|+|++|+...
T Consensus 469 -~~~tp~~t~~y~APEvl~---~~~yt~ac--D~WSL--------------GvlLy~ML~G~tp~--------------- 513 (612)
T KOG0603|consen 469 -SCDTPALTLQYVAPEVLA---IQEYTEAC--DWWSL--------------GVLLYEMLTGRTLF--------------- 513 (612)
T ss_pred -hhcccchhhcccChhhhc---cCCCCcch--hhHHH--------------HHHHHHHHhCCCcc---------------
Confidence 134457789999999998 78999999 99999 77777766655411
Q ss_pred CCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 162 TGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 162 ~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
...+.. .+..++. ...+. ...+..+++|| .+||+.||.+|+|+.|++.||||.
T Consensus 514 ~~~P~~~ei~~~i~---~~~~s-------------~~vS~~AKdLl-----~~LL~~dP~~Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 514 AAHPAGIEIHTRIQ---MPKFS-------------ECVSDEAKDLL-----QQLLQVDPALRLGADEIGAHPWFL 567 (612)
T ss_pred ccCCchHHHHHhhc---CCccc-------------cccCHHHHHHH-----HHhccCChhhCcChhhhccCcchh
Confidence 111110 1111111 11111 23458899999 999999999999999999999993
No 111
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.93 E-value=3.1e-26 Score=228.44 Aligned_cols=164 Identities=26% Similarity=0.319 Sum_probs=119.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+.. ...
T Consensus 102 ~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~------------------------~~~ 157 (330)
T cd05601 102 DMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA------------------------NKM 157 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC------------------------CCc
Confidence 35778999999999999999999999999999999999999999999975421 111
Q ss_pred CCCcCcccccceecccccccc---ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 82 TSHTGQVGTALYAAPELDSHG---VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~---~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
......+||+.|+|||++... ....++.++ ||||+ ||++|||++|..
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--Diwsl--------------G~il~el~~g~~-------------- 207 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVEC--DWWSL--------------GVIAYEMIYGRS-------------- 207 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcc--eeecc--------------cceeeeeccCCC--------------
Confidence 122345799999999998621 134567778 99999 999999887654
Q ss_pred CCCCCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 159 GPSTGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
|+........+.++... ....+|... ..++...+|| .+||. ||++|||++++++||||...
T Consensus 208 -Pf~~~~~~~~~~~i~~~~~~~~~~~~~-----------~~~~~~~~li-----~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 208 -PFHEGTSAKTYNNIMNFQRFLKFPEDP-----------KVSSDFLDLI-----QSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred -CCCCCCHHHHHHHHHcCCCccCCCCCC-----------CCCHHHHHHH-----HHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 23222222222222211 112233221 1236677888 99997 99999999999999999863
No 112
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.93 E-value=3.2e-26 Score=228.75 Aligned_cols=162 Identities=29% Similarity=0.369 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 101 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~---------------------------- 152 (333)
T cd05600 101 DHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV---------------------------- 152 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccc----------------------------
Confidence 3578899999999999999999999999999999999999999999987432
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ ||||+ ||++|||++|.+ |+
T Consensus 153 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~ell~g~~---------------pf 198 (333)
T cd05600 153 TYANSVVGSPDYMAPEVLR---GKGYDFTV--DYWSL--------------GCMLYEFLCGFP---------------PF 198 (333)
T ss_pred cccCCcccCccccChhHhc---CCCCCCcc--ceecc--------------hHHHhhhhhCCC---------------CC
Confidence 1234568999999999998 56788888 99999 999999877654 22
Q ss_pred CCchhhhhhhhhccCC-CCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSP-PSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
...+.......+.... ....|.... .. ...++.+.++| .+||..+|.+|||++|+++||||...
T Consensus 199 ~~~~~~~~~~~i~~~~~~~~~~~~~~------~~-~~~s~~~~~li-----~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 199 SGSTPNETWENLKYWKETLQRPVYDD------PR-FNLSDEAWDLI-----TKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred CCCCHHHHHHHHHhccccccCCCCCc------cc-cccCHHHHHHH-----HHHhhChhhhcCCHHHHHhCcccCCC
Confidence 2222222222221110 011111100 00 11236677888 99999999999999999999999853
No 113
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.93 E-value=1.2e-26 Score=235.47 Aligned_cols=184 Identities=27% Similarity=0.340 Sum_probs=123.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+.... ...
T Consensus 103 ~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~------------------------~~~ 158 (372)
T cd07853 103 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP------------------------DES 158 (372)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeeccc------------------------Ccc
Confidence 45889999999999999999999999999999999999999999999875321 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
...+..++|+.|+|||++.. ...|+.++ ||||+ ||++|||++|++. ....+..+...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~el~~g~~pf~~~~~~~~~~~i~~~ 220 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMG--SRHYTSAV--DIWSV--------------GCIFAELLGRRILFQAQSPIQQLDLITDL 220 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcC--CCCCCcHH--HHHhH--------------HHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 22344578999999999871 24577788 99999 9999998776642 22333333332
Q ss_pred cCCCCCCchhhhh----hhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 157 ENGPSTGSNVQKS----LQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 157 ~~~p~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
.+.|... ..... ...+. ......+.....+. .....++.+.+|| .+||+.||++|||+.|+|+||
T Consensus 221 ~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~li-----~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 221 LGTPSLE-AMRSACEGARAHIL-RGPHKPPSLPVLYT----LSSQATHEAVHLL-----CRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred cCCCCHH-HHHHhhHHHHHHHH-hCCCCCCchHHhcc----cCCCCCHHHHHHH-----HHhCCCChhhCcCHHHHhcCH
Confidence 3333221 11110 11111 11111111100000 0112246667788 999999999999999999999
Q ss_pred ccccCC
Q psy7309 233 ISLEGS 238 (454)
Q Consensus 233 ~f~~~~ 238 (454)
||....
T Consensus 290 ~~~~~~ 295 (372)
T cd07853 290 YLDEGR 295 (372)
T ss_pred hhCCCc
Confidence 998753
No 114
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=4.1e-26 Score=242.73 Aligned_cols=180 Identities=21% Similarity=0.264 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+|+.+.. ....
T Consensus 257 i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~------------------------~~~~ 312 (566)
T PLN03225 257 IQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRV------------------------GINY 312 (566)
T ss_pred HHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccc------------------------cccc
Confidence 6789999999999999999999999999999986 57899999999975421 1112
Q ss_pred CCcCcccccceecccccccccc-------------------ccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCc
Q psy7309 83 SHTGQVGTALYAAPELDSHGVK-------------------AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDR 143 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~-------------------~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~ 143 (454)
.....+||+.|+|||.+..... ..++.++ ||||+ ||++|||+.+.
T Consensus 313 ~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~--DVwSl--------------GviL~el~~~~ 376 (566)
T PLN03225 313 IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF--DIYSA--------------GLIFLQMAFPN 376 (566)
T ss_pred CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc--ccHHH--------------HHHHHHHHhCc
Confidence 2345688999999997541111 1244556 99999 99999965433
Q ss_pred hh---hHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCC
Q psy7309 144 PK---TLEELKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPS 220 (454)
Q Consensus 144 ~~---~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~ 220 (454)
.. ....+...+..... ........+........... +. .+ ........+|| .+||+.||+
T Consensus 377 ~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~--~~--d~~~~~~~dLi-----~~mL~~dP~ 439 (566)
T PLN03225 377 LRSDSNLIQFNRQLKRNDY-----DLVAWRKLVEPRASPDLRRG---FE--VL--DLDGGAGWELL-----KSMMRFKGR 439 (566)
T ss_pred CCCchHHHHHHHHHHhcCC-----cHHHHHHhhccccchhhhhh---hh--hc--cccchHHHHHH-----HHHccCCcc
Confidence 21 12222222221111 11111111110100000111 00 00 11123345777 999999999
Q ss_pred CCCChhhhhcCcccccCCCC
Q psy7309 221 KRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 221 ~Rpta~e~l~hp~f~~~~~~ 240 (454)
+|||++|+|+||||......
T Consensus 440 kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 440 QRISAKAALAHPYFDREGLL 459 (566)
T ss_pred cCCCHHHHhCCcCcCCCCcc
Confidence 99999999999999876554
No 115
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.93 E-value=2.5e-26 Score=230.64 Aligned_cols=184 Identities=24% Similarity=0.296 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCc--cCCCCCC--CCc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGY--ILPPIDS--TAF 77 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~ 77 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.................. ..+.... ...
T Consensus 101 ~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (350)
T cd05573 101 ETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDH 180 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccccccc
Confidence 467889999999999999999999999999999999999999999999865322100000000000 0000000 000
Q ss_pred ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309 78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE 157 (454)
Q Consensus 78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~ 157 (454)
..........+||+.|+|||++. +..++.++ ||||+ ||++|||++|+.
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~ell~g~~------------- 228 (350)
T cd05573 181 KQRRVRANSTVGTPDYIAPEVLR---GTPYGLEC--DWWSL--------------GVILYEMLYGFP------------- 228 (350)
T ss_pred ccccccccccccCccccCHHHHc---CCCCCCce--eeEec--------------chhhhhhccCCC-------------
Confidence 01112334568999999999998 56788888 99999 999999887654
Q ss_pred CCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-hhhhhcCcccc
Q psy7309 158 NGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-SEQNLCQPISL 235 (454)
Q Consensus 158 ~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-a~e~l~hp~f~ 235 (454)
|+..........++.. .....+|... ..++...++| .+||. ||.+||+ ++|+++||||.
T Consensus 229 --Pf~~~~~~~~~~~i~~~~~~~~~p~~~-----------~~~~~~~~li-----~~ll~-dp~~R~~s~~~ll~hp~~~ 289 (350)
T cd05573 229 --PFYSDTLQETYNKIINWKESLRFPPDP-----------PVSPEAIDLI-----CRLLC-DPEDRLGSFEEIKSHPFFK 289 (350)
T ss_pred --CCCCCCHHHHHHHHhccCCcccCCCCC-----------CCCHHHHHHH-----HHHcc-ChhhcCCCHHHHhcCCCcC
Confidence 2322222222222221 1222233321 1236677888 99997 9999999 99999999997
Q ss_pred c
Q psy7309 236 E 236 (454)
Q Consensus 236 ~ 236 (454)
.
T Consensus 290 ~ 290 (350)
T cd05573 290 G 290 (350)
T ss_pred C
Confidence 5
No 116
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.93 E-value=2.2e-26 Score=232.91 Aligned_cols=185 Identities=25% Similarity=0.332 Sum_probs=120.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCC-----C--
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPID-----S-- 74 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~-----~-- 74 (454)
..++.++.|++.||+|||++||+||||||+|||++.++++||+|||+|+...................+... .
T Consensus 101 ~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (363)
T cd05628 101 EETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKR 180 (363)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccccccccccccc
Confidence 467889999999999999999999999999999999999999999999754321100000000000000000 0
Q ss_pred ---CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHH
Q psy7309 75 ---TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELK 151 (454)
Q Consensus 75 ---~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~ 151 (454)
.............+||+.|+|||++. +..|+.++ ||||+ ||++|||++|.+
T Consensus 181 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~~~~~--DvwSl--------------Gvil~ell~G~~------- 234 (363)
T cd05628 181 KAETWKRNRRQLAFSTVGTPDYIAPEVFM---QTGYNKLC--DWWSL--------------GVIMYEMLIGYP------- 234 (363)
T ss_pred ccchhhhccccccccccCCccccCHHHHc---CCCCCCch--hhhhh--------------HHHHHHHHhCCC-------
Confidence 00000111234568999999999998 67788888 99999 999999877654
Q ss_pred HHhhhcCCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCC---CCCChhh
Q psy7309 152 HNIRRENGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPS---KRPSSEQ 227 (454)
Q Consensus 152 ~~i~~~~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~---~Rpta~e 227 (454)
|+.+........++.. .....+|...+ .++.+.++| .+|+. +|. .||+++|
T Consensus 235 --------Pf~~~~~~~~~~~i~~~~~~~~~p~~~~-----------~s~~~~~li-----~~l~~-~~~~r~~r~~~~e 289 (363)
T cd05628 235 --------PFCSETPQETYKKVMNWKETLIFPPEVP-----------ISEKAKDLI-----LRFCC-EWEHRIGAPGVEE 289 (363)
T ss_pred --------CCCCCCHHHHHHHHHcCcCcccCCCcCC-----------CCHHHHHHH-----HHHcC-ChhhcCCCCCHHH
Confidence 3433333333333332 12333443321 236777888 77664 444 4689999
Q ss_pred hhcCcccccC
Q psy7309 228 NLCQPISLEG 237 (454)
Q Consensus 228 ~l~hp~f~~~ 237 (454)
+++||||...
T Consensus 290 i~~hp~f~~~ 299 (363)
T cd05628 290 IKTNPFFEGV 299 (363)
T ss_pred HhCCCCCCCC
Confidence 9999999853
No 117
>KOG0589|consensus
Probab=99.93 E-value=1.5e-26 Score=231.62 Aligned_cols=158 Identities=30% Similarity=0.420 Sum_probs=129.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+++++|+-|++.|++|||+++|+|||||+.|||++.++.|||+|||+|+.+.. ..
T Consensus 106 ~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~-------------------------~~ 160 (426)
T KOG0589|consen 106 ERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP-------------------------ED 160 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCC-------------------------ch
Confidence 36899999999999999999999999999999999999999999999997642 22
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....+.+||+.||+||++. +.+|+.+. ||||| ||++|||+.-+ .+|
T Consensus 161 ~~a~tvvGTp~YmcPEil~---d~pYn~KS--DiWsL--------------GC~~yEm~~lk---------------~aF 206 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILS---DIPYNEKS--DIWSL--------------GCCLYEMCTLK---------------PAF 206 (426)
T ss_pred hhhheecCCCcccCHHHhC---CCCCCccC--cchhh--------------cchHHHHHhcc---------------ccc
Confidence 3556789999999999999 89999999 99999 99999976532 344
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
.+.+......++......++|.. .+.+++.++ +.||..+|..||+|.++|.+|....
T Consensus 207 ~a~~m~~Li~ki~~~~~~Plp~~-------------ys~el~~lv-----~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 207 KASNMSELILKINRGLYSPLPSM-------------YSSELRSLV-----KSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred CccchHHHHHHHhhccCCCCCcc-------------ccHHHHHHH-----HHHhhcCCccCCCHHHHhhChhhhh
Confidence 45555555555544443444443 237788888 9999999999999999999987764
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.3e-26 Score=243.90 Aligned_cols=161 Identities=29% Similarity=0.383 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..... ....
T Consensus 144 ~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~-----------------------~~~~ 200 (496)
T PTZ00283 144 EAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAAT-----------------------VSDD 200 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccc-----------------------cccc
Confidence 57889999999999999999999999999999999999999999999754321 1112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
.....+||+.|+|||++. +..|+.++ ||||+ ||++|||++|+. |+.
T Consensus 201 ~~~~~~Gt~~Y~aPE~~~---~~~~s~k~--DVwSl--------------GvilyeLltG~~---------------Pf~ 246 (496)
T PTZ00283 201 VGRTFCGTPYYVAPEIWR---RKPYSKKA--DMFSL--------------GVLLYELLTLKR---------------PFD 246 (496)
T ss_pred ccccccCCcceeCHHHhC---CCCCCcHH--HHHHH--------------HHHHHHHHHCCC---------------CCC
Confidence 234568999999999998 66788888 99999 999999876553 333
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
..+....+..........+|.. .++...+++ .+||+.||.+|||+.++++|||+....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 247 GENMEEVMHKTLAGRYDPLPPS-------------ISPEMQEIV-----TALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred CCCHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 3333333333332322233332 226677888 999999999999999999999987543
No 119
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.93 E-value=1.4e-26 Score=228.64 Aligned_cols=186 Identities=20% Similarity=0.252 Sum_probs=122.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 104 ~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------------------------~~ 158 (309)
T cd07872 104 HNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV-------------------------PT 158 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCC-------------------------Cc
Confidence 35788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......+|+.|+|||++.. ...++.++ ||||+ ||++|+|++|++. ..+.+...+..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~el~tg~~pf~~~~~~~~~~~~~~~ 220 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLG--SSEYSTQI--DMWGV--------------GCIFFEMASGRPLFPGSTVEDELHLIFRL 220 (309)
T ss_pred cccccccccccccCCHHHhC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 12234578999999999862 34577778 99999 9999998776642 12223233332
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
.+.|... .+...... .......++...+ ..+.... ...++...++| .+||+.||.+|||++|+++||||..
T Consensus 221 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li-----~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 221 LGTPTEE-TWPGISSN-DEFKNYNFPKYKP-QPLINHA-PRLDTEGIELL-----TKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred hCCCCHH-HHhhhcch-hhhhhhhcCccCC-Cchhhhc-cCCCHHHHHHH-----HHhccCChhhCCCHHHHhcChhhhh
Confidence 2333221 11111000 0000011111100 0010111 12346677888 9999999999999999999999986
Q ss_pred CCC
Q psy7309 237 GSS 239 (454)
Q Consensus 237 ~~~ 239 (454)
...
T Consensus 292 ~~~ 294 (309)
T cd07872 292 LGT 294 (309)
T ss_pred ccc
Confidence 543
No 120
>KOG0690|consensus
Probab=99.93 E-value=1.3e-26 Score=219.00 Aligned_cols=172 Identities=24% Similarity=0.315 Sum_probs=139.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++++.+-.+|++||.|||+++||.||||.+|.|+|.+|++||+|||+++.-. ..+
T Consensus 268 ~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-------------------------~~g 322 (516)
T KOG0690|consen 268 DRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-------------------------KYG 322 (516)
T ss_pred hhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc-------------------------ccc
Confidence 3577888999999999999999999999999999999999999999998432 234
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....++||||.|+|||++- ...|+..+ |.|.+ |+++|||+.|+. |+
T Consensus 323 ~t~kTFCGTPEYLAPEVle---DnDYgraV--DWWG~--------------GVVMYEMmCGRL---------------PF 368 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLE---DNDYGRAV--DWWGV--------------GVVMYEMMCGRL---------------PF 368 (516)
T ss_pred ceeccccCChhhcCchhhc---ccccccee--ehhhh--------------hHHHHHHHhccC---------------cc
Confidence 5567799999999999998 78999999 99999 999999777664 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~ 236 (454)
......+.+.-+. .....||..+ +++++.|+ ..+|.+||++|.. |.|++.|+||..
T Consensus 369 yn~dh~kLFeLIl-~ed~kFPr~l-------------s~eAktLL-----sGLL~kdP~kRLGgGpdDakEi~~h~FF~~ 429 (516)
T KOG0690|consen 369 YNKDHEKLFELIL-MEDLKFPRTL-------------SPEAKTLL-----SGLLKKDPKKRLGGGPDDAKEIMRHRFFAS 429 (516)
T ss_pred cccchhHHHHHHH-hhhccCCccC-------------CHHHHHHH-----HHHhhcChHhhcCCCchhHHHHHhhhhhcc
Confidence 2222222222222 4556677664 38899999 9999999999985 789999999984
Q ss_pred CCCCCCCccCccccccCCCCCCC
Q psy7309 237 GSSSGLSVLGSEQLLTCDHIPPP 259 (454)
Q Consensus 237 ~~~~~~~~~~~~~ll~~~~~~~~ 259 (454)
++|+.+...+..||.
T Consensus 430 --------v~W~~~~~Kki~PPf 444 (516)
T KOG0690|consen 430 --------VDWEATYRKKIEPPF 444 (516)
T ss_pred --------CCHHHHHHhccCCCC
Confidence 678888888877774
No 121
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.93 E-value=3e-26 Score=232.61 Aligned_cols=164 Identities=23% Similarity=0.303 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ....
T Consensus 143 ~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~------------------------~~~~ 198 (370)
T cd05596 143 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA------------------------NGMV 198 (370)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC------------------------CCcc
Confidence 5678899999999999999999999999999999999999999999875421 1111
Q ss_pred CCcCcccccceecccccccc-ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHG-VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~-~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.....+||+.|+|||++... ....++.++ ||||+ ||++|||++|.+ |+
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~--DiwSl--------------GvilyelltG~~---------------Pf 247 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGREC--DWWSV--------------GVFLYEMLVGDT---------------PF 247 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCce--eeeeh--------------hHHHHHHHhCCC---------------Cc
Confidence 22346899999999998632 123477788 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~~ 237 (454)
.+.........+... ....+|... ..+..+.++| ++||+.+|.+ |+|++|+++||||...
T Consensus 248 ~~~~~~~~~~~i~~~~~~~~~~~~~-----------~~s~~~~~li-----~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 248 YADSLVGTYSKIMDHKNSLTFPDDI-----------EISKQAKDLI-----CAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred CCCCHHHHHHHHHcCCCcCCCCCcC-----------CCCHHHHHHH-----HHHccChhhccCCCCHHHHhcCcccCCC
Confidence 333333333333221 223333321 1246778888 9999999998 9999999999999853
No 122
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.93 E-value=2.7e-26 Score=223.20 Aligned_cols=180 Identities=24% Similarity=0.323 Sum_probs=120.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..... ..
T Consensus 99 ~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~-------------------------~~ 153 (284)
T cd07839 99 EIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGI-------------------------PV 153 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCC-------------------------CC
Confidence 46789999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh------hHHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK------TLEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~------~~~~l~~~i~ 155 (454)
.......+|+.|+|||++.. ...++.++ ||||+ ||++|+|++++.+ ....+...+.
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~l~tg~~p~~~~~~~~~~~~~~~~ 215 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFG--AKLYSTSI--DMWSA--------------GCIFAELANAGRPLFPGNDVDDQLKRIFR 215 (284)
T ss_pred CCcCCCccccCCcChHHHhC--CcccCcHH--HHHHH--------------HHHHHHHHhcCCCCcCCCCHHHHHHHHHH
Confidence 12334577899999999861 34467777 99999 9999997754321 1222222222
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
....+ ....+.... ... ....++.......|....+. .++.+.++| ++||+.||.+|||++|++.||||
T Consensus 216 ~~~~~-~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~li-----~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 216 LLGTP-TEESWPGVS-KLP--DYKPYPMYPATTSLVNVVPK-LNSTGRDLL-----QNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred HhCCC-ChHHhHHhh-hcc--cccccCCCCCcchhhhhccc-CCHHHHHHH-----HHHhcCChhhcCCHHHHhcCCCC
Confidence 22222 111111111 110 00111111111223332222 347778888 99999999999999999999998
No 123
>KOG0192|consensus
Probab=99.93 E-value=2.8e-26 Score=229.73 Aligned_cols=154 Identities=29% Similarity=0.373 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcC-CcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQG-IIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~g-iiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
..+.+++.||+.||+|||+++ ||||||||+|||++.++ ++||+|||+++....
T Consensus 142 ~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~------------------------- 196 (362)
T KOG0192|consen 142 KVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI------------------------- 196 (362)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecc-------------------------
Confidence 457899999999999999999 99999999999999998 999999999985432
Q ss_pred CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.....+...||+.|||||++... ...|+.++ ||||+ |+++||+++++.
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~-~~~~~~K~--DvySF--------------gIvlWEl~t~~~--------------- 244 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGE-KSPYTEKS--DVYSF--------------GIVLWELLTGEI--------------- 244 (362)
T ss_pred ccccccCCCCCccccChhhhcCC-CCcCCccc--hhhhH--------------HHHHHHHHHCCC---------------
Confidence 11344557999999999999843 46899999 99999 999999887643
Q ss_pred CCCCchhhhhhhh-hccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 160 PSTGSNVQKSLQK-FQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 160 p~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
|+.+......... .....++.+|... .+....++ .+||..||.+||+..+++.
T Consensus 245 Pf~~~~~~~~~~~v~~~~~Rp~~p~~~-------------~~~l~~l~-----~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVVVGGLRPPIPKEC-------------PPHLSSLM-----ERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CCCCCCHHHHHHHHHhcCCCCCCCccC-------------CHHHHHHH-----HHhCCCCCCcCCCHHHHHH
Confidence 3333332222222 2235555556543 26666777 9999999999999998864
No 124
>KOG4645|consensus
Probab=99.93 E-value=2.8e-26 Score=248.23 Aligned_cols=167 Identities=25% Similarity=0.377 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
.+.+..|+++|++|||++|||||||||+|||++.+|.+|++|||.|..+..... .....
T Consensus 1336 t~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~---------------------~~~~e 1394 (1509)
T KOG4645|consen 1336 TRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ---------------------TMPGE 1394 (1509)
T ss_pred HHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh---------------------cCCHH
Confidence 456789999999999999999999999999999999999999999986643110 22244
Q ss_pred CcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCC
Q psy7309 84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTG 163 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~ 163 (454)
..+.+||+.|||||++....+.+-.... ||||+ ||++.||.+|+-+..+ +
T Consensus 1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~--DiWsl--------------GCVVlEM~tGkrPW~~-~------------- 1444 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAA--DIWSL--------------GCVVLEMATGKRPWAE-L------------- 1444 (1509)
T ss_pred HHhhcCCchhcCchhhcccccCCCCcch--hhhcc--------------cceEEEeecCCCchhh-c-------------
Confidence 5578999999999999844334444556 99999 9999999887643211 1
Q ss_pred chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 164 SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
.+...+...+..+..+.+|+.+ +++.++|| ..||+.||++|+++.|++.|-|-.....
T Consensus 1445 dne~aIMy~V~~gh~Pq~P~~l-------------s~~g~dFl-----e~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1445 DNEWAIMYHVAAGHKPQIPERL-------------SSEGRDFL-----EHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred cchhHHHhHHhccCCCCCchhh-------------hHhHHHHH-----HHHHhcCchhhhHHHHHHHhhccccccc
Confidence 1223344455557777778764 38899999 9999999999999999999998765543
No 125
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.93 E-value=3.8e-26 Score=231.88 Aligned_cols=165 Identities=24% Similarity=0.308 Sum_probs=119.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..... ...
T Consensus 142 ~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~------------------------~~~ 197 (370)
T cd05621 142 KWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE------------------------TGM 197 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceeccc------------------------CCc
Confidence 35788999999999999999999999999999999999999999999975421 111
Q ss_pred CCCcCcccccceeccccccccc-cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGV-KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~-~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
......+||+.|+|||++.... ...|+.++ |+||+ ||++|||++|.+ |
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~--DiwSl--------------G~ilyell~G~~---------------P 246 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGREC--DWWSV--------------GVFLFEMLVGDT---------------P 246 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCccc--CEEee--------------hHHHHHHHhCCC---------------C
Confidence 1234568999999999987321 23477788 99999 999999877654 3
Q ss_pred CCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCcccccC
Q psy7309 161 STGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLEG 237 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~~ 237 (454)
+...+......++.. .....+|... ..+..+++++ .+||..+|.+ |+|++|+++||||...
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~p~~~-----------~~s~~~~~li-----~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 247 FYADSLVGTYSKIMDHKNSLNFPEDV-----------EISKHAKNLI-----CAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCCCHHHHHHHHHhCCcccCCCCcc-----------cCCHHHHHHH-----HHHccCchhccCCCCHHHHhcCcccCCC
Confidence 333333333333321 1223333321 1236677888 9999866544 8999999999999864
No 126
>KOG0664|consensus
Probab=99.93 E-value=2.6e-26 Score=212.61 Aligned_cols=187 Identities=26% Similarity=0.296 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++-+++||+.||+|||+.||.||||||.|.|++.|..+||||||+|+.... ...
T Consensus 156 DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~------------------------d~~ 211 (449)
T KOG0664|consen 156 DHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ------------------------RDR 211 (449)
T ss_pred chhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch------------------------hhh
Confidence 35788999999999999999999999999999999999999999999996432 234
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
...+..+-|-+|+|||++. +...|+..+ ||||+ |||+.|+++.+. ..+.++.-++..
T Consensus 212 ~hMTqEVVTQYYRAPEiLM--GaRhYs~Av--DiWSV--------------GCIFaELLgRrILFQAq~PiqQL~lItdL 273 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLM--GARRYTGAV--DIWSV--------------GCIFAELLQRKILFQAAGPIEQLQMIIDL 273 (449)
T ss_pred hhhHHHHHHHHhccHHHhh--cchhhcCcc--ceehh--------------hHHHHHHHhhhhhhhccChHHHHHHHHHH
Confidence 4567788999999999998 367899999 99999 999999887554 344555444444
Q ss_pred cCCCCCCchhhhhhh----hhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 157 ENGPSTGSNVQKSLQ----KFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
++.|. -+..+..+. -+. .....-|... ..-++ .++.-+.-.-|+++..||..||.+|.+.++++.|+
T Consensus 274 LGTPs-~EaMr~ACEGAk~H~L-R~~~k~Ps~~---vLYtl----sS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 274 LGTPS-QEAMKYACEGAKNHVL-RAGLRAPDTQ---RLYKI----ASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hCCCc-HHHHHHHhhhhHHHhh-ccCCCCCCcc---ceeee----cCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 44443 222221111 111 1111111110 01111 11111222222344899999999999999999999
Q ss_pred ccccCCC
Q psy7309 233 ISLEGSS 239 (454)
Q Consensus 233 ~f~~~~~ 239 (454)
+..++.-
T Consensus 345 ~~~e~R~ 351 (449)
T KOG0664|consen 345 YLEEGRL 351 (449)
T ss_pred cccccce
Confidence 9887654
No 127
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.93 E-value=4.2e-26 Score=229.88 Aligned_cols=166 Identities=27% Similarity=0.350 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.+++||+.||+|||++||+||||||+|||++.++.+||+|||++..+.. ...
T Consensus 169 ~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~-------------------------~~~ 223 (353)
T PLN00034 169 FLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ-------------------------TMD 223 (353)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccc-------------------------ccc
Confidence 4678999999999999999999999999999999999999999999875431 111
Q ss_pred CCcCcccccceeccccccccc--cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGV--KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~--~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.....+||..|+|||++.... +..++.++ ||||+ ||++|||+.|+.....
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~--Dvwsl--------------Gvil~el~~g~~pf~~------------ 275 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAG--DIWSL--------------GVSILEFYLGRFPFGV------------ 275 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcch--hHHHH--------------HHHHHHHHhCCCCCCC------------
Confidence 223458999999999985211 22234466 99999 9999997766542110
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
.....+......+........+.. .+..+.+|| .+||+.||++|||+.|+++||||.....
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 276 GRQGDWASLMCAICMSQPPEAPAT-------------ASREFRHFI-----SCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred CCCccHHHHHHHHhccCCCCCCCc-------------cCHHHHHHH-----HHHccCChhhCcCHHHHhcCcccccCCc
Confidence 000111111111111222222221 235677888 9999999999999999999999997643
No 128
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.93 E-value=3.6e-26 Score=227.65 Aligned_cols=158 Identities=27% Similarity=0.353 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 101 ~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~-------------------------~~ 155 (323)
T cd05615 101 PQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV-------------------------DG 155 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCC-------------------------CC
Confidence 46788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||++. +..++.++ |+||+ ||++|||++|++ |+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~elltG~~---------------pf 201 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIA---YQPYGKSV--DWWAY--------------GVLLYEMLAGQP---------------PF 201 (323)
T ss_pred ccccCccCCccccCHHHHc---CCCCCCcc--chhhh--------------HHHHHHHHhCCC---------------CC
Confidence 1233457999999999987 56788888 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~ 236 (454)
.+.........+. .....+|... +..+.+++ .+||+.||.+|+++ +++++||||..
T Consensus 202 ~~~~~~~~~~~i~-~~~~~~p~~~-------------~~~~~~li-----~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 202 DGEDEDELFQSIM-EHNVSYPKSL-------------SKEAVSIC-----KGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred CCCCHHHHHHHHH-hCCCCCCccC-------------CHHHHHHH-----HHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 3333333333333 2223334332 25667888 99999999999984 78999999985
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 263 ~ 263 (323)
T cd05615 263 I 263 (323)
T ss_pred C
Confidence 3
No 129
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.92 E-value=1.3e-25 Score=228.13 Aligned_cols=184 Identities=23% Similarity=0.286 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCcc-----C--------
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYI-----L-------- 69 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~-----~-------- 69 (454)
.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+................ .
T Consensus 102 ~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
T cd05598 102 LARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID 181 (376)
T ss_pred HHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccc
Confidence 567889999999999999999999999999999999999999999986432110000000000000 0
Q ss_pred ----CCCCCCC-cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 70 ----PPIDSTA-FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 70 ----~~~~~~~-~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
.++.... ...........+||+.|||||++. +..++.++ ||||+ ||++|||++|+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvilyell~G~~ 242 (376)
T cd05598 182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL---RTGYTQLC--DWWSV--------------GVILYEMLVGQP 242 (376)
T ss_pred cccccchhhhhhhhcccccccccCCCccccCHHHHc---CCCCCcce--eeeec--------------cceeeehhhCCC
Confidence 0000000 000011223568999999999998 67788888 99999 999999877654
Q ss_pred hhHHHHHHHhhhcCCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC
Q psy7309 145 KTLEELKHNIRRENGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP 223 (454)
Q Consensus 145 ~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp 223 (454)
|+.+.........+.. .....++.. ...++...++| .+|+ .+|.+|+
T Consensus 243 ---------------Pf~~~~~~~~~~~i~~~~~~~~~~~~-----------~~~s~~~~~li-----~~l~-~~p~~R~ 290 (376)
T cd05598 243 ---------------PFLADTPAETQLKVINWETTLHIPSQ-----------AKLSREASDLI-----LRLC-CGAEDRL 290 (376)
T ss_pred ---------------CCCCCCHHHHHHHHhccCccccCCCC-----------CCCCHHHHHHH-----HHHh-cCHhhcC
Confidence 2322222222222211 111122221 11236677788 7776 5999999
Q ss_pred ---ChhhhhcCcccccC
Q psy7309 224 ---SSEQNLCQPISLEG 237 (454)
Q Consensus 224 ---ta~e~l~hp~f~~~ 237 (454)
|+.|+++||||...
T Consensus 291 ~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 291 GKNGADEIKAHPFFKGI 307 (376)
T ss_pred CCCCHHHHhCCCCcCCC
Confidence 99999999999853
No 130
>KOG0580|consensus
Probab=99.92 E-value=1.9e-26 Score=210.23 Aligned_cols=155 Identities=23% Similarity=0.332 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.+++|++.||.|+|.+++|||||||+|+|++.+|.+||+|||-+..- ...
T Consensus 125 ~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~---------------------------p~~ 177 (281)
T KOG0580|consen 125 RAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA---------------------------PSN 177 (281)
T ss_pred chhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec---------------------------CCC
Confidence 57889999999999999999999999999999999999999999988642 244
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+.|||.-|.+||+.. +..++.++ |+|++ |++.||++.|.+ ||.
T Consensus 178 kR~tlcgt~dyl~pEmv~---~~~hd~~V--d~w~l--------------gvl~yeflvg~p---------------pFe 223 (281)
T KOG0580|consen 178 KRKTLCGTLDYLPPEMVE---GRGHDKFV--DLWSL--------------GVLCYEFLVGLP---------------PFE 223 (281)
T ss_pred CceeeecccccCCHhhcC---CCCccchh--hHHHH--------------HHHHHHHHhcCC---------------chh
Confidence 667789999999999998 88999999 99999 999999765544 444
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
.....+..+++. ..+..+|... +..+.++| .+||.++|.+|.+..|++.|||....
T Consensus 224 s~~~~etYkrI~-k~~~~~p~~i-------------s~~a~dlI-----~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 224 SQSHSETYKRIR-KVDLKFPSTI-------------SGGAADLI-----SRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred hhhhHHHHHHHH-HccccCCccc-------------ChhHHHHH-----HHHhccCccccccHHHHhhhHHHHhc
Confidence 444444455554 3445566443 37888999 99999999999999999999998754
No 131
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.92 E-value=3.5e-26 Score=239.77 Aligned_cols=160 Identities=25% Similarity=0.336 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+... ....
T Consensus 170 ~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~-----------------------~~~~ 226 (478)
T PTZ00267 170 EVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS-----------------------VSLD 226 (478)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc-----------------------cccc
Confidence 57789999999999999999999999999999999999999999999854321 1112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
.....+||+.|+|||++. +..++.++ ||||+ ||++|||++|+. |+.
T Consensus 227 ~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~~l~el~tg~~---------------Pf~ 272 (478)
T PTZ00267 227 VASSFCGTPYYLAPELWE---RKRYSKKA--DMWSL--------------GVILYELLTLHR---------------PFK 272 (478)
T ss_pred cccccCCCccccCHhHhC---CCCCCcHH--hHHHH--------------HHHHHHHHhCCC---------------CCC
Confidence 234568999999999987 66788888 99999 999999877653 333
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
.......+..+.......+|.. .+....++| .+||..||++|||+++++.|+|+...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-------------~s~~~~~li-----~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 273 GPSQREIMQQVLYGKYDPFPCP-------------VSSGMKALL-----DPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred CCCHHHHHHHHHhCCCCCCCcc-------------CCHHHHHHH-----HHHhccChhhCcCHHHHHhCHHHHHH
Confidence 3333333333332322223322 225677888 99999999999999999999999753
No 132
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.92 E-value=9.3e-26 Score=228.05 Aligned_cols=185 Identities=26% Similarity=0.346 Sum_probs=121.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCc--------cCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGY--------ILPPID 73 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~--------~~~~~~ 73 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+............... ...+..
T Consensus 101 ~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (364)
T cd05599 101 EETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS 180 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccccccccccccc
Confidence 367889999999999999999999999999999999999999999999754321100000000000 000000
Q ss_pred CCCcc-----cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHH
Q psy7309 74 STAFY-----SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLE 148 (454)
Q Consensus 74 ~~~~~-----~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~ 148 (454)
..... .........+||+.|+|||++. ...|+.++ ||||+ ||++|||++|.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~el~~G~~---- 237 (364)
T cd05599 181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFL---QTGYNKEC--DWWSL--------------GVIMYEMLVGYP---- 237 (364)
T ss_pred ccccccchhhcccccccccccCccccCHHHHc---CCCCCCee--eeecc--------------hhHHHHhhcCCC----
Confidence 00000 0001123468999999999987 66788888 99999 999999877654
Q ss_pred HHHHHhhhcCCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC---
Q psy7309 149 ELKHNIRRENGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS--- 224 (454)
Q Consensus 149 ~l~~~i~~~~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt--- 224 (454)
|+.+.........+.. .....+|... ..++.+.++| ++||. +|.+|++
T Consensus 238 -----------Pf~~~~~~~~~~~i~~~~~~~~~~~~~-----------~~s~~~~~li-----~~ll~-~p~~R~~~~~ 289 (364)
T cd05599 238 -----------PFCSDNPQETYRKIINWKETLQFPDEV-----------PLSPEAKDLI-----KRLCC-EAERRLGNNG 289 (364)
T ss_pred -----------CCCCCCHHHHHHHHHcCCCccCCCCCC-----------CCCHHHHHHH-----HHHcc-CHhhcCCCCC
Confidence 3333322222222221 1222233321 1236777888 99996 9999998
Q ss_pred hhhhhcCcccccC
Q psy7309 225 SEQNLCQPISLEG 237 (454)
Q Consensus 225 a~e~l~hp~f~~~ 237 (454)
++|++.||||...
T Consensus 290 ~~~ll~h~~~~~~ 302 (364)
T cd05599 290 VNEIKSHPFFKGV 302 (364)
T ss_pred HHHHhcCCCcCCC
Confidence 9999999999853
No 133
>KOG4279|consensus
Probab=99.92 E-value=1.6e-25 Score=228.72 Aligned_cols=164 Identities=27% Similarity=0.409 Sum_probs=126.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+-.+.+|||+||+|||++.|||||||.+|+|++ ..|.+||+|||.++.+. .-.
T Consensus 676 tm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-------------------------gin 730 (1226)
T KOG4279|consen 676 TMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-------------------------GIN 730 (1226)
T ss_pred HHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc-------------------------cCC
Confidence 3567899999999999999999999999999997 46889999999998763 123
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....++.||..|||||++-++ ..+|+..+ ||||+ ||++-||.+|+|+.. +++.|
T Consensus 731 P~TETFTGTLQYMAPEvIDqG-~RGYG~aA--DIWS~--------------GCT~vEMATGrPPF~--------Elgsp- 784 (1226)
T KOG4279|consen 731 PCTETFTGTLQYMAPEVIDQG-PRGYGKAA--DIWSF--------------GCTMVEMATGRPPFV--------ELGSP- 784 (1226)
T ss_pred ccccccccchhhhChHhhccC-CcCCCchh--hhhhc--------------cceeEeeccCCCCee--------ecCCh-
Confidence 345578999999999999854 46788888 99999 999999999998542 12222
Q ss_pred CCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 162 TGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
+....++. ...-+.+|+. .+.+++.|| .+|+..||.+||+|.++|..||++-....
T Consensus 785 -----qAAMFkVGmyKvHP~iPee-------------lsaeak~Fi-----lrcFepd~~~R~sA~~LL~DpFlq~~~kk 841 (1226)
T KOG4279|consen 785 -----QAAMFKVGMYKVHPPIPEE-------------LSAEAKNFI-----LRCFEPDPCDRPSAKDLLQDPFLQHNNKK 841 (1226)
T ss_pred -----hHhhhhhcceecCCCCcHH-------------HHHHHHHHH-----HHHcCCCcccCccHHHhccCcccccCCCC
Confidence 11111111 0222333433 248888999 99999999999999999999999877443
No 134
>KOG0670|consensus
Probab=99.92 E-value=1.3e-25 Score=223.26 Aligned_cols=185 Identities=22% Similarity=0.280 Sum_probs=130.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC-eEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 1 MGRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH-VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 1 ~~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~-vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
|..|+.+++|+..||.+|-.+||+|.||||+|||++...+ +||||||.|....
T Consensus 535 ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~-------------------------- 588 (752)
T KOG0670|consen 535 IKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFAS-------------------------- 588 (752)
T ss_pred ehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccc--------------------------
Confidence 3578899999999999999999999999999999998765 7999999997543
Q ss_pred CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch----hhHHHHHHHhh
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP----KTLEELKHNIR 155 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~----~~~~~l~~~i~ 155 (454)
....+...-+.+|+|||+++ +..|+... |+||+ ||++||+|+|.. .+-.++...+.
T Consensus 589 -eneitPYLVSRFYRaPEIiL---G~~yd~~i--D~WSv--------------gctLYElYtGkIlFpG~TNN~MLrl~m 648 (752)
T KOG0670|consen 589 -ENEITPYLVSRFYRAPEIIL---GLPYDYPI--DTWSV--------------GCTLYELYTGKILFPGRTNNQMLRLFM 648 (752)
T ss_pred -cccccHHHHHHhccCcceee---cCcccCCc--cceee--------------ceeeEEeeccceecCCCCcHHHHHHHH
Confidence 34556677889999999999 89999999 99999 999999999776 34455555666
Q ss_pred hcCCCCCCchhhhhhhh---hccCCC--------------C-CCCcccccccc-cccccc--c------cccchhHHHHH
Q psy7309 156 RENGPSTGSNVQKSLQK---FQKSPP--------------S-VYREWRSSFEW-STVRNN--I------KSNFQHFLILI 208 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~---~~~~~~--------------~-~~p~~~~~~~~-~~~~~~--~------~~~~~~~li~~ 208 (454)
++.++++..-..+.... |...-. . .++...+.-++ +.+... . .-..+.+||
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLL-- 726 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLL-- 726 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHH--
Confidence 77777765433321110 000000 0 00000000000 001110 0 013344555
Q ss_pred HHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 209 HQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 209 ~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
.+||..||++|.|..|||+||||.+
T Consensus 727 ---dkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 727 ---DKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred ---HHHhccChhhcCCHHHHhcCCcccC
Confidence 9999999999999999999999974
No 135
>KOG0574|consensus
Probab=99.92 E-value=9.1e-27 Score=218.08 Aligned_cols=164 Identities=23% Similarity=0.406 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+++-.+++..|.||+|||...-||||||..|||++.+|+.||+|||.|.++.+ ..
T Consensus 129 ~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-------------------------TM 183 (502)
T KOG0574|consen 129 QEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-------------------------TM 183 (502)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh-------------------------hH
Confidence 36778999999999999999999999999999999999999999999987753 23
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....+.+|||+|||||++. .-+|+.++ ||||| |++..||..|+|+ +
T Consensus 184 AKRNTVIGTPFWMAPEVI~---EIGY~~~A--DIWSL--------------GITaIEMAEG~PP---------------Y 229 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIE---EIGYDTKA--DIWSL--------------GITAIEMAEGRPP---------------Y 229 (502)
T ss_pred HhhCccccCcccccHHHHH---Hhccchhh--hHhhh--------------cchhhhhhcCCCC---------------c
Confidence 4567789999999999998 78899999 99999 9999999887763 3
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
.+-.....+.-+...+++.|.+. -.|+ ++..+|+ ++||.++|++|.||-++++|||.+....+
T Consensus 230 sDIHPMRAIFMIPT~PPPTF~KP---E~WS--------~~F~DFi-----~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 230 SDIHPMRAIFMIPTKPPPTFKKP---EEWS--------SEFNDFI-----RSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred ccccccceeEeccCCCCCCCCCh---Hhhh--------hHHHHHH-----HHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 33222223333344555555443 2354 6667888 99999999999999999999999977665
No 136
>PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=99.92 E-value=5.6e-25 Score=211.45 Aligned_cols=131 Identities=9% Similarity=0.080 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEE-cCCCCeEeeCCCCCHHHHHHHHHcCCCCcee
Q psy7309 313 SLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVM-TRGGSIVTLPHDLRIPFARYLAQNGSIVSMK 387 (454)
Q Consensus 313 ~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~-d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k 387 (454)
..++.|++++.++|++|||.+|.||+||+++++... ...+++++ |.+|+.++||||+|+|+||++|.+. ..+.|
T Consensus 8 ~~~~~ie~~l~~~f~~~GY~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~Gr~laLRpD~T~~iAR~~a~~~-~~~~R 86 (272)
T PRK12294 8 IALKESETAFLKYFNKADYELVDFSVIEKLDWKQLNHEDLQQMGERSFWQHEHQIYALRNDFTDQLLRYYSMYP-TAATK 86 (272)
T ss_pred HHHHHHHHHHHHHHHHcCCeEeeCCcchhHHhhhccccchhhhheeeeecCCCCEEEEcCCCCHHHHHHHHhcC-CCCce
Confidence 468899999999999999999999999999986322 13445555 6699999999999999999988754 45679
Q ss_pred eEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcE-EEcCcccc
Q psy7309 388 RYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNIS-FAPHPRVL 453 (454)
Q Consensus 388 ~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~-i~i~~~~~ 453 (454)
+||+|+|||+++ +++|+|+|+||. +..+++|++.+|++++..+|..++. |++||.++
T Consensus 87 l~Y~g~VfR~~~-------~~~Q~GvEliG~--~~~a~~e~l~la~~~l~~~g~~~~~~i~lGh~~~ 144 (272)
T PRK12294 87 VAYAGLIIRNNE-------AAVQVGIENYAP--SLANVQQSFKLFIQFIQQQLRDNVHFVVLGHYQL 144 (272)
T ss_pred EEEeccEeccCC-------CcceeceEEECC--CchhHHHHHHHHHHHHHHhCCCCCcEEEeccHHH
Confidence 999999999863 489999999994 5789999999999999999777654 79999864
No 137
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.92 E-value=1.4e-25 Score=228.47 Aligned_cols=184 Identities=24% Similarity=0.296 Sum_probs=119.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCcccccc-------Ccc---CCC-
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELT-------GYI---LPP- 71 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~-------~~~---~~~- 71 (454)
.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+...........+. ... ..+
T Consensus 102 ~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (382)
T cd05625 102 LARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPA 181 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccc
Confidence 578899999999999999999999999999999999999999999986432110000000000 000 000
Q ss_pred -----------CCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeec
Q psy7309 72 -----------IDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY 140 (454)
Q Consensus 72 -----------~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~ 140 (454)
................+||+.|+|||++. +..|+.++ ||||+ ||++|||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~ell 242 (382)
T cd05625 182 NCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL---RTGYTQLC--DWWSV--------------GVILYEML 242 (382)
T ss_pred cccccccccchhhhhccccccccccccccCcccCCHHHhc---CCCCCCee--eEEec--------------hHHHHHHH
Confidence 00000001111223568999999999998 67788888 99999 99999987
Q ss_pred CCchhhHHHHHHHhhhcCCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCC
Q psy7309 141 KDRPKTLEELKHNIRRENGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDP 219 (454)
Q Consensus 141 ~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP 219 (454)
+|++ |+.+.........+.. .....+|.. ...++.+.++| .+|+ .||
T Consensus 243 tG~~---------------Pf~~~~~~~~~~~i~~~~~~~~~p~~-----------~~~s~~~~~li-----~~l~-~~p 290 (382)
T cd05625 243 VGQP---------------PFLAQTPLETQMKVINWQTSLHIPPQ-----------AKLSPEASDLI-----IKLC-RGP 290 (382)
T ss_pred hCCC---------------CCCCCCHHHHHHHHHccCCCcCCCCc-----------ccCCHHHHHHH-----HHHc-cCH
Confidence 7664 3333222222222221 122222322 12247777888 7776 599
Q ss_pred CCCCC---hhhhhcCcccccC
Q psy7309 220 SKRPS---SEQNLCQPISLEG 237 (454)
Q Consensus 220 ~~Rpt---a~e~l~hp~f~~~ 237 (454)
.+|++ ++|+++||||...
T Consensus 291 ~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 291 EDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred hHcCCCCCHHHHhcCCCcCCc
Confidence 99998 9999999999763
No 138
>KOG0611|consensus
Probab=99.92 E-value=1.1e-25 Score=217.96 Aligned_cols=160 Identities=24% Similarity=0.359 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+++++|+||++|+.|+|.++++|||||.+|||+|.|+++||+|||++-.+ ..+.
T Consensus 154 EaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly--------------------------~~~k 207 (668)
T KOG0611|consen 154 EARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLY--------------------------ADKK 207 (668)
T ss_pred HHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhh--------------------------cccc
Confidence 68999999999999999999999999999999999999999999999765 3456
Q ss_pred CCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
..+++||+|.|.+||++. +.+| +..+ |-||| |+++|.+.-| ..||
T Consensus 208 fLqTFCGSPLYASPEIvN---G~PY~GPEV--DsWsL--------------GvLLYtLVyG---------------tMPF 253 (668)
T KOG0611|consen 208 FLQTFCGSPLYASPEIVN---GTPYKGPEV--DSWSL--------------GVLLYTLVYG---------------TMPF 253 (668)
T ss_pred HHHHhcCCcccCCccccC---CCCCCCCcc--chhhH--------------HHHHHHHhhc---------------cccc
Confidence 788899999999999998 6777 4677 99999 8888884322 2355
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSG 241 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~ 241 (454)
.+......+.++..+.. .=|+.. +++.-|| +|||..||.+|.|.+++..|=|.+-+....
T Consensus 254 DG~Dhk~lvrQIs~GaY-rEP~~P--------------SdA~gLI-----RwmLmVNP~RRATieDiAsHWWvNwgy~~~ 313 (668)
T KOG0611|consen 254 DGRDHKRLVRQISRGAY-REPETP--------------SDASGLI-----RWMLMVNPERRATIEDIASHWWVNWGYNMP 313 (668)
T ss_pred CCchHHHHHHHhhcccc-cCCCCC--------------chHHHHH-----HHHHhcCcccchhHHHHhhhheeecccccc
Confidence 55555555555554333 223332 5566788 999999999999999999999988766543
Q ss_pred C
Q psy7309 242 L 242 (454)
Q Consensus 242 ~ 242 (454)
+
T Consensus 314 V 314 (668)
T KOG0611|consen 314 V 314 (668)
T ss_pred c
Confidence 3
No 139
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.92 E-value=2e-25 Score=222.96 Aligned_cols=184 Identities=25% Similarity=0.367 Sum_probs=123.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+..... ...
T Consensus 105 ~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~---------------------~~~ 163 (332)
T cd07857 105 AHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG---------------------ENA 163 (332)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc---------------------ccc
Confidence 46788999999999999999999999999999999999999999999985432100 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......||+.|+|||++.. ...++.++ |+||+ |+++++++++.+. ....+...+..
T Consensus 164 ~~~~~~~g~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------Gv~l~~l~~g~~pf~~~~~~~~~~~~~~~ 225 (332)
T cd07857 164 GFMTEYVATRWYRAPEIMLS--FQSYTKAI--DVWSV--------------GCILAELLGRKPVFKGKDYVDQLNQILQV 225 (332)
T ss_pred ccccCcccCccccCcHHHhC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCcCCCCCCHHHHHHHHHHH
Confidence 12334688999999998751 35678888 99999 9999987766542 12223333333
Q ss_pred cCCCCCCchhhh--------hhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhh
Q psy7309 157 ENGPSTGSNVQK--------SLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN 228 (454)
Q Consensus 157 ~~~p~~~~~~~~--------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~ 228 (454)
.+.|... .... ....+.......++.. . ...+....+++ .+||+.||++|||+.|+
T Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~li-----~~~l~~~P~~R~t~~~l 289 (332)
T cd07857 226 LGTPDEE-TLSRIGSPKAQNYIRSLPNIPKKPFESI---------F-PNANPLALDLL-----EKLLAFDPTKRISVEEA 289 (332)
T ss_pred hCCCCHH-HHHhhhhhhHHHHHHhccccCCcchHhh---------C-CCCCHHHHHHH-----HHHccCCcccCCCHHHH
Confidence 3333211 1110 0011111111111111 0 11235666777 99999999999999999
Q ss_pred hcCcccccCCCC
Q psy7309 229 LCQPISLEGSSS 240 (454)
Q Consensus 229 l~hp~f~~~~~~ 240 (454)
+.|||+.+...+
T Consensus 290 l~~~~~~~~~~~ 301 (332)
T cd07857 290 LEHPYLAIWHDP 301 (332)
T ss_pred hcChhhhhhcCc
Confidence 999999877543
No 140
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.92 E-value=1.5e-25 Score=214.46 Aligned_cols=156 Identities=25% Similarity=0.329 Sum_probs=117.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.|++.||++||++||+|+||||+||+++.++.++|+|||++..... ..
T Consensus 102 ~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~-------------------------~~ 156 (257)
T cd08223 102 NQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN-------------------------QC 156 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecc-------------------------cC
Confidence 46789999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||++. +..++.++ |+||+ |++++++++++. |+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~---------------~~ 202 (257)
T cd08223 157 DMASTLIGTPYYMSPELFS---NKPYNYKS--DVWAL--------------GCCVYEMATLKH---------------AF 202 (257)
T ss_pred CccccccCCcCccChhHhc---CCCCCchh--hhHHH--------------HHHHHHHHcCCC---------------CC
Confidence 1233457899999999987 56778888 99999 999999776543 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+.......+..+.....+.. .++...+++ .+||+.||.+|||+.++++||||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 203 NAKDMNSLVYRIIEGKLPPMPKD-------------YSPELGELI-----ATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred CCCCHHHHHHHHHhcCCCCCccc-------------cCHHHHHHH-----HHHhccCcccCCCHHHHhcCCCC
Confidence 22222222222222221122221 226677888 99999999999999999999997
No 141
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.92 E-value=1.5e-25 Score=227.76 Aligned_cols=183 Identities=24% Similarity=0.316 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCc---cccccCcc----------C
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPL---ARELTGYI----------L 69 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~---~~~~~~~~----------~ 69 (454)
.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+.+........ ........ .
T Consensus 102 ~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T cd05629 102 VTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAV 181 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccc
Confidence 5778999999999999999999999999999999999999999999974321100000 00000000 0
Q ss_pred CCCCCCC---------cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeec
Q psy7309 70 PPIDSTA---------FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY 140 (454)
Q Consensus 70 ~~~~~~~---------~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~ 140 (454)
....... ...........+||+.|+|||++. +..|+.++ ||||+ ||++|||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~ell 242 (377)
T cd05629 182 DSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL---QQGYGQEC--DWWSL--------------GAIMFECL 242 (377)
T ss_pred ccccccccchhhhhhhhhcccccccccCCCccccCHHHHc---cCCCCCce--eeEec--------------chhhhhhh
Confidence 0000000 000001122468999999999997 66788888 99999 99999988
Q ss_pred CCchhhHHHHHHHhhhcCCCCCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCC
Q psy7309 141 KDRPKTLEELKHNIRRENGPSTGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDP 219 (454)
Q Consensus 141 ~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP 219 (454)
+|.+ |+........+..+.. .....+|... ..+..+.++| .+||. +|
T Consensus 243 tG~~---------------Pf~~~~~~~~~~~i~~~~~~~~~p~~~-----------~~s~~~~dli-----~~lL~-~~ 290 (377)
T cd05629 243 IGWP---------------PFCSENSHETYRKIINWRETLYFPDDI-----------HLSVEAEDLI-----RRLIT-NA 290 (377)
T ss_pred cCCC---------------CCCCCCHHHHHHHHHccCCccCCCCCC-----------CCCHHHHHHH-----HHHhc-CH
Confidence 7764 2222222222222221 1222233221 1236677888 99997 77
Q ss_pred CCC---CChhhhhcCccccc
Q psy7309 220 SKR---PSSEQNLCQPISLE 236 (454)
Q Consensus 220 ~~R---pta~e~l~hp~f~~ 236 (454)
.+| +|+.|++.||||..
T Consensus 291 ~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 291 ENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred hhcCCCCCHHHHhcCCCcCC
Confidence 775 59999999999974
No 142
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.92 E-value=1.5e-25 Score=220.40 Aligned_cols=185 Identities=22% Similarity=0.278 Sum_probs=120.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+|+||||+|||++.++.+||+|||++..... ..
T Consensus 104 ~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~-------------------------~~ 158 (301)
T cd07873 104 HNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSI-------------------------PT 158 (301)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCC-------------------------CC
Confidence 35788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......+++.|+|||++.. ...++.++ ||||+ |+++|||++|++. ..+.+......
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~--~~~~~~~~--Dv~sl--------------G~~l~el~tg~~~f~~~~~~~~~~~~~~~ 220 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLG--STDYSTQI--DMWGV--------------GCIFYEMSTGRPLFPGSTVEEQLHFIFRI 220 (301)
T ss_pred CcccccceeecccCcHHHhC--CCCCccHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 12233467899999999862 34567777 99999 9999998776642 11222222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
...|... .+......-. .....++...... . .......++...++| .+||+.||.+|||++|+++||||..
T Consensus 221 ~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li-----~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 221 LGTPTEE-TWPGILSNEE-FKSYNYPKYRADC-L-HNHAPRLDSDGAELL-----SKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred cCCCChh-hchhhhcccc-ccccccCcccccc-H-HhhcCCCCHHHHHHH-----HHHhcCCcccCcCHHHHhcCccccc
Confidence 2222211 1111110000 0011111111000 0 000112346677888 9999999999999999999999975
Q ss_pred CC
Q psy7309 237 GS 238 (454)
Q Consensus 237 ~~ 238 (454)
..
T Consensus 292 ~~ 293 (301)
T cd07873 292 LG 293 (301)
T ss_pred cc
Confidence 44
No 143
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.92 E-value=3e-25 Score=216.00 Aligned_cols=167 Identities=25% Similarity=0.324 Sum_probs=119.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||++..... ..
T Consensus 103 ~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~-------------------------~~ 157 (282)
T cd06643 103 PQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-------------------------TI 157 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccc-------------------------cc
Confidence 46788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.......||..|+|||++... ....++.++ |+||+ ||++|++++++++
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Dv~sl--------------Gvil~el~~g~~p-------------- 207 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA--DVWSL--------------GITLIEMAQIEPP-------------- 207 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccc--hhhhH--------------HHHHHHHccCCCC--------------
Confidence 123345789999999998421 234567777 99999 9999998776542
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
+....................+.. ...+....++| .+||+.||.+|||+.++++||||.....
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 208 -HHELNPMRVLLKIAKSEPPTLAQP-----------SRWSSEFKDFL-----KKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred -ccccCHHHHHHHHhhcCCCCCCCc-----------cccCHHHHHHH-----HHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 211111111111111111111111 11125667888 9999999999999999999999997655
Q ss_pred C
Q psy7309 240 S 240 (454)
Q Consensus 240 ~ 240 (454)
.
T Consensus 271 ~ 271 (282)
T cd06643 271 K 271 (282)
T ss_pred C
Confidence 4
No 144
>KOG0614|consensus
Probab=99.92 E-value=8.5e-26 Score=224.09 Aligned_cols=170 Identities=25% Similarity=0.315 Sum_probs=137.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++..+++|+.|||++|||.|||||+|.+++.+|.+||.|||+|+.+. .+.
T Consensus 521 tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~--------------------------~g~ 574 (732)
T KOG0614|consen 521 TARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG--------------------------SGR 574 (732)
T ss_pred hhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhc--------------------------cCC
Confidence 467788899999999999999999999999999999999999999999874 355
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...++||||.|.|||+++ +.+.+.++ |+||| |+++||+++|.| ||.
T Consensus 575 KTwTFcGTpEYVAPEIIL---nKGHD~av--DyWaL--------------GIli~ELL~G~p---------------PFs 620 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIIL---NKGHDRAV--DYWAL--------------GILIYELLTGSP---------------PFS 620 (732)
T ss_pred ceeeecCCcccccchhhh---ccCcchhh--HHHHH--------------HHHHHHHHcCCC---------------CCC
Confidence 677899999999999999 78889999 99999 999999887765 666
Q ss_pred CchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309 163 GSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE 236 (454)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~ 236 (454)
+.+...+...+.++ ....+|... ...+.++| +++...+|.+|.. +.++-+|.||.
T Consensus 621 ~~dpmktYn~ILkGid~i~~Pr~I-------------~k~a~~Li-----k~LCr~~P~ERLG~~~~gI~DIkkH~Wf~- 681 (732)
T KOG0614|consen 621 GVDPMKTYNLILKGIDKIEFPRRI-------------TKTATDLI-----KKLCRDNPTERLGYQKGGINDIKKHRWFE- 681 (732)
T ss_pred CCchHHHHHHHHhhhhhhhccccc-------------chhHHHHH-----HHHHhcCcHhhhccccCChHHHHhhhhhh-
Confidence 66555555544432 334455442 25667888 9999999999997 78999999997
Q ss_pred CCCCCCCccCccccccCCCCCC
Q psy7309 237 GSSSGLSVLGSEQLLTCDHIPP 258 (454)
Q Consensus 237 ~~~~~~~~~~~~~ll~~~~~~~ 258 (454)
.+||+-+......||
T Consensus 682 -------gfdweglr~~~L~pP 696 (732)
T KOG0614|consen 682 -------GFDWEGLRSRTLPPP 696 (732)
T ss_pred -------cCChhhhhhccCCCC
Confidence 467776665554444
No 145
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.92 E-value=1.3e-25 Score=218.39 Aligned_cols=179 Identities=27% Similarity=0.369 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++..... ..
T Consensus 101 ~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------------~~ 155 (285)
T cd07861 101 ELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI-------------------------PV 155 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC-------------------------Cc
Confidence 35788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......+++.|+|||++.. ...++.++ |+||+ ||+++++++|++. ....+...+..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~il~~l~tg~~~~~~~~~~~~~~~~~~~ 217 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLG--SPRYSTPV--DIWSI--------------GTIFAEMATKKPLFHGDSEIDQLFRIFRI 217 (285)
T ss_pred ccccCCcccccccChHHhcC--CCCcCcHH--HHHHH--------------HHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 12334577899999998762 34567777 99999 9999998776642 22233333332
Q ss_pred cCCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+..... .......+. ..++..... .+.. .....+++..++| ++||+.||.+|||+.+++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~-~~~~~~~~~~~li-----~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 218 LGTPTEDVWPGVTSLPDYK----NTFPKWKKG-SLRS-AVKNLDEDGLDLL-----EKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hCCCChhhhhcchhhHHHH----hhccccCcc-hhHH-hcCCCCHHHHHHH-----HHHhcCChhhCCCHHHHhcCCCC
Confidence 222211110 000011110 001111000 0000 0012346677888 99999999999999999999997
No 146
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.92 E-value=2.2e-25 Score=227.09 Aligned_cols=185 Identities=24% Similarity=0.275 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCC------------
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILP------------ 70 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~------------ 70 (454)
.++.+++||+.||+|||++||+||||||+|||++.++.+||+|||++..+...........+......
T Consensus 102 ~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (381)
T cd05626 102 LARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVS 181 (381)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccc
Confidence 57889999999999999999999999999999999999999999998643211000000000000000
Q ss_pred ---------CCCCCCc-ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeec
Q psy7309 71 ---------PIDSTAF-YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY 140 (454)
Q Consensus 71 ---------~~~~~~~-~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~ 140 (454)
.+..... ..........+||+.|+|||++. +..|+.++ ||||+ ||++|||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~ell 242 (381)
T cd05626 182 NCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL---RKGYTQLC--DWWSV--------------GVILFEML 242 (381)
T ss_pred ccccccccchhhccccccccccccccccCCccccCHHHHc---CCCCCCcc--ceeeh--------------hhHHHHHH
Confidence 0000000 00011123568999999999997 56788888 99999 99999987
Q ss_pred CCchhhHHHHHHHhhhcCCCCCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcC--C
Q psy7309 141 KDRPKTLEELKHNIRRENGPSTGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLN--H 217 (454)
Q Consensus 141 ~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~--~ 217 (454)
+|.+ |+...........+. ......+|... ..++++.+|| .+||. .
T Consensus 243 tG~~---------------Pf~~~~~~~~~~~i~~~~~~~~~~~~~-----------~~s~~~~dli-----~~ll~~~~ 291 (381)
T cd05626 243 VGQP---------------PFLAPTPTETQLKVINWENTLHIPPQV-----------KLSPEAVDLI-----TKLCCSAE 291 (381)
T ss_pred hCCC---------------CCcCCCHHHHHHHHHccccccCCCCCC-----------CCCHHHHHHH-----HHHccCcc
Confidence 7654 222222111111111 11222233221 1236778888 88554 4
Q ss_pred CCCCCCChhhhhcCcccccC
Q psy7309 218 DPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 218 dP~~Rpta~e~l~hp~f~~~ 237 (454)
+|.+|+|++|++.||||...
T Consensus 292 ~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 292 ERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred cccCCCCHHHHhcCcccCCC
Confidence 55569999999999999853
No 147
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.92 E-value=3.2e-25 Score=221.50 Aligned_cols=172 Identities=20% Similarity=0.329 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 104 ~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--------------------------- 156 (331)
T cd06649 104 ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--------------------------- 156 (331)
T ss_pred HHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc---------------------------
Confidence 5789999999999999986 699999999999999999999999999875421
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh----hHHHHHHHhhhc
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK----TLEELKHNIRRE 157 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~----~~~~l~~~i~~~ 157 (454)
.......||+.|+|||++. +..++.++ ||||+ ||++||+++|+.+ ...++...+...
T Consensus 157 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~tg~~p~~~~~~~~~~~~~~~~ 217 (331)
T cd06649 157 SMANSFVGTRSYMSPERLQ---GTHYSVQS--DIWSM--------------GLSLVELAIGRYPIPPPDAKELEAIFGRP 217 (331)
T ss_pred cccccCCCCcCcCCHhHhc---CCCCCchH--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHhccc
Confidence 1223457999999999998 66788888 99999 9999997776542 122222221110
Q ss_pred CCCCCCc---------------------------hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHH
Q psy7309 158 NGPSTGS---------------------------NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQ 210 (454)
Q Consensus 158 ~~p~~~~---------------------------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~ 210 (454)
....... ........+.....+..+. ...+++..+||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~li---- 281 (331)
T cd06649 218 VVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN------------GVFTPDFQEFV---- 281 (331)
T ss_pred ccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCC------------ccccHHHHHHH----
Confidence 0000000 0000000011111111110 11235667777
Q ss_pred HhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 211 QKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 211 ~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
.+||++||++|||++|+++||||...
T Consensus 282 -~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 282 -NKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred -HHHccCCcccCCCHHHHhcChHHhhc
Confidence 99999999999999999999999853
No 148
>KOG0584|consensus
Probab=99.92 E-value=1.1e-25 Score=229.15 Aligned_cols=158 Identities=31% Similarity=0.417 Sum_probs=125.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccC-CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYE-DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
..++.|++|||.||.|||++. |||||||++|||++.+ |.|||+|+|||+....
T Consensus 143 kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~------------------------ 198 (632)
T KOG0584|consen 143 KAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK------------------------ 198 (632)
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc------------------------
Confidence 358899999999999999986 9999999999999875 7999999999996542
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
....+.+|||.+||||+.- ..|+..+ ||||+ |.++.||.++..
T Consensus 199 ---s~aksvIGTPEFMAPEmYE----E~YnE~V--DVYaF--------------GMCmLEMvT~eY-------------- 241 (632)
T KOG0584|consen 199 ---SHAKSVIGTPEFMAPEMYE----ENYNELV--DVYAF--------------GMCMLEMVTSEY-------------- 241 (632)
T ss_pred ---cccceeccCccccChHHHh----hhcchhh--hhhhh--------------hHHHHHHHhccC--------------
Confidence 2334589999999999986 7899999 99999 999999887554
Q ss_pred CCCCC-chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 159 GPSTG-SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 159 ~p~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
|+.. .+...+.+++..+.+ |..+. +...+++++|| .+||.. .+.|+||.|+|+||||...
T Consensus 242 -PYsEC~n~AQIYKKV~SGiK---P~sl~---------kV~dPevr~fI-----ekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 242 -PYSECTNPAQIYKKVTSGIK---PAALS---------KVKDPEVREFI-----EKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -ChhhhCCHHHHHHHHHcCCC---HHHhh---------ccCCHHHHHHH-----HHHhcC-chhccCHHHHhhChhhccc
Confidence 2222 223334444443332 23322 33458999999 999999 9999999999999999986
Q ss_pred CC
Q psy7309 238 SS 239 (454)
Q Consensus 238 ~~ 239 (454)
..
T Consensus 303 ~g 304 (632)
T KOG0584|consen 303 GG 304 (632)
T ss_pred cc
Confidence 43
No 149
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.92 E-value=1.7e-25 Score=218.61 Aligned_cols=156 Identities=29% Similarity=0.417 Sum_probs=116.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++..... .
T Consensus 102 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~--------------------------~ 155 (285)
T cd05605 102 ERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE--------------------------G 155 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC--------------------------C
Confidence 35788999999999999999999999999999999999999999999874321 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+||+.|+|||++. +..++.++ |+||+ |+++||+++|+. |+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Diws~--------------G~~l~el~~g~~---------------pf 201 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVK---NERYTFSP--DWWGL--------------GCLIYEMIEGKS---------------PF 201 (285)
T ss_pred CccccccCCCCccCcHHhc---CCCCCccc--cchhH--------------HHHHHHHHHCCC---------------CC
Confidence 1223457999999999997 56788888 99999 999999766554 22
Q ss_pred CCchhh----hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCc
Q psy7309 162 TGSNVQ----KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQP 232 (454)
Q Consensus 162 ~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp 232 (454)
.+.... .....+. .....++.. .+....+++ .+||+.||++|| +++++++||
T Consensus 202 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05605 202 RQRKEKVKREEVERRVK-EDQEEYSEK-------------FSEAARSIC-----RQLLTKDPGFRLGCRGEGAEEVKAHP 262 (285)
T ss_pred CCCchhhHHHHHHHHhh-hcccccCcc-------------cCHHHHHHH-----HHHccCCHHHhcCCCCCCHHHHhcCc
Confidence 211111 1111111 112222222 225667888 999999999999 899999999
Q ss_pred cccc
Q psy7309 233 ISLE 236 (454)
Q Consensus 233 ~f~~ 236 (454)
||..
T Consensus 263 ~~~~ 266 (285)
T cd05605 263 FFRT 266 (285)
T ss_pred CccC
Confidence 9985
No 150
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.92 E-value=2.5e-25 Score=224.15 Aligned_cols=188 Identities=28% Similarity=0.351 Sum_probs=122.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++..... .
T Consensus 118 ~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~--------------------------~ 171 (353)
T cd07850 118 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------------------------S 171 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC--------------------------C
Confidence 35788999999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......||+.|+|||++. +..++.++ ||||+ ||++++|++|+.. ........+..
T Consensus 172 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 232 (353)
T cd07850 172 FMMTPYVVTRYYRAPEVIL---GMGYKENV--DIWSV--------------GCIMGEMIRGTVLFPGTDHIDQWNKIIEQ 232 (353)
T ss_pred CCCCCCcccccccCHHHHh---CCCCCCch--hhHhH--------------HHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 1233457899999999997 67788888 99999 8888887665531 12233333333
Q ss_pred cCCCCCCch--hhhhhhhhcc-C---CCCCCCcccccccccccc---ccccccchhHHHHHHHHhhhcCCCCCCCCChhh
Q psy7309 157 ENGPSTGSN--VQKSLQKFQK-S---PPSVYREWRSSFEWSTVR---NNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQ 227 (454)
Q Consensus 157 ~~~p~~~~~--~~~~~~~~~~-~---~~~~~p~~~~~~~~~~~~---~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e 227 (454)
.+.|..... .......+.. . ....+....+...|.... .....+...++| .+||+.||++|||+.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~R~t~~e 307 (353)
T cd07850 233 LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLL-----SKMLVIDPEKRISVDD 307 (353)
T ss_pred cCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHH-----HHHcCCChhhCcCHHH
Confidence 333322100 0000111100 0 000111110000010000 112234566777 9999999999999999
Q ss_pred hhcCcccccCCC
Q psy7309 228 NLCQPISLEGSS 239 (454)
Q Consensus 228 ~l~hp~f~~~~~ 239 (454)
+|.||||.....
T Consensus 308 iL~~~~~~~~~~ 319 (353)
T cd07850 308 ALQHPYINVWYD 319 (353)
T ss_pred HhcChhHhhccC
Confidence 999999985443
No 151
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.92 E-value=1.9e-25 Score=219.71 Aligned_cols=188 Identities=23% Similarity=0.281 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++........ ...
T Consensus 119 ~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~---------------------~~~ 177 (310)
T cd07865 119 SEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKN---------------------SKP 177 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcc---------------------cCC
Confidence 46889999999999999999999999999999999999999999999986532110 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh----HHHHHHHhhhc
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT----LEELKHNIRRE 157 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~----~~~l~~~i~~~ 157 (454)
.......++..|+|||.+.. ...++.++ |+||+ |+++||++++++.. .......+...
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 178 NRYTNRVVTLWYRPPELLLG--ERDYGPPI--DMWGA--------------GCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred CCccCcccCccccCcHHhcC--CcccCchh--hhHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 12234578899999998761 33467777 99999 99999977655411 11111111211
Q ss_pred CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.++.+....... ..+.......++..........+.....++.+.++| .+||..||.+|||++|+++||||
T Consensus 240 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli-----~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 240 CGSITPEVWPGV-DKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLI-----DKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hCCCChhhcccc-cchhhhhhccCCCccchhhHHhcccccCCHHHHHHH-----HHHhcCChhhccCHHHHhcCCCC
Confidence 221111110000 000000001111110000001111112235566777 99999999999999999999998
No 152
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.92 E-value=2.5e-25 Score=225.99 Aligned_cols=164 Identities=24% Similarity=0.296 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|..... ....
T Consensus 143 ~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~------------------------~~~~ 198 (371)
T cd05622 143 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK------------------------EGMV 198 (371)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc------------------------CCcc
Confidence 5678999999999999999999999999999999999999999999875421 1111
Q ss_pred CCcCcccccceeccccccccc-cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGV-KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~-~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.....+||+.|+|||++.... ...|+.++ ||||+ ||++|||++|.+ |+
T Consensus 199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~--DiwSl--------------Gvilyell~G~~---------------Pf 247 (371)
T cd05622 199 RCDTAVGTPDYISPEVLKSQGGDGYYGREC--DWWSV--------------GVFLYEMLVGDT---------------PF 247 (371)
T ss_pred cccCcccCccccCHHHHhccCCCccCCCcc--ceeeh--------------hHHHHHHHhCCC---------------CC
Confidence 234568999999999986321 23477788 99999 999999877654 33
Q ss_pred CCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~~ 237 (454)
...+......++... ....+|.. ...+..+.++| .+||..+|.+ |++++|+++||||...
T Consensus 248 ~~~~~~~~~~~i~~~~~~~~~~~~-----------~~~s~~~~~li-----~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 248 YADSLVGTYSKIMNHKNSLTFPDD-----------NDISKEAKNLI-----CAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CCCCHHHHHHHHHcCCCcccCCCc-----------CCCCHHHHHHH-----HHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 333333333333322 22233332 11236777888 9999844433 7899999999999763
No 153
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.92 E-value=1.6e-25 Score=217.73 Aligned_cols=161 Identities=20% Similarity=0.300 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++..... .
T Consensus 95 ~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~--------------------------~ 148 (277)
T cd05607 95 ERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD--------------------------G 148 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCC--------------------------C
Confidence 35678899999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||++. +..++.++ |+||+ ||++||+++|..+.....
T Consensus 149 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------Gv~l~el~~g~~p~~~~~----------- 198 (277)
T cd05607 149 KTITQRAGTNGYMAPEILK---EEPYSYPV--DWFAM--------------GCSIYEMVAGRTPFKDHK----------- 198 (277)
T ss_pred ceeeccCCCCCccCHHHHc---cCCCCCch--hHHHH--------------HHHHHHHHhCCCCCCCCc-----------
Confidence 1223357899999999987 55688888 99999 999999776654211000
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh----hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS----EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta----~e~l~hp~f~~ 236 (454)
............. .....++. ...++...+++ .+||+.||.+|||+ ++++.||||..
T Consensus 199 ~~~~~~~~~~~~~-~~~~~~~~------------~~~~~~~~~li-----~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 199 EKVAKEELKRRTL-EDEVKFEH------------QNFTEESKDIC-----RLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred chhhHHHHHHHhh-cccccccc------------ccCCHHHHHHH-----HHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 0000001111111 11111111 11236677888 99999999999999 66779999975
No 154
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.91 E-value=2.2e-25 Score=218.76 Aligned_cols=164 Identities=22% Similarity=0.402 Sum_probs=119.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++..... ..
T Consensus 118 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~-------------------------~~ 172 (292)
T cd06658 118 EQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-------------------------EV 172 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccc-------------------------cc
Confidence 46789999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++. +..++.++ |+||+ |++++|+++|.. |+
T Consensus 173 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------Gvil~el~~g~~---------------p~ 218 (292)
T cd06658 173 PKRKSLVGTPYWMAPEVIS---RLPYGTEV--DIWSL--------------GIMVIEMIDGEP---------------PY 218 (292)
T ss_pred ccCceeecCccccCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1223457899999999987 56678778 99999 999999776553 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
........+..+........+.. ...+....+++ .+||..||.+|||++|+++||||.....+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 219 FNEPPLQAMRRIRDNLPPRVKDS-----------HKVSSVLRGFL-----DLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred CCCCHHHHHHHHHhcCCCccccc-----------cccCHHHHHHH-----HHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 22211111222211111111111 11235566777 99999999999999999999999976654
No 155
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.91 E-value=1.8e-25 Score=218.43 Aligned_cols=158 Identities=29% Similarity=0.416 Sum_probs=116.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++..... .
T Consensus 102 ~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~--------------------------~ 155 (285)
T cd05630 102 GRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--------------------------G 155 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC--------------------------C
Confidence 35788999999999999999999999999999999999999999999864311 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++. +..++.++ |+||+ |+++|+|++|+++.
T Consensus 156 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~~l~~l~~g~~Pf--------------- 201 (285)
T cd05630 156 QTIKGRVGTVGYMAPEVVK---NERYTFSP--DWWAL--------------GCLLYEMIAGQSPF--------------- 201 (285)
T ss_pred ccccCCCCCccccChHHHc---CCCCCCcc--ccHHH--------------HHHHHHHHhCCCCC---------------
Confidence 1223457999999999998 56788888 99999 99999977665422
Q ss_pred CCch---hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCcc
Q psy7309 162 TGSN---VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPI 233 (454)
Q Consensus 162 ~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~ 233 (454)
.... .......+.......++.. .++...+|+ ++||+.||.+||| ++|+++|||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 202 QQRKKKIKREEVERLVKEVQEEYSEK-------------FSPDARSLC-----KMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred CCCCccchHHHHHhhhhhhhhhcCcc-------------CCHHHHHHH-----HHHhhcCHHHccCCCCCchHHHHcChh
Confidence 1100 0011111111111112221 225667888 9999999999999 899999999
Q ss_pred cccC
Q psy7309 234 SLEG 237 (454)
Q Consensus 234 f~~~ 237 (454)
|.+.
T Consensus 264 ~~~~ 267 (285)
T cd05630 264 FKQI 267 (285)
T ss_pred hhcc
Confidence 9863
No 156
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.91 E-value=3.8e-25 Score=213.63 Aligned_cols=159 Identities=26% Similarity=0.419 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++..... ...
T Consensus 112 ~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~-------------------------~~~ 166 (272)
T cd06637 112 WIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-------------------------TVG 166 (272)
T ss_pred HHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceeccc-------------------------ccc
Confidence 5678999999999999999999999999999999999999999999875421 112
Q ss_pred CCcCcccccceeccccccccc--cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGV--KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~--~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
......|++.|+|||++.... ...|+.++ |+||+ ||++||+++|..+.
T Consensus 167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~--Dv~sl--------------Gv~l~el~~g~~p~-------------- 216 (272)
T cd06637 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKS--DLWSL--------------GITAIEMAEGAPPL-------------- 216 (272)
T ss_pred cCCcccccccccCHhHhccccCcCCCCCchh--hHHHH--------------HHHHHHHHhCCCCc--------------
Confidence 334567999999999986221 34577778 99999 99999987765422
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
....................+. ...+....+|+ .+||..||.+|||+.|++.||||
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~li-----~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 217 -CDMHPMRALFLIPRNPAPRLKS------------KKWSKKFQSFI-----ESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -cccCHHHHHHHHhcCCCCCCCC------------CCcCHHHHHHH-----HHHcCCChhhCCCHHHHhhCCCC
Confidence 1111111111111111111110 01125566777 99999999999999999999997
No 157
>KOG4236|consensus
Probab=99.91 E-value=1.8e-25 Score=222.43 Aligned_cols=155 Identities=28% Similarity=0.388 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
.+.++.|||.||.|||-+||+|+||||+|||+.... ++||||||.|+.+.+
T Consensus 666 TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-------------------------- 719 (888)
T KOG4236|consen 666 TKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-------------------------- 719 (888)
T ss_pred HHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch--------------------------
Confidence 467889999999999999999999999999998765 699999999998753
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCc-h-hhHHHHHHHhhhcC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDR-P-KTLEELKHNIRREN 158 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~-~-~~~~~l~~~i~~~~ 158 (454)
.....+.+|||.|+|||++. +.+|+.+. ||||+ |+|+|--+.|. | ...+++...|.
T Consensus 720 ksFRrsVVGTPAYLaPEVLr---nkGyNrSL--DMWSV--------------GVIiYVsLSGTFPFNEdEdIndQIQ--- 777 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLR---NKGYNRSL--DMWSV--------------GVIIYVSLSGTFPFNEDEDINDQIQ--- 777 (888)
T ss_pred hhhhhhhcCCccccCHHHHh---hccccccc--cceee--------------eEEEEEEecccccCCCccchhHHhh---
Confidence 44677899999999999999 78999999 99999 99999844433 2 22233333333
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
+...-+|.. +|+.+ ++.+.+|| ..+|+..-.+|.|.++.|.|||++..
T Consensus 778 -----------------NAaFMyPp~----PW~ei-----s~~AidlI-----n~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 778 -----------------NAAFMYPPN----PWSEI-----SPEAIDLI-----NNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred -----------------ccccccCCC----chhhc-----CHHHHHHH-----HHHHHHHHHHhcchHhhccchhhhcc
Confidence 445556665 58654 36677999 99999999999999999999999853
No 158
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.91 E-value=7.6e-25 Score=214.07 Aligned_cols=180 Identities=23% Similarity=0.363 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 103 ~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~-------------------------~~ 157 (291)
T cd07870 103 YNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSI-------------------------PS 157 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCC-------------------------CC
Confidence 35788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh------hHHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK------TLEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~------~~~~l~~~i~ 155 (454)
.......+++.|+|||++.. ...++.++ |+||+ |++++++++|.+. ..+.+.....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 219 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLG--ATDYSSAL--DIWGA--------------GCIFIEMLQGQPAFPGVSDVFEQLEKIWT 219 (291)
T ss_pred CCCCCccccccccCCceeec--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCchhHHHHHHHHHH
Confidence 12234467899999999861 23567777 99999 9999987776542 1223323222
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCcccc---ccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRS---SFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
..+.|..... .............++...+ ...|+.+ ...+...+++ .+||+.||++|||++|++.||
T Consensus 220 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll-----~~~l~~dp~~R~t~~~~l~h~ 289 (291)
T cd07870 220 VLGVPTEDTW--PGVSKLPNYKPEWFLPCKPQQLRVVWKRL---SRPPKAEDLA-----SQMLMMFPKDRISAQDALLHP 289 (291)
T ss_pred HcCCCChhhh--hhhhhcccccchhccccCCcchhhhcccc---CCChHHHHHH-----HHHhCcCcccCcCHHHHhcCC
Confidence 2222322210 0000110000000000000 0012111 1135667888 999999999999999999999
Q ss_pred cc
Q psy7309 233 IS 234 (454)
Q Consensus 233 ~f 234 (454)
||
T Consensus 290 ~~ 291 (291)
T cd07870 290 YF 291 (291)
T ss_pred CC
Confidence 97
No 159
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.91 E-value=3.8e-25 Score=221.21 Aligned_cols=154 Identities=23% Similarity=0.302 Sum_probs=110.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+++.+++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 174 ~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~-----------------------~~~ 230 (338)
T cd05102 174 EDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD-----------------------PDY 230 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccC-----------------------cch
Confidence 357889999999999999999999999999999999999999999999754211 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......+|+.|+|||++. +..|+.++ ||||+ ||++||+++ |.. |
T Consensus 231 ~~~~~~~~~~~y~aPE~~~---~~~~~~~s--Diwsl--------------G~il~el~~~g~~---------------p 276 (338)
T cd05102 231 VRKGSARLPLKWMAPESIF---DKVYTTQS--DVWSF--------------GVLLWEIFSLGAS---------------P 276 (338)
T ss_pred hcccCCCCCccccCcHHhh---cCCCCccc--CHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1122345678899999997 66788888 99999 999999764 432 2
Q ss_pred CCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.... .....+........|.. .++...+++ .+||+.||++|||+.|+++
T Consensus 277 f~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 277 YPGVQINEEFCQRLKDGTRMRAPEN-------------ATPEIYRIM-----LACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCccHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHH
Confidence 2221111 11222222222222222 225667788 9999999999999998875
No 160
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.91 E-value=8.5e-25 Score=218.73 Aligned_cols=191 Identities=27% Similarity=0.366 Sum_probs=122.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++....... ...
T Consensus 106 ~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~----------------------~~~ 163 (336)
T cd07849 106 DHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH----------------------DHT 163 (336)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc----------------------ccc
Confidence 3578899999999999999999999999999999999999999999987542210 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
......+||+.|+|||++.. ...++.++ |+||+ |+++++|++|++.. ...+......
T Consensus 164 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dvwsl--------------Gvil~el~~G~~~f~~~~~~~~~~~~~~~ 225 (336)
T cd07849 164 GFLTEYVATRWYRAPEIMLN--SKGYTKAI--DIWSV--------------GCILAEMLSNRPLFPGKDYLHQLNLILGV 225 (336)
T ss_pred CCcCCcCcCCCccChHHhhC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 12344678999999998751 34577778 99999 99999977766421 1111111111
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
.+.|.. ..................+. .....|+...+. .++.+.+++ .+||+.||++|||+.|+++||||..
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~li-----~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 226 LGTPSQ-EDLNCIISLRARNYIKSLPF-KPKVPWNKLFPN-ADPKALDLL-----DKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred cCCCCH-HHHHHhhchhhhhHHhhcCc-CCcccHHHHhcc-cCcHHHHHH-----HHHcCCChhhCcCHHHHhcCccccc
Confidence 122211 11111100000000000000 001122221111 246677888 9999999999999999999999987
Q ss_pred CCCC
Q psy7309 237 GSSS 240 (454)
Q Consensus 237 ~~~~ 240 (454)
...+
T Consensus 298 ~~~~ 301 (336)
T cd07849 298 YHDP 301 (336)
T ss_pred cCCC
Confidence 6543
No 161
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.91 E-value=5.7e-25 Score=219.79 Aligned_cols=164 Identities=21% Similarity=0.290 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... ....
T Consensus 103 ~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~------------------------~~~~ 158 (332)
T cd05623 103 MARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME------------------------DGTV 158 (332)
T ss_pred HHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheeccc------------------------CCcc
Confidence 5788999999999999999999999999999999999999999999875421 1111
Q ss_pred CCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.....+||+.|+|||++... ....|+.++ ||||+ ||++|||++|+. |
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~--DvwSl--------------Gvil~ell~g~~---------------P 207 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPEC--DWWSL--------------GVCMYEMLYGET---------------P 207 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcC--CEEee--------------HHHHHHHhcCCC---------------C
Confidence 22345799999999998521 134577788 99999 999999877654 3
Q ss_pred CCCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCccccc
Q psy7309 161 STGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLE 236 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~ 236 (454)
+..........++... ....+|... ...++.+.+++ ++||..+|.+ |+|++|+++||||..
T Consensus 208 f~~~~~~~~~~~i~~~~~~~~~p~~~----------~~~s~~~~~li-----~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 208 FYAESLVETYGKIMNHKERFQFPAQV----------TDVSEDAKDLI-----RRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred CCCCCHHHHHHHHhCCCccccCCCcc----------ccCCHHHHHHH-----HHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 3333333333333322 122233321 11236778888 9999765544 689999999999974
No 162
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.91 E-value=3.1e-25 Score=216.69 Aligned_cols=159 Identities=29% Similarity=0.402 Sum_probs=117.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..... .
T Consensus 102 ~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~--------------------------~ 155 (285)
T cd05632 102 ERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE--------------------------G 155 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC--------------------------C
Confidence 46788999999999999999999999999999999999999999998864321 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++. +..++.++ |+||+ |+++|++++|..+ +
T Consensus 156 ~~~~~~~g~~~~~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~g~~P---------------~ 201 (285)
T cd05632 156 ESIRGRVGTVGYMAPEVLN---NQRYTLSP--DYWGL--------------GCLIYEMIEGQSP---------------F 201 (285)
T ss_pred CcccCCCCCcCccChHHhc---CCCCCccc--chHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1223457999999999997 56788888 99999 9999997765532 2
Q ss_pred CCchhh----hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCc
Q psy7309 162 TGSNVQ----KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQP 232 (454)
Q Consensus 162 ~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp 232 (454)
...... ....++. .....++.. .++...+|+ .+||+.||++||| +++++.|+
T Consensus 202 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05632 202 RGRKEKVKREEVDRRVL-ETEEVYSAK-------------FSEEAKSIC-----KMLLTKDPKQRLGCQEEGAGEVKRHP 262 (285)
T ss_pred CCCCHHHHHHHHHHhhh-ccccccCcc-------------CCHHHHHHH-----HHHccCCHhHcCCCcccChHHHHcCh
Confidence 111111 1111111 111112211 225667888 9999999999999 88999999
Q ss_pred ccccCCC
Q psy7309 233 ISLEGSS 239 (454)
Q Consensus 233 ~f~~~~~ 239 (454)
||.....
T Consensus 263 ~~~~~~~ 269 (285)
T cd05632 263 FFRNMNF 269 (285)
T ss_pred hhhcCCH
Confidence 9987543
No 163
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.91 E-value=6.1e-25 Score=210.94 Aligned_cols=158 Identities=25% Similarity=0.371 Sum_probs=115.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++++++|++.||.|||+.||+||||||+||+++.++.++|+|||++....... ....
T Consensus 105 ~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~----------------------~~~~ 162 (263)
T cd06625 105 VTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC----------------------SSGT 162 (263)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc----------------------cccc
Confidence 568899999999999999999999999999999999999999999987542100 0111
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......|+..|+|||++. +..++.++ ||||+ |+++||+++|+.+ +.
T Consensus 163 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~g~~p---------------~~ 208 (263)
T cd06625 163 GMKSVTGTPYWMSPEVIS---GEGYGRKA--DVWSV--------------GCTVVEMLTEKPP---------------WA 208 (263)
T ss_pred cccCCCcCccccCcceec---cCCCCchh--hhHHH--------------HHHHHHHHhCCCC---------------cc
Confidence 123456889999999998 55677788 99999 9999998776542 11
Q ss_pred Cchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 163 GSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 163 ~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.........+.. ......++.. .+....++| ++||..||.+|||+.|+++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 209 EFEAMAAIFKIATQPTNPQLPSH-------------VSPDARNFL-----RRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ccchHHHHHHHhccCCCCCCCcc-------------CCHHHHHHH-----HHHhhcCcccCCCHHHHhhCCCC
Confidence 111111111111 1112222222 225667788 99999999999999999999997
No 164
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.91 E-value=6.7e-25 Score=215.70 Aligned_cols=163 Identities=24% Similarity=0.404 Sum_probs=118.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++..... ..
T Consensus 115 ~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~-------------------------~~ 169 (296)
T cd06655 115 AQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP-------------------------EQ 169 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccc-------------------------cc
Confidence 46789999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. ...++.++ |+||+ ||++|++++|.. |+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------Gvil~~lltg~~---------------pf 215 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVT---RKAYGPKV--DIWSL--------------GIMAIEMVEGEP---------------PY 215 (296)
T ss_pred ccCCCcCCCccccCcchhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1223457899999999987 56677788 99999 999999777654 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
...........+.......+... ...++...++| ++||..||.+|||+.++++||||.....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 216 LNENPLRALYLIATNGTPELQNP-----------EKLSPIFRDFL-----NRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred CCCCHHHHHHHHHhcCCcccCCc-----------ccCCHHHHHHH-----HHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 22111111111111111111110 11225566777 9999999999999999999999986553
No 165
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.91 E-value=5.2e-25 Score=217.40 Aligned_cols=185 Identities=25% Similarity=0.279 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++..... ..
T Consensus 108 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~-------------------------~~ 162 (309)
T cd07845 108 SQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL-------------------------PA 162 (309)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC-------------------------cc
Confidence 46788999999999999999999999999999999999999999999875431 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
...+...+++.|+|||++.. ...++.++ |+||+ |+++||+++|.+.. ...+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dvwsl--------------G~il~el~~g~~~f~~~~~~~~~~~~~~~ 224 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLG--CTTYTTAI--DMWAV--------------GCILAELLAHKPLLPGKSEIEQLDLIIQL 224 (309)
T ss_pred CCCCcccccccccChhhhcC--CCCcCchH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 12233456889999999862 34577788 99999 99999987766421 1222222221
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
...|... .+. .+..........++.... ..+.... ...++...++| .+||+.||++|||++|++.||||..
T Consensus 225 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li-----~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 225 LGTPNES-IWP-GFSDLPLVGKFTLPKQPY-NNLKHKF-PWLSEAGLRLL-----NFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred cCCCChh-hch-hhhcccccccccccCCCC-CchHHhc-cccCHHHHHHH-----HHHhcCChhhCcCHHHHhcChhhcc
Confidence 1222111 000 000000000111111000 0011100 11246667788 9999999999999999999999986
Q ss_pred CC
Q psy7309 237 GS 238 (454)
Q Consensus 237 ~~ 238 (454)
..
T Consensus 296 ~~ 297 (309)
T cd07845 296 KP 297 (309)
T ss_pred CC
Confidence 54
No 166
>KOG4717|consensus
Probab=99.91 E-value=9.9e-25 Score=216.74 Aligned_cols=183 Identities=23% Similarity=0.283 Sum_probs=138.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
-++++|+||+.|+.|+|+..+|||||||+|+.+- .-|-|||.|||++-.+ ..+
T Consensus 119 La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf--------------------------~PG 172 (864)
T KOG4717|consen 119 LAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF--------------------------QPG 172 (864)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC--------------------------CCc
Confidence 4789999999999999999999999999998664 5688999999998755 345
Q ss_pred CCCcCcccccceeccccccccccccccc-cCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQ-FTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~-~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
...++.||+..|.|||+++ +..|+. .+ ||||| |+|+|-+..|++ |
T Consensus 173 ~kL~TsCGSLAYSAPEILL---GDsYDAPAV--DiWSL--------------GVILyMLVCGq~---------------P 218 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILL---GDSYDAPAV--DIWSL--------------GVILYMLVCGQP---------------P 218 (864)
T ss_pred chhhcccchhhccCchhhh---cCccCCcch--hhhHH--------------HHHHHHHHhCCC---------------c
Confidence 6788899999999999999 777775 45 99999 999998655554 4
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
|...+-.+.+-.+- .-++..|..+ +.++++|| .+||..||++|.|.+++..|+|++.+-..
T Consensus 219 FqeANDSETLTmIm-DCKYtvPshv-------------S~eCrdLI-----~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 219 FQEANDSETLTMIM-DCKYTVPSHV-------------SKECRDLI-----QSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred cccccchhhhhhhh-cccccCchhh-------------hHHHHHHH-----HHHHhcCchhhccHHHHhccccccCCCCC
Confidence 44433333333332 3445555553 48889999 99999999999999999999999987665
Q ss_pred CCCccCccccccCCCCCCCCcchHHHHHHHHH
Q psy7309 241 GLSVLGSEQLLTCDHIPPPLVGETVLQDMVRQ 272 (454)
Q Consensus 241 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 272 (454)
.-. .-+++.-.++.+++-..++.+
T Consensus 280 ~sT--------~iPLvsr~~L~ee~Ha~IIq~ 303 (864)
T KOG4717|consen 280 LST--------AIPLVSRHHLPEEAHATIIQQ 303 (864)
T ss_pred ccc--------cCceeehhhCChHHHHHHHHH
Confidence 322 234444445566655555543
No 167
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.91 E-value=9.6e-25 Score=213.57 Aligned_cols=182 Identities=25% Similarity=0.337 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++..... ..
T Consensus 106 ~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~-------------------------~~ 160 (293)
T cd07843 106 SEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS-------------------------PL 160 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccC-------------------------Cc
Confidence 46789999999999999999999999999999999999999999999875432 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......+++.|+|||.+.. ...++.++ |+||+ |+++++|++|.+. ....+...+..
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~--~~~~~~~~--Di~sl--------------G~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLG--AKEYSTAI--DMWSV--------------GCIFAELLTKKPLFPGKSEIDQLNKIFKL 222 (293)
T ss_pred cccccccccccccCchhhcC--Cccccchh--hHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 22234567889999999862 23456777 99999 9999997776542 22222222232
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccc-cccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNI-KSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...|.... +... ..+.......+... ....+....... .++...++| ++||+.||++|||+.|++.||||
T Consensus 223 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li-----~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 223 LGTPTEKI-WPGF-SELPGAKKKTFTKY-PYNQLRKKFPALSLSDNGFDLL-----NRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hCCCchHH-HHHh-hccchhcccccccc-cchhhhccccccCCChHHHHHH-----HHHhccCccccCCHHHHhcCCCC
Confidence 23332211 1100 00000000000000 000011111111 245667888 99999999999999999999998
No 168
>KOG0607|consensus
Probab=99.91 E-value=7.7e-25 Score=206.80 Aligned_cols=179 Identities=27% Similarity=0.406 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC---eEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH---VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~---vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
++.++.++|+.||.|||.+||.||||||+|||-...++ ||||||.++..+..... .+ + .
T Consensus 177 EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~----------~s-p-------a 238 (463)
T KOG0607|consen 177 EASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND----------CS-P-------A 238 (463)
T ss_pred HHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCC----------CC-C-------C
Confidence 68899999999999999999999999999999987765 79999999875422110 00 0 2
Q ss_pred CCCCCcCcccccceecccccc--ccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309 80 HDTSHTGQVGTALYAAPELDS--HGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE 157 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~--~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~ 157 (454)
......+.+|+..|||||+.- -+....|+..+ |.||| |+++|-|+.|-++....
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrC--DlwSL--------------GvIlYImLsGYpPFvG~-------- 294 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRC--DLWSL--------------GVILYIMLSGYPPFVGH-------- 294 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccc--cHHHH--------------HHHHHHHHhCCCCccCc--------
Confidence 234566789999999999963 12356889999 99999 66666655544322110
Q ss_pred CCCCCCch--------hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 158 NGPSTGSN--------VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 158 ~~p~~~~~--------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
.+...+++ ..+.+..++ .+.+.||+. +|..+ +.++++++ ..+|.+||.+|.+|.+++
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~LFesIQ-EGkYeFPdk----dWahI-----S~eakdli-----snLlvrda~~rlsa~~vl 359 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKLFESIQ-EGKYEFPDK----DWAHI-----SSEAKDLI-----SNLLVRDAKQRLSAAQVL 359 (463)
T ss_pred cCCcCCccCCCccHHHHHHHHHHHh-ccCCcCChh----hhHHh-----hHHHHHHH-----HHHHhccHHhhhhhhhcc
Confidence 01111111 122333444 677888876 68654 47778999 999999999999999999
Q ss_pred cCcccccCC
Q psy7309 230 CQPISLEGS 238 (454)
Q Consensus 230 ~hp~f~~~~ 238 (454)
+|||+....
T Consensus 360 nhPw~~~~~ 368 (463)
T KOG0607|consen 360 NHPWVQRCA 368 (463)
T ss_pred CCccccccc
Confidence 999998644
No 169
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.91 E-value=1.1e-24 Score=211.75 Aligned_cols=159 Identities=27% Similarity=0.411 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++..... ...
T Consensus 122 ~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~-------------------------~~~ 176 (282)
T cd06636 122 WIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-------------------------TVG 176 (282)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhc-------------------------ccc
Confidence 4678999999999999999999999999999999999999999999875431 111
Q ss_pred CCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
......|++.|+|||++... ....++.++ |+||+ |+++||++++.++.
T Consensus 177 ~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~--Dvwsl--------------G~~l~el~~g~~p~-------------- 226 (282)
T cd06636 177 RRNTFIGTPYWMAPEVIACDENPDATYDYRS--DIWSL--------------GITAIEMAEGAPPL-------------- 226 (282)
T ss_pred CCCcccccccccCHhhcCcccCcCcCCCccc--chhHH--------------HHHHHHHHhCCCCc--------------
Confidence 23346789999999998622 134677777 99999 99999987765422
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...................... ...+....++| .+||..||.+|||+.|+++||||
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~li-----~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 227 -CDMHPMRALFLIPRNPPPKLKS------------KKWSKKFIDFI-----EGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -cccCHHhhhhhHhhCCCCCCcc------------cccCHHHHHHH-----HHHhCCChhhCcCHHHHhcCCCC
Confidence 1111111111111111111110 11225566777 99999999999999999999997
No 170
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.91 E-value=1.1e-24 Score=217.78 Aligned_cols=165 Identities=21% Similarity=0.282 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+.. ....
T Consensus 103 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------------------------~~~~ 158 (331)
T cd05597 103 MARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA------------------------DGTV 158 (331)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCC------------------------CCCc
Confidence 5788999999999999999999999999999999999999999999875421 0111
Q ss_pred CCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.....+||+.|+|||++... ....++.++ ||||+ ||++|||++|+. |
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~--Diwsl--------------G~~l~el~~g~~---------------P 207 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPEC--DWWSL--------------GVCMYEMLYGET---------------P 207 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcc--eeehh--------------hhHHHHHhhCCC---------------C
Confidence 12235799999999998621 124567777 99999 999999877654 2
Q ss_pred CCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCcccccC
Q psy7309 161 STGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLEG 237 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~~ 237 (454)
+...........+.. .....++.... ..++.+.+++ ++||..++++ |++++++++||||...
T Consensus 208 f~~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~~~~~~li-----~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 208 FYAESLVETYGKIMNHKEHFQFPPDVT----------DVSEEAKDLI-----RRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CCCCCHHHHHHHHHcCCCcccCCCccC----------CCCHHHHHHH-----HHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 222222222222221 11122222211 1236677888 9988764444 7899999999999753
No 171
>KOG0696|consensus
Probab=99.91 E-value=6e-25 Score=213.37 Aligned_cols=171 Identities=29% Similarity=0.365 Sum_probs=142.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.+|+.||-+||++|||.||||.+|||++..|++||+|||+++.-. -.+.
T Consensus 451 ~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni-------------------------~~~~ 505 (683)
T KOG0696|consen 451 VAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-------------------------FDGV 505 (683)
T ss_pred hhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc-------------------------cCCc
Confidence 467789999999999999999999999999999999999999999998421 2344
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+.+|||-|+|||+++ ..+|+.++ |.||+ |+++|||+.|.+ |+.
T Consensus 506 TTkTFCGTPdYiAPEIi~---YqPYgksv--DWWa~--------------GVLLyEmlaGQp---------------PFd 551 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIA---YQPYGKSV--DWWAF--------------GVLLYEMLAGQP---------------PFD 551 (683)
T ss_pred ceeeecCCCcccccceEE---ecccccch--hHHHH--------------HHHHHHHHcCCC---------------CCC
Confidence 566799999999999999 89999999 99999 999999877654 555
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCcccccC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLEG 237 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~~ 237 (454)
+....+.++.+. .....+|+.++ .++.++. +..|...|.+|... +++-.||||.
T Consensus 552 GeDE~elF~aI~-ehnvsyPKslS-------------kEAv~ic-----kg~ltK~P~kRLGcg~~ge~di~~H~FFR-- 610 (683)
T KOG0696|consen 552 GEDEDELFQAIM-EHNVSYPKSLS-------------KEAVAIC-----KGLLTKHPGKRLGCGPEGERDIREHPFFR-- 610 (683)
T ss_pred CCCHHHHHHHHH-HccCcCccccc-------------HHHHHHH-----HHHhhcCCccccCCCCccccchhhCcchh--
Confidence 555555555544 45566777643 7777888 99999999999874 6888999997
Q ss_pred CCCCCCccCccccccCCCCCCC
Q psy7309 238 SSSGLSVLGSEQLLTCDHIPPP 259 (454)
Q Consensus 238 ~~~~~~~~~~~~ll~~~~~~~~ 259 (454)
.+||+.+...+..||.
T Consensus 611 ------~iDWek~E~~eiqPPf 626 (683)
T KOG0696|consen 611 ------RIDWEKLERREIQPPF 626 (683)
T ss_pred ------hccHHHHhhccCCCCC
Confidence 4788888888877774
No 172
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.91 E-value=1.5e-24 Score=212.15 Aligned_cols=165 Identities=26% Similarity=0.356 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++..... ..
T Consensus 110 ~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~-------------------------~~ 164 (292)
T cd06644 110 PQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK-------------------------TL 164 (292)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccc-------------------------cc
Confidence 46789999999999999999999999999999999999999999998864321 11
Q ss_pred CCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.......|++.|+|||++..+ ....|+.++ |+||+ ||++|||++|+++.
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Dv~sl--------------G~il~el~~g~~p~------------- 215 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKA--DIWSL--------------GITLIEMAQIEPPH------------- 215 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchh--hhHhH--------------HHHHHHHhcCCCCC-------------
Confidence 223345788999999998521 134567777 99999 99999987766421
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
..........++.....+..+.. ...+....+++ ++||+.||++||+++|+++||||....
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 216 --HELNPMRVLLKIAKSEPPTLSQP-----------SKWSMEFRDFL-----KTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred --ccccHHHHHHHHhcCCCccCCCC-----------cccCHHHHHHH-----HHHhcCCcccCcCHHHHhcCccccccc
Confidence 11111111222221211111111 11124566777 999999999999999999999997544
No 173
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.91 E-value=1.2e-24 Score=212.62 Aligned_cols=162 Identities=27% Similarity=0.367 Sum_probs=114.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++..... ..
T Consensus 128 ~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~-------------------------~~ 182 (291)
T cd06639 128 AMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS-------------------------TR 182 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccc-------------------------cc
Confidence 35788999999999999999999999999999999999999999999875431 11
Q ss_pred CCCcCcccccceeccccccccc--cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGV--KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~--~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.......|+..|+|||++.... ...++.++ |+||+ ||++||+++|+++
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Di~sl--------------Gvi~~el~~g~~p-------------- 232 (291)
T cd06639 183 LRRNTSVGTPFWMAPEVIACEQQYDYSYDARC--DVWSL--------------GITAIELGDGDPP-------------- 232 (291)
T ss_pred ccccCccCCccccChhhhcCCCCcccccCCcc--chHHH--------------HHHHHHHhhCCCC--------------
Confidence 1123357899999999976221 12356677 99999 9999998877642
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
+........+..+.......+... ........+++ .+||+.||.+|||+.|+++||||+
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 233 -LFDMHPVKTLFKIPRNPPPTLLHP-----------EKWCRSFNHFI-----SQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred -CCCCcHHHHHHHHhcCCCCCCCcc-----------cccCHHHHHHH-----HHHhhcChhhCcCHHHHhcCcccC
Confidence 111111111111211111111100 11124566777 999999999999999999999984
No 174
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.91 E-value=1.4e-24 Score=209.14 Aligned_cols=162 Identities=23% Similarity=0.410 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||.++........ ....
T Consensus 106 ~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------~~~~ 166 (267)
T cd06628 106 TLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLS-------------------TKTN 166 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccccc-------------------CCcc
Confidence 357889999999999999999999999999999999999999999998855311000 0111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. +..++.++ |+||+ |++++++++|.. |+
T Consensus 167 ~~~~~~~~~~~y~~pe~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~---------------p~ 212 (267)
T cd06628 167 GARPSLQGSVFWMAPEVVK---QTSYTRKA--DIWSL--------------GCLVVEMLTGKH---------------PF 212 (267)
T ss_pred ccccccCCCcCccChhHhc---cCCCCchh--hhHHH--------------HHHHHHHhhCCC---------------CC
Confidence 2233456889999999987 56677778 99999 999999877653 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...................++.. ......++| ++||+.||.+|||+.|+++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 213 PDCTQLQAIFKIGENASPEIPSN-------------ISSEAIDFL-----EKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCccHHHHHHHHhccCCCcCCcc-------------cCHHHHHHH-----HHHccCCchhCcCHHHHhhCCCC
Confidence 22221122222221222222222 125667788 99999999999999999999997
No 175
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.91 E-value=1.5e-24 Score=207.24 Aligned_cols=156 Identities=31% Similarity=0.494 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++..... ..
T Consensus 101 ~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~-------------------------~~ 155 (256)
T cd08529 101 DQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD-------------------------NT 155 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccC-------------------------cc
Confidence 35788999999999999999999999999999999999999999999875431 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||++. +..++.++ |+||+ |++++++++|+. |+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~ 201 (256)
T cd08529 156 NFANTIVGTPYYLSPELCE---DKPYNEKS--DVWAL--------------GVVLYECCTGKH---------------PF 201 (256)
T ss_pred chhhccccCccccCHHHhc---CCCCCCcc--chHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1223457889999999988 56678888 99999 999999877653 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+.......+.......++.. ......+++ .+||+.+|++||++.++++|||.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 202 DANNQGALILKIIRGVFPPVSQM-------------YSQQLAQLI-----DQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCCCHHHHHHHHHcCCCCCCccc-------------cCHHHHHHH-----HHHccCCcccCcCHHHHhhCCCC
Confidence 22222222222222222222221 125567787 99999999999999999999984
No 176
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.91 E-value=1.4e-24 Score=210.98 Aligned_cols=183 Identities=28% Similarity=0.385 Sum_probs=118.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++..... ...
T Consensus 99 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~------------------------~~~ 154 (286)
T cd07832 99 AQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSE------------------------EEP 154 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccC------------------------CCC
Confidence 46789999999999999999999999999999999999999999999875431 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......||..|+|||++.. ...++.++ ||||+ |++++|++++.+. ....+...+..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~~l~~l~tg~~~~~~~~~~~~~~~~~~~ 216 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYG--ARKYDPGV--DLWAV--------------GCIFAELLNGSPLFPGENDIEQLAIVFRT 216 (286)
T ss_pred CccccccCcccccCceeeec--cccCCchh--HHHHH--------------HHHHHHHHcCCcCcCCCCHHHHHHHHHHH
Confidence 12334578999999999862 34467777 99999 9999998776542 11222222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
...|... .+.. ......-....++.... ..|....+.. .....++| .+||..||.+|||++++++||||.
T Consensus 217 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~li-----~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 217 LGTPNEE-TWPG-LTSLPDYNKITFPESKP-IPLEEIFPDA-SPEALDLL-----KGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cCCCChH-HHhh-ccCcchhhcccCCCCCc-chHHHhCCCc-cHHHHHHH-----HHHhccChhhCCCHHHHhhCcCcC
Confidence 2222110 0000 00000000111111100 1122111122 25666777 999999999999999999999984
No 177
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.91 E-value=1.2e-24 Score=213.72 Aligned_cols=162 Identities=25% Similarity=0.394 Sum_probs=116.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..... ..
T Consensus 116 ~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~-------------------------~~ 170 (296)
T cd06654 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-------------------------EQ 170 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccc-------------------------cc
Confidence 36788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+. +..++.++ |+||+ ||++|++++|.++ +
T Consensus 171 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~s~--------------Gvil~~l~~g~~p---------------f 216 (296)
T cd06654 171 SKRSTMVGTPYWMAPEVVT---RKAYGPKV--DIWSL--------------GIMAIEMIEGEPP---------------Y 216 (296)
T ss_pred cccCcccCCccccCHHHHc---CCCCCccc--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1223457899999999987 56677788 99999 9999998776542 2
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
....................+.. ........+++ .+||..||++|||+.+++.||||....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~~p~~Rpt~~eil~~~~~~~~~ 277 (296)
T cd06654 217 LNENPLRALYLIATNGTPELQNP-----------EKLSAIFRDFL-----NRCLDMDVEKRGSAKELLQHQFLKIAK 277 (296)
T ss_pred CCCCHHHhHHHHhcCCCCCCCCc-----------cccCHHHHHHH-----HHHCcCCcccCcCHHHHhhChhhhccC
Confidence 22111111111111111111100 11224556677 999999999999999999999998643
No 178
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.91 E-value=1.3e-24 Score=209.40 Aligned_cols=162 Identities=29% Similarity=0.451 Sum_probs=112.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+|+||||+||+++.++.+||+|||++..... ..
T Consensus 106 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~-------------------------~~ 160 (267)
T cd06645 106 SQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITA-------------------------TI 160 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccC-------------------------cc
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++.......++.++ |+||+ ||++|+|+++.++.
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~--DvwSl--------------G~il~~l~~~~~p~--------------- 209 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLC--DIWAV--------------GITAIELAELQPPM--------------- 209 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchh--hhHHH--------------HHHHHHHhcCCCCc---------------
Confidence 123345789999999997532245577777 99999 99999987765421
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
............... ....+....... .+....+++ .+||+.||++|||++++++|||
T Consensus 210 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~li-----~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 210 FDLHPMRALFLMTKS-NFQPPKLKDKMK--------WSNSFHHFV-----KMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ccccchhhHHhhhcc-CCCCCcccccCC--------CCHHHHHHH-----HHHccCCchhCcCHHHHhcCCC
Confidence 111100001111000 011111000001 124556777 9999999999999999999998
No 179
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.91 E-value=2.2e-24 Score=216.54 Aligned_cols=178 Identities=31% Similarity=0.416 Sum_probs=120.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 118 ~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~--------------------------- 170 (343)
T cd07851 118 DHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD--------------------------- 170 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc---------------------------
Confidence 46889999999999999999999999999999999999999999999875421
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
......+|..|+|||++.. ...++.++ |+||+ |+++|++++|++. ....+...+..
T Consensus 171 -~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dvwsl--------------Gv~l~elltg~~pf~~~~~~~~~~~i~~~ 231 (343)
T cd07851 171 -EMTGYVATRWYRAPEIMLN--WMHYNQTV--DIWSV--------------GCIMAELLTGKTLFPGSDHIDQLKRIMNL 231 (343)
T ss_pred -cccCCcccccccCHHHHhC--CCCCCchH--hHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHh
Confidence 1234577889999999862 23567777 99999 9999997776542 12222222222
Q ss_pred cCCCCCCch-------hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 157 ENGPSTGSN-------VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 157 ~~~p~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
...|..... .......+.......+... . ...++.+.++| .+||+.||.+|||+.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~s~~l~dli-----~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 232 VGTPDEELLQKISSESARNYIQSLPQMPKKDFKEV---------F-SGANPLAIDLL-----EKMLVLDPDKRITAAEAL 296 (343)
T ss_pred cCCCCHHHHhhccchhHHHHHHhccccCCCCHHHH---------h-ccCCHHHHHHH-----HHhCCCChhhCCCHHHHh
Confidence 111111000 0000011111111111111 0 01235667777 999999999999999999
Q ss_pred cCcccccCCCC
Q psy7309 230 CQPISLEGSSS 240 (454)
Q Consensus 230 ~hp~f~~~~~~ 240 (454)
+||||.....+
T Consensus 297 ~h~~~~~~~~~ 307 (343)
T cd07851 297 AHPYLAEYHDP 307 (343)
T ss_pred cCCCccccCCC
Confidence 99999976655
No 180
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.90 E-value=1.7e-24 Score=207.93 Aligned_cols=165 Identities=27% Similarity=0.387 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||++........ ....
T Consensus 103 ~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~---------------------~~~~ 161 (267)
T cd06610 103 IIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD---------------------RTRK 161 (267)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc---------------------cccc
Confidence 5788999999999999999999999999999999999999999999986542110 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
.....+|+..|+|||++.. ...++.++ |+||+ |++++++++|..+ +.
T Consensus 162 ~~~~~~~~~~y~~Pe~~~~--~~~~~~~~--Dv~sl--------------G~i~~~l~~g~~p---------------~~ 208 (267)
T cd06610 162 VRKTFVGTPCWMAPEVMEQ--VHGYDFKA--DIWSF--------------GITAIELATGAAP---------------YS 208 (267)
T ss_pred ccccccCChhhcChHHHcc--ccCcCccc--chHhH--------------hHHHHHHHhCCCC---------------cc
Confidence 2344578999999999872 23677788 99999 9999998776542 22
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
..+..+...+........++... .+ ...++...+++ .+||+.||.+|||++|+++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~li-----~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 209 KYPPMKVLMLTLQNDPPSLETGA---DY-----KKYSKSFRKMI-----SLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccChhhhHHHHhcCCCCCcCCcc---cc-----ccccHHHHHHH-----HHHcCCChhhCcCHHHHhhCCCC
Confidence 22222222222222222222221 00 11225566777 99999999999999999999998
No 181
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.90 E-value=1.1e-24 Score=210.81 Aligned_cols=162 Identities=28% Similarity=0.425 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.... ..
T Consensus 98 ~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~-------------------------~~ 152 (274)
T cd06609 98 TYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS-------------------------TM 152 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecc-------------------------cc
Confidence 46889999999999999999999999999999999999999999999976532 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+. +..++.++ ||||+ |+++|++++|.++ +
T Consensus 153 ~~~~~~~~~~~y~~PE~~~---~~~~~~~s--Dv~sl--------------G~il~~l~tg~~p---------------~ 198 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIK---QSGYDEKA--DIWSL--------------GITAIELAKGEPP---------------L 198 (274)
T ss_pred cccccccCCccccChhhhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------c
Confidence 2233457889999999998 55688888 99999 9999998776542 1
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
...........+.....+..+.. ..++...+++ .+||..||.+|||++++++||||.....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l-----~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 199 SDLHPMRVLFLIPKNNPPSLEGN------------KFSKPFKDFV-----SLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred ccCchHHHHHHhhhcCCCCCccc------------ccCHHHHHHH-----HHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 11111112222222222222211 0225566777 9999999999999999999999986543
No 182
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.90 E-value=1.1e-24 Score=209.86 Aligned_cols=161 Identities=26% Similarity=0.384 Sum_probs=115.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||+|+||+++.++.+||+|||++..... ..
T Consensus 113 ~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~-------------------------~~ 167 (275)
T cd06608 113 EWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDS-------------------------TL 167 (275)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceeccc-------------------------ch
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.......||..|+|||++... ....++.++ ||||+ |++++++++|.++
T Consensus 168 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Dv~sl--------------G~il~~l~~g~~p-------------- 217 (275)
T cd06608 168 GRRNTFIGTPYWMAPEVIACDEQPDASYDARS--DVWSL--------------GITAIELADGKPP-------------- 217 (275)
T ss_pred hhhcCccccccccCHhHhcccccccCCccccc--cHHHh--------------HHHHHHHHhCCCC--------------
Confidence 223345789999999997521 134566777 99999 9999998776542
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
+...........+........... ...+....+++ .+||..||++|||++|+++|||+
T Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 218 -LCDMHPMRALFKIPRNPPPTLKSP-----------ENWSKKFNDFI-----SECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred -ccccchHHHHHHhhccCCCCCCch-----------hhcCHHHHHHH-----HHHhhcChhhCcCHHHHhcCCCC
Confidence 211111112222221211111110 11125566777 99999999999999999999996
No 183
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.90 E-value=1.2e-24 Score=208.00 Aligned_cols=158 Identities=27% Similarity=0.425 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++..... ..
T Consensus 99 ~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~-------------------------~~ 153 (256)
T cd06612 99 EEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD-------------------------TM 153 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhccc-------------------------Cc
Confidence 46788999999999999999999999999999999999999999999986532 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||++. +..++.++ ||||+ |++++++++|+++.
T Consensus 154 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~s~--------------G~il~~l~~g~~p~--------------- 199 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQ---EIGYNNKA--DIWSL--------------GITAIEMAEGKPPY--------------- 199 (256)
T ss_pred cccccccCCccccCHHHHh---cCCCCchh--hHHHH--------------HHHHHHHHhCCCCC---------------
Confidence 1223456889999999987 56788888 99999 99999987765421
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...........+.......+... ...+....+++ .+||+.||++|||+.|++.||||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i-----~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 200 SDIHPMRAIFMIPNKPPPTLSDP-----------EKWSPEFNDFV-----KKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CCcchhhhhhhhccCCCCCCCch-----------hhcCHHHHHHH-----HHHHhcChhhCcCHHHHhcCCCC
Confidence 11111111111111111111000 11224566777 99999999999999999999997
No 184
>KOG0197|consensus
Probab=99.90 E-value=1.6e-24 Score=217.92 Aligned_cols=153 Identities=27% Similarity=0.333 Sum_probs=128.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+...++.||++|++||+++++|||||-..|||++.+..+||+|||+|+...+ +..
T Consensus 303 ~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d------------------------~~Y 358 (468)
T KOG0197|consen 303 PQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD------------------------DEY 358 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCC------------------------Cce
Confidence 46778999999999999999999999999999999999999999999995432 122
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....+..-...|.|||.+. ...++.++ ||||+ |++++|+++. ...|+
T Consensus 359 ~~~~~~kfPIkWtAPEa~~---~~~FS~kS--DVWSF--------------GVlL~E~fT~--------------G~~py 405 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALN---YGKFSSKS--DVWSF--------------GVLLWELFTY--------------GRVPY 405 (468)
T ss_pred eecCCCCCCceecCHHHHh---hCCccccc--ceeeh--------------hhhHHHHhcc--------------CCCCC
Confidence 2233334456799999999 77899998 99999 9999998762 34578
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
.+....+.+..+.++.+..-|..++ ++..+++ ..||..+|++|||.+.+.
T Consensus 406 ~~msn~ev~~~le~GyRlp~P~~CP-------------~~vY~lM-----~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 406 PGMSNEEVLELLERGYRLPRPEGCP-------------DEVYELM-----KSCWHEDPEDRPTFETLR 455 (468)
T ss_pred CCCCHHHHHHHHhccCcCCCCCCCC-------------HHHHHHH-----HHHhhCCcccCCCHHHHH
Confidence 8889999999999888888888764 6777888 999999999999998443
No 185
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.90 E-value=2e-24 Score=210.90 Aligned_cols=163 Identities=22% Similarity=0.399 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++++.++.|++.||+|||++||+||||||+||+++.++.++|+|||.+..... ..
T Consensus 115 ~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~-------------------------~~ 169 (285)
T cd06648 115 EQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK-------------------------EV 169 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhcc-------------------------CC
Confidence 46788999999999999999999999999999999999999999998875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||++. +..++.++ |+||+ |++++++++|..+ +
T Consensus 170 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------Gv~l~ell~g~~p---------------~ 215 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVIS---RLPYGTEV--DIWSL--------------GIMVIEMVDGEPP---------------Y 215 (285)
T ss_pred cccccccCCccccCHHHhc---CCCCCCcc--cHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1223457899999999987 56688888 99999 9999997776542 1
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
...+......++........... ...+....+++ .+||+.||++|||+.++++||||.....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 216 FNEPPLQAMKRIRDNLPPKLKNL-----------HKVSPRLRSFL-----DRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred cCCCHHHHHHHHHhcCCCCCccc-----------ccCCHHHHHHH-----HHHcccChhhCcCHHHHccCcccccCCC
Confidence 11111112222221211111111 11225566777 9999999999999999999999987553
No 186
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.90 E-value=1.9e-24 Score=215.91 Aligned_cols=164 Identities=20% Similarity=0.253 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..... ....
T Consensus 103 ~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~------------------------~~~~ 158 (331)
T cd05624 103 MARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ------------------------DGTV 158 (331)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccC------------------------CCce
Confidence 5778999999999999999999999999999999999999999999875421 0111
Q ss_pred CCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.....+||+.|+|||++... ....++.++ ||||+ ||++|||++|+. |
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~--DiwSl--------------Gvil~ell~g~~---------------P 207 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPEC--DWWSL--------------GVCMYEMLYGET---------------P 207 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcc--cEEee--------------ehhhhhhhhCCC---------------C
Confidence 12335799999999998621 114567777 99999 999999887654 3
Q ss_pred CCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCccccc
Q psy7309 161 STGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLE 236 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~ 236 (454)
+...+......++.. .....+|.... ..++.+.+++ .+||..++++ |++++++++||||..
T Consensus 208 f~~~~~~~~~~~i~~~~~~~~~p~~~~----------~~~~~~~~li-----~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 208 FYAESLVETYGKIMNHEERFQFPSHIT----------DVSEEAKDLI-----QRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred ccCCCHHHHHHHHHcCCCcccCCCccc----------cCCHHHHHHH-----HHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 333222223333221 12223333221 1236778888 9999876654 568999999999974
No 187
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.90 E-value=1.9e-24 Score=216.00 Aligned_cols=189 Identities=28% Similarity=0.380 Sum_probs=125.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++........ ...
T Consensus 107 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------~~~ 165 (334)
T cd07855 107 EHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT---------------------EHK 165 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc---------------------CCC
Confidence 46889999999999999999999999999999999999999999999875432100 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
......+||..|+|||++.. ...++.++ |+||+ |+++||+++|++.. ...+......
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~--~~~~~~~~--Di~sl--------------G~~l~el~~g~~pf~~~~~~~~~~~~~~~ 227 (334)
T cd07855 166 YFMTEYVATRWYRAPELLLS--LPEYTTAI--DMWSV--------------GCIFAEMLGRRQLFPGKNYVHQLKLILSV 227 (334)
T ss_pred cccccccccccccChHHhcC--Cccccccc--chHHH--------------HHHHHHHHcCCCccCCCChHHHHHHHHHH
Confidence 22334588999999999862 24577788 99999 99999987766522 1222222222
Q ss_pred cCCCCCCch---hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 157 ENGPSTGSN---VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 157 ~~~p~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
.+.|..... .......... .++.. ....|+.+.+. .++...++| ++||+.||.+|||+++++.|||
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~-~~~~~~~li-----~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 228 LGSPSEEVLNRIGSDRVRKYIQ----NLPRK-QPVPWSKIFPK-ASPEALDLL-----SQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred hCCChhHhhhhhchhhHHHHHh----hcccC-CCCCHHHHccc-CCHHHHHHH-----HHHccCChhhCcCHHHHHhChh
Confidence 222221110 0000111000 01110 01223322222 246778888 9999999999999999999999
Q ss_pred cccCCCC
Q psy7309 234 SLEGSSS 240 (454)
Q Consensus 234 f~~~~~~ 240 (454)
|.....+
T Consensus 297 ~~~~~~~ 303 (334)
T cd07855 297 LAQYHDP 303 (334)
T ss_pred hhhccCC
Confidence 9876654
No 188
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.90 E-value=1.6e-24 Score=213.02 Aligned_cols=162 Identities=24% Similarity=0.446 Sum_probs=118.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++..... ..
T Consensus 117 ~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~-------------------------~~ 171 (297)
T cd06659 117 EQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-------------------------DV 171 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccc-------------------------cc
Confidence 45788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||++. +..++.++ |+||+ |++++||++|.++ +
T Consensus 172 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~el~~g~~p---------------~ 217 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVIS---RTPYGTEV--DIWSL--------------GIMVIEMVDGEPP---------------Y 217 (297)
T ss_pred ccccceecCccccCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 2233467899999999987 56678888 99999 9999998776542 1
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
...........+........... ...+....++| .+||+.||.+|||++++++||||.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~i-----~~~l~~~P~~Rps~~~ll~~~~~~~~~ 278 (297)
T cd06659 218 FSDSPVQAMKRLRDSPPPKLKNA-----------HKISPVLRDFL-----ERMLTREPQERATAQELLDHPFLLQTG 278 (297)
T ss_pred CCCCHHHHHHHHhccCCCCcccc-----------CCCCHHHHHHH-----HHHhcCCcccCcCHHHHhhChhhccCC
Confidence 11111111122211111111100 11225566777 999999999999999999999998654
No 189
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.90 E-value=1.8e-24 Score=210.04 Aligned_cols=164 Identities=27% Similarity=0.412 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..... ..
T Consensus 103 ~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~-------------------------~~ 157 (280)
T cd06611 103 PQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS-------------------------TL 157 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcc-------------------------cc
Confidence 46889999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.......||+.|+|||++..+ ....++.++ |+||+ |+++|++++|++
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~s--Di~sl--------------G~il~~l~~g~~--------------- 206 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKA--DIWSL--------------GITLIELAQMEP--------------- 206 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccc--cHHHH--------------HHHHHHHHhCCC---------------
Confidence 223345789999999997521 134566677 99999 999999877654
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
|+...........+.....+.+... ...+....+++ .+||+.||.+|||++++++||||...
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 207 PHHELNPMRVLLKILKSEPPTLDQP-----------SKWSSSFNDFL-----KSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred CcccCCHHHHHHHHhcCCCCCcCCc-----------ccCCHHHHHHH-----HHHhccChhhCcCHHHHhcChhhccc
Confidence 2222222222223322222221111 11125566787 99999999999999999999999853
No 190
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.90 E-value=2.6e-24 Score=209.47 Aligned_cols=160 Identities=28% Similarity=0.413 Sum_probs=113.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||+++|+||||||+||+++.++.+||+|||++..... ...
T Consensus 125 ~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~-------------------------~~~ 179 (286)
T cd06638 125 IIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS-------------------------TRL 179 (286)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeeccc-------------------------CCC
Confidence 4778999999999999999999999999999999999999999999875421 111
Q ss_pred CCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
......||+.|+|||++... ....|+.++ |+||+ ||++||++++..+
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Dv~sl--------------Gvi~~el~~g~~p--------------- 228 (286)
T cd06638 180 RRNTSVGTPFWMAPEVIACEQQLDSTYDARC--DVWSL--------------GITAIELGDGDPP--------------- 228 (286)
T ss_pred ccccccCCCcccChhhhchhhhccccccchh--hhhhH--------------HHHHHHHhcCCCC---------------
Confidence 23345789999999998521 134577778 99999 9999998776542
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
+...........+........... ...+....+++ .+||+.||.+|||+.|+++|+||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 229 LADLHPMRALFKIPRNPPPTLHQP-----------ELWSNEFNDFI-----RKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CCCCchhHHHhhccccCCCcccCC-----------CCcCHHHHHHH-----HHHccCCcccCCCHHHHhhcccC
Confidence 111111111111111111111000 11124566777 99999999999999999999997
No 191
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.90 E-value=1.8e-24 Score=210.91 Aligned_cols=165 Identities=25% Similarity=0.347 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++..... .
T Consensus 108 ~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~--------------------------~ 161 (288)
T cd06616 108 ILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD--------------------------S 161 (288)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc--------------------------C
Confidence 578899999999999997 4999999999999999999999999999975531 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++....+..++.++ ||||+ |+++|++++|+++....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~p~~~~------------ 213 (288)
T cd06616 162 IAKTRDAGCRPYMAPERIDPSARDGYDVRS--DVWSL--------------GITLYEVATGKFPYPKW------------ 213 (288)
T ss_pred CccccccCccCccCHHHhccccccCCcchh--hhhHH--------------HHHHHHHHhCCCCchhc------------
Confidence 122334688999999998732123678888 99999 99999987766432110
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
........+......+.++... . ...+..+.+|+ .+||+.||++|||++++++||||...
T Consensus 214 --~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~l~~li-----~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 214 --NSVFDQLTQVVKGDPPILSNSE---E------REFSPSFVNFI-----NLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred --chHHHHHhhhcCCCCCcCCCcC---C------CccCHHHHHHH-----HHHccCChhhCcCHHHHhcChhhhch
Confidence 0000111111111222222110 0 11235667777 99999999999999999999999753
No 192
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.90 E-value=5.8e-24 Score=210.70 Aligned_cols=193 Identities=22% Similarity=0.318 Sum_probs=135.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 121 ~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~---------------------------- 172 (313)
T cd06633 121 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS---------------------------- 172 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC----------------------------
Confidence 3567899999999999999999999999999999999999999999875321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......|+..|+|||++.......++.++ |+||+ |+++|++++|.+ |+
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~s--Dv~sl--------------Gvil~el~~g~~---------------p~ 220 (313)
T cd06633 173 -PANSFVGTPYWMAPEVILAMDEGQYDGKV--DVWSL--------------GITCIELAERKP---------------PL 220 (313)
T ss_pred -CCCCccccccccChhhccccCCCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 12245788999999998522235577777 99999 999999877654 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSG 241 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~ 241 (454)
.................+..+.. ..+....+++ .+||+.+|.+|||+.+++.||||......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~li-----~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~- 282 (313)
T cd06633 221 FNMNAMSALYHIAQNDSPTLQSN------------EWTDSFRGFV-----DYCLQKIPQERPASAELLRHDFVRRDRPA- 282 (313)
T ss_pred CCCChHHHHHHHHhcCCCCCCcc------------ccCHHHHHHH-----HHHccCChhhCcCHHHHhcCcccCCCchh-
Confidence 22221122222211111111111 1124466777 99999999999999999999999854321
Q ss_pred CCccCccccccCCCCCCCCcchHHHHHHHHHHhcCCCChhHHHHHHHHhC
Q psy7309 242 LSVLGSEQLLTCDHIPPPLVGETVLQDMVRQTLSNPQSKGYKYLVAACFN 291 (454)
Q Consensus 242 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~f~ 291 (454)
.+. .+..+..++.+.+.+...|+++.+.+|.
T Consensus 283 ------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (313)
T cd06633 283 ------------------RVL-IDLIQRTKDAVRELDNLQYRKMKKILFQ 313 (313)
T ss_pred ------------------HHH-HHHHHHHHHHHhhhhHHHHHHHHHHhcC
Confidence 112 2333335557778888999999888874
No 193
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.90 E-value=9.8e-25 Score=207.39 Aligned_cols=148 Identities=24% Similarity=0.377 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|+++||+|||++||+||||||+||+++.++.++|+|||.+.....
T Consensus 85 ~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~--------------------------- 137 (237)
T cd05576 85 ECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED--------------------------- 137 (237)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc---------------------------
Confidence 45788999999999999999999999999999999999999999998764321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||.+. ...++.++ |+||+ |+++||+++|...... .|.
T Consensus 138 -~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~el~~g~~~~~~----------~~~ 187 (237)
T cd05576 138 -SCDGEAVENMYCAPEVGG---ISEETEAC--DWWSL--------------GAILFELLTGKTLVEC----------HPS 187 (237)
T ss_pred -ccccCCcCccccCCcccC---CCCCCchh--hHHHH--------------HHHHHHHHHCcchhhc----------Cch
Confidence 112335577899999987 56677788 99999 9999998776532100 000
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f 234 (454)
. ........+|.. .++...++| .+||+.||++|||+ +|+++||||
T Consensus 188 ~----------~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 188 G----------INTHTTLNIPEW-------------VSEEARSLL-----QQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred h----------cccccccCCccc-------------CCHHHHHHH-----HHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 0 000011112222 236677888 99999999999996 999999997
No 194
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.90 E-value=9.7e-25 Score=218.33 Aligned_cols=95 Identities=27% Similarity=0.477 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 104 ~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~--------------------------- 156 (333)
T cd06650 104 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--------------------------- 156 (333)
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh---------------------------
Confidence 5678999999999999975 799999999999999999999999999875421
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCc
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDR 143 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~ 143 (454)
.......||..|+|||++. +..++.++ |+||+ ||++|++++|+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~~l~~g~ 199 (333)
T cd06650 157 SMANSFVGTRSYMSPERLQ---GTHYSVQS--DIWSM--------------GLSLVEMAIGR 199 (333)
T ss_pred hccccCCCCccccCHHHhc---CCCCCcHH--HHHHH--------------HHHHHHHHHCC
Confidence 1123357899999999987 56788888 99999 99999976654
No 195
>KOG0612|consensus
Probab=99.90 E-value=9.5e-25 Score=233.78 Aligned_cols=162 Identities=25% Similarity=0.318 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
-++.++.+|+.||.-||+.|+|||||||+|||+|..|++||+|||.+..+.. .+..
T Consensus 176 ~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~------------------------dG~V 231 (1317)
T KOG0612|consen 176 WARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA------------------------DGTV 231 (1317)
T ss_pred HHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCC------------------------CCcE
Confidence 4789999999999999999999999999999999999999999999987653 2334
Q ss_pred CCcCcccccceeccccccc-ccc-ccccccCCccccchhhhHHHHHHHHHhcceeeeeec-CCchhhHHHHHHHhhhcCC
Q psy7309 83 SHTGQVGTALYAAPELDSH-GVK-AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY-KDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~-~~~-~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~-~~~~~~~~~l~~~i~~~~~ 159 (454)
.....+|||-|.|||++.. +.+ +.|+..| |+||+ ||++|||+ +..|+..+.+
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ec--DwWSl--------------GV~~YEMlyG~TPFYadsl--------- 286 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGDGKGEYGREC--DWWSL--------------GVFMYEMLYGETPFYADSL--------- 286 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcCCccccCCcc--chhhh--------------HHHHHHHHcCCCcchHHHH---------
Confidence 4556799999999999863 333 7899999 99999 99999954 4334333333
Q ss_pred CCCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC---hhhhhcCcccc
Q psy7309 160 PSTGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS---SEQNLCQPISL 235 (454)
Q Consensus 160 p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt---a~e~l~hp~f~ 235 (454)
..+..++- ......||... ..++.+++|| ++++ .+|..|.+ ++++..||||.
T Consensus 287 -------veTY~KIm~hk~~l~FP~~~-----------~VSeeakdLI-----~~ll-~~~e~RLgrngiedik~HpFF~ 342 (1317)
T KOG0612|consen 287 -------VETYGKIMNHKESLSFPDET-----------DVSEEAKDLI-----EALL-CDREVRLGRNGIEDIKNHPFFE 342 (1317)
T ss_pred -------HHHHHHHhchhhhcCCCccc-----------ccCHHHHHHH-----HHHh-cChhhhcccccHHHHHhCcccc
Confidence 33333322 13445666432 2568899999 7655 78999999 99999999998
Q ss_pred cC
Q psy7309 236 EG 237 (454)
Q Consensus 236 ~~ 237 (454)
..
T Consensus 343 g~ 344 (1317)
T KOG0612|consen 343 GI 344 (1317)
T ss_pred CC
Confidence 53
No 196
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.90 E-value=2.2e-24 Score=209.78 Aligned_cols=179 Identities=28% Similarity=0.385 Sum_probs=116.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++..... ..
T Consensus 100 ~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~-------------------------~~ 154 (284)
T cd07860 100 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-------------------------PV 154 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhccc-------------------------Cc
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~ 156 (454)
.......+++.|+|||++.. ...++.++ |+||+ |+++|++++|+. .....+.+.+..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~il~~l~tg~~p~~~~~~~~~~~~~~~~ 216 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLG--CKYYSTAV--DIWSL--------------GCIFAEMVTRRALFPGDSEIDQLFRIFRT 216 (284)
T ss_pred cccccccccccccCCeEEec--CCCCCcHH--HHHHH--------------HHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 12234467889999998761 23356677 99999 999999777654 122233333332
Q ss_pred cCCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.+.|..... ........ ...++.+.. -.++... ...++...++| .+||+.||++|||++++++||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~-~~~~~~~~~li-----~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 217 LGTPDEVVWPGVTSLPDY----KPSFPKWAR-QDFSKVV-PPLDEDGRDLL-----SQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hCCCChhhhhhhhHHHHH----Hhhcccccc-cCHHHHc-ccCCHHHHHHH-----HHhcCCCcccCCCHHHHhcCCCC
Confidence 222221100 00000000 001111100 0000110 11235566788 99999999999999999999998
No 197
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.90 E-value=2e-24 Score=210.05 Aligned_cols=165 Identities=26% Similarity=0.358 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||+|||+.||+|+||||+|||++.++.+||+|||++..... .
T Consensus 96 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~---------------------------~ 148 (279)
T cd06619 96 VLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN---------------------------S 148 (279)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc---------------------------c
Confidence 5678999999999999999999999999999999999999999999875421 1
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
.....+||..|+|||++. +..++.++ |+||+ |+++|++++|..+...... ...
T Consensus 149 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~~l~~l~~g~~pf~~~~~--------~~~ 201 (279)
T cd06619 149 IAKTYVGTNAYMAPERIS---GEQYGIHS--DVWSL--------------GISFMELALGRFPYPQIQK--------NQG 201 (279)
T ss_pred cccCCCCChhhcCceeec---CCCCCCcc--hHHHH--------------HHHHHHHHhCCCCchhhcc--------ccc
Confidence 233468999999999998 56788888 99999 9999997776543211000 000
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
..........+........+. ...++...+++ .+||+.||.+||+++|++.||||....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~li-----~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 202 SLMPLQLLQCIVDEDPPVLPV------------GQFSEKFVHFI-----TQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ccchHHHHHHHhccCCCCCCC------------CcCCHHHHHHH-----HHHhhCChhhCCCHHHHhcCccccccc
Confidence 000001111111111111111 11225667777 999999999999999999999998653
No 198
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=8.5e-25 Score=242.64 Aligned_cols=181 Identities=17% Similarity=0.202 Sum_probs=112.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCC-C---CCC---
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILP-P---IDS--- 74 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~-~---~~~--- 74 (454)
.+++.+++||+.||+|||++||+||||||+|||++..+.+|++|||++........... ...+.-.+ . ...
T Consensus 80 ~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~--ki~DfG~a~~~~~~~~~~~ 157 (793)
T PLN00181 80 FECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATT--KSREIGSSRREEILSERRI 157 (793)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcc--cccccccccccccccccch
Confidence 36889999999999999999999999999999998777777777766643211100000 00000000 0 000
Q ss_pred -----CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHH
Q psy7309 75 -----TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEE 149 (454)
Q Consensus 75 -----~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~ 149 (454)
.............+||+.|||||++. +..|+.++ ||||+ ||++|||+++.+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~s--DVwSl--------------GviL~ELl~~~~~~~~~ 218 (793)
T PLN00181 158 EKLEEVKKQPFPMKQILAMEMSWYTSPEEDN---GSSSNCAS--DVYRL--------------GVLLFELFCPVSSREEK 218 (793)
T ss_pred hhhhccccCCCcccccccCCCcceEChhhhc---cCCCCchh--hhhhH--------------HHHHHHHhhCCCchhhH
Confidence 00000011122357999999999988 67788888 99999 99999987755432211
Q ss_pred HHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 150 LKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 150 l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
. . ....+... .+|.... ...+....++ .+||+.||.+|||+.|++
T Consensus 219 ~-~----------------~~~~~~~~---~~~~~~~----------~~~~~~~~~~-----~~~L~~~P~~Rps~~eil 263 (793)
T PLN00181 219 S-R----------------TMSSLRHR---VLPPQIL----------LNWPKEASFC-----LWLLHPEPSCRPSMSELL 263 (793)
T ss_pred H-H----------------HHHHHHHh---hcChhhh----------hcCHHHHHHH-----HHhCCCChhhCcChHHHh
Confidence 0 0 00000000 0111100 0013344666 899999999999999999
Q ss_pred cCcccccCC
Q psy7309 230 CQPISLEGS 238 (454)
Q Consensus 230 ~hp~f~~~~ 238 (454)
+||||.+..
T Consensus 264 ~h~~~~~~~ 272 (793)
T PLN00181 264 QSEFINEPR 272 (793)
T ss_pred hchhhhhhh
Confidence 999998643
No 199
>KOG4721|consensus
Probab=99.90 E-value=1.2e-24 Score=218.34 Aligned_cols=152 Identities=28% Similarity=0.343 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
...|..+|+.|++|||.+.|||||||.-||||..+..|||+|||.++.+.. ...
T Consensus 214 lv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~--------------------------~ST 267 (904)
T KOG4721|consen 214 LVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD--------------------------KST 267 (904)
T ss_pred HHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh--------------------------hhh
Confidence 567899999999999999999999999999999999999999999987642 234
Q ss_pred CcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCC
Q psy7309 84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTG 163 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~ 163 (454)
..+++||..|||||++. +.+.+.++ ||||+ |+++|||+++..+..+--...|....+
T Consensus 268 kMSFaGTVaWMAPEvIr---nePcsEKV--DIwSf--------------GVVLWEmLT~EiPYkdVdssAIIwGVG---- 324 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIR---NEPCSEKV--DIWSF--------------GVVLWEMLTGEIPYKDVDSSAIIWGVG---- 324 (904)
T ss_pred hhhhhhhHhhhCHHHhh---cCCccccc--ceehh--------------HHHHHHHHhcCCCccccchheeEEecc----
Confidence 56789999999999999 88999999 99999 999999988765322211111110000
Q ss_pred chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 164 SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
.+.-....|..++ ...+-|| +.||+-.|..|||++|+|.|-
T Consensus 325 ----------sNsL~LpvPstcP-------------~GfklL~-----Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 325 ----------SNSLHLPVPSTCP-------------DGFKLLL-----KQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred ----------CCcccccCcccCc-------------hHHHHHH-----HHHHhcCCCCCccHHHHHHHH
Confidence 0011122233221 3333444 999999999999999999984
No 200
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.90 E-value=3.9e-24 Score=213.01 Aligned_cols=187 Identities=27% Similarity=0.358 Sum_probs=123.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+|+||||+|||++.++.++|+|||++....... ...
T Consensus 103 ~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~----------------------~~~ 160 (330)
T cd07834 103 DHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE----------------------DEK 160 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc----------------------ccc
Confidence 3578899999999999999999999999999999999999999999998543210 001
Q ss_pred CCCcCcccccceeccccccccccc-cccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKA-MYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~-~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~ 155 (454)
.......+|+.|+|||++. +. .++.++ |+||+ |++++++++|.+. ....+...+.
T Consensus 161 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~s--Di~sl--------------G~il~~l~~g~~pf~~~~~~~~~~~i~~ 221 (330)
T cd07834 161 GFLTEYVVTRWYRAPELLL---SSSRYTKAI--DIWSV--------------GCIFAELLTRKPLFPGRDYIDQLNLIVE 221 (330)
T ss_pred ccccccccccCcCCceeee---cccCCCcch--hHHHH--------------HHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence 2234457899999999987 34 677777 99999 9999998776652 1222222222
Q ss_pred hcCCCCCCchh---hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 156 RENGPSTGSNV---QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 156 ~~~~p~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
..+.|...... ......+.... +. .....|....+. .++.+.++| .+||+.||.+|||+++++.||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~-~~~~~~~li-----~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 222 VLGTPSEEDLKFITSEKARNYLKSL----PK-KPKKPLSKLFPG-ASPEAIDLL-----EKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred hcCCCChhHhhhccccchhhHHhhc----cc-CCcchhHHhccc-CCHHHHHHH-----HHHccCChhhCCCHHHHHhCc
Confidence 22222211100 00000000000 00 000122222112 236677888 999999999999999999999
Q ss_pred ccccCCCC
Q psy7309 233 ISLEGSSS 240 (454)
Q Consensus 233 ~f~~~~~~ 240 (454)
||.....+
T Consensus 291 ~~~~~~~~ 298 (330)
T cd07834 291 YLAQLHDP 298 (330)
T ss_pred cHHhhccc
Confidence 99876554
No 201
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.90 E-value=9.2e-24 Score=208.38 Aligned_cols=192 Identities=23% Similarity=0.344 Sum_probs=130.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 115 ~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~---------------------------- 166 (307)
T cd06607 115 VEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS---------------------------- 166 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC----------------------------
Confidence 3577899999999999999999999999999999999999999999886431
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......|++.|+|||++.......++.++ ||||+ |+++||+++|.++ +
T Consensus 167 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~s--Dv~s~--------------G~il~el~tg~~p---------------~ 214 (307)
T cd06607 167 -PANSFVGTPYWMAPEVILAMDEGQYDGKV--DVWSL--------------GITCIELAERKPP---------------L 214 (307)
T ss_pred -CCCCccCCccccCceeeeccCCCCCCccc--chHHH--------------HHHHHHHHcCCCC---------------C
Confidence 11234678899999997522245577778 99999 9999998776542 1
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSG 241 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~ 241 (454)
...........+.....+..+.. .| +....++| .+||..||++|||+.+++.||||.....+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~----~~--------~~~~~~li-----~~~l~~~p~~Rp~~~~il~~~~~~~~~~~- 276 (307)
T cd06607 215 FNMNAMSALYHIAQNDSPTLSSN----DW--------SDYFRNFV-----DSCLQKIPQDRPSSEELLKHRFVLRERPP- 276 (307)
T ss_pred CCccHHHHHHHHhcCCCCCCCch----hh--------CHHHHHHH-----HHHhcCChhhCcCHHHHhcChhhcccCCc-
Confidence 11111111111111222221111 11 24566777 99999999999999999999999854321
Q ss_pred CCccCccccccCCCCCCCCcchHHHHHHHHHHhcCCCChhHHHHHHHHh
Q psy7309 242 LSVLGSEQLLTCDHIPPPLVGETVLQDMVRQTLSNPQSKGYKYLVAACF 290 (454)
Q Consensus 242 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~f 290 (454)
....+.....+.....-+.-.|+.+.+.+|
T Consensus 277 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (307)
T cd06607 277 -------------------TVIIDLIQRTKDAVRELDNLQYRKMKKILF 306 (307)
T ss_pred -------------------HHHHHHHHHHHHHhhhccccchhHHHHHhc
Confidence 011222233333444445556777777666
No 202
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.90 E-value=2.3e-24 Score=210.79 Aligned_cols=180 Identities=26% Similarity=0.369 Sum_probs=115.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++..+.. .
T Consensus 110 ~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~-------------------------~ 164 (295)
T cd07837 110 KTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSI-------------------------P 164 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCC-------------------------C
Confidence 467889999999999999999999999999999998 88999999999875421 1
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhh
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIR 155 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~ 155 (454)
....+...+++.|+|||++.. ...++.++ |+||+ |+++|+|++|.+. ....+...+.
T Consensus 165 ~~~~~~~~~~~~~~aPE~~~~--~~~~~~~~--Di~sl--------------G~~l~~l~~g~~~~~~~~~~~~~~~~~~ 226 (295)
T cd07837 165 VKSYTHEIVTLWYRAPEVLLG--STHYSTPV--DIWSV--------------GCIFAEMSRKQPLFPGDSELQQLLHIFK 226 (295)
T ss_pred ccccCCcccccCCCChHHhhC--CCCCCchH--HHHHH--------------HHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 112234467889999999861 34567778 99999 9999997776542 2222222222
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
....|.... +.... .. .....++...+ ....... ...++.+.++| .+||..||.+|||++|++.||||.
T Consensus 227 ~~~~~~~~~-~~~~~-~~--~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i-----~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 227 LLGTPTEQV-WPGVS-KL--RDWHEFPQWKP-QDLSRAV-PDLSPEGLDLL-----QKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HhCCCChhh-Ccchh-hc--cchhhcCcccc-hhHHHhc-cccCHHHHHHH-----HHHccCChhhcCCHHHHhcCCCcC
Confidence 111111100 00000 00 00000000000 0000000 11236667788 999999999999999999999984
No 203
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.90 E-value=1.7e-24 Score=210.99 Aligned_cols=158 Identities=25% Similarity=0.329 Sum_probs=115.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 97 ~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~--------------------------- 149 (279)
T cd05633 97 KEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK--------------------------- 149 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccc---------------------------
Confidence 46788999999999999999999999999999999999999999999864321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++.. +..++.++ |+||+ ||++|++++|..+ +
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~~l~~l~~g~~p---------------f 196 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQK--GTAYDSSA--DWFSL--------------GCMLFKLLRGHSP---------------F 196 (279)
T ss_pred cCccCcCCCcCccCHHHhcC--CCCCCchh--hhHHH--------------HHHHHHHHhCCCC---------------c
Confidence 11223478999999999862 34577788 99999 9999997776542 1
Q ss_pred CCch--hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccc
Q psy7309 162 TGSN--VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f 234 (454)
.... ...............++.. .++...++| ++||..||++|| |++|+++||||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~R~~~~~~~~~~~~~h~~~ 258 (279)
T cd05633 197 RQHKTKDKHEIDRMTLTVNVELPDS-------------FSPELKSLL-----EGLLQRDVSKRLGCLGRGAQEVKEHVFF 258 (279)
T ss_pred CCCCCcCHHHHHHHhhcCCcCCccc-------------cCHHHHHHH-----HHHhcCCHHHhcCCCCCCHHHHHhCccc
Confidence 1100 0011111111112222222 236677888 999999999999 69999999999
Q ss_pred ccC
Q psy7309 235 LEG 237 (454)
Q Consensus 235 ~~~ 237 (454)
...
T Consensus 259 ~~~ 261 (279)
T cd05633 259 KGI 261 (279)
T ss_pred cCC
Confidence 863
No 204
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.90 E-value=4.7e-24 Score=214.02 Aligned_cols=179 Identities=31% Similarity=0.386 Sum_probs=119.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus 117 ~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~---------------------------- 168 (342)
T cd07879 117 DKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD---------------------------- 168 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC----------------------------
Confidence 4678899999999999999999999999999999999999999999986431
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......||+.|+|||++.. ...++.++ |+||+ |++++||++|+.. ....+...+..
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------Gvil~el~~g~~pf~~~~~~~~~~~~~~~ 230 (342)
T cd07879 169 AEMTGYVVTRWYRAPEVILN--WMHYNQTV--DIWSV--------------GCIMAEMLTGKTLFKGKDYLDQLTQILKV 230 (342)
T ss_pred CCCCCceeeecccChhhhcC--ccccCchH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 12234578999999999862 24577778 99999 9999997766542 12223222222
Q ss_pred cCCCCCCchhhhhh-----hhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 157 ENGPSTGSNVQKSL-----QKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 157 ~~~p~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.+.|.. ...... ..+.... ...+. ..+....+. .++.+.++| .+||+.||.+|||++|++.|
T Consensus 231 ~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~-~~~~~~~li-----~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 231 TGVPGP--EFVQKLEDKAAKSYIKSL-PKYPR----KDFSTLFPK-ASPQAVDLL-----EKMLELDVDKRLTATEALEH 297 (342)
T ss_pred cCCCCH--HHHHHhcccchHHHHhhc-CCccc----chHHHHhcC-CCHHHHHHH-----HHHcCCChhhCcCHHHHhcC
Confidence 111111 010000 0000000 01110 011111111 235566777 99999999999999999999
Q ss_pred cccccCCC
Q psy7309 232 PISLEGSS 239 (454)
Q Consensus 232 p~f~~~~~ 239 (454)
|||.....
T Consensus 298 ~~f~~~~~ 305 (342)
T cd07879 298 PYFDSFRD 305 (342)
T ss_pred cchhhccc
Confidence 99987654
No 205
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.90 E-value=2e-24 Score=209.93 Aligned_cols=154 Identities=20% Similarity=0.249 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++...... ....
T Consensus 125 ~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~-----------------------~~~~ 181 (283)
T cd05048 125 DFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSA-----------------------DYYR 181 (283)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccc-----------------------cccc
Confidence 56789999999999999999999999999999999999999999998754210 0111
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+|+.|+|||.+. +..++.++ ||||+ ||++||+++ |.. |+
T Consensus 182 ~~~~~~~~~~y~aPE~~~---~~~~~~~s--Dv~sl--------------G~il~el~~~g~~---------------p~ 227 (283)
T cd05048 182 VQSKSLLPVRWMPPEAIL---YGKFTTES--DIWSF--------------GVVLWEIFSYGLQ---------------PY 227 (283)
T ss_pred ccCCCcccccccCHHHhc---cCcCchhh--hHHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 223446788999999987 56788888 99999 999999765 332 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.+....+....+........+... +....+++ .+||+.||.+|||++|++++
T Consensus 228 ~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~~~~l~-----~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 228 YGFSNQEVIEMIRSRQLLPCPEDC-------------PARVYALM-----IECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCCCHHHHHHHHHcCCcCCCcccC-------------CHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence 222223333333323222223221 26677888 99999999999999988863
No 206
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.90 E-value=3.3e-24 Score=208.69 Aligned_cols=159 Identities=25% Similarity=0.355 Sum_probs=116.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~--------------------------- 149 (278)
T cd05606 97 AEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK--------------------------- 149 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCc---------------------------
Confidence 46889999999999999999999999999999999999999999999874321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++.. +..++.++ |+||+ |++++++++|+.+ +
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~s~--------------G~~l~~l~~g~~p---------------~ 196 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQK--GVAYDSSA--DWFSL--------------GCMLFKLLRGHSP---------------F 196 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcC--CCCCCccc--chHhH--------------HHHHHHHHhCCCC---------------C
Confidence 11123478999999999862 33578888 99999 9999998776542 1
Q ss_pred CCchh--hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccc
Q psy7309 162 TGSNV--QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f 234 (454)
..... ..............+|.. .+....+++ .+||..||.+|| ++.++++||||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~s~~~~~li-----~~~l~~~p~~R~~~~~~~~~~ll~~~~~ 258 (278)
T cd05606 197 RQHKTKDKHEIDRMTLTMAVELPDS-------------FSPELRSLL-----EGLLQRDVNRRLGCLGRGAQEVKEHPFF 258 (278)
T ss_pred CCCCccchHHHHHHhhccCCCCCCc-------------CCHHHHHHH-----HHHhhcCHHhccCCCCCCHHHHHhCccc
Confidence 11100 000011111112222222 236777888 999999999999 99999999999
Q ss_pred ccCC
Q psy7309 235 LEGS 238 (454)
Q Consensus 235 ~~~~ 238 (454)
....
T Consensus 259 ~~~~ 262 (278)
T cd05606 259 RSLD 262 (278)
T ss_pred cCCC
Confidence 8644
No 207
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.90 E-value=3.7e-24 Score=207.63 Aligned_cols=176 Identities=26% Similarity=0.350 Sum_probs=115.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.|++.||+|||++|++||||||+||+++. +.+||+|||++..... .
T Consensus 100 ~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~--------------------------~ 152 (282)
T cd07831 100 KRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS--------------------------K 152 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccccccc--------------------------C
Confidence 468899999999999999999999999999999999 9999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
.......+|..|+|||.+.. ...++.++ |+||+ ||++||++++.++. .+.+......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------Gv~l~el~~~~~p~~~~~~~~~~~~~~~~ 214 (282)
T cd07831 153 PPYTEYISTRWYRAPECLLT--DGYYGPKM--DIWAV--------------GCVFFEILSLFPLFPGTNELDQIAKIHDV 214 (282)
T ss_pred CCcCCCCCCcccCChhHhhc--CCCCCcch--hHHHH--------------HHHHHHHHcCCcCCCCCCHHHHHHHHHHH
Confidence 11233567899999998752 34467777 99999 99999977654311 1111111111
Q ss_pred cCCCCCCchhhhhhhhhcc--CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQK--SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.+.+.. .. ...+.. .....++...... ..... ...+....++| .+||+.||++|||++++++||||
T Consensus 215 ~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~li-----~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 215 LGTPDA-EV----LKKFRKSRHMNYNFPSKKGTG-LRKLL-PNASAEGLDLL-----KKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cCCCCH-HH----HHhhcccccccccCccccccc-HHHHc-ccccHHHHHHH-----HHHhccCcccccCHHHHhhCCCC
Confidence 111111 11 111111 1111222211100 00000 12246677777 99999999999999999999997
No 208
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.90 E-value=2.8e-24 Score=210.62 Aligned_cols=185 Identities=24% Similarity=0.263 Sum_probs=119.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++..... ..
T Consensus 102 ~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~-------------------------~~ 156 (298)
T cd07841 102 ADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS-------------------------PN 156 (298)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC-------------------------CC
Confidence 46789999999999999999999999999999999999999999999875431 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......+++.|+|||.+.. ...++.++ |+||+ ||+++|++++.+. ..+.+......
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~il~e~~~g~~~~~~~~~~~~~~~~~~~ 218 (298)
T cd07841 157 RKMTHQVVTRWYRAPELLFG--ARHYGVGV--DMWSV--------------GCIFAELLLRVPFLPGDSDIDQLGKIFEA 218 (298)
T ss_pred ccccccccceeeeCHHHHhC--CCCCCcHH--HHHHH--------------HHHHHHHHcCCccccCCccHHHHHHHHHH
Confidence 22334467889999998751 34567778 99999 9999997776542 11222222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
...|.... .... .............. ....... ...+..+.+++ .+||+.||++|||+.|++.||||..
T Consensus 219 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~li-----~~~l~~~P~~R~s~~e~l~~~~~~~ 287 (298)
T cd07841 219 LGTPTEEN-WPGV-TSLPDYVEFKPFPP---TPLKQIF-PAASDDALDLL-----QRLLTLNPNKRITARQALEHPYFSN 287 (298)
T ss_pred cCCCchhh-hhhc-ccccccccccccCC---cchhhhc-ccccHHHHHHH-----HHHhcCCcccCcCHHHHhhCccccC
Confidence 11221110 0000 00000000000000 0011111 11235566777 9999999999999999999999997
Q ss_pred CCCC
Q psy7309 237 GSSS 240 (454)
Q Consensus 237 ~~~~ 240 (454)
...+
T Consensus 288 ~~~~ 291 (298)
T cd07841 288 DPAP 291 (298)
T ss_pred CCCC
Confidence 6543
No 209
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.90 E-value=4.2e-24 Score=208.67 Aligned_cols=182 Identities=21% Similarity=0.290 Sum_probs=114.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.... ..
T Consensus 103 ~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------------------------~~ 157 (291)
T cd07844 103 HNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSV-------------------------PS 157 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCC-------------------------CC
Confidence 46889999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh------hHHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK------TLEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~------~~~~l~~~i~ 155 (454)
.......++..|+|||++.. ...++.++ ||||+ |+++|+|++|.+. ..+.+.....
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~--~~~~~~~~--Dv~sl--------------G~il~~l~~g~~~~~~~~~~~~~~~~~~~ 219 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLG--STEYSTSL--DMWGV--------------GCIFYEMATGRPLFPGSTDVEDQLHKIFR 219 (291)
T ss_pred ccccccccccccCCcHHhhc--CcccCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence 11223457889999999861 24577778 99999 9988887665542 2222322222
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCcccc-ccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRS-SFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
....|.... +........ .....++.... ... +............+++ .+||+.||++|||+.|++.||||
T Consensus 220 ~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li-----~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 220 VLGTPTEET-WPGVSSNPE-FKPYSFPFYPPRPLI-NHAPRLDRIPHGEELA-----LKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hcCCCChhh-hhhhhhccc-cccccccccCChhHH-HhCcCCCCchhHHHHH-----HHHhccCcccccCHHHHhcCCCC
Confidence 222222211 110000000 00000000000 000 0000000114556777 99999999999999999999998
No 210
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.90 E-value=3.2e-24 Score=208.47 Aligned_cols=182 Identities=24% Similarity=0.274 Sum_probs=115.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++..... ..
T Consensus 100 ~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------------~~ 154 (286)
T cd07847 100 HLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG-------------------------PG 154 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCC-------------------------Cc
Confidence 45789999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......++..|+|||++.. ...++.++ |+||+ |++++++++|.++ ..+.+......
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~--~~~~~~~~--Di~sl--------------G~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVG--DTQYGPPV--DVWAI--------------GCVFAELLTGQPLWPGKSDVDQLYLIRKT 216 (286)
T ss_pred ccccCcccccccCCHHHHhC--CCCcCchh--hhHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 12334568899999999761 34577778 99999 9999998776542 11222111110
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...-.. ........-........|.......+.... ...+....+|+ .+||+.||++|||+.|++.||||
T Consensus 217 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li-----~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 217 LGDLIP--RHQQIFSTNQFFKGLSIPEPETREPLESKF-PNISSPALSFL-----KGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred hCCCCh--HHhhhcccccccccccCCCcccccCHHHHh-ccCCHHHHHHH-----HHHhcCCccccCCHHHHhcCCCC
Confidence 000000 000000000000000011110000011001 11235566777 99999999999999999999998
No 211
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.90 E-value=5e-24 Score=207.34 Aligned_cols=183 Identities=24% Similarity=0.331 Sum_probs=118.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++..... ...
T Consensus 100 ~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~------------------------~~~ 155 (288)
T cd07833 100 DAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA------------------------RPA 155 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCC------------------------Ccc
Confidence 46789999999999999999999999999999999999999999999886532 111
Q ss_pred CCCcCcccccceeccccccccccc-cccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKA-MYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~-~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~ 155 (454)
......+++..|+|||++. .. .++.++ |+||+ |++++++++|++.. .+.+.....
T Consensus 156 ~~~~~~~~~~~~~~PE~~~---~~~~~~~~~--Dv~sl--------------G~~l~~l~~g~~~~~~~~~~~~~~~~~~ 216 (288)
T cd07833 156 SPLTDYVATRWYRAPELLV---GDTNYGKPV--DVWAI--------------GCIMAELLDGEPLFPGDSDIDQLYLIQK 216 (288)
T ss_pred ccccCcccccCCcCCchhc---CCCCcCchh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 1234467889999999987 34 677788 99999 99999977765421 111111111
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
..++..... ......-.......++.......+........++...+++ ++||..||++|||++++++||||
T Consensus 217 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 217 -CLGPLPPSH-QELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFL-----KACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred -HhCCCCHHH-hhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHH-----HHHhccCchhcccHHHHhcCCCC
Confidence 111111000 0000000000000111111001111111122346677888 99999999999999999999998
No 212
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.90 E-value=4.5e-24 Score=207.32 Aligned_cols=164 Identities=23% Similarity=0.315 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 103 ~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~-------------------------- 156 (283)
T cd06617 103 DILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD-------------------------- 156 (283)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccc--------------------------
Confidence 35789999999999999997 999999999999999999999999999875421
Q ss_pred CCCCcCcccccceecccccccccc-ccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVK-AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~-~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
....+...|+..|+|||++..... ..++.++ |+||+ ||++|+|++|+.+.
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~--Di~sl--------------G~~l~~l~~g~~p~------------- 207 (283)
T cd06617 157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKS--DVWSL--------------GITMIELATGRFPY------------- 207 (283)
T ss_pred ccccccccCCccccChhhcCCcccccccCccc--cchhh--------------HHHHHHHHhCCCCC-------------
Confidence 112233578899999998862212 4567777 99999 99999987765421
Q ss_pred CCCCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 160 PSTGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 160 p~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
... .....+..........++.. ..+....++| .+||..||.+|||++++++||||....
T Consensus 208 --~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~li-----~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 208 --DSWKTPFQQLKQVVEEPSPQLPAE------------KFSPEFQDFV-----NKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred --CccccCHHHHHHHHhcCCCCCCcc------------ccCHHHHHHH-----HHHccCChhhCcCHHHHhcCchhhhcc
Confidence 110 00111111111222222221 1225566777 999999999999999999999999754
Q ss_pred C
Q psy7309 239 S 239 (454)
Q Consensus 239 ~ 239 (454)
.
T Consensus 269 ~ 269 (283)
T cd06617 269 S 269 (283)
T ss_pred c
Confidence 4
No 213
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.90 E-value=2.3e-24 Score=211.86 Aligned_cols=162 Identities=25% Similarity=0.420 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++..... ..
T Consensus 115 ~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~-------------------------~~ 169 (297)
T cd06656 115 GQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-------------------------EQ 169 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC-------------------------Cc
Confidence 35778999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+. +..++.++ |+||+ |+++|++++|.+ |+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------Gvil~~l~tg~~---------------pf 215 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVT---RKAYGPKV--DIWSL--------------GIMAIEMVEGEP---------------PY 215 (297)
T ss_pred cCcCcccCCccccCHHHHc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1223457899999999987 56677788 99999 999999877654 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
.................+... .. ........+++ .+||..||++|||++++++||||....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~li-----~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 216 LNENPLRALYLIATNGTPELQ-NP----------ERLSAVFRDFL-----NRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred CCCCcchheeeeccCCCCCCC-Cc----------cccCHHHHHHH-----HHHccCChhhCcCHHHHhcCchhcccc
Confidence 111111111111111111100 00 11224556777 999999999999999999999998544
No 214
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.90 E-value=4.3e-24 Score=207.52 Aligned_cols=176 Identities=28% Similarity=0.390 Sum_probs=115.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++..... .
T Consensus 107 ~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~--------------------------~ 160 (287)
T cd07838 107 ETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF--------------------------E 160 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC--------------------------C
Confidence 46789999999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
.......++..|+|||++. +..++.++ |+||+ ||++|+|+++.+.. .+.+...+..
T Consensus 161 ~~~~~~~~~~~~~~PE~~~---~~~~~~~~--Di~s~--------------G~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07838 161 MALTSVVVTLWYRAPEVLL---QSSYATPV--DMWSV--------------GCIFAELFRRRPLFRGTSEADQLDKIFDV 221 (287)
T ss_pred cccccccccccccChHHhc---cCCCCCcc--hhhhH--------------HHHHHHHHhCCCcccCCChHHHHHHHHHH
Confidence 1223346788999999987 56678888 99999 99999987765421 1112111111
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+........ .......++.... ..+.... ...++...+++ .+||+.||.+|||++|++.||||
T Consensus 222 ~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li-----~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 222 IGLPSEEEWPRN-----VSLPRSSFPSYTP-RSFKSFV-PEICEEGLDLL-----KKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cCCCChHhcCCC-----cccchhhcccccc-cchhhhh-hhhhHHHHHHH-----HHHhccCCccCCCHHHHhcCcCC
Confidence 111100000000 0000000010000 0000000 11235556777 99999999999999999999997
No 215
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.90 E-value=6.1e-24 Score=212.71 Aligned_cols=180 Identities=27% Similarity=0.381 Sum_probs=119.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++..... ..
T Consensus 108 ~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~-------------------------~~ 162 (337)
T cd07858 108 DHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE-------------------------KG 162 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC-------------------------Cc
Confidence 46788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
.......||..|+|||++.. ...++.++ |+||+ ||++|++++|++.. ...+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~l~~g~~pf~~~~~~~~~~~~~~~ 224 (337)
T cd07858 163 DFMTEYVVTRWYRAPELLLN--CSEYTTAI--DVWSV--------------GCIFAELLGRKPLFPGKDYVHQLKLITEL 224 (337)
T ss_pred ccccccccccCccChHHHhc--CCCCCCcc--cHHHH--------------HHHHHHHHcCCCCCCCCChHHHHHHHHHH
Confidence 22334578899999999862 23477777 99999 99999977765421 1111111111
Q ss_pred cCCCCCCc-------hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 157 ENGPSTGS-------NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 157 ~~~p~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
.+.+.... ................+.. .. ...++.+.++| ++||+.||++|||++|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~li-----~~~l~~~P~~Rps~~ell 289 (337)
T cd07858 225 LGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFAR---------LF-PHANPLAIDLL-----EKMLVFDPSKRITVEEAL 289 (337)
T ss_pred hCCCChHHhhhcCchhhhHHHHhcCcccccCHHH---------Hc-ccCCHHHHHHH-----HHHhcCChhhccCHHHHH
Confidence 11111110 0111111111111111110 00 12236667888 999999999999999999
Q ss_pred cCcccccCCC
Q psy7309 230 CQPISLEGSS 239 (454)
Q Consensus 230 ~hp~f~~~~~ 239 (454)
+||||.....
T Consensus 290 ~h~~~~~~~~ 299 (337)
T cd07858 290 AHPYLASLHD 299 (337)
T ss_pred cCcchhhhcC
Confidence 9999986543
No 216
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.90 E-value=3.3e-24 Score=208.63 Aligned_cols=153 Identities=19% Similarity=0.253 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 125 ~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~~ 181 (283)
T cd05091 125 DFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAA-----------------------DYYK 181 (283)
T ss_pred HHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccc-----------------------hhee
Confidence 46789999999999999999999999999999999999999999998754211 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+++.|+|||.+. ...++.++ ||||+ ||+++||++ +.+ |+
T Consensus 182 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~~l~el~~~g~~---------------p~ 227 (283)
T cd05091 182 LMGNSLLPIRWMSPEAIM---YGKFSIDS--DIWSY--------------GVVLWEVFSYGLQ---------------PY 227 (283)
T ss_pred eccCccCCccccCHHHHh---cCCCCcch--hHHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 123345678999999987 56678888 99999 999999765 332 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+.........+........+... .....+++ .+||+.||.+|||+++++.
T Consensus 228 ~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~~~~li-----~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 228 CGYSNQDVIEMIRNRQVLPCPDDC-------------PAWVYTLM-----LECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCC-------------CHHHHHHH-----HHHhCCCcccCCCHHHHHH
Confidence 222233333333333333333332 25566777 9999999999999998875
No 217
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.90 E-value=4.2e-24 Score=212.89 Aligned_cols=108 Identities=17% Similarity=0.251 Sum_probs=80.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.++++|||.+......... .....
T Consensus 101 ~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~------------------~~~~~ 162 (327)
T cd08227 101 LAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR------------------LRVVH 162 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc------------------ccccc
Confidence 357889999999999999999999999999999999999999999976543210000 00001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
.......++..|+|||++... ...|+.++ ||||+ ||+++|+++|..
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Diwsl--------------G~il~el~~g~~ 208 (327)
T cd08227 163 DFPKYSVKVLPWLSPEVLQQN-LQGYDAKS--DIYSV--------------GITACELANGHV 208 (327)
T ss_pred cccccccceecccChHHhhcc-cCCCCchh--hHHHH--------------HHHHHHHHHCCC
Confidence 112234678889999998721 24578888 99999 999999776654
No 218
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.90 E-value=5.1e-24 Score=203.53 Aligned_cols=155 Identities=32% Similarity=0.423 Sum_probs=114.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..+++++.|++.||+|||++|++|+||||+||+++.++ .+||+|||.+.....
T Consensus 101 ~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~-------------------------- 154 (256)
T cd08220 101 DTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS-------------------------- 154 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC--------------------------
Confidence 35788999999999999999999999999999998655 579999999875421
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
........|+..|+|||.+. ...++.++ |+||+ |++++++++++. |
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~~l~~l~~~~~---------------~ 200 (256)
T cd08220 155 KSKAYTVVGTPCYISPELCE---GKPYNQKS--DIWAL--------------GCVLYELASLKR---------------A 200 (256)
T ss_pred CccccccccCCcccCchhcc---CCCCCccc--chHHH--------------HHHHHHHHhCCC---------------C
Confidence 11222357899999999987 55677778 99999 999999776543 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
+...+...............++.. .++...+++ .+||..||.+|||+.|+++||||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 201 FEAANLPALVLKIMSGTFAPISDR-------------YSPDLRQLI-----LSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred cccCchHHHHHHHHhcCCCCCCCC-------------cCHHHHHHH-----HHHccCChhhCCCHHHHhhCCCC
Confidence 222222222222222222222222 226677888 99999999999999999999996
No 219
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.90 E-value=4e-24 Score=204.70 Aligned_cols=156 Identities=34% Similarity=0.492 Sum_probs=116.3
Q ss_pred hhHHHHHHHHHHHHHHHH-----HcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIH-----SQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA 76 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH-----~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (454)
+.++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++.....
T Consensus 105 ~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~---------------------- 162 (265)
T cd08217 105 EFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH---------------------- 162 (265)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC----------------------
Confidence 467899999999999999 89999999999999999999999999999885531
Q ss_pred cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309 77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR 156 (454)
Q Consensus 77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~ 156 (454)
.........|++.|+|||++. ...++.++ |+||+ |++++++++|..
T Consensus 163 ---~~~~~~~~~~~~~~~~pE~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~------------ 208 (265)
T cd08217 163 ---DSSFAKTYVGTPYYMSPEQLN---HMSYDEKS--DIWSL--------------GCLIYELCALSP------------ 208 (265)
T ss_pred ---CcccccccccCCCccChhhhc---CCCCCchh--HHHHH--------------HHHHHHHHHCCC------------
Confidence 111133457899999999987 55677788 99999 999999776543
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
|+...........+.......++.. .+....+++ .+||+.||++|||+.++++|||+
T Consensus 209 ---p~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~-----~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 209 ---PFTARNQLQLASKIKEGKFRRIPYR-------------YSSELNEVI-----KSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ---cccCcCHHHHHHHHhcCCCCCCccc-------------cCHHHHHHH-----HHHccCCcccCCCHHHHhhCCCC
Confidence 2222222222222222222222222 125667787 99999999999999999999995
No 220
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.90 E-value=6e-24 Score=210.02 Aligned_cols=194 Identities=18% Similarity=0.230 Sum_probs=116.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..+++|++.||+|||++||+||||||+||+++.++.+||+|||.+.......... .....
T Consensus 102 ~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------------~~~~~ 163 (314)
T cd08216 102 AIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------------RVVHD 163 (314)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc------------------ccccc
Confidence 467899999999999999999999999999999999999999999987543210000 01111
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhhc
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRRE 157 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~~ 157 (454)
......++..|+|||++... ...|+.++ |+||+ ||+++|+++|..+. ...+...+...
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Diws~--------------G~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQN-LQGYNEKS--DIYSV--------------GITACELANGHVPFKDMPATQMLLEKVRGT 226 (314)
T ss_pred ccccccccccccCHHHhcCC-CCCCCcch--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence 22445678899999998621 23577777 99999 99999977655421 11111111100
Q ss_pred CCCCCC-chhhhhhhhhccCC-CCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 158 NGPSTG-SNVQKSLQKFQKSP-PSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 158 ~~p~~~-~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
...... .............. ....+.. ...++.......+....+++ .+||+.||++|||++|+|+||||.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li-----~~~l~~~P~~Rpt~~~ll~~p~~~ 299 (314)
T cd08216 227 VPCLLDKSTYPLYEDSMSQSRSSNEHPNN--RDSVDHPYTRTFSEHFHQFV-----ELCLQRDPESRPSASQLLNHSFFK 299 (314)
T ss_pred CccccccCchhhhcCCcCcccccccccch--hhhhhcchhhHHHHHHHHHH-----HHHhhcCCCcCcCHHHHhcCchHh
Confidence 000000 00000000000000 0000000 00011111112224556677 999999999999999999999998
Q ss_pred cCC
Q psy7309 236 EGS 238 (454)
Q Consensus 236 ~~~ 238 (454)
...
T Consensus 300 ~~~ 302 (314)
T cd08216 300 QCK 302 (314)
T ss_pred hhc
Confidence 654
No 221
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.89 E-value=3.9e-24 Score=204.72 Aligned_cols=155 Identities=23% Similarity=0.356 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..... ...
T Consensus 102 ~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~-------------------------~~~ 156 (256)
T cd08218 102 QILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS-------------------------TVE 156 (256)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc-------------------------chh
Confidence 5688999999999999999999999999999999999999999999875421 011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......|++.|+|||++. +..++.++ |+||+ |++++++++|... +.
T Consensus 157 ~~~~~~~~~~~~~pe~~~---~~~~~~~~--Dv~sl--------------G~i~~~l~~g~~~---------------~~ 202 (256)
T cd08218 157 LARTCIGTPYYLSPEICE---NRPYNNKS--DIWAL--------------GCVLYEMCTLKHA---------------FE 202 (256)
T ss_pred hhhhccCCccccCHHHhC---CCCCCCcc--chhHH--------------HHHHHHHHcCCCC---------------cc
Confidence 122356889999999987 56677777 99999 9999997776542 22
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
..........+........+.. .+....++| .+||+.+|.+||++.++++||||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 203 AGNMKNLVLKIIRGSYPPVSSH-------------YSYDLRNLV-----SQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CCCHHHHHHHHhcCCCCCCccc-------------CCHHHHHHH-----HHHhhCChhhCcCHHHHhhCcCC
Confidence 2222222222222222222222 125667888 99999999999999999999997
No 222
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.89 E-value=4.8e-25 Score=210.92 Aligned_cols=163 Identities=31% Similarity=0.424 Sum_probs=112.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.+||++||+|+||||+||+++.++.++|+|||.+.... ...
T Consensus 98 ~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-------------------------~~~ 152 (260)
T PF00069_consen 98 EEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-------------------------ENN 152 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-------------------------STT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-------------------------ccc
Confidence 4688999999999999999999999999999999999999999999987431 122
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......+|..|+|||++. ....++.++ |+||+ |+++++|+++.. |+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~~--Di~sl--------------G~il~~l~~~~~---------------p~ 199 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQ--QGKKYTRKS--DIWSL--------------GIILYELLTGKL---------------PF 199 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHT--TTSSBSTHH--HHHHH--------------HHHHHHHHHSSS---------------SS
T ss_pred ccccccccccccccccccc--ccccccccc--ccccc--------------cccccccccccc---------------cc
Confidence 3445678899999999975 245677778 99999 999999766443 11
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...........+........+... ..+ ........++| .+||+.||++|||+.++++||||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~l~~li-----~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 200 EESNSDDQLEIIEKILKRPLPSSS--QQS-----REKSEELRDLI-----KKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp TTSSHHHHHHHHHHHHHTHHHHHT--TSH-----TTSHHHHHHHH-----HHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccchhhhhhhhhcccccccccc--ccc-----chhHHHHHHHH-----HHHccCChhHCcCHHHHhcCCCC
Confidence 111000000000000000000000 000 00114556666 99999999999999999999998
No 223
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.89 E-value=5.3e-24 Score=205.37 Aligned_cols=159 Identities=26% Similarity=0.402 Sum_probs=111.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.+++|++.||+|||++||+|+||||+||+++.++.+||+|||++....... ...
T Consensus 106 ~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~----------------------~~~ 163 (266)
T cd06651 106 SVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC----------------------MSG 163 (266)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc----------------------ccC
Confidence 3567899999999999999999999999999999999999999999987542100 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. +..++.++ |+||+ ||++||+++|+++.
T Consensus 164 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~i~~el~~g~~pf--------------- 209 (266)
T cd06651 164 TGIRSVTGTPYWMSPEVIS---GEGYGRKA--DVWSL--------------GCTVVEMLTEKPPW--------------- 209 (266)
T ss_pred CccccCCccccccCHHHhC---CCCCCchh--hhHHH--------------HHHHHHHHHCCCCc---------------
Confidence 1223356889999999987 56677788 99999 99999987765421
Q ss_pred CCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 162 TGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 162 ~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
.............. ...+.+|.. .++...+++ +||..||++|||++|+++||||+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li------~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 210 AEYEAMAAIFKIATQPTNPQLPSH-------------ISEHARDFL------GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred cccchHHHHHHHhcCCCCCCCchh-------------cCHHHHHHH------HHhcCChhhCcCHHHHhcCcccc
Confidence 11111111111111 111222222 124455555 46778999999999999999996
No 224
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.89 E-value=4.3e-24 Score=210.80 Aligned_cols=184 Identities=26% Similarity=0.349 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc----CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY----EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~----~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.++.++.|++.||+|||++||+||||||+||+++. ++.+||+|||++.......
T Consensus 109 ~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~---------------------- 166 (316)
T cd07842 109 MVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPL---------------------- 166 (316)
T ss_pred HHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCc----------------------
Confidence 57899999999999999999999999999999999 8899999999998543210
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh------------
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT------------ 146 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~------------ 146 (454)
.........++|..|+|||++.. ...++.++ ||||+ |+++++++++++..
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~~l~~l~~~~~~~~~~~~~~~~~~~ 228 (316)
T cd07842 167 KPLADLDPVVVTIWYRAPELLLG--ARHYTKAI--DIWAI--------------GCIFAELLTLEPIFKGREAKIKKSNP 228 (316)
T ss_pred ccccccCCccccccccCHHHHhC--CCCCCcHH--HHHHH--------------HHHHHHHHhcCCCCcCCcccccccch
Confidence 00112334578999999998761 34577788 99999 88888877655421
Q ss_pred --HHHHHHHhhhcCCCCCCchhhh--hhhhhc----cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCC
Q psy7309 147 --LEELKHNIRRENGPSTGSNVQK--SLQKFQ----KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHD 218 (454)
Q Consensus 147 --~~~l~~~i~~~~~p~~~~~~~~--~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~d 218 (454)
...+...+.....|... .... ....+. ......++.. ....|-. .....+....+++ .+||+.|
T Consensus 229 ~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~i-----~~~l~~~ 300 (316)
T cd07842 229 FQRDQLERIFEVLGTPTEK-DWPDIKKMPEYDTLMKDFKTKTYPSN-SLAKWME-KHKKPDSQGFDLL-----RKLLEYD 300 (316)
T ss_pred hHHHHHHHHHHHhCCCchh-HHHHHhhcccchhhhhhccCCCCCCc-cHHHHHH-hccCCCHHHHHHH-----HHHhcCC
Confidence 11222222222211111 0000 000000 0001111100 0000000 0012335566777 9999999
Q ss_pred CCCCCChhhhhcCccc
Q psy7309 219 PSKRPSSEQNLCQPIS 234 (454)
Q Consensus 219 P~~Rpta~e~l~hp~f 234 (454)
|++|||+.|+++||||
T Consensus 301 P~~Rps~~eil~~~~f 316 (316)
T cd07842 301 PTKRITAEEALEHPYF 316 (316)
T ss_pred cccCcCHHHHhcCCCC
Confidence 9999999999999998
No 225
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.89 E-value=7.5e-24 Score=209.64 Aligned_cols=185 Identities=24% Similarity=0.227 Sum_probs=121.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccC----CCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYIL----PPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 78 (454)
.++.++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.................... .........
T Consensus 104 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (316)
T cd05574 104 VARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSE 183 (316)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcc
Confidence 5678899999999999999999999999999999999999999999875432111000000000000 000000000
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
.........+||..|+|||++. +..++.++ ||||+ |+++|+++.|..
T Consensus 184 ~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~ll~~l~~g~~-------------- 230 (316)
T cd05574 184 EPSFRSNSFVGTEEYIAPEVIS---GDGHGSAV--DWWTL--------------GILLYEMLYGTT-------------- 230 (316)
T ss_pred cccCCCCCCcCccCCcCHHHHc---CCCCCchH--HHHHH--------------HHHHHHHhhCCC--------------
Confidence 1122334568999999999987 56678888 99999 999999766543
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC----hhhhhcCccc
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS----SEQNLCQPIS 234 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt----a~e~l~hp~f 234 (454)
|+........+..+. .....++... ..+....+++ ++||+.||++||| ++|++.||||
T Consensus 231 -pf~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~li-----~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 231 -PFKGSNRDETFSNIL-KKEVTFPGSP-----------PVSSSARDLI-----RKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred -CCCCCchHHHHHHHh-cCCccCCCcc-----------ccCHHHHHHH-----HHHccCCHhHCCCchhhHHHHHcCchh
Confidence 222222222222222 1122222221 1236677888 9999999999999 9999999999
Q ss_pred ccCC
Q psy7309 235 LEGS 238 (454)
Q Consensus 235 ~~~~ 238 (454)
....
T Consensus 293 ~~~~ 296 (316)
T cd05574 293 RGVN 296 (316)
T ss_pred hcCC
Confidence 8644
No 226
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.89 E-value=7.1e-24 Score=206.07 Aligned_cols=175 Identities=27% Similarity=0.314 Sum_probs=116.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++..... ..
T Consensus 99 ~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~-------------------------~~ 153 (283)
T cd07835 99 PLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGV-------------------------PV 153 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCC-------------------------Cc
Confidence 35788999999999999999999999999999999999999999999874321 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......++..|+|||++.. ...++.++ |+||+ |+++|++++|.+. ...++...+..
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~--~~~~~~~~--Di~sl--------------G~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLG--SRQYSTPV--DIWSI--------------GCIFAEMVNRRPLFPGDSEIDQLFRIFRT 215 (283)
T ss_pred cccCccccccCCCCCceeec--CcccCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 12233467889999998862 23467777 99999 9999997776542 22333333333
Q ss_pred cCCCCCCch-h----hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 157 ENGPSTGSN-V----QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 157 ~~~p~~~~~-~----~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
...|..... . ......+........... ....+..+.+++ .+||+.||.+|||++|++.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~li-----~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 216 LGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKV----------VPNLDEDGLDLL-----SKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hCCCChHHhhhhhhchhhhhhcccccccchhhh----------cCCCCHHHHHHH-----HHHhcCChhhCcCHHHHhcC
Confidence 222221110 0 000001110000000000 012235666777 99999999999999999999
Q ss_pred ccc
Q psy7309 232 PIS 234 (454)
Q Consensus 232 p~f 234 (454)
|||
T Consensus 281 ~~~ 283 (283)
T cd07835 281 PYF 283 (283)
T ss_pred CCC
Confidence 998
No 227
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.89 E-value=1e-23 Score=202.70 Aligned_cols=157 Identities=25% Similarity=0.332 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++..... .
T Consensus 93 ~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~--------------------------~ 146 (262)
T cd05572 93 YTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS--------------------------G 146 (262)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc--------------------------c
Confidence 35778999999999999999999999999999999999999999999875431 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+. ...++.++ |+||+ |+++|++++|.. |+
T Consensus 147 ~~~~~~~~~~~~~~PE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~ 192 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIIL---NKGYDFSV--DYWSL--------------GILLYELLTGRP---------------PF 192 (262)
T ss_pred cccccccCCcCccChhHhc---CCCCCChh--hhhhh--------------HHHHHHHHhCCC---------------Cc
Confidence 1223457889999999987 56678888 99999 999999766543 22
Q ss_pred CCch--hhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCcc
Q psy7309 162 TGSN--VQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPI 233 (454)
Q Consensus 162 ~~~~--~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~ 233 (454)
.... .......+.. .....+|... ++...++| .+||+.||.+||| ++|+++|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i-----~~~l~~~p~~R~~~~~~~~~~l~~~~~ 254 (262)
T cd05572 193 GEDDEDPMEIYNDILKGNGKLEFPNYI-------------DKAAKDLI-----KQLLRRNPEERLGNLKGGIKDIKKHKW 254 (262)
T ss_pred CCCCCCHHHHHHHHhccCCCCCCCccc-------------CHHHHHHH-----HHHccCChhhCcCCcccCHHHHhcChh
Confidence 1111 1122222221 1222233221 36677888 9999999999999 999999999
Q ss_pred ccc
Q psy7309 234 SLE 236 (454)
Q Consensus 234 f~~ 236 (454)
|..
T Consensus 255 ~~~ 257 (262)
T cd05572 255 FNG 257 (262)
T ss_pred hhC
Confidence 984
No 228
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.89 E-value=8e-24 Score=208.21 Aligned_cols=190 Identities=24% Similarity=0.290 Sum_probs=119.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|+++||+|||++||+|+||||+||+++.++.+||+|||++........... .. .....
T Consensus 115 ~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------~~--~~~~~ 180 (311)
T cd07866 115 SQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPK------------GG--GGGGT 180 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccc------------cC--Ccccc
Confidence 46889999999999999999999999999999999999999999999985532110000 00 00122
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
...+...||+.|+|||++.. ...++.++ ||||+ |+++|||++|.+.. ...+...+..
T Consensus 181 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 181 RKYTNLVVTRWYRPPELLLG--ERRYTTAV--DIWGI--------------GCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred cccccceeccCcCChHHhhC--CCccCchh--HhHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 33456688999999999762 34577778 99999 99999987766521 1222222222
Q ss_pred cCCCCCCc-hhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGS-NVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~-~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+.... .....+..... ......+.. +.... ....+...+++ .+||+.||.+|||+.|++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~i-----~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRT-----LEERF-GKLGPEGLDLL-----SKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCcc-----HHHHc-ccCChhHHHHH-----HHHcccCcccCcCHHHHhcCCCC
Confidence 22221111 00000000000 000000100 00000 11124555677 99999999999999999999998
No 229
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.89 E-value=1.1e-23 Score=202.68 Aligned_cols=164 Identities=20% Similarity=0.291 Sum_probs=115.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||+.||+|+||||+||+++.++.+||+|||++.......... ...
T Consensus 102 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------------------~~~ 162 (265)
T cd06631 102 PVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG-------------------THS 162 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc-------------------ccc
Confidence 3578899999999999999999999999999999999999999999998653210000 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||..|+|||++. +..++.++ |+||+ |++++++++|..+.
T Consensus 163 ~~~~~~~~~~~~~~pe~~~---~~~~~~~~--Dv~sl--------------G~~~~~l~~g~~p~--------------- 208 (265)
T cd06631 163 NMLKSMHGTPYWMAPEVIN---ESGYGRKS--DIWSI--------------GCTVFEMATGKPPL--------------- 208 (265)
T ss_pred ccccccCCCccccChhhhc---CCCCcchh--hHHHH--------------HHHHHHHHhCCCcc---------------
Confidence 1223457899999999987 56677888 99999 99999987765421
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
............... ....+... ...+....++| ++||+.||.+|||+.|+++||||
T Consensus 209 ~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~i-----~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 209 ASMDRLAAMFYIGAH-RGLMPRLP----------DSFSAAAIDFV-----TSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ccCChHHHHHHhhhc-cCCCCCCC----------CCCCHHHHHHH-----HHHhcCCcccCCCHHHHhcCCCC
Confidence 111111111111101 00111111 11225667788 99999999999999999999997
No 230
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.89 E-value=8.3e-24 Score=212.57 Aligned_cols=178 Identities=29% Similarity=0.367 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~---------------------------- 171 (345)
T cd07877 120 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------------------------- 171 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc----------------------------
Confidence 4678899999999999999999999999999999999999999999987432
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
.......||..|+|||++.. ...++.++ |+||+ ||+++++++|++.. ...+...+..
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dvwsl--------------G~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (345)
T cd07877 172 DEMTGYVATRWYRAPEIMLN--WMHYNQTV--DIWSV--------------GCIMAELLTGRTLFPGTDHIDQLKLILRL 233 (345)
T ss_pred ccccccccCCCccCHHHHhC--ccCCCchh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 12234578899999999761 24577778 99999 99999977765421 1222222221
Q ss_pred cCCCCCCc-------hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 157 ENGPSTGS-------NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 157 ~~~p~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
...+.... ........+.......+.... ...++...++| .+||+.||.+|||+.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~li-----~~~L~~dp~~R~t~~e~l 298 (345)
T cd07877 234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF----------IGANPLAVDLL-----EKMLVLDSDKRITAAQAL 298 (345)
T ss_pred hCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhc----------CCCCHHHHHHH-----HHHcCCChhhcCCHHHHh
Confidence 11111100 000111111111111111110 01235667788 999999999999999999
Q ss_pred cCcccccCCCC
Q psy7309 230 CQPISLEGSSS 240 (454)
Q Consensus 230 ~hp~f~~~~~~ 240 (454)
.||||.+...+
T Consensus 299 ~h~~f~~~~~~ 309 (345)
T cd07877 299 AHAYFAQYHDP 309 (345)
T ss_pred cChhhhhcCCC
Confidence 99999976654
No 231
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.89 E-value=4.3e-24 Score=205.29 Aligned_cols=162 Identities=27% Similarity=0.375 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..+++++.|++.||+|||+ .|++|+||||+||+++.++.+||+|||.+......
T Consensus 100 ~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~------------------------- 154 (265)
T cd06605 100 RILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS------------------------- 154 (265)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH-------------------------
Confidence 3568899999999999999 99999999999999999999999999998765321
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
......|+..|+|||.+. +..++.++ |+||+ |++++++++|..+....-
T Consensus 155 --~~~~~~~~~~y~~PE~~~---~~~~~~~~--Dv~sl--------------G~~l~~l~~g~~p~~~~~---------- 203 (265)
T cd06605 155 --LAKTFVGTSSYMAPERIQ---GNDYSVKS--DIWSL--------------GLSLIELATGRFPYPPEN---------- 203 (265)
T ss_pred --HhhcccCChhccCHHHHc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCCCCccc----------
Confidence 011167889999999987 56788888 99999 999999776553210000
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
............+.....+..+.. ..++...++| .+||..||++|||+.|++.||||+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~li-----~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 204 DPPDGIFELLQYIVNEPPPRLPSG------------KFSPDFQDFV-----NLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred cccccHHHHHHHHhcCCCCCCChh------------hcCHHHHHHH-----HHHcCCCchhCcCHHHHhhCchhhc
Confidence 000111122222222222222222 0225567787 9999999999999999999999974
No 232
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.89 E-value=8.2e-24 Score=202.81 Aligned_cols=162 Identities=27% Similarity=0.396 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+|+||||+||+++.++.+||+|||++..... ..
T Consensus 101 ~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~-------------------------~~ 155 (262)
T cd06613 101 LQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA-------------------------TI 155 (262)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhh-------------------------hh
Confidence 35788999999999999999999999999999999999999999999876532 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+.......++.++ |+||+ |+++++|++|.++ +
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~--Di~sl--------------G~~l~~~~tg~~p---------------~ 204 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKC--DIWAL--------------GITAIELAELQPP---------------M 204 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchh--hhHHH--------------HHHHHHHHhCCCC---------------C
Confidence 123345789999999998722123677788 99999 9999998776542 2
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
................ ...+... .. ...+....+++ ++||..||.+|||+.+++.|+|
T Consensus 205 ~~~~~~~~~~~~~~~~-~~~~~~~--~~------~~~~~~~~~li-----~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 205 FDLHPMRALFLISKSN-FPPPKLK--DK------EKWSPVFHDFI-----KKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred CCCCHHHHHHHHHhcc-CCCcccc--ch------hhhhHHHHHHH-----HHHcCCChhhCCCHHHHhcCCC
Confidence 1111111111111110 0000000 00 01124556777 9999999999999999999998
No 233
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.89 E-value=7e-24 Score=205.48 Aligned_cols=163 Identities=27% Similarity=0.411 Sum_probs=118.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++..... ..
T Consensus 101 ~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~-------------------------~~ 155 (277)
T cd06917 101 KYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ-------------------------NS 155 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC-------------------------Cc
Confidence 46788999999999999999999999999999999999999999999875431 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+.. +..++.++ |+||+ |+++|++++|.+ |+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~~l~~ll~g~~---------------p~ 202 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITE--GKYYDTKA--DIWSL--------------GITIYEMATGNP---------------PY 202 (277)
T ss_pred cccccccCCcceeCHHHhcc--CCccccch--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 22334578999999999862 34567778 99999 999999776554 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
...........+.......++.. .......+++ .+||+.||++|||+.|++.||||.+...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~i-----~~~l~~~p~~R~~~~~il~~~~~~~~~~ 263 (277)
T cd06917 203 SDVDAFRAMMLIPKSKPPRLEDN------------GYSKLLREFV-----AACLDEEPKERLSAEELLKSKWIKAHSK 263 (277)
T ss_pred CCCChhhhhhccccCCCCCCCcc------------cCCHHHHHHH-----HHHcCCCcccCcCHHHHhhChHhhcccc
Confidence 22222111111111111111111 1225566777 9999999999999999999999986553
No 234
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.89 E-value=1.1e-23 Score=206.07 Aligned_cols=155 Identities=26% Similarity=0.304 Sum_probs=117.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+|+||||.|||++.++.+||+|||++.....
T Consensus 101 ~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~--------------------------- 153 (290)
T cd05580 101 PVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG--------------------------- 153 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC---------------------------
Confidence 35778999999999999999999999999999999999999999999875421
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......|++.|+|||.+. +..++.++ |+||+ |++++++++|.. |+
T Consensus 154 -~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~ 198 (290)
T cd05580 154 -RTYTLCGTPEYLAPEIIL---SKGYGKAV--DWWAL--------------GILIYEMLAGYP---------------PF 198 (290)
T ss_pred -CCCCCCCCccccChhhhc---CCCCCccc--cHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 123457899999999987 55677788 99999 999999776553 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
...........+. .....+|... ++...++| .+||..||.+|+ +++|+++||||..
T Consensus 199 ~~~~~~~~~~~~~-~~~~~~~~~~-------------~~~l~~li-----~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 199 FDDNPIQIYEKIL-EGKVRFPSFF-------------SPDAKDLI-----RNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred CCCCHHHHHHHHh-cCCccCCccC-------------CHHHHHHH-----HHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 2222222222222 2223333331 26667888 999999999999 9999999999975
Q ss_pred C
Q psy7309 237 G 237 (454)
Q Consensus 237 ~ 237 (454)
.
T Consensus 260 ~ 260 (290)
T cd05580 260 I 260 (290)
T ss_pred C
Confidence 3
No 235
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.89 E-value=7.1e-24 Score=204.31 Aligned_cols=162 Identities=26% Similarity=0.398 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++..... ..
T Consensus 106 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~-------------------------~~ 160 (267)
T cd06646 106 LQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITA-------------------------TI 160 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecc-------------------------cc
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+.......++.++ |+||+ |+++||+++++++..
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~--Dvws~--------------G~il~el~~g~~p~~-------------- 210 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLC--DIWAV--------------GITAIELAELQPPMF-------------- 210 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchh--hHHHH--------------HHHHHHHHhCCCCcc--------------
Confidence 122345789999999998532245567777 99999 999999877654221
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
..........+. ......+.... ....+..+.+++ ++||..||.+|||++++++|+|
T Consensus 211 -~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~li-----~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 211 -DLHPMRALFLMS-KSNFQPPKLKD--------KTKWSSTFHNFV-----KISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -ccchhhhheeee-cCCCCCCCCcc--------ccccCHHHHHHH-----HHHhhCChhhCcCHHHHhcCCC
Confidence 110000011111 00111111000 011235667788 9999999999999999999987
No 236
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.89 E-value=9.8e-24 Score=200.99 Aligned_cols=156 Identities=29% Similarity=0.397 Sum_probs=116.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+..... ..
T Consensus 103 ~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~-------------------------~~ 157 (258)
T cd08215 103 EQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS-------------------------TV 157 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeeccc-------------------------Cc
Confidence 36788999999999999999999999999999999999999999999875431 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||... ...++.++ |+||+ |+++++++.+.. |+
T Consensus 158 ~~~~~~~~~~~y~~pe~~~---~~~~~~~~--Dv~sl--------------G~~~~~l~~g~~---------------p~ 203 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQ---NKPYNYKS--DIWSL--------------GCVLYELCTLKH---------------PF 203 (258)
T ss_pred ceecceeeeecccChhHhc---cCCCCccc--cHHHH--------------HHHHHHHHcCCC---------------CC
Confidence 1223357899999999987 56677888 99999 999999766543 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...................++.. .+....+++ ++||..||.+|||+.|+|+||||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 204 EGENLLELALKILKGQYPPIPSQ-------------YSSELRNLV-----SSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CCCcHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHhcCCCC
Confidence 22222222223322222223322 125566777 99999999999999999999997
No 237
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.89 E-value=8.6e-24 Score=203.51 Aligned_cols=164 Identities=26% Similarity=0.364 Sum_probs=114.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++ .+||+|||.+........ ..
T Consensus 103 ~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~---------------------~~ 161 (268)
T cd06630 103 AVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT---------------------GA 161 (268)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc---------------------cC
Confidence 45788999999999999999999999999999998776 599999999876532100 11
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
........||..|+|||++. +..++.++ |+||+ |++++++++|..+....
T Consensus 162 ~~~~~~~~~~~~~~~PE~~~---~~~~~~~~--Dv~sl--------------G~~l~~l~~g~~p~~~~----------- 211 (268)
T cd06630 162 GEFQGQLLGTIAFMAPEVLR---GEQYGRSC--DVWSV--------------GCVIIEMATAKPPWNAE----------- 211 (268)
T ss_pred CccccccccccceeCHhHhc---cCCCCccc--chHHH--------------HHHHHHHHhCCCCCCCC-----------
Confidence 11233457899999999987 56778888 99999 99999977665421000
Q ss_pred CCCchhhhhhhhh-ccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 161 STGSNVQKSLQKF-QKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
............ ........+.. .++...+++ .+||..||.+|||+.++++||||.
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 212 -KHSNHLALIFKIASATTAPSIPEH-------------LSPGLRDVT-----LRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred -CCcchHHHHHHHhccCCCCCCchh-------------hCHHHHHHH-----HHHcCCCcccCcCHHHHhcCcccC
Confidence 000001111111 11111222221 236667788 999999999999999999999984
No 238
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.89 E-value=1.8e-23 Score=200.21 Aligned_cols=152 Identities=26% Similarity=0.389 Sum_probs=114.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.+++++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..... ..
T Consensus 100 ~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~-------------------------~~ 154 (255)
T cd08219 100 DTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS-------------------------PG 154 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecc-------------------------cc
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||++. +..++.++ |+||+ |+++|+|++|.. |+
T Consensus 155 ~~~~~~~~~~~~~aPE~~~---~~~~~~~~--Dv~sl--------------G~i~~~l~~g~~---------------p~ 200 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWE---NMPYNNKS--DIWSL--------------GCILYELCTLKH---------------PF 200 (255)
T ss_pred cccccccCCccccCHHHHc---cCCcCchh--hhhhh--------------chhheehhhccC---------------CC
Confidence 1233457899999999987 56678888 99999 999999877543 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
...+.......+........+.. .+....+++ ++||+.||.+|||+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 201 QANSWKNLILKVCQGSYKPLPSH-------------YSYELRSLI-----KQMFKRNPRSRPSATTILS 251 (255)
T ss_pred CCCCHHHHHHHHhcCCCCCCCcc-------------cCHHHHHHH-----HHHHhCCcccCCCHHHHhh
Confidence 33333333333332322222222 124566777 9999999999999998875
No 239
>KOG1027|consensus
Probab=99.89 E-value=1.1e-23 Score=220.04 Aligned_cols=159 Identities=30% Similarity=0.372 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC---C--CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE---D--HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~---~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.+.++.|++.||+|||+.+||||||||.||||+.. + .++|+|||+++.+....
T Consensus 608 ~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~---------------------- 665 (903)
T KOG1027|consen 608 PISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK---------------------- 665 (903)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc----------------------
Confidence 57789999999999999999999999999999873 3 58999999999775321
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC-chhhHHHHHHHhhhc
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD-RPKTLEELKHNIRRE 157 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~-~~~~~~~l~~~i~~~ 157 (454)
+.-....+..||..|+|||++. ...-+..+ ||+|+ ||++|.+++| .-+.-+.+.+.
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~---~~~~~~av--DiFsl--------------GCvfyYvltgG~HpFGd~~~R~---- 722 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLR---EDRKTQAV--DIFSL--------------GCVFYYVLTGGSHPFGDSLERQ---- 722 (903)
T ss_pred chhhcccCCCCcccccCHHHHh---ccccCccc--chhhc--------------CceEEEEecCCccCCCchHHhh----
Confidence 2223366788999999999998 45556677 99999 9999996654 32222222110
Q ss_pred CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
.++. .....+-... +.. ..++.+|| .+||+.||..||||.++|.||+|=.
T Consensus 723 -------------~NIl-~~~~~L~~L~---------~~~-d~eA~dLI-----~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 723 -------------ANIL-TGNYTLVHLE---------PLP-DCEAKDLI-----SRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred -------------hhhh-cCccceeeec---------cCc-hHHHHHHH-----HHhcCCCcccCCCHHHHhCCCccCC
Confidence 0011 1111111110 011 12778898 9999999999999999999999953
No 240
>KOG2345|consensus
Probab=99.89 E-value=2.7e-24 Score=197.04 Aligned_cols=166 Identities=23% Similarity=0.252 Sum_probs=115.6
Q ss_pred hHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 3 RAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
++.+|+.+|++||++||+.. ++||||||.|||+...+.++|.|||.++...-... .++....
T Consensus 128 ~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~----------------~~~~a~~ 191 (302)
T KOG2345|consen 128 QILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIE----------------GSRQALR 191 (302)
T ss_pred HHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEee----------------chHHHHH
Confidence 67899999999999999998 99999999999999999999999999885421100 0000011
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeee-ecCCchhhHHHHHHHhhhcCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAE-VYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~e-l~~~~~~~~~~l~~~i~~~~~ 159 (454)
-........|..|+|||.+.-..+...+.++ ||||| ||++|+ |+...|..... ..++
T Consensus 192 lQe~a~e~Ct~pyRAPELf~vk~~~ti~ert--DIWSL--------------GCtLYa~mf~~sPfe~~~------~~Gg 249 (302)
T KOG2345|consen 192 LQEWAEERCTIPYRAPELFNVKSHCTITERT--DIWSL--------------GCTLYAMMFGESPFERIY------QQGG 249 (302)
T ss_pred HHHHHHHhCCCcccCchheecccCccccccc--chhhh--------------hHHHHHHHHcCCcchHHh------hcCC
Confidence 1223345679999999999765667778888 99999 888888 55544422111 0111
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
. +.--..+....+|... ..++...++| ++||+.||.+||++.+++.+
T Consensus 250 S---------laLAv~n~q~s~P~~~-----------~yse~l~~li-----k~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 250 S---------LALAVQNAQISIPNSS-----------RYSEALHQLI-----KSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred e---------EEEeeeccccccCCCC-----------CccHHHHHHH-----HHHhcCCcccCCCHHHHHHH
Confidence 0 0001113344445442 2347777888 99999999999999988764
No 241
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.89 E-value=1.1e-23 Score=204.64 Aligned_cols=170 Identities=28% Similarity=0.377 Sum_probs=121.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||.+..... .
T Consensus 95 ~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--------------------------~ 148 (277)
T cd05577 95 ARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--------------------------G 148 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--------------------------C
Confidence 35778899999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||++. +..++.++ |+||+ |+++|++++|+.+ +
T Consensus 149 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~p---------------~ 194 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQ---GEVYDFSV--DWFAL--------------GCTLYEMIAGRSP---------------F 194 (277)
T ss_pred CccccccCCCCcCCHHHhc---CCCCCchh--hhHHH--------------HHHHHHHhhCCCC---------------C
Confidence 1223456788999999987 45578888 99999 9999997766542 1
Q ss_pred CCch----hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCc
Q psy7309 162 TGSN----VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQP 232 (454)
Q Consensus 162 ~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp 232 (454)
.... ......... .....++.. .++...++| ++||+.||.+|| ++.+++.||
T Consensus 195 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~R~~~~~~~~~~ll~h~ 255 (277)
T cd05577 195 RQRKEKVEKEELKRRTL-EMAVEYPDK-------------FSPEAKDLC-----EALLQKDPEKRLGCRGGSADEVREHP 255 (277)
T ss_pred CCCcccccHHHHHhccc-cccccCCcc-------------CCHHHHHHH-----HHHccCChhHccCCCcccHHHHHhCh
Confidence 1110 001111111 111122221 236677888 999999999999 888899999
Q ss_pred ccccCCCCCCCccCccccccCCCCCC
Q psy7309 233 ISLEGSSSGLSVLGSEQLLTCDHIPP 258 (454)
Q Consensus 233 ~f~~~~~~~~~~~~~~~ll~~~~~~~ 258 (454)
||.. ++|+.+-+....|+
T Consensus 256 ~~~~--------~~~~~~~~~~~~~~ 273 (277)
T cd05577 256 LFKD--------LNWRRLEAGMLEPP 273 (277)
T ss_pred hhhc--------CChhhhhcCCCCCC
Confidence 9974 44555554444443
No 242
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.89 E-value=5.6e-24 Score=206.44 Aligned_cols=159 Identities=28% Similarity=0.426 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++..... ..
T Consensus 101 ~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~-------------------------~~ 155 (277)
T cd06642 101 TYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD-------------------------TQ 155 (277)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccC-------------------------cc
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||++. +..++.++ |+||+ |++++|+++|+++..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~el~tg~~p~~-------------- 202 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIK---QSAYDFKA--DIWSL--------------GITAIELAKGEPPNS-------------- 202 (277)
T ss_pred hhhhcccCcccccCHHHhC---cCCCchhh--hHHHH--------------HHHHHHHHhCCCCCc--------------
Confidence 1223356889999999987 56677788 99999 999999877665321
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
..........+.......++. ..+....+++ .+||+.+|.+|||+.++++||||...
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~li-----~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 203 -DLHPMRVLFLIPKNSPPTLEG-------------QYSKPFKEFV-----EACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred -ccchhhHHhhhhcCCCCCCCc-------------ccCHHHHHHH-----HHHccCCcccCcCHHHHHHhHHHHHH
Confidence 111111111111111111111 1224566777 99999999999999999999999753
No 243
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.89 E-value=1.4e-23 Score=200.84 Aligned_cols=156 Identities=28% Similarity=0.390 Sum_probs=115.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++..... ..
T Consensus 101 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~-------------------------~~ 155 (256)
T cd08221 101 EMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS-------------------------EY 155 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccc-------------------------cc
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||++. +..++.++ |+||+ |++++|++++.. |+
T Consensus 156 ~~~~~~~~~~~y~ape~~~---~~~~~~~~--Dv~sl--------------G~i~~~l~~g~~---------------~~ 201 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQ---GVKYNFKS--DIWAL--------------GCVLYELLTLKR---------------TF 201 (256)
T ss_pred ccccccCCCccccCHhhcC---CCCCCCcc--hhHHH--------------HHHHHHHHHCCC---------------CC
Confidence 1233457899999999987 55677778 99999 999999766543 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...........+........+.. .+....+++ .+||..||.+|||+.++++|||+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 202 DATNPLNLVVKIVQGNYTPVVSV-------------YSSELISLV-----HSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred CCCCHHHHHHHHHcCCCCCCccc-------------cCHHHHHHH-----HHHcccCcccCCCHHHHhhCcCC
Confidence 22222222222222211111111 125567777 99999999999999999999985
No 244
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.89 E-value=7.9e-24 Score=204.39 Aligned_cols=153 Identities=20% Similarity=0.241 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..... ....
T Consensus 113 ~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~~ 169 (272)
T cd05075 113 MLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNG-----------------------DYYR 169 (272)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcc-----------------------ccee
Confidence 47889999999999999999999999999999999999999999999854321 0001
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+++.|+|||... ...++.++ ||||+ |+++||+++ +.+ |+
T Consensus 170 ~~~~~~~~~~~~~pe~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p~ 215 (272)
T cd05075 170 QGRIAKMPVKWIAIESLA---DRVYTTKS--DVWSF--------------GVTMWEIATRGQT---------------PY 215 (272)
T ss_pred cCCcccCCcccCCHHHcc---CCCcChHH--HHHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 112234577899999987 56788888 99999 999999765 332 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
...........+........+.. ......+++ .+||+.||.+|||+.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 216 PGVENSEIYDYLRQGNRLKQPPD-------------CLDGLYSLM-----SSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCcCHHHHHH
Confidence 22222223333332222222222 124566777 9999999999999998875
No 245
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.89 E-value=1.2e-23 Score=205.02 Aligned_cols=162 Identities=25% Similarity=0.390 Sum_probs=116.5
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..++.++.|++.||.|||+ +||+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------------- 155 (286)
T cd06622 102 DVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA-------------------------- 155 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC--------------------------
Confidence 3678999999999999997 5999999999999999999999999999875421
Q ss_pred CCCCcCcccccceecccccccc---ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309 81 DTSHTGQVGTALYAAPELDSHG---VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE 157 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~---~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~ 157 (454)
.......|++.|+|||++... ....++.++ |+||+ ||++|++++|..+
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~--Diwsl--------------G~il~~l~~g~~p------------ 206 (286)
T cd06622 156 -SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQS--DVWSL--------------GLSILEMALGRYP------------ 206 (286)
T ss_pred -CccccCCCccCccCcchhcCCCCCccCCCCccc--chHhH--------------HHHHHHHHhCCCC------------
Confidence 112334688899999998521 123456677 99999 9999997765532
Q ss_pred CCCCCCchhh---hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 158 NGPSTGSNVQ---KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 158 ~~p~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
+...... ..+..+.......++.. .++...++| .+||+.||++||++++++.||||
T Consensus 207 ---f~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~l~~~~~~ 265 (286)
T cd06622 207 ---YPPETYANIFAQLSAIVDGDPPTLPSG-------------YSDDAQDFV-----AKCLNKIPNRRPTYAQLLEHPWL 265 (286)
T ss_pred ---CCCcchhhHHHHHHHHhhcCCCCCCcc-------------cCHHHHHHH-----HHHcccCcccCCCHHHHhcChhh
Confidence 1111111 11112222222223322 226667888 99999999999999999999999
Q ss_pred ccCCC
Q psy7309 235 LEGSS 239 (454)
Q Consensus 235 ~~~~~ 239 (454)
.....
T Consensus 266 ~~~~~ 270 (286)
T cd06622 266 VKYKN 270 (286)
T ss_pred hhccC
Confidence 86543
No 246
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.89 E-value=3.7e-23 Score=205.20 Aligned_cols=192 Identities=23% Similarity=0.312 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 125 ~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~---------------------------- 176 (317)
T cd06635 125 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS---------------------------- 176 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC----------------------------
Confidence 3577899999999999999999999999999999999999999999876331
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......|++.|+|||.+.......++.++ |+||+ |++++|+++|.++ +
T Consensus 177 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~--Dv~sl--------------Gvil~el~~g~~p---------------~ 224 (317)
T cd06635 177 -PANSFVGTPYWMAPEVILAMDEGQYDGKV--DVWSL--------------GITCIELAERKPP---------------L 224 (317)
T ss_pred -CcccccCCccccChhhhhcCCCCCCCccc--cHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 11234688899999997522245677788 99999 9999998776542 2
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSG 241 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~ 241 (454)
...........+........+.. ..++...+++ .+||+.+|.+|||+.++++|+|+.......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~li-----~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 287 (317)
T cd06635 225 FNMNAMSALYHIAQNESPTLQSN------------EWSDYFRNFV-----DSCLQKIPQDRPTSEELLKHMFVLRERPET 287 (317)
T ss_pred CCccHHHHHHHHHhccCCCCCCc------------cccHHHHHHH-----HHHccCCcccCcCHHHHHhChhhhccCccc
Confidence 22111122222221222111111 1125567777 999999999999999999999997644321
Q ss_pred CCccCccccccCCCCCCCCcchHHHHHHHHHHhcCCCChhHHHHHHHHh
Q psy7309 242 LSVLGSEQLLTCDHIPPPLVGETVLQDMVRQTLSNPQSKGYKYLVAACF 290 (454)
Q Consensus 242 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~f 290 (454)
... ......++.+.+.+...|+.+.+-+|
T Consensus 288 -------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (317)
T cd06635 288 -------------------VLI-DLIQRTKDAVRELDNLQYRKMKKLLF 316 (317)
T ss_pred -------------------chh-hHHHHHHHHHHHHhhhHHHHHHHHhc
Confidence 011 11122333555667778888777766
No 247
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.89 E-value=1e-23 Score=208.96 Aligned_cols=154 Identities=19% Similarity=0.247 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ...
T Consensus 110 ~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----------------------~~~ 166 (316)
T cd05108 110 YLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE-----------------------KEY 166 (316)
T ss_pred HHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC-----------------------cce
Confidence 568899999999999999999999999999999999999999999998653210 001
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. +..++.++ ||||+ |+++||+++ +.. |+
T Consensus 167 ~~~~~~~~~~y~apE~~~---~~~~~~~~--Di~sl--------------Gv~l~el~t~g~~---------------p~ 212 (316)
T cd05108 167 HAEGGKVPIKWMALESIL---HRIYTHQS--DVWSY--------------GVTVWELMTFGSK---------------PY 212 (316)
T ss_pred eccCCccceeecChHHhc---cCCCCchh--hhHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 112234467899999987 67788888 99999 999999654 332 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.+.........+........+.. ......+++ .+||+.||.+|||+.+++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 213 DGIPASEISSILEKGERLPQPPI-------------CTIDVYMIM-----VKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CCCCHHHHHHHHhCCCCCCCCCC-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence 22222222222222222222221 124556677 99999999999999999986
No 248
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.89 E-value=9.3e-24 Score=211.65 Aligned_cols=155 Identities=21% Similarity=0.317 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+... ...
T Consensus 173 ~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~-----------------------~~~ 229 (337)
T cd05054 173 EDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD-----------------------PDY 229 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccC-----------------------cch
Confidence 457889999999999999999999999999999999999999999999865321 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ ||+++|+++ |.. |
T Consensus 230 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~Sl--------------Gv~l~el~t~g~~---------------p 275 (337)
T cd05054 230 VRKGDARLPLKWMAPESIF---DKVYTTQS--DVWSF--------------GVLLWEIFSLGAS---------------P 275 (337)
T ss_pred hhccCCCCCccccCcHHhc---CCCCCccc--cHHHH--------------HHHHHHHHHcCCC---------------C
Confidence 1223345677899999988 67788888 99999 999999764 443 2
Q ss_pred CCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 161 STGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+.+.... .....+........+.. ..+...+++ .+||+.+|++|||+.|+++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~-----~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 276 YPGVQIDEEFCRRLKEGTRMRAPEY-------------ATPEIYSIM-----LDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCCCCccHHHHHHHhccCCCCCCcc-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence 2111110 11111111111111211 125566777 99999999999999988864
No 249
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.89 E-value=1.2e-23 Score=206.48 Aligned_cols=163 Identities=23% Similarity=0.385 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++..... ..
T Consensus 116 ~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~-------------------------~~ 170 (292)
T cd06657 116 EQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------------EV 170 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccc-------------------------cc
Confidence 35788999999999999999999999999999999999999999998864421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......||+.|+|||.+. ...++.++ |+||+ |++++++++|.++ +
T Consensus 171 ~~~~~~~~~~~y~~pE~~~---~~~~~~~~--Dv~sl--------------Gvil~el~tg~~p---------------~ 216 (292)
T cd06657 171 PRRKSLVGTPYWMAPELIS---RLPYGPEV--DIWSL--------------GIMVIEMVDGEPP---------------Y 216 (292)
T ss_pred ccccccccCccccCHHHhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1223457899999999987 55677788 99999 9999997765431 2
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
...........+....+..++.. ...++...+++ .+||+.||.+|||+.+++.||||.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 217 FNEPPLKAMKMIRDNLPPKLKNL-----------HKVSPSLKGFL-----DRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred CCCCHHHHHHHHHhhCCcccCCc-----------ccCCHHHHHHH-----HHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 11111111111111111111111 11225566777 9999999999999999999999997664
No 250
>PHA02988 hypothetical protein; Provisional
Probab=99.89 E-value=1.5e-23 Score=204.89 Aligned_cols=151 Identities=15% Similarity=0.175 Sum_probs=112.5
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
...++++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++.....
T Consensus 122 ~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~-------------------------- 175 (283)
T PHA02988 122 KTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS-------------------------- 175 (283)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcc--------------------------
Confidence 3568899999999999998 4999999999999999999999999999875421
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.....+||..|+|||++.. ....|+.++ ||||+ ||++||+++|.. |
T Consensus 176 --~~~~~~~~~~y~aPE~~~~-~~~~~~~k~--Di~Sl--------------Gvil~el~~g~~---------------P 221 (283)
T PHA02988 176 --PPFKNVNFMVYFSYKMLND-IFSEYTIKD--DIYSL--------------GVVLWEIFTGKI---------------P 221 (283)
T ss_pred --ccccccCcccccCHHHhhh-ccccccchh--hhhHH--------------HHHHHHHHHCCC---------------C
Confidence 1123578999999999862 125788888 99999 999999776543 3
Q ss_pred CCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...+.......+. ......+|.. .++...+++ .+||+.||++|||++|++.
T Consensus 222 f~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 222 FENLTTKEIYDLIINKNNSLKLPLD-------------CPLEIKCIV-----EACTSHDSIKRPNIKEILY 274 (283)
T ss_pred CCCCCHHHHHHHHHhcCCCCCCCCc-------------CcHHHHHHH-----HHHhcCCcccCcCHHHHHH
Confidence 33333333333332 1222233322 125677888 9999999999999998875
No 251
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.89 E-value=1.2e-23 Score=211.14 Aligned_cols=185 Identities=24% Similarity=0.320 Sum_probs=115.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
+.++.++.||++||+|||++||+||||||+||+++. ++.+||+|||++....... ..
T Consensus 114 ~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~----------------------~~ 171 (342)
T cd07854 114 EHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHY----------------------SH 171 (342)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcc----------------------cc
Confidence 467899999999999999999999999999999985 4578999999987542100 01
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhh
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIR 155 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~ 155 (454)
........||..|+|||++.. ...++.++ ||||+ ||++|++++++... .......+.
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--DiwSl--------------Gvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 172 KGYLSEGLVTKWYRSPRLLLS--PNNYTKAI--DMWAA--------------GCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred ccccccccccccccCHHHHhC--ccccCchh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 112233468999999998752 34577778 99999 99999977765421 122211111
Q ss_pred hcCCCCCCc-hhhhhhhhhccCC--CCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 156 RENGPSTGS-NVQKSLQKFQKSP--PSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 156 ~~~~p~~~~-~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
. .|.... ........+.... ....+.. .+.... ...+.+..+|+ .+||+.||.+|||++|++.||
T Consensus 234 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~li-----~~~L~~dP~~R~t~~ell~h~ 301 (342)
T cd07854 234 S--VPVVREEDRNELLNVIPSFVRNDGGEPRR----PLRDLL-PGVNPEALDFL-----EQILTFNPMDRLTAEEALMHP 301 (342)
T ss_pred h--cCCCChHHhhhhhhhhhhhhhhcccccCC----CHHHHc-cCCCHHHHHHH-----HHHhCCCchhccCHHHHhCCC
Confidence 1 111110 0000000000000 0000000 000000 11235566777 999999999999999999999
Q ss_pred ccccCC
Q psy7309 233 ISLEGS 238 (454)
Q Consensus 233 ~f~~~~ 238 (454)
||....
T Consensus 302 ~~~~~~ 307 (342)
T cd07854 302 YMSCYS 307 (342)
T ss_pred cccccc
Confidence 998543
No 252
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.89 E-value=8.3e-24 Score=215.04 Aligned_cols=154 Identities=23% Similarity=0.352 Sum_probs=108.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+++++++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~-----------------------~~~ 268 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMND-----------------------SNY 268 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCC-----------------------cce
Confidence 467899999999999999999999999999999999999999999998754210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|||||++. ...|+.++ ||||+ ||++|||++ |.. |
T Consensus 269 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--DvwSl--------------Gvil~ellt~G~~---------------P 314 (374)
T cd05106 269 VVKGNARLPVKWMAPESIF---DCVYTVQS--DVWSY--------------GILLWEIFSLGKS---------------P 314 (374)
T ss_pred eeccCCCCccceeCHHHhc---CCCCCccc--cHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1112234567899999987 56788888 99999 999999764 443 2
Q ss_pred CCCchhhhh-hhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKS-LQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+........ ............|.. .+++..+++ .+||+.||++|||+.++++
T Consensus 315 f~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 315 YPGILVNSKFYKMVKRGYQMSRPDF-------------APPEIYSIM-----KMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred CccccccHHHHHHHHcccCccCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 211111111 111111111122221 236677888 9999999999999998865
No 253
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.89 E-value=1e-23 Score=204.18 Aligned_cols=151 Identities=19% Similarity=0.288 Sum_probs=113.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
++++.++.|++.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus 109 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-------------------------- 162 (267)
T PHA03390 109 AEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT-------------------------- 162 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC--------------------------
Confidence 46889999999999999999999999999999999998 999999998874321
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.....||..|+|||++. +..++.++ |+||+ |+++|++++|..+
T Consensus 163 ---~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~~l~~g~~p--------------- 205 (267)
T PHA03390 163 ---PSCYDGTLDYFSPEKIK---GHNYDVSF--DWWAV--------------GVLTYELLTGKHP--------------- 205 (267)
T ss_pred ---CccCCCCCcccChhhhc---CCCCCchh--hHHHH--------------HHHHHHHHHCCCC---------------
Confidence 11246789999999997 56788888 99999 9999997766532
Q ss_pred CCCch-----hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-hhhhhcCccc
Q psy7309 161 STGSN-----VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-SEQNLCQPIS 234 (454)
Q Consensus 161 ~~~~~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-a~e~l~hp~f 234 (454)
+.... ........ ......+. ..++.+.++| .+||+.||.+||+ ++|+|+||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~li-----~~~l~~~p~~R~~~~~~~l~h~~~ 265 (267)
T PHA03390 206 FKEDEDEELDLESLLKRQ--QKKLPFIK-------------NVSKNANDFV-----QSMLKYNINYRLTNYNEIIKHPFL 265 (267)
T ss_pred CCCCCcchhhHHHHHHhh--cccCCccc-------------ccCHHHHHHH-----HHHhccChhhCCchHHHHhcCCcc
Confidence 11110 01111111 11111111 1236777888 9999999999997 5999999999
Q ss_pred c
Q psy7309 235 L 235 (454)
Q Consensus 235 ~ 235 (454)
.
T Consensus 266 ~ 266 (267)
T PHA03390 266 K 266 (267)
T ss_pred c
Confidence 6
No 254
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.89 E-value=1.8e-23 Score=204.41 Aligned_cols=155 Identities=23% Similarity=0.308 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 132 ~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-----------------------~~~ 188 (293)
T cd05053 132 KDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHI-----------------------DYY 188 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccc-----------------------cce
Confidence 356789999999999999999999999999999999999999999999854321 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ ||++||+++ |.. |
T Consensus 189 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p 234 (293)
T cd05053 189 RKTTNGRLPVKWMAPEALF---DRVYTHQS--DVWSF--------------GVLLWEIFTLGGS---------------P 234 (293)
T ss_pred eccCCCCCCccccCHHHhc---cCCcCccc--ceeeh--------------hhHHHHHhcCCCC---------------C
Confidence 1112234567899999987 66788888 99999 999999654 322 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+...........+........+.. ......+++ .+||..||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 235 YPGIPVEELFKLLKEGYRMEKPQN-------------CTQELYHLM-----RDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcccCcccCcCHHHHHHH
Confidence 333333333333322222222221 125566777 99999999999999988863
No 255
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.89 E-value=1.4e-23 Score=204.03 Aligned_cols=180 Identities=21% Similarity=0.324 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++..... ..
T Consensus 100 ~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~-------------------------~~ 154 (284)
T cd07836 100 NTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI-------------------------PV 154 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC-------------------------Cc
Confidence 46788999999999999999999999999999999999999999999975421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......+|..|++||++.. ...++.++ |+||+ |+++|++++|.+. ..+.+...+..
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~--~~~~~~~~--Dv~sl--------------G~~l~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLG--SRTYSTSI--DIWSV--------------GCIMAEMITGRPLFPGTNNEDQLLKIFRI 216 (284)
T ss_pred cccccccccccccChHHhcC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 12234567899999999862 24567777 99999 9999997776542 11222222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...|... ...... ... .-...++.... ..+..+. ...++...+++ .+||+.||.+|||+.|+++||||
T Consensus 217 ~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i-----~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 217 MGTPTES-TWPGIS-QLP-EYKPTFPRYPP-QDLQQLF-PHADPLGIDLL-----HRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hCCCChh-hHHHHh-cCc-hhcccccCCCh-HHHHHHh-hhcCcHHHHHH-----HHHhcCCcccCCCHHHHhcCCCC
Confidence 2222111 111100 000 00001111000 0011111 11236667787 99999999999999999999998
No 256
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.89 E-value=7e-24 Score=208.22 Aligned_cols=160 Identities=18% Similarity=0.230 Sum_probs=109.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+.+...... ......
T Consensus 127 ~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~------------------~~~~~~ 188 (294)
T PHA02882 127 LIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKH------------------IEYSKE 188 (294)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcc------------------cccccc
Confidence 46789999999999999999999999999999999999999999999865321000 000112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHH-----HHHHHhhhc
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLE-----ELKHNIRRE 157 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~-----~l~~~i~~~ 157 (454)
......||+.|+|||++. +..|+.++ ||||+ ||+++||++|.++... .+....
T Consensus 189 ~~~~~~gt~~y~ape~~~---~~~~~~~~--DiwSl--------------G~~l~el~~g~~P~~~~~~~~~~~~~~--- 246 (294)
T PHA02882 189 QKDLHRGTLYYAGLDAHN---GACVTRRG--DLESL--------------GYCMLKWAGIKLPWKGFGHNGNLIHAA--- 246 (294)
T ss_pred cccccCCCccccCHHHhC---CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCccccchHHHHHh---
Confidence 233457999999999988 67788888 99999 9999997765542110 000000
Q ss_pred CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
......++.. ....++. ......+++ ..|+..+|.+||+++++++
T Consensus 247 --------~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~-----~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 247 --------KCDFIKRLHE-GKIKIKN--------------ANKFIYDFI-----ECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred --------HHHHHHHhhh-hhhccCC--------------CCHHHHHHH-----HHHHhCCCCCCCCHHHHHH
Confidence 0011111211 1111111 114556677 9999999999999998764
No 257
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.89 E-value=1.6e-23 Score=201.15 Aligned_cols=157 Identities=29% Similarity=0.399 Sum_probs=115.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--------------------------- 149 (260)
T cd05611 97 DWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE--------------------------- 149 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc---------------------------
Confidence 46889999999999999999999999999999999999999999998864310
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.....|+..|+|||.+. +..++.++ |+||+ |++++++++|.+ |+
T Consensus 150 --~~~~~~~~~y~~pe~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~---------------p~ 193 (260)
T cd05611 150 --NKKFVGTPDYLAPETIL---GVGDDKMS--DWWSL--------------GCVIFEFLFGYP---------------PF 193 (260)
T ss_pred --cccCCCCcCccChhhhc---CCCCcchh--hhHHH--------------HHHHHHHHHCCC---------------CC
Confidence 22346888999999987 44577788 99999 999999776553 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh---hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS---EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta---~e~l~hp~f~~ 236 (454)
...........+... ...++.... ...++...+++ .+||+.||++|||+ +|++.||||..
T Consensus 194 ~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~i-----~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 194 HAETPDAVFDNILSR-RINWPEEVK---------EFCSPEAVDLI-----NRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred CCCCHHHHHHHHHhc-ccCCCCccc---------ccCCHHHHHHH-----HHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 222222222222211 111111110 11236677888 99999999999966 79999999975
No 258
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.89 E-value=1.6e-23 Score=201.79 Aligned_cols=152 Identities=22% Similarity=0.270 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++...... ...
T Consensus 105 ~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~------------------------~~~ 160 (263)
T cd05052 105 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------------------------TYT 160 (263)
T ss_pred HHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccc------------------------eee
Confidence 46788999999999999999999999999999999999999999998754310 001
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||.+. +..++.++ ||||+ ||++|||++ |.. |+
T Consensus 161 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~el~t~g~~---------------p~ 206 (263)
T cd05052 161 AHAGAKFPIKWTAPESLA---YNKFSIKS--DVWAF--------------GVLLWEIATYGMS---------------PY 206 (263)
T ss_pred ccCCCCCccccCCHHHhc---cCCCCchh--HHHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 111233466899999987 56778888 99999 999999875 432 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+.........+........+.. .++...+++ .+||+.||++|||+.|+++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 207 PGIDLSQVYELLEKGYRMERPEG-------------CPPKVYELM-----RACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCCCHHHHHHHHHCCCCCCCCCC-------------CCHHHHHHH-----HHHccCCcccCCCHHHHHH
Confidence 33333333333332222222322 226677888 9999999999999998865
No 259
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.89 E-value=1.5e-23 Score=203.17 Aligned_cols=180 Identities=25% Similarity=0.345 Sum_probs=117.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.|++.||+|||++||+|+||||+||+++.++.+||+|||++..... ..
T Consensus 98 ~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~-------------------------~~ 152 (282)
T cd07829 98 NLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGI-------------------------PL 152 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCC-------------------------Cc
Confidence 46789999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......++..|+|||.+.. ...++.++ |+||+ |++++|++++++. ....+......
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~--~~~~~~~~--Dv~sl--------------G~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 214 (282)
T cd07829 153 RTYTHEVVTLWYRAPEILLG--SKHYSTAV--DIWSV--------------GCIFAEMITGKPLFPGDSEIDQLFKIFQI 214 (282)
T ss_pred cccCccccCcCcCChHHhcC--CcCCCccc--cHHHH--------------HHHHHHHHhCCCCCCCccHHHHHHHHHHH
Confidence 12334566788999999872 23677788 99999 9999997776542 12222222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...|... .+... ..+. .....++.... ..+....+.. +..+.+++ ++||..||++||++++++.||||
T Consensus 215 ~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~i-----~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 215 LGTPTEE-SWPGV-TKLP-DYKPTFPKFPP-KDLEKVLPRL-DPEGIDLL-----SKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred hCCCcHH-HHHhh-cccc-cccccccccCc-cchHHhcccc-cHHHHHHH-----HHhhccCcccCCCHHHHhhCcCC
Confidence 2222111 11100 0000 00111111110 0010111111 35566777 99999999999999999999998
No 260
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.89 E-value=2.5e-23 Score=201.50 Aligned_cols=153 Identities=20% Similarity=0.292 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++..... ....
T Consensus 120 ~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~-----------------------~~~~ 176 (277)
T cd05032 120 KFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYET-----------------------DYYR 176 (277)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccC-----------------------cccc
Confidence 57889999999999999999999999999999999999999999999865321 0111
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+|..|+|||.+. ...++.++ ||||+ ||++||+++ +.+ |+
T Consensus 177 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~t~g~~---------------p~ 222 (277)
T cd05032 177 KGGKGLLPVRWMAPESLK---DGVFTTKS--DVWSF--------------GVVLWEMATLAEQ---------------PY 222 (277)
T ss_pred cCCCCCccccccCHHHHh---cCCCCccc--chHHH--------------HHHHHHhhccCCC---------------CC
Confidence 223346788999999987 56678888 99999 999999765 432 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+.........+........|... +....+++ .+||+.+|++|||+.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~li-----~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 223 QGLSNEEVLKFVIDGGHLDLPENC-------------PDKLLELM-----RMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred ccCCHHHHHHHHhcCCCCCCCCCC-------------CHHHHHHH-----HHHcCCChhhCCCHHHHHH
Confidence 222222333333323333333321 25666788 9999999999999998875
No 261
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.89 E-value=2e-23 Score=206.21 Aligned_cols=173 Identities=21% Similarity=0.341 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++.++.|++.||.|||+ +|++||||||+|||++.++.+||+|||++.....
T Consensus 100 ~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--------------------------- 152 (308)
T cd06615 100 ILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--------------------------- 152 (308)
T ss_pred HHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc---------------------------
Confidence 577899999999999997 6999999999999999999999999999864321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh----HHHHHHHhhhc
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT----LEELKHNIRRE 157 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~----~~~l~~~i~~~ 157 (454)
......+|++.|+|||++. +..++.++ |+||+ |++++++++|+.+. ...+...+...
T Consensus 153 ~~~~~~~~~~~~~aPE~~~---~~~~~~~~--Diwsl--------------G~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 213 (308)
T cd06615 153 SMANSFVGTRSYMSPERLQ---GTHYTVQS--DIWSL--------------GLSLVEMAIGRYPIPPPDAKELEAMFGRP 213 (308)
T ss_pred cccccCCCCcCccChhHhc---CCCCCccc--hHHHH--------------HHHHHHHHhCCCCCCCcchhhHHHhhcCc
Confidence 1123457899999999986 56678788 99999 99999977765421 11111111100
Q ss_pred CCCCCCc-----------------hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCC
Q psy7309 158 NGPSTGS-----------------NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPS 220 (454)
Q Consensus 158 ~~p~~~~-----------------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~ 220 (454)
....... ..............+..|.. ..+....+++ .+||..||+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~li-----~~~l~~~P~ 276 (308)
T cd06615 214 VSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSG------------AFSDEFQDFV-----DKCLKKNPK 276 (308)
T ss_pred cccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCc------------ccCHHHHHHH-----HHHccCChh
Confidence 0000000 00011111111111111111 1235567777 999999999
Q ss_pred CCCChhhhhcCcccccCC
Q psy7309 221 KRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 221 ~Rpta~e~l~hp~f~~~~ 238 (454)
+|||++|+++||||....
T Consensus 277 ~Rpt~~~ll~~~~~~~~~ 294 (308)
T cd06615 277 ERADLKELTKHPFIKRAE 294 (308)
T ss_pred hCcCHHHHhcChhhhhcc
Confidence 999999999999998643
No 262
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.89 E-value=1.8e-23 Score=205.28 Aligned_cols=151 Identities=21% Similarity=0.234 Sum_probs=109.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 120 ~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~--------------------------~~ 173 (297)
T cd05089 120 QLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEV--------------------------YV 173 (297)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccc--------------------------ee
Confidence 5788999999999999999999999999999999999999999999863211 00
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. ...++.++ ||||+ ||++|||++ |.. |+
T Consensus 174 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--DvwSl--------------G~il~el~t~g~~---------------pf 219 (297)
T cd05089 174 KKTMGRLPVRWMAIESLN---YSVYTTKS--DVWSF--------------GVLLWEIVSLGGT---------------PY 219 (297)
T ss_pred ccCCCCcCccccCchhhc---cCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 111123355799999987 56788888 99999 999999764 432 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
...........+........+.. .+....+++ .+||+.||.+|||++++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 220 CGMTCAELYEKLPQGYRMEKPRN-------------CDDEVYELM-----RQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence 33333333333332222222222 225566777 99999999999999988653
No 263
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.89 E-value=9e-24 Score=204.85 Aligned_cols=181 Identities=29% Similarity=0.356 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||.+..... ..
T Consensus 98 ~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~-------------------------~~ 152 (283)
T cd05118 98 SLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGS-------------------------PV 152 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCC-------------------------Cc
Confidence 46788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......++..|+|||.+.. ...++.++ |+||+ |+++|++++|++. ..+.+......
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~--~~~~~~~~--Di~sl--------------G~~l~~l~tg~~~~~~~~~~~~~~~~~~~ 214 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLG--DKGYSTPV--DIWSV--------------GCIFAELLSRRPLFPGKSEIDQLFKIFRT 214 (283)
T ss_pred ccccCccCcccccCcHHHhc--CCCCCchh--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 12334568889999999872 23677888 99999 9999997776541 22222222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.+.|... .+..... ........++.... ...+... ...+....++| .+||+.||.+||++++++.||||
T Consensus 215 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i-----~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 215 LGTPDPE-VWPKFTS-LARNYKFSFPKKAG-MPLPKLF-PNASPQALDLL-----SQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cCCCchH-hcccchh-hhhhhhhhhccccc-cCHHHhh-hhhCHHHHHHH-----HHHhccCcccCcCHHHHhhCCCC
Confidence 2222111 1110000 00011111111100 0001111 11236677777 99999999999999999999997
No 264
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.89 E-value=1.7e-23 Score=204.55 Aligned_cols=159 Identities=20% Similarity=0.294 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 120 ~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~-----------------------~~~~ 176 (288)
T cd05061 120 EMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET-----------------------DYYR 176 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccc-----------------------cccc
Confidence 56789999999999999999999999999999999999999999998754210 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||.+. +..++.++ |+||+ ||++||+++ +.+ |+
T Consensus 177 ~~~~~~~~~~y~~pE~~~---~~~~~~~~--Dvwsl--------------G~~l~el~~~~~~---------------p~ 222 (288)
T cd05061 177 KGGKGLLPVRWMAPESLK---DGVFTTSS--DMWSF--------------GVVLWEITSLAEQ---------------PY 222 (288)
T ss_pred ccCCCcccccccCHHHhc---cCCCChHh--HHHHH--------------HHHHHHHHhCCCC---------------CC
Confidence 122235577899999987 56778888 99999 999999654 222 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc------Ccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC------QPISL 235 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~------hp~f~ 235 (454)
.+....+....+........+.. ..+...+++ .+||+.||++|||+.++++ ||||.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 223 QGLSNEQVLKFVMDGGYLDQPDN-------------CPERVTDLM-----RMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence 22222333333322222222222 125677888 9999999999999999986 88887
Q ss_pred c
Q psy7309 236 E 236 (454)
Q Consensus 236 ~ 236 (454)
.
T Consensus 285 ~ 285 (288)
T cd05061 285 E 285 (288)
T ss_pred C
Confidence 4
No 265
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.89 E-value=1.2e-23 Score=204.25 Aligned_cols=154 Identities=19% Similarity=0.327 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++...... ....
T Consensus 120 ~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~-----------------------~~~~ 176 (277)
T cd05062 120 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-----------------------DYYR 176 (277)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCc-----------------------ceee
Confidence 46788999999999999999999999999999999999999999998754210 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+++.|+|||++. +..++.++ ||||+ ||++||+++ +.. |+
T Consensus 177 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~~~~---------------p~ 222 (277)
T cd05062 177 KGGKGLLPVRWMSPESLK---DGVFTTYS--DVWSF--------------GVVLWEIATLAEQ---------------PY 222 (277)
T ss_pred cCCCCccCHhhcChhHhh---cCCcCchh--HHHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 112245678899999987 56788888 99999 999999765 222 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.+.........+........+.. ..+...+++ .+||+.||++|||+.|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 223 QGMSNEQVLRFVMEGGLLDKPDN-------------CPDMLFELM-----RMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence 33333333333332222222222 124566777 99999999999999988753
No 266
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.89 E-value=1.2e-23 Score=204.31 Aligned_cols=159 Identities=28% Similarity=0.461 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++..... ...
T Consensus 102 ~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~-------------------------~~~ 156 (277)
T cd06640 102 QIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD-------------------------TQI 156 (277)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccC-------------------------Ccc
Confidence 5678999999999999999999999999999999999999999999875421 111
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......++..|+|||++. +..++.++ |+||+ |+++||+++|.++ +.
T Consensus 157 ~~~~~~~~~~y~apE~~~---~~~~~~~~--Dv~sl--------------G~il~el~tg~~p---------------~~ 202 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQ---QSAYDSKA--DIWSL--------------GITAIELAKGEPP---------------NS 202 (277)
T ss_pred ccccccCcccccCHhHhc---cCCCccHH--HHHHH--------------HHHHHHHHHCCCC---------------CC
Confidence 223356888999999987 55678888 99999 9999998776542 22
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
................+.++.. ......+++ .+||+.||++|||+.++++||||....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 203 DMHPMRVLFLIPKNNPPTLTGE-------------FSKPFKEFI-----DACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred CcChHhHhhhhhcCCCCCCchh-------------hhHHHHHHH-----HHHcccCcccCcCHHHHHhChHhhhcc
Confidence 2211111111111112111111 124566777 999999999999999999999998543
No 267
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.89 E-value=8.7e-24 Score=208.18 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=79.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 138 ~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~-----------------------~~~ 194 (304)
T cd05096 138 SSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAG-----------------------DYY 194 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccC-----------------------cee
Confidence 357899999999999999999999999999999999999999999998754210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK 141 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~ 141 (454)
.......+|..|+|||++. ...++.++ ||||+ |+++||++.
T Consensus 195 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~~l~el~~ 235 (304)
T cd05096 195 RIQGRAVLPIRWMAWECIL---MGKFTTAS--DVWAF--------------GVTLWEILM 235 (304)
T ss_pred EecCcCCCCccccCHHHHh---cCCCCchh--hhHHH--------------HHHHHHHHH
Confidence 1122345678899999987 56788888 99999 999999653
No 268
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.88 E-value=1.3e-23 Score=206.25 Aligned_cols=162 Identities=26% Similarity=0.424 Sum_probs=117.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++..... ..
T Consensus 115 ~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~-------------------------~~ 169 (293)
T cd06647 115 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-------------------------EQ 169 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccc-------------------------cc
Confidence 35788999999999999999999999999999999999999999998874421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+. ...++.++ |+||+ |+++|++++|.. |+
T Consensus 170 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Dv~sl--------------G~ll~~ll~g~~---------------pf 215 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVT---RKAYGPKV--DIWSL--------------GIMAIEMVEGEP---------------PY 215 (293)
T ss_pred cccccccCChhhcCchhhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1223457899999999987 56677778 99999 999999777654 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
...+.......+.....+.++.. ........+++ .+||+.||.+||++++++.||||....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 216 LNENPLRALYLIATNGTPELQNP-----------EKLSAIFRDFL-----NRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred CCCChhhheeehhcCCCCCCCCc-----------cccCHHHHHHH-----HHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 22111111111111111111110 11224566777 999999999999999999999998655
No 269
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.88 E-value=4e-23 Score=204.14 Aligned_cols=159 Identities=26% Similarity=0.360 Sum_probs=114.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 115 ~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~---------------------------- 166 (308)
T cd06634 115 VEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA---------------------------- 166 (308)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec----------------------------
Confidence 3578899999999999999999999999999999999999999999886432
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......||+.|+|||.+.......++.++ ||||+ ||++|++++|..+.
T Consensus 167 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~p~--------------- 214 (308)
T cd06634 167 -PANXFVGTPYWMAPEVILAMDEGQYDGKV--DVWSL--------------GITCIELAERKPPL--------------- 214 (308)
T ss_pred -CcccccCCccccCHHHHhhcccCCCCccc--chHHH--------------HHHHHHHHcCCCCC---------------
Confidence 11234688899999997522234567777 99999 99999987765421
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
...........+.....+..+.. ..+....++| ++||+.+|.+|||++++++|||+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~li-----~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 215 FNMNAMSALYHIAQNESPALQSG------------HWSEYFRNFV-----DSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred ccccHHHHHHHHhhcCCCCcCcc------------cccHHHHHHH-----HHHhhCCcccCCCHHHHhhCcccccc
Confidence 11111111111111111111111 1125566777 99999999999999999999999864
No 270
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.88 E-value=1.9e-23 Score=201.65 Aligned_cols=159 Identities=26% Similarity=0.357 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+..++.||+.||+|||++||+||||||+||+++. ++.+||+|||++..... ..
T Consensus 109 ~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-------------------------~~ 163 (268)
T cd06624 109 TIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG-------------------------IN 163 (268)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc-------------------------CC
Confidence 46778999999999999999999999999999976 67899999999874421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||++... ...++.++ |+||+ |++++++++++++....
T Consensus 164 ~~~~~~~~~~~~~aPE~~~~~-~~~~~~~~--Dv~sl--------------Gvvl~~l~~g~~p~~~~------------ 214 (268)
T cd06624 164 PCTETFTGTLQYMAPEVIDKG-PRGYGAPA--DIWSL--------------GCTIVEMATGKPPFIEL------------ 214 (268)
T ss_pred CccccCCCCccccChhhhccc-cccCCchh--hhHHH--------------HHHHHHHHhCCCCCccc------------
Confidence 122234678999999998621 23466777 99999 99999977765422100
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
..................+|.. ..+...+++ .+||+.+|.+|||+.|++.||||
T Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 215 -GEPQAAMFKVGMFKIHPEIPES-------------LSAEAKNFI-----LRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -cChhhhHhhhhhhccCCCCCcc-------------cCHHHHHHH-----HHHcCCCchhCCCHHHHHhCCCC
Confidence 0000000000000111122222 225667788 99999999999999999999997
No 271
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.88 E-value=4.1e-23 Score=202.57 Aligned_cols=161 Identities=25% Similarity=0.349 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+.+++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++..+.. .
T Consensus 115 ~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~--------------------------~ 168 (296)
T cd06618 115 ILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD--------------------------S 168 (296)
T ss_pred HHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccC--------------------------C
Confidence 467899999999999997 6999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccc-cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGV-KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~-~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+.... ...++.++ |+||+ |+++|++++|+.+.
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~p~-------------- 218 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRA--DVWSL--------------GISLVELATGQFPY-------------- 218 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccch--hHHHH--------------HHHHHHHHhCCCCC--------------
Confidence 1122345788999999986221 23477778 99999 99999977765421
Q ss_pred CCCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 161 STGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 161 ~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
... ...+.+.+.........+.. ........+++ .+||..||.+|||+++++.||||..
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 219 -KNCKTEFEVLTKILQEEPPSLPPN-----------EGFSPDFCSFV-----DLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred -CcchhHHHHHHHHhcCCCCCCCCC-----------CCCCHHHHHHH-----HHHccCChhhCCCHHHHhcChhhhc
Confidence 110 00111112211221111111 01225567777 9999999999999999999999984
No 272
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed
Probab=99.88 E-value=6e-23 Score=222.42 Aligned_cols=155 Identities=10% Similarity=0.078 Sum_probs=137.4
Q ss_pred HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCe
Q psy7309 289 CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSI 362 (454)
Q Consensus 289 ~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~ 362 (454)
.|.+..+++.+++ |..+.++++|++.++++|.++||.+|.||+||+.+++..+ .++||.|.|.+|+.
T Consensus 254 ~~~~~~~G~~~~l-------p~~~~~~~~i~~~~~~~~~~~Gy~ei~tP~le~~~l~~~~g~~~~~~~~my~~~d~~~~~ 326 (638)
T PRK00413 254 HFQEEAPGLPFWH-------PKGWTIRRELERYIRRKLRKAGYQEVKTPQILDRELWETSGHWDHYRENMFPTTESDGEE 326 (638)
T ss_pred EecCCCCcceEEc-------ccHHHHHHHHHHHHHHHHHHCCCEEEECCeeCCHHHHHhcCChhhhhhccceeecCCCcE
Confidence 4677777788777 7888899999999999999999999999999999998642 36799999999999
Q ss_pred EeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCCCC--C--ccceEEEEEEEEEcCCCCcc-cH-HHHHHHHH
Q psy7309 363 VTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRVLG--F--HPRELYECAFDIVTNTPGVL-TM-GSLRRCLM 433 (454)
Q Consensus 363 ~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~~~--g--~~rE~~Q~g~eiig~~~~~~-~d-~e~~~~~~ 433 (454)
++|||+.|.++||+++.+.. ..|+|+||+|+|||+++++. | |.|||+|+|+|++|.+ +.. +| +|++.++.
T Consensus 327 ~~LRP~~~~~~~r~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~~~g~~-~~~~~e~~eii~l~~ 405 (638)
T PRK00413 327 YALKPMNCPGHVQIYKQGLRSYRDLPLRLAEFGTVHRYEPSGALHGLMRVRGFTQDDAHIFCTP-EQIEEEVKKVIDLIL 405 (638)
T ss_pred EEEecCCcHHHHHHHhCcCCChhhCCceeeeccCeecCCCCCCCcCcceeeeeEEeeEEEEcCH-HHHHHHHHHHHHHHH
Confidence 99999999999999986532 46999999999999998862 4 9999999999999987 444 46 99999999
Q ss_pred HHHHhCCCCCcEEEcCcc
Q psy7309 434 GSFRRFNYGNISFAPHPR 451 (454)
Q Consensus 434 ~~l~~~~~~~~~i~i~~~ 451 (454)
++|+.+|++++.+++|+|
T Consensus 406 ~~~~~lg~~~~~i~l~~r 423 (638)
T PRK00413 406 DVYKDFGFEDYEVKLSTR 423 (638)
T ss_pred HHHHHcCCceEEEEEecC
Confidence 999999999999999997
No 273
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.88 E-value=2.2e-23 Score=203.10 Aligned_cols=169 Identities=21% Similarity=0.290 Sum_probs=112.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++..+.... ...
T Consensus 109 ~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------~~~ 166 (284)
T cd05079 109 KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK----------------------EYY 166 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc----------------------cce
Confidence 4678999999999999999999999999999999999999999999988543210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||++. +..++.++ ||||+ |++++|+++++............ ..+|.
T Consensus 167 ~~~~~~~~~~~y~apE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~~~~~~~~~~~~~~-~~~~~ 226 (284)
T cd05079 167 TVKDDLDSPVFWYAPECLI---QSKFYIAS--DVWSF--------------GVTLYELLTYCDSESSPMTLFLK-MIGPT 226 (284)
T ss_pred eecCCCCCCccccCHHHhc---cCCCCccc--cchhh--------------hhhhhhhhcCCCCCccccchhhh-hcccc
Confidence 1122345778899999987 56688888 99999 99999987644321111111111 11222
Q ss_pred CCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+. ........+........+. ..+....+|+ .+||+.||.+|||+.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~li-----~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 227 HGQMTVTRLVRVLEEGKRLPRPP-------------NCPEEVYQLM-----RKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred cccccHHHHHHHHHcCccCCCCC-------------CCCHHHHHHH-----HHHccCCcccCcCHHHHHH
Confidence 211 1112222222111111111 1235667777 9999999999999998876
No 274
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.88 E-value=2e-23 Score=201.38 Aligned_cols=153 Identities=18% Similarity=0.208 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 114 ~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~-----------------------~~~~ 170 (273)
T cd05035 114 TLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSG-----------------------DYYR 170 (273)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeecccc-----------------------cccc
Confidence 57889999999999999999999999999999999999999999998754311 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. ...++.++ ||||+ ||++||+++ +.+ |+
T Consensus 171 ~~~~~~~~~~~~~pe~~~---~~~~~~~~--Dv~Sl--------------G~il~el~~~g~~---------------p~ 216 (273)
T cd05035 171 QGRIAKMPVKWIAIESLA---DRVYTSKS--DVWAF--------------GVTMWEIATRGQT---------------PY 216 (273)
T ss_pred ccccccCCccccCHhhcc---cCCCCccc--chHHH--------------HHHHHHHHhCCCC---------------CC
Confidence 111233467899999987 66788888 99999 999999765 332 23
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+....+....+........+.. .+....+++ .+||+.||++|||+.|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 217 PGVENHEIYDYLRHGNRLKQPED-------------CLDELYDLM-----YSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred CCCCHHHHHHHHHcCCCCCCCcC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 23223333333333333222322 225667777 9999999999999998876
No 275
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.88 E-value=4.7e-23 Score=200.16 Aligned_cols=180 Identities=29% Similarity=0.423 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..... .
T Consensus 99 ~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~--------------------------~ 152 (283)
T cd07830 99 SVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS--------------------------R 152 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccC--------------------------C
Confidence 46788999999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......|+..|+|||++.. ...++.++ |+||+ |++++|++++.+. ..+.+......
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~--~~~~~~~~--Di~s~--------------G~~l~el~~g~~~~~~~~~~~~~~~~~~~ 214 (283)
T cd07830 153 PPYTDYVSTRWYRAPEILLR--STSYSSPV--DIWAL--------------GCIMAELYTLRPLFPGSSEIDQLYKICSV 214 (283)
T ss_pred CCcCCCCCcccccCceeeec--CcCcCCcc--chhhH--------------HHHHHHHHhCCCccCCCChHHHHHHHHHh
Confidence 12234578899999999862 34567777 99999 9999998776542 12233222222
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...|... .+....... ......++...+ ......... ..+...+++ ++||+.||.+|||++|++.||||
T Consensus 215 ~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~li-----~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 215 LGTPTKQ-DWPEGYKLA-SKLGFRFPQFAP-TSLHQLIPN-ASPEAIDLI-----KDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cCCCChh-hhhhHhhhh-cccccccccccc-ccHHHHccc-CCHHHHHHH-----HHhcccCcccCCCHHHHhhCCCC
Confidence 2222221 111111100 011111111110 000000111 135566677 99999999999999999999997
No 276
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.88 E-value=2.2e-23 Score=199.23 Aligned_cols=155 Identities=25% Similarity=0.380 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.||+|+||||+||+++.++.+||+|||++..... .
T Consensus 102 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~--------------------------~ 155 (258)
T cd06632 102 PVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE--------------------------F 155 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccc--------------------------c
Confidence 35778999999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccc-cccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKA-MYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~-~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
.......|+..|+|||.+. .. .++.++ |+||+ |+++|++++|+++
T Consensus 156 ~~~~~~~~~~~y~~pe~~~---~~~~~~~~~--D~~sl--------------G~~l~~l~~g~~p--------------- 201 (258)
T cd06632 156 SFAKSFKGSPYWMAPEVIA---QQGGYGLAA--DIWSL--------------GCTVLEMATGKPP--------------- 201 (258)
T ss_pred ccccccCCCcceeCHHHhc---CCCCCCchh--hhHHH--------------HHHHHHHHhCCCC---------------
Confidence 1233457899999999987 33 377788 99999 9999998776542
Q ss_pred CCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 161 STGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
+.............. .....++.. .++...+++ ++||+.||.+|||+.+++.|||+
T Consensus 202 f~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 202 WSQLEGVAAVFKIGRSKELPPIPDH-------------LSDEAKDFI-----LKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred cccCcHHHHHHHHHhcccCCCcCCC-------------cCHHHHHHH-----HHHhhcCcccCcCHHHHhcCCCC
Confidence 111111111111111 111112211 236667788 99999999999999999999996
No 277
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.88 E-value=2.3e-23 Score=202.05 Aligned_cols=154 Identities=18% Similarity=0.249 Sum_probs=111.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++...... ...
T Consensus 122 ~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~-----------------------~~~ 178 (280)
T cd05049 122 SQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTT-----------------------DYY 178 (280)
T ss_pred HHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccC-----------------------cce
Confidence 357889999999999999999999999999999999999999999998754210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......+++.|+|||++. +..++.++ ||||+ |+++|||++ |.. |
T Consensus 179 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~e~~~~g~~---------------p 224 (280)
T cd05049 179 RVGGHTMLPIRWMPPESIM---YRKFTTES--DVWSF--------------GVVLWEIFTYGKQ---------------P 224 (280)
T ss_pred ecCCCCcccceecChhhhc---cCCcchhh--hHHHH--------------HHHHHHHHhcCCC---------------C
Confidence 1123345678899999987 67788888 99999 999999765 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.||++|||+.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 225 WYGLSNEEVIECITQGRLLQRPRT-------------CPSEVYDIM-----LGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCCCHHHHHH
Confidence 222222222222222222222221 125667888 9999999999999998875
No 278
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.88 E-value=4.1e-23 Score=198.21 Aligned_cols=165 Identities=26% Similarity=0.391 Sum_probs=116.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||.|||+.||+|+||||+||+++.++.+||+|||++........ ...
T Consensus 99 ~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~---------------------~~~ 157 (264)
T cd06626 99 HVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT---------------------TMG 157 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC---------------------ccc
Confidence 46788999999999999999999999999999999999999999999886532100 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......++..|+|||++.......++.++ ||||+ |++++++++|+.+ +
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~--Dv~s~--------------G~il~~l~~g~~p---------------f 206 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAA--DIWSL--------------GCVVLEMATGKRP---------------W 206 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCccc--chHHH--------------HHHHHHHHhCCCC---------------c
Confidence 112235678999999998732223367777 99999 9999997765542 2
Q ss_pred CCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
... ................+|... ..++...+++ ++||+.||.+|||+.|++.|||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~li-----~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 207 SELDNEFQIMFHVGAGHKPPIPDSL-----------QLSPEGKDFL-----DRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred cCCcchHHHHHHHhcCCCCCCCccc-----------ccCHHHHHHH-----HHHccCCcccCCCHHHHhcCCCC
Confidence 111 111111111112222333321 1235667788 99999999999999999999996
No 279
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.88 E-value=2.4e-23 Score=203.81 Aligned_cols=181 Identities=27% Similarity=0.355 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++.++.||+.||+|||++|++||||||+||+++. ++.+||+|||++..... ..
T Consensus 103 ~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~-------------------------~~ 157 (294)
T PLN00009 103 LIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI-------------------------PV 157 (294)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCC-------------------------Cc
Confidence 46789999999999999999999999999999985 45799999999975421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
...+...|++.|+|||++.. ...++.++ |+||+ |++++++++|.+. ..+.+...+..
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~--~~~~~~~~--Dv~sl--------------G~i~~~l~tg~~pf~~~~~~~~~~~~~~~ 219 (294)
T PLN00009 158 RTFTHEVVTLWYRAPEILLG--SRHYSTPV--DIWSV--------------GCIFAEMVNQKPLFPGDSEIDELFKIFRI 219 (294)
T ss_pred cccccCceeecccCHHHHhC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 12234577899999999861 34567777 99999 9999998776652 12222222222
Q ss_pred cCCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 157 ENGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 157 ~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
...|..... ....+..+. ...+.... .... ......++.+.+++ .+||+.||++|||+.++++||||.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~-~~~~~~~~~~~~~i-----~~~l~~~P~~Rps~~~~l~~~~~~ 288 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYK----SAFPKWPP-KDLA-TVVPTLEPAGVDLL-----SKMLRLDPSKRITARAALEHEYFK 288 (294)
T ss_pred hCCCChhhccccccchhhh----hhcccCCC-CCHH-HhCcCCChHHHHHH-----HHHccCChhhCcCHHHHhcCchHh
Confidence 222211110 000000000 00010000 0000 00112236667788 999999999999999999999998
Q ss_pred cC
Q psy7309 236 EG 237 (454)
Q Consensus 236 ~~ 237 (454)
..
T Consensus 289 ~~ 290 (294)
T PLN00009 289 DL 290 (294)
T ss_pred HH
Confidence 54
No 280
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.88 E-value=2.2e-23 Score=204.07 Aligned_cols=154 Identities=16% Similarity=0.213 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ...
T Consensus 123 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~-----------------------~~~ 179 (291)
T cd05094 123 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST-----------------------DYY 179 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCC-----------------------cee
Confidence 357889999999999999999999999999999999999999999999754210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......|+..|+|||++. +..++.++ ||||+ |+++|||++ |.+ |
T Consensus 180 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~t~g~~---------------p 225 (291)
T cd05094 180 RVGGHTMLPIRWMPPESIM---YRKFTTES--DVWSF--------------GVILWEIFTYGKQ---------------P 225 (291)
T ss_pred ecCCCCCcceeecChHHhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1223456788999999987 56788888 99999 999999765 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.||++|||++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 226 WFQLSNTEVIECITQGRVLERPRV-------------CPKEVYDIM-----LGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CCCCCHHHHHHHHhCCCCCCCCcc-------------CCHHHHHHH-----HHHcccChhhCcCHHHHHH
Confidence 222222222222222221111111 125566788 9999999999999998875
No 281
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.88 E-value=2.9e-23 Score=198.99 Aligned_cols=154 Identities=31% Similarity=0.403 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|+++||.|||++|++|+||||+||+++.++.++|+|||++..... .
T Consensus 100 ~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~--------------------------~ 153 (258)
T cd05578 100 EQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP--------------------------D 153 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCC--------------------------C
Confidence 35788999999999999999999999999999999999999999999875421 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||++. ...++.++ |+||+ |+++|++++|..+ +
T Consensus 154 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~g~~p---------------~ 199 (258)
T cd05578 154 TLTTSTSGTPGYMAPEVLC---RQGYSVAV--DWWSL--------------GVTAYECLRGKRP---------------Y 199 (258)
T ss_pred ccccccCCChhhcCHHHHc---ccCCCCcc--cchhh--------------HHHHHHHHhCCCC---------------C
Confidence 1223456888999999987 45578888 99999 9999997765431 1
Q ss_pred CCch---hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh--hhhhcCccc
Q psy7309 162 TGSN---VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS--EQNLCQPIS 234 (454)
Q Consensus 162 ~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta--~e~l~hp~f 234 (454)
.... ......... .....+|... +....++| .+||+.||.+||++ +|+++||||
T Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~~i-----~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 200 RGHSRTIRDQIRAKQE-TADVLYPATW-------------STEAIDAI-----NKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred CCCCccHHHHHHHHhc-cccccCcccC-------------cHHHHHHH-----HHHccCChhHcCCccHHHHhcCCCC
Confidence 1111 111111111 1222233221 25666788 99999999999999 999999998
No 282
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.88 E-value=2.4e-23 Score=198.98 Aligned_cols=155 Identities=29% Similarity=0.393 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC-eEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH-VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~-vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++.++.|++.||.|||++|++|+||||+||+++.++. +||+|||.+..... ..
T Consensus 102 ~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~-------------------------~~ 156 (257)
T cd08225 102 QILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND-------------------------SM 156 (257)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC-------------------------Cc
Confidence 57889999999999999999999999999999998864 69999999875431 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||++. ...++.++ |+||+ |+++++++++.. |+
T Consensus 157 ~~~~~~~~~~~~~ape~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~---------------p~ 202 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQ---NRPYNNKT--DIWSL--------------GCVLYELCTLKH---------------PF 202 (257)
T ss_pred ccccccCCCccccCHHHHc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1122346899999999987 45677778 99999 999999776543 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+..+.............+. ..+....+++ .+||..+|++|||++|+++||||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i-----~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 203 EGNNLHQLVLKICQGYFAPISP-------------NFSRDLRSLI-----SQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CCccHHHHHHHHhcccCCCCCC-------------CCCHHHHHHH-----HHHhccChhhCcCHHHHhhCCCC
Confidence 2222222222222111111111 1225667787 99999999999999999999997
No 283
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.88 E-value=1.6e-23 Score=203.27 Aligned_cols=180 Identities=28% Similarity=0.402 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++..... ...
T Consensus 100 ~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~------------------------~~~ 155 (287)
T cd07840 100 SQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTK------------------------RNS 155 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccC------------------------CCc
Confidence 46789999999999999999999999999999999999999999999875532 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
...+...++..|+|||.+.. ...++.++ ||||+ |++++|++++.+.. ...+......
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~--~~~~~~~~--Dv~sl--------------G~~l~el~t~~~p~~~~~~~~~~~~~~~~ 217 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLG--ATRYGPEV--DMWSV--------------GCILAELFLGKPIFQGSTELEQLEKIFEL 217 (287)
T ss_pred ccccccccccccCCceeeEc--cccCChHH--HHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 12334567889999998761 34567777 99999 99999977765421 1111111111
Q ss_pred cCCCCCCchhhhhhh--hhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 157 ENGPSTGSNVQKSLQ--KFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~--~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
...|... .+..... .... ......+... ........++...+++ ++||..||.+|||+++++.|||
T Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i-----~~~l~~~P~~Rp~~~~~l~~~~ 286 (287)
T cd07840 218 CGSPTDE-NWPGVSKLPWFENLKPKKPYKRRL-----REFFKHLIDPSALDLL-----DKLLTLDPKKRISADQALQHEY 286 (287)
T ss_pred hCCCchh-hccccccchhhhhccccccchhHH-----HHHhcccCCHHHHHHH-----HHHcCCChhhCcCHHHHhhCcC
Confidence 1111111 0000000 0000 0000000000 0011111235566666 9999999999999999999999
Q ss_pred c
Q psy7309 234 S 234 (454)
Q Consensus 234 f 234 (454)
|
T Consensus 287 ~ 287 (287)
T cd07840 287 F 287 (287)
T ss_pred C
Confidence 7
No 284
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.88 E-value=2e-23 Score=200.28 Aligned_cols=155 Identities=19% Similarity=0.223 Sum_probs=113.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.+++++.|++.||+|||++||+||||||.||+++.++.+||+|||++....... ...
T Consensus 95 ~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~----------------------~~~ 152 (257)
T cd05116 95 KNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADE----------------------NYY 152 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCC----------------------Cee
Confidence 4678899999999999999999999999999999999999999999987543210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ |+||+ |+++||+++ +.+ |
T Consensus 153 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~t~g~~---------------p 198 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMN---YYKFSSKS--DVWSF--------------GVLMWEAFSYGQK---------------P 198 (257)
T ss_pred eecCCCCCCccccCHhHhc---cCCcCchh--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1122234568899999987 56677788 99999 999999764 432 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........|... ++.+.++| .+||+.||++|||++++..
T Consensus 199 ~~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 199 YKGMKGNEVTQMIESGERMECPQRC-------------PPEMYDLM-----KLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCC-------------CHHHHHHH-----HHHhccCchhCcCHHHHHH
Confidence 3333333334444433333333332 26677888 9999999999999997764
No 285
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.88 E-value=2.1e-23 Score=203.85 Aligned_cols=154 Identities=17% Similarity=0.214 Sum_probs=111.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+|||++.++.+||+|||++...... ...
T Consensus 120 ~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-----------------------~~~ 176 (288)
T cd05093 120 SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST-----------------------DYY 176 (288)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCC-----------------------cee
Confidence 357889999999999999999999999999999999999999999998754210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ |+||+ ||++++|++ +.+ |
T Consensus 177 ~~~~~~~~~~~y~aPE~~~---~~~~~~~s--Diwsl--------------G~il~~l~t~g~~---------------p 222 (288)
T cd05093 177 RVGGHTMLPIRWMPPESIM---YRKFTTES--DVWSL--------------GVVLWEIFTYGKQ---------------P 222 (288)
T ss_pred ecCCCCCccccccCHHHhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1122345678899999987 56778888 99999 999999775 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+..+.....+.. .+..+.+++ .+||+.||.+|||+.|++.
T Consensus 223 ~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 223 WYQLSNNEVIECITQGRVLQRPRT-------------CPKEVYDLM-----LGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHccCChhhCCCHHHHHH
Confidence 222222223333332222222221 125667788 9999999999999998754
No 286
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.88 E-value=2.3e-23 Score=202.37 Aligned_cols=154 Identities=19% Similarity=0.213 Sum_probs=108.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 109 ~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~-----------------------~~ 165 (279)
T cd05109 109 QDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE-----------------------TE 165 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccc-----------------------ce
Confidence 3678899999999999999999999999999999999999999999988543110 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ ||||+ ||++||+++ +.+ |
T Consensus 166 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~~l~el~t~g~~---------------p 211 (279)
T cd05109 166 YHADGGKVPIKWMALESIL---HRRFTHQS--DVWSY--------------GVTVWELMTFGAK---------------P 211 (279)
T ss_pred eecCCCccchhhCCHHHhc---cCCCCchh--HHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1112234567899999987 56788888 99999 999999654 332 1
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.||++|||+.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 212 YDGIPAREIPDLLEKGERLPQPPI-------------CTIDVYMIM-----VKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CCCCCHHHHHHHHHCCCcCCCCcc-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 211111111112221212211211 125566777 9999999999999999884
No 287
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.88 E-value=2.9e-23 Score=202.07 Aligned_cols=154 Identities=18% Similarity=0.206 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++..... ...
T Consensus 109 ~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~-----------------------~~~ 165 (279)
T cd05111 109 QRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD-----------------------DKK 165 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC-----------------------Ccc
Confidence 357889999999999999999999999999999999999999999999754210 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......|+..|+|||.+. +..|+.++ ||||+ |+++||+++ |.. |
T Consensus 166 ~~~~~~~~~~~y~~pE~~~---~~~~~~~~--Dv~sl--------------G~il~el~t~g~~---------------p 211 (279)
T cd05111 166 YFYSEHKTPIKWMALESIL---FGRYTHQS--DVWSY--------------GVTVWEMMSYGAE---------------P 211 (279)
T ss_pred cccCCCCCcccccCHHHhc---cCCcCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1223345777899999987 56788888 99999 999999765 432 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. ......+++ .+||..||++|||+.|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 212 YAGMRPHEVPDLLEKGERLAQPQI-------------CTIDVYMVM-----VKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCCCCHHHHHHHHHCCCcCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCcCHHHHHH
Confidence 222222222222222222222221 114455677 9999999999999998765
No 288
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.88 E-value=7.4e-23 Score=204.69 Aligned_cols=183 Identities=28% Similarity=0.413 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++......... ....
T Consensus 108 ~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~--------------------~~~~ 167 (337)
T cd07852 108 HKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN--------------------PENP 167 (337)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc--------------------ccCc
Confidence 56779999999999999999999999999999999999999999999855321000 0112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhhc
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRRE 157 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~~ 157 (454)
.....+||..|+|||++.. ...++.++ |+||+ |+++|++++|++. ........+...
T Consensus 168 ~~~~~~~~~~y~aPE~~~~--~~~~~~~s--Di~sl--------------G~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 229 (337)
T cd07852 168 VLTDYVATRWYRAPEILLG--STRYTKGV--DMWSV--------------GCILGEMLLGKPLFPGTSTLNQLEKIIEVI 229 (337)
T ss_pred chhcccccccccCceeeec--cccccccc--hHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 3344678999999998762 34567777 99999 9999997776642 122222222221
Q ss_pred CCCCCCchhhh--------hhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 158 NGPSTGSNVQK--------SLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 158 ~~p~~~~~~~~--------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
+.+. ...... .+..+.......+... ... .+....+++ .+||+.||++|||+.+++
T Consensus 230 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~l~~li-----~~~l~~~P~~Rps~~~il 293 (337)
T cd07852 230 GPPS-AEDIESIKSPFAATMLDSLPSRPRKPLDEL---------LPK-ASDDALDLL-----KKLLVFNPNKRLTAEEAL 293 (337)
T ss_pred CCCC-HHHHHHHHhhhHHHhhhhcccccccchhhh---------ccC-CCHHHHHHH-----HHhccCCcccccCHHHHh
Confidence 1111 111110 0111111111111111 111 236667777 999999999999999999
Q ss_pred cCcccccCCC
Q psy7309 230 CQPISLEGSS 239 (454)
Q Consensus 230 ~hp~f~~~~~ 239 (454)
+|||+.....
T Consensus 294 ~~~~~~~~~~ 303 (337)
T cd07852 294 EHPYVAQFHN 303 (337)
T ss_pred hChhhhhhcc
Confidence 9999987543
No 289
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.88 E-value=3e-23 Score=197.61 Aligned_cols=156 Identities=26% Similarity=0.386 Sum_probs=115.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..... ..
T Consensus 99 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~-------------------------~~ 153 (254)
T cd06627 99 SLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLND-------------------------VS 153 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCC-------------------------Cc
Confidence 45788999999999999999999999999999999999999999999985532 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||... +..++.++ |+||+ |+++++++++..+ +
T Consensus 154 ~~~~~~~~~~~y~~pe~~~---~~~~~~~~--Dv~~l--------------G~~l~~l~~g~~p---------------~ 199 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIE---MSGASTAS--DIWSL--------------GCTVIELLTGNPP---------------Y 199 (254)
T ss_pred ccccccccchhhcCHhhhc---CCCCCcch--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1133457889999999987 44577777 99999 9999997765532 1
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...................++.. .+....+++ .+||..+|++|||+.|++.||||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 200 YDLNPMAALFRIVQDDHPPLPEG-------------ISPELKDFL-----MQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCccHHHHHHHHhccCCCCCCCC-------------CCHHHHHHH-----HHHHhCChhhCcCHHHHhcCCCC
Confidence 11111111111211222222222 225667788 99999999999999999999997
No 290
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.88 E-value=3e-23 Score=201.81 Aligned_cols=182 Identities=30% Similarity=0.373 Sum_probs=115.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.||+.||+|||+.||+|+||||+||+++.++.+||+|||++..... ..
T Consensus 100 ~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~-------------------------~~ 154 (286)
T cd07846 100 SRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA-------------------------PG 154 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccC-------------------------Cc
Confidence 46788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
...+...|+..|+|||++.. ...++.++ ||||+ |++++|+++|++.. .+.+......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~~l~el~~g~~~~~~~~~~~~~~~~~~~ 216 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVG--DTKYGRAV--DIWAV--------------GCLVTEMLTGEPLFPGDSDIDQLYHIIKC 216 (286)
T ss_pred cccCcccceeeccCcHHhcc--ccccCchH--hHHHH--------------HHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence 22344578999999999862 34566777 99999 99999987765421 1222121111
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.+.... .................+........... ....+....+++ .+||+.||.+|||+.++++||||
T Consensus 217 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li-----~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 217 -LGNLIP-RHQEIFQKNPLFAGMRLPEVKEIEPLEKR-FPKLSGLVLDLA-----KQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred -hCCCch-hhHHHhccchHhhccccccccCcchHHHh-CCCcCHHHHHHH-----HHHhcCCcccchhHHHHhcCCCC
Confidence 011000 00000000000000011110000000000 011235566777 99999999999999999999998
No 291
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.88 E-value=1.5e-23 Score=229.86 Aligned_cols=161 Identities=29% Similarity=0.395 Sum_probs=114.8
Q ss_pred hhHHHHHHHHHHHHHHHHHc-------CCcccCCCCCcEEEccC-----------------CCeEEecccchhhhhhhcC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQ-------GIIHRDLKPVNIFIDYE-----------------DHVKIGDFGLATNILQKHA 57 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~-------giiHrDLKp~NILl~~~-----------------~~vKL~DFGla~~~~~~~~ 57 (454)
..++.|+.||+.||.|||+. +||||||||+|||++.. +.+||+|||++..+..
T Consensus 118 ~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~--- 194 (1021)
T PTZ00266 118 HAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI--- 194 (1021)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccc---
Confidence 35889999999999999984 49999999999999642 3489999999975421
Q ss_pred CCccccccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeee
Q psy7309 58 GPLARELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKA 137 (454)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~ 137 (454)
.......+||+.|+|||++... ...|+.++ ||||| ||++|
T Consensus 195 -----------------------~s~~~s~vGTp~YmAPEvL~ge-~~~~s~KS--DVWSL--------------G~ILY 234 (1021)
T PTZ00266 195 -----------------------ESMAHSCVGTPYYWSPELLLHE-TKSYDDKS--DMWAL--------------GCIIY 234 (1021)
T ss_pred -----------------------cccccccCCCccccCHHHHhcc-CCCCCchh--HHHHH--------------HHHHH
Confidence 1123345899999999998621 34577788 99999 99999
Q ss_pred eecCCchhhHHHHHHHhhhcCCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcC
Q psy7309 138 EVYKDRPKTLEELKHNIRRENGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLN 216 (454)
Q Consensus 138 el~~~~~~~~~~l~~~i~~~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~ 216 (454)
||++|..+ +.... ....+..+.... .++.. ..+..+.+|| ..||.
T Consensus 235 ELLTGk~P---------------F~~~~~~~qli~~lk~~p--~lpi~------------~~S~eL~dLI-----~~~L~ 280 (1021)
T PTZ00266 235 ELCSGKTP---------------FHKANNFSQLISELKRGP--DLPIK------------GKSKELNILI-----KNLLN 280 (1021)
T ss_pred HHHHCCCC---------------CCcCCcHHHHHHHHhcCC--CCCcC------------CCCHHHHHHH-----HHHhc
Confidence 98776542 21111 111222222111 11111 1125667788 99999
Q ss_pred CCCCCCCChhhhhcCcccccCCC
Q psy7309 217 HDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 217 ~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
.+|.+|||+.|+|.|||+....+
T Consensus 281 ~dPeeRPSa~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 281 LSAKERPSALQCLGYQIIKNVGP 303 (1021)
T ss_pred CChhHCcCHHHHhccHHHhhcCC
Confidence 99999999999999999986544
No 292
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.88 E-value=3.6e-23 Score=197.51 Aligned_cols=155 Identities=23% Similarity=0.316 Sum_probs=115.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||.+...... ...
T Consensus 105 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~-----------------------~~~ 161 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD-----------------------DYY 161 (262)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc-----------------------ccc
Confidence 468899999999999999999999999999999999999999999999865321 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC-chhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD-RPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~-~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ ||||+ |+++|+++++ .. |
T Consensus 162 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~g~~---------------p 207 (262)
T cd00192 162 RKKTGGKLPIRWMAPESLK---DGIFTSKS--DVWSF--------------GVLLWEIFTLGAT---------------P 207 (262)
T ss_pred ccccCCCcCccccCHHHhc---cCCcchhh--ccHHH--------------HHHHHHHHhcCCC---------------C
Confidence 2234456788999999987 45788888 99999 9999997652 32 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+...........+........+.. .++...+++ .+||+.||.+|||+.|++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 208 YPGLSNEEVLEYLRKGYRLPKPEY-------------CPDELYELM-----LSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCcc-------------CChHHHHHH-----HHHccCCcccCcCHHHHHHh
Confidence 333333333333333323333332 136677888 99999999999999988864
No 293
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.88 E-value=3.1e-23 Score=198.53 Aligned_cols=167 Identities=31% Similarity=0.357 Sum_probs=118.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.+++||+.||+|||++|++|+||+|+||+++.++.+||+|||++.......... .....
T Consensus 93 ~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----------------~~~~~ 155 (265)
T cd05579 93 DVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQIN-----------------LNDDE 155 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccc-----------------ccccc
Confidence 3678899999999999999999999999999999999999999999987532110000 00011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......++..|+|||+.. ...++.+. |+||+ |++++++++|.. |+
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~---~~~~~~~~--Dv~sl--------------G~~~~~l~~g~~---------------p~ 201 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVIL---GQGHSKTV--DWWSL--------------GCILYEFLVGIP---------------PF 201 (265)
T ss_pred ccccCcccCccccCHHHhc---CCCCCcch--hhHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1234457888999999987 45577777 99999 999999776543 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh---hhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS---EQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta---~e~l~hp~f~~ 236 (454)
...........+.. ....++... ..+....+++ ++||+.+|++|||+ .++|+||||..
T Consensus 202 ~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~i-----~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 202 HGETPEEIFQNILN-GKIEWPEDV-----------EVSDEAIDLI-----SKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred CCCCHHHHHHHHhc-CCcCCCccc-----------cCCHHHHHHH-----HHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 22222222222222 122222221 0135667777 99999999999999 99999999974
No 294
>KOG1290|consensus
Probab=99.88 E-value=2.6e-23 Score=205.93 Aligned_cols=127 Identities=18% Similarity=0.205 Sum_probs=76.0
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----------hhHHHHH
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----------KTLEELK 151 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----------~~~~~l~ 151 (454)
..+..++|..|+|||++. +.+|+..+ ||||+ +|++|||.+|.. ...+.+.
T Consensus 407 hFT~DIQTRQYRapEVll---GsgY~~~A--DiWS~--------------AC~~FELaTGDyLFePhsG~~Y~rDEDHiA 467 (590)
T KOG1290|consen 407 HFTEDIQTRQYRAPEVLL---GSGYSTSA--DIWST--------------ACMAFELATGDYLFEPHSGENYSRDEDHIA 467 (590)
T ss_pred hhchhhhhhhccCcceee---cCCCCCch--hHHHH--------------HHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence 345679999999999999 89999999 99999 777777666332 2333344
Q ss_pred HHhhhcCCCC-----CCchhhhhhhhhccCCCCCCCccc----------cccccccccccccccchhHHHHHHHHhhhcC
Q psy7309 152 HNIRRENGPS-----TGSNVQKSLQKFQKSPPSVYREWR----------SSFEWSTVRNNIKSNFQHFLILIHQQKWCLN 216 (454)
Q Consensus 152 ~~i~~~~~p~-----~~~~~~~~~~~~~~~~~~~~p~~~----------~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~ 216 (454)
.+|..++.-+ .+.-.+.. |...+...-...+ ..+.|+. ....+..+|| .-||+
T Consensus 468 ~i~ELLG~iPr~ia~~Gk~SRdF---Fnr~G~LrhI~~LK~WpL~~VL~eKY~~s~----e~A~~fsdFL-----~PmLe 535 (590)
T KOG1290|consen 468 LIMELLGKIPRKIALGGKYSRDF---FNRRGELRHIRRLKPWPLYEVLIEKYEWSE----EDAQQFSDFL-----SPMLE 535 (590)
T ss_pred HHHHHHhhccHHHHhcCcchHhh---hccccceecccccCCCcHHHHHHHHhCCCH----HHHHHHHHHH-----HHHHh
Confidence 4433222211 11111111 1111111111111 1122332 1113334455 99999
Q ss_pred CCCCCCCChhhhhcCcccccCCCC
Q psy7309 217 HDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 217 ~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
.+|.+||||.++|+|||+.....+
T Consensus 536 f~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 536 FDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred cCccccccHHHHhcCccccCCCCC
Confidence 999999999999999999976654
No 295
>KOG0695|consensus
Probab=99.88 E-value=2.4e-23 Score=197.66 Aligned_cols=181 Identities=24% Similarity=0.266 Sum_probs=140.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.+..+|+.||+|||+.|||.||||.+|+|++..|++||.|+|.++.-. ..+
T Consensus 351 eharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l-------------------------~~g 405 (593)
T KOG0695|consen 351 EHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL-------------------------GPG 405 (593)
T ss_pred HHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC-------------------------CCC
Confidence 3578899999999999999999999999999999999999999999998421 234
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....+++|||.|.|||++. +..|+.++ |.|+| |+++|||+.|+.+. ...+.--
T Consensus 406 d~tstfcgtpnyiapeilr---geeygfsv--dwwal--------------gvlmfemmagrspf--------divgm~n 458 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILR---GEEYGFSV--DWWAL--------------GVLMFEMMAGRSPF--------DIVGMDN 458 (593)
T ss_pred cccccccCCCcccchhhhc---ccccCcee--hHHHH--------------HHHHHHHHcCCCCc--------ceecCCC
Confidence 4556789999999999999 89999999 99999 99999977766421 0112222
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC------hhhhhcCcccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS------SEQNLCQPISL 235 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt------a~e~l~hp~f~ 235 (454)
++.+....+.++.-.....+|..++ ..+..++ +..|++||++|.. .+++..|+||.
T Consensus 459 ~d~ntedylfqvilekqiriprsls-------------vkas~vl-----kgflnkdp~erlgc~~~~g~~dik~h~ffr 520 (593)
T KOG0695|consen 459 PDMNTEDYLFQVILEKQIRIPRSLS-------------VKASHVL-----KGFLNKDPKERLGCRPQTGFSDIKSHAFFR 520 (593)
T ss_pred cccchhHHHHHHHhhhcccccceee-------------hhhHHHH-----HHhhcCCcHHhcCCCcccchhhhhcchhhh
Confidence 3344455554444455666666542 4455677 9999999999975 57888999997
Q ss_pred cCCCCCCCccCccccccCCCCCCCC
Q psy7309 236 EGSSSGLSVLGSEQLLTCDHIPPPL 260 (454)
Q Consensus 236 ~~~~~~~~~~~~~~ll~~~~~~~~~ 260 (454)
.++|+-+.+....||..
T Consensus 521 --------~idwd~leqk~v~ppf~ 537 (593)
T KOG0695|consen 521 --------SIDWDLLEQKQVLPPFQ 537 (593)
T ss_pred --------hCCHHHHhhcccCCCCC
Confidence 36788887877788753
No 296
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.88 E-value=3.1e-23 Score=204.20 Aligned_cols=153 Identities=23% Similarity=0.299 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 138 ~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~-----------------------~~~~ 194 (304)
T cd05101 138 DLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNI-----------------------DYYK 194 (304)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccc-----------------------cccc
Confidence 46788999999999999999999999999999999999999999999754321 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+++.|+|||++. +..|+.++ ||||+ |+++|++++ +.. |+
T Consensus 195 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~g~~---------------p~ 240 (304)
T cd05101 195 KTTNGRLPVKWMAPEALF---DRVYTHQS--DVWSF--------------GVLMWEIFTLGGS---------------PY 240 (304)
T ss_pred cccCCCCCceeeCchhhc---cCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------Cc
Confidence 122345677899999987 56788888 99999 999999765 322 23
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+.+.......+........+.. .+....+++ .+||..+|.+|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 241 PGIPVEELFKLLKEGHRMDKPAN-------------CTNELYMMM-----RDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred ccCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcccChhhCCCHHHHHH
Confidence 33333333333332222222222 125566777 9999999999999998886
No 297
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.88 E-value=3e-23 Score=198.89 Aligned_cols=149 Identities=19% Similarity=0.277 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.+++++.|++.||+|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 102 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~--------------------------- 154 (256)
T cd05082 102 DCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS--------------------------- 154 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc---------------------------
Confidence 45788999999999999999999999999999999999999999999874321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
......++..|+|||++. ...++.++ ||||+ ||++|++++ |++ |
T Consensus 155 -~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~i~~~l~~~g~~---------------p 199 (256)
T cd05082 155 -TQDTGKLPVKWTAPEALR---EKKFSTKS--DVWSF--------------GILLWEIYSFGRV---------------P 199 (256)
T ss_pred -cCCCCccceeecCHHHHc---cCCCCchh--hhHHH--------------HHHHHHHHhCCCC---------------C
Confidence 112234456799999987 56678888 99999 999999764 433 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. ..+...+++ .+||+.||++|||+.++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 200 YPRIPLKDVVPRVEKGYKMDAPDG-------------CPPVVYDVM-----KQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHhcCChhhCcCHHHHHH
Confidence 222222223333332222222221 125667788 9999999999999998864
No 298
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.88 E-value=2.6e-23 Score=204.07 Aligned_cols=182 Identities=23% Similarity=0.315 Sum_probs=114.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||+.||+|+||||+||+++.++.+||+|||++...... ..
T Consensus 116 ~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------------------------~~ 171 (302)
T cd07864 116 DHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSE------------------------ES 171 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCC------------------------cc
Confidence 468899999999999999999999999999999999999999999998755320 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
.......++..|+|||++.. ...++.++ ||||+ ||+++|+++|++.. ...+......
T Consensus 172 ~~~~~~~~~~~y~~PE~~~~--~~~~~~~~--Di~sl--------------G~~~~el~~g~~~~~~~~~~~~~~~~~~~ 233 (302)
T cd07864 172 RPYTNKVITLWYRPPELLLG--EERYGPAI--DVWSC--------------GCILGELFTKKPIFQANQELAQLELISRL 233 (302)
T ss_pred cccccceeccCccChHHhcC--CCCCCchh--HHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 12223456888999998762 23466777 99999 99999977766421 1222222121
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.+.|... .+..... .............. -.+.... ...+....+++ .+||+.||.+|||+.+++.||||
T Consensus 234 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li-----~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 234 CGSPCPA-VWPDVIK-LPYFNTMKPKKQYR-RRLREEF-SFIPTPALDLL-----DHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hCCCChh-hcccccc-cccccccccccccc-cchhhhc-CCCCHHHHHHH-----HHHccCChhhCCCHHHHhcCCCC
Confidence 1222111 0000000 00000000000000 0000000 11235667777 99999999999999999999997
No 299
>KOG0193|consensus
Probab=99.88 E-value=1.3e-23 Score=212.99 Aligned_cols=162 Identities=25% Similarity=0.327 Sum_probs=117.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 1 MGRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 1 ~~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
|.....|++||+.|+.|||.++|||||||..|||+..++.|||+|||++..-.. . ..
T Consensus 487 m~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~------w-----------------~g 543 (678)
T KOG0193|consen 487 MNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR------W-----------------SG 543 (678)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeee------e-----------------cc
Confidence 456789999999999999999999999999999999999999999999974211 0 22
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
........|...|||||++..+...+|+..+ ||||+ ||++|||++|..+...+..+.
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qS--DVYaF--------------GiV~YELltg~lPysi~~~dq------- 600 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQS--DVYAF--------------GIVWYELLTGELPYSIQNRDQ------- 600 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCccc--chhhh--------------hHHHHHHHhCcCCcCCCChhh-------
Confidence 3345556788999999999877778999999 99999 999999877654221222111
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
++..+..+.- .|... ... .....++++|+ ..||..+|++||+..++|.
T Consensus 601 --------IifmVGrG~l--~pd~s------~~~-s~~pk~mk~Ll-----~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 601 --------IIFMVGRGYL--MPDLS------KIR-SNCPKAMKRLL-----SDCWKFDREERPLFPQLLS 648 (678)
T ss_pred --------eEEEeccccc--Cccch------hhh-ccCHHHHHHHH-----HHHHhcCcccCccHHHHHH
Confidence 1222211110 11110 000 11114778888 9999999999999998875
No 300
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.88 E-value=3.4e-23 Score=201.60 Aligned_cols=154 Identities=21% Similarity=0.264 Sum_probs=111.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..... ....
T Consensus 125 ~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-----------------------~~~~ 181 (283)
T cd05090 125 DFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSA-----------------------DYYR 181 (283)
T ss_pred HHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCC-----------------------ccee
Confidence 45779999999999999999999999999999999999999999999854311 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. +..++.++ |+||+ |+++|||++ +.+ |+
T Consensus 182 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~el~~~g~~---------------p~ 227 (283)
T cd05090 182 VQPKSLLPIRWMPPEAIM---YGKFSSDS--DIWSF--------------GVVLWEIFSFGLQ---------------PY 227 (283)
T ss_pred cccCCCccceecChHHhc---cCCCCchh--hhHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 223345677899999987 56678888 99999 999999775 432 23
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.+.........+........+.. ..+...+++ .+||+.||.+||++.+++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 228 YGFSNQEVIEMVRKRQLLPCSED-------------CPPRMYSLM-----TECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcccCcccCcCHHHHHHH
Confidence 22222222333322222222222 225667788 99999999999999988764
No 301
>KOG0668|consensus
Probab=99.88 E-value=3.5e-23 Score=187.71 Aligned_cols=183 Identities=23% Similarity=0.339 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++.+++|+|.||.|+|++||+|||+||.|+++|... .++|+|.|+|-... .+
T Consensus 133 dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH--------------------------p~ 186 (338)
T KOG0668|consen 133 DIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--------------------------PG 186 (338)
T ss_pred hHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC--------------------------CC
Confidence 5788999999999999999999999999999999765 69999999998763 23
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeec-CCch-----hhHHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY-KDRP-----KTLEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~-~~~~-----~~~~~l~~~i~ 155 (454)
....-.+.+..|--||.+.. -..|+.+. |+||+ ||++..|. ..+| ...++|..+-+
T Consensus 187 ~eYnVRVASRyfKGPELLVd--y~~YDYSL--D~WS~--------------GcmlA~miFrkepFFhG~dN~DQLVkIak 248 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVD--YQMYDYSL--DMWSL--------------GCMLASMIFRKEPFFHGHDNYDQLVKIAK 248 (338)
T ss_pred ceeeeeeehhhcCCchheee--chhccccH--HHHHH--------------HHHHHHHHhccCcccCCCCCHHHHHHHHH
Confidence 44556688899999999873 57899999 99999 88888843 3333 33455544433
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCc---ccccccccccccc----ccccchhHHHHHHHHhhhcCCCCCCCCChhhh
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYRE---WRSSFEWSTVRNN----IKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN 228 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~~~----~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~ 228 (454)
.++. ......+.++.-.-++.+.. ..+...|+.+.+. ..++++.+|+ .++|.+|-.+|+||.|+
T Consensus 249 VLGt----~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDll-----dklLrYDHqeRlTakEa 319 (338)
T KOG0668|consen 249 VLGT----DELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLL-----DKLLRYDHQERLTAKEA 319 (338)
T ss_pred HhCh----HHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHH-----HHHHhhccccccchHHH
Confidence 2211 12223333333222222222 2223457665543 3458888888 99999999999999999
Q ss_pred hcCcccccCC
Q psy7309 229 LCQPISLEGS 238 (454)
Q Consensus 229 l~hp~f~~~~ 238 (454)
+.||||....
T Consensus 320 m~HpyF~~~~ 329 (338)
T KOG0668|consen 320 MAHPYFAPVR 329 (338)
T ss_pred hcCchHHHHH
Confidence 9999998543
No 302
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.88 E-value=3.6e-23 Score=198.65 Aligned_cols=155 Identities=21% Similarity=0.264 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||+|||+.|++||||||+|||++.++.+||+|||+++....... ....
T Consensus 99 ~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~---------------------~~~~ 157 (262)
T cd05058 99 DLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY---------------------YSVH 157 (262)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc---------------------eeec
Confidence 4567889999999999999999999999999999999999999999875421100 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC-chhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD-RPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~-~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||.+. ...++.++ ||||+ |+++||++++ .+ |+
T Consensus 158 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~~~~---------------~~ 203 (262)
T cd05058 158 NHTGAKLPVKWMALESLQ---TQKFTTKS--DVWSF--------------GVLLWELMTRGAP---------------PY 203 (262)
T ss_pred ccccCcCCccccChhHhc---cCccchHH--HHHHH--------------HHHHHHHHcCCCC---------------CC
Confidence 123345677899999987 56788888 99999 9999997663 32 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
...........+........+.. .++...+++ .+||..+|++|||+.|++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 204 PDVDSFDITVYLLQGRRLLQPEY-------------CPDPLYEVM-----LSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred CCCCHHHHHHHHhcCCCCCCCCc-------------CCHHHHHHH-----HHHcCCChhhCCCHHHHHH
Confidence 22222222222222222222222 124566777 9999999999999998875
No 303
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.88 E-value=4.2e-23 Score=197.84 Aligned_cols=153 Identities=21% Similarity=0.310 Sum_probs=111.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.++.... ...
T Consensus 100 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~------------------------~~~ 155 (256)
T cd05114 100 DMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLD------------------------DEY 155 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCC------------------------Cce
Confidence 45788999999999999999999999999999999999999999999875421 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ |+||+ |+++||+++ +++ |
T Consensus 156 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~s~--------------G~~l~el~~~g~~---------------p 201 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFN---FSKYSSKS--DVWSF--------------GVLMWEVFTEGKM---------------P 201 (256)
T ss_pred eccCCCCCchhhCChhhcc---cCccchhh--hhHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1122334567899999987 56788888 99999 999999766 443 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+........+..+........|.. .+....+++ .+||+.||++|||++++++
T Consensus 202 ~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~~~~li-----~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 202 FEKKSNYEVVEMISRGFRLYRPKL-------------ASMTVYEVM-----YSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCC-------------CCHHHHHHH-----HHHccCCcccCcCHHHHHH
Confidence 333333333333333322222222 124566777 9999999999999998875
No 304
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.88 E-value=3.5e-23 Score=196.11 Aligned_cols=156 Identities=31% Similarity=0.488 Sum_probs=113.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||++||++|++|+||||+||+++.++.++|+|||.+..... .
T Consensus 98 ~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~--------------------------~ 151 (253)
T cd05122 98 SQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSD--------------------------T 151 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccc--------------------------c
Confidence 46788999999999999999999999999999999999999999999875431 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. ...++.+. |+||+ |++++++++++. |+
T Consensus 152 ~~~~~~~~~~~~~~PE~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~---------------p~ 197 (253)
T cd05122 152 KARNTMVGTPYWMAPEVIN---GKPYDYKA--DIWSL--------------GITAIELAEGKP---------------PY 197 (253)
T ss_pred ccccceecCCcccCHHHHc---CCCCCccc--cHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1134457889999999987 45577777 99999 999999777653 11
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI 233 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~ 233 (454)
....................+.. . ..+....+++ .+||+.||++|||+.|+++|||
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~i-----~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 198 SELPPMKALFKIATNGPPGLRNP---E--------KWSDEFKDFL-----KKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred CCCchHHHHHHHHhcCCCCcCcc---c--------ccCHHHHHHH-----HHHccCChhhCCCHHHHhcCCC
Confidence 11111111111111111111111 0 0125566777 9999999999999999999998
No 305
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.88 E-value=2.8e-23 Score=201.64 Aligned_cols=159 Identities=28% Similarity=0.442 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++..... ..
T Consensus 101 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~-------------------------~~ 155 (277)
T cd06641 101 TQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD-------------------------TQ 155 (277)
T ss_pred HHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceeccc-------------------------ch
Confidence 45788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. +..++.++ |+||+ |+++|++++|..+ +
T Consensus 156 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Dv~sl--------------G~~l~~l~~g~~p---------------~ 201 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIK---QSAYDSKA--DIWSL--------------GITAIELAKGEPP---------------H 201 (277)
T ss_pred hhhccccCCccccChhhhc---cCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1223457888999999987 55677777 99999 9999998776542 2
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
...........+.......++.. ......+++ .+||+.||.+||++.++++||||...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 202 SELHPMKVLFLIPKNNPPTLEGN-------------YSKPLKEFV-----EACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CccchHHHHHHHhcCCCCCCCcc-------------cCHHHHHHH-----HHHccCChhhCcCHHHHHhCHHHhhh
Confidence 22221222222221222222221 125567788 99999999999999999999999864
No 306
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.88 E-value=3.9e-23 Score=198.54 Aligned_cols=153 Identities=25% Similarity=0.321 Sum_probs=111.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ..
T Consensus 102 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~------------------------~~ 157 (260)
T cd05070 102 PNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN------------------------EY 157 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc------------------------cc
Confidence 357899999999999999999999999999999999999999999999754210 01
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ |+||+ |+++|++++ +.+ |
T Consensus 158 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~~g~~---------------p 203 (260)
T cd05070 158 TARQGAKFPIKWTAPEAAL---YGRFTIKS--DVWSF--------------GILLTELVTKGRV---------------P 203 (260)
T ss_pred ccccCCCCCccccChHHHh---cCCCcchh--hhHHH--------------HHHHHHHHhcCCC---------------C
Confidence 1112234567899999987 56678888 99999 999999765 433 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. .+....+++ .+||..||.+|||++++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 204 YPGMNNREVLEQVERGYRMPCPQD-------------CPISLHELM-----LQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCc-------------CCHHHHHHH-----HHHcccCcccCcCHHHHHH
Confidence 333333333333333322222222 125667788 9999999999999997763
No 307
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.88 E-value=5.3e-23 Score=205.50 Aligned_cols=197 Identities=24% Similarity=0.273 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+|+||||+||+++.++.+||+|||++.............. .......
T Consensus 119 ~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~-----------~~~~~~~ 187 (335)
T PTZ00024 119 SQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK-----------DETMQRR 187 (335)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccccccccccc-----------ccccccc
Confidence 35788999999999999999999999999999999999999999999975432110000000 0000011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~ 156 (454)
.......+++.|+|||++.. ...++.++ |+||+ ||+++|+++|.+. ..+.+...+..
T Consensus 188 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~~l~el~tg~~p~~~~~~~~~~~~i~~~ 249 (335)
T PTZ00024 188 EEMTSKVVTLWYRAPELLMG--AEKYHFAV--DMWSV--------------GCIFAELLTGKPLFPGENEIDQLGRIFEL 249 (335)
T ss_pred ccccccccccCCCCChhccc--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 22334567899999999861 23467777 99999 9999997776542 12222222222
Q ss_pred cCCCCCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 157 ENGPSTGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 157 ~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
...|....... ......... ....+.. +.... ...+..+.++| ++||+.||++|||++|+|.||||.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~-~~~~~~~~~li-----~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 250 LGTPNEDNWPQAKKLPLYTEF-TPRKPKD-----LKTIF-PNASDDAIDLL-----QSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred hCCCchhhCcchhhccccccc-CcCCccc-----HHHhC-cCCChHHHHHH-----HHHcCCCchhccCHHHHhcCcccC
Confidence 22222211000 000000000 0000000 00000 11235566777 999999999999999999999998
Q ss_pred cCCC
Q psy7309 236 EGSS 239 (454)
Q Consensus 236 ~~~~ 239 (454)
....
T Consensus 318 ~~~~ 321 (335)
T PTZ00024 318 SDPL 321 (335)
T ss_pred CCCC
Confidence 6543
No 308
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.88 E-value=3.7e-23 Score=198.27 Aligned_cols=159 Identities=28% Similarity=0.381 Sum_probs=117.8
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..++.++.|++.||+|||+ +|++|+||||+||+++.++.++|+|||.+..... .
T Consensus 99 ~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~-------------------------~ 153 (264)
T cd06623 99 PVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLEN-------------------------T 153 (264)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceeccc-------------------------C
Confidence 3578899999999999999 9999999999999999999999999999875431 1
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
........++..|+|||.+. ...++.++ |+||+ |+++|++++|..+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~---~~~~~~~~--Dv~sl--------------G~il~~l~tg~~p~-------------- 200 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQ---GESYSYAA--DIWSL--------------GLTLLECALGKFPF-------------- 200 (264)
T ss_pred CCcccceeecccccCHhhhC---CCCCCchh--hHHHH--------------HHHHHHHHhCCCCC--------------
Confidence 11123457889999999987 55777788 99999 99999987765421
Q ss_pred CCCc---hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 161 STGS---NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 161 ~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
... ........+........+.. ..+....++| .+||..+|++|||+.|+++|||++.
T Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~li-----~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 201 -LPPGQPSFFELMQAICDGPPPSLPAE------------EFSPEFRDFI-----SACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred -ccccccCHHHHHHHHhcCCCCCCCcc------------cCCHHHHHHH-----HHHccCChhhCCCHHHHHhCHHHHh
Confidence 111 11222222222222222221 0225667888 9999999999999999999999974
No 309
>KOG1989|consensus
Probab=99.88 E-value=1.5e-23 Score=221.45 Aligned_cols=171 Identities=21% Similarity=0.263 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
.+|.+||+|+++|+++||.+. |||||||-|||||+.+|+.||||||.|+....... ...+. .
T Consensus 144 ~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~---~~~e~-------------~ 207 (738)
T KOG1989|consen 144 DEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT---SAQEV-------------N 207 (738)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc---cHHHH-------------H
Confidence 479999999999999999998 99999999999999999999999999974321000 00000 0
Q ss_pred CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeee-ecCCchhhHHHHHHHhhhcC
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAE-VYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~e-l~~~~~~~~~~l~~~i~~~~ 158 (454)
.-...-...-|+.|||||++--..+...+.|+ |||+| ||++|- ||...
T Consensus 208 ~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKs--DIWAL--------------GclLYkLCy~t~--------------- 256 (738)
T KOG1989|consen 208 YVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKS--DIWAL--------------GCLLYKLCYFTT--------------- 256 (738)
T ss_pred HHHHHHHhhCCccccChHHHhhhcCCCCcchh--HHHHH--------------HHHHHHHHHhCC---------------
Confidence 00001123459999999998766678889999 99999 999998 44333
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
||.......++ ...+.+|... ..+..+++|| +.||+.||.+||++-|++.+-+-....
T Consensus 257 -PFe~sg~laIl-----ng~Y~~P~~p-----------~ys~~l~~LI-----~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 257 -PFEESGKLAIL-----NGNYSFPPFP-----------NYSDRLKDLI-----RTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -CcCcCcceeEE-----eccccCCCCc-----------cHHHHHHHHH-----HHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 33332111111 3455555541 2347888999 999999999999999999765544444
Q ss_pred CCC
Q psy7309 239 SSG 241 (454)
Q Consensus 239 ~~~ 241 (454)
.+.
T Consensus 315 ~~~ 317 (738)
T KOG1989|consen 315 PCP 317 (738)
T ss_pred CCC
Confidence 443
No 310
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.88 E-value=4.5e-23 Score=198.65 Aligned_cols=158 Identities=26% Similarity=0.384 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.|++.||+|||++||+|+||||+||+++.++.+||+|||++....... ....
T Consensus 107 ~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~----------------------~~~~ 164 (265)
T cd06652 107 VTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC----------------------LSGT 164 (265)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccc----------------------cccc
Confidence 578899999999999999999999999999999999999999999987542100 0111
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......||..|+|||++. +..++.++ |+||+ |+++|++++|+.+. .
T Consensus 165 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~el~~g~~p~---------------~ 210 (265)
T cd06652 165 GMKSVTGTPYWMSPEVIS---GEGYGRKA--DIWSV--------------GCTVVEMLTEKPPW---------------A 210 (265)
T ss_pred ccccCCCCccccChhhhc---CCCCCcch--hHHHH--------------HHHHHHHhhCCCCC---------------C
Confidence 223456899999999987 56677788 99999 99999977765421 1
Q ss_pred CchhhhhhhhhccCC-CCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 163 GSNVQKSLQKFQKSP-PSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
............... ....|.. .+....++| .+|| .+|++|||++|+++|||+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l-~~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 211 EFEAMAAIFKIATQPTNPVLPPH-------------VSDHCRDFL-----KRIF-VEAKLRPSADELLRHTFVH 265 (265)
T ss_pred ccchHHHHHHHhcCCCCCCCchh-------------hCHHHHHHH-----HHHh-cChhhCCCHHHHhcCcccC
Confidence 111111111111111 1111211 225566777 9998 4999999999999999974
No 311
>KOG0586|consensus
Probab=99.88 E-value=6e-23 Score=209.03 Aligned_cols=159 Identities=26% Similarity=0.291 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.+|.|+++|++|||+++|+|||||.+|||++.+.++||+|||++..+. ...
T Consensus 156 ~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--------------------------~~~ 209 (596)
T KOG0586|consen 156 EARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD--------------------------YGL 209 (596)
T ss_pred hhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec--------------------------ccc
Confidence 578899999999999999999999999999999999999999999998763 345
Q ss_pred CCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
...+.+|++.|.|||++. +..| +..+ |+||+ |+++|-+..|.. ||
T Consensus 210 ~lqt~cgsppyAaPEl~~---g~~y~gpe~--D~Wsl--------------gvvly~LV~GsL---------------PF 255 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFN---GKKYDGPEV--DIWSL--------------GVVLYALVEGSL---------------PF 255 (596)
T ss_pred cccccCCCCCccChHhhc---CcccCCcce--ehhhh--------------hhhheeeeeccc---------------cc
Confidence 677789999999999998 4555 4567 99999 999998655432 44
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
.+.+....-.+.. ..+..+|-.+ +.+.+++| +++|..+|.+|++.++++.|.|.......
T Consensus 256 DG~~lk~Lr~rvl-~gk~rIp~~m-------------s~dce~lL-----rk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 256 DGQNLKELRPRVL-RGKYRIPFYM-------------SCDCEDLL-----RKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred CCcccccccchhe-eeeeccccee-------------echhHHHH-----HHhhccCccccCCHHHhhhhcccchhhhh
Confidence 4444443333333 2333444432 36778999 99999999999999999999999977664
No 312
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.88 E-value=2.8e-23 Score=201.63 Aligned_cols=155 Identities=19% Similarity=0.245 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
..+.+++.||+.||+|||++|++||||||+||+++.++ .+||+|||+++......
T Consensus 116 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~---------------------- 173 (277)
T cd05036 116 KDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRAS---------------------- 173 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCcc----------------------
Confidence 45778999999999999999999999999999998765 58999999998542110
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhc
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRE 157 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~ 157 (454)
.........++..|+|||++. +..++.++ ||||+ ||++||+++ +..
T Consensus 174 -~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~~g~~------------- 220 (277)
T cd05036 174 -YYRKGGRAMLPIKWMPPEAFL---DGIFTSKT--DVWSF--------------GVLLWEIFSLGYM------------- 220 (277)
T ss_pred -ceecCCCCCccHhhCCHHHHh---cCCcCchh--HHHHH--------------HHHHHHHHcCCCC-------------
Confidence 001112234456899999987 66788888 99999 999999764 432
Q ss_pred CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
|+...........+........|... +....+++ .+||+.||++|||+.++++|
T Consensus 221 --pf~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i-----~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 221 --PYPGRTNQEVMEFVTGGGRLDPPKGC-------------PGPVYRIM-----TDCWQHTPEDRPNFATILER 274 (277)
T ss_pred --CCCCCCHHHHHHHHHcCCcCCCCCCC-------------CHHHHHHH-----HHHcCCCcccCcCHHHHHHH
Confidence 33332223333333222222222221 25556777 99999999999999999875
No 313
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.88 E-value=4.8e-23 Score=197.75 Aligned_cols=155 Identities=27% Similarity=0.406 Sum_probs=112.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++. +.+||+|||++..... ..
T Consensus 106 ~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~-------------------------~~ 159 (260)
T cd08222 106 NQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG-------------------------SC 159 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCC-------------------------Cc
Confidence 357889999999999999999999999999999974 6799999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+. +..++.++ |+||+ |+++++++++.. |+
T Consensus 160 ~~~~~~~~~~~~~~pe~~~---~~~~~~~~--Dv~sl--------------G~~~~~l~~~~~---------------~~ 205 (260)
T cd08222 160 DLATTFTGTPYYMSPEALK---HQGYDSKS--DIWSL--------------GCILYEMCCLAH---------------AF 205 (260)
T ss_pred ccccCCCCCcCccCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1223356788999999986 56677788 99999 999999766543 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.................+..+.. .+....++| .+||..||.+||++.|+++||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 206 EGQNFLSVVLRIVEGPTPSLPET-------------YSRQLNSIM-----QSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CCccHHHHHHHHHcCCCCCCcch-------------hcHHHHHHH-----HHHhcCChhhCcCHHHHhhCCCC
Confidence 22222222222222222222222 125566777 99999999999999999999997
No 314
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.88 E-value=5e-23 Score=205.26 Aligned_cols=107 Identities=20% Similarity=0.252 Sum_probs=78.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+|||++.++.+|++|||.+.......... . ....
T Consensus 102 ~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~~~~ 163 (328)
T cd08226 102 LIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA----------------K--VVYD 163 (328)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc----------------c--cccc
Confidence 467899999999999999999999999999999999999999998765432110000 0 0000
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
......++..|+|||++... ...|+.++ ||||+ ||+++++++|.+
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Diwsl--------------G~~l~el~~g~~ 208 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQD-LYGYNVKS--DIYSV--------------GITACELATGRV 208 (328)
T ss_pred ccccccCccCccChhhhcCC-CCCCCchh--hHHHH--------------HHHHHHHHhCCC
Confidence 11112356679999998721 23467777 99999 999999776654
No 315
>KOG1006|consensus
Probab=99.88 E-value=4.8e-23 Score=190.48 Aligned_cols=164 Identities=24% Similarity=0.292 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCCCc
Q psy7309 7 LLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTSHT 85 (454)
Q Consensus 7 i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (454)
|.--++.||.||.+ ..|||||+||+|||++..|.|||||||.+..+.. ....+
T Consensus 172 ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~--------------------------SiAkT 225 (361)
T KOG1006|consen 172 ITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD--------------------------SIAKT 225 (361)
T ss_pred eeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH--------------------------HHHhh
Confidence 34445789999985 5899999999999999999999999999987753 23466
Q ss_pred CcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCCch
Q psy7309 86 GQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTGSN 165 (454)
Q Consensus 86 ~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~~~ 165 (454)
..+|...|||||-+... ..+|+-.+ |+||| |++++|+.+|..+ ..+++
T Consensus 226 ~daGCrpYmAPERi~p~-~~gyDiRS--DvWSL--------------GITL~EvAtG~fP---------------yr~w~ 273 (361)
T KOG1006|consen 226 VDAGCRPYMAPERIDPS-DKGYDIRS--DVWSL--------------GITLYEVATGNFP---------------YRKWD 273 (361)
T ss_pred hccCCccccChhccCCc-cCCcchhh--hhhhh--------------cceEeeeecCCCC---------------cchHH
Confidence 77999999999999743 34688888 99999 9999998887651 11111
Q ss_pred -hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCC
Q psy7309 166 -VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSG 241 (454)
Q Consensus 166 -~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~ 241 (454)
..+-+..+..+.++.+-.....+. .+.....+| .-||.+|-++||+..+++++||+......+
T Consensus 274 svfeql~~Vv~gdpp~l~~~~~~~~--------~s~~~~~fi-----ntCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~ 337 (361)
T KOG1006|consen 274 SVFEQLCQVVIGDPPILLFDKECVH--------YSFSMVRFI-----NTCLIKDRSDRPKYDDLKKFPFYRMYAVEG 337 (361)
T ss_pred HHHHHHHHHHcCCCCeecCcccccc--------cCHHHHHHH-----HHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence 111112222233333332211111 123344455 999999999999999999999998765543
No 316
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.88 E-value=4.1e-23 Score=207.34 Aligned_cols=182 Identities=29% Similarity=0.370 Sum_probs=117.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 118 ~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~--------------------------- 170 (343)
T cd07880 118 DRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS--------------------------- 170 (343)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc---------------------------
Confidence 46788999999999999999999999999999999999999999999874321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-----HHHHHHHhhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-----LEELKHNIRR 156 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-----~~~l~~~i~~ 156 (454)
......+++.|+|||++.. ...++.++ |+||+ |++++++++|++.. ...+...+..
T Consensus 171 -~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07880 171 -EMTGYVVTRWYRAPEVILN--WMHYTQTV--DIWSV--------------GCIMAEMLTGKPLFKGHDHLDQLMEIMKV 231 (343)
T ss_pred -CccccccCCcccCHHHHhC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 1223467889999999862 23567777 99999 99999977765421 1222222221
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccc--cccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTV--RNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+. . .. ...+.......+....+.+.+..+ .....++.+.++| .+||+.||++|||+.+++.||||
T Consensus 232 ~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~l~~dP~~R~t~~~~l~~~~~ 301 (343)
T cd07880 232 TGTPS-K-EF---VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVL-----EKMLVLDAESRITAAEALAHPYF 301 (343)
T ss_pred cCCCC-H-HH---HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHH-----HHHcCCChhhCCCHHHHhcCccH
Confidence 11110 0 00 000000000000000000000000 0012235566777 99999999999999999999999
Q ss_pred ccCCC
Q psy7309 235 LEGSS 239 (454)
Q Consensus 235 ~~~~~ 239 (454)
.....
T Consensus 302 ~~~~~ 306 (343)
T cd07880 302 EEFHD 306 (343)
T ss_pred hhhcC
Confidence 86543
No 317
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.88 E-value=4.8e-23 Score=200.84 Aligned_cols=160 Identities=28% Similarity=0.432 Sum_probs=116.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.||+|+||||+||+++.++.++|+|||++..... ..
T Consensus 116 ~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~-------------------------~~ 170 (286)
T cd06614 116 PQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK-------------------------EK 170 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc-------------------------ch
Confidence 46788999999999999999999999999999999999999999999875431 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......++..|+|||++. +..++.++ |+||+ |+++|++++|.. |+
T Consensus 171 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Dv~sl--------------Gvil~~l~~g~~---------------p~ 216 (286)
T cd06614 171 SKRNSVVGTPYWMAPEVIK---RKDYGPKV--DIWSL--------------GIMCIEMAEGEP---------------PY 216 (286)
T ss_pred hhhccccCCcccCCHhHhc---CCCCCCcc--ccHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1223346788999999987 56678888 99999 999999877653 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
...........+........+.. ........++| .+||+.+|.+|||+.++++||||..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 217 LREPPLRALFLITTKGIPPLKNP-----------EKWSPEFKDFL-----NKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred CCCCHHHHHHHHHhcCCCCCcch-----------hhCCHHHHHHH-----HHHhccChhhCcCHHHHhhChHhhc
Confidence 21111111111111111111111 00125566777 9999999999999999999999997
No 318
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.88 E-value=7.2e-23 Score=194.85 Aligned_cols=155 Identities=34% Similarity=0.479 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++..... ..
T Consensus 93 ~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~-------------------------~~ 147 (250)
T cd05123 93 ERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS-------------------------EG 147 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceeccc-------------------------CC
Confidence 46788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. +..++.+. |+||+ |+++++++.+.. |+
T Consensus 148 ~~~~~~~~~~~~~~Pe~~~---~~~~~~~~--D~~sl--------------G~~~~~l~~g~~---------------p~ 193 (250)
T cd05123 148 SRTNTFCGTPEYLAPEVLL---GKGYGKAV--DWWSL--------------GVLLYEMLTGKP---------------PF 193 (250)
T ss_pred CcccCCcCCccccChHHhC---CCCCCchh--hHHHH--------------HHHHHHHHHCCC---------------CC
Confidence 2234567889999999987 45567777 99999 999999766543 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh---hhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS---EQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta---~e~l~hp~f 234 (454)
...........+.. ....++... +....+++ ++||..||.+|||+ +++++||||
T Consensus 194 ~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~l~~~i-----~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 194 YAEDRKEIYEKILK-DPLRFPEFL-------------SPEARDLI-----SGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCHHHHHHHHhc-CCCCCCCCC-------------CHHHHHHH-----HHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 22222222222222 223333331 25667787 99999999999999 999999998
No 319
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.88 E-value=5.1e-23 Score=202.88 Aligned_cols=151 Identities=22% Similarity=0.246 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 125 ~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~--------------------------~~ 178 (303)
T cd05088 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------------------------YV 178 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccch--------------------------hh
Confidence 5788999999999999999999999999999999999999999999863211 00
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. +..++.++ ||||+ ||+++|+++ |.+ |+
T Consensus 179 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p~ 224 (303)
T cd05088 179 KKTMGRLPVRWMAIESLN---YSVYTTNS--DVWSY--------------GVLLWEIVSLGGT---------------PY 224 (303)
T ss_pred hcccCCCcccccCHHHHh---ccCCcccc--cchhh--------------hhHHHHHHhcCCC---------------Cc
Confidence 111223466799999987 56678888 99999 999999765 433 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
...........+........+.. .++...+++ .+||+.||++|||+++++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 225 CGMTCAELYEKLPQGYRLEKPLN-------------CDDEVYDLM-----RQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ccCChHHHHHHHhcCCcCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence 22222222222221111111111 225566777 99999999999999988864
No 320
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.88 E-value=7.4e-23 Score=197.76 Aligned_cols=164 Identities=23% Similarity=0.351 Sum_probs=114.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...... ...
T Consensus 108 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~-----------------------~~~ 164 (272)
T cd06629 108 QLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI-----------------------YDN 164 (272)
T ss_pred HHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc-----------------------ccc
Confidence 357788999999999999999999999999999999999999999998743210 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||++... ...++.++ |+||+ |++++++++|..+.
T Consensus 165 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~~~--Dv~sl--------------G~~l~~l~~g~~p~--------------- 212 (272)
T cd06629 165 DQNMSMQGSVFWMAPEVIHSY-SQGYSAKV--DIWSL--------------GCVVLEMFAGRRPW--------------- 212 (272)
T ss_pred cccccccCCccccCHHHhccc-cCCCCccc--hhHHH--------------HHHHHHHHhCCCCC---------------
Confidence 123345688999999998722 12467777 99999 99999977765421
Q ss_pred CCchhhhhhhh-hccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQK-FQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
........... ........++.... ...+....+++ .+||..||.+|||++|+++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li-----~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 213 SDEEAIAAMFKLGNKRSAPPIPPDVS---------MNLSPVALDFL-----NACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cCcchHHHHHHhhccccCCcCCcccc---------ccCCHHHHHHH-----HHHhcCChhhCCCHHHHhhCCCC
Confidence 11111111111 11111222222110 11236677788 99999999999999999999997
No 321
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.87 E-value=5.9e-23 Score=197.26 Aligned_cols=153 Identities=23% Similarity=0.290 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.|++||||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~------------------------~~ 158 (261)
T cd05072 103 PKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN------------------------EY 158 (261)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC------------------------ce
Confidence 456789999999999999999999999999999999999999999999754210 01
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ |+||+ |+++|++++ |.. |
T Consensus 159 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~t~g~~---------------p 204 (261)
T cd05072 159 TAREGAKFPIKWTAPEAIN---FGSFTIKS--DVWSF--------------GILLYEIVTYGKI---------------P 204 (261)
T ss_pred eccCCCccceecCCHHHhc---cCCCChhh--hhhhh--------------HHHHHHHHccCCC---------------C
Confidence 1122345677899999987 56678888 99999 999999775 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.||++|||++++.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 205 YPGMSNSDVMSALQRGYRMPRMEN-------------CPDELYDIM-----KTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHccCCcccCcCHHHHHH
Confidence 222222222222222211111111 124566777 9999999999999998763
No 322
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.87 E-value=5.9e-23 Score=203.38 Aligned_cols=153 Identities=21% Similarity=0.303 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++.+++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...... ...
T Consensus 135 ~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-----------------------~~~ 191 (314)
T cd05099 135 DLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDID-----------------------YYK 191 (314)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccc-----------------------ccc
Confidence 467889999999999999999999999999999999999999999997543110 001
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. +..++.++ ||||+ |+++||+++ +.. |+
T Consensus 192 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~~l~el~~~g~~---------------p~ 237 (314)
T cd05099 192 KTSNGRLPVKWMAPEALF---DRVYTHQS--DVWSF--------------GILMWEIFTLGGS---------------PY 237 (314)
T ss_pred ccccCCCCccccCHHHHc---cCCcCccc--hhhHH--------------HHHHHHHHhCCCC---------------CC
Confidence 111223456899999987 56788888 99999 999999665 322 23
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
...+.......+........+.. ......+++ .+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 238 PGIPVEELFKLLREGHRMDKPSN-------------CTHELYMLM-----RECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCcCHHHHHH
Confidence 33333333333332222222222 124566777 9999999999999998775
No 323
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.87 E-value=4.8e-23 Score=198.99 Aligned_cols=153 Identities=18% Similarity=0.217 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+|||++.++.+|++|||.+..... ...
T Consensus 107 ~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~------------------------~~~ 162 (266)
T cd05064 107 GQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS------------------------EAI 162 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc------------------------cch
Confidence 46789999999999999999999999999999999999999999998764211 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ ||++||++. |.. |
T Consensus 163 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~ell~~g~~---------------p 208 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQ---YHHFSSAS--DVWSF--------------GIVMWEVMSYGER---------------P 208 (266)
T ss_pred hcccCCCCceeecCHHHHh---hCCccchh--HHHHH--------------HHHHHHHhcCCCC---------------C
Confidence 1112334567899999987 67788888 99999 999999543 432 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........|... .....+++ ..||+.+|.+|||++|+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~li-----~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 209 YWDMSGQDVIKAVEDGFRLPAPRNC-------------PNLLHQLM-----LDCWQKERGERPRFSQIHS 260 (266)
T ss_pred cCcCCHHHHHHHHHCCCCCCCCCCC-------------CHHHHHHH-----HHHcCCCchhCCCHHHHHH
Confidence 3332333333333323222222221 25566787 9999999999999998764
No 324
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.87 E-value=5e-23 Score=197.71 Aligned_cols=154 Identities=23% Similarity=0.363 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||+.|++|+||||+||+++.++.+||+|||.+...... ..
T Consensus 100 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~------------------------~~ 155 (256)
T cd05113 100 SQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD------------------------EY 155 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCC------------------------ce
Confidence 467899999999999999999999999999999999999999999998744210 01
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ |+||+ |+++|++++ |.. |
T Consensus 156 ~~~~~~~~~~~y~~pe~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~~g~~---------------p 201 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLL---YSKFSSKS--DVWAF--------------GVLMWEVYSLGKM---------------P 201 (256)
T ss_pred eecCCCccChhhCCHHHHh---cCcccchh--HHHHH--------------HHHHHHHhcCCCC---------------C
Confidence 1112234567899999987 56688888 99999 999999765 432 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+...+.......+........+.. .++...+++ .+||+.||.+|||+.+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 202 YERFNNSETVEKVSQGLRLYRPHL-------------ASEKVYAIM-----YSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred cCcCCHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCCCHHHHHHh
Confidence 222222222233322222211211 125667777 99999999999999988763
No 325
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.87 E-value=4.5e-23 Score=200.67 Aligned_cols=154 Identities=17% Similarity=0.222 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+|||++.++.+||+|||++...... ...
T Consensus 122 ~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~-----------------------~~~ 178 (280)
T cd05092 122 GQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-----------------------DYY 178 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCC-----------------------cee
Confidence 457889999999999999999999999999999999999999999998743210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......+++.|+|||++. +..++.++ ||||+ ||++||+++ +.+ |
T Consensus 179 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p 224 (280)
T cd05092 179 RVGGRTMLPIRWMPPESIL---YRKFTTES--DIWSF--------------GVVLWEIFTYGKQ---------------P 224 (280)
T ss_pred ecCCCccccccccCHHHhc---cCCcCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1122334578899999987 66788888 99999 999999765 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+....................+.. .++...+++ .+||+.||.+|||+++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 225 WYQLSNTEAIECITQGRELERPRT-------------CPPEVYAIM-----QGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred CccCCHHHHHHHHHcCccCCCCCC-------------CCHHHHHHH-----HHHccCChhhCCCHHHHHH
Confidence 222222222222222222222222 125667888 9999999999999998864
No 326
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.87 E-value=6.1e-23 Score=208.74 Aligned_cols=154 Identities=26% Similarity=0.333 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.+++++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ...
T Consensus 214 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----------------------~~~ 270 (375)
T cd05104 214 EDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND-----------------------SNY 270 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc-----------------------ccc
Confidence 457899999999999999999999999999999999999999999999754321 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ ||++||+++ +.. |
T Consensus 271 ~~~~~~~~~~~y~aPE~~~---~~~~~~~s--Di~sl--------------G~~l~ellt~g~~---------------p 316 (375)
T cd05104 271 VVKGNARLPVKWMAPESIF---NCVYTFES--DVWSY--------------GILLWEIFSLGSS---------------P 316 (375)
T ss_pred cccCCCCCCcceeChhHhc---CCCCCCCC--CHHHH--------------HHHHHHHHhcCCC---------------C
Confidence 1112234567899999997 66788888 99999 999999764 332 2
Q ss_pred CCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...... ...+.+........|.. .+.+..+++ .+||+.||++|||+.|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 317 YPGMPVDSKFYKMIKEGYRMLSPEC-------------APSEMYDIM-----KSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred CCCCCchHHHHHHHHhCccCCCCCC-------------CCHHHHHHH-----HHHccCChhHCcCHHHHHH
Confidence 2221111 11111211111111211 125667888 9999999999999998875
No 327
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.87 E-value=7.6e-23 Score=201.66 Aligned_cols=176 Identities=23% Similarity=0.258 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||+++.......... ... . .......
T Consensus 101 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~-~~~------~---~~~~~~~ 170 (305)
T cd05609 101 DMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL-YEG------H---IEKDTRE 170 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc-ccc------c---cccchhh
Confidence 35678899999999999999999999999999999999999999998863211000000 000 0 0000011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. +..++.++ |+||+ |+++||+++|.. |+
T Consensus 171 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~vl~el~~g~~---------------pf 216 (305)
T cd05609 171 FLDKQVCGTPEYIAPEVIL---RQGYGKPV--DWWAM--------------GIILYEFLVGCV---------------PF 216 (305)
T ss_pred ccccCCccCccccCchhcc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1222356889999999987 56788888 99999 999999776553 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC---hhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS---SEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt---a~e~l~hp~f~~~ 237 (454)
.+............. ....|... ...+....++| ++||+.||.+||| +.++|+||||...
T Consensus 217 ~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~li-----~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 217 FGDTPEELFGQVISD-DIEWPEGD----------EALPADAQDLI-----SRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred CCCCHHHHHHHHHhc-ccCCCCcc----------ccCCHHHHHHH-----HHHhccChhhccCccCHHHHHhCccccCC
Confidence 222222222222211 11122111 11225567888 9999999999998 7899999999753
No 328
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.87 E-value=5.9e-23 Score=196.95 Aligned_cols=153 Identities=22% Similarity=0.331 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 100 ~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~------------------------~~ 155 (256)
T cd05059 100 EWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD------------------------QY 155 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccc------------------------cc
Confidence 357889999999999999999999999999999999999999999998754210 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |+++|++++ +.+ |
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~g~~---------------p 201 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFD---YSRFSSKS--DVWSF--------------GVLMWEVFSEGKM---------------P 201 (256)
T ss_pred cccCCCCCCccccCHHHhc---cCCCCchh--hHHHH--------------HHHHHHHhccCCC---------------C
Confidence 0111123356799999988 56788888 99999 999999765 333 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.+|++|||+.|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 202 YERFSNSEVVESVSAGYRLYRPKL-------------APTEVYTIM-----YSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHhcCChhhCcCHHHHHH
Confidence 222222222222222222222221 235667788 9999999999999998876
No 329
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.87 E-value=5e-23 Score=203.14 Aligned_cols=154 Identities=23% Similarity=0.308 Sum_probs=110.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++.+++.|++.||+|||++|++||||||+||+++.++.+||+|||++...... ...
T Consensus 140 ~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~-----------------------~~~ 196 (307)
T cd05098 140 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-----------------------DYY 196 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccccc-----------------------chh
Confidence 357789999999999999999999999999999999999999999998754210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......+++.|+|||++. +..++.++ |+||+ ||++|||++ +.. |
T Consensus 197 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~~l~el~~~g~~---------------p 242 (307)
T cd05098 197 KKTTNGRLPVKWMAPEALF---DRIYTHQS--DVWSF--------------GVLLWEIFTLGGS---------------P 242 (307)
T ss_pred hccccCCCccceeChHHhc---cCCCCcHH--HHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1111223457899999987 56778888 99999 999999765 332 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...+.......+........+.. .+....+++ .+||..+|.+|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 243 YPGVPVEELFKLLKEGHRMDKPSN-------------CTNELYMMM-----RDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred CCcCCHHHHHHHHHcCCCCCCCCc-------------CCHHHHHHH-----HHHcccChhhCcCHHHHHH
Confidence 223233333333332222222222 125666777 9999999999999998876
No 330
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.87 E-value=7.6e-23 Score=213.34 Aligned_cols=173 Identities=19% Similarity=0.267 Sum_probs=111.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++..... ...
T Consensus 309 ~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~------------------------~~~ 364 (507)
T PLN03224 309 NVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCT------------------------GIN 364 (507)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCcccccc------------------------CCc
Confidence 35788999999999999999999999999999999999999999999864321 001
Q ss_pred CCCcCcccccceecccccccccc-----------------ccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVK-----------------AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~-----------------~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
.......+|+.|+|||++..... ..|+.....|+||+ ||++++|+.+..
T Consensus 365 ~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSl--------------Gvil~em~~~~l 430 (507)
T PLN03224 365 FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTA--------------GVLLMQMCVPEL 430 (507)
T ss_pred cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhH--------------HHHHHHHHhCCC
Confidence 11122345899999999752110 01233222399999 999999766432
Q ss_pred hhHHH---HHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCC--
Q psy7309 145 KTLEE---LKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDP-- 219 (454)
Q Consensus 145 ~~~~~---l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP-- 219 (454)
..... ....+.. ... .......+ ......++.. ...++...+|+ .+||..+|
T Consensus 431 ~p~~~~~~f~~~~~~-----~~~-~~~~~r~~-~~~~~~~~~~-----------d~~s~~~~dLi-----~~LL~~~~~~ 487 (507)
T PLN03224 431 RPVANIRLFNTELRQ-----YDN-DLNRWRMY-KGQKYDFSLL-----------DRNKEAGWDLA-----CKLITKRDQA 487 (507)
T ss_pred CCccchhhhhhHHhh-----ccc-hHHHHHhh-cccCCCcccc-----------cccChHHHHHH-----HHHhccCCCC
Confidence 11111 1000000 000 00000111 1122222211 23457888999 99999876
Q ss_pred -CCCCChhhhhcCcccc
Q psy7309 220 -SKRPSSEQNLCQPISL 235 (454)
Q Consensus 220 -~~Rpta~e~l~hp~f~ 235 (454)
.+|+|++|+|.||||.
T Consensus 488 ~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 488 NRGRLSVGQALSHRFFL 504 (507)
T ss_pred cccCCCHHHHhCCCCcC
Confidence 7899999999999996
No 331
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.87 E-value=5.4e-23 Score=198.90 Aligned_cols=175 Identities=27% Similarity=0.329 Sum_probs=118.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++............. ..+. ..........
T Consensus 102 ~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~ 176 (280)
T cd05581 102 KCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK--GDAT---NIDSQIEKNR 176 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCC--CCCc---cccccccccc
Confidence 4688999999999999999999999999999999999999999999998653211100000 0000 0000000112
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||+.. ...++.++ |+||+ |++++++++|+. |+
T Consensus 177 ~~~~~~~~~~~~~~Pe~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~g~~---------------p~ 222 (280)
T cd05581 177 RRFASFVGTAEYVSPELLN---EKPAGKSS--DLWAL--------------GCIIYQMLTGKP---------------PF 222 (280)
T ss_pred cccccccCCccccCHHHhC---CCCCChhh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 3345567899999999987 45577777 99999 999999776554 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh----hhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS----EQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta----~e~l~hp~f 234 (454)
........+..+. .....++... ++...+++ .+||+.||.+|||+ +|+++||||
T Consensus 223 ~~~~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~li-----~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 223 RGSNEYLTFQKIL-KLEYSFPPNF-------------PPDAKDLI-----EKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCccHHHHHHHHH-hcCCCCCCcc-------------CHHHHHHH-----HHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 2211111222221 1122223221 25566787 99999999999999 999999997
No 332
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.87 E-value=5.9e-23 Score=197.39 Aligned_cols=153 Identities=26% Similarity=0.350 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++..... ...
T Consensus 102 ~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~------------------------~~~ 157 (260)
T cd05069 102 PQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIED------------------------NEY 157 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccC------------------------Ccc
Confidence 35788999999999999999999999999999999999999999999875421 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |+++|++++ |.+ |
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~---~~~~~~~~--Di~sl--------------G~~l~el~t~g~~---------------p 203 (260)
T cd05069 158 TARQGAKFPIKWTAPEAAL---YGRFTIKS--DVWSF--------------GILLTELVTKGRV---------------P 203 (260)
T ss_pred cccCCCccchhhCCHHHhc---cCCcChHH--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1112234677899999987 56678888 99999 999999775 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. ......+++ ++||..||.+|||++++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 204 YPGMVNREVLEQVERGYRMPCPQG-------------CPESLHELM-----KLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCcc-------------cCHHHHHHH-----HHHccCCcccCcCHHHHHH
Confidence 222222222222322222222222 125567788 9999999999999998764
No 333
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.87 E-value=7.7e-23 Score=196.64 Aligned_cols=155 Identities=17% Similarity=0.184 Sum_probs=112.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.|++.||+|||++|++||||||+|||++.++.+||+|||++....... ...
T Consensus 95 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----------------------~~~ 152 (257)
T cd05115 95 SNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADD----------------------SYY 152 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCc----------------------cce
Confidence 4678999999999999999999999999999999999999999999987542110 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
...+...++..|+|||++. ...++.++ ||||+ |+++||+++ +.. |
T Consensus 153 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~g~~---------------p 198 (257)
T cd05115 153 KARSAGKWPLKWYAPECIN---FRKFSSRS--DVWSY--------------GITMWEAFSYGQK---------------P 198 (257)
T ss_pred eccCCCCCCcccCCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHhcCCCC---------------C
Confidence 1122233467899999987 56678888 99999 999999654 432 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. ..++..+++ .+||..||++||++.++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 199 YKKMKGPEVMSFIEQGKRLDCPAE-------------CPPEMYALM-----KDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred cCcCCHHHHHHHHHCCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 333333333333333333333332 126677888 9999999999999998864
No 334
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.87 E-value=7.5e-23 Score=204.48 Aligned_cols=154 Identities=22% Similarity=0.304 Sum_probs=111.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..... ....
T Consensus 135 ~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-----------------------~~~~ 191 (334)
T cd05100 135 DLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNI-----------------------DYYK 191 (334)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccc-----------------------cccc
Confidence 46778999999999999999999999999999999999999999998754210 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. +..++.++ ||||+ |+++|||++ +.. |+
T Consensus 192 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p~ 237 (334)
T cd05100 192 KTTNGRLPVKWMAPEALF---DRVYTHQS--DVWSF--------------GVLLWEIFTLGGS---------------PY 237 (334)
T ss_pred cccCCCcCceEcCHHHhc---cCCcCchh--hhHHH--------------HHHHHHHHhcCCC---------------CC
Confidence 122234467899999997 66788888 99999 999999765 322 33
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.+.+..+....+........+.. ......+++ .+||+.+|.+|||+.|++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 238 PGIPVEELFKLLKEGHRMDKPAN-------------CTHELYMIM-----RECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcccChhhCcCHHHHHHH
Confidence 33333333333332222222222 124566777 99999999999999999875
No 335
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.87 E-value=9.6e-23 Score=195.91 Aligned_cols=153 Identities=22% Similarity=0.293 Sum_probs=109.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~------------------------~~ 158 (261)
T cd05068 103 PQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKED------------------------IY 158 (261)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC------------------------cc
Confidence 467899999999999999999999999999999999999999999999865310 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ |+||+ |++++|+++ ++. |
T Consensus 159 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~t~g~~---------------p 204 (261)
T cd05068 159 EAREGAKFPIKWTAPEAAL---YNRFSIKS--DVWSF--------------GILLTEIVTYGRM---------------P 204 (261)
T ss_pred cccCCCcCceeccCccccc---cCCCCchh--hHHHH--------------HHHHHHHHhcCCC---------------C
Confidence 1111223346899999987 56788888 99999 999999775 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. .+....+++ .+||+.||.+||++.++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 205 YPGMTNAEVLQQVDQGYRMPCPPG-------------CPKELYDIM-----LDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCc-------------CCHHHHHHH-----HHHhhcCcccCCCHHHHHH
Confidence 323222233333322222212211 125566777 9999999999999998764
No 336
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.87 E-value=6.8e-23 Score=198.23 Aligned_cols=151 Identities=22% Similarity=0.243 Sum_probs=107.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+|||++.++.+||+|||++..... .
T Consensus 112 ~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~--------------------------~ 165 (270)
T cd05047 112 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------------------------Y 165 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccch--------------------------h
Confidence 35688999999999999999999999999999999999999999999853211 0
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
........+..|+|||++. ...++.++ |+||+ |++++|+++ +.. |
T Consensus 166 ~~~~~~~~~~~y~apE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p 211 (270)
T cd05047 166 VKKTMGRLPVRWMAIESLN---YSVYTTNS--DVWSY--------------GVLLWEIVSLGGT---------------P 211 (270)
T ss_pred hhccCCCCccccCChHHHc---cCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 0111123356799999987 56788888 99999 999999764 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. .+....+++ .+||..||.+|||++++++
T Consensus 212 f~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 212 YCGMTCAELYEKLPQGYRLEKPLN-------------CDDEVYDLM-----RQCWREKPYERPSFAQILV 263 (270)
T ss_pred ccccCHHHHHHHHhCCCCCCCCCc-------------CCHHHHHHH-----HHHcccChhhCCCHHHHHH
Confidence 222222222222222212111211 124556777 9999999999999998875
No 337
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.87 E-value=1.1e-22 Score=196.02 Aligned_cols=153 Identities=23% Similarity=0.306 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||+.|++||||||+||+++.++.+||+|||.+...... ..
T Consensus 102 ~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~------------------------~~ 157 (262)
T cd05071 102 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN------------------------EY 157 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccc------------------------cc
Confidence 467889999999999999999999999999999999999999999999754321 01
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ |+||+ |+++|++++ +.+ |
T Consensus 158 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Dvwsl--------------G~~l~ellt~g~~---------------p 203 (262)
T cd05071 158 TARQGAKFPIKWTAPEAAL---YGRFTIKS--DVWSF--------------GILLTELTTKGRV---------------P 203 (262)
T ss_pred ccccCCcccceecCHhHhc---cCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1112335677899999987 56788888 99999 999999766 432 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. ......+++ .+||+.||++|||+.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 204 YPGMVNREVLDQVERGYRMPCPPE-------------CPESLHDLM-----CQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred CCCCChHHHHHHHhcCCCCCCccc-------------cCHHHHHHH-----HHHccCCcccCCCHHHHHH
Confidence 222222222222222211111111 124556777 9999999999999998764
No 338
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.87 E-value=9.1e-23 Score=199.58 Aligned_cols=159 Identities=16% Similarity=0.156 Sum_probs=107.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ...
T Consensus 130 ~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~-----------------------~~~ 186 (296)
T cd05051 130 STLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSS-----------------------DYY 186 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccC-----------------------cce
Confidence 357899999999999999999999999999999999999999999998754210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......+|+.|+|||++. ...++.++ ||||+ ||++||+++... ..|+
T Consensus 187 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~~l~el~~~~~-------------~~p~ 234 (296)
T cd05051 187 RVQGRAPLPIRWMAWESVL---LGKFTTKS--DVWAF--------------GVTLWEILTLCR-------------EQPY 234 (296)
T ss_pred eecCcCCCCceecCHHHhh---cCCCCccc--hhhhh--------------HHHHHHHHhcCC-------------CCCC
Confidence 1223445678999999987 56788888 99999 999999654110 0122
Q ss_pred CCchhhhhhhhhccC----CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKS----PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
........+...... ......... ...+.+..+++ .+||+.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~li-----~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 235 EHLTDQQVIENAGHFFRDDGRQIYLPRP----------PNCPKDIYELM-----LECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCcChHHHHHHHHhccccccccccCCCc----------cCCCHHHHHHH-----HHHhccChhcCCCHHHHHH
Confidence 221111111111100 000000000 11225566777 9999999999999998864
No 339
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.87 E-value=1.7e-22 Score=192.76 Aligned_cols=154 Identities=30% Similarity=0.450 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||+.|++|+||||.||+++.++.+||+|||++..... .
T Consensus 103 ~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~--------------------------~ 156 (256)
T cd08530 103 QEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKK--------------------------N 156 (256)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhcc--------------------------C
Confidence 35789999999999999999999999999999999999999999999975532 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
......|++.|+|||.+. +..++.++ |+||+ |++++++++++. |+
T Consensus 157 -~~~~~~~~~~~~~Pe~~~---~~~~~~~~--D~~sl--------------G~~~~~l~~g~~---------------p~ 201 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWK---GRPYSYKS--DIWSL--------------GCLLYEMATFAP---------------PF 201 (256)
T ss_pred -CcccccCCccccCHHHHC---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 222346788999999987 56778888 99999 999999766553 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...........+........+.. .+.+..+++ .+||..+|++|||+.|+++||+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 202 EARSMQDLRYKVQRGKYPPIPPI-------------YSQDLQNFI-----RSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred CCCCHHHHHHHHhcCCCCCCchh-------------hCHHHHHHH-----HHHcCCCcccCCCHHHHhcCCCC
Confidence 22222222222222221222211 125667788 99999999999999999999973
No 340
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.87 E-value=1.1e-22 Score=195.18 Aligned_cols=152 Identities=22% Similarity=0.271 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.||+.||+|||++||+|+||||+||+++.++.+||+|||.+...... .
T Consensus 104 ~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~-------------------------~ 158 (261)
T cd05148 104 ASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKED-------------------------V 158 (261)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCc-------------------------c
Confidence 467889999999999999999999999999999999999999999999754321 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. ...++.++ |+||+ |++++++++ ++. |
T Consensus 159 ~~~~~~~~~~~~~~PE~~~---~~~~~~~~--Diwsl--------------G~~l~~l~~~g~~---------------p 204 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAAS---HGTFSTKS--DVWSF--------------GILLYEMFTYGQV---------------P 204 (261)
T ss_pred ccccCCCCceEecCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1112344677899999987 56778888 99999 999999765 433 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+........+..+........+.. .++...+++ .+||+.||.+|||+.++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 205 YPGMNNHEVYDQITAGYRMPCPAK-------------CPQEIYKIM-----LECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCcCCHHHHHHHHHhCCcCCCCCC-------------CCHHHHHHH-----HHHcCCCchhCcCHHHHHH
Confidence 222222333333332222222221 225666777 9999999999999998764
No 341
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.87 E-value=7.1e-23 Score=200.17 Aligned_cols=154 Identities=20% Similarity=0.265 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 127 ~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~-----------------------~~~ 183 (290)
T cd05045 127 GDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE-----------------------DSY 183 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCc-----------------------cch
Confidence 356899999999999999999999999999999999999999999998754211 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ ||||+ |++++||++ |.. |
T Consensus 184 ~~~~~~~~~~~y~apE~~~---~~~~~~~~--Di~sl--------------G~~l~el~t~g~~---------------p 229 (290)
T cd05045 184 VKRSKGRIPVKWMAIESLF---DHIYTTQS--DVWSF--------------GVLLWEIVTLGGN---------------P 229 (290)
T ss_pred hcccCCCCCccccCHHHHc---cCCcchHh--HHHHH--------------HHHHHHHHhcCCC---------------C
Confidence 1122234567899999987 56688888 99999 999999765 432 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. .+....+++ .+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 230 YPGIAPERLFNLLKTGYRMERPEN-------------CSEEMYNLM-----LTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCCCCHHHHHHHHhCCCCCCCCCC-------------CCHHHHHHH-----HHHccCCcccCCCHHHHHH
Confidence 222222222222222211222221 125566777 9999999999999998874
No 342
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.87 E-value=7.5e-23 Score=199.18 Aligned_cols=166 Identities=22% Similarity=0.313 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus 107 ~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~----------------------~~~ 164 (283)
T cd05080 107 AQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH----------------------EYY 164 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcc----------------------hhh
Confidence 4678999999999999999999999999999999999999999999987543210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhH---HHHHHHhhhcC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTL---EELKHNIRREN 158 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~---~~l~~~i~~~~ 158 (454)
.......++..|+|||.+. +..++.++ ||||+ |++++||++|..+.. ..+...+.
T Consensus 165 ~~~~~~~~~~~~~~PE~~~---~~~~~~~~--Di~sl--------------G~~l~el~tg~~p~~~~~~~~~~~~~--- 222 (283)
T cd05080 165 RVREDGDSPVFWYAVECLK---ENKFSYAS--DVWSF--------------GVTLYELLTHCDSKQSPPKKFEEMIG--- 222 (283)
T ss_pred ccCCCCCCCceeeCHhHhc---ccCCCccc--ccHHH--------------HHHHHHHHhCCCCCCCCcchhhhhhc---
Confidence 1112234567799999987 56678888 99999 999999776542110 00100000
Q ss_pred CCCCC-chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 159 GPSTG-SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 159 ~p~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+..+ ..................+. .......+++ ..||+.||++|||+++++.
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~li-----~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 223 -PKQGQMTVVRLIELLERGMRLPCPK-------------NCPQEVYILM-----KNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred -ccccccchhhhhhhhhcCCCCCCCC-------------CCCHHHHHHH-----HHHhccChhhCCCHHHHHH
Confidence 0000 00001111111111111111 1225667777 9999999999999998875
No 343
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.87 E-value=9.6e-23 Score=194.74 Aligned_cols=154 Identities=19% Similarity=0.245 Sum_probs=107.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ...
T Consensus 94 ~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-----------------------~~~ 150 (252)
T cd05084 94 KELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG-----------------------VYA 150 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccc-----------------------ccc
Confidence 357889999999999999999999999999999999999999999998743210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |+++||+++ +.++
T Consensus 151 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~e~~~~~~~p--------------- 196 (252)
T cd05084 151 STGGMKQIPVKWTAPEALN---YGRYSSES--DVWSF--------------GILLWEAFSLGAVP--------------- 196 (252)
T ss_pred ccCCCCCCceeecCchhhc---CCCCChHH--HHHHH--------------HHHHHHHHhCCCCC---------------
Confidence 0011122356799999987 56678888 99999 999999764 3331
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.||++|||+.++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 197 YANLSNQQTREAIEQGVRLPCPEL-------------CPDAVYRLM-----ERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred ccccCHHHHHHHHHcCCCCCCccc-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 111111122222222222222222 225667777 9999999999999998864
No 344
>KOG1167|consensus
Probab=99.87 E-value=1.9e-22 Score=197.34 Aligned_cols=213 Identities=22% Similarity=0.283 Sum_probs=123.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-CCeEEecccchhhhhhhcCCCccc----------cccCcc--
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-DHVKIGDFGLATNILQKHAGPLAR----------ELTGYI-- 68 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~~~~~~~----------~~~~~~-- 68 (454)
.+++.+++.++.||+++|.+|||||||||.|+|.+.. +.-.|+|||+|...........+. .+....
T Consensus 132 ~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~ 211 (418)
T KOG1167|consen 132 AEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQ 211 (418)
T ss_pred HHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccc
Confidence 4788999999999999999999999999999999864 567899999998432211111111 111110
Q ss_pred -----CCCCCCCC--cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC
Q psy7309 69 -----LPPIDSTA--FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK 141 (454)
Q Consensus 69 -----~~~~~~~~--~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~ 141 (454)
.++-.-.. ............||++|+|||++.. ....++++ ||||. |+|+..+++
T Consensus 212 ~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k--~~~Qttai--Diws~--------------GVI~Lslls 273 (418)
T KOG1167|consen 212 SVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR--CPRQTTAI--DIWSA--------------GVILLSLLS 273 (418)
T ss_pred ccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh--ccCcCCcc--ceeec--------------cceeehhhc
Confidence 00100000 1122344557899999999999983 45667788 99999 999998766
Q ss_pred Cch------hhHHHHHHHhhhcCCCCCCchhhhh---hhh---hccCCCCCCCcccccccccccc-c-----------cc
Q psy7309 142 DRP------KTLEELKHNIRRENGPSTGSNVQKS---LQK---FQKSPPSVYREWRSSFEWSTVR-N-----------NI 197 (454)
Q Consensus 142 ~~~------~~~~~l~~~i~~~~~p~~~~~~~~~---~~~---~~~~~~~~~p~~~~~~~~~~~~-~-----------~~ 197 (454)
.+. .....+.++....+. ...++. ..+ +.+...+..++.. +.|+++. . ..
T Consensus 274 ~~~PFf~a~dd~~al~ei~tifG~----~~mrk~A~l~g~~~l~~ksn~~~~~e~~--~~f~s~~~~~~~~~~q~n~~~~ 347 (418)
T KOG1167|consen 274 RRYPFFKAKDDADALAEIATIFGS----AEMRKCAALPGRILLWQKSNIPTIPELR--VNFETLHIESIYKSRQPNTERE 347 (418)
T ss_pred cccccccCccccchHHHHHHHhCh----HHHHHHhhcCCceeeeccccccccHHHH--hchhccChhhcccccccceeec
Confidence 443 222223222221111 111110 000 0000011111110 1122220 0 01
Q ss_pred cccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 198 KSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 198 ~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
...+....+.++++.+||+.||.+|.||+++|+||||.+..
T Consensus 348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred cccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 11222233444555999999999999999999999999543
No 345
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.87 E-value=1.2e-22 Score=198.48 Aligned_cols=168 Identities=28% Similarity=0.414 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++..... .
T Consensus 106 ~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~---------------------------~ 158 (287)
T cd06621 106 VLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN---------------------------S 158 (287)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc---------------------------c
Confidence 4678999999999999999999999999999999999999999999864321 1
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......++..|+|||.+. +..++.++ |+||+ |+++|++++|..+....- .+
T Consensus 159 ~~~~~~~~~~y~~pE~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~p~~~~~--------~~-- 209 (287)
T cd06621 159 LAGTFTGTSFYMAPERIQ---GKPYSITS--DVWSL--------------GLTLLEVAQNRFPFPPEG--------EP-- 209 (287)
T ss_pred ccccccCCccccCHHHhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCCCCccc--------CC--
Confidence 112345788999999987 66788888 99999 999999777653211000 00
Q ss_pred CchhhhhhhhhccCCCCCCCcccc-ccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRS-SFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
.....+....+.......++.... ...| ++...+++ .+||..||.+|||+.|++.||||.....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~li-----~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 210 PLGPIELLSYIVNMPNPELKDEPGNGIKW--------SEEFKDFI-----KQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred CCChHHHHHHHhcCCchhhccCCCCCCch--------HHHHHHHH-----HHHcCCCcccCCCHHHHHhCcccccccc
Confidence 000111111111111111111110 0011 24566777 9999999999999999999999975443
No 346
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.87 E-value=1.2e-22 Score=198.22 Aligned_cols=165 Identities=25% Similarity=0.355 Sum_probs=113.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||+.|++|+||||.||+++.++.++|+|||++..... ...
T Consensus 105 ~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------------------------~~~ 160 (288)
T cd05583 105 SEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA------------------------EEE 160 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccc------------------------ccc
Confidence 35778899999999999999999999999999999999999999999875421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+... ....+.++ |+||+ |++++++++|..+.... +
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Dv~sl--------------G~il~el~tg~~p~~~~---------~-- 212 (288)
T cd05583 161 ERAYSFCGTIEYMAPEVIRGG-SGGHDKAV--DWWSL--------------GVLTFELLTGASPFTVD---------G-- 212 (288)
T ss_pred cccccccCCccccCHHHhcCC-CCCCcchh--hhHHH--------------HHHHHHHHhCCCCcccC---------c--
Confidence 112235688999999998621 12356677 99999 99999977755321000 0
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC---hhhhhcCcccccC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS---SEQNLCQPISLEG 237 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt---a~e~l~hp~f~~~ 237 (454)
...........+. ......+.. .+..+.+++ .+||+.||++||| +.++|+||||...
T Consensus 213 ~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 213 EQNSQSEISRRIL-KSKPPFPKT-------------MSAEARDFI-----QKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred ccchHHHHHHHHH-ccCCCCCcc-------------cCHHHHHHH-----HHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 0000111111111 111122222 125667888 9999999999999 5677999999754
No 347
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.87 E-value=1.3e-22 Score=194.64 Aligned_cols=155 Identities=17% Similarity=0.202 Sum_probs=109.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||.+|++|+||||+|||++.++.+||+|||+++...... ...
T Consensus 95 ~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~----------------------~~~ 152 (257)
T cd05060 95 SDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGS----------------------DYY 152 (257)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCC----------------------ccc
Confidence 4678999999999999999999999999999999999999999999988543210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ ||||+ |+++|++++ +.+ |
T Consensus 153 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~~~~~g~~---------------p 198 (257)
T cd05060 153 RATTAGRWPLKWYAPECIN---YGKFSSKS--DVWSY--------------GVTLWEAFSYGAK---------------P 198 (257)
T ss_pred ccccCccccccccCHHHhc---CCCCCccc--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1112223456899999987 56688888 99999 999999764 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.||++|||+.++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 199 YGEMKGAEVIAMLESGERLPRPEE-------------CPQEIYSIM-----LSCWKYRPEDRPTFSELES 250 (257)
T ss_pred cccCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHhcCChhhCcCHHHHHH
Confidence 222222222222222222222222 125566788 9999999999999998874
No 348
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.87 E-value=1.3e-22 Score=198.30 Aligned_cols=166 Identities=24% Similarity=0.319 Sum_probs=115.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||.|||+.|++||||||+|||++.++.+||+|||++..... ...
T Consensus 105 ~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~------------------------~~~ 160 (290)
T cd05613 105 QEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE------------------------DEV 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccc------------------------ccc
Confidence 35778889999999999999999999999999999999999999999875421 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+... ...++.++ |+||+ |+++|++++|..+... ..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Dv~sl--------------G~~l~~ll~g~~p~~~-----------~~ 212 (290)
T cd05613 161 ERAYSFCGTIEYMAPDIVRGG-DGGHDKAV--DWWSM--------------GVLMYELLTGASPFTV-----------DG 212 (290)
T ss_pred cccccccCCcccCChhhccCC-CCCCCccc--cHHHH--------------HHHHHHHhcCCCCCCc-----------CC
Confidence 122345789999999998621 23466777 99999 9999997776532100 00
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~ 236 (454)
...........+.. ....+|.. ..+...+++ .+||+.||++|| ++++++.||||..
T Consensus 213 ~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~~ll-----~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 273 (290)
T cd05613 213 EKNSQAEISRRILK-SEPPYPQE-------------MSALAKDII-----QRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273 (290)
T ss_pred ccccHHHHHHHhhc-cCCCCCcc-------------CCHHHHHHH-----HHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence 00011111112211 11122222 125566777 999999999997 8999999999986
Q ss_pred CC
Q psy7309 237 GS 238 (454)
Q Consensus 237 ~~ 238 (454)
..
T Consensus 274 ~~ 275 (290)
T cd05613 274 IN 275 (290)
T ss_pred CC
Confidence 43
No 349
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.87 E-value=8.1e-23 Score=199.19 Aligned_cols=170 Identities=22% Similarity=0.349 Sum_probs=116.2
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..++.++.|++.||.|||+ +|++||||||+||+++.++.++|+|||++.....
T Consensus 103 ~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~-------------------------- 156 (284)
T cd06620 103 EILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN-------------------------- 156 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh--------------------------
Confidence 3578899999999999997 6999999999999999999999999999864321
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
......+||..|+|||++. +..++.++ |+||+ ||+++++++|+.+........ ..+
T Consensus 157 -~~~~~~~~~~~~~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~tg~~p~~~~~~~~----~~~ 212 (284)
T cd06620 157 -SIADTFVGTSTYMSPERIQ---GGKYTVKS--DVWSL--------------GISIIELALGKFPFAFSNIDD----DGQ 212 (284)
T ss_pred -hccCccccCcccCCHHHHc---cCCCCccc--hHHHH--------------HHHHHHHHhCCCCCcccchhh----hhh
Confidence 1112357899999999987 56778888 99999 999999776554221100000 000
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
............+.......++.. .......+|+ .+||+.||.+|||++|+++|+||.+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~li-----~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 213 DDPMGILDLLQQIVQEPPPRLPSS------------DFPEDLRDFV-----DACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred hhhhHHHHHHHHHhhccCCCCCch------------hcCHHHHHHH-----HHHhcCCcccCcCHHHHhcCccccccc
Confidence 000011112222221222222211 0124556777 999999999999999999999997654
No 350
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.87 E-value=1.6e-22 Score=192.35 Aligned_cols=158 Identities=29% Similarity=0.458 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.|++|+||+|+||+++.++.+||+|||.+....... ..
T Consensus 101 ~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-----------------------~~ 157 (260)
T cd06606 101 PVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE-----------------------TG 157 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc-----------------------cc
Confidence 4678999999999999999999999999999999999999999999988553210 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......++..|+|||.+. ...++.++ |+||+ |++++++++|..+ +
T Consensus 158 ~~~~~~~~~~~y~~pE~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~p---------------~ 203 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIR---GEEYGRAA--DIWSL--------------GCTVIEMATGKPP---------------W 203 (260)
T ss_pred ccccCCCCCccccCHhhhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1234467889999999987 45577788 99999 9999997665431 1
Q ss_pred CCch-hhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSN-VQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~-~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.... .......+.. .....+|.. .+....+++ .+||+.||.+|||+.|+++||||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~i-----~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 204 SELGNPMAALYKIGSSGEPPEIPEH-------------LSEEAKDFL-----RKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CCCCchHHHHHhccccCCCcCCCcc-------------cCHHHHHHH-----HHhCcCChhhCCCHHHHhhCCCC
Confidence 1111 1111111110 111222222 136677888 99999999999999999999997
No 351
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.87 E-value=2.3e-22 Score=200.77 Aligned_cols=176 Identities=30% Similarity=0.357 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|+++||+|||++||+||||||.||+++.++.+||+|||++.... .
T Consensus 109 ~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~----------------------------~ 160 (328)
T cd07856 109 FIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD----------------------------P 160 (328)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC----------------------------C
Confidence 467889999999999999999999999999999999999999999987431 1
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh----HHHHHHHhhhcC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT----LEELKHNIRREN 158 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~----~~~l~~~i~~~~ 158 (454)
......++..|+|||.+.. ...++.++ |+||+ |++++++++|.+.. .......+....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Dv~sl--------------G~il~el~tg~~~f~~~~~~~~~~~~~~~~ 222 (328)
T cd07856 161 QMTGYVSTRYYRAPEIMLT--WQKYDVEV--DIWSA--------------GCIFAEMLEGKPLFPGKDHVNQFSIITDLL 222 (328)
T ss_pred CcCCCcccccccCceeeec--cCCcCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 1233567889999999761 25677788 99999 99999977765421 001111111111
Q ss_pred CCCCCchh--------hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 159 GPSTGSNV--------QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 159 ~p~~~~~~--------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+....... .+....+...... .++... ...+....++| .+||+.||++|||+++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~li-----~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 223 GTPPDDVINTICSENTLRFVQSLPKREPV---------PFSEKF-KNADPSAIDLL-----EKMLVFDPQKRISAAEALA 287 (328)
T ss_pred CCCCHHHHHhccchhhHHHHhhccccCCC---------cHHHHc-CCCCHHHHHHH-----HHHcCCChhhCCCHHHHhc
Confidence 11111100 0011111101110 111111 11236677888 9999999999999999999
Q ss_pred CcccccCCC
Q psy7309 231 QPISLEGSS 239 (454)
Q Consensus 231 hp~f~~~~~ 239 (454)
||||.....
T Consensus 288 ~~~~~~~~~ 296 (328)
T cd07856 288 HPYLAPYHD 296 (328)
T ss_pred CCccccccC
Confidence 999976554
No 352
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.87 E-value=2e-22 Score=194.25 Aligned_cols=155 Identities=21% Similarity=0.257 Sum_probs=110.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.|++.||+|||++||+|+||||+|||++.++.+||+|||++...... ...
T Consensus 106 ~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~-----------------------~~~ 162 (266)
T cd05033 106 GQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS-----------------------EAT 162 (266)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc-----------------------ccc
Confidence 467899999999999999999999999999999999999999999999865310 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |+++|++++ |.. |
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~---~~~~~~~~--Dv~sl--------------G~~l~~l~~~g~~---------------p 208 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIA---YRKFTSAS--DVWSF--------------GIVMWEVMSYGER---------------P 208 (266)
T ss_pred eeccCCCCCccccChhhhc---cCCCcccc--chHHH--------------HHHHHHHHccCCC---------------C
Confidence 0111234567899999987 56788888 99999 999999654 332 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+...........+........+.. .++...+++ .+||+.||++|||++|++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 209 YWDMSNQDVIKAVEDGYRLPPPMD-------------CPSALYQLM-----LDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCcCHHHHHHH
Confidence 222222222333322212212221 125566777 99999999999999988763
No 353
>KOG0608|consensus
Probab=99.87 E-value=7.8e-23 Score=207.46 Aligned_cols=184 Identities=27% Similarity=0.355 Sum_probs=118.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCcccccc----C-ccCCC------
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELT----G-YILPP------ 71 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~----~-~~~~~------ 71 (454)
-++.++.++.+|+++.|..|+|||||||+|||||.+|++||.||||++-+.=.+....-.++. + +..++
T Consensus 730 LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~ 809 (1034)
T KOG0608|consen 730 LARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADIS 809 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhcccc
Confidence 478899999999999999999999999999999999999999999997432111100000000 0 00000
Q ss_pred -----CCCCC-cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh
Q psy7309 72 -----IDSTA-FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK 145 (454)
Q Consensus 72 -----~~~~~-~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~ 145 (454)
+...+ ...........+||+.|+|||++. ..+|+..| |+||. |+|+|||+.|++.
T Consensus 810 ~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~---r~g~~q~c--dwws~--------------gvil~em~~g~~p 870 (1034)
T KOG0608|consen 810 KCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA---RTGYTQLC--DWWSV--------------GVILYEMLVGQPP 870 (1034)
T ss_pred ccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc---ccCccccc--hhhHh--------------hHHHHHHhhCCCC
Confidence 00000 000111223579999999999999 78999999 99999 9999998877764
Q ss_pred hHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-
Q psy7309 146 TLEELKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS- 224 (454)
Q Consensus 146 ~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt- 224 (454)
.+++- | +. .+..+..|.+.- .++.. ...+.++.++| .+ |..++++|..
T Consensus 871 f~~~t---------p--~~-tq~kv~nw~~~l--~~~~~-----------~~ls~e~~~li-----~k-Lc~sad~RLGk 919 (1034)
T KOG0608|consen 871 FLADT---------P--GE-TQYKVINWRNFL--HIPYQ-----------GNLSKEALDLI-----QK-LCCSADSRLGK 919 (1034)
T ss_pred ccCCC---------C--Cc-ceeeeeehhhcc--ccccc-----------cccCHHHHHHH-----HH-HhcChhhhhcc
Confidence 33211 0 00 000111111111 11111 22347777887 55 5578889985
Q ss_pred --hhhhhcCccccc
Q psy7309 225 --SEQNLCQPISLE 236 (454)
Q Consensus 225 --a~e~l~hp~f~~ 236 (454)
++|+..||||+.
T Consensus 920 ng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 920 NGADQVKAHPFFKG 933 (1034)
T ss_pred cchhhhhcCccccc
Confidence 788999999984
No 354
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.86 E-value=2.1e-22 Score=194.32 Aligned_cols=148 Identities=18% Similarity=0.272 Sum_probs=103.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC-------eEEecccchhhhhhhcCCCccccccCccCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH-------VKIGDFGLATNILQKHAGPLARELTGYILPPIDS 74 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~-------vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (454)
..+++++.||+.||+|||++||+||||||+|||++.++. +|++|||++....
T Consensus 105 ~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~--------------------- 163 (262)
T cd05077 105 PWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL--------------------- 163 (262)
T ss_pred HHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc---------------------
Confidence 357889999999999999999999999999999987664 8999999886431
Q ss_pred CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeec-CCchhhHHHHHHH
Q psy7309 75 TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY-KDRPKTLEELKHN 153 (454)
Q Consensus 75 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~-~~~~~~~~~l~~~ 153 (454)
......||..|+|||.+.. +..++.++ ||||+ ||++||++ .+..+
T Consensus 164 --------~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~~l~el~~~~~~p-------- 209 (262)
T cd05077 164 --------SRQECVERIPWIAPECVED--SKNLSIAA--DKWSF--------------GTTLWEICYNGEIP-------- 209 (262)
T ss_pred --------CcccccccccccChhhhcC--CCCCCchh--HHHHH--------------HHHHHHHHhCCCCC--------
Confidence 1123467889999998752 35677788 99999 99999964 44331
Q ss_pred hhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 154 IRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 154 i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+........ ..+.... ...... ......+++ .+||+.||.+||++.+++.+
T Consensus 210 -------~~~~~~~~~-~~~~~~~-~~~~~~-------------~~~~~~~li-----~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 210 -------LKDKTLAEK-ERFYEGQ-CMLVTP-------------SCKELADLM-----THCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -------CCCcchhHH-HHHHhcC-ccCCCC-------------ChHHHHHHH-----HHHcCCChhhCcCHHHHHHh
Confidence 111111111 1111111 111000 114456777 99999999999999988864
No 355
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.86 E-value=1.8e-22 Score=193.96 Aligned_cols=153 Identities=25% Similarity=0.345 Sum_probs=110.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.|++||||||+||+++.++.++|+|||++..... ...
T Consensus 102 ~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~------------------------~~~ 157 (260)
T cd05067 102 NKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIED------------------------NEY 157 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCC------------------------CCc
Confidence 35778999999999999999999999999999999999999999999875421 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. ...++.++ ||||+ |++++|+++ |++ |
T Consensus 158 ~~~~~~~~~~~y~~pe~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~g~~---------------p 203 (260)
T cd05067 158 TAREGAKFPIKWTAPEAIN---YGTFTIKS--DVWSF--------------GILLTEIVTYGRI---------------P 203 (260)
T ss_pred ccccCCcccccccCHHHhc---cCCcCccc--chHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1122335677899999987 56678888 99999 999999765 543 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. .+....+++ .+||+.||++|||+++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 204 YPGMTNPEVIQNLERGYRMPRPDN-------------CPEELYELM-----RLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CCCCChHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHccCChhhCCCHHHHHH
Confidence 333333333333332222222221 125667788 9999999999999998764
No 356
>KOG0587|consensus
Probab=99.86 E-value=3.4e-22 Score=209.83 Aligned_cols=165 Identities=29% Similarity=0.466 Sum_probs=130.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.+-.|++.++.||.|||.+.+||||+|-.|||++.++.|||+|||.+.+++ +..
T Consensus 123 ~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld-------------------------sT~ 177 (953)
T KOG0587|consen 123 EWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD-------------------------STV 177 (953)
T ss_pred HHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee-------------------------ccc
Confidence 3467899999999999999999999999999999999999999999998765 334
Q ss_pred CCCcCcccccceeccccccccc--cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGV--KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~--~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
....+.+|||+|||||++.... ...|+..+ |+||| |++.-||-.|.|
T Consensus 178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R~--D~WsL--------------GITaIEladG~P--------------- 226 (953)
T KOG0587|consen 178 GRRNTFIGTPYWMAPEVIACDESPDATYDYRS--DLWSL--------------GITAIEMAEGAP--------------- 226 (953)
T ss_pred ccccCcCCCcccccceeeecccCCCCCccccc--chhhc--------------cceeehhcCCCC---------------
Confidence 5677889999999999997433 33455556 99999 999999866554
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
|..+......+..+...+++.+..+ -.|+ ....+|| ..||.+|-.+||+..++|.|||..+..
T Consensus 227 Pl~DmHPmraLF~IpRNPPPkLkrp---~kWs--------~~FndFI-----s~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 227 PLCDMHPMRALFLIPRNPPPKLKRP---KKWS--------KKFNDFI-----STCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred CccCcchhhhhccCCCCCCccccch---hhHH--------HHHHHHH-----HHHHhhccccCcchhhhccCCcccccc
Confidence 4444444555555555665555433 2353 4455666 999999999999999999999998544
No 357
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.86 E-value=1.9e-22 Score=192.99 Aligned_cols=153 Identities=24% Similarity=0.349 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++..... ...
T Consensus 100 ~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~------------------------~~~ 155 (256)
T cd05112 100 ETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLD------------------------DQY 155 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeeccc------------------------Ccc
Confidence 45788999999999999999999999999999999999999999999874421 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |+++||+++ +.+ |
T Consensus 156 ~~~~~~~~~~~~~aPe~~~---~~~~~~~~--Dv~sl--------------G~~l~el~~~g~~---------------p 201 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFS---FSKYSSKS--DVWSF--------------GVLMWEVFSEGKT---------------P 201 (256)
T ss_pred cccCCCccchhhcCHhHhc---cCCcChHH--HHHHH--------------HHHHHHHHcCCCC---------------C
Confidence 1122334567899999987 56688888 99999 999999765 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.+|++|||+.++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~-----~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 202 YENRSNSEVVETINAGFRLYKPRL-------------ASQSVYELM-----QHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred CCcCCHHHHHHHHhCCCCCCCCCC-------------CCHHHHHHH-----HHHcccChhhCCCHHHHHH
Confidence 222222222332222211111211 125566777 9999999999999998876
No 358
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.86 E-value=2.8e-22 Score=193.12 Aligned_cols=158 Identities=25% Similarity=0.376 Sum_probs=114.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....... ...
T Consensus 106 ~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----------------------~~~ 163 (264)
T cd06653 106 NVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC----------------------MSG 163 (264)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc----------------------ccC
Confidence 3578899999999999999999999999999999999999999999987542100 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
...+...|+..|+|||++. +..++.++ |+||+ |++++++++|+++ +
T Consensus 164 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~p---------------~ 209 (264)
T cd06653 164 TGIKSVTGTPYWMSPEVIS---GEGYGRKA--DVWSV--------------ACTVVEMLTEKPP---------------W 209 (264)
T ss_pred ccccccCCcccccCHhhhc---CCCCCccc--cHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1223457899999999987 56677788 99999 9999998776542 1
Q ss_pred CCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
..........+.. ......+|.. .++...+++ .+||+ +|.+|||+.+++.|||.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~p~~-------------~~~~~~~~i-----~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 210 AEYEAMAAIFKIATQPTKPMLPDG-------------VSDACRDFL-----KQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred CccCHHHHHHHHHcCCCCCCCCcc-------------cCHHHHHHH-----HHHhc-CcccCccHHHHhcCCCC
Confidence 1111111111111 1122223332 236677888 99999 57999999999999984
No 359
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.86 E-value=2.6e-22 Score=192.07 Aligned_cols=148 Identities=23% Similarity=0.297 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~---------------------------- 152 (254)
T cd05083 101 QLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM---------------------------- 152 (254)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccc----------------------------
Confidence 5678999999999999999999999999999999999999999999864321
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......+..|+|||.+. +..++.+. |+||+ |+++|++++ |++ |+
T Consensus 153 ~~~~~~~~~~y~~pe~~~---~~~~~~~~--Dv~sl--------------G~~l~el~~~g~~---------------p~ 198 (254)
T cd05083 153 GVDNSKLPVKWTAPEALK---HKKFSSKS--DVWSY--------------GVLLWEVFSYGRA---------------PY 198 (254)
T ss_pred cCCCCCCCceecCHHHhc---cCCcCchh--hHHHH--------------HHHHHHHHhCCCC---------------CC
Confidence 111223456799999987 56788888 99999 999999764 443 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
...........+........+.. .+....+++ .+||+.+|.+|||+++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 199 PKMSLKEVKECVEKGYRMEPPEG-------------CPADVYVLM-----TSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred ccCCHHHHHHHHhCCCCCCCCCc-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 22222222222222222211111 125566777 9999999999999998774
No 360
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.86 E-value=2.9e-22 Score=193.53 Aligned_cols=153 Identities=19% Similarity=0.231 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++...... ..
T Consensus 107 ~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~------------------------~~ 162 (270)
T cd05056 107 ASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE------------------------SY 162 (270)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc------------------------cc
Confidence 457889999999999999999999999999999999999999999998754210 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
...+...++..|+|||.+. ...++.++ ||||+ |++++|+++ |.. |
T Consensus 163 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p 208 (270)
T cd05056 163 YKASKGKLPIKWMAPESIN---FRRFTSAS--DVWMF--------------GVCMWEILMLGVK---------------P 208 (270)
T ss_pred eecCCCCccccccChhhhc---cCCCCchh--hhHHH--------------HHHHHHHHHcCCC---------------C
Confidence 0111223456899999987 56778888 99999 999999653 432 3
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||..+|.+|||+.+++.
T Consensus 209 f~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 209 FQGVKNNDVIGRIENGERLPMPPN-------------CPPTLYSLM-----TKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 333332333333333333333322 125667787 9999999999999998775
No 361
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.86 E-value=2.2e-22 Score=196.31 Aligned_cols=153 Identities=19% Similarity=0.246 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++...... ....
T Consensus 131 ~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------------~~~~ 187 (288)
T cd05050 131 EQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA-----------------------DYYK 187 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccC-----------------------cccc
Confidence 46899999999999999999999999999999999999999999998754210 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. +..++.++ |+||+ ||++||+++ +.. |+
T Consensus 188 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~el~~~~~~---------------p~ 233 (288)
T cd05050 188 ASENDAIPIRWMPPESIF---YNRYTTES--DVWAY--------------GVVLWEIFSYGMQ---------------PY 233 (288)
T ss_pred ccCCCccChhhcCHHHHh---cCCCCchh--HHHHH--------------HHHHHHHHhCCCC---------------CC
Confidence 122234467799999987 66788888 99999 999999764 321 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+.........+........+.. .+....+++ .+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 234 YGMAHEEVIYYVRDGNVLSCPDN-------------CPLELYNLM-----RLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCCCHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcccCcccCCCHHHHHH
Confidence 22222223333322222222222 125667788 9999999999999998874
No 362
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.86 E-value=3.4e-22 Score=190.56 Aligned_cols=153 Identities=20% Similarity=0.241 Sum_probs=108.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|+|++|++||||||+||+++.++.+||+|||++...... ..
T Consensus 93 ~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~------------------------~~ 148 (250)
T cd05085 93 KQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG------------------------IY 148 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccc------------------------cc
Confidence 457889999999999999999999999999999999999999999998643210 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. ...++.++ |+||+ |+++|++++ +.. |
T Consensus 149 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~ll~~~~~~g~~---------------p 194 (250)
T cd05085 149 SSSGLKQIPIKWTAPEALN---YGRYSSES--DVWSY--------------GILLWETFSLGVC---------------P 194 (250)
T ss_pred ccCCCCCCcccccCHHHhc---cCCCCchh--HHHHH--------------HHHHHHHhcCCCC---------------C
Confidence 1111223456799999987 56678888 99999 999999765 432 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. ......+++ .+||+.+|++|||+.|+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 195 YPGMTNQQAREQVEKGYRMSCPQK-------------CPDDVYKVM-----QRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcccCcccCCCHHHHHH
Confidence 322222222223322222222221 125667788 9999999999999998875
No 363
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.86 E-value=4e-22 Score=190.88 Aligned_cols=155 Identities=23% Similarity=0.298 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++..+.... ...
T Consensus 97 ~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~----------------------~~~ 154 (257)
T cd05040 97 STLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE----------------------DHY 154 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccc----------------------cce
Confidence 4678899999999999999999999999999999999999999999998653210 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ ||||+ ||+++||++ |..+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~---~~~~~~~~--Di~sl--------------G~~l~el~t~g~~p--------------- 200 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLR---TRTFSHAS--DVWMF--------------GVTLWEMFTYGEEP--------------- 200 (257)
T ss_pred ecccCCCCCceecCHHHhc---ccCcCchh--hhHHH--------------HHHHHHHHhCCCCC---------------
Confidence 1122356778899999987 56788888 99999 999999765 4432
Q ss_pred CCCchhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+......+....+.. ......+. ..+....+++ .+||+.+|++|||+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~li-----~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 201 WAGLSGSQILKKIDKEGERLERPE-------------ACPQDIYNVM-----LQCWAHNPADRPTFAALRE 253 (257)
T ss_pred CCCCCHHHHHHHHHhcCCcCCCCc-------------cCCHHHHHHH-----HHHCCCCcccCCCHHHHHH
Confidence 111111111111111 11111111 1225566777 9999999999999998875
No 364
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.86 E-value=3.7e-22 Score=190.51 Aligned_cols=153 Identities=23% Similarity=0.303 Sum_probs=111.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++....... .
T Consensus 103 ~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------~ 158 (258)
T smart00219 103 SDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD------------------------Y 158 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc------------------------c
Confidence 4678999999999999999999999999999999999999999999987553210 0
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......+++.|+|||.+. ...++.++ |+||+ |++++++++ +.+ |
T Consensus 159 ~~~~~~~~~~~y~~Pe~~~---~~~~~~~~--Di~sl--------------G~i~~~l~~~g~~---------------p 204 (258)
T smart00219 159 YKKKGGKLPIRWMAPESLK---DGKFTSKS--DVWSF--------------GVLLWEIFTLGES---------------P 204 (258)
T ss_pred cccccCCCcccccChHHhc---cCCCCcch--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 0111223788999999986 56788888 99999 999999765 332 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+....................+.. .+....+++ .+||..||.+|||+.|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 205 YPGMSNEEVLEYLKKGYRLPKPEN-------------CPPEIYKLM-----LQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCc-------------CCHHHHHHH-----HHHCcCChhhCcCHHHHHh
Confidence 322333333333333332222222 225666777 9999999999999998875
No 365
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.86 E-value=2.6e-22 Score=194.87 Aligned_cols=154 Identities=21% Similarity=0.229 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||+++.+.... ..
T Consensus 117 ~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~-----------------------~~ 173 (280)
T cd05043 117 QQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMD-----------------------YH 173 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCc-----------------------eE
Confidence 3578899999999999999999999999999999999999999999997542110 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ |+++||+++ |++ |
T Consensus 174 ~~~~~~~~~~~y~apE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~g~~---------------p 219 (280)
T cd05043 174 CLGDNENRPVKWMALESLV---NKEYSSAS--DVWSF--------------GVLLWELMTLGQT---------------P 219 (280)
T ss_pred EeCCCCCcchhccCHHHHh---cCCCCchh--hHHHh--------------HHHHHHHhcCCCC---------------C
Confidence 0111234567899999987 56788888 99999 999999765 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .++...+++ .+||..||++|||+.|++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 220 YVEIDPFEMAAYLKDGYRLAQPIN-------------CPDELFAVM-----ACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred cCcCCHHHHHHHHHcCCCCCCCCc-------------CCHHHHHHH-----HHHcCCChhhCCCHHHHHH
Confidence 222222222222222211111111 125567788 9999999999999998874
No 366
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.86 E-value=3.1e-22 Score=190.98 Aligned_cols=154 Identities=21% Similarity=0.256 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++....... ..
T Consensus 93 ~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-----------------------~~ 149 (251)
T cd05041 93 KKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI-----------------------YT 149 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCc-----------------------ce
Confidence 3567899999999999999999999999999999999999999999987542100 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |++++++++ +.. |
T Consensus 150 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~i~~~l~t~~~~---------------p 195 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALN---YGRYTSES--DVWSY--------------GILLWETFSLGDT---------------P 195 (251)
T ss_pred eccccCcceeccCChHhhc---cCCCCcch--hHHHH--------------HHHHHHHHhccCC---------------C
Confidence 0111223466799999987 56788888 99999 999999775 332 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .+....+++ .+||+.+|.+|||+.|+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 196 YPGMSNQQTRERIESGYRMPAPQL-------------CPEEIYRLM-----LQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred CccCCHHHHHHHHhcCCCCCCCcc-------------CCHHHHHHH-----HHHhccChhhCcCHHHHHH
Confidence 222222222222222222222222 125566777 9999999999999998875
No 367
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.86 E-value=3.1e-22 Score=197.27 Aligned_cols=154 Identities=19% Similarity=0.228 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 110 ~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~-----------------------~~~~ 166 (303)
T cd05110 110 LLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD-----------------------EKEY 166 (303)
T ss_pred HHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc-----------------------cccc
Confidence 57889999999999999999999999999999999999999999999854311 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......++..|+|||++. +..++.++ ||||+ |+++||+++ ++. |+
T Consensus 167 ~~~~~~~~~~y~~PE~~~---~~~~~~~~--Diwsl--------------G~~l~el~t~g~~---------------p~ 212 (303)
T cd05110 167 NADGGKMPIKWMALECIH---YRKFTHQS--DVWSY--------------GVTIWELMTFGGK---------------PY 212 (303)
T ss_pred ccCCCccccccCCHHHhc---cCCCChHH--HHHHH--------------HHHHHHHHhCCCC---------------CC
Confidence 122345677899999987 67788888 99999 999999654 222 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.+.........+........+.. ......+++ ..||..||++|||++++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 213 DGIPTREIPDLLEKGERLPQPPI-------------CTIDVYMVM-----VKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CCCCHHHHHHHHHCCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence 22222221122221222211111 124456777 99999999999999998774
No 368
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.86 E-value=3.7e-22 Score=191.14 Aligned_cols=149 Identities=23% Similarity=0.310 Sum_probs=107.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||.+.....
T Consensus 102 ~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~--------------------------- 154 (256)
T cd05039 102 AQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ--------------------------- 154 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccc---------------------------
Confidence 46789999999999999999999999999999999999999999999875421
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
......++..|+|||.+. ...++.++ |+||+ |+++++++. |.. |
T Consensus 155 -~~~~~~~~~~~~ape~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~g~~---------------p 199 (256)
T cd05039 155 -GQDSGKLPVKWTAPEALR---EKKFSTKS--DVWSF--------------GILLWEIYSFGRV---------------P 199 (256)
T ss_pred -ccccCCCcccccCchhhc---CCcCCcHH--HHHHH--------------HHHHHHHHhcCCC---------------C
Confidence 011223456799999987 56677777 99999 999999654 332 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...+.......+........+.. .++...+++ .+||..+|.+|||+.++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 200 YPRIPLKDVVPHVEKGYRMEAPEG-------------CPPEVYKVM-----KDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCCCCHHHHHHHHhcCCCCCCccC-------------CCHHHHHHH-----HHHhccChhhCcCHHHHHH
Confidence 222222222222222212222211 226667787 9999999999999998875
No 369
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.86 E-value=4.2e-22 Score=192.05 Aligned_cols=154 Identities=24% Similarity=0.292 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-----CeEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-----HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA 76 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (454)
.++..++.|++.||+|||++|++|+||||+||+++.++ .+||+|||++.......
T Consensus 106 ~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~-------------------- 165 (269)
T cd05044 106 KELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSD-------------------- 165 (269)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccc--------------------
Confidence 45778999999999999999999999999999999877 89999999997543110
Q ss_pred cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhh
Q psy7309 77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIR 155 (454)
Q Consensus 77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~ 155 (454)
.........++..|+|||++. +..++.++ ||||+ |+++||+++ +..
T Consensus 166 ---~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~ellt~g~~----------- 212 (269)
T cd05044 166 ---YYRKEGEGLLPVRWMAPESLL---DGKFTTQS--DVWSF--------------GVLMWEILTLGQQ----------- 212 (269)
T ss_pred ---ccccCcccCCCccccCHHHHc---cCCcccch--hHHHH--------------HHHHHHHHHcCCC-----------
Confidence 001122335677899999987 56778888 99999 999999764 432
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
|+...........+........+.. .+....+++ .+||+.+|.+|||++++++
T Consensus 213 ----p~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 213 ----PYPALNNQEVLQHVTAGGRLQKPEN-------------CPDKIYQLM-----TNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ----CCcccCHHHHHHHHhcCCccCCccc-------------chHHHHHHH-----HHHcCCCcccCCCHHHHHH
Confidence 2222222222222222222222222 125566777 9999999999999998764
No 370
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.86 E-value=3.1e-22 Score=194.84 Aligned_cols=170 Identities=22% Similarity=0.290 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++....... ...
T Consensus 108 ~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~----------------------~~~ 165 (284)
T cd05081 108 RKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK----------------------EYY 165 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCC----------------------cce
Confidence 4578899999999999999999999999999999999999999999998543210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......++..|+|||++. +..++.++ ||||+ |++++|++++...................
T Consensus 166 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd05081 166 KVREPGESPIFWYAPESLT---ESKFSVAS--DVWSF--------------GVVLYELFTYSDKSCSPPAEFMRMMGNDK 226 (284)
T ss_pred eecCCCCCceEeeCHHHhc---cCCcChHH--HHHHH--------------HHHHHHHhhcCCcCCCcchhhhhhccccc
Confidence 1111223456799999987 56788888 99999 99999977643211000000000000000
Q ss_pred CCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.... .......+........+.. ......+++ .+||..+|++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 227 QGQMIVYHLIELLKNNGRLPAPPG-------------CPAEIYAIM-----KECWNNDPSQRPSFSELAL 278 (284)
T ss_pred ccccchHHHHHHHhcCCcCCCCCC-------------CCHHHHHHH-----HHHccCChhhCCCHHHHHH
Confidence 0000 0111111111111111111 125567777 9999999999999998875
No 371
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.86 E-value=3.7e-22 Score=192.80 Aligned_cols=153 Identities=20% Similarity=0.217 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 114 ~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~-----------------------~~~~ 170 (273)
T cd05074 114 TLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSG-----------------------DYYR 170 (273)
T ss_pred HHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCC-----------------------ccee
Confidence 57889999999999999999999999999999999999999999998854210 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~ 161 (454)
......+++.|++||.+. ...++.++ ||||+ ||++|++++ +.+ |+
T Consensus 171 ~~~~~~~~~~~~~pe~~~---~~~~~~~s--Di~sl--------------G~il~el~~~g~~---------------p~ 216 (273)
T cd05074 171 QGCASKLPVKWLALESLA---DNVYTTHS--DVWAF--------------GVTMWEIMTRGQT---------------PY 216 (273)
T ss_pred cCCCccCchhhcCHhHHh---cCccchhh--hhHHH--------------HHHHHHHhhCCCC---------------CC
Confidence 122334567899999987 56677777 99999 999999765 433 22
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
...........+........+.. ......+++ .+||+.+|.+|||+.+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~-----~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 217 AGVENSEIYNYLIKGNRLKQPPD-------------CLEDVYELM-----CQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 22222222222222222111111 125566777 9999999999999998875
No 372
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.86 E-value=6.8e-22 Score=190.03 Aligned_cols=153 Identities=24% Similarity=0.320 Sum_probs=108.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.|||+.|++||||||+||+++..+.+||+|||++...... ..
T Consensus 102 ~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~------------------------~~ 157 (260)
T cd05073 102 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN------------------------EY 157 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC------------------------Cc
Confidence 457889999999999999999999999999999999999999999998754210 01
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. ...++.++ |+||+ |+++|++++ |++ |
T Consensus 158 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~t~g~~---------------p 203 (260)
T cd05073 158 TAREGAKFPIKWTAPEAIN---FGSFTIKS--DVWSF--------------GILLMEIVTYGRI---------------P 203 (260)
T ss_pred ccccCCcccccccCHhHhc---cCCcCccc--cchHH--------------HHHHHHHHhcCCC---------------C
Confidence 1122234567899999987 56678888 99999 999999775 543 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. ......+++ .+||+.||++||++.+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 204 YPGMSNPEVIRALERGYRMPRPEN-------------CPEELYNIM-----MRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred CCCCCHHHHHHHHhCCCCCCCccc-------------CCHHHHHHH-----HHHcccCcccCcCHHHHHH
Confidence 222222222222222211111111 125566777 9999999999999997763
No 373
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.85 E-value=3.6e-22 Score=192.23 Aligned_cols=154 Identities=27% Similarity=0.402 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..... ...
T Consensus 107 ~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~-------------------------~~~ 161 (267)
T cd08228 107 TVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-------------------------KTT 161 (267)
T ss_pred HHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccc-------------------------hhH
Confidence 5788999999999999999999999999999999999999999999875431 011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......|++.|+|||.+. +..++.++ |+||+ |+++||+++++.+... .
T Consensus 162 ~~~~~~~~~~~~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~g~~p~~~-------------~ 209 (267)
T cd08228 162 AAHSLVGTPYYMSPERIH---ENGYNFKS--DIWSL--------------GCLLYEMAALQSPFYG-------------D 209 (267)
T ss_pred HHhcCCCCccccChhhhc---cCCCCchh--hHHHH--------------HHHHHHHhcCCCCCcc-------------c
Confidence 122356889999999987 56677777 99999 9999998765532100 0
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
..........+.....+..+. ...+....+++ .+||+.||.+|||+.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~li-----~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 210 KMNLFSLCQKIEQCDYPPLPT------------EHYSEKLRELV-----SMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred cccHHHHHHHHhcCCCCCCCh------------hhcCHHHHHHH-----HHHCCCCcccCcCHHHHHH
Confidence 001111222222111111111 11225567788 9999999999999998886
No 374
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.85 E-value=3.8e-22 Score=192.63 Aligned_cols=160 Identities=22% Similarity=0.270 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ....
T Consensus 101 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----------------------~~~~ 157 (269)
T cd05042 101 VLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE-----------------------DYYI 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccc-----------------------hhee
Confidence 46789999999999999999999999999999999999999999998643210 0001
Q ss_pred CCcCcccccceecccccccc----ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhc
Q psy7309 83 SHTGQVGTALYAAPELDSHG----VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRE 157 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~----~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~ 157 (454)
......++..|+|||++... ....++.++ ||||+ ||++||+++ +.+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~--Diwsl--------------G~~l~el~~~~~~------------- 208 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKS--NIWSL--------------GVTMWELFTAADQ------------- 208 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhh--HHHHH--------------HHHHHHHHhCCCC-------------
Confidence 11334567789999997521 123556677 99999 999999765 332
Q ss_pred CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
|+........+..........++... .. ...++...+++ ..|+ .||++|||++|+++
T Consensus 209 --p~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~-----~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 209 --PYPDLSDEQVLKQVVREQDIKLPKPQ--LD------LKYSDRWYEVM-----QFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred --CCCcCCHHHHHHHHhhccCccCCCCc--cc------ccCCHHHHHHH-----HHHh-cCcccccCHHHHHH
Confidence 22221111222222222222222211 00 11224445666 7787 59999999998874
No 375
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.85 E-value=4.4e-22 Score=195.17 Aligned_cols=158 Identities=16% Similarity=0.200 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.|++.||+|||++|++||||||+||+++.++.+||+|||++...... ....
T Consensus 130 ~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----------------------~~~~ 186 (295)
T cd05097 130 NLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSG-----------------------DYYR 186 (295)
T ss_pred HHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccC-----------------------ccee
Confidence 56789999999999999999999999999999999999999999998754210 0011
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......++..|+|||++. ...++.++ |+||+ |+++++++++.. ..|+.
T Consensus 187 ~~~~~~~~~~y~aPE~~~---~~~~~~~~--DvwSl--------------G~~l~el~~~~~-------------~~p~~ 234 (295)
T cd05097 187 IQGRAVLPIRWMAWESIL---LGKFTTAS--DVWAF--------------GVTLWEMFTLCK-------------EQPYS 234 (295)
T ss_pred ccCcCcCceeecChhhhc---cCCcCchh--hHHHH--------------HHHHHHHHHcCC-------------CCCCc
Confidence 122345578899999987 56788888 99999 999999764210 11222
Q ss_pred Cchhhhhhhhh----ccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 163 GSNVQKSLQKF----QKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 163 ~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
........... .......+.... ....+...+++ .+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~li-----~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 235 LLSDEQVIENTGEFFRNQGRQIYLSQT----------PLCPSPVFKLM-----MRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ccChHHHHHHHHHhhhhccccccCCCC----------CCCCHHHHHHH-----HHHcCCCchhCcCHHHHHH
Confidence 21111111111 101111111110 11235667888 9999999999999998864
No 376
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.85 E-value=4.6e-22 Score=199.72 Aligned_cols=155 Identities=21% Similarity=0.314 Sum_probs=108.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+.+++.|++.||+|||++||+||||||+|||++.++.+||+|||++...... ...
T Consensus 179 ~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~-----------------------~~~ 235 (343)
T cd05103 179 EDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD-----------------------PDY 235 (343)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccC-----------------------cch
Confidence 356789999999999999999999999999999999999999999998754211 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ |+++|++++ |.. |
T Consensus 236 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~g~~---------------p 281 (343)
T cd05103 236 VRKGDARLPLKWMAPETIF---DRVYTIQS--DVWSF--------------GVLLWEIFSLGAS---------------P 281 (343)
T ss_pred hhcCCCCCCcceECcHHhc---CCCCCchh--hHHHH--------------HHHHHHHHHCCCC---------------C
Confidence 1112234567899999987 56788888 99999 999999763 332 1
Q ss_pred CCCchh-hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 161 STGSNV-QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 161 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+..... ......+........|.. .++...+++ .+||+.||++|||+.|+++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-----~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 282 YPGVKIDEEFCRRLKEGTRMRAPDY-------------TTPEMYQTM-----LDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred CCCccccHHHHHHHhccCCCCCCCC-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence 111111 111112222222222222 125566777 99999999999999999875
No 377
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.85 E-value=4.9e-22 Score=190.16 Aligned_cols=148 Identities=20% Similarity=0.262 Sum_probs=103.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-------CeEEecccchhhhhhhcCCCccccccCccCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-------HVKIGDFGLATNILQKHAGPLARELTGYILPPIDS 74 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-------~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (454)
..+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||++.....
T Consensus 101 ~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------- 160 (259)
T cd05037 101 HWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-------------------- 160 (259)
T ss_pred HHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc--------------------
Confidence 35678899999999999999999999999999999887 799999999875421
Q ss_pred CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC-chhhHHHHHHH
Q psy7309 75 TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD-RPKTLEELKHN 153 (454)
Q Consensus 75 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~-~~~~~~~l~~~ 153 (454)
.....++..|+|||++... ...++.++ |+||+ |+++++++++ ..
T Consensus 161 ---------~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Di~sl--------------G~~~~~l~~~~~~--------- 205 (259)
T cd05037 161 ---------REERVERIPWIAPECIRNG-QASLTIAA--DKWSF--------------GTTLLEICSNGEE--------- 205 (259)
T ss_pred ---------ccccccCCCccChhhhcCC-CCCcchhh--HHHHH--------------HHHHHHHHhCCCC---------
Confidence 1224566789999998721 13677788 99999 9999997653 22
Q ss_pred hhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 154 IRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 154 i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
|+...........+.... ..+.. ......+++ .+||..||.+|||+.++++
T Consensus 206 ------p~~~~~~~~~~~~~~~~~--~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 206 ------PLSTLSSSEKERFYQDQH--RLPMP-------------DCAELANLI-----NQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ------CcccCCchhHHHHHhcCC--CCCCC-------------CchHHHHHH-----HHHhccChhhCCCHHHHHH
Confidence 111111111111111111 11110 114556777 9999999999999998875
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.85 E-value=8.3e-22 Score=190.54 Aligned_cols=161 Identities=21% Similarity=0.283 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++...... ....
T Consensus 100 ~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~-----------------------~~~~ 156 (268)
T cd05086 100 LLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE-----------------------DYIE 156 (268)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc-----------------------hhhh
Confidence 46789999999999999999999999999999999999999999987632110 0011
Q ss_pred CCcCcccccceeccccccccc----cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 83 SHTGQVGTALYAAPELDSHGV----KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~----~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
......|+..|+|||++.... ...++.++ ||||+ |+++||++++..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~--Diwsl--------------G~~l~el~~~~~-------------- 206 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPS--NVWAL--------------GVTLWELFENAA-------------- 206 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcc--hhHHH--------------HHHHHHHHhCCC--------------
Confidence 223457889999999975211 12345667 99999 999999764211
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.|+...........+........+... +. ...++...+++ ..|| .+|.+|||++|+++
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~l~-----~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 207 QPYSHLSDREVLNHVIKDQQVKLFKPQ--LE------LPYSERWYEVL-----QFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCCCCCHHHHHHHHHhhcccccCCCc--cC------CCCcHHHHHHH-----HHHh-hCcccCCCHHHHHH
Confidence 122222222222222212222111110 00 11225556677 8898 78999999998864
No 379
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.85 E-value=8.9e-22 Score=190.93 Aligned_cols=169 Identities=24% Similarity=0.287 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++....... ...
T Consensus 109 ~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----------------------~~~ 166 (284)
T cd05038 109 KRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK----------------------DYY 166 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCC----------------------cce
Confidence 4578899999999999999999999999999999999999999999998653110 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......++..|+|||.+. ...++.++ |+||+ |++++|++++..+.......... ..++.
T Consensus 167 ~~~~~~~~~~~~~~Pe~~~---~~~~~~~~--Di~sl--------------G~~l~el~tg~~p~~~~~~~~~~-~~~~~ 226 (284)
T cd05038 167 YVKEPGESPIFWYAPECLR---TSKFSSAS--DVWSF--------------GVTLYELFTYGDPSQSPPAEFLR-MIGIA 226 (284)
T ss_pred eccCCCCCcccccCcHHHc---cCCCCccc--chHHH--------------hhhhheeeccCCCcccccchhcc-ccccc
Confidence 1111234566799999987 56777788 99999 99999988765422111111000 01111
Q ss_pred CC-chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TG-SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.. .........+........+.. ......+++ .+||+.||.+|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 227 QGQMIVTRLLELLKEGERLPRPPS-------------CPDEVYDLM-----KLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cccccHHHHHHHHHcCCcCCCCcc-------------CCHHHHHHH-----HHHhccChhhCCCHHHHHH
Confidence 11 111112222221111111111 124556677 9999999999999998875
No 380
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.85 E-value=7.5e-22 Score=190.06 Aligned_cols=153 Identities=29% Similarity=0.449 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..... ..
T Consensus 106 ~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~-------------------------~~ 160 (267)
T cd08229 106 KTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-------------------------KT 160 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc-------------------------CC
Confidence 35788999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|+|||.+. +..++.++ |+||+ |+++|+++++..+ +
T Consensus 161 ~~~~~~~~~~~~~ape~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~p---------------~ 206 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIH---ENGYNFKS--DIWSL--------------GCLLYEMAALQSP---------------F 206 (267)
T ss_pred cccccccCCcCccCHHHhc---CCCccchh--hHHHH--------------HHHHHHHHhCCCC---------------c
Confidence 1223457899999999987 56677778 99999 9999997765432 1
Q ss_pred CCc--hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGS--NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+. ........+........+. ...++...+++ .+||+.||.+|||+.++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~li-----~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 207 YGDKMNLYSLCKKIEQCDYPPLPS------------DHYSEELRQLV-----NMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ccccchHHHHhhhhhcCCCCCCCc------------ccccHHHHHHH-----HHhcCCCcccCCCHHHHHH
Confidence 111 1111122222111111111 11235677888 9999999999999997664
No 381
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.85 E-value=7.1e-22 Score=189.80 Aligned_cols=147 Identities=18% Similarity=0.267 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC--------eEEecccchhhhhhhcCCCccccccCccCCCCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH--------VKIGDFGLATNILQKHAGPLARELTGYILPPIDS 74 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~--------vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (454)
.+..++.||+.||+|||++||+||||||+||+++.++. +|++|||++....
T Consensus 101 ~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~--------------------- 159 (258)
T cd05078 101 WKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL--------------------- 159 (258)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC---------------------
Confidence 46778999999999999999999999999999987765 6999999876431
Q ss_pred CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHh
Q psy7309 75 TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNI 154 (454)
Q Consensus 75 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i 154 (454)
......++..|+|||++.. ...++.++ ||||+ |+++|++++|...
T Consensus 160 --------~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~~l~~l~~g~~~--------- 204 (258)
T cd05078 160 --------PKEILLERIPWVPPECIEN--PQNLSLAA--DKWSF--------------GTTLWEIFSGGDK--------- 204 (258)
T ss_pred --------CchhccccCCccCchhccC--CCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------
Confidence 1123467888999999872 24567777 99999 9999998775321
Q ss_pred hhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 155 RRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 155 ~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
|+............ .....+|... .....+++ .+||+.||++|||++++++
T Consensus 205 -----~~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~li-----~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 205 -----PLSALDSQKKLQFY--EDRHQLPAPK-------------WTELANLI-----NQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred -----ChhhccHHHHHHHH--HccccCCCCC-------------cHHHHHHH-----HHHhccChhhCCCHHHHHH
Confidence 11111111111111 1112222221 14556788 9999999999999998876
No 382
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.85 E-value=4.8e-22 Score=190.72 Aligned_cols=153 Identities=25% Similarity=0.321 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
+.++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~------------------------~~ 158 (261)
T cd05034 103 PQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD------------------------EY 158 (261)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch------------------------hh
Confidence 467889999999999999999999999999999999999999999998754210 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |++++++++ |+. |
T Consensus 159 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~il~~l~t~g~~---------------p 204 (261)
T cd05034 159 TAREGAKFPIKWTAPEAAN---YGRFTIKS--DVWSF--------------GILLTEIVTYGRV---------------P 204 (261)
T ss_pred hhhhccCCCccccCHHHhc---cCCcCchh--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 0111223456899999987 56678888 99999 999999765 543 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........+.. ......+++ .+||+.||.+|||++++..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i-----~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 205 YPGMTNREVLEQVERGYRMPRPPN-------------CPEELYDLM-----LQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcccCcccCCCHHHHHH
Confidence 323223333333332222222222 125566777 9999999999999997763
No 383
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.85 E-value=4.8e-22 Score=195.95 Aligned_cols=154 Identities=25% Similarity=0.340 Sum_probs=108.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.|++.||+|||++||+|+||||+|||++.++.+||+|||++...... ...
T Consensus 141 ~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~-----------------------~~~ 197 (302)
T cd05055 141 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMND-----------------------SNY 197 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCC-----------------------Cce
Confidence 467889999999999999999999999999999999999999999998754210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ ||++||+++ |.+ |
T Consensus 198 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~el~t~g~~---------------p 243 (302)
T cd05055 198 VVKGNARLPVKWMAPESIF---NCVYTFES--DVWSY--------------GILLWEIFSLGSN---------------P 243 (302)
T ss_pred eecCCCCcccccCCHhhhc---cCCCCcHh--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 1122235678899999987 56688888 99999 999999765 433 2
Q ss_pred CCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+........+.+.. .......+.. .++...+++ .+||+.+|++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 244 YPGMPVDSKFYKLIKEGYRMAQPEH-------------APAEIYDIM-----KTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred cCCCCchHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcCCCchhCcCHHHHHH
Confidence 22222111111111 1111111111 125666777 9999999999999998875
No 384
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.85 E-value=2.8e-22 Score=181.32 Aligned_cols=152 Identities=18% Similarity=0.224 Sum_probs=106.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
++++.+++||+.||+|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 17 ~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~--------------------------- 61 (176)
T smart00750 17 EEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP--------------------------- 61 (176)
T ss_pred HHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc---------------------------
Confidence 468999999999999999998 999999999999999 999874321
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....||+.|||||++. +..|+.++ ||||+ ||++|||++++++....
T Consensus 62 ---~~~~g~~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~elltg~~p~~~~------------ 107 (176)
T smart00750 62 ---EQSRVDPYFMAPEVIQ---GQSYTEKA--DIYSL--------------GITLYEALDYELPYNEE------------ 107 (176)
T ss_pred ---ccCCCcccccChHHhc---CCCCcchh--hHHHH--------------HHHHHHHHhCCCCcccc------------
Confidence 1126899999999998 67788888 99999 99999987766422110
Q ss_pred CCchhhhhhhhhccCCCCCCCcccccccccccccccccc--chhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSN--FQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
......+..+........+.... .. ..... ...+++ .+||+.||.+|||+.|+++|+|+..
T Consensus 108 --~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~i-----~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 108 --RELSAILEILLNGMPADDPRDRS--NL-----ESVSAARSFADFM-----RVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred --chhcHHHHHHHHHhccCCccccc--cH-----HHHHhhhhHHHHH-----HHHHhcccccccCHHHHHHHHHHHH
Confidence 00011111111111111111000 00 00111 466777 9999999999999999999999764
No 385
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.85 E-value=8.2e-22 Score=193.36 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.|++.||+|||++||+||||||+|||++.++.+||+|||++..+... ....
T Consensus 131 ~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~-----------------------~~~~ 187 (296)
T cd05095 131 TLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSG-----------------------DYYR 187 (296)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCC-----------------------ccee
Confidence 58899999999999999999999999999999999999999999998754210 0001
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK 141 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~ 141 (454)
......++..|+|||+.. ...++.++ |+||+ ||++||+++
T Consensus 188 ~~~~~~~~~~~~~pe~~~---~~~~~~~~--DiwSl--------------G~~l~el~~ 227 (296)
T cd05095 188 IQGRAVLPIRWMSWESIL---LGKFTTAS--DVWAF--------------GVTLWEILT 227 (296)
T ss_pred ccCcCcCccccCCHHHHh---cCCccchh--hhhHH--------------HHHHHHHHH
Confidence 122234567899999877 56788888 99999 999999764
No 386
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.85 E-value=1.1e-21 Score=190.52 Aligned_cols=154 Identities=20% Similarity=0.238 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 109 ~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~-----------------------~~~ 165 (279)
T cd05057 109 QYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD-----------------------EKE 165 (279)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCc-----------------------ccc
Confidence 357889999999999999999999999999999999999999999999854311 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ |+||+ |++++|+++ +.. |
T Consensus 166 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~g~~---------------p 211 (279)
T cd05057 166 YHAEGGKVPIKWMALESIL---HRIYTHKS--DVWSY--------------GVTVWELMTFGAK---------------P 211 (279)
T ss_pred eecCCCcccccccCHHHhh---cCCcCchh--hHHHH--------------HHHHHHHhcCCCC---------------C
Confidence 1111223467899999987 56778888 99999 999999765 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.+.........+........|.. .+....+++ .+||..||++|||+.++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-----~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 212 YEGIPAVEIPDLLEKGERLPQPPI-------------CTIDVYMVL-----VKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CCCCCHHHHHHHHhCCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCCCHHHHHH
Confidence 223222333333332322222222 124556677 9999999999999997764
No 387
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.85 E-value=8.5e-22 Score=189.92 Aligned_cols=155 Identities=19% Similarity=0.227 Sum_probs=107.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++....... ...
T Consensus 107 ~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----------------------~~~ 164 (268)
T cd05063 107 YQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP----------------------EGT 164 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc----------------------ccc
Confidence 3578899999999999999999999999999999999999999999987542110 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
........+..|+|||++. ...++.++ |+||+ |+++||+++ |.. |
T Consensus 165 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Dv~sl--------------G~il~ell~~g~~---------------p 210 (268)
T cd05063 165 YTTSGGKIPIRWTAPEAIA---YRKFTSAS--DVWSF--------------GIVMWEVMSFGER---------------P 210 (268)
T ss_pred eeccCCCcCceecCHHHhh---cCCcChHh--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 0111223356799999987 56678888 99999 999999654 443 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. ......+++ .+||+.||++||++.++++
T Consensus 211 ~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~~~~li-----~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 211 YWDMSNHEVMKAINDGFRLPAPMD-------------CPSAVYQLM-----LQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCcCCHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCcCHHHHHH
Confidence 222222222222222211111111 125566777 9999999999999998875
No 388
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.85 E-value=1.1e-21 Score=188.48 Aligned_cols=155 Identities=30% Similarity=0.417 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++..... ..
T Consensus 106 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~-------------------------~~ 160 (267)
T cd08224 106 RTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS-------------------------KT 160 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccC-------------------------CC
Confidence 36789999999999999999999999999999999999999999999875421 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|++.|+|||.+. +..++.++ |+||+ |+++++++++..+...
T Consensus 161 ~~~~~~~~~~~y~apE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~p~~~------------- 208 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIH---ENGYNFKS--DIWSL--------------GCLLYEMAALQSPFYG------------- 208 (267)
T ss_pred cccceecCCccccCHHHhc---cCCCCchh--cHHHH--------------HHHHHHHHHCCCCccc-------------
Confidence 1223456889999999987 56788888 99999 9999997765432100
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
...+.......+........|.. ..+....++| .+||..+|++|||+.++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~i-----~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 209 DKMNLYSLCKKIEKCDYPPLPAD------------HYSEELRDLV-----SRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CCccHHHHHhhhhcCCCCCCChh------------hcCHHHHHHH-----HHHcCCCcccCCCHHHHHH
Confidence 00111112222221111112210 1225566777 9999999999999998774
No 389
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed
Probab=99.84 E-value=7.9e-21 Score=203.36 Aligned_cols=151 Identities=10% Similarity=-0.011 Sum_probs=133.4
Q ss_pred CCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCC
Q psy7309 294 VSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPH 367 (454)
Q Consensus 294 ~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~ 367 (454)
.+++.+++ |....+++.|++.++++|+++||.+|.||+|++.+++..+ .++||+|.|.+|+.++|||
T Consensus 195 ~~G~~~~~-------p~~~~~~~~l~~~~~~~~~~~Gy~ev~tP~le~~~l~~~sg~~~~~~~~my~~~d~~~~~~~LRP 267 (575)
T PRK12305 195 GPGLPVWH-------PKGAIIRREIEDYLRKEHLKRGYEFVYTPHIGKSDLWKTSGHLDNYKENMFPPMEIDEEEYYLKP 267 (575)
T ss_pred CCcceEEe-------ccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCCcccchhhcccccccCCceEEEec
Confidence 44566666 7888899999999999999999999999999999998653 2589999999999999999
Q ss_pred CCCHHHHHHHHHcCC---CCceeeEeecCccccCCCC----CCccceEEEEEEEEEcCCCCcccH--HHHHHHHHHHHHh
Q psy7309 368 DLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRVL----GFHPRELYECAFDIVTNTPGVLTM--GSLRRCLMGSFRR 438 (454)
Q Consensus 368 d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~~----~g~~rE~~Q~g~eiig~~~~~~~d--~e~~~~~~~~l~~ 438 (454)
+.|.+++|+++.+.. ..|+|+||+|+|||++.++ -+|.|||+|+|++++|.+ +..+| +|++.++.++|+.
T Consensus 268 ~~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~if~~~-~~~~~e~~e~i~l~~~~~~~ 346 (575)
T PRK12305 268 MNCPGHILIYKSRLRSYRDLPLRLAEFGTVYRYEKSGVLHGLTRVRGFTQDDAHIFCTP-DQIEDEILKVLDFVLELLKD 346 (575)
T ss_pred CCCHHHHHHHhcccCChhhCCHhhEEecccccCCCCCCCcCcccccCeEEcceEEEeCH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999886432 4799999999999998774 259999999999999987 66677 9999999999999
Q ss_pred CCCCCcEEEcCccc
Q psy7309 439 FNYGNISFAPHPRV 452 (454)
Q Consensus 439 ~~~~~~~i~i~~~~ 452 (454)
||+.++.|++|+|.
T Consensus 347 lgl~~~~i~l~~r~ 360 (575)
T PRK12305 347 FGFKDYYLELSTRE 360 (575)
T ss_pred cCCCeEEEEEeCCC
Confidence 99998999999975
No 390
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.84 E-value=1.1e-21 Score=200.96 Aligned_cols=154 Identities=24% Similarity=0.331 Sum_probs=108.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..+++++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 237 ~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~-----------------------~~~ 293 (400)
T cd05105 237 LDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHD-----------------------SNY 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccc-----------------------ccc
Confidence 357889999999999999999999999999999999999999999998754211 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||++. +..++.++ ||||+ ||++||+++ +.. |
T Consensus 294 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--DiwSl--------------Gvil~ellt~g~~---------------P 339 (400)
T cd05105 294 VSKGSTFLPVKWMAPESIF---DNLYTTLS--DVWSY--------------GILLWEIFSLGGT---------------P 339 (400)
T ss_pred cccCCcCCCcceEChhhhc---CCCCCchh--hHHHH--------------HHHHHHHHHCCCC---------------C
Confidence 1223346778899999987 56788888 99999 999999753 332 1
Q ss_pred CCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...... .....+........+.. ......+++ .+||+.||++|||+.++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 340 YPGMIVDSTFYNKIKSGYRMAKPDH-------------ATQEVYDIM-----VKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CcccchhHHHHHHHhcCCCCCCCcc-------------CCHHHHHHH-----HHHCccCHhHCcCHHHHHH
Confidence 1111111 11111111111111211 125566777 9999999999999987764
No 391
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.84 E-value=1.4e-21 Score=188.55 Aligned_cols=155 Identities=21% Similarity=0.246 Sum_probs=108.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++++++.|++.||+|||++|++||||||+|||++.++.+||+|||++....... ...
T Consensus 106 ~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~----------------------~~~ 163 (267)
T cd05066 106 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP----------------------EAA 163 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc----------------------cee
Confidence 3578899999999999999999999999999999999999999999998543210 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ |+||+ |++++|++. |..+
T Consensus 164 ~~~~~~~~~~~y~~pe~~~---~~~~~~~~--Dv~sl--------------G~~l~ell~~g~~p--------------- 209 (267)
T cd05066 164 YTTRGGKIPIRWTAPEAIA---YRKFTSAS--DVWSY--------------GIVMWEVMSYGERP--------------- 209 (267)
T ss_pred eecCCCccceeecCHhHhc---cCccCchh--hhHHH--------------HHHHHHHhcCCCCC---------------
Confidence 1112233467899999998 56788888 99999 999999553 4432
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+.. .++...+++ .+||+.+|.+|||+.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 210 YWEMSNQDVIKAIEEGYRLPAPMD-------------CPAALHQLM-----LDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred cccCCHHHHHHHHhCCCcCCCCCC-------------CCHHHHHHH-----HHHcccCchhCCCHHHHHH
Confidence 211111222222222211111111 125566788 9999999999999998864
No 392
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.84 E-value=8.8e-22 Score=215.15 Aligned_cols=172 Identities=24% Similarity=0.208 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+........... ....... .......
T Consensus 114 ~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~------l~~~~~~-s~~s~~t 186 (932)
T PRK13184 114 AFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD------IDVDERN-ICYSSMT 186 (932)
T ss_pred HHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccc------ccccccc-ccccccc
Confidence 46789999999999999999999999999999999999999999999865211000000 0000000 0001112
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
.....+||+.|+|||++. +..++.++ ||||+ ||++|||++|+.+ +.
T Consensus 187 ~~g~~vGT~~YmAPE~l~---g~~~S~kS--DIWSL--------------GVILyELLTG~~P---------------F~ 232 (932)
T PRK13184 187 IPGKIVGTPDYMAPERLL---GVPASEST--DIYAL--------------GVILYQMLTLSFP---------------YR 232 (932)
T ss_pred cCCCCCCCCCCCCHHHhc---CCCCCcHh--HHHHH--------------HHHHHHHHHCCCC---------------CC
Confidence 233468999999999987 67788888 99999 9999998776542 21
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
.......... .....|.... ++ ...++...+++ .+||+.||++|++..+.+.+
T Consensus 233 ~~~~~ki~~~----~~i~~P~~~~--p~-----~~iP~~L~~LI-----~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 233 RKKGRKISYR----DVILSPIEVA--PY-----REIPPFLSQIA-----MKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred Ccchhhhhhh----hhccChhhcc--cc-----ccCCHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence 1111111100 0000111100 00 01225566777 99999999999987766644
No 393
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.84 E-value=2.1e-21 Score=187.39 Aligned_cols=157 Identities=22% Similarity=0.243 Sum_probs=107.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++......... ...
T Consensus 106 ~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------~~~ 165 (269)
T cd05065 106 IQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD--------------------PTY 165 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccc--------------------ccc
Confidence 357889999999999999999999999999999999999999999998754321000 000
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. ...++.++ ||||+ |+++||+++ |.. |
T Consensus 166 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Dvwsl--------------G~~l~e~l~~g~~---------------p 211 (269)
T cd05065 166 TSSLGGKIPIRWTAPEAIA---YRKFTSAS--DVWSY--------------GIVMWEVMSYGER---------------P 211 (269)
T ss_pred ccccCCCcceeecCHhHhc---cCcccchh--hhhhh--------------HHHHHHHhcCCCC---------------C
Confidence 0111112256799999987 66788888 99999 999999653 332 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+... .....+++ .+||+.+|.+||++++++.
T Consensus 212 ~~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~~~~li-----~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 212 YWDMSNQDVINAIEQDYRLPPPMDC-------------PTALHQLM-----LDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCCCCHHHHHHHHHcCCcCCCcccC-------------CHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence 2222222233333222121112111 24556777 9999999999999998875
No 394
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.84 E-value=2e-21 Score=188.06 Aligned_cols=155 Identities=20% Similarity=0.258 Sum_probs=108.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||+|||++||+||||||+||+++.++.++|+|||++..... ...
T Consensus 117 ~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~------------------------~~~ 172 (275)
T cd05046 117 KQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYN------------------------SEY 172 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCc------------------------ccc
Confidence 45788999999999999999999999999999999999999999999874321 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......++..|+|||.+. +..++.++ ||||+ |+++++++. +.. |
T Consensus 173 ~~~~~~~~~~~y~~PE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~~~~~---------------p 218 (275)
T cd05046 173 YKLRNALIPLRWLAPEAVQ---EDDFSTKS--DVWSF--------------GVLMWEVFTQGEL---------------P 218 (275)
T ss_pred cccCCceeEEeecChhhhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence 2233456788899999987 55677777 99999 999999765 222 1
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+............. ......+.. ...+....+++ .+||+.||.+|||+.|++.+
T Consensus 219 ~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~l~~~i-----~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 219 FYGLSDEEVLNRLQ-AGKLELPVP-----------EGCPSRLYKLM-----TRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred ccccchHHHHHHHH-cCCcCCCCC-----------CCCCHHHHHHH-----HHHcCCCcccCCCHHHHHHH
Confidence 21111112222221 111111110 11225666777 99999999999999988763
No 395
>KOG0576|consensus
Probab=99.84 E-value=1.6e-21 Score=199.32 Aligned_cols=167 Identities=31% Similarity=0.452 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++-...++.+.||+|||++|-+|||||..|||++..|.+|++|||.+..+.. ...
T Consensus 113 qiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita-------------------------ti~ 167 (829)
T KOG0576|consen 113 QIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA-------------------------TIA 167 (829)
T ss_pred HHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh-------------------------hhh
Confidence 4667899999999999999999999999999999999999999999987753 234
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...+++||+.|||||+-.-+..+.|+..+ |||++ |++..|+- ++.+|..
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlc--diwa~--------------gitAiel~---------------eLqpplf 216 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLC--DIWAL--------------GITAIELG---------------ELQPPLF 216 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccc--ccccc--------------ccchhhhh---------------hcCCccc
Confidence 67789999999999998766688999999 99999 98888753 2333333
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS 239 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 239 (454)
+......+.-..++ .+..|.......|+ +..++|+ +.+|..+|++||||+-+|.|||.....+
T Consensus 217 dlhpmr~l~LmTkS-~~qpp~lkDk~kws--------~~fh~fv-----K~altknpKkRptaeklL~h~fvs~~l~ 279 (829)
T KOG0576|consen 217 DLHPMRALFLMTKS-GFQPPTLKDKTKWS--------EFFHNFV-----KGALTKNPKKRPTAEKLLQHPFVSQTLS 279 (829)
T ss_pred ccchHHHHHHhhcc-CCCCCcccCCccch--------HHHHHHH-----HHHhcCCCccCCChhhheeceeeccchh
Confidence 33222333322222 22222222223454 6778888 9999999999999999999999876543
No 396
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain. This domain is the core catalytic domain of tRNA synthetases of the subgroup containing glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. These enzymes belong to class II aminoacyl-tRNA synthetases (aaRS) based upon their structure and the presence of three characteristic sequence motifs in the core domain. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ and the accessory subunit of mitochondrial polymerase gamma (Pol gamma b) . Most class II tRNA synthetases are dimers, with this subgroup consisting of mostly homodimers. These enzymes attach a specific amino acid to the 3' OH group of ribose of the appropriate tRNA.
Probab=99.84 E-value=8.5e-21 Score=180.51 Aligned_cols=140 Identities=11% Similarity=0.062 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCC----CCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 313 SLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRG----GSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 313 ~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~----G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
.+++.|++.+.+.|+++||.+|.||+|++.+++..+ .+++|++.|.+ |+.++||||.|.|++|+++.+..
T Consensus 3 ~~~~~l~~~~~~~~~~~G~~ei~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LrP~~~~~i~~~~~~~~~ 82 (235)
T cd00670 3 ALWRALERFLDDRMAEYGYQEILFPFLAPTVLFFKGGHLDGYRKEMYTFEDKGRELRDTDLVLRPAACEPIYQIFSGEIL 82 (235)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEECCeEcCHHHHhhcCCcccchhhcCeeccCcccccCCeEEEecCCCHHHHHHHhccCc
Confidence 468899999999999999999999999999988543 25899999988 89999999999999999886421
Q ss_pred ---CCceeeEeecCccccCCCC---CCccceEEEEEEEEEcCCC-CcccHHHHHHHHHHHHHhCCCCCcEEEcCcccc
Q psy7309 383 ---IVSMKRYCIDRVFRERRVL---GFHPRELYECAFDIVTNTP-GVLTMGSLRRCLMGSFRRFNYGNISFAPHPRVL 453 (454)
Q Consensus 383 ---~~~~k~~y~g~vfR~~~~~---~g~~rE~~Q~g~eiig~~~-~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~~~ 453 (454)
..|+|+||+|+|||++..+ .+|.|||+|+|++++|.+. +..+++|++.++.++|+.+|+ ++.+.++++..
T Consensus 83 ~~~~lP~r~~~~g~~fR~E~~~~~gl~R~reF~q~e~~~~~~~~~~~~~~~e~~~~~~~~l~~lgl-~~~i~~~~~~~ 159 (235)
T cd00670 83 SYRALPLRLDQIGPCFRHEPSGRRGLMRVREFRQVEYVVFGEPEEAEEERREWLELAEEIARELGL-PVRVVVADDPF 159 (235)
T ss_pred cchhcCeeeeeecccccCCCCCCCCChhheeeeeceEEEEcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEccChh
Confidence 4799999999999998766 5799999999999999863 457899999999999999998 69999988753
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.84 E-value=2.3e-21 Score=182.22 Aligned_cols=157 Identities=34% Similarity=0.475 Sum_probs=114.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.||.+||+.|++|+||+|.||+++.++.++|+|||.+..... .
T Consensus 87 ~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~--------------------------~ 140 (244)
T smart00220 87 DEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDP--------------------------G 140 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecc--------------------------c
Confidence 46789999999999999999999999999999999999999999999885532 1
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......|+..|++||.+. ...++.+. |+||+ |+++++++++.. |+
T Consensus 141 ~~~~~~~~~~~~~~pE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~~~~---------------p~ 186 (244)
T smart00220 141 GLLTTFVGTPEYMAPEVLL---GKGYGKAV--DVWSL--------------GVILYELLTGKP---------------PF 186 (244)
T ss_pred cccccccCCcCCCCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence 1334567888999999987 56777777 99999 999999766542 22
Q ss_pred CC-chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 162 TG-SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
.. .........+. .......... ........+++ .+||..||++||++.++++||||
T Consensus 187 ~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~i-----~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 187 PGDDQLLELFKKIG-KPKPPFPPPE----------WKISPEAKDLI-----RKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCCCcHHHHHHHHh-ccCCCCcccc----------ccCCHHHHHHH-----HHHccCCchhccCHHHHhhCCCC
Confidence 11 11112222222 1111111110 00124556777 99999999999999999999997
No 398
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.84 E-value=3.9e-21 Score=185.66 Aligned_cols=102 Identities=27% Similarity=0.321 Sum_probs=78.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+++++.|++.||+|||+.|++||||||+||+++.++++||+|||++...... ....
T Consensus 101 ~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~-----------------------~~~~ 157 (269)
T cd05087 101 TLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE-----------------------DYYV 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc-----------------------ceee
Confidence 45688999999999999999999999999999999999999999998643210 0011
Q ss_pred CCcCcccccceecccccccccc----ccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-Cc
Q psy7309 83 SHTGQVGTALYAAPELDSHGVK----AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DR 143 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~----~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~ 143 (454)
......|+..|+|||++..... ..++.++ |+||+ |+++||+++ |.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~--Diwsl--------------G~~l~el~~~g~ 207 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKES--NVWSL--------------GVTIWELFELGS 207 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccc--hhHHH--------------HHHHHHHHhCCC
Confidence 1233567888999999862111 2356677 99999 999999763 44
No 399
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.83 E-value=3.2e-21 Score=187.31 Aligned_cols=148 Identities=18% Similarity=0.242 Sum_probs=102.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-------CeEEecccchhhhhhhcCCCccccccCccCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-------HVKIGDFGLATNILQKHAGPLARELTGYILPPIDS 74 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-------~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (454)
..+.+++.||+.||+|||++||+||||||+|||++..+ .+|++|||++....
T Consensus 117 ~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~--------------------- 175 (274)
T cd05076 117 AWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTAL--------------------- 175 (274)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccc---------------------
Confidence 35678999999999999999999999999999997654 38999999876321
Q ss_pred CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeee-cCCchhhHHHHHHH
Q psy7309 75 TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEV-YKDRPKTLEELKHN 153 (454)
Q Consensus 75 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el-~~~~~~~~~~l~~~ 153 (454)
......++..|+|||.+.. ...++.++ |+||+ |+++||+ +++..+
T Consensus 176 --------~~~~~~~~~~~~aPe~~~~--~~~~~~~~--Dv~sl--------------G~~l~el~~~g~~p-------- 221 (274)
T cd05076 176 --------SREERVERIPWIAPECVPG--GNSLSTAA--DKWSF--------------GTTLLEICFDGEVP-------- 221 (274)
T ss_pred --------cccccccCCcccCchhhcC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCC--------
Confidence 1122357788999999862 25678888 99999 9999996 444431
Q ss_pred hhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 154 IRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 154 i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
+...........+. ....+|.. ..+...+++ .+||+.+|++|||+.+++++
T Consensus 222 -------~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~li-----~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 222 -------LKERTPSEKERFYE--KKHRLPEP-------------SCKELATLI-----SQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred -------ccccChHHHHHHHH--hccCCCCC-------------CChHHHHHH-----HHHcccChhhCcCHHHHHHh
Confidence 11111111111111 11112221 114556777 99999999999999998863
No 400
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.83 E-value=8.1e-22 Score=189.93 Aligned_cols=154 Identities=30% Similarity=0.429 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.|+.||+.||.|||+++++|+||+|.||+++.++.+||+|||++...... ...
T Consensus 103 ~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~-----------------------~~~ 159 (259)
T PF07714_consen 103 QQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK-----------------------SKY 159 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS-----------------------SSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc-----------------------ccc
Confidence 357889999999999999999999999999999999999999999999754210 011
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......+...|+|||.+. ...++.++ ||||+ |++++|+++ +.. |
T Consensus 160 ~~~~~~~~~~~~~aPE~~~---~~~~~~ks--DVysf--------------G~~l~ei~~~~~~---------------p 205 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLK---DGEYTKKS--DVYSF--------------GMLLYEILTLGKF---------------P 205 (259)
T ss_dssp EESTTSESGGGGS-HHHHH---HSEESHHH--HHHHH--------------HHHHHHHHTTSSG---------------T
T ss_pred ccccccccccccccccccc---cccccccc--ccccc--------------ccccccccccccc---------------c
Confidence 1223345778899999987 56688888 99999 999999776 333 2
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+... +....+++ ..||..||.+|||++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~li-----~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 206 FSDYDNEEIIEKLKQGQRLPIPDNC-------------PKDIYSLI-----QQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp TTTSCHHHHHHHHHTTEETTSBTTS-------------BHHHHHHH-----HHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccccccccceeccch-------------hHHHHHHH-----HHHcCCChhhCcCHHHHHh
Confidence 3333333334444333333333322 25566788 9999999999999998874
No 401
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.83 E-value=3e-21 Score=197.94 Aligned_cols=154 Identities=21% Similarity=0.288 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 239 ~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~-----------------------~~~ 295 (401)
T cd05107 239 MDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD-----------------------SNY 295 (401)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccc-----------------------ccc
Confidence 357889999999999999999999999999999999999999999999754211 001
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p 160 (454)
.......+++.|+|||++. +..++.++ ||||+ |++++|+++ ++. |
T Consensus 296 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------Gvil~e~l~~g~~---------------P 341 (401)
T cd05107 296 ISKGSTFLPLKWMAPESIF---NNLYTTLS--DVWSF--------------GILLWEIFTLGGT---------------P 341 (401)
T ss_pred ccCCCcCCCCceeChHHhc---CCCCCcHh--HHHHH--------------HHHHHHHHHcCCC---------------C
Confidence 1122346788999999987 56678888 99999 999999664 332 2
Q ss_pred CCCchhhhhh-hhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSL-QKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+......... ..+........|.. .+..+.+++ .+||+.||.+||+++|++.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~p~~-------------~~~~l~~li-----~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 342 YPELPMNEQFYNAIKRGYRMAKPAH-------------ASDEIYEIM-----QKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred CCCCCchHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhHCcCHHHHHH
Confidence 2221111111 11221222222222 226677888 9999999999999998876
No 402
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.83 E-value=2.8e-21 Score=210.23 Aligned_cols=50 Identities=44% Similarity=0.737 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATN 51 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~ 51 (454)
..+++++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 104 EMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 35789999999999999999999999999999999999999999999873
No 403
>KOG0984|consensus
Probab=99.83 E-value=3.1e-21 Score=172.68 Aligned_cols=99 Identities=30% Similarity=0.489 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+-+|+..++.||.|||++ .+||||+||+|||++..|+|||||||.+..+.+ ..
T Consensus 150 lGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d--------------------------Si 203 (282)
T KOG0984|consen 150 LGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD--------------------------SI 203 (282)
T ss_pred hhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh--------------------------hh
Confidence 457899999999999976 899999999999999999999999999886543 22
Q ss_pred CCcCcccccceecccccccccc-ccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 83 SHTGQVGTALYAAPELDSHGVK-AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~-~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
..+-..|...|||||.+..+.+ ..|+-++ ||||| |++++||..++.
T Consensus 204 Akt~daGCkpYmaPEri~~e~n~~gY~vks--DvWSL--------------GItmiElA~lr~ 250 (282)
T KOG0984|consen 204 AKTMDAGCKPYMAPERINPELNQKGYSVKS--DVWSL--------------GITMIEMAILRF 250 (282)
T ss_pred HHHHhcCCCccCChhhcCcccCcccceeeh--hhhhh--------------hhhhhhhhhccc
Confidence 3444688899999999874433 3777777 99999 999999876543
No 404
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.83 E-value=3.5e-21 Score=185.71 Aligned_cols=152 Identities=28% Similarity=0.430 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
..++.++.|++.||.|||+ .|++|+||||+||+++.++.+||+|||.+.....
T Consensus 113 ~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~-------------------------- 166 (269)
T cd08528 113 ERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQP-------------------------- 166 (269)
T ss_pred HHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccc--------------------------
Confidence 3578999999999999996 7899999999999999999999999999875421
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
........|+..|+|||++. +..++.++ |+||+ |+++|+++++.++
T Consensus 167 ~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~--Dv~sl--------------G~ll~~l~~g~~p--------------- 212 (269)
T cd08528 167 ESKLTSVVGTILYSCPEIVK---NEPYGEKA--DVWAF--------------GCILYQMCTLQPP--------------- 212 (269)
T ss_pred ccccccccCcccCcChhhhc---CCCCchHH--HHHHH--------------HHHHHHHHhCCCc---------------
Confidence 11334567899999999998 56678888 99999 9999997766542
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+...........+........+. ...++...+++ .+||+.||++|||+.|+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~li-----~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYEPLPE------------GMYSEDVTDVI-----TSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred ccccCHHHHHHHHhhccCCcCCc------------ccCCHHHHHHH-----HHHCCCCCccCCCHHHHHH
Confidence 21112222222222111111111 11225667777 9999999999999998765
No 405
>cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from prokaryotes and from the mitochondria of eukaryotes.
Probab=99.82 E-value=1.7e-20 Score=180.34 Aligned_cols=151 Identities=14% Similarity=0.102 Sum_probs=127.0
Q ss_pred CCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEe
Q psy7309 291 NQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVT 364 (454)
Q Consensus 291 ~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~ 364 (454)
.+...++.+++ |....+++.|++.+.++|+++||.+|.||+|++.+++..+ .+++|.+.|.+|+.++
T Consensus 17 ~~~~~G~~~~l-------P~g~~l~~~i~~~~~~~~~~~G~~ei~~P~l~~~~~~~~sg~~~~~~~emy~~~d~~~~~l~ 89 (255)
T cd00779 17 RQTSSGLYSWL-------PLGLRVLKKIENIIREEMNKIGAQEILMPILQPAELWKESGRWDAYGPELLRLKDRHGKEFL 89 (255)
T ss_pred ccCCCceEEEC-------chHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCccccCcccEEEecCCCCeEE
Confidence 34555666666 7888899999999999999999999999999999998653 2689999999999999
Q ss_pred eCCC----CCHHHHHHHHHcCCCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCCCcccHH---HHHHHHHH
Q psy7309 365 LPHD----LRIPFARYLAQNGSIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTPGVLTMG---SLRRCLMG 434 (454)
Q Consensus 365 Lr~d----~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~~~~~d~---e~~~~~~~ 434 (454)
|||+ +|.+++|.++... ..|+|+||+|+|||++ +++.| |.|||+|++++++|.+ ...+|+ |++.++.+
T Consensus 90 LrPt~e~~~t~~~~~~i~s~~-~LPlr~~~~~~~FR~E~~~~~Gl~R~reF~q~e~~~~~~~-~~~a~~~~~~i~~~~~~ 167 (255)
T cd00779 90 LGPTHEEVITDLVANEIKSYK-QLPLNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDID-EESLEETYEKMYQAYSR 167 (255)
T ss_pred EecCCcHHHHHHHHhccccHh-hCCHHHHhCcceecCCCCCCCceeeeeeEeHhhheeccCC-HHHHHHHHHHHHHHHHH
Confidence 9999 5555555544333 5899999999999999 88899 9999999999999987 678888 78888999
Q ss_pred HHHhCCCCCcEEEcCcc
Q psy7309 435 SFRRFNYGNISFAPHPR 451 (454)
Q Consensus 435 ~l~~~~~~~~~i~i~~~ 451 (454)
+|+.||+ +|.+..+++
T Consensus 168 il~~Lgl-~~~~~~~~~ 183 (255)
T cd00779 168 IFKRLGL-PFVKVEADS 183 (255)
T ss_pred HHHHcCC-cEEEEEecC
Confidence 9999999 666666544
No 406
>KOG1187|consensus
Probab=99.81 E-value=1.7e-20 Score=188.86 Aligned_cols=100 Identities=32% Similarity=0.435 Sum_probs=83.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHcC---CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309 1 MGRAWRLLREIIEGLSHIHSQG---IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF 77 (454)
Q Consensus 1 ~~~i~~i~~qil~gL~~LH~~g---iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (454)
|....+|+.+++.||+|||... ||||||||+|||+|.+.++||+|||+|+....
T Consensus 173 W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~----------------------- 229 (361)
T KOG1187|consen 173 WETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE----------------------- 229 (361)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc-----------------------
Confidence 5677899999999999999853 99999999999999999999999999964321
Q ss_pred ccCCCCCcCc-ccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 78 YSHDTSHTGQ-VGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 78 ~~~~~~~~~~-~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
. ....... .||..|+|||.+. .+..+.++ ||||+ |+++.|+++|+.
T Consensus 230 -~-~~~~~~~~~gt~gY~~PEy~~---~g~lt~Ks--DVySF--------------GVvllElitgr~ 276 (361)
T KOG1187|consen 230 -G-DTSVSTTVMGTFGYLAPEYAS---TGKLTEKS--DVYSF--------------GVVLLELITGRK 276 (361)
T ss_pred -c-ccceeeecCCCCccCChhhhc---cCCcCccc--ccccc--------------hHHHHHHHhCCc
Confidence 0 1111112 8999999999998 57788888 99999 999999888773
No 407
>KOG0194|consensus
Probab=99.81 E-value=3.8e-20 Score=188.82 Aligned_cols=151 Identities=23% Similarity=0.281 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+..+++.+.++||+|||++++|||||-.+|+|++.++.+||+|||+++.-.. ..
T Consensus 263 ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~--------------------------~~ 316 (474)
T KOG0194|consen 263 EKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ--------------------------YV 316 (474)
T ss_pred HHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcc--------------------------ee
Confidence 5678899999999999999999999999999999999999999999874310 11
Q ss_pred CCc-CcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 83 SHT-GQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~~-~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
... ...-...|+|||.+. ...|+.++ ||||+ ||++||++.. ...|+
T Consensus 317 ~~~~~~klPirWLAPEtl~---~~~~s~kT--DV~sf--------------GV~~~Eif~~--------------g~~Py 363 (474)
T KOG0194|consen 317 MKKFLKKLPIRWLAPETLN---TGIFSFKT--DVWSF--------------GVLLWEIFEN--------------GAEPY 363 (474)
T ss_pred eccccccCcceecChhhhc---cCcccccc--chhhe--------------eeeEEeeecc--------------CCCCC
Confidence 111 223456899999998 66899999 99999 9999998762 23377
Q ss_pred CCchhhhhhhhh-ccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKF-QKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+........++ .++-+...|...+ .....++ ..|+..||++|||+.++.+
T Consensus 364 ~g~~~~~v~~kI~~~~~r~~~~~~~p-------------~~~~~~~-----~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 364 PGMKNYEVKAKIVKNGYRMPIPSKTP-------------KELAKVM-----KQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred CCCCHHHHHHHHHhcCccCCCCCCCH-------------HHHHHHH-----HHhccCChhhccCHHHHHH
Confidence 777777777777 3344444444322 4555666 9999999999999997764
No 408
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.80 E-value=3.4e-19 Score=175.17 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=122.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
|....+++.|++.+.++|+++||.+|.||+|++.+++..+ .+++|++ +.+|+.++|||+.|.+++|+++....
T Consensus 27 p~g~~l~~~l~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sg~~~~~~~~my~~-~~~~~~l~LRP~~~~~~~~~~~~~~~ 105 (298)
T cd00771 27 PKGAIIRNELEDFLRELQRKRGYQEVETPIIYNKELWETSGHWDHYRENMFPF-EEEDEEYGLKPMNCPGHCLIFKSKPR 105 (298)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCEEEECCeecCHHHHhhCCCccccccCceEe-ccCCceEEEcccCCHHHHHHHHhhcc
Confidence 7788899999999999999999999999999999998642 3689999 66789999999999999999886321
Q ss_pred ---CCceeeEeecCccccCCCCC----CccceEEEEEEEEEcCCCCcccH-HHHHHHHHHHHHhCCCCCcEEEcCccc
Q psy7309 383 ---IVSMKRYCIDRVFRERRVLG----FHPRELYECAFDIVTNTPGVLTM-GSLRRCLMGSFRRFNYGNISFAPHPRV 452 (454)
Q Consensus 383 ---~~~~k~~y~g~vfR~~~~~~----g~~rE~~Q~g~eiig~~~~~~~d-~e~~~~~~~~l~~~~~~~~~i~i~~~~ 452 (454)
..|+|+||+|+|||++..+. +|.|||+|.|++++|.+....++ .|++.++.++++.+|+..+.|.+++|.
T Consensus 106 s~~~LPlr~~~~g~vfR~E~~~~~~Gl~R~reF~q~e~~i~~~~e~~~~e~~e~l~~~~~~l~~lgl~~~~i~l~~~~ 183 (298)
T cd00771 106 SYRDLPLRLAEFGTVHRYEQSGALHGLTRVRGFTQDDAHIFCTPDQIKEEIKGVLDLIKEVYSDFGFFDYKVELSTRP 183 (298)
T ss_pred chhhCCeEEEEecCcccCCCCCCCCCccccccEEECCEEEEeCCcchHHHHHHHHHHHHHHHHHcCCCcEEEEEEcCh
Confidence 57999999999999986542 68899999999999876332233 269999999999999999999999874
No 409
>KOG1095|consensus
Probab=99.80 E-value=2.9e-20 Score=202.37 Aligned_cols=155 Identities=23% Similarity=0.309 Sum_probs=125.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+...++.||+.|++||+++++|||||-..|+|++....|||+|||+|+.+.... -.
T Consensus 802 ~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~-----------------------yy 858 (1025)
T KOG1095|consen 802 RDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKD-----------------------YY 858 (1025)
T ss_pred HHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhch-----------------------he
Confidence 4678899999999999999999999999999999999999999999999554311 11
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.....-.-...|||||.+. ...++.++ ||||+ |+++||+++ ....|+
T Consensus 859 r~~~~a~lPvkWm~PEsl~---d~iFtskS--DvWsF--------------GVllWEifs--------------lG~~PY 905 (1025)
T KOG1095|consen 859 RKHGEAMLPVKWMPPESLK---DGIFTSKS--DVWSF--------------GVLLWEIFS--------------LGATPY 905 (1025)
T ss_pred eccCccccceecCCHHHHh---hccccccc--chhhh--------------HHHHHHHHh--------------CCCCCC
Confidence 1111123346799999998 68899999 99999 999999765 345688
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.....+.+.-+..+++...|..++ ....++| ..||+.+|++||+...+++
T Consensus 906 ~~~~n~~v~~~~~~ggRL~~P~~CP-------------~~ly~lM-----~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 906 PSRSNFEVLLDVLEGGRLDPPSYCP-------------EKLYQLM-----LQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCcchHHHHHHHHhCCccCCCCCCC-------------hHHHHHH-----HHHccCChhhCccHHHHHh
Confidence 8888888887677677777777764 4445777 9999999999999998886
No 410
>KOG1026|consensus
Probab=99.80 E-value=4.2e-20 Score=194.74 Aligned_cols=154 Identities=21% Similarity=0.266 Sum_probs=125.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+...|+.||+.|+.||-++.+|||||-..|+|++.+-.|||+|||+++.+... +-.
T Consensus 603 ~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYss-----------------------DYY 659 (774)
T KOG1026|consen 603 SQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSS-----------------------DYY 659 (774)
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhh-----------------------hhh
Confidence 367889999999999999999999999999999999999999999999976531 111
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.......-...|||||.|+ .++|++++ ||||+ ||++||+++.. .-|.
T Consensus 660 k~~~~t~lPIRWMppEsIl---y~kFTteS--DVWs~--------------GVvLWEIFsyG--------------~QPy 706 (774)
T KOG1026|consen 660 KVRGNTLLPIRWMPPESIL---YGKFTTES--DVWSF--------------GVVLWEIFSYG--------------KQPY 706 (774)
T ss_pred cccCCceeeeecCCHHHhh---cCcccchh--hhhhh--------------hhhhhhhhccc--------------cCcc
Confidence 2222334467899999999 88999999 99999 99999977622 2366
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
.+...++.+..+.++.-..-|+.++ .+..+|+ ..||+.+|++|||+.|+-
T Consensus 707 ~glSn~EVIe~i~~g~lL~~Pe~CP-------------~~vY~LM-----~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 707 YGLSNQEVIECIRAGQLLSCPENCP-------------TEVYSLM-----LECWNENPKRRPSFKEIH 756 (774)
T ss_pred cccchHHHHHHHHcCCcccCCCCCC-------------HHHHHHH-----HHHhhcCcccCCCHHHHH
Confidence 6666777777777666666677754 6777888 999999999999999763
No 411
>KOG1151|consensus
Probab=99.79 E-value=1.3e-19 Score=177.76 Aligned_cols=174 Identities=24% Similarity=0.314 Sum_probs=124.4
Q ss_pred hhHHHHHHHHHHHHHHHHHc--CCcccCCCCCcEEEcc---CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQ--GIIHRDLKPVNIFIDY---EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA 76 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~--giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (454)
.+++.|+-||+.||.||.+. -|||-||||.|||+.. .|.+||.|||+++.........
T Consensus 568 KEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~----------------- 630 (775)
T KOG1151|consen 568 KEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNS----------------- 630 (775)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCc-----------------
Confidence 36899999999999999986 4999999999999964 3679999999999765321100
Q ss_pred cccCCCCCcCcccccceeccccccccc-cccccccCCccccchhhhHHHHHHHHHhcceeeee-ecCCchhhHHHHHHHh
Q psy7309 77 FYSHDTSHTGQVGTALYAAPELDSHGV-KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAE-VYKDRPKTLEELKHNI 154 (454)
Q Consensus 77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~-~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~e-l~~~~~~~~~~l~~~i 154 (454)
...........||.+|++||.+.-+. -...+.++ ||||+ |+|+|+ +|+.+|+.-+.-...|
T Consensus 631 -vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKV--DVWSv--------------GVIFyQClYGrKPFGhnqsQQdI 693 (775)
T KOG1151|consen 631 -VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKV--DVWSV--------------GVIFYQCLYGRKPFGHNQSQQDI 693 (775)
T ss_pred -ccceeeecccCceeeecCcceeecCCCCCccccce--eeEee--------------ehhhhhhhccCCCCCCchhHHHH
Confidence 01223345679999999999986321 24567888 99999 999999 4554443222222222
Q ss_pred hhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 155 RRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 155 ~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
...+ -+.+.....||.. ..++++++.|| ++||++.-++|....|+.+||||
T Consensus 694 LqeN-------------TIlkAtEVqFP~K-----------PvVsseAkaFI-----RRCLaYRKeDR~DV~qLA~dpyl 744 (775)
T KOG1151|consen 694 LQEN-------------TILKATEVQFPPK-----------PVVSSEAKAFI-----RRCLAYRKEDRIDVQQLACDPYL 744 (775)
T ss_pred Hhhh-------------chhcceeccCCCC-----------CccCHHHHHHH-----HHHHHhhhhhhhhHHHHccCccc
Confidence 2100 1122334455554 23568899999 99999999999999999999999
Q ss_pred ccCC
Q psy7309 235 LEGS 238 (454)
Q Consensus 235 ~~~~ 238 (454)
...-
T Consensus 745 lPh~ 748 (775)
T KOG1151|consen 745 LPHI 748 (775)
T ss_pred cchh
Confidence 8643
No 412
>TIGR00418 thrS threonyl-tRNA synthetase. This model represents the threonyl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. Note that B. subtilis has closely related isozymes thrS and thrZ. The N-terminal regions are quite dissimilar between archaeal and eubacterial forms, while some eukaryotic forms are missing sequence there altogether..
Probab=99.79 E-value=1e-18 Score=186.84 Aligned_cols=141 Identities=10% Similarity=0.005 Sum_probs=123.9
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
|....+++.|++.++++|.++||.+|.||+|++.+++..+ .++||.|.|.+|+.++|||+.|++++|.++.+..
T Consensus 197 p~g~~~~~~i~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sg~~~~~~~emy~~~d~~~~~~~LrP~~~~~i~~~~~~~~~ 276 (563)
T TIGR00418 197 PKGATIRNLLEDFVRQKQIKYGYMEVETPIMYDLELWEISGHWDNYKERMFPFTELDNREFMLKPMNCPGHFLIFKSSLR 276 (563)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCcccchhhcceeccCCCceEEEecCCCHHHHHHHhCcCC
Confidence 7888899999999999999999999999999999998653 3689999999999999999999999999887542
Q ss_pred ---CCceeeEeecCccccCCCCC----CccceEEEEEEEEEcCCCCcccHHH---HHHHHHHHHHhCCCCCcEEEcCcc
Q psy7309 383 ---IVSMKRYCIDRVFRERRVLG----FHPRELYECAFDIVTNTPGVLTMGS---LRRCLMGSFRRFNYGNISFAPHPR 451 (454)
Q Consensus 383 ---~~~~k~~y~g~vfR~~~~~~----g~~rE~~Q~g~eiig~~~~~~~d~e---~~~~~~~~l~~~~~~~~~i~i~~~ 451 (454)
..|+|+||+|+|||++..+. +|.|||+|.|++++|.. ..+++| ++.++.++++.||+..+.+++|.+
T Consensus 277 s~~~lP~rl~~~g~~fR~E~~g~~~Gl~R~reF~q~~~~~~~~~--~~~~~e~~~~i~~~~~~~~~lgl~~~~~~l~~~ 353 (563)
T TIGR00418 277 SYRDLPLRIAELGYSHRYEQSGELHGLMRVRGFTQDDAHIFCTE--DQIKEEFKNQFRLIQKVYSDFGFSFDKYELSTR 353 (563)
T ss_pred ChHHCCceeeEeccccCCCCCcCCcCcccccceEEeeeEEEcCH--HHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 36999999999999984321 39999999999999973 456666 999999999999998888888864
No 413
>PRK09194 prolyl-tRNA synthetase; Provisional
Probab=99.77 E-value=1.4e-18 Score=185.04 Aligned_cols=156 Identities=12% Similarity=0.074 Sum_probs=132.7
Q ss_pred HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCe
Q psy7309 289 CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSI 362 (454)
Q Consensus 289 ~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~ 362 (454)
++.+...++.+++ |..+.++++|++.+++.|+++||.+|.||.|++.+++..+ .+++|+|.|++|+.
T Consensus 31 ~i~~~~~G~~~~l-------P~g~~~~~~i~~~i~~~~~~~G~~ei~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~ 103 (565)
T PRK09194 31 YIRKLASGIYTYL-------PLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEEYGPELLRLKDRHGRD 103 (565)
T ss_pred CccccCCCeeEEC-------ccHHHHHHHHHHHHHHHHHHcCCEEEECcccCcHHHHhhcCCccccchhceEEecCCCCE
Confidence 4455556666666 8888899999999999999999999999999999998654 26799999999999
Q ss_pred EeeCCCCCHHHHHHHHHc---CCCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCCCcccHH---HHHHHHH
Q psy7309 363 VTLPHDLRIPFARYLAQN---GSIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTPGVLTMG---SLRRCLM 433 (454)
Q Consensus 363 ~~Lr~d~T~p~aR~~a~~---~~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~~~~~d~---e~~~~~~ 433 (454)
++|||..+.+++.+++.. ...+|+|+||+|++||++ +++.| |.|||+|.+++++|.+ ...+|+ +++.++.
T Consensus 104 l~LrPt~e~~~~~~~~~~~~s~~~LP~r~yqi~~~fR~E~rp~~Gl~R~reF~q~d~~~f~~~-~~~a~~~~~~~~~~~~ 182 (565)
T PRK09194 104 FVLGPTHEEVITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHAD-EESLDETYDAMYQAYS 182 (565)
T ss_pred EEECCCChHHHHHHHHhhhhhcccCCeEEEEeeCCccCCCCCCCcccccccEEEeeEEEEcCC-hHHHHHHHHHHHHHHH
Confidence 999997777766655532 225799999999999999 89999 9999999999999987 777887 5667779
Q ss_pred HHHHhCCCCCcEEEcCcccc
Q psy7309 434 GSFRRFNYGNISFAPHPRVL 453 (454)
Q Consensus 434 ~~l~~~~~~~~~i~i~~~~~ 453 (454)
++|+.||+ +|.+.+++++.
T Consensus 183 ~i~~~lgl-~~~~~~~~~g~ 201 (565)
T PRK09194 183 RIFDRLGL-DFRAVEADSGA 201 (565)
T ss_pred HHHHHhCC-ccEEEEccccc
Confidence 99999999 89999888764
No 414
>KOG0590|consensus
Probab=99.76 E-value=5.7e-19 Score=188.10 Aligned_cols=175 Identities=24% Similarity=0.232 Sum_probs=120.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++-.+++|++.|++|+|++||.||||||+|+++..+|.+||+|||.+..+..... ...
T Consensus 420 ~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e---------------------~~~ 478 (601)
T KOG0590|consen 420 LEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE---------------------KNI 478 (601)
T ss_pred hhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc---------------------hhh
Confidence 35678999999999999999999999999999999999999999999885532110 112
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
....+.+|+..|+|||++. +..|+... .||||. |+++..|..++.........
T Consensus 479 ~~~~g~~gS~pY~apE~~~---~~~ydpr~-vDiwS~--------------~ii~~~m~~~~~~Wk~a~~~--------- 531 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLT---GKEYDPRA-VDVWSC--------------GIIYICMILGRFPWKVAKKS--------- 531 (601)
T ss_pred hhhcCcccCCcCcCccccc---ccccCcch-hhhhhc--------------cceEEEEecCCCcccccccc---------
Confidence 4566789999999999998 77887764 599999 99999987765422111000
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS 240 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 240 (454)
.+. +................ .-|. ......+.+| .+||+.||.+|.|++++++.+||++...+
T Consensus 532 --~~~---~~~~~~~~~~~~~~~~~-~~~~-----~lp~~~~~~~-----~~~l~~~P~~R~ti~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 532 --DNS---FKTNNYSDQRNIFEGPN-RLLS-----LLPRETRIII-----YRMLQLDPTKRITIEQILNDEWIRSIECC 594 (601)
T ss_pred --ccc---hhhhccccccccccChH-HHHH-----hchhhHHHHH-----HHHccCChhheecHHHHhhChHhhhcceE
Confidence 000 00000000000000000 0111 1124455667 99999999999999999999999976654
No 415
>KOG4257|consensus
Probab=99.76 E-value=2.3e-19 Score=182.28 Aligned_cols=151 Identities=19% Similarity=0.197 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
...+++||+.||+|||++++|||||...|||+....-|||+|||+++.+.+.. .-.
T Consensus 493 L~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~------------------------yYk 548 (974)
T KOG4257|consen 493 LTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA------------------------YYK 548 (974)
T ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccc------------------------hhh
Confidence 45689999999999999999999999999999999999999999999764311 111
Q ss_pred CcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCC
Q psy7309 84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTG 163 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~ 163 (454)
.+...-..-|||||.+. -..++..+ |||-+ |+++||++. ....||.+
T Consensus 549 aS~~kLPIKWmaPESIN---fRrFTtAS--DVWMF--------------gVCmWEIl~--------------lGvkPfqg 595 (974)
T KOG4257|consen 549 ASRGKLPIKWMAPESIN---FRRFTTAS--DVWMF--------------GVCMWEILS--------------LGVKPFQG 595 (974)
T ss_pred ccccccceeecCccccc---hhcccchh--hHHHH--------------HHHHHHHHH--------------hcCCcccc
Confidence 11223356799999998 67888888 99999 999999443 22346777
Q ss_pred chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 164 SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
-...+.+..++++.+.+.|+.++ +.+..++ .+||.+||.+||+..|+.
T Consensus 596 vkNsDVI~~iEnGeRlP~P~nCP-------------p~LYslm-----skcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 596 VKNSDVIGHIENGERLPCPPNCP-------------PALYSLM-----SKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred ccccceEEEecCCCCCCCCCCCC-------------hHHHHHH-----HHHhccCcccCCcHHHHH
Confidence 67777888888899988888865 6677788 999999999999988764
No 416
>KOG4250|consensus
Probab=99.76 E-value=2.1e-19 Score=185.70 Aligned_cols=98 Identities=32% Similarity=0.506 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc--CCC--eEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY--EDH--VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~--~~~--vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
++..++..+..||.|||++||+||||||+||++-. +|+ .||+|||.|+.+.
T Consensus 121 e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~------------------------- 175 (732)
T KOG4250|consen 121 EFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD------------------------- 175 (732)
T ss_pred HHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC-------------------------
Confidence 57788999999999999999999999999999843 233 6999999999763
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
.+...++.+||+.|.+||+.-+ ...|+..+ |.||+ ||++|++.+|..
T Consensus 176 -d~s~~~S~vGT~~YLhPel~E~--q~~y~~tV--DLWS~--------------GvtlY~caTG~l 222 (732)
T KOG4250|consen 176 -DNSLFTSLVGTEEYLHPELYER--QKKYTATV--DLWSF--------------GVTLYECATGEL 222 (732)
T ss_pred -CCCeeeeecCchhhcChHHHhh--ccCcCcee--ehhhh--------------hhHHHHHhccCC
Confidence 3457888999999999999872 47899999 99999 999999877553
No 417
>KOG0200|consensus
Probab=99.76 E-value=6e-19 Score=189.63 Aligned_cols=154 Identities=25% Similarity=0.336 Sum_probs=116.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+...++.||+.|++||++..+|||||-..|||+..+..+||+|||+|+..... ..
T Consensus 418 ~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~------------------------~~ 473 (609)
T KOG0200|consen 418 KDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNK------------------------DY 473 (609)
T ss_pred HHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCC------------------------Cc
Confidence 357889999999999999999999999999999999999999999999854221 01
Q ss_pred CCCcCccc--ccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVG--TALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~g--T~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
-......| ...|||||.+. ...|+.++ ||||+ |+++||+++ ....
T Consensus 474 y~~~~~~~~LP~kWmApEsl~---~~~ft~kS--DVWSf--------------GI~L~Eifs--------------LG~~ 520 (609)
T KOG0200|consen 474 YRTKSSAGTLPVKWMAPESLF---DRVFTSKS--DVWSF--------------GILLWEIFT--------------LGGT 520 (609)
T ss_pred eEecCCCCccceeecCHHHhc---cCcccccc--hhhHH--------------HHHHHHHhh--------------CCCC
Confidence 11111222 34499999998 67899999 99999 999999765 2334
Q ss_pred CCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 160 PSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 160 p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
|+++.. ....+..+..+.+...|.... ++.-+++ +.||+.+|++||+..|+..
T Consensus 521 PYp~~~~~~~l~~~l~~G~r~~~P~~c~-------------~eiY~iM-----~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 521 PYPGIPPTEELLEFLKEGNRMEQPEHCS-------------DEIYDLM-----KSCWNADPEDRPTFSECVE 574 (609)
T ss_pred CCCCCCcHHHHHHHHhcCCCCCCCCCCC-------------HHHHHHH-----HHHhCCCcccCCCHHHHHH
Confidence 555533 444455555566666666632 5666777 9999999999999997664
No 418
>KOG0196|consensus
Probab=99.75 E-value=9.1e-19 Score=182.05 Aligned_cols=153 Identities=20% Similarity=0.234 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++.-+++.|+.|++||-++|+|||||...|||++.+-.+|++|||+++.+.+.. ..
T Consensus 732 QLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~------------------------~~ 787 (996)
T KOG0196|consen 732 QLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP------------------------EA 787 (996)
T ss_pred hHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCC------------------------Cc
Confidence 567789999999999999999999999999999999999999999999664311 11
Q ss_pred CCcCc--ccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 83 SHTGQ--VGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 83 ~~~~~--~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
..++. .-...|.|||.+. ..+++..+ |+||+ |+++||++. ...-|
T Consensus 788 ~ytt~GGKIPiRWTAPEAIa---~RKFTsAS--DVWSy--------------GIVmWEVmS--------------yGERP 834 (996)
T KOG0196|consen 788 AYTTLGGKIPIRWTAPEAIA---YRKFTSAS--DVWSY--------------GIVMWEVMS--------------YGERP 834 (996)
T ss_pred cccccCCccceeecChhHhh---hcccCchh--hcccc--------------ceEEEEecc--------------cCCCc
Confidence 11111 2246799999999 78888888 99999 999999544 12237
Q ss_pred CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+.++..++.++.++.+-+.+.|-+++ ..++.|+ ..||++|-.+||+..|++.
T Consensus 835 YWdmSNQdVIkaIe~gyRLPpPmDCP-------------~aL~qLM-----ldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 835 YWDMSNQDVIKAIEQGYRLPPPMDCP-------------AALYQLM-----LDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred ccccchHHHHHHHHhccCCCCCCCCc-------------HHHHHHH-----HHHHHHHhhcCCCHHHHHH
Confidence 78888888888888666555555543 6677888 9999999999999997764
No 419
>KOG0199|consensus
Probab=99.75 E-value=8.5e-19 Score=180.18 Aligned_cols=163 Identities=19% Similarity=0.255 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
..-.++.||+.|+.||..+++|||||-..|+|+.....||||||||.+.+.... ..+.
T Consensus 213 ~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne----------------------d~Yv 270 (1039)
T KOG0199|consen 213 RLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE----------------------DMYV 270 (1039)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC----------------------cceE
Confidence 456789999999999999999999999999999999999999999999764311 1111
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......-...|+|||.+. ...++.++ |+|++ |+++|||++.. ..|..
T Consensus 271 m~p~rkvPfAWCaPEsLr---h~kFShaS--DvWmy--------------GVTiWEMFtyG--------------EePW~ 317 (1039)
T KOG0199|consen 271 MAPQRKVPFAWCAPESLR---HRKFSHAS--DVWMY--------------GVTIWEMFTYG--------------EEPWV 317 (1039)
T ss_pred ecCCCcCcccccCHhHhc---cccccccc--hhhhh--------------hhhHHhhhccC--------------CCCCC
Confidence 222233356799999998 67888888 99999 99999988733 24666
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS 238 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~ 238 (454)
+.....+++++..+....-|+.++ .+..+++ +.||.++|.+|||+..+.+.-+..+..
T Consensus 318 G~~g~qIL~~iD~~erLpRPk~cs-------------edIY~im-----k~cWah~paDRptFsair~~~~l~eaq 375 (1039)
T KOG0199|consen 318 GCRGIQILKNIDAGERLPRPKYCS-------------EDIYQIM-----KNCWAHNPADRPTFSAIREDLVLAEAQ 375 (1039)
T ss_pred CCCHHHHHHhccccccCCCCCCCh-------------HHHHHHH-----HHhccCCccccccHHHHHHhHHHHhcC
Confidence 777777888888666666666643 6667777 999999999999999886554444433
No 420
>TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent groups. This group includes enzymes from Escherichia coli, Bacillus subtilis, Aquifex aeolicus, the spirochete Treponema pallidum, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. The other group includes the Pro-specific domain of a human multifunctional tRNA ligase and the prolyl-tRNA synthetases from the Archaea, the Mycoplasmas, and the spirochete Borrelia burgdorferi.
Probab=99.74 E-value=1.4e-17 Score=176.28 Aligned_cols=154 Identities=12% Similarity=0.081 Sum_probs=131.8
Q ss_pred HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCe
Q psy7309 289 CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSI 362 (454)
Q Consensus 289 ~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~ 362 (454)
+..+...+..+++ |..+.++++|++.+++.+.++||++|.+|.|++.+++..+ .+++|+|.|+.|+.
T Consensus 31 ~i~~~~~G~~~~l-------P~g~rv~~~I~~~i~~~~~~~G~~ei~~P~l~~~el~~~sg~~~~~~~emf~~~dr~~~~ 103 (568)
T TIGR00409 31 FIRRLGSGLYNWL-------PLGLRVLKKVENIVREEMNKDGAIEVLLPALQPAELWQESGRWDTYGPELLRLKDRKGRE 103 (568)
T ss_pred CccccCCceEEEC-------ChHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHHhhcCCCCccchhcEEEecCCCCE
Confidence 3344555566666 8888899999999999999999999999999999988653 36899999999999
Q ss_pred EeeCCC----CCHHHHHHHHHcCCCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCCCcccHHHHHHH---H
Q psy7309 363 VTLPHD----LRIPFARYLAQNGSIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTPGVLTMGSLRRC---L 432 (454)
Q Consensus 363 ~~Lr~d----~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~~~~~d~e~~~~---~ 432 (454)
++|||+ +|..++|.+.... .+|+|+||+|++||++ +++.| |.|||+|.+++++|.+ ...+++|...+ .
T Consensus 104 l~LrPT~Ee~~t~~~~~~i~syr-~LPlrlyqi~~~fR~E~rpr~Gl~R~REF~~~d~~~f~~~-~~~a~~e~~~~~~~y 181 (568)
T TIGR00409 104 FVLGPTHEEVITDLARNEIKSYK-QLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSD-EESLDATYQKMYQAY 181 (568)
T ss_pred EEEcCCCcHHHHHHHHHHHhhcc-ccCeEEEEeeCEeeCCCCCCCCccccccEEEEEEEEEeCC-hHHHHHHHHHHHHHH
Confidence 999997 9988888887654 6899999999999998 88889 9999999999999998 77888888755 5
Q ss_pred HHHHHhCCCCCcEEEcCccc
Q psy7309 433 MGSFRRFNYGNISFAPHPRV 452 (454)
Q Consensus 433 ~~~l~~~~~~~~~i~i~~~~ 452 (454)
.++|++||+ +|.+..++++
T Consensus 182 ~~if~~LgL-~~~~v~~~~g 200 (568)
T TIGR00409 182 SNIFSRLGL-DFRPVQADSG 200 (568)
T ss_pred HHHHHHhCC-cceEEEeccc
Confidence 899999999 6777665553
No 421
>PRK12444 threonyl-tRNA synthetase; Reviewed
Probab=99.74 E-value=2e-17 Score=178.89 Aligned_cols=168 Identities=8% Similarity=0.016 Sum_probs=137.6
Q ss_pred HhcCCCChhHHHHHHH----HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc
Q psy7309 273 TLSNPQSKGYKYLVAA----CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT 348 (454)
Q Consensus 273 ~~~~~~s~~~~~~~~~----~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~ 348 (454)
.++.......+.+... .|.+..+++.+++ |....+++.|.+.+.+.+.++||.+|.||.|++.+++..+
T Consensus 238 ~~~~~~~~dH~~l~~~~~l~~~~~~~~G~~~~~-------p~g~~~~~~i~~~~~~~~~~~G~~~v~tP~l~~~~l~~~s 310 (639)
T PRK12444 238 FVEEAAKRNHRKLGKELELFMFSEEAPGMPFYL-------PKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERS 310 (639)
T ss_pred HHHHhccCCHHHHHHHcCCcccccccCcceEEe-------eCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhc
Confidence 3344444445555555 3455666667666 7778889999999999999999999999999999998654
Q ss_pred ------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCCCC--C--ccceEEEEEEEE
Q psy7309 349 ------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRVLG--F--HPRELYECAFDI 415 (454)
Q Consensus 349 ------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~~~--g--~~rE~~Q~g~ei 415 (454)
.+++| +.|.+|+.++|||..|++++|.++.... ..|+|+|++|+|||+++++. | |.|||+|.|+++
T Consensus 311 G~~~~~~~emy-~~d~~~~~~~LrP~~~~~~~~~~~~~~~sy~~LP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~d~~~ 389 (639)
T PRK12444 311 GHWDHYKDNMY-FSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHL 389 (639)
T ss_pred CChhhhhhhcC-eecCCCcEEEEccCCCHHHHHHHhCcccChhhCCceeEEeccccCCCCCcCCcCcceeeeeEEccEEE
Confidence 26899 8899999999999999999999864321 46999999999999998754 7 999999999999
Q ss_pred EcCCCCcccHHH---HHHHHHHHHHhCCCCCcEEEcCcc
Q psy7309 416 VTNTPGVLTMGS---LRRCLMGSFRRFNYGNISFAPHPR 451 (454)
Q Consensus 416 ig~~~~~~~d~e---~~~~~~~~l~~~~~~~~~i~i~~~ 451 (454)
+|.. .. +++| ++.++.++++.||+ +|.+.+++|
T Consensus 390 f~~~-~~-~~~e~~~~~~~~~~i~~~lgl-~~~~~~~~r 425 (639)
T PRK12444 390 FVTP-DQ-IEDEIKSVMAQIDYVYKTFGF-EYEVELSTR 425 (639)
T ss_pred ECCH-HH-HHHHHHHHHHHHHHHHHHcCC-cEEEEEECC
Confidence 9876 33 6777 89999999999999 699988765
No 422
>KOG4278|consensus
Probab=99.73 E-value=2.1e-18 Score=175.01 Aligned_cols=151 Identities=23% Similarity=0.267 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
...++.||.+|+.||..+++|||||...|+|+..+..||++|||+++.... ...+.
T Consensus 367 LlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg------------------------DTYTA 422 (1157)
T KOG4278|consen 367 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG------------------------DTYTA 422 (1157)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcC------------------------Cceec
Confidence 457889999999999999999999999999999999999999999997642 22333
Q ss_pred CcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCC
Q psy7309 84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTG 163 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~ 163 (454)
+.+..-..-|.|||.+. ...++.++ |||++ |+++||+.+ ..-.|+++
T Consensus 423 HAGAKFPIKWTAPEsLA---yNtFSiKS--DVWAF--------------GVLLWEIAT--------------YGMsPYPG 469 (1157)
T KOG4278|consen 423 HAGAKFPIKWTAPESLA---YNTFSIKS--DVWAF--------------GVLLWEIAT--------------YGMSPYPG 469 (1157)
T ss_pred ccCccCcccccCccccc---ccccccch--hhHHH--------------HHHHHHHHh--------------cCCCCCCC
Confidence 44444456799999998 66677777 99999 999999644 22346666
Q ss_pred chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 164 SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
-.......-++++-+..-|+.++ +....|+ +.||+|+|.+||+.+|+-
T Consensus 470 idlSqVY~LLEkgyRM~~PeGCP-------------pkVYeLM-----raCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 470 IDLSQVYGLLEKGYRMDGPEGCP-------------PKVYELM-----RACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred ccHHHHHHHHhccccccCCCCCC-------------HHHHHHH-----HHHhcCCcccCccHHHHH
Confidence 66666666677677777777754 6667888 999999999999988764
No 423
>PRK14799 thrS threonyl-tRNA synthetase; Provisional
Probab=99.73 E-value=8.6e-18 Score=176.21 Aligned_cols=181 Identities=10% Similarity=0.010 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHhcCCCChhHHHHHHH--HhCC---CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCC
Q psy7309 263 ETVLQDMVRQTLSNPQSKGYKYLVAA--CFNQ---KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTP 337 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~s~~~~~~~~~--~f~q---~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp 337 (454)
.+++++.+. .++.......+.+... +|.- ..+++.+++ |..+.+++.|.+.+++++.++||.+|.||
T Consensus 122 ~~~l~~~~~-~~eea~~rdHr~lg~~l~lf~~~~~~~~G~~~~l-------P~G~~i~~~L~~~~r~~~~~~Gy~eV~TP 193 (545)
T PRK14799 122 EEQLKDYLT-WLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFH-------PKGQTIRNELIAFMREINDSMGYQEVYTS 193 (545)
T ss_pred HHHHHHHHH-HHHhcccCCHHHHHHHcCCcccccccCCcceEEc-------ChHHHHHHHHHHHHHHHHHHcCCeEEECC
Confidence 344444444 3333333444444433 3322 244555555 88889999999999999999999999999
Q ss_pred Cccccccccccc------cccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCCCC----Cc
Q psy7309 338 LLTPLNSLTATS------ETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRVLG----FH 404 (454)
Q Consensus 338 ~le~~~~~~~~~------~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~~~----g~ 404 (454)
.++..+++..++ ++||.+ |.+|+.++|||+.|+|++|+++.+.. .+|+|+|++|+|||++.++. +|
T Consensus 194 ~i~~~eL~k~SGh~~~y~~~mf~~-~~~~e~~~LrPm~cp~~~~~~~~~~~SyrdLPlR~~e~g~vfR~E~sg~l~GL~R 272 (545)
T PRK14799 194 HVFKTDIWKISGHYTLYRDKLIVF-NMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLR 272 (545)
T ss_pred ccchHHHHhhccccccchhhccee-eccCceEEeccCCCHHHHHHHhccccChhhCCHhhEEecceecCCCCCCcccccc
Confidence 999999876532 578887 88899999999999999999886432 47999999999999998877 89
Q ss_pred cceEEEEEEEEEcCCCCcccHH-HHHHHHHHHHHhCCCC--CcEEEcCccc
Q psy7309 405 PRELYECAFDIVTNTPGVLTMG-SLRRCLMGSFRRFNYG--NISFAPHPRV 452 (454)
Q Consensus 405 ~rE~~Q~g~eiig~~~~~~~d~-e~~~~~~~~l~~~~~~--~~~i~i~~~~ 452 (454)
.|||+|++++|+|..+...+|+ |++.++.++++.+|++ ++.+.+++|.
T Consensus 273 vReF~Q~DaHif~~~~q~~~E~~~~l~~i~~vy~~fG~~~~~~~i~ls~Rp 323 (545)
T PRK14799 273 VRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRP 323 (545)
T ss_pred ceeEEEcccEEEeCHHHHHHHHHHHHHHHHHHHHHhCCCcccEEEEEEcCh
Confidence 9999999999999873344777 8999999999999995 6999998874
No 424
>KOG1345|consensus
Probab=99.73 E-value=6.8e-18 Score=156.89 Aligned_cols=162 Identities=20% Similarity=0.181 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC--CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED--HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.++++.|+++||.|+|++++||||||.+|||+-..+ .|||||||+++..+.
T Consensus 123 ~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~--------------------------- 175 (378)
T KOG1345|consen 123 TKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT--------------------------- 175 (378)
T ss_pred HHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc---------------------------
Confidence 478999999999999999999999999999996543 799999999875431
Q ss_pred CCCcCcccccceeccccccccccccc--cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMY--NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~--~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
.....--+..|.+||+...-.++.| +... |+|.+ |+++|.+++|.++.....
T Consensus 176 -tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~--D~Wqf--------------GIi~f~cltG~~PWQka~--------- 229 (378)
T KOG1345|consen 176 -TVKYLEYVNNYHAPELCDTVVNEKLVVNPST--DIWQF--------------GIIFFYCLTGKFPWQKAS--------- 229 (378)
T ss_pred -eehhhhhhcccCCcHHHhhccccceEecccc--cchhe--------------eeeeeeeecCCCcchhhh---------
Confidence 1111233557899998754334444 4455 99999 999999998887554221
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCC---CChhhhhcCcccc
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKR---PSSEQNLCQPISL 235 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~R---pta~e~l~hp~f~ 235 (454)
.. ........++.+...+..|..+..| ++.+..+. ++-|.++|++| .++......-|..
T Consensus 230 -~~-d~~Y~~~~~w~~rk~~~~P~~F~~f----------s~~a~r~F-----kk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 230 -IM-DKPYWEWEQWLKRKNPALPKKFNPF----------SEKALRLF-----KKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred -cc-CchHHHHHHHhcccCccCchhhccc----------CHHHHHHH-----HHhcCCcccccchhHHHHHHHHHHHHH
Confidence 00 1111233445555666777775332 25566666 99999999999 6666666666654
No 425
>KOG3653|consensus
Probab=99.72 E-value=1.7e-18 Score=171.68 Aligned_cols=170 Identities=22% Similarity=0.312 Sum_probs=107.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHc---------CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCC
Q psy7309 1 MGRAWRLLREIIEGLSHIHSQ---------GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPP 71 (454)
Q Consensus 1 ~~~i~~i~~qil~gL~~LH~~---------giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~ 71 (454)
|.+..+++..++.||+|||+. .|+|||||..|||+..++++.|+|||+|..+...
T Consensus 306 w~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~---------------- 369 (534)
T KOG3653|consen 306 WNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPG---------------- 369 (534)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCC----------------
Confidence 467889999999999999963 5999999999999999999999999999876421
Q ss_pred CCCCCcccCCCCCcCcccccceecccccccccccccc-----ccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh
Q psy7309 72 IDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYN-----QFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT 146 (454)
Q Consensus 72 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~-----~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~ 146 (454)
.......+.+||..|||||++-. ...+. ... ||||+ |.++||+.+.=...
T Consensus 370 -------~~~~d~~~qVGT~RYMAPEvLEg--ainl~d~~Afkr~--DvYam--------------gLVLWEi~SRC~~~ 424 (534)
T KOG3653|consen 370 -------KPQGDTHGQVGTRRYMAPEVLEG--AINLQDRDAFKRI--DVYAM--------------GLVLWEIASRCTDA 424 (534)
T ss_pred -------CCCcchhhhhhhhhhcCHHHHhh--hcccccHHHHHHH--HHHHH--------------HHHHHHHHhhcccc
Confidence 11223334899999999999861 11122 235 99999 99999965411000
Q ss_pred HHHHHHHhhhcCCCCCC----ch-hhhhhh-hhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCC
Q psy7309 147 LEELKHNIRRENGPSTG----SN-VQKSLQ-KFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPS 220 (454)
Q Consensus 147 ~~~l~~~i~~~~~p~~~----~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~ 220 (454)
.- ....+...||.. .+ ..+... .+.+..++.+|.. |.. ...-.-+.+.+ .-||.+||+
T Consensus 425 ~~---~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~-----W~~---h~~~~~l~et~-----EeCWDhDae 488 (534)
T KOG3653|consen 425 DP---GPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDA-----WRK---HAGMAVLCETI-----EECWDHDAE 488 (534)
T ss_pred cC---CCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhh-----hhc---CccHHHHHHHH-----HHHcCCchh
Confidence 00 000011112211 01 111111 1223455555544 321 12224556677 999999999
Q ss_pred CCCChhh
Q psy7309 221 KRPSSEQ 227 (454)
Q Consensus 221 ~Rpta~e 227 (454)
.|.||.=
T Consensus 489 ARLTA~C 495 (534)
T KOG3653|consen 489 ARLTAGC 495 (534)
T ss_pred hhhhhHH
Confidence 9999863
No 426
>KOG2052|consensus
Probab=99.71 E-value=4.4e-18 Score=167.55 Aligned_cols=170 Identities=21% Similarity=0.301 Sum_probs=109.7
Q ss_pred hhHHHHHHHHHHHHHHHHHc--------CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQ--------GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPID 73 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~--------giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~ 73 (454)
+...+++..+++||+|||-. .|.|||||..|||+..++.+.|+|+|||........
T Consensus 308 ~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~---------------- 371 (513)
T KOG2052|consen 308 EGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTD---------------- 371 (513)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCC----------------
Confidence 35788999999999999953 499999999999999999999999999986543211
Q ss_pred CCCcccCCCCCcCcccccceeccccccccc-cccccccCCccccchhhhHHHHHHHHHhcceeeeeecC----CchhhHH
Q psy7309 74 STAFYSHDTSHTGQVGTALYAAPELDSHGV-KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK----DRPKTLE 148 (454)
Q Consensus 74 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~-~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~----~~~~~~~ 148 (454)
.-+...+..+||..|||||++...- ...++..-.+||||+ |.++||+.. |...
T Consensus 372 -----~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYaf--------------gLVlWEiarRc~~ggi~--- 429 (513)
T KOG2052|consen 372 -----TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAF--------------GLVLWEIARRCESGGIV--- 429 (513)
T ss_pred -----cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHH--------------HHHHHHHHHHhhcCCEe---
Confidence 2345567789999999999985211 223444334599999 666666321 1111
Q ss_pred HHHHHhhhcCCCCCC-----chhhhhhhhhcc-CCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCC
Q psy7309 149 ELKHNIRRENGPSTG-----SNVQKSLQKFQK-SPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKR 222 (454)
Q Consensus 149 ~l~~~i~~~~~p~~~-----~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~R 222 (454)
.+...|+.+ .+..+..+-+.- .-++.+|.. |+. .+.+..+. ++|+-||..||.-|
T Consensus 430 ------eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnr-----W~s------~~~l~~m~--klMkeCW~~Np~aR 490 (513)
T KOG2052|consen 430 ------EEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNR-----WKS------DPALRVMA--KLMKECWYANPAAR 490 (513)
T ss_pred ------hhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcc-----ccc------CHHHHHHH--HHHHHhhcCCchhh
Confidence 122233322 233333333331 222333332 432 13333332 66699999999999
Q ss_pred CChhhh
Q psy7309 223 PSSEQN 228 (454)
Q Consensus 223 pta~e~ 228 (454)
.||--+
T Consensus 491 ltALri 496 (513)
T KOG2052|consen 491 LTALRI 496 (513)
T ss_pred hHHHHH
Confidence 998643
No 427
>TIGR02367 PylS pyrrolysyl-tRNA synthetase. PylS is the archaeal enzyme responsible for charging the pyrrolysine tRNA, PylT, by ligating a free molecule of pyrrolysine. Pyrrolysine is encoded at an in-frame UAG (amber) at least in several corrinoid-dependent methyltransferases of the archaeal genera Methanosarcina and Methanococcoides, such as trimethylamine methyltransferase.
Probab=99.71 E-value=5.3e-17 Score=162.29 Aligned_cols=127 Identities=13% Similarity=0.115 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCcc---cccccccc-----ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC--
Q psy7309 313 SLLESTGDKLRRIFQLHGGAHFQTPLLT---PLNSLTAT-----SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS-- 382 (454)
Q Consensus 313 ~~~~~i~~~l~~~f~~~G~~~i~tp~le---~~~~~~~~-----~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~-- 382 (454)
.-.+++++.++++|..+||.+|.||+|+ .++.+... .+.+|++ ++.++||||+|++++|+++.+..
T Consensus 240 ~~~~~Led~IRevfvg~GFqEV~TPtLt~eE~~E~m~~~~g~eI~n~Iyk~----ee~lvLRPdLTPsLaR~La~N~~~l 315 (453)
T TIGR02367 240 DYLGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLAPNLYNYLRKLDRAL 315 (453)
T ss_pred cHHHHHHHHHHHHHHHCCCEEEECCeecchHHHHhhcCccCCcccccceEe----cCceEecccCHHHHHHHHHHhhhhc
Confidence 3588999999999999999999999995 44433221 1367776 23699999999999999987532
Q ss_pred CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEE
Q psy7309 383 IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFA 447 (454)
Q Consensus 383 ~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~ 447 (454)
..|+|+||+|+|||++..+.||.|||+|+|++++|.+ ...+|+| .++.++|+.+|+ +|.+.
T Consensus 316 ~~PqKIFEIGkVFR~E~~~~thlREF~QL~~eIaG~~-atfaDle--alL~e~Lr~LGI-dfeit 376 (453)
T TIGR02367 316 PDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSG-CTRENLE--AIIKDFLDHLEI-DFEIV 376 (453)
T ss_pred cCCeeEEEEcCeEecCCCCCCCcCeEEEEEEEEECCC-CCHHHHH--HHHHHHHHHCCC-ceEEe
Confidence 5799999999999999999999999999999999987 6666666 699999999998 57664
No 428
>KOG1094|consensus
Probab=99.68 E-value=1.8e-17 Score=167.59 Aligned_cols=95 Identities=23% Similarity=0.296 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
-.+|+.||++|++||.+.+++||||.+.|+|++.++++||+|||.++.+... .....
T Consensus 639 ~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg-----------------------~yy~v 695 (807)
T KOG1094|consen 639 GVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG-----------------------DYYRV 695 (807)
T ss_pred hHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC-----------------------Cceee
Confidence 4579999999999999999999999999999999999999999999976531 11222
Q ss_pred CcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeec
Q psy7309 84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVY 140 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~ 140 (454)
....+-...|||+|.+. .+++++++ |+|++ |+++||++
T Consensus 696 qgr~vlpiRwmawEsil---lgkFttaS--DvWaf--------------gvTlwE~~ 733 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESIL---LGKFTTAS--DVWAF--------------GVTLWEVF 733 (807)
T ss_pred ecceeeeeeehhHHHHH---hccccchh--hhhhh--------------HHHHHHHH
Confidence 33345678899999998 78899999 99999 99999943
No 429
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.67 E-value=3.3e-17 Score=186.08 Aligned_cols=94 Identities=20% Similarity=0.329 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHHHHHHH---HcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 2 GRAWRLLREIIEGLSHIH---SQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH---~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.++.+++.|++.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 780 ~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~------------------------- 833 (968)
T PLN00113 780 ERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC------------------------- 833 (968)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc-------------------------
Confidence 567899999999999999 6699999999999999998888775 66543221
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
......||+.|+|||++. +..|+.++ ||||+ ||++||+++|+.
T Consensus 834 ----~~~~~~~t~~y~aPE~~~---~~~~~~~s--Dv~S~--------------Gvvl~el~tg~~ 876 (968)
T PLN00113 834 ----TDTKCFISSAYVAPETRE---TKDITEKS--DIYGF--------------GLILIELLTGKS 876 (968)
T ss_pred ----cCCCccccccccCccccc---CCCCCccc--chhhH--------------HHHHHHHHhCCC
Confidence 112237899999999987 67788888 99999 999999887664
No 430
>cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.67 E-value=6.4e-16 Score=149.16 Aligned_cols=147 Identities=14% Similarity=0.046 Sum_probs=122.8
Q ss_pred CCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-------ccccEEEEcCCC----Ce
Q psy7309 294 VSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-------SETTASVMTRGG----SI 362 (454)
Q Consensus 294 ~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-------~~~~~~~~d~~G----~~ 362 (454)
.+++.+++ |....++++|++.++..++++||.+|.||.|++.+.+... .+++|.+.|.+| +.
T Consensus 21 ~~G~~~~l-------P~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~~ 93 (264)
T cd00772 21 GRGIINFL-------PLAKAILDKIENVLDKMFKEHGAQNALFPFFILASFLEKEAEHDEGFSKELAVFKDAGDEELEED 93 (264)
T ss_pred CCCEEEEC-------CcHHHHHHHHHHHHHHHHHHcCCeEEECCeeccHHHHhhcCCcccccCccceEEEeCCCCccCce
Confidence 55566666 8888899999999999999999999999999999987532 257899998887 89
Q ss_pred EeeCCCCCHHHHHHHHHcC---CCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCCCcccHHHHHHHH---H
Q psy7309 363 VTLPHDLRIPFARYLAQNG---SIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTPGVLTMGSLRRCL---M 433 (454)
Q Consensus 363 ~~Lr~d~T~p~aR~~a~~~---~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~~~~~d~e~~~~~---~ 433 (454)
++|||+.++|++++++... ..+|+|+|++|+|||++ ++.+| |.|||.|.+..+++.+ ...+++|+..+. .
T Consensus 94 l~LrPt~e~~~~~~~~~~i~s~~~LPlrl~~~~~~fR~E~r~~~Gl~R~reF~~~e~~~~~~~-~e~a~~e~~~~~~~~~ 172 (264)
T cd00772 94 FALRPTLEENIGEIAAKFIKSWKDLPQHLNQIGNKFRDEIRPRFGFLRAREFIMKDGHSAHAD-AEEADEEFLNMLSAYA 172 (264)
T ss_pred EEECCCCCHHHHHHHHhhhhhhhccCeeEEEEeCeEeCcCCCCCCcceeeEEEEeeeEEecCC-HHHHHHHHHHHHHHHH
Confidence 9999999999999887542 15799999999999998 67688 9999999999999876 677888877665 8
Q ss_pred HHHHhCCCCCcEEEc
Q psy7309 434 GSFRRFNYGNISFAP 448 (454)
Q Consensus 434 ~~l~~~~~~~~~i~i 448 (454)
++++.+|.-.|.+..
T Consensus 173 ~i~~~l~~lp~~~~~ 187 (264)
T cd00772 173 EIARDLAAIDFIEGE 187 (264)
T ss_pred HHHHhcCCccEEEEE
Confidence 899999832455443
No 431
>KOG0606|consensus
Probab=99.67 E-value=1.6e-17 Score=178.24 Aligned_cols=178 Identities=25% Similarity=0.302 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCCCcCccc
Q psy7309 10 EIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTSHTGQVG 89 (454)
Q Consensus 10 qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 89 (454)
+.+.+++|||..||+|||+||+|.+++.-|++|+.|||+++.......... ..+++.. ..........+|
T Consensus 151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl---~eg~I~k-------~t~Ef~dKqvcg 220 (1205)
T KOG0606|consen 151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL---KEGHIEK-------DTHEFQDKQVCG 220 (1205)
T ss_pred hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchh---hhcchHH-------HHHHhhhccccC
Confidence 346899999999999999999999999999999999999986543211100 0001100 012234556799
Q ss_pred ccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCCchhhhh
Q psy7309 90 TALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTGSNVQKS 169 (454)
Q Consensus 90 T~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~ 169 (454)
||.|+|||++. ..+|+..+ |+|++ |+|+||++-+. -|+.+....+.
T Consensus 221 TPeyiaPeVil---rqgygkpv--dwwam--------------GiIlyeFLVgc---------------vpffGdtpeel 266 (1205)
T KOG0606|consen 221 TPEYIAPEVIL---RQGYGKPV--DWWAM--------------GIILYEFLVGC---------------VPFFGDTPEEL 266 (1205)
T ss_pred CccccChhhhh---hhccCCCc--cHHHH--------------HHHHHHHheee---------------eeccCCCHHHH
Confidence 99999999998 67899999 99999 99999954332 24455555555
Q ss_pred hhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC---hhhhhcCcccccCCCCCCCccC
Q psy7309 170 LQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS---SEQNLCQPISLEGSSSGLSVLG 246 (454)
Q Consensus 170 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt---a~e~l~hp~f~~~~~~~~~~~~ 246 (454)
+..+. .....+|+.. ....+++.+++ .++|+.+|..|.. +-++.+|+||+. +|
T Consensus 267 fg~vi-sd~i~wpE~d----------ea~p~Ea~dli-----~~LL~qnp~~Rlgt~ga~evk~h~ff~~--------LD 322 (1205)
T KOG0606|consen 267 FGQVI-SDDIEWPEED----------EALPPEAQDLI-----EQLLRQNPLCRLGTGGALEVKQHGFFQL--------LD 322 (1205)
T ss_pred Hhhhh-hhhccccccC----------cCCCHHHHHHH-----HHHHHhChHhhcccchhhhhhhccceee--------cc
Confidence 55554 3333444432 23448889999 9999999999964 778889999984 56
Q ss_pred ccccccCCC
Q psy7309 247 SEQLLTCDH 255 (454)
Q Consensus 247 ~~~ll~~~~ 255 (454)
|.-||..+.
T Consensus 323 w~~llRqka 331 (1205)
T KOG0606|consen 323 WKSLLRQKA 331 (1205)
T ss_pred cchhhhhhc
Confidence 666664443
No 432
>cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP binding and hydrolysis. This alignment contains only sequences from the GlyRS form which homodimerizes. The heterotetramer glyQ is in a different family of class II aaRS. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the N-terminus of the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). Pol gamma b stimulates processive DNA synthesis and is functional as a homodimer, which can associate with the catalytic subunit Pol gamma alpha to form a heterotrimer. Despite significant both structural and sequence similarity with Gly
Probab=99.67 E-value=1.9e-16 Score=152.24 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=112.4
Q ss_pred CCCccccccccccCCchhhHHHHHHHHHHHHHHHhcC--CccccCCCccccccccccccccEEEE----cCCCCeEeeCC
Q psy7309 294 VSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHG--GAHFQTPLLTPLNSLTATSETTASVM----TRGGSIVTLPH 367 (454)
Q Consensus 294 ~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G--~~~i~tp~le~~~~~~~~~~~~~~~~----d~~G~~~~Lr~ 367 (454)
..++.|++ |....++++|++.+++.|.++| |.+|+||++++.+.| ++. |.+|+.++|||
T Consensus 21 ~~G~~d~~-------P~g~~l~~~i~~~~~~~~~~~g~~~~~i~tP~i~~~~mf--------~~~~g~~d~~~~~~~Lrp 85 (254)
T cd00774 21 VAGFYDYG-------PLGVELKNNIKSAWRKSFVLEEEDMLEIDSPIITPELMF--------KTSIGPVESGGNLGYLRP 85 (254)
T ss_pred hhcccccC-------chHHHHHHHHHHHHHHHHHhcCCCeEEEeccccCCHHHh--------eeeecccCCCCcccccCC
Confidence 34555666 8888899999999999999996 999999999999544 443 56678999999
Q ss_pred CCC----HHHHHHHHHcCCCCceeeEeecCccccCCCCC---CccceEEEEEEEEEcCCCC-cccHHHHHHHHHHHHHhC
Q psy7309 368 DLR----IPFARYLAQNGSIVSMKRYCIDRVFRERRVLG---FHPRELYECAFDIVTNTPG-VLTMGSLRRCLMGSFRRF 439 (454)
Q Consensus 368 d~T----~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~~---g~~rE~~Q~g~eiig~~~~-~~~d~e~~~~~~~~l~~~ 439 (454)
+.| ++++|.+..+....|+|+|++|+|||++..++ +|.|||+|++++++|.++. ...-..++.+..+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~lP~~~~qig~~fR~E~~~~~gl~R~ReF~q~d~~~f~~~~~~~e~~~~v~~~~~~~l~~~ 165 (254)
T cd00774 86 ETAQGIFVNFKNLLEFNRRKLPFGVAQIGKSFRNEISPRNGLFRVREFTQAEIEFFVDPEKSHPWFDYWADQRLKWLPKF 165 (254)
T ss_pred cccchHHHHHHHHHHHhCCCCCchhhhhchhhccccCcccceeeeccchhhheeeeECCCCchHHHHHHHHHHHHHHHHc
Confidence 999 89999987654479999999999999988776 8999999999999997632 233456888889999999
Q ss_pred CCCC
Q psy7309 440 NYGN 443 (454)
Q Consensus 440 ~~~~ 443 (454)
|++.
T Consensus 166 G~~~ 169 (254)
T cd00774 166 AQSP 169 (254)
T ss_pred CCCc
Confidence 9854
No 433
>KOG1152|consensus
Probab=99.67 E-value=4e-17 Score=165.06 Aligned_cols=97 Identities=36% Similarity=0.574 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+++-||+||..|+++||++||||||||-+|+.++.+|-+||+|||.|.... ..
T Consensus 671 eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~k---------------------------sg 723 (772)
T KOG1152|consen 671 EAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK---------------------------SG 723 (772)
T ss_pred HHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhc---------------------------CC
Confidence 688999999999999999999999999999999999999999999987542 23
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeee-ecCCch
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAE-VYKDRP 144 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~e-l~~~~~ 144 (454)
.-..++||..|.|||++. +..|-.+. .|||++ |+++|. +|.+.|
T Consensus 724 pfd~f~gtv~~aapevl~---g~~y~gk~-qdiwal--------------gillytivykenp 768 (772)
T KOG1152|consen 724 PFDVFVGTVDYAAPEVLG---GEKYLGKP-QDIWAL--------------GILLYTIVYKENP 768 (772)
T ss_pred CcceeeeeccccchhhhC---CCccCCCc-chhhhh--------------hheeeEEEeccCC
Confidence 455689999999999998 67776553 599999 999999 555443
No 434
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.66 E-value=6.2e-17 Score=147.86 Aligned_cols=122 Identities=39% Similarity=0.575 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
+.++.++.+++.+|++||++|++|+||+|.||+++. ++.++|+|||.+......
T Consensus 92 ~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~------------------------- 146 (215)
T cd00180 92 DEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD------------------------- 146 (215)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC-------------------------
Confidence 467899999999999999999999999999999999 899999999998754210
Q ss_pred CCCCcCcccccceeccccccccccc-cccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKA-MYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~-~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
........++..|++||.+. .. .++... |+||+ |++++++
T Consensus 147 ~~~~~~~~~~~~~~~pe~~~---~~~~~~~~~--D~~~l--------------g~~~~~l-------------------- 187 (215)
T cd00180 147 KSLLKTIVGTPAYMAPEVLL---GKGYYSEKS--DIWSL--------------GVILYEL-------------------- 187 (215)
T ss_pred cchhhcccCCCCccChhHhc---ccCCCCchh--hhHHH--------------HHHHHHH--------------------
Confidence 00233456788999999987 33 667777 99999 9998886
Q ss_pred CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309 160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP 232 (454)
Q Consensus 160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp 232 (454)
....+++ .+||+.||.+||+++++++|+
T Consensus 188 ----------------------------------------~~~~~~l-----~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------------------------------PELKDLI-----RKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------------------------------HHHHHHH-----HHHhhCCcccCcCHHHHhhCC
Confidence 1123666 999999999999999999875
No 435
>PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes. seryl tRNA synthetase structure; InterPro: IPR002314 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain includes the glycine, histidine, proline, threonine and serine tRNA synthetases.; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3UH0_A 3UGT_C 3UGQ_A 1B76_B 1GGM_B 1ATI_A 1ADY_C 1ADJ_C 2I4O_A 2I4M_B ....
Probab=99.65 E-value=3.6e-16 Score=141.74 Aligned_cols=139 Identities=17% Similarity=0.151 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHH-hcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC----
Q psy7309 314 LLESTGDKLRRIFQ-LHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS---- 382 (454)
Q Consensus 314 ~~~~i~~~l~~~f~-~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~---- 382 (454)
+++.|++.+.+.+. ++||.+|.+|+|.+.+++... .+++|.+.|.+++.++|||..+.+++++++....
T Consensus 1 l~~~l~~~~~~~~~~~~G~~ev~~P~l~~~~~~~~sg~~~~~~~~~~~~~~~~~~~~~L~pt~~~~~~~~~~~~~~~~~~ 80 (173)
T PF00587_consen 1 LRNALERFIREEFVLKFGFQEVDTPILIPSEVWEKSGHWDNFSDEMFKVKDRGDEEYCLRPTSEPGIYSLFKNEIRSSYR 80 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEB--SEEEHHHHHHHSHHHHHGGGSEEEEETTTEEEEE-SSSHHHHHHHHHHHEEBHGG
T ss_pred CHHHHHHHHHHHhHHhcCCEEEECCeEEehHHhhhccccccccCCeeeeeecccccEEeccccccceeeeecceeeeccc
Confidence 47889999999999 999999999999999987653 2679999999999999999999999999886321
Q ss_pred CCceeeEeecCccccC-CC--CCCccceEEEEEEEEEcCCC-CcccHHHHHHHHHHHHHhCCCCCcEEEcCccc
Q psy7309 383 IVSMKRYCIDRVFRER-RV--LGFHPRELYECAFDIVTNTP-GVLTMGSLRRCLMGSFRRFNYGNISFAPHPRV 452 (454)
Q Consensus 383 ~~~~k~~y~g~vfR~~-~~--~~g~~rE~~Q~g~eiig~~~-~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~~ 452 (454)
.+|+|+|++|+|||++ ++ +-.|.|||+|.++.++|.+. ......+++.++.++++.||+++|.+..++++
T Consensus 81 ~LP~~~~~~g~~fR~E~~~~~gl~R~reF~~~e~~~f~~~~~~~~~~~~~~~~~~~i~~~lgl~~~~~~~~~~~ 154 (173)
T PF00587_consen 81 DLPLKLYQIGTCFRNEARPTRGLFRLREFTMDEMHIFCTPEQSEEEFEELLELYKEILEKLGLEPYRIVLSSSG 154 (173)
T ss_dssp GSSEEEEEEEEEEBSSSSSBSTTTS-SEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTSGCEEEEEEETC
T ss_pred cCCeEEeecccccccccccccccceeeEeeeeceEEEeCCcccHHHHHHHHHHHHHHHHHcCCceEEEEEcCCC
Confidence 4799999999999998 33 35788999999999999863 44678889999999999999988999987763
No 436
>PLN02908 threonyl-tRNA synthetase
Probab=99.65 E-value=9.8e-16 Score=166.35 Aligned_cols=179 Identities=9% Similarity=0.032 Sum_probs=145.4
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHH----HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCc
Q psy7309 264 TVLQDMVRQTLSNPQSKGYKYLVAA----CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLL 339 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~s~~~~~~~~~----~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~l 339 (454)
+++++.+. .++.......+.+... .|.+..+++.+++ |....+++.|.+.+++.+.++||.+|.||.|
T Consensus 277 ~~l~~~~~-~~~e~~~rdH~~lg~~~~lf~~~~~~~G~~~~l-------P~g~~i~~~l~~~~~~~~~~~G~~ev~tP~l 348 (686)
T PLN02908 277 KLLKEYKH-RIEEAKKRDHRLLGQKQELFFFHELSPGSCFFL-------PHGARIYNKLMDFIREQYWERGYDEVITPNI 348 (686)
T ss_pred HHHHHHHh-hhhhccccCHHHHHHhcCCeeecCCCCcceEEe-------chHHHHHHHHHHHHHHHHHHcCCEEEECCcc
Confidence 34444444 4455455555555543 3455555666666 7888899999999999999999999999999
Q ss_pred ccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCC----CCCccc
Q psy7309 340 TPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRV----LGFHPR 406 (454)
Q Consensus 340 e~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~----~~g~~r 406 (454)
++.+++..+ .++||.| |.+|+.++|||..++++|++++.... .+|+|+|++|+|||++.. +-+|.|
T Consensus 349 ~~~~l~~~sGh~~~~~~~mf~~-~~~~~~~~Lrp~~~~~~~~~~~~~~~s~r~LPlr~~~~g~~fR~E~~~~l~Gl~RvR 427 (686)
T PLN02908 349 YNMDLWETSGHAAHYKENMFVF-EIEKQEFGLKPMNCPGHCLMFAHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVR 427 (686)
T ss_pred ccHHHHhhcCCccccchhccEE-ecCCeeEEEcCCCcHHHHHHHhccccChhhCCHhHEEeeccccCCCCcCCcCccccc
Confidence 999998653 2679988 77899999999999999999886432 479999999999999876 446999
Q ss_pred eEEEEEEEEEcCCCCcccHH-HHHHHHHHHHHhCCCCCcEEEcCccc
Q psy7309 407 ELYECAFDIVTNTPGVLTMG-SLRRCLMGSFRRFNYGNISFAPHPRV 452 (454)
Q Consensus 407 E~~Q~g~eiig~~~~~~~d~-e~~~~~~~~l~~~~~~~~~i~i~~~~ 452 (454)
||+|++++|++..+...++. |++.++.++++.+|+ +|.+.+++|.
T Consensus 428 eF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~-~~~~~ls~r~ 473 (686)
T PLN02908 428 RFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGF-TYELKLSTRP 473 (686)
T ss_pred cEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCC-cEEEEEeCCc
Confidence 99999999999965777888 899999999999999 6999999984
No 437
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional
Probab=99.65 E-value=6.2e-16 Score=161.81 Aligned_cols=136 Identities=18% Similarity=0.199 Sum_probs=114.3
Q ss_pred CchhhHHHHHHHHHHHHHHHhcCCccccCCCcccc-------------------cccccccc------------------
Q psy7309 308 RSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPL-------------------NSLTATSE------------------ 350 (454)
Q Consensus 308 ~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~-------------------~~~~~~~~------------------ 350 (454)
.|++...+.++++.++++|..+||.+|++|.+|.. |+|..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~f~~~Gf~e~~~p~vE~~~~nfd~lf~p~~hpaR~~~dtf~~~~~~~~~~~~~~~~~v~~~he 307 (489)
T PRK04172 228 YPGKKHPYREFIDEVRDILVEMGFEEMKGPLVETEFWNFDALFQPQDHPAREMQDTFYLKYPGIGDLPEELVERVKEVHE 307 (489)
T ss_pred CCCCCChHHHHHHHHHHHHHHCCCEEeeCCeeeecCcccccccCCCCCCCCCccceEEECCcccccCcHHHHHHHHHHHh
Confidence 36666789999999999999999999999999943 55432210
Q ss_pred ---------ccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCC
Q psy7309 351 ---------TTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPG 421 (454)
Q Consensus 351 ---------~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~ 421 (454)
-.|.+.|+.++.++||+++|+++||+++.++ ..|+|+|++|+|||+++++.+|.+||+|++++++|.+
T Consensus 308 ~g~~~~~~~~~y~~~~~~~~~~~LR~~~T~~~~r~l~~~~-~~p~rlFeiGrVFR~e~~d~~~l~Ef~ql~~~i~G~~-- 384 (489)
T PRK04172 308 HGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLASRP-EPPQKYFSIGRVFRPDTIDATHLPEFYQLEGIVMGED-- 384 (489)
T ss_pred ccCCCCCccccCCcchhhhhccccccCChHHHHHHHHhcC-CCCeEEEEecceEcCCCCCcccCCchheEEEEEEeCC--
Confidence 0466667778899999999999999999876 6899999999999998888899999999999999975
Q ss_pred cccHHHHHHHHHHHHHhCCCCCcEEE
Q psy7309 422 VLTMGSLRRCLMGSFRRFNYGNISFA 447 (454)
Q Consensus 422 ~~~d~e~~~~~~~~l~~~~~~~~~i~ 447 (454)
....+++.++.+++..+|+.++.+.
T Consensus 385 -~~f~elkg~l~~ll~~lGi~~~~~~ 409 (489)
T PRK04172 385 -VSFRDLLGILKEFYKRLGFEEVKFR 409 (489)
T ss_pred -CCHHHHHHHHHHHHHHhCCceEEEc
Confidence 2479999999999999998655553
No 438
>KOG1025|consensus
Probab=99.62 E-value=5.1e-16 Score=162.42 Aligned_cols=154 Identities=21% Similarity=0.226 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
....|..||+.||.|||+++++||||-..|||+...+++||.|||+|+.+... +. .-
T Consensus 799 ~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d--------~~---------------ey 855 (1177)
T KOG1025|consen 799 DLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD--------EK---------------EY 855 (1177)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc--------cc---------------cc
Confidence 46779999999999999999999999999999999999999999999865321 00 00
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
......-.+-|||-|.+. ...|+.++ ||||+ |+++||+++.. ..|..
T Consensus 856 ~~~~gK~pikwmale~i~---~~~~thqS--DVWsf--------------GVtiWElmTFG--------------a~Py~ 902 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIR---IRKYTHQS--DVWSF--------------GVTIWELMTFG--------------AKPYD 902 (1177)
T ss_pred cccccccCcHHHHHHHhh---ccCCCchh--hhhhh--------------hhhHHHHHhcC--------------CCccC
Confidence 111122356799999998 78899999 99999 99999976632 23555
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
+....++-..++.+.+..-|+..+ -+...++ .+||..|+..||+++++..
T Consensus 903 gi~~~eI~dlle~geRLsqPpiCt-------------iDVy~~m-----vkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 903 GIPAEEIPDLLEKGERLSQPPICT-------------IDVYMVM-----VKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred CCCHHHhhHHHhccccCCCCCCcc-------------HHHHHHH-----HHHhccCcccCccHHHHHH
Confidence 555555555666566655555432 3344566 8999999999999998764
No 439
>KOG1033|consensus
Probab=99.62 E-value=6.2e-17 Score=163.24 Aligned_cols=151 Identities=30% Similarity=0.421 Sum_probs=113.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.....++.|+..|+.| +|.+|||+||.||++..++.+||+|||+........ ......
T Consensus 359 s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~-------------------~~~~~~ 416 (516)
T KOG1033|consen 359 SLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDE-------------------TVAPAA 416 (516)
T ss_pred hHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCC-------------------cccchh
Confidence 4578899999999999 999999999999999999999999999988543210 000234
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-C-----chhhHHHHHHHhh
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-D-----RPKTLEELKHNIR 155 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~-----~~~~~~~l~~~i~ 155 (454)
..++..+||..||+||.+. +..|+.++ ||||| |+++||++. . +..+..++
T Consensus 417 a~~t~~~gt~~YmsPEQi~---g~~y~~kv--dIyaL--------------Glil~EL~~~f~T~~er~~t~~d~----- 472 (516)
T KOG1033|consen 417 ASHTQQVGTLLYMSPEQIR---GQQYSEKV--DIYAL--------------GLILAELLIQFSTQFERIATLTDI----- 472 (516)
T ss_pred hhhhhcccccccCCHHHHh---hhhhhhhc--chhhH--------------HHHHHHHHHHhccHHHHHHhhhhh-----
Confidence 5788899999999999999 89999999 99999 999999543 1 11222222
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309 156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS 234 (454)
Q Consensus 156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f 234 (454)
....+|+.. ....+....|+ .+||...|.+||++.+.-.|+|.
T Consensus 473 ---------------------r~g~ip~~~----------~~d~p~e~~ll-----~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 473 ---------------------RDGIIPPEF----------LQDYPEEYTLL-----QQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred ---------------------hcCCCChHH----------hhcCcHHHHHH-----HHhcCCCcccCchHHHHhhhhhc
Confidence 122334221 11235666788 99999999999988877777664
No 440
>KOG1024|consensus
Probab=99.61 E-value=4.3e-16 Score=151.30 Aligned_cols=153 Identities=17% Similarity=0.200 Sum_probs=109.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
++..++.|+..|++|||++|+||.||...|+++++.-+|||+|=.+++.+-. ....
T Consensus 397 qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP------------------------~DYh 452 (563)
T KOG1024|consen 397 QLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP------------------------GDYH 452 (563)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCc------------------------cccc
Confidence 4567899999999999999999999999999999999999999999985421 0111
Q ss_pred CC-cCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309 83 SH-TGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS 161 (454)
Q Consensus 83 ~~-~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~ 161 (454)
.. .+.-....||+||.+. +..|+..+ |+||+ |+++||+++- ...|.
T Consensus 453 cLGDnEnRPvkWMslEal~---n~~yssas--DvWsf--------------GVllWELmtl--------------g~~Py 499 (563)
T KOG1024|consen 453 CLGDNENRPVKWMSLEALQ---NSHYSSAS--DVWSF--------------GVLLWELMTL--------------GKLPY 499 (563)
T ss_pred ccCCCCCCcccccCHHHHh---hhhhcchh--hhHHH--------------HHHHHHHHhc--------------CCCCc
Confidence 11 1112355799999999 78899988 99999 9999996541 12233
Q ss_pred CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.+-+..+...-+..+.+..-|-.++ +++..++ ..||..+|++|||.+|+..
T Consensus 500 aeIDPfEm~~ylkdGyRlaQP~NCP-------------DeLf~vM-----acCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 500 AEIDPFEMEHYLKDGYRLAQPFNCP-------------DELFTVM-----ACCWALLPEERPSFSQLVI 550 (563)
T ss_pred cccCHHHHHHHHhccceecCCCCCc-------------HHHHHHH-----HHHHhcCcccCCCHHHHHH
Confidence 3333333333333333333343332 4555566 9999999999999998764
No 441
>KOG0603|consensus
Probab=99.58 E-value=5.6e-16 Score=159.20 Aligned_cols=146 Identities=23% Similarity=0.255 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT 82 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
.++.+..+++.|++++|+.||+|||+|++||+++.+|++|+.|||+++.....
T Consensus 98 ~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~--------------------------- 150 (612)
T KOG0603|consen 98 DVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE--------------------------- 150 (612)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhh---------------------------
Confidence 46678889999999999999999999999999999999999999999965421
Q ss_pred CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309 83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST 162 (454)
Q Consensus 83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~ 162 (454)
...|||..|||||++. .....+ |.||+ |++.||+++|..+...+...+|.
T Consensus 151 --~~~cgt~eymApEI~~-----gh~~a~--D~ws~--------------gvl~felltg~~pf~~~~~~~Il------- 200 (612)
T KOG0603|consen 151 --KIACGTYEYRAPEIIN-----GHLSAA--DWWSF--------------GVLAFELLTGTLPFGGDTMKRIL------- 200 (612)
T ss_pred --hhcccchhhhhhHhhh-----ccCCcc--cchhh--------------hhhHHHHhhCCCCCchHHHHHHh-------
Confidence 1119999999999986 356667 99999 99999987755432223333332
Q ss_pred CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309 163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE 236 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~ 236 (454)
.....+|... +..+.+++ ..++..+|.+|..+ .|+++|+||..
T Consensus 201 -------------~~~~~~p~~l-------------~~~a~~~~-----~~l~~r~p~nrLg~~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 201 -------------KAELEMPREL-------------SAEARSLF-----RQLFKRNPENRLGAGPDGVDEIKQHEFFQS 248 (612)
T ss_pred -------------hhccCCchhh-------------hHHHHHHH-----HHHHhhCHHHHhccCcchhHHHhccchhee
Confidence 2233444442 26777888 99999999999865 78999999985
No 442
>PRK12325 prolyl-tRNA synthetase; Provisional
Probab=99.53 E-value=2.4e-14 Score=147.99 Aligned_cols=153 Identities=12% Similarity=0.115 Sum_probs=127.1
Q ss_pred HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCe
Q psy7309 289 CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSI 362 (454)
Q Consensus 289 ~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~ 362 (454)
++.+..+++..++ |..+.++++|++.+++.+.++||++|.||.|++.+++..+ .+++|++.|.+++.
T Consensus 31 ~~~~~~~G~~~~l-------P~g~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~ 103 (439)
T PRK12325 31 MIRQQAAGIYSWL-------PLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLWRESGRYDAYGKEMLRIKDRHDRE 103 (439)
T ss_pred CccccCCceEEEC-------CcHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhheEEecCCCCE
Confidence 4455555555555 8888899999999999999999999999999999988643 26899999999999
Q ss_pred EeeCC---CCCHHHHHHHHHcCCCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCC--CcccHHHHHHHHHH
Q psy7309 363 VTLPH---DLRIPFARYLAQNGSIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTP--GVLTMGSLRRCLMG 434 (454)
Q Consensus 363 ~~Lr~---d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~--~~~~d~e~~~~~~~ 434 (454)
++||| +.+.+++|...+....+|+|+|++|+|||++ ++..| |.|||+|-+.=+++.+. ......+++.+..+
T Consensus 104 ~~L~Pt~e~~~~~~~~~~~~syrdLPlrl~q~~~~fR~E~~~~~GL~R~reF~~~D~h~f~~~~~~a~~~~~~~~~~~~~ 183 (439)
T PRK12325 104 MLYGPTNEEMITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDEEGARHSYNRMFVAYLR 183 (439)
T ss_pred EEEcCCCcHHHHHHHHHHhhhchhhchHheEecCEecCCCCCCCCccccceEeEeccEEEeCCHHHHHHHHHHHHHHHHH
Confidence 99999 9999999987765436999999999999998 67778 99999997766665431 23467889999999
Q ss_pred HHHhCCCCCcEEEc
Q psy7309 435 SFRRFNYGNISFAP 448 (454)
Q Consensus 435 ~l~~~~~~~~~i~i 448 (454)
+|+.+|+..+.+..
T Consensus 184 i~~~lgl~~~~v~~ 197 (439)
T PRK12325 184 TFARLGLKAIPMRA 197 (439)
T ss_pred HHHHcCCceEEEEE
Confidence 99999997666654
No 443
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed
Probab=99.51 E-value=6.4e-14 Score=140.86 Aligned_cols=126 Identities=15% Similarity=0.160 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCccccccccc---c-----ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC--C
Q psy7309 314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA---T-----SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS--I 383 (454)
Q Consensus 314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~---~-----~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~--~ 383 (454)
-.++|++.|+++|..+||.+|.||+|...+.+.. . .+.+|.+ ++.++|||++|++++|+++.+.. .
T Consensus 205 ~~s~Le~aIR~~f~~~GF~EV~TPtLt~ee~~e~~g~~~g~~i~~~my~i----deel~LRpsLtPsLlr~la~n~k~~~ 280 (417)
T PRK09537 205 YLGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLAPGLYNYLRKLDRILP 280 (417)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCeeecHHHHHHhCCCCcccchhhheee----CCceEehhhhHHHHHHHHHhhhhccc
Confidence 3789999999999999999999999976554321 1 1346664 34799999999999999886432 5
Q ss_pred CceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEE
Q psy7309 384 VSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFA 447 (454)
Q Consensus 384 ~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~ 447 (454)
.|+|+|++|+|||++..+.++.+||+|++++++|.. ... +|+..++.++|+.+|+ +|++.
T Consensus 281 ~P~RIFEIG~VFR~E~~g~~hlrEf~Ql~~~iiGs~-~~f--~dL~~lleeLL~~LGI-~f~i~ 340 (417)
T PRK09537 281 DPIKIFEIGPCYRKESDGKEHLEEFTMVNFCQMGSG-CTR--ENLENIIDDFLKHLGI-DYEII 340 (417)
T ss_pred CCeeEEEEeceEecCCCCCCCcceEEEEEEEEeCCc-hHH--HHHHHHHHHHHHHCCC-CcEEe
Confidence 799999999999999888899999999999999876 444 4577999999999998 57665
No 444
>PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional
Probab=99.49 E-value=4.1e-13 Score=137.54 Aligned_cols=127 Identities=20% Similarity=0.206 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHhcCCccccCC-Cccc----ccccc-c------cccccEEEEcC-----------------------
Q psy7309 314 LLESTGDKLRRIFQLHGGAHFQTP-LLTP----LNSLT-A------TSETTASVMTR----------------------- 358 (454)
Q Consensus 314 ~~~~i~~~l~~~f~~~G~~~i~tp-~le~----~~~~~-~------~~~~~~~~~d~----------------------- 358 (454)
-...+++.++++|..-||.++++| .+|. .|.+. . ....+|-+-++
T Consensus 230 Pl~~~~~~i~~if~~mGF~e~~~~~~ves~f~NFDaL~~PqdHPARd~~DTFyl~~~~~~~~~~~p~~~~~~Vk~~He~G 309 (494)
T PTZ00326 230 PLLKVRREFREILLEMGFEEMPTNRYVESSFWNFDALFQPQQHPARDAQDTFFLSKPETSKVNDLDDDYVERVKKVHEVG 309 (494)
T ss_pred hHHHHHHHHHHHHHhCCCEEecCCCCccccchhhhhhcCCCCCCCCCcCceEEEcCccccccccCcHHHHHHHHHHhccC
Confidence 577899999999999999999876 3443 22221 1 12456665431
Q ss_pred --------------CCCeEeeCCCCCHHHHHHHHHcC------C-CCceeeEeecCccccCCCCCCccceEEEEEEEEEc
Q psy7309 359 --------------GGSIVTLPHDLRIPFARYLAQNG------S-IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVT 417 (454)
Q Consensus 359 --------------~G~~~~Lr~d~T~p~aR~~a~~~------~-~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig 417 (454)
..+.++||++.|++.||+++.+. . ..|.|+|++|+|||++....+|.+||+|++.+++|
T Consensus 310 ~~gS~Gw~y~W~~e~a~~~vLRtHtTa~~aR~l~~~~~~~~~~~~~~P~k~fsigrVfR~d~~DatH~~eFhQ~Eg~vi~ 389 (494)
T PTZ00326 310 GYGSIGWRYDWKLEEARKNILRTHTTAVSARMLYKLAQEYKKTGPFKPKKYFSIDRVFRNETLDATHLAEFHQVEGFVID 389 (494)
T ss_pred CcCCcccccccccchhccccccCCCCHHHHHHHHhhccccccccCCCCceEEecCCEecCCCCCCCcCceeEEEEEEEEe
Confidence 11469999999999999999752 1 24999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHHHHHHhCCCCC
Q psy7309 418 NTPGVLTMGSLRRCLMGSFRRFNYGN 443 (454)
Q Consensus 418 ~~~~~~~d~e~~~~~~~~l~~~~~~~ 443 (454)
.. . ++++++.++.++++++|+.+
T Consensus 390 ~~-~--s~~~L~~~l~~f~~~lG~~~ 412 (494)
T PTZ00326 390 RN-L--TLGDLIGTIREFFRRIGITK 412 (494)
T ss_pred CC-C--CHHHHHHHHHHHHHhcCCCc
Confidence 87 2 78999999999999999866
No 445
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.46 E-value=3.2e-14 Score=132.39 Aligned_cols=101 Identities=36% Similarity=0.487 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
..++.++.|++.+|.+||++|++|+||+|.||+++.++.++|+|||.+...... ..
T Consensus 98 ~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~------------------------~~ 153 (225)
T smart00221 98 EEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD------------------------LA 153 (225)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc------------------------cc
Confidence 357889999999999999999999999999999999999999999998754321 00
Q ss_pred CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309 82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP 144 (454)
Q Consensus 82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~ 144 (454)
.......++..|++||++. ....++.+. |+||+ |++++++++|+.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~--~~~~~~~~~--Dv~~l--------------G~~~~~l~~g~~ 198 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLL--GGKGYGEAV--DIWSL--------------GVILYELLWGPE 198 (225)
T ss_pred ccccceeccCCcCCHhHhc--CCCCCCchh--hHHHH--------------HHHHHHHHHCCC
Confidence 1234457788999999984 256677777 99999 999999776654
No 446
>KOG4158|consensus
Probab=99.45 E-value=8.9e-14 Score=135.74 Aligned_cols=156 Identities=26% Similarity=0.403 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC----CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED----HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS 79 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (454)
..-++.|+++|+.|||++||.|||+|.+|||+..+. .+.|+|||.+-.-.. .+. . ++ +.
T Consensus 343 ~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~--hGl-----q---lp-------y~ 405 (598)
T KOG4158|consen 343 GRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN--HGL-----Q---LP-------YE 405 (598)
T ss_pred HHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccc--ccc-----c---cc-------cc
Confidence 345789999999999999999999999999995443 578999998752110 000 0 00 00
Q ss_pred CCCCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309 80 HDTSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE 157 (454)
Q Consensus 80 ~~~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~ 157 (454)
+ ..-..-|+..-||||+.... .....++ .++|.|+. |.+.||+++..-
T Consensus 406 S--~~Vd~GGNa~lmAPEi~ta~PGp~avvny-~kAD~WA~--------------GalaYEIfg~~N------------- 455 (598)
T KOG4158|consen 406 S--DEVDLGGNAKLMAPEIATAVPGPNAVVNY-EKADTWAA--------------GALAYEIFGRSN------------- 455 (598)
T ss_pred c--ccccCCCcceecchhhhhcCCCCceeecc-chhhhhhh--------------hhhHHHHhccCC-------------
Confidence 0 11223467778999997521 1112222 23499999 999999776332
Q ss_pred CCCCCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChh
Q psy7309 158 NGPSTGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSE 226 (454)
Q Consensus 158 ~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~ 226 (454)
||.+.... -....+....-+.+|+.+ .+.+.+++ ..+|+.||+||+|+.
T Consensus 456 --PFY~rGem~L~~r~Yqe~qLPalp~~v-------------pp~~rqlV-----~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 456 --PFYKRGEMLLDTRTYQESQLPALPSRV-------------PPVARQLV-----FDLLKRDPSKRVSPN 505 (598)
T ss_pred --cccccchheechhhhhhhhCCCCcccC-------------ChHHHHHH-----HHHhcCCccccCCcc
Confidence 22220000 000112223334444443 37778898 999999999999965
No 447
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.44 E-value=9.9e-14 Score=134.23 Aligned_cols=174 Identities=29% Similarity=0.353 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD 81 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (454)
.+..++.|++.++.|+|+.|++|||+||+||+++..+ .++++|||.+........ ...
T Consensus 102 ~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~---------------------~~~ 160 (384)
T COG0515 102 EALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS---------------------TSS 160 (384)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc---------------------ccc
Confidence 5788999999999999999999999999999999988 699999999974422100 000
Q ss_pred --CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309 82 --TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG 159 (454)
Q Consensus 82 --~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~ 159 (454)
......+||..|+|||.+.......+.... |+||+ |+++++++.+..+
T Consensus 161 ~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~--D~~s~--------------g~~~~~~~~~~~p-------------- 210 (384)
T COG0515 161 IPALPSTSVGTPGYMAPEVLLGLSLAYASSSS--DIWSL--------------GITLYELLTGLPP-------------- 210 (384)
T ss_pred ccccccccccccccCCHHHhcCCCCCCCCchH--hHHHH--------------HHHHHHHHhCCCC--------------
Confidence 245678999999999998710004667777 99999 8777774443321
Q ss_pred CCCCch----hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 160 PSTGSN----VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 160 p~~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
+.... .......+.............. ... ........+++ ..++..+|..|.+..+...+++..
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~-----~~~~~~~~~~r~~~~~~~~~~~~~ 279 (384)
T COG0515 211 -FEGEKNSSATSQTLKIILELPTPSLASPLSP-SNP----ELISKAASDLL-----KKLLAKDPKNRLSSSSDLSHDLLA 279 (384)
T ss_pred -CCCCCccccHHHHHHHHHhcCCcccccccCc-ccc----chhhHHHHHHH-----HHHHhcCchhcCCHHHHhhchHhh
Confidence 11110 1111111111111101111000 000 00113455666 999999999999999988886655
Q ss_pred cCC
Q psy7309 236 EGS 238 (454)
Q Consensus 236 ~~~ 238 (454)
...
T Consensus 280 ~~~ 282 (384)
T COG0515 280 HLK 282 (384)
T ss_pred Ccc
Confidence 433
No 448
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ.
Probab=99.43 E-value=9.9e-13 Score=122.35 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCcccccccccc---ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeEee
Q psy7309 315 LESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT---SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRYCI 391 (454)
Q Consensus 315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~---~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~y~ 391 (454)
++++++.++++|..+||.+|.||.|++.+.+... .+.+..+.+.+++..+|||++|.++++.++.|....|.|+|++
T Consensus 2 ~~~~~~~~r~~l~~~Gf~Ev~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LR~s~~~~l~~~~~~n~~~~~~~lfei 81 (211)
T cd00768 2 RSKIEQKLRRFMAELGFQEVETPIVEREPLLEKAGHEPKDLLPVGAENEEDLYLRPTLEPGLVRLFVSHIRKLPLRLAEI 81 (211)
T ss_pred HHHHHHHHHHHHHHcCCEEeEcceecHHHHHHHcCccHhheeeeecCCCCEEEECCCCcHHHHHHHHhhcccCCEEEEEE
Confidence 6789999999999999999999999998665322 1235555577899999999999999999887643579999999
Q ss_pred cCccccCCCCC--CccceEEEEEEEEEcCCCC-cccHHHHHHHHHHHHHhCCC-CCcEE
Q psy7309 392 DRVFRERRVLG--FHPRELYECAFDIVTNTPG-VLTMGSLRRCLMGSFRRFNY-GNISF 446 (454)
Q Consensus 392 g~vfR~~~~~~--g~~rE~~Q~g~eiig~~~~-~~~d~e~~~~~~~~l~~~~~-~~~~i 446 (454)
|+|||.+.... +|.+||.|.+++++|.... .....++..++.++++.+|+ .++.+
T Consensus 82 g~vfr~e~~~~~~~~~~ef~~l~~~~~g~~~~~~~~~~~~~~~~~~~l~~lg~~~~~~~ 140 (211)
T cd00768 82 GPAFRNEGGRRGLRRVREFTQLEGEVFGEDGEEASEFEELIELTEELLRALGIKLDIVF 140 (211)
T ss_pred cceeecCCCccccccceeEEEcCEEEEcCCchhHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 99999865433 5679999999999997621 12578899999999999997 24444
No 449
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.38 E-value=4.9e-14 Score=136.25 Aligned_cols=93 Identities=25% Similarity=0.364 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCCC
Q psy7309 5 WRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTSH 84 (454)
Q Consensus 5 ~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (454)
..+..|++..+++||+.|++|+||||+|++++.+|.+.|+||+....... ..
T Consensus 148 l~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~----------------------------~~ 199 (288)
T PF14531_consen 148 LSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT----------------------------RY 199 (288)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE----------------------------EE
T ss_pred HHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCc----------------------------ee
Confidence 34568999999999999999999999999999999999999997764321 11
Q ss_pred cCcccccceecccccccc-----ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC
Q psy7309 85 TGQVGTALYAAPELDSHG-----VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK 141 (454)
Q Consensus 85 ~~~~gT~~Y~aPE~~~~~-----~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~ 141 (454)
.....+..|.+||+.... ....++.+. |.|+| |+++|.++.
T Consensus 200 ~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~--DaW~L--------------G~~ly~lWC 245 (288)
T PF14531_consen 200 RCSEFPVAFTPPELESCAGQFGQNNAPYTFAT--DAWQL--------------GITLYSLWC 245 (288)
T ss_dssp EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHH--HHHHH--------------HHHHHHHHH
T ss_pred eccCCCcccCChhhhhhhcccCcccceeeecc--CHHHH--------------HHHHHHHHH
Confidence 112345778999986521 235678888 99999 777777544
No 450
>KOG1240|consensus
Probab=99.38 E-value=1.6e-13 Score=148.00 Aligned_cols=160 Identities=26% Similarity=0.310 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
-+-|+.|++.||+-+|..||+|+|||.+|||++.=+.+.|+||..-+... +|+..++.. ....
T Consensus 122 KkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY---------------LPeDNPadf--~fFF 184 (1431)
T KOG1240|consen 122 KKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTY---------------LPEDNPADF--TFFF 184 (1431)
T ss_pred HHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCcc---------------CCCCCcccc--eEEE
Confidence 35589999999999999999999999999999999999999998766432 111111100 1112
Q ss_pred CcCcccccceeccccccccc--------cccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-Cch-hhHHHHHHH
Q psy7309 84 HTGQVGTALYAAPELDSHGV--------KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRP-KTLEELKHN 153 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~--------~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~-~~~~~l~~~ 153 (454)
.|+... ..|.|||-+.... ....+.+- ||+|+ ||+++|++. |+| +++.+|..-
T Consensus 185 DTSrRR-tCYiAPERFv~~~~~~~~~q~~~~L~paM--DIFS~--------------GCViaELf~Eg~PlF~LSQL~aY 247 (1431)
T KOG1240|consen 185 DTSRRR-TCYIAPERFVSALGKTSVGQDAPLLTPAM--DIFSA--------------GCVIAELFLEGRPLFTLSQLLAY 247 (1431)
T ss_pred ecCCce-eeecChHhhhccccccccCCcccccChhh--hhhhh--------------hHHHHHHHhcCCCcccHHHHHhH
Confidence 222222 3799999875211 11145566 99999 999999554 565 566665222
Q ss_pred hhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309 154 IRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ 231 (454)
Q Consensus 154 i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h 231 (454)
-+ +. ...++ .+..+..+.....+| ..|++.||.+|.+|++.|+.
T Consensus 248 r~--------------------~~-~~~~e--------~~Le~Ied~~~Rnli-----l~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 248 RS--------------------GN-ADDPE--------QLLEKIEDVSLRNLI-----LSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hc--------------------cC-ccCHH--------HHHHhCcCccHHHHH-----HHHHccCchhccCHHHHHHh
Confidence 11 11 11111 111123345677888 99999999999999999974
No 451
>cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from archaea, the cytoplasm of eukaryotes and some bacteria.
Probab=99.38 E-value=5.9e-13 Score=128.52 Aligned_cols=156 Identities=14% Similarity=0.104 Sum_probs=117.3
Q ss_pred ChhHHHHHHH--HhCC-CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccc-c------
Q psy7309 279 SKGYKYLVAA--CFNQ-KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA-T------ 348 (454)
Q Consensus 279 s~~~~~~~~~--~f~q-~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~-~------ 348 (454)
+..|.+++.. +++. +.+++.+++ |....+++.|++.+++.++++||.+|.||.|++.+++.. +
T Consensus 3 ~~w~~~l~~~~~~~d~~~~~G~~~~l-------P~g~~l~~~l~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~sg~~~~f 75 (261)
T cd00778 3 SEWYTEVITKAELIDYGPVKGCMVFR-------PYGYAIWENIQKILDKEIKETGHENVYFPLLIPESELEKEKEHIEGF 75 (261)
T ss_pred HHHHHHHHHHhCCcccCCCCCeEEEc-------ccHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhhhcchhhc
Confidence 3456666554 2222 333444444 788889999999999999999999999999999998742 2
Q ss_pred ccccEEEEcCCCC----eEeeCCC----CCHHHHHHHHHcCCCCceeeEeecCccccCCCC---CCccceEEEEEE-EEE
Q psy7309 349 SETTASVMTRGGS----IVTLPHD----LRIPFARYLAQNGSIVSMKRYCIDRVFRERRVL---GFHPRELYECAF-DIV 416 (454)
Q Consensus 349 ~~~~~~~~d~~G~----~~~Lr~d----~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~---~g~~rE~~Q~g~-eii 416 (454)
.+++|++.|.+|+ .++|||+ +|..+++.+.... .+|+|+|++|+|||++..+ -+|.|||.+.+. -++
T Consensus 76 ~~~~f~~~~~~~~~~~~~~~L~Pt~e~~~~~~~~~~i~s~r-~LPlr~~~~~~~fR~E~~~~~Gl~R~reF~~~d~h~~~ 154 (261)
T cd00778 76 APEVAWVTHGGLEELEEPLALRPTSETAIYPMFSKWIRSYR-DLPLKINQWVNVFRWETKTTRPFLRTREFLWQEGHTAH 154 (261)
T ss_pred CcceEEEEecCCcccCCcEEEcCCCCHHHHHHHHhhccchh-hcCHHHHhhhhhccCCCCCCCceeEeeeeeeeceeecc
Confidence 3689999987764 7999999 8888888776554 5899999999999998755 358999999888 344
Q ss_pred cCCC-CcccHHHHHHHHHHHHHhC-CCC
Q psy7309 417 TNTP-GVLTMGSLRRCLMGSFRRF-NYG 442 (454)
Q Consensus 417 g~~~-~~~~d~e~~~~~~~~l~~~-~~~ 442 (454)
.... ....-.+++.+..++++.+ |+.
T Consensus 155 ~~~e~~~~~~~~~~~~~~~i~~~llgl~ 182 (261)
T cd00778 155 ATEEEAEEEVLQILDLYKEFYEDLLAIP 182 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 4321 2233445777888999998 984
No 452
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.35 E-value=6.5e-13 Score=133.51 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcccCC-CCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 5 WRLLREIIEGLSHIHSQGIIHRDL-KPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 5 ~~i~~qil~gL~~LH~~giiHrDL-Kp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
..++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+.+..... .........
T Consensus 114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~-----------------~~~~~~~~d 176 (365)
T PRK09188 114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGA-----------------LYRIAAYED 176 (365)
T ss_pred HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcc-----------------hhhhhhhhh
Confidence 468999999999999999999999 99999999999999999999986532100 000011223
Q ss_pred CcCcccccceecccccc
Q psy7309 84 HTGQVGTALYAAPELDS 100 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~ 100 (454)
.++..+++.|+|||.+.
T Consensus 177 ~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 177 LRHLLKHKRTYAPDALT 193 (365)
T ss_pred hhhhhccCccCCcccCC
Confidence 35778999999999986
No 453
>KOG1164|consensus
Probab=99.26 E-value=2.8e-12 Score=127.89 Aligned_cols=95 Identities=24% Similarity=0.335 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-----CeEEecccchh--hhhhhcCCCccccccCccCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-----HVKIGDFGLAT--NILQKHAGPLARELTGYILPPIDS 74 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-----~vKL~DFGla~--~~~~~~~~~~~~~~~~~~~~~~~~ 74 (454)
..+.+++.|++.+|++||+.|++||||||+|+++.... .+.|.|||+|+ .+....... ..
T Consensus 122 ~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~--------~~----- 188 (322)
T KOG1164|consen 122 KTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGN--------LR----- 188 (322)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcc--------cc-----
Confidence 35789999999999999999999999999999998763 58999999998 332111000 00
Q ss_pred CCcccCCCCCcCcccccceeccccccccccccccccCCccccch
Q psy7309 75 TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSK 118 (454)
Q Consensus 75 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl 118 (454)
..........||..|+++.+.. +...+... |+||+
T Consensus 189 ----~~r~~~~~~rGT~ry~S~~~H~---~~e~~r~D--Dles~ 223 (322)
T KOG1164|consen 189 ----PPRPQKGLFRGTLRYASINVHL---GIEQGRRD--DLESL 223 (322)
T ss_pred ----cCCCCccCCCCccccccHHHhC---CCccCCch--hhhhH
Confidence 0111124567999999999987 67777788 99998
No 454
>TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent families. This family includes the archaeal enzyme, the Pro-specific domain of a human multifunctional tRNA ligase, and the enzyme from the spirochete Borrelia burgdorferi. The other family includes enzymes from Escherichia coli, Bacillus subtilis, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae.
Probab=99.25 E-value=9.5e-12 Score=129.64 Aligned_cols=157 Identities=13% Similarity=0.054 Sum_probs=119.6
Q ss_pred CChhHHHHHHH--HhCC-CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------
Q psy7309 278 QSKGYKYLVAA--CFNQ-KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------ 348 (454)
Q Consensus 278 ~s~~~~~~~~~--~f~q-~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------ 348 (454)
-+..|++++.. +.+. +.+++.+++ |..+.+++.|.+.+.+.|+++||.+|.+|+|++.+.+...
T Consensus 8 f~~wy~~l~~~~~li~~~~~~G~~~~l-------P~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~ 80 (472)
T TIGR00408 8 FSEWYHQILEKAEIIDYYPVKGCYVWL-------PYGFKIWKNIQKILRNILDEIGHEEVYFPMLIPESELAKEKDHIKG 80 (472)
T ss_pred HHHHHHHHHHHcCCccccCCCceEEEC-------cCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhhcchhhh
Confidence 45667776643 2222 445555555 8888899999999999999999999999999999987642
Q ss_pred -ccccEEEEcCC----CCeEeeCCCCCHHHHHHHHHcC---CCCceeeEeecCccccCCCC---CCccceEEEEEEEEEc
Q psy7309 349 -SETTASVMTRG----GSIVTLPHDLRIPFARYLAQNG---SIVSMKRYCIDRVFRERRVL---GFHPRELYECAFDIVT 417 (454)
Q Consensus 349 -~~~~~~~~d~~----G~~~~Lr~d~T~p~aR~~a~~~---~~~~~k~~y~g~vfR~~~~~---~g~~rE~~Q~g~eiig 417 (454)
.+++|.+.|.+ ++.++|||+.+.+++.++++.. ..+|+|+|++|+|||++..+ -+|.|||+|-+.-.+=
T Consensus 81 f~~e~f~v~~~g~~~~~e~l~LrPt~e~~i~~~~~~~i~S~rdLPlr~~q~~~vfR~E~~~~~gl~R~rEF~~~e~h~~~ 160 (472)
T TIGR00408 81 FEPEVYWITHGGLSKLDEPLALRPTSETAMYPMFKKWVKSYTDLPLKINQWVNVFRYETKHTRPFLRTREFTWQEAHTAH 160 (472)
T ss_pred cchhcEEEecCCCCccCCcEEEeCCCcHHHHHHHhccccChhhcCHHHhheeeeecCCCCCCCCcceeeeeehhhhhhhh
Confidence 36899999987 4899999999999997766431 15899999999999997753 3689999999886322
Q ss_pred CCCCcccH---HHHHHHHHHHHH-hCCCC
Q psy7309 418 NTPGVLTM---GSLRRCLMGSFR-RFNYG 442 (454)
Q Consensus 418 ~~~~~~~d---~e~~~~~~~~l~-~~~~~ 442 (454)
.+ ...+. .+++.+..++++ .||+.
T Consensus 161 ~~-~e~a~~e~~~~l~~y~~i~~~~lglp 188 (472)
T TIGR00408 161 AT-AEEAEEQVLRALDIYKEFIENSLAIP 188 (472)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHhccCCe
Confidence 22 22233 346677888887 88884
No 455
>PRK08661 prolyl-tRNA synthetase; Provisional
Probab=99.24 E-value=2.4e-11 Score=126.88 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=108.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccc-c------ccccEEEEcCC----CCeEeeCCCC----CHHH
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA-T------SETTASVMTRG----GSIVTLPHDL----RIPF 373 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~-~------~~~~~~~~d~~----G~~~~Lr~d~----T~p~ 373 (454)
|..+.+++.|++.+.+.|+++||.+|.+|+|.+.+++.. + .+++|.+.+.+ ++.++|||+. |.++
T Consensus 41 P~g~~i~~~i~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~~~v~~~~~~~~~e~l~LrPtsE~~i~~~~ 120 (477)
T PRK08661 41 PYGYAIWENIQKILDKLFKETGHENVYFPLLIPESLLEKEKEHVEGFAPEVAWVTHGGGEKLEEKLALRPTSETIIYPMY 120 (477)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhhcCchhhcccccEEEEccCCCccCceEEEecCCcHHHHHHH
Confidence 888899999999999999999999999999999999743 2 36899999877 5689999999 8888
Q ss_pred HHHHHHcCCCCceeeEeecCccccCCCCC--CccceEEEEEEEEEcCCCCcccH---HHHHHHHHHHH-HhCCCC
Q psy7309 374 ARYLAQNGSIVSMKRYCIDRVFRERRVLG--FHPRELYECAFDIVTNTPGVLTM---GSLRRCLMGSF-RRFNYG 442 (454)
Q Consensus 374 aR~~a~~~~~~~~k~~y~g~vfR~~~~~~--g~~rE~~Q~g~eiig~~~~~~~d---~e~~~~~~~~l-~~~~~~ 442 (454)
+|.+.... .+|+|+|++|+|||++...+ +|.|||+|-..-++=.+ ...++ .+++.+..+++ +.||+.
T Consensus 121 ~~~i~Syr-dLPlrl~q~~~vfR~E~~~rgl~R~rEF~~~E~h~~~~~-~eea~~e~~~~l~~y~~i~~~~Lglp 193 (477)
T PRK08661 121 KKWIQSYR-DLPLLYNQWVNVVRWETKTRPFLRTREFLWQEGHTAHAT-EEEAEEETLEMLEIYKEFFEDYLAIP 193 (477)
T ss_pred Hhhhcchh-hcCHHHhcccceeeCCCCCCCcceeeeEEEcceeeeeCC-HHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 88887654 69999999999999987665 68999999888654333 23333 44667777888 888874
No 456
>KOG0590|consensus
Probab=99.17 E-value=1.1e-11 Score=132.54 Aligned_cols=164 Identities=27% Similarity=0.333 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 3 RAWRLLREIIEGLSHIH-SQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH-~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
.+.+++.|+..|+.|+| ..++.|||+||+|.+++.++ .+|++|||+|..+.... ..
T Consensus 124 ~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~----------------------g~ 181 (601)
T KOG0590|consen 124 SASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN----------------------GA 181 (601)
T ss_pred chhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccC----------------------Cc
Confidence 46789999999999999 99999999999999999999 99999999998664310 12
Q ss_pred CCCCcCccc-ccceecccccccccc-ccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309 81 DTSHTGQVG-TALYAAPELDSHGVK-AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN 158 (454)
Q Consensus 81 ~~~~~~~~g-T~~Y~aPE~~~~~~~-~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~ 158 (454)
.......+| ++.|+|||... + ....... |+||. |+++.-+.++..+.....
T Consensus 182 ~~~~~~~~g~s~~y~a~E~~~---~~~~~~~~~--d~~S~--------------g~~l~~~~~g~~p~~~~~-------- 234 (601)
T KOG0590|consen 182 ERSLKDRCGSSPPYGAPEHLS---GKAYRGPSV--DVWSL--------------GIVLSAMLTGELPWDFPS-------- 234 (601)
T ss_pred ceeeecccCCCCCCCCccccc---chhhcCCCc--ccccc--------------cccccccccCCCCccccc--------
Confidence 233445677 99999999988 3 3445667 99999 999998776543211110
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE 236 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~ 236 (454)
... .....+.... ..... -.|+. .+....+++ ..+|..+|..|.+.+++..+||+..
T Consensus 235 ---~~~---~~~~~~~~~~--~~~~~---~~~~~-----~~~~~~~~l-----~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 235 ---RKD---GRYSSWKSNK--GRFTQ---LPWNS-----ISDQAHDLL-----HKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ---ccc---ccceeecccc--ccccc---Ccccc-----CChhhhhcc-----cccccCCchhccccccccccccccc
Confidence 000 0000000000 00000 12332 236667788 9999999999999999999999988
No 457
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.15 E-value=3.4e-11 Score=110.83 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHHHHHHH-HHcCCcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309 2 GRAWRLLREIIEGLSHI-HSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~L-H~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~ 52 (454)
+.+..++.|++.+|.++ |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 117 ~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 117 SKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 35789999999999999 799999999999999998 578999999999743
No 458
>KOG1163|consensus
Probab=99.13 E-value=8.7e-11 Score=108.25 Aligned_cols=104 Identities=22% Similarity=0.276 Sum_probs=80.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY 78 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
..+.-++-|++.-++|+|.+++|||||||+|+|+.-+- .+-++|||+|+.+.+.. +..+
T Consensus 111 kTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~------------------t~~H 172 (341)
T KOG1163|consen 111 KTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR------------------TRQH 172 (341)
T ss_pred HhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc------------------cccc
Confidence 45778899999999999999999999999999997653 58899999999764321 1122
Q ss_pred cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC
Q psy7309 79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD 142 (454)
Q Consensus 79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~ 142 (454)
-.....+...||..|.+-.... +...+... |+=|+ |.++..+..|
T Consensus 173 Ipyre~r~ltGTaRYASinAh~---g~eqSRRD--DmeSv--------------gYvLmYfnrG 217 (341)
T KOG1163|consen 173 IPYREDRNLTGTARYASINAHL---GIEQSRRD--DMESV--------------GYVLMYFNRG 217 (341)
T ss_pred CccccCCccceeeeehhhhhhh---hhhhhhhh--hhhhh--------------cceeeeeecC
Confidence 3455667789999999987766 45556667 99999 8877765443
No 459
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.10 E-value=7.5e-11 Score=108.50 Aligned_cols=50 Identities=24% Similarity=0.399 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~ 52 (454)
+++.+++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+|+..
T Consensus 117 ~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 117 EEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceec
Confidence 3678899999999999999 9999999999999999 889999999999854
No 460
>KOG1165|consensus
Probab=99.08 E-value=1.5e-10 Score=111.14 Aligned_cols=105 Identities=20% Similarity=0.241 Sum_probs=84.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-----CeEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-----HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA 76 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (454)
..+..++.|++.-++|+|++.+|.|||||+|+||...+ .+.|+|||+|+.+.+.. +.
T Consensus 124 KTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~------------------Tk 185 (449)
T KOG1165|consen 124 KTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK------------------TK 185 (449)
T ss_pred HhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc------------------cc
Confidence 45778999999999999999999999999999998655 48999999999774311 12
Q ss_pred cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCc
Q psy7309 77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDR 143 (454)
Q Consensus 77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~ 143 (454)
-+-....+.+..||..||+-...+ +...+... |+=|| |-+++.++.|.
T Consensus 186 qHIPYrE~KSLsGTARYMSINTHl---GrEQSRRD--DLEaL--------------GHvFmYFLRGs 233 (449)
T KOG1165|consen 186 QHIPYREHKSLSGTARYMSINTHL---GREQSRRD--DLEAL--------------GHVFMYFLRGS 233 (449)
T ss_pred ccCccccccccccceeeeEeeccc---cchhhhhh--hHHHh--------------hhhhhhhccCC
Confidence 224466778899999999988877 66677778 99999 77777755433
No 461
>PRK09350 poxB regulator PoxA; Provisional
Probab=99.06 E-value=2.1e-10 Score=113.13 Aligned_cols=115 Identities=19% Similarity=0.157 Sum_probs=88.7
Q ss_pred hhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccc---cccEEEEc-CCCCeEeeC--CCCCHHHHHHHHHcCCCC
Q psy7309 311 NFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATS---ETTASVMT-RGGSIVTLP--HDLRIPFARYLAQNGSIV 384 (454)
Q Consensus 311 ~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~---~~~~~~~d-~~G~~~~Lr--~d~T~p~aR~~a~~~~~~ 384 (454)
.+.+|..|.+.+++.|..+||.+|.||+|+.++...... ..-|.+.| ..|+.+.|| |++| ++|.+|...
T Consensus 4 ~l~~r~~i~~~ir~~f~~~gf~EV~TP~l~~~~~~~~~~~~f~~~y~~~~~~~~~~~~L~~SPe~~--~kr~la~~~--- 78 (306)
T PRK09350 4 NLLKRAKIIAEIRRFFADRGVLEVETPILSQATVTDIHLVPFETRFVGPGASQGKTLWLMTSPEYH--MKRLLAAGS--- 78 (306)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCeEecccCCCccCCceeeeeccccccCCcceEEecCHHHH--HHHHhhccc---
Confidence 456899999999999999999999999998876543211 11144445 679999999 9999 788777432
Q ss_pred ceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHH
Q psy7309 385 SMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSF 436 (454)
Q Consensus 385 ~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l 436 (454)
-|.||+|+|||.+....+|..||+|..++..+.+ -.+++.++-+.+
T Consensus 79 -~rvf~i~~~FR~e~~~~~H~~EFt~lE~y~~~~d-----~~dlm~~~E~li 124 (306)
T PRK09350 79 -GPIFQICKSFRNEEAGRYHNPEFTMLEWYRPHYD-----MYRLMNEVDDLL 124 (306)
T ss_pred -cceEEecceeecCCCCCCCCcHHHhhhhhhhCCC-----HHHHHHHHHHHH
Confidence 3999999999998888899999999999988754 344555554444
No 462
>cd00770 SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain. SerRS is responsible for the attachment of serine to the 3' OH group of ribose of the appropriate tRNA. This domain It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. SerRS synthetase is a homodimer.
Probab=99.04 E-value=1.2e-09 Score=107.56 Aligned_cols=138 Identities=11% Similarity=-0.001 Sum_probs=110.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcC-
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNG- 381 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~- 381 (454)
|.-..+++.|++-+.+.+.++||.+|.||.|.+.+++... .+++|++.| +.++|+|.-..+++.+++..-
T Consensus 49 p~g~~l~~~l~~~~~~~~~~~G~~ev~~P~l~~~~l~~~sg~~~~~~~~~f~v~~---~~~~L~pt~e~~~~~l~~~~~~ 125 (297)
T cd00770 49 GDGALLERALINFALDFLTKRGFTPVIPPFLVRKEVMEGTGQLPKFDEQLYKVEG---EDLYLIATAEVPLAALHRDEIL 125 (297)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCEEEECcccccHHHHhhcCcCccChhcccEecC---CCEEEeecCCHHHHHHHhcccC
Confidence 6677799999999999999999999999999999997543 257999865 679999999999999887531
Q ss_pred C--CCceeeEeecCccccCCCC-----CC--ccceEEEEEEEEEcCCC-CcccHHHHHHHHHHHHHhCCCCCcEEEcC
Q psy7309 382 S--IVSMKRYCIDRVFRERRVL-----GF--HPRELYECAFDIVTNTP-GVLTMGSLRRCLMGSFRRFNYGNISFAPH 449 (454)
Q Consensus 382 ~--~~~~k~~y~g~vfR~~~~~-----~g--~~rE~~Q~g~eiig~~~-~~~~d~e~~~~~~~~l~~~~~~~~~i~i~ 449 (454)
+ .+|+|+|++|+|||.+... .| |.|||.|...-++..+. +...-.+++.++.++++.||+.-..++..
T Consensus 126 s~~~LPlr~~~~~~~fR~E~~~~g~~~~GL~R~reF~~~e~~~f~~~e~~~~~~~~~l~~~~~i~~~lgl~~~~~~~~ 203 (297)
T cd00770 126 EEEELPLKYAGYSPCFRKEAGSAGRDTRGLFRVHQFEKVEQFVFTKPEESWEELEELISNAEEILQELGLPYRVVNIC 203 (297)
T ss_pred CHhhCCchheecChhHhCccccCCCCCCCceEEEeeeeeeEEEEECchHHHHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 1 4899999999999987542 34 67899888887776542 33456668889999999999965555443
No 463
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.02 E-value=3.1e-10 Score=104.87 Aligned_cols=48 Identities=27% Similarity=0.374 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHcCCcccCC-CCCcEEEccCCCeEEecccchhhh
Q psy7309 5 WRLLREIIEGLSHIHSQGIIHRDL-KPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 5 ~~i~~qil~gL~~LH~~giiHrDL-Kp~NILl~~~~~vKL~DFGla~~~ 52 (454)
..++.|++.+|+++|++||+|||| ||+|||++.++.++|+|||+|...
T Consensus 94 ~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~ 142 (218)
T PRK12274 94 LAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRG 142 (218)
T ss_pred HHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceec
Confidence 457899999999999999999999 799999999999999999999843
No 464
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.01 E-value=2e-10 Score=108.08 Aligned_cols=46 Identities=15% Similarity=0.273 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309 6 RLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 6 ~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~ 52 (454)
....+++.+|..+|+.|++|||+||+||+++.+| ++|+|||.+...
T Consensus 139 ~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~ 184 (232)
T PRK10359 139 DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCT 184 (232)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccc
Confidence 3567999999999999999999999999999888 999999987643
No 465
>cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain. This domain is the core catalytic domain of class II aminoacyl-tRNA synthetases of the subgroup containing aspartyl, lysyl, and asparaginyl tRNA synthetases. It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. Nearly all class II tRNA synthetases are dimers and enzymes in this subgroup are homodimers. These enzymes attach a specific amino acid to the 3' OH group of ribose of the appropriate tRNA.
Probab=98.96 E-value=3.1e-09 Score=102.83 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEc-CCCCeEeeC--CCCCHHHHHHHHHcCCCCceeeE
Q psy7309 313 SLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMT-RGGSIVTLP--HDLRIPFARYLAQNGSIVSMKRY 389 (454)
Q Consensus 313 ~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d-~~G~~~~Lr--~d~T~p~aR~~a~~~~~~~~k~~ 389 (454)
.+|..|.+.+++.|.++||.+|+||+|+.... ....+.|.+.. ..|+.+.|+ |+++ ..|.++.+. -|+|
T Consensus 2 ~~rs~i~~~ir~~f~~~gf~ev~tP~l~~~~~--~~~~~~f~~~~~~~g~~~~L~~Spql~--~~~~~~~~~----~~vf 73 (269)
T cd00669 2 KVRSKIIKAIRDFMDDRGFLEVETPMLQKITG--GAGARPFLVKYNALGLDYYLRISPQLF--KKRLMVGGL----DRVF 73 (269)
T ss_pred cHHHHHHHHHHHHHHHCCCEEEECCEEeccCC--ccccceEEeeecCCCCcEEeecCHHHH--HHHHHhcCC----CcEE
Confidence 36889999999999999999999999996643 22235677632 368999999 8887 555565432 2999
Q ss_pred eecCccccCCCCCCccceEEEEEEEEEcCC
Q psy7309 390 CIDRVFRERRVLGFHPRELYECAFDIVTNT 419 (454)
Q Consensus 390 y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~ 419 (454)
++|+|||.+....+|.+||+|+++|....+
T Consensus 74 ~i~~~fR~e~~~~~hl~EF~~le~e~~~~~ 103 (269)
T cd00669 74 EINRNFRNEDLRARHQPEFTMMDLEMAFAD 103 (269)
T ss_pred EEecceeCCCCCCCcccceeEEEEEEecCC
Confidence 999999999888999999999999988653
No 466
>KOG1023|consensus
Probab=98.91 E-value=8.6e-10 Score=113.56 Aligned_cols=163 Identities=25% Similarity=0.340 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHcCC-cccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309 5 WRLLREIIEGLSHIHSQGI-IHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS 83 (454)
Q Consensus 5 ~~i~~qil~gL~~LH~~gi-iHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (454)
..++++|+.||+|||..-| .|.-|+..|++++....+||.|||+....... .....
T Consensus 51 ~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~-----------------------~~~~~ 107 (484)
T KOG1023|consen 51 LSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEET-----------------------AEPEA 107 (484)
T ss_pred HHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhccccccc-----------------------ccccc
Confidence 3578999999999997654 99999999999999999999999998644210 11122
Q ss_pred CcCcccccceecccccccccccc----ccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcC
Q psy7309 84 HTGQVGTALYAAPELDSHGVKAM----YNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRREN 158 (454)
Q Consensus 84 ~~~~~gT~~Y~aPE~~~~~~~~~----~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~ 158 (454)
.....-...|.|||++....... -+.+. |+||+ |++++|++. ..+......
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~g--diYs~--------------~ii~~ei~~r~~~~~~~~~-------- 163 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKG--DIYSF--------------GIIMYEILFRSGPFDLRNL-------- 163 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccC--CeehH--------------HHHHHHHHhccCccccccc--------
Confidence 22233456799999987321122 34456 99999 999999544 222111000
Q ss_pred CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309 159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC 230 (454)
Q Consensus 159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~ 230 (454)
.... .+...++.+.....+.+... .. ....++...++ +.||..+|.+||+++++-.
T Consensus 164 ---~~~~-~eii~~~~~~~~~~~rP~i~----~~---~e~~~~l~~l~-----~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 164 ---VEDP-DEIILRVKKGGSNPFRPSIE----LL---NELPPELLLLV-----ARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ---cCCh-HHHHHHHHhcCCCCcCcchh----hh---hhcchHHHHHH-----HHhcccChhhCccHHHHHh
Confidence 0011 22333333322222222211 00 01113344555 9999999999999997653
No 467
>KOG1166|consensus
Probab=98.91 E-value=9.1e-10 Score=121.01 Aligned_cols=99 Identities=21% Similarity=0.368 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-------CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCC
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-------EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDST 75 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (454)
-+..+..|++.-+++||.++|||+||||+|+||.. ...++|+|||.|..+.-
T Consensus 795 lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l--------------------- 853 (974)
T KOG1166|consen 795 LVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL--------------------- 853 (974)
T ss_pred hhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeE---------------------
Confidence 36788999999999999999999999999999953 23589999998864321
Q ss_pred CcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcce
Q psy7309 76 AFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGY 134 (454)
Q Consensus 76 ~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~ 134 (454)
...+......++|-.+-.+|+.. +..|++.+ |.|.+ +.++.+||+|-
T Consensus 854 --fp~~~~F~~~~~td~f~C~EM~~---grpWtYq~--DyfGl-----Aa~~h~mLFG~ 900 (974)
T KOG1166|consen 854 --FPDGTKFKAVWHTDLFDCIEMRE---GRPWTYQI--DYFGL-----AATVHVMLFGK 900 (974)
T ss_pred --cCCCcEEeeeeccccchhHHHhc---CCCCchhh--hhHHH-----HHHHHHHHHHH
Confidence 02345666788999999999998 89999999 99998 56666666663
No 468
>smart00090 RIO RIO-like kinase.
Probab=98.88 E-value=1.9e-09 Score=102.76 Aligned_cols=49 Identities=24% Similarity=0.525 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHHHHHcC-CcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309 3 RAWRLLREIIEGLSHIHSQG-IIHRDLKPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~g-iiHrDLKp~NILl~~~~~vKL~DFGla~~~ 52 (454)
++..++.|++.+|++||++| |+||||||+||+++ ++.++|+|||.|...
T Consensus 149 ~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 149 EEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 35789999999999999999 99999999999999 889999999998754
No 469
>KOG0606|consensus
Probab=98.84 E-value=4.4e-09 Score=114.18 Aligned_cols=199 Identities=23% Similarity=0.272 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcC-CC---ccccccCccCCCCCCCCcc-
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHA-GP---LARELTGYILPPIDSTAFY- 78 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~- 78 (454)
++..+..+..++++||...++|||+||.|++...+++.++.|||+......-.. .. ....+..+.... ..+...
T Consensus 906 aRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~-~~~~~~l 984 (1205)
T KOG0606|consen 906 ARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSR-SERRPQL 984 (1205)
T ss_pred ccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccc-ccccccc
Confidence 345667788999999999999999999999999999999999996553321110 00 011111111110 001100
Q ss_pred c--CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309 79 S--HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR 156 (454)
Q Consensus 79 ~--~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~ 156 (454)
. ........+||+-|.+||... +......+ |+|+. |++++|.+.|.+
T Consensus 985 ~~~~~~~~~~~~~t~~~laPe~~l---g~~hgs~a--d~~~~--------------g~~l~e~l~g~p------------ 1033 (1205)
T KOG0606|consen 985 SADEARRKHAVVGTPDYLAPEILL---GRRHGSAA--DWWSS--------------GVCLFEVLTGIP------------ 1033 (1205)
T ss_pred ccchhhccccccCCCcccCCcccc---cccCCCcc--hhhhh--------------hhhhhhhhcCCC------------
Confidence 1 113355679999999999998 56666677 99999 999999655443
Q ss_pred cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChh---hhhcCcc
Q psy7309 157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSE---QNLCQPI 233 (454)
Q Consensus 157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~---e~l~hp~ 233 (454)
|+.....++.+..+.+ .....|... ...+..+.+++ ..+|..+|.+|.+|. +.-.|+|
T Consensus 1034 ---p~na~tpq~~f~ni~~-~~~~~p~g~----------~~~s~~aq~~~-----~~ll~~~~~qr~~a~~~~e~k~~~~ 1094 (1205)
T KOG0606|consen 1034 ---PFNAETPQQIFENILN-RDIPWPEGP----------EEGSYEAQDLI-----NRLLTEEPTQRLGAKGAAEVKGHPF 1094 (1205)
T ss_pred ---CCCCcchhhhhhcccc-CCCCCCCCc----------cccChhhhhhh-----hhhhccCchhccCcccccccccCCc
Confidence 4444444444444432 222223221 23347888999 999999999999987 8889999
Q ss_pred cccCCCCCCCccCccccccCCCCCCC
Q psy7309 234 SLEGSSSGLSVLGSEQLLTCDHIPPP 259 (454)
Q Consensus 234 f~~~~~~~~~~~~~~~ll~~~~~~~~ 259 (454)
|.......+ .+..++++|..
T Consensus 1095 ~~~~~~~~l------~~q~~~~~p~~ 1114 (1205)
T KOG0606|consen 1095 FQDVDWENL------ALQKAEFVPQP 1114 (1205)
T ss_pred cCCCCcccc------ccccCccCCCC
Confidence 986544322 44455666654
No 470
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.82 E-value=4.3e-09 Score=100.40 Aligned_cols=46 Identities=24% Similarity=0.363 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309 6 RLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATN 51 (454)
Q Consensus 6 ~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~ 51 (454)
..+.||+.+|.+||++||+||||||+|||++.++.++|+|||.+..
T Consensus 146 ~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 146 EQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 3478999999999999999999999999999989999999998864
No 471
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.82 E-value=4.8e-09 Score=96.97 Aligned_cols=50 Identities=30% Similarity=0.464 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309 3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~ 52 (454)
.+.+++.+++.++.++|+.||+||||||+||+++.++.++|+|||.+...
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 45678999999999999999999999999999999999999999999754
No 472
>PRK10345 hypothetical protein; Provisional
Probab=98.79 E-value=4.5e-09 Score=98.12 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=38.7
Q ss_pred HHHHHHHHHHH-HHHHHcCCcccCCCCCcEEEccC----CCeEEecccchh
Q psy7309 5 WRLLREIIEGL-SHIHSQGIIHRDLKPVNIFIDYE----DHVKIGDFGLAT 50 (454)
Q Consensus 5 ~~i~~qil~gL-~~LH~~giiHrDLKp~NILl~~~----~~vKL~DFGla~ 50 (454)
..+++|++.++ +|||+++|+||||||+|||++.. +.++|+||+.+.
T Consensus 107 ~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 107 VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 45688999888 99999999999999999999743 379999955554
No 473
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.79 E-value=5.9e-09 Score=95.09 Aligned_cols=50 Identities=30% Similarity=0.438 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309 2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~ 52 (454)
++++.++.|++.++.++|. +||+|+||||+||+++ ++.++|+|||.|...
T Consensus 114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence 3578899999999999999 9999999999999999 899999999999754
No 474
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.64 E-value=3.9e-08 Score=91.47 Aligned_cols=47 Identities=38% Similarity=0.552 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATN 51 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~ 51 (454)
...++.+++.+|.++|+.|++|+|+||.|||++ ++.++|+|||++..
T Consensus 97 ~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 97 ELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 568999999999999999999999999999999 78899999998874
No 475
>KOG2137|consensus
Probab=98.62 E-value=2e-07 Score=98.00 Aligned_cols=201 Identities=16% Similarity=0.186 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCCCcCc
Q psy7309 9 REIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTSHTGQ 87 (454)
Q Consensus 9 ~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (454)
-++..||.|+|. .++||+.|.|++|.++.++..||+-|+.+........ .. .+.+.++ ..--.
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~----~p-~~~yd~~-----------lp~~~ 169 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE----YP-FSEYDPP-----------LPLLL 169 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc----cc-cccCCCC-----------CChhh
Confidence 345589999996 5899999999999999999999999998874321000 00 0001111 11112
Q ss_pred ccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCCchhh
Q psy7309 88 VGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTGSNVQ 167 (454)
Q Consensus 88 ~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~~~~~ 167 (454)
.-...|.|||++. ...-+... |++|+ |+++|.++.++-.-. ...+.+.....
T Consensus 170 ~~~~~f~apE~~~---~~~~~~~s--d~fSl--------------G~li~~i~~~gk~i~-------~a~~~~~~~~~-- 221 (700)
T KOG2137|consen 170 QPHLNFLAPEYLL---GTTNTPAS--DVFSL--------------GVLIYTIYNGGKSII-------AANGGLLSYSF-- 221 (700)
T ss_pred ccCcccccchhhc---cccccccc--cceee--------------eeEEEEEecCCcchh-------hccCCcchhhh--
Confidence 3346799999998 45555666 99999 999999884332110 00000000000
Q ss_pred hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCCCCccCc
Q psy7309 168 KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSGLSVLGS 247 (454)
Q Consensus 168 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~~~~~~~ 247 (454)
-..........+.. ...++..+=+ .++|..|+..||++.+++..|||....-.
T Consensus 222 --~~~~~~~~~~~~s~-------------~~p~el~~~l-----~k~l~~~~~~rp~~~~l~~~~ff~D~~~~------- 274 (700)
T KOG2137|consen 222 --SRNLLNAGAFGYSN-------------NLPSELRESL-----KKLLNGDSAVRPTLDLLLSIPFFSDPGLK------- 274 (700)
T ss_pred --hhcccccccccccc-------------cCcHHHHHHH-----HHHhcCCcccCcchhhhhcccccCCchhh-------
Confidence 00000011111111 2225666667 99999999999999999999999977665
Q ss_pred cccccCCCCCC-CCcchHHHHHHHHHHhcCCCChh
Q psy7309 248 EQLLTCDHIPP-PLVGETVLQDMVRQTLSNPQSKG 281 (454)
Q Consensus 248 ~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~ 281 (454)
.|..-+.+++ ...+...+-+.+..++..-....
T Consensus 275 -aLrfLD~l~~kdn~qKs~Flk~Ls~~ip~fp~rv 308 (700)
T KOG2137|consen 275 -ALRFLDDLPQKDNSQKSSFLKGLSKLIPTFPARV 308 (700)
T ss_pred -hhhhcccccccCcHHHHHHHHHHHHhhccCCHHH
Confidence 3333344444 23455566666666666555443
No 476
>KOG0195|consensus
Probab=98.61 E-value=3.2e-08 Score=92.86 Aligned_cols=147 Identities=20% Similarity=0.242 Sum_probs=93.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcC-Cc-ccCCCCCcEEEccCCCeEE--ecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309 2 GRAWRLLREIIEGLSHIHSQG-II-HRDLKPVNIFIDYEDHVKI--GDFGLATNILQKHAGPLARELTGYILPPIDSTAF 77 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~g-ii-HrDLKp~NILl~~~~~vKL--~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (454)
+++.+++.+++.|++|||+.. +| .--|....+++|.+-+.+| +|--++.
T Consensus 289 sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--------------------------- 341 (448)
T KOG0195|consen 289 SQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--------------------------- 341 (448)
T ss_pred chHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee---------------------------
Confidence 468899999999999999863 33 3357777888888766554 3322221
Q ss_pred ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309 78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE 157 (454)
Q Consensus 78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~ 157 (454)
...+..-.|.||+||.+++.....--..+ ||||+ .+++||+.+...
T Consensus 342 -----qe~gr~y~pawmspealqrkped~n~raa--dmwsf--------------aillwel~trev------------- 387 (448)
T KOG0195|consen 342 -----QEVGRAYSPAWMSPEALQRKPEDLNIRAA--DMWSF--------------AILLWELNTREV------------- 387 (448)
T ss_pred -----eccccccCcccCCHHHHhcCchhcchhhh--hHHHH--------------HHHHHHhhcccc-------------
Confidence 11223557899999999842111122344 99999 999999876433
Q ss_pred CCCCCCchhhhhhhh-hccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309 158 NGPSTGSNVQKSLQK-FQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL 229 (454)
Q Consensus 158 ~~p~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l 229 (454)
||.+.+..+.-.+ -..+-+..+|+.. +.....|+ .-|++-||.+||..+.++
T Consensus 388 --pfadlspmecgmkialeglrv~ippgi-------------s~hm~klm-----~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 388 --PFADLSPMECGMKIALEGLRVHIPPGI-------------SRHMNKLM-----NICMNEDPGKRPKFDMIV 440 (448)
T ss_pred --ccccCCchhhhhhhhhccccccCCCCc-------------cHHHHHHH-----HHHhcCCCCcCCCcceeh
Confidence 3333332222111 1123344455443 25666787 999999999999988554
No 477
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.58 E-value=5.2e-08 Score=89.80 Aligned_cols=45 Identities=40% Similarity=0.663 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309 6 RLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATN 51 (454)
Q Consensus 6 ~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~ 51 (454)
.++.|++.+|.+||+.|++|+|+||.||+++ ++.++++|||++..
T Consensus 94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 6899999999999999999999999999999 88999999999874
No 478
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.58 E-value=4.6e-08 Score=104.35 Aligned_cols=47 Identities=32% Similarity=0.553 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309 4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATN 51 (454)
Q Consensus 4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~ 51 (454)
...++.|++.+|.+||+.|++||||||+|||+ .++.++|+|||+|+.
T Consensus 430 ~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 430 NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 46789999999999999999999999999999 578899999999974
No 479
>PLN02837 threonine-tRNA ligase
Probab=98.55 E-value=2.8e-07 Score=99.35 Aligned_cols=143 Identities=10% Similarity=0.015 Sum_probs=113.0
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
|.-..+++.|++-+++...++||.+|.||.|.+.+++... .++||++.|.+++.++|||---.-++-+.+....
T Consensus 244 p~G~~l~~~L~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~y~l~p~~~p~~~~~~~~~~~ 323 (614)
T PLN02837 244 PKGAIVRHIIEDSWKKMHFEHGYDLLYTPHVAKADLWKTSGHLDFYKENMYDQMDIEDELYQLRPMNCPYHILVYKRKLH 323 (614)
T ss_pred chHHHHHHHHHHHHHHHHHHCCCEEEECCccCCHHHHhhcCCcccchhhcccccCCCCceEEECCCCcHHHHHHHhCccC
Confidence 6667789999999999999999999999999999987643 3689999998899999999766555655553211
Q ss_pred ---CCceeeEeecCccccCCCC--CC--ccceEEEEEEEEEcCCCC-cccHHHHHHHHHHHHHhCCCCCcEEEcCcc
Q psy7309 383 ---IVSMKRYCIDRVFRERRVL--GF--HPRELYECAFDIVTNTPG-VLTMGSLRRCLMGSFRRFNYGNISFAPHPR 451 (454)
Q Consensus 383 ---~~~~k~~y~g~vfR~~~~~--~g--~~rE~~Q~g~eiig~~~~-~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~ 451 (454)
.+|+|++.+|+|||++..+ .| |-|||.|.+.-++..+.. ...-.+++.+..++++.||+..+.+.++.|
T Consensus 324 SyrdLPlr~~~~~~~~R~E~~g~~~GL~RvreF~~~e~h~f~~~~q~~~e~~~~l~~~~~~~~~lg~~~~~~~~~t~ 400 (614)
T PLN02837 324 SYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILKQFGFSKYEINLSTR 400 (614)
T ss_pred ChhHCCHhhEeecccccCCCCCCCcCcccccceEECeEEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEecCC
Confidence 4899999999999997642 23 789999999999876521 122344777888999999997788887765
No 480
>cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. AspRS is a homodimer, which attaches a specific amino acid to the 3' OH group of ribose of the appropriate tRNA. The catalytic core domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. AspRS in this family differ from those found in the AsxRS family by a GAD insert in the core domain.
Probab=98.53 E-value=5.8e-07 Score=87.54 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEc--CCCCeEeeCCCCCHHHHHHHHHcCCCCceeeEee
Q psy7309 314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMT--RGGSIVTLPHDLRIPFARYLAQNGSIVSMKRYCI 391 (454)
Q Consensus 314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d--~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~y~ 391 (454)
+|..|...+++.|..+||.+|+||+|.....-.. .. |.+.. ..|....|+----+-.=|.++. .--|+||+
T Consensus 3 ~Rs~i~~~iR~f~~~~gfiEV~TP~L~~~~~~g~--~~-f~~~~~~~~~~~~~L~~Spql~lk~ll~~----g~~~v~~i 75 (280)
T cd00777 3 LRSRVIKAIRNFLDEQGFVEIETPILTKSTPEGA--RD-FLVPSRLHPGKFYALPQSPQLFKQLLMVS----GFDRYFQI 75 (280)
T ss_pred hHHHHHHHHHHHHHHCCCEEEeCCeeecCCCCCC--CC-ceeccccCCCceeecccCHHHHHHHHHhc----CcCcEEEe
Confidence 6889999999999999999999999976543211 11 33222 2344444553322222233332 23599999
Q ss_pred cCccccCCCCCCccceEEEEEEEEEcCC
Q psy7309 392 DRVFRERRVLGFHPRELYECAFDIVTNT 419 (454)
Q Consensus 392 g~vfR~~~~~~g~~rE~~Q~g~eiig~~ 419 (454)
|+|||.++.+.+|..||+|+++|+.+.+
T Consensus 76 ~~~fR~e~~~~~r~~Ef~~~e~e~~~~~ 103 (280)
T cd00777 76 ARCFRDEDLRADRQPEFTQIDIEMSFVD 103 (280)
T ss_pred ccceeCCCCCCCccceeEEeEeeeccCC
Confidence 9999999988899999999999998764
No 481
>KOG0601|consensus
Probab=98.53 E-value=1.6e-08 Score=104.50 Aligned_cols=159 Identities=27% Similarity=0.319 Sum_probs=106.7
Q ss_pred hHHHHHHHHHH----HHHHHHHcCCcccCCCCCcEEEccC-CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309 3 RAWRLLREIIE----GLSHIHSQGIIHRDLKPVNIFIDYE-DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF 77 (454)
Q Consensus 3 ~i~~i~~qil~----gL~~LH~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (454)
.+|..+.+.+. ||.++|..+|+|-|+||+||++..+ ..++++|||+...+.....
T Consensus 219 ~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~-------------------- 278 (524)
T KOG0601|consen 219 LLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNF-------------------- 278 (524)
T ss_pred hhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCcc--------------------
Confidence 57888889998 9999999999999999999999999 7899999999987643211
Q ss_pred ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309 78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE 157 (454)
Q Consensus 78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~ 157 (454)
...........|...|++||+.. ..++... |++|+ |.++.+...+-
T Consensus 279 ~~~~~~~~r~~~~~~Y~~ke~~~----~l~~~~~--di~sl--------------~ev~l~~~l~~-------------- 324 (524)
T KOG0601|consen 279 SSVFKVSKRPEGDCIYAAKELLN----GLATFAS--DIFSL--------------GEVILEAILGS-------------- 324 (524)
T ss_pred ccceeeeecCCCCceEeChhhhc----cccchHh--hhcch--------------hhhhHhhHhhc--------------
Confidence 01122223346778899999986 6678888 99999 77776621100
Q ss_pred CCCCCC--chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309 158 NGPSTG--SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL 235 (454)
Q Consensus 158 ~~p~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~ 235 (454)
..|..+ ..+.. .....+|... . ...+.+....+ ..|++.+|..|++++.+++|++..
T Consensus 325 ~~~~~g~~~~W~~-------~r~~~ip~e~--------~-~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 325 HLPSVGKNSSWSQ-------LRQGYIPLEF--------C-EGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIH 383 (524)
T ss_pred ccccCCCCCCccc-------cccccCchhh--------h-cCcchhhhhHH-----HHhcCcchhhhhHHHHHhcccccc
Confidence 001111 00000 0000111111 0 11113333456 899999999999999999999987
Q ss_pred c
Q psy7309 236 E 236 (454)
Q Consensus 236 ~ 236 (454)
+
T Consensus 384 s 384 (524)
T KOG0601|consen 384 S 384 (524)
T ss_pred c
Confidence 4
No 482
>TIGR00414 serS seryl-tRNA synthetase. This model represents the seryl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. The seryl-tRNA synthetases of two archaeal species, Methanococcus jannaschii and Methanobacterium thermoautotrophicum, differ considerably and are included in a different model.
Probab=98.52 E-value=6.4e-07 Score=92.14 Aligned_cols=138 Identities=9% Similarity=0.028 Sum_probs=107.9
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
|.-..+.+.|++-+.+.+.++||.+|.+|.|-+.+++... .+++|.+-| +.++|+|=--.|++-+.+..-.
T Consensus 170 p~g~~l~~aL~~~~~~~~~~~G~~~v~~P~lv~~~~~~~~G~~~~f~~~~y~i~~---~~~~L~pTsE~~~~~~~~~~i~ 246 (418)
T TIGR00414 170 NDGAKLERALINFMLDLLEKNGYQEIYPPYLVNEESLDGTGQLPKFEEDIFKLED---TDLYLIPTAEVPLTNLHRNEIL 246 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCccccccccceEecC---CCEEEEeCCcHHHHHHHhCcCC
Confidence 5666789999999999999999999999999999987543 268998854 4589999988999988764311
Q ss_pred ---CCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCC-CcccHHHHHHHHHHHHHhCCCCCcEEEcC
Q psy7309 383 ---IVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTP-GVLTMGSLRRCLMGSFRRFNYGNISFAPH 449 (454)
Q Consensus 383 ---~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~-~~~~d~e~~~~~~~~l~~~~~~~~~i~i~ 449 (454)
.+|+|+|.+|+|||.+....| |-|||.+...-++..+. +...-.+++.++.++++.||+.-..+.+.
T Consensus 247 s~~~LPlr~~~~s~~FR~E~g~~G~~t~GL~Rv~qF~k~E~~~f~~~e~s~~~~~~~~~~~~~i~~~Lglp~r~v~~~ 324 (418)
T TIGR00414 247 EEEELPIKYTAHSPCFRSEAGSYGKDTKGLIRVHQFNKVELVKFCKPEESAEELEEMTSDAEQILQELELPYRVVNLC 324 (418)
T ss_pred ChHhCCeeEEEEcccccCCCCccCCCCCccccccceeeeeEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCceEEEecC
Confidence 479999999999999764333 77999999998887652 22345557888999999999953334443
No 483
>PF01409 tRNA-synt_2d: tRNA synthetases class II core domain (F); InterPro: IPR002319 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. Phenylalanyl-tRNA synthetase (6.1.1.20 from EC) is an alpha2/beta2 tetramer composed of 2 subunits that belongs to class IIc. In eubacteria, a small subunit (pheS gene) can be designated as beta (E. coli) or alpha subunit (nomenclature adopted in InterPro). Reciprocally the large subunit (pheT gene) can be designated as alpha (E. coli) or beta (see IPR004531 from INTERPRO and IPR004532 from INTERPRO). In all other kingdoms the two subunits have equivalent length in eukaryota, and can be identified by specific signatures. The enzyme from Thermus thermophilus has an alpha 2 beta 2 type quaternary structure and is one of the most complicated members of the synthetase family. Identification of phenylalanyl-tRNA synthetase as a member of class II aaRSs was based only on sequence alignment of the small alpha-subunit with other synthetases [].; GO: 0000049 tRNA binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0043039 tRNA aminoacylation, 0005737 cytoplasm; PDB: 3TUP_A 3HFV_A 3CMQ_A 3TEG_A 2AKW_B 1B70_B 1B7Y_B 2ALY_B 2IY5_B 2AMC_B ....
Probab=98.46 E-value=7.7e-07 Score=84.91 Aligned_cols=126 Identities=16% Similarity=0.133 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCcccccc-ccc----------cccccEEEEcCCC---CeEeeCCCCCHHHHHHHH
Q psy7309 313 SLLESTGDKLRRIFQLHGGAHFQTPLLTPLNS-LTA----------TSETTASVMTRGG---SIVTLPHDLRIPFARYLA 378 (454)
Q Consensus 313 ~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~-~~~----------~~~~~~~~~d~~G---~~~~Lr~d~T~p~aR~~a 378 (454)
.-.+.++++++++|...||.++..|.++.... |.. ....+|-+.++.+ +..+||.-.|.-.+|.+.
T Consensus 17 hp~~~~~~~i~~~~~~~Gf~e~~~~~v~s~~~nFD~Ln~p~dHpaR~~~Dtfyi~~p~~~~~~~~vLRThts~~~~~~l~ 96 (247)
T PF01409_consen 17 HPITKFIREIRDIFVGMGFQEVEGPEVESEFYNFDALNIPQDHPARDMQDTFYISNPYSAEEDYSVLRTHTSPGQLRTLN 96 (247)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEESTTSEEEHHHHTGGGTSTTTSCGGCGTTSEBSCSSSBCECSSEEE-SSTHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHCCCeEeeCCeEEeeHHHHHhhCcCCCccccccccceeeeccccccchhhhhhhhhhHHHHHHHH
Confidence 35788999999999999999999999975332 211 1245677766654 789999999999999984
Q ss_pred HcCCCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC-CCC
Q psy7309 379 QNGSIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF-NYG 442 (454)
Q Consensus 379 ~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~-~~~ 442 (454)
.+. ..|.|.+++|+|||.+.....+..+|+|.+.=+++.. ..-.++..++.++++.+ |.+
T Consensus 97 ~~~-~~p~kif~iG~VyR~D~~D~th~~~f~Qleg~~~~~~---~~f~~Lk~~l~~l~~~lfG~~ 157 (247)
T PF01409_consen 97 KHR-PPPIKIFEIGKVYRRDEIDATHLPEFHQLEGLVVDKN---VTFEDLKGTLEELLKELFGID 157 (247)
T ss_dssp TTS-HSSEEEEEEEEEESSSCSBSSBESEEEEEEEEEEETT---E-HHHHHHHHHHHHHHHHTTT
T ss_pred Hhc-CCCeEEEecCceEecCCcccccCccceeEeeEEEecc---cchhHHHHHHHHHHHHHhhcc
Confidence 343 6899999999999998877888889999999888865 23455777777788888 875
No 484
>PRK04173 glycyl-tRNA synthetase; Provisional
Probab=98.45 E-value=1.4e-06 Score=90.68 Aligned_cols=143 Identities=10% Similarity=0.082 Sum_probs=102.1
Q ss_pred chhhHHHHHHHHHHHHHHHh--cCCccccCCCccccccccccc------cccEEEE------------------------
Q psy7309 309 SANFSLLESTGDKLRRIFQL--HGGAHFQTPLLTPLNSLTATS------ETTASVM------------------------ 356 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~--~G~~~i~tp~le~~~~~~~~~------~~~~~~~------------------------ 356 (454)
|.-..+++.|++.+++.|.. +||.+|+||.+.+.+++..++ +.||...
T Consensus 35 P~G~~l~~~i~~~~r~~~~~~~~~~~ev~tp~i~~~~l~~~SGH~~~f~d~m~~~~~~~~~~r~d~~~~~~~~~~~~~~~ 114 (456)
T PRK04173 35 PLGVELKNNIKRAWWKSFVQEREDVVGIDSPIIMPPEVWEASGHVDNFSDPLVECKKCKKRYRADHLIEELGIDAEGLSN 114 (456)
T ss_pred hhhHHHHHHHHHHHHHHHHhccCCEEEEeccccCCHHHHhhcCCccccCCceeEeCCCCCEeechhhhHHHhhhhccccH
Confidence 66678999999999999998 899999999999988875532 3444432
Q ss_pred ---------------------------------------cCCCCeEeeCCCCCHH----HHHHHHHcCCCCceeeEeecC
Q psy7309 357 ---------------------------------------TRGGSIVTLPHDLRIP----FARYLAQNGSIVSMKRYCIDR 393 (454)
Q Consensus 357 ---------------------------------------d~~G~~~~Lr~d~T~p----~aR~~a~~~~~~~~k~~y~g~ 393 (454)
+.++..+.|||+..-. +.+.+-.....+|+|++.+|+
T Consensus 115 ~~~~~~~~~~~m~cp~~~~~~~~~~~~f~l~f~~~~g~~~~~~~~~~lRpetaqg~~~~f~~~~~syr~dLPlr~aq~g~ 194 (456)
T PRK04173 115 EELKELIRENDIKCPECGGENWTEVRQFNLMFKTFIGPVEDSKSLGYLRPETAQGIFVNFKNVLRTARKKLPFGIAQIGK 194 (456)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCcCccchhhceeecccCccCCCcceeeccccchhHHHHHHHHHHhccccCCeeeeEEch
Confidence 1223345677765442 223222222158999999999
Q ss_pred ccccCC-CCCC--ccceEEEEEEEEEcCCCCc-ccHHHHHHHHHHHHHhCCCCCcEEEcCcc
Q psy7309 394 VFRERR-VLGF--HPRELYECAFDIVTNTPGV-LTMGSLRRCLMGSFRRFNYGNISFAPHPR 451 (454)
Q Consensus 394 vfR~~~-~~~g--~~rE~~Q~g~eiig~~~~~-~~d~e~~~~~~~~l~~~~~~~~~i~i~~~ 451 (454)
|||++. +..| |-|||.|..++|+..+... .--..++.++.+++..+|++.+.+++..+
T Consensus 195 ~~RnE~s~~~gL~RvReF~q~e~hiF~~peq~~~e~~~~l~~~~~~l~~lG~~~~~~~~s~~ 256 (456)
T PRK04173 195 SFRNEITPRNFIFRTREFEQMELEFFVKPGTDNEWFAYWIELRKNWLLDLGIDPENLRFREH 256 (456)
T ss_pred hHhCccCCCCCceeeceeeeeEEEEEECcChHHHHHHHHHHHHHHHHHHcCCCccceEEEec
Confidence 999975 3345 7799999999999875322 22344677889999999998777777654
No 485
>cd00496 PheRS_alpha_core Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain. PheRS belongs to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. While class II aaRSs generally aminoacylate the 3'-OH ribose of the appropriate tRNA, PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. PheRS is an alpha-2/ beta-2 tetramer.
Probab=98.41 E-value=5.1e-06 Score=78.15 Aligned_cols=119 Identities=19% Similarity=0.194 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCccccc-cccc---ccc-------ccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCC
Q psy7309 315 LESTGDKLRRIFQLHGGAHFQTPLLTPLN-SLTA---TSE-------TTASVMTRGGSIVTLPHDLRIPFARYLAQNGSI 383 (454)
Q Consensus 315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~-~~~~---~~~-------~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~ 383 (454)
.+.+.+++++++..+||.|+.|++|...+ .+.. ... ..+++.++- .-+||+.++..+.+.++.| .
T Consensus 3 ~~~~~~~ir~~L~~~Gf~Ev~tys~~~~~~~~~~~~~~~~~~~~~~~~~v~l~NP~--~~~LR~sLlp~LL~~l~~N--~ 78 (218)
T cd00496 3 LNKVIEEIEDIFVSMGFTEVEGPEVETDFYNFDALNIPQDHPARDMQDTFYINDPA--RLLLRTHTSAVQARALAKL--K 78 (218)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCcccccchhhhhcCCCCCCcccccCceEEECCCc--eEEEeccCcHHHHHHHHhc--C
Confidence 35678889999999999999999997662 2211 111 245666665 7899999999999999988 5
Q ss_pred CceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Q psy7309 384 VSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFN 440 (454)
Q Consensus 384 ~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~ 440 (454)
.+.|+|++|+|||.++...++..|+.+.++-+.|.. ....++..++..+++.+|
T Consensus 79 ~~~~lFEiG~Vf~~~~~~~~~~~E~~~l~~~~~g~~---~df~dlkg~ve~ll~~l~ 132 (218)
T cd00496 79 PPIRIFSIGRVYRNDEIDATHLPEFHQIEGLVVDKG---LTFADLKGTLEEFAKELF 132 (218)
T ss_pred CCeeEEEEcCeEECCCCCCCcCCccEEEEEEEECCC---CCHHHHHHHHHHHHHHhc
Confidence 799999999999986533344449999999999954 235666667777788887
No 486
>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated
Probab=98.41 E-value=3.8e-06 Score=82.86 Aligned_cols=126 Identities=13% Similarity=0.098 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCcccccc-ccc----------cccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLNS-LTA----------TSETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~-~~~----------~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
-...+.+.|+++|...||.++.+|.++.... |.. +...+|.+ ....+||.-.|.-.+|.++. .
T Consensus 109 Pl~~~~~~Ir~if~~mGF~ev~gpeIes~~~NFdaLn~P~dHPaR~~~DTfyI----~~~~lLRThTSp~qir~L~~-~- 182 (339)
T PRK00488 109 PITQTIEEIEDIFVGMGFEVAEGPEIETDYYNFEALNIPKDHPARDMQDTFYI----DDGLLLRTHTSPVQIRTMEK-Q- 182 (339)
T ss_pred HHHHHHHHHHHHHHhCCCEEEeCCccccHHHHHHHhCCCCCCcccccCceEEE----cCCceeeccCcHHHHHHHHh-c-
Confidence 5788999999999999999999999975332 211 11346666 34589999999999999886 3
Q ss_pred CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEEc
Q psy7309 383 IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFAP 448 (454)
Q Consensus 383 ~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~i 448 (454)
..|+|.+++|+|||.+.....|..+|+|...=+++.. ..-+++..++..+++.+.-.+..+++
T Consensus 183 ~~Pirif~~G~VyR~D~~DatH~~~FhQleglvvd~~---vtf~dLK~~L~~fl~~~fg~~~~~R~ 245 (339)
T PRK00488 183 KPPIRIIAPGRVYRNDSDDATHSPMFHQVEGLVVDKN---ISFADLKGTLEDFLKAFFGEDVKIRF 245 (339)
T ss_pred CCCeEEEEeeeEEEcCCCCcccCcceeeEEEEEEeCC---CCHHHHHHHHHHHHHHHcCCCCeEEe
Confidence 5899999999999998767889999999999999876 34577777888888877223455543
No 487
>PRK03991 threonyl-tRNA synthetase; Validated
Probab=98.38 E-value=2.2e-06 Score=91.91 Aligned_cols=137 Identities=11% Similarity=0.021 Sum_probs=107.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
|.-..+++.|.+-+.+.+.++||.+|.||.+...+..... .+++|.+ +.+++.++|||---.+.+-+......
T Consensus 224 P~G~~i~~~L~~~~~~~~~~~G~~~V~tP~~~~~~~~~~sgh~~~f~e~my~v-~~~~e~l~Lrp~~c~~~~~~~~~~~~ 302 (613)
T PRK03991 224 PKGRLIRDLLEDYVYNLVVELGAMPVETPIMYDLSHPAIREHADKFGERQYRV-KSDKKDLMLRFAACFGQFLMLKDMTI 302 (613)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCEEEECCeecChhHHhhcccccccchhceEe-cCCCceEEEecCCCHHHHHHHhCCcC
Confidence 6777799999999999999999999999998666554321 3689987 55578999999998888866553221
Q ss_pred ---CCceeeEeecC-ccccCCCC--CC--ccceEEEEEEEEEcCCCCccc---HHHHHHHHHHHHHhCCCCCcEEEc
Q psy7309 383 ---IVSMKRYCIDR-VFRERRVL--GF--HPRELYECAFDIVTNTPGVLT---MGSLRRCLMGSFRRFNYGNISFAP 448 (454)
Q Consensus 383 ---~~~~k~~y~g~-vfR~~~~~--~g--~~rE~~Q~g~eiig~~~~~~~---d~e~~~~~~~~l~~~~~~~~~i~i 448 (454)
.+|+|+|.+|+ +||++..+ .| |-|||+|-+.-++..+ ...+ -.+++.++.++++.||+. |.+.+
T Consensus 303 SyrdLPlr~~e~~~~~fR~E~~g~l~GL~RvReF~~~D~h~f~~~-~eqa~~e~~~~l~~~~~i~~~lGl~-~~~~~ 377 (613)
T PRK03991 303 SYKNLPLKMYELSTYSFRLEQRGELVGLKRLRAFTMPDMHTLCKD-MEQAMEEFEKQYEMILETGEDLGRD-YEVAI 377 (613)
T ss_pred chhhCChhhheecchheeCCCCCCCcCcccccceEeeeEEEEECC-HHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe
Confidence 48999999999 99998643 23 7899999999999874 2333 344778889999999984 66654
No 488
>TIGR00468 pheS phenylalanyl-tRNA synthetase, alpha subunit. Most phenylalanyl-tRNA synthetases are heterodimeric, with 2 alpha (pheS) and 2 beta (pheT) subunits. This model describes the alpha subunit, which shows some similarity to class II aminoacyl-tRNA ligases. Mitochondrial phenylalanyl-tRNA synthetase is a single polypeptide chain, active as a monomer, and similar to this chain rather than to the beta chain, but excluded from this model. An interesting feature of the alignment of all sequences captured by this model is a deep split between non-spirochete bacterial examples and all other examples; supporting this split is a relative deletion of about 50 residues in the former set between two motifs well conserved throughout the alignment.
Probab=98.37 E-value=3.6e-06 Score=82.62 Aligned_cols=121 Identities=17% Similarity=0.158 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCcccc-cccc---ccc-------cccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 314 LLESTGDKLRRIFQLHGGAHFQTPLLTPL-NSLT---ATS-------ETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~-~~~~---~~~-------~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
-...+.++++++|...||.++.+|.|+.. ..+. ... ..++.+. +..+||+.++..+.|.++.|.+
T Consensus 73 p~~~~~~~ir~~l~~~Gf~Ev~~~~~~s~~~~fd~l~~~~~hpar~~~d~~~l~----d~~vLRtsl~p~ll~~l~~N~~ 148 (294)
T TIGR00468 73 PLTRVIDEIRDIFLGLGFTEEKGPEVETDFWNFDALNIPQDHPARDMQDTFYIK----DRLLLRTHTTAVQLRTMEENEK 148 (294)
T ss_pred HHHHHHHHHHHHHHHCCCEEeeCCceeccHHHHHHhCCCCCCcchhhccceeec----CCcceecccHHHHHHHHHhcCC
Confidence 46788899999999999999999999876 2221 111 1445554 4678999999999999998753
Q ss_pred CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCC
Q psy7309 383 IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYG 442 (454)
Q Consensus 383 ~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~ 442 (454)
.|.|+|.+|+|||.+.....+..||.|.++-+++.. ..-.++-.++..++..+|++
T Consensus 149 -~pirlFEiGrVfr~d~~d~~~~pef~ql~gl~~~~~---~~f~dLKg~le~ll~~l~~~ 204 (294)
T TIGR00468 149 -PPIRIFSPGRVFRNDTVDATHLPEFHQVEGLVIDKN---VSFTNLKGFLEEFLKKMFGE 204 (294)
T ss_pred -CCceEEEecceEEcCCCCCccCChhhEEEEEEECCC---CCHHHHHHHHHHHHHHhCCC
Confidence 899999999999986533344449999988888843 23566777777788888874
No 489
>cd00776 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class II core domain. Assignment to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs in the core domain. This family includes AsnRS as well as a subgroup of AspRS. AsnRS and AspRS are homodimers, which attach either asparagine or aspartate to the 3'OH group of ribose of the appropriate tRNA. While archaea lack asnRS, they possess a non-discriminating aspRS, which can mischarge Asp-tRNA with Asn. Subsequently, a tRNA-dependent aspartate amidotransferase converts the bound aspartate to asparagine. The catalytic core domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate.
Probab=98.35 E-value=2.3e-06 Score=85.19 Aligned_cols=102 Identities=18% Similarity=0.172 Sum_probs=75.9
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeE
Q psy7309 310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRY 389 (454)
Q Consensus 310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~ 389 (454)
.-+.++.+|.+.+++.|.++||.+|+||+|+....= ...+.|++ +--|+.+-|+--.-+-.=+.++. --|.|
T Consensus 22 ~~~~~rs~i~~~ir~~f~~~gf~eV~TP~l~~~~~e--~~~~~f~~-~~~~~~~yL~~Spql~lk~l~~~-----~~~vf 93 (322)
T cd00776 22 AIFRIRSEVLRAFREFLRENGFTEVHTPKITSTDTE--GGAELFKV-SYFGKPAYLAQSPQLYKEMLIAA-----LERVY 93 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEeeCCceecCCCC--ccCCcccc-ccCCCcceecCCHHHHHHHHHHh-----hhhhE
Confidence 344589999999999999999999999999985431 22344544 44567777775555555554442 34999
Q ss_pred eecCccccCCCCC-CccceEEEEEEEEEcCC
Q psy7309 390 CIDRVFRERRVLG-FHPRELYECAFDIVTNT 419 (454)
Q Consensus 390 y~g~vfR~~~~~~-g~~rE~~Q~g~eiig~~ 419 (454)
++|+|||.+.... .|..||+++.+|..+..
T Consensus 94 ~i~~~FR~E~~~~~rHl~EFtmlE~e~~~~~ 124 (322)
T cd00776 94 EIGPVFRAEKSNTRRHLSEFWMLEAEMAFIE 124 (322)
T ss_pred EeccccccCCCCcCCCcceeeccceeeeccC
Confidence 9999999976443 57789999999999874
No 490
>PRK05431 seryl-tRNA synthetase; Provisional
Probab=98.30 E-value=5.4e-06 Score=85.53 Aligned_cols=138 Identities=11% Similarity=0.055 Sum_probs=105.7
Q ss_pred chhhHHHHHHHHHHHHHHH-hcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcC
Q psy7309 309 SANFSLLESTGDKLRRIFQ-LHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNG 381 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~-~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~ 381 (454)
|.-..+.+.|++-+.+... ++||.+|.+|.|.+.+++... .+++|++- ++.++|+|=--.|++-+.+..-
T Consensus 167 p~ga~L~~aL~~~~~~~~~~~~G~~ev~~P~lv~~~~~~~~G~~~~f~~~ly~i~---~~~~~L~pTsE~~l~~l~~~~~ 243 (425)
T PRK05431 167 GDGARLERALIQFMLDLHTEEHGYTEVIPPYLVNEESMYGTGQLPKFEEDLYKIE---DDDLYLIPTAEVPLTNLHRDEI 243 (425)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCEEEeccccccHHHHhhcCccccchhhceEec---CCCEEEEeCCcHHHHHHHhccc
Confidence 4555678888888777777 999999999999999987543 26799884 4679999999999998877432
Q ss_pred C---CCceeeEeecCccccCCCCC-----C--ccceEEEEEEEEEcCCC-CcccHHHHHHHHHHHHHhCCCCCcEE-EcC
Q psy7309 382 S---IVSMKRYCIDRVFRERRVLG-----F--HPRELYECAFDIVTNTP-GVLTMGSLRRCLMGSFRRFNYGNISF-APH 449 (454)
Q Consensus 382 ~---~~~~k~~y~g~vfR~~~~~~-----g--~~rE~~Q~g~eiig~~~-~~~~d~e~~~~~~~~l~~~~~~~~~i-~i~ 449 (454)
. .+|+|+|.++++||++.... | |.|||.+...-++..+. +...-.+++.++.++++.||+. |.+ .+.
T Consensus 244 ~s~~dLPlr~~~~s~~fR~Eag~~g~~~~GL~Rv~qF~k~E~~~f~~~e~s~~~~~~~l~~~~~i~~~Lglp-yr~v~~~ 322 (425)
T PRK05431 244 LDEEELPLKYTAYSPCFRSEAGSAGRDTRGLIRVHQFDKVELVKFTKPEDSYAELEELTANAEEILQKLELP-YRVVLLC 322 (425)
T ss_pred CCHHhCCeeEEEEcCEecCCCCcCCCCCCceeeeeeeeeeeEEEEECHHHHHHHHHHHHHHHHHHHHHcCCc-EEEEEcC
Confidence 1 47999999999999976432 3 67899999888887652 2234455788899999999995 444 443
Q ss_pred c
Q psy7309 450 P 450 (454)
Q Consensus 450 ~ 450 (454)
.
T Consensus 323 s 323 (425)
T PRK05431 323 T 323 (425)
T ss_pred C
Confidence 3
No 491
>KOG1266|consensus
Probab=98.29 E-value=5.3e-07 Score=87.08 Aligned_cols=159 Identities=20% Similarity=0.278 Sum_probs=97.5
Q ss_pred hHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 3 RAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
.-++|+-||+.||.|||++. |+|..+...-|++..+|-+||+--.-..... +.+...
T Consensus 177 ~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~---------------------s~~~~~ 235 (458)
T KOG1266|consen 177 AWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP---------------------SVNSTR 235 (458)
T ss_pred HHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccch---------------------hhhhhh
Confidence 35789999999999999985 9999999999999999988875321111000 000011
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP 160 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p 160 (454)
........|-++|.|||.-. ...-+..+ |||++ |....||.-+.. . |
T Consensus 236 ~~Ek~~~~~~~g~~a~~sg~---~tn~~~a~--dIy~f--------------gmcAlemailEi-------------q-~ 282 (458)
T KOG1266|consen 236 EAEKSVNTSLPGFSAPESGT---TTNTTGAS--DIYKF--------------GMCALEMAILEI-------------Q-S 282 (458)
T ss_pred HhhhhccccCCccccCCcCc---ccccccch--hhhhh--------------hHHHHHHHHhee-------------c-c
Confidence 11222345667899999843 23334444 99999 866666422111 0 0
Q ss_pred CCCc---hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309 161 STGS---NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG 237 (454)
Q Consensus 161 ~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~ 237 (454)
..+. ..+....+... .........++ ..||+-.|..||+|++++.||..-+.
T Consensus 283 tnseS~~~~ee~ia~~i~--------------------~len~lqr~~i-----~kcl~~eP~~rp~ar~llfHpllfeV 337 (458)
T KOG1266|consen 283 TNSESKVEVEENIANVII--------------------GLENGLQRGSI-----TKCLEGEPNGRPDARLLLFHPLLFEV 337 (458)
T ss_pred CCCcceeehhhhhhhhee--------------------eccCccccCcC-----cccccCCCCCCcchhhhhcCceeeec
Confidence 0000 01111111100 01124445677 99999999999999999999987766
Q ss_pred CCC
Q psy7309 238 SSS 240 (454)
Q Consensus 238 ~~~ 240 (454)
...
T Consensus 338 hsl 340 (458)
T KOG1266|consen 338 HSL 340 (458)
T ss_pred chH
Confidence 553
No 492
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.26 E-value=9.3e-07 Score=76.33 Aligned_cols=49 Identities=27% Similarity=0.344 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHHHHc---CCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309 3 RAWRLLREIIEGLSHIHSQ---GIIHRDLKPVNIFIDYEDHVKIGDFGLATN 51 (454)
Q Consensus 3 ~i~~i~~qil~gL~~LH~~---giiHrDLKp~NILl~~~~~vKL~DFGla~~ 51 (454)
....++.+++.+|+++|.. +++|+|+||+||+++..+.++++|||.+..
T Consensus 87 ~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 87 EKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 3467889999999999984 799999999999999989999999999874
No 493
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.19 E-value=1.6e-06 Score=79.81 Aligned_cols=49 Identities=12% Similarity=0.218 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHHH-HHcCCcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309 3 RAWRLLREIIEGLSHI-HSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNI 52 (454)
Q Consensus 3 ~i~~i~~qil~gL~~L-H~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~ 52 (454)
++..+..|++.+|..+ |+.||||+||+|.|||++ ++.+.|+|||.|...
T Consensus 125 ~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 125 EMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 3567789999999998 899999999999999997 577999999988744
No 494
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=98.19 E-value=5.4e-06 Score=86.03 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=88.4
Q ss_pred HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCe
Q psy7309 289 CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSI 362 (454)
Q Consensus 289 ~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~ 362 (454)
+-.++..+.--++ |--+.++++|.+.+++-+.+.|++++--|+|.|.++-..+ ++++|++.|.+++.
T Consensus 31 ~i~~~~~G~y~~l-------P~g~rv~~kI~~iir~em~~~G~~Evl~P~L~p~eLwkEs~r~~~f~~El~~v~drg~~~ 103 (500)
T COG0442 31 MIRKPVKGLYVWL-------PLGLRVLEKIENIIREEMDKIGAQEVLFPTLIPAELWKESGRWEGFGPELFRVKDRGDRP 103 (500)
T ss_pred ceecccCceEEEC-------ccHHHHHHHHHHHHHHHHHhcCceEEechhcCHHHHHHHhChhhhcchhhEEEEccCCce
Confidence 3344444444444 8888899999999999999999999999999995543332 37899999999999
Q ss_pred EeeCCCCCHHHHHH----HHHcCCCCceeeEeecCccccCCC-CC--CccceEEEEEE
Q psy7309 363 VTLPHDLRIPFARY----LAQNGSIVSMKRYCIDRVFRERRV-LG--FHPRELYECAF 413 (454)
Q Consensus 363 ~~Lr~d~T~p~aR~----~a~~~~~~~~k~~y~g~vfR~~~~-~~--g~~rE~~Q~g~ 413 (454)
++|||-----|.-+ +.+.. .+|+++|++.++||++.. .. -|.|||+--+.
T Consensus 104 l~L~PTsEe~it~~~~~~i~SYk-dLPl~lYQi~~kfRdE~rpr~gllR~REF~mkda 160 (500)
T COG0442 104 LALRPTSEEVITDMFRKWIRSYK-DLPLKLYQIQSKFRDEKRPRFGLLRGREFLMKDA 160 (500)
T ss_pred eeeCCCcHHHHHHHHHHHhhhhh-hCCcceeeeeeEEeccccCCCCccchheeeeccc
Confidence 99999654433333 43444 799999999999999653 22 46789974433
No 495
>PLN02678 seryl-tRNA synthetase
Probab=98.13 E-value=1.3e-05 Score=82.66 Aligned_cols=133 Identities=11% Similarity=0.047 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc---CC
Q psy7309 312 FSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQN---GS 382 (454)
Q Consensus 312 ~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~---~~ 382 (454)
..+...+.+-+.+....+||.+|.||.|...+++... .+++|++.+. |..+.|-+=.-+|++=+.+.. ..
T Consensus 174 a~L~~AL~~y~ld~~~~~Gy~~V~~P~lv~~~~~~~sG~~~~f~e~my~i~~~-~~~~yLi~TaE~~l~~~h~~~~~s~~ 252 (448)
T PLN02678 174 VLLNQALINFGLAFLRKRGYTPLQTPFFMRKDVMAKCAQLAQFDEELYKVTGE-GDDKYLIATSEQPLCAYHRGDWIDPK 252 (448)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEECcccccHHHHhhcCCcccchhcCceecCC-CCceeeecccccccChHHhcccCCHH
Confidence 4577788888889999999999999999998887543 3689998543 345556652223555443311 11
Q ss_pred CCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCC---CcccHHHHHHHHHHHHHhCCCCCcEE
Q psy7309 383 IVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTP---GVLTMGSLRRCLMGSFRRFNYGNISF 446 (454)
Q Consensus 383 ~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~---~~~~d~e~~~~~~~~l~~~~~~~~~i 446 (454)
.+|+|++.++.|||++....| |-|+|.+...=.+..+. +...-.|++..+.++|..||+ .|.+
T Consensus 253 eLPlr~~~~s~cfR~Eags~G~~~~GL~RvhqF~KvE~f~~~~pe~~~s~~~~e~~l~~~~~i~~~L~l-pyrv 325 (448)
T PLN02678 253 ELPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNESWEMHEEMLKNSEDFYQSLGI-PYQV 325 (448)
T ss_pred hCCceeEEeccccccccccCCCcCCcceEEEEEEEEEEEEEECCCchhHHHHHHHHHHHHHHHHHHcCC-CeEE
Confidence 489999999999999865434 35799887765554442 234456789999999999998 4776
No 496
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.12 E-value=3.1e-06 Score=75.52 Aligned_cols=46 Identities=28% Similarity=0.379 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHcCC-----cccCCCCCcEEEccCCCeEEecccchhh
Q psy7309 5 WRLLREIIEGLSHIHSQGI-----IHRDLKPVNIFIDYEDHVKIGDFGLATN 51 (454)
Q Consensus 5 ~~i~~qil~gL~~LH~~gi-----iHrDLKp~NILl~~~~~vKL~DFGla~~ 51 (454)
..++.+++.+|+.||+.++ +|+|+||.||+++ ++.++++|||.|..
T Consensus 86 ~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 86 PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 4567899999999999885 9999999999999 67899999998863
No 497
>KOG0601|consensus
Probab=98.09 E-value=1.7e-06 Score=89.71 Aligned_cols=50 Identities=40% Similarity=0.591 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-CCeEEecccchhh
Q psy7309 2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-DHVKIGDFGLATN 51 (454)
Q Consensus 2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~ 51 (454)
...+++..|++.++.++|++.++|+|+||+||++..+ +..+++|||.++.
T Consensus 366 ~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 366 DPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred chhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence 3678999999999999999999999999999999886 6789999999874
No 498
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=98.08 E-value=9.9e-06 Score=85.67 Aligned_cols=142 Identities=11% Similarity=0.082 Sum_probs=111.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccc------cccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309 309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATS------ETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS 382 (454)
Q Consensus 309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~------~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~ 382 (454)
|.-..+++.+.+-++.....+||.+|.||.+...+....++ ++||.+.. .++.++|||=--.--+..+.....
T Consensus 217 pkG~~ir~~le~y~~~~~~~~Gy~~V~TP~~~~~~l~~~SGH~~~y~e~mf~~~~-~~~~~~lKpmNCpgh~~ifk~~~~ 295 (589)
T COG0441 217 PKGATIRNLLEDYVRTKLRSYGYQEVKTPVLADLELWELSGHWDNYKEDMFLTES-DDREYALKPMNCPGHILIFKSGLR 295 (589)
T ss_pred CCcccHHHHHHHHHHHHHHhcCceEecCCeeeecccchhccchhhccccceeecc-CChhheeeeccCHhHHHHHhcCCc
Confidence 45556899999999999999999999999999988875542 67887754 349999999777777666554321
Q ss_pred ---CCceeeEeecCccccCCCCC--C--ccceEEEEEEEEEcCCCCcc-cHHHHHHHHHHHHHhCCCCCcEEEcCcc
Q psy7309 383 ---IVSMKRYCIDRVFRERRVLG--F--HPRELYECAFDIVTNTPGVL-TMGSLRRCLMGSFRRFNYGNISFAPHPR 451 (454)
Q Consensus 383 ---~~~~k~~y~g~vfR~~~~~~--g--~~rE~~Q~g~eiig~~~~~~-~d~e~~~~~~~~l~~~~~~~~~i~i~~~ 451 (454)
..|+|++.+|.|||++..+. | |.|+|+|=+.-|+...+-.. --.+++.++.++++.+|+.+|.+++..|
T Consensus 296 SYR~LP~r~~E~g~v~R~E~SGal~GL~RvR~ftqdDaHifc~~dQi~~E~~~~~~~i~~v~~~fg~~~y~~~ls~r 372 (589)
T COG0441 296 SYRELPLRLAEFGYVYRYEKSGALHGLMRVRGFTQDDAHIFCTPDQIKDEFKGILELILEVYKDFGFTDYEVKLSTR 372 (589)
T ss_pred ceeccchhhhhcceeecccCcchhhccccccceeecccceeccHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 48999999999999987543 5 89999999999998731221 2334677888888999999899998776
No 499
>PF00152 tRNA-synt_2: tRNA synthetases class II (D, K and N) ; InterPro: IPR004364 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This entry includes the asparagine, aspartic acid and lysine tRNA synthetases.; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 1N9W_B 1BBU_A 1BBW_A 4EX5_B 3E9I_A 3E9H_C 3A74_C 1NNH_A 3M4P_C 3M4Q_B ....
Probab=98.05 E-value=4e-05 Score=76.93 Aligned_cols=104 Identities=18% Similarity=0.198 Sum_probs=76.2
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEE----cCCCCeEeeCCCCCHHHHHHHHHcCCCCc
Q psy7309 310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVM----TRGGSIVTLPHDLRIPFARYLAQNGSIVS 385 (454)
Q Consensus 310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~----d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~ 385 (454)
..+.+|..|.+.+++.|...||.+|.||.|.....-. ..+.|.+. +--|+.+-|+.--=+-.-+.++.. -
T Consensus 20 ~~~~~rs~i~~~ir~ff~~~~f~Ev~tP~l~~~~~~~--~~~~F~v~~~~~~~~~~~~~L~~Spql~~k~ll~~g----~ 93 (335)
T PF00152_consen 20 SILRIRSAILQAIREFFDKRGFIEVDTPILTSSTCEG--GAEPFSVDSEPGKYFGEPAYLTQSPQLYLKRLLAAG----L 93 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-EEE---SEESSSSSS--SSCSEEEEESTTEETTEEEEE-SSSHHHHHHHHHTT----H
T ss_pred HHHHHHHHHHHHHHHHHHhCCceEEcCceeeccccCc--cccccccccchhhhcccceecCcChHHHHhhhcccc----c
Confidence 3456899999999999999999999999998876432 35678776 246677788877666666666532 3
Q ss_pred eeeEeecCccccCCC-CCCccceEEEEEEEEEcCC
Q psy7309 386 MKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNT 419 (454)
Q Consensus 386 ~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~ 419 (454)
-|.|+||+|||.+.. ..-|.-||+|+.+|..+.+
T Consensus 94 ~~vf~i~~~FR~E~~~~~rHl~EFtmLE~e~a~~~ 128 (335)
T PF00152_consen 94 ERVFEIGPCFRNEESRTRRHLPEFTMLEWEMAFAD 128 (335)
T ss_dssp SEEEEEEEEE-BSSSCBTTBSSEEEEEEEEEETSS
T ss_pred hhhhheecceeccCcccccchhhhhhhhhccccCc
Confidence 499999999999876 5566779999999998876
No 500
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.05 E-value=8.7e-06 Score=81.36 Aligned_cols=103 Identities=17% Similarity=0.282 Sum_probs=78.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309 1 MGRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH 80 (454)
Q Consensus 1 ~~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (454)
|+-+.+..+.++.+.+.||..|.+-+|+.++|+|+++++.|.|.|=..-. +. ..
T Consensus 116 w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq-i~-------------------------~n 169 (637)
T COG4248 116 WDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ-IN-------------------------AN 169 (637)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee-ec-------------------------cC
Confidence 45578899999999999999999999999999999999999998854322 10 23
Q ss_pred CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeee-ecCCc
Q psy7309 81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAE-VYKDR 143 (454)
Q Consensus 81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~e-l~~~~ 143 (454)
+......+|.+.|.+||...-..-.+.+.....|-|.| |+++|+ +++|+
T Consensus 170 g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGL--------------avLiF~lL~ggr 219 (637)
T COG4248 170 GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGL--------------AVLIFHLLFGGR 219 (637)
T ss_pred CceEecccCccccCCHHHhccccccccCCCccccchhH--------------HHHHHHHHhcCC
Confidence 45566779999999999865332333333333499999 999999 44534
Done!